316 200 0 0 chr17 1 56 -85438424 - Alu SINE Alu -247 55 1 2325 82 10 0 chr17 66 371 -85438109 - AluSx SINE Alu -4 308 1 2014 121 3 16 chr17 684 851 -85437629 - AluJb SINE Alu -11 301 138 2138 105 3 7 chr17 851 1156 -85437324 - AluY SINE Alu -7 304 1 2014 121 3 16 chr17 1156 1293 -85437187 - AluJb SINE Alu -174 138 1 1874 101 0 8 chr17 1441 1698 -85436782 - AluSx SINE Alu -57 255 1 223 278 0 0 chr17 1990 2044 -85436436 - L2 LINE L2 -2 3270 3217 2232 106 3 0 chr17 2215 2516 -85435964 + AluSx SINE Alu 1 302 -10 210 333 42 0 chr17 3102 3198 -85435282 + MIR3 SINE MIR 109 208 0 485 294 63 50 chr17 3461 3517 -85434963 - MIR SINE MIR 0 262 208 2202 91 0 10 chr17 3517 3825 -85434655 - AluY SINE Alu -6 305 1 485 294 63 50 chr17 3825 3989 -85434491 - MIR SINE MIR -54 208 39 1523 97 0 18 chr17 4525 4752 -85433728 - AluSg SINE Alu -87 223 1 1310 130 0 5 chr17 5897 6097 -85432383 + AluSq SINE Alu 30 228 -85 2390 54 0 0 chr17 6797 7095 -85431385 - AluY SINE Alu -13 298 1 2368 67 13 13 chr17 7342 7518 -85430962 - AluSx SINE Alu 0 312 134 2051 120 3 7 chr17 7518 7826 -85430654 - AluSp SINE Alu -6 307 1 2368 67 13 13 chr17 7826 7961 -85430519 - AluSx SINE Alu -177 135 1 1099 178 30 26 chr17 8073 8127 -85430353 + AluJo SINE Alu 78 130 -182 2381 67 3 3 chr17 8127 8427 -85430053 + AluSp SINE Alu 1 300 -13 1099 178 30 26 chr17 8427 8603 -85429877 + AluJo SINE Alu 130 309 -3 1680 90 0 25 chr17 9739 9983 -85428497 - AluSg/x SINE Alu -5 307 70 1633 129 4 0 chr17 10083 10323 -85428157 + AluSx SINE Alu 54 294 -18 208 293 0 0 chr17 10460 10518 -85427962 - L2 LINE L2 -638 2676 2619 837 141 7 28 chr17 10526 10668 -85427812 + AluJo SINE Alu 1 139 -173 1607 148 0 76 chr17 10670 10811 -85427669 + AluJo SINE Alu 5 110 -202 2460 42 0 0 chr17 10811 11100 -85427380 + AluY SINE Alu 5 293 -18 1607 148 0 76 chr17 11100 11275 -85427205 + AluJo SINE Alu 110 297 -15 293 174 153 41 chr17 11401 11418 -85427062 + MER5A DNA MER1_type 1 15 -174 1963 118 20 14 chr17 11418 11715 -85426765 + AluSx SINE Alu 3 301 -11 293 174 153 41 chr17 11715 11795 -85426685 + MER5A DNA MER1_type 15 109 -80 980 98 0 0 chr17 12385 12517 -85425963 - AluSq/x SINE Alu -181 132 1 228 160 9 66 chr17 13843 13949 -85424531 + GA-rich Low_complexity Low_complexity 2 101 0 264 287 46 11 chr17 14105 14192 -85424288 + L1MC/D LINE L1 5576 5665 -2143 479 204 0 11 chr17 14195 14288 -85424192 - MER8 DNA MER2_type 0 239 148 2172 100 0 7 chr17 14289 14588 -85423892 + AluSx SINE Alu 1 297 -15 997 67 0 30 chr17 14761 14896 -85423584 + AluY SINE Alu 1 131 -180 2117 84 40 7 chr17 14898 15195 -85423285 + AluY SINE Alu 1 307 -4 285 248 28 9 chr17 15200 15309 -85423171 + L1M4 LINE L1 4499 4609 -1537 2038 112 7 0 chr17 16100 16396 -85422084 - AluSx SINE Alu -14 298 1 1057 81 7 0 chr17 16738 16874 -85421606 - AluSq/x SINE Alu -176 137 1 2384 67 0 16 chr17 16986 17302 -85421178 - AluY SINE Alu 0 311 1 275 158 0 4 chr17 17302 17361 -85421119 - Alu SINE Alu -255 44 1 21 0 0 0 chr17 17630 17651 -85420829 + AT_rich Low_complexity Low_complexity 1 21 0 1230 64 0 0 chr17 18518 18675 -85419805 + AluSq SINE Alu 1 157 -156 632 256 12 12 chr17 19023 19183 -85419297 - MER5A DNA MER1_type -29 160 1 2127 111 0 0 chr17 19307 19604 -85418876 - AluSx SINE Alu -15 297 1 2487 53 3 0 chr17 19609 19911 -85418569 - AluY SINE Alu -8 303 1 23 0 0 0 chr17 19911 19934 -85418546 + AT_rich Low_complexity Low_complexity 1 23 0 804 147 0 0 chr17 19989 20118 -85418362 - AluSc SINE Alu -5 304 176 867 68 17 0 chr17 20219 20337 -85418143 + AluY SINE Alu 181 300 -11 243 88 0 0 chr17 20717 20751 -85417729 + (GGGAGA)n Simple_repeat Simple_repeat 3 36 0 712 75 0 0 chr17 20827 20921 -85417559 - AluY SINE Alu -14 297 204 1792 89 0 0 chr17 20921 21156 -85417324 - AluSc SINE Alu -74 235 1 388 244 16 11 chr17 21443 21569 -85416911 + MIR SINE MIR 104 229 -33 375 192 83 154 chr17 22071 22140 -85416340 - MER2 DNA MER2_type 0 345 273 2129 112 0 0 chr17 22140 22444 -85416036 + AluSx SINE Alu 1 304 -8 1890 118 13 41 chr17 22445 22759 -85415721 + AluSx SINE Alu 1 305 -7 375 192 83 154 chr17 22759 22927 -85415553 - MER2 DNA MER2_type -71 274 123 438 148 28 46 chr17 22928 23036 -85415444 + L1MA4 LINE L1 6195 6300 0 445 235 52 52 chr17 23073 23209 -85415271 - MER2 DNA MER2_type -209 136 1 201 231 62 0 chr17 23258 23323 -85415157 - MER5B DNA MER1_type -106 72 4 1906 144 3 7 chr17 23870 24169 -85414311 - AluSx SINE Alu -14 298 1 311 256 31 62 chr17 24171 24300 -85414180 - HAL1 LINE L1 -583 1924 1800 780 263 85 18 chr17 25007 25288 -85413192 - MER102b DNA MER1_type 0 341 42 493 343 52 45 chr17 25413 25460 -85413020 - L3 LINE CR1 -860 717 672 2196 111 0 0 chr17 25460 25767 -85412713 - AluSx SINE Alu -5 307 1 493 343 52 45 chr17 25767 26005 -85412475 - L3 LINE CR1 -905 672 430 1485 165 104 4 chr17 26715 26994 -85411486 - AluJo SINE Alu -5 307 1 212 261 0 0 chr17 26998 27044 -85411436 + T-rich Low_complexity Low_complexity 5 50 0 1911 128 0 42 chr17 27456 27768 -85410712 + AluSx SINE Alu 1 299 -13 182 36 0 36 chr17 27960 27988 -85410492 + (CGGGGG)n Simple_repeat Simple_repeat 2 28 0 2123 54 0 0 chr17 29443 29701 -85408779 + AluSx SINE Alu 39 296 -16 1389 137 82 4 chr17 29957 30190 -85408290 + AluJo SINE Alu 14 264 -48 2116 111 0 10 chr17 30368 30666 -85407814 + AluSx SINE Alu 1 295 -17 2000 151 0 0 chr17 32040 32351 -85406129 - AluSx SINE Alu -1 311 1 447 71 0 0 chr17 32351 32407 -85406073 - AluSq/x SINE Alu -177 135 80 1420 142 0 0 chr17 32409 32621 -85405859 - AluSq SINE Alu -101 212 1 268 348 68 59 chr17 32747 32983 -85405497 - L2 LINE L2 -8 3264 3027 1954 112 18 3 chr17 33099 33385 -85405095 - AluSg SINE Alu -20 290 1 1712 165 34 3 chr17 33443 33734 -85404746 - AluJb SINE Alu -10 302 3 559 149 0 26 chr17 34809 34977 -85403503 + AluSq SINE Alu 1 206 -107 2099 110 3 0 chr17 35184 35476 -85403004 - AluSx SINE Alu -19 293 1 2030 119 10 0 chr17 35479 35772 -85402708 - AluSq SINE Alu -17 296 1 267 31 0 0 chr17 36314 36346 -85402134 + (TG)n Simple_repeat Simple_repeat 2 33 0 1500 182 7 20 chr17 36346 36503 -85401977 - AluJo SINE Alu -20 292 139 1975 89 32 0 chr17 36503 36784 -85401696 - AluSg SINE Alu -8 302 13 1500 182 7 20 chr17 36784 36922 -85401558 - AluJo SINE Alu -173 139 1 1408 93 15 0 chr17 37641 37845 -85400635 - AluSg/x SINE Alu -16 294 88 2358 77 0 3 chr17 37948 38248 -85400232 - AluSp SINE Alu -14 299 1 545 242 47 32 chr17 38250 38440 -85400040 - Charlie2 DNA MER1_type -556 2306 2114 455 137 41 0 chr17 38454 38527 -85399953 + FLAM_A SINE Alu 56 131 -11 952 275 30 0 chr17 38528 38790 -85399690 - Charlie2 DNA MER1_type -737 2125 1856 2308 80 3 0 chr17 38804 39106 -85399374 - AluSx SINE Alu -9 303 1 536 268 22 0 chr17 39228 39366 -85399114 - Charlie2 DNA MER1_type -2713 149 9 2293 95 7 0 chr17 39953 40257 -85398223 - AluSq SINE Alu -7 306 1 1033 89 0 0 chr17 40257 40392 -85398088 - AluSq/x SINE Alu -178 135 1 572 233 25 17 chr17 40396 40516 -85397964 - FLAM_A SINE Alu -15 127 7 2380 42 0 0 chr17 40523 40831 -85397649 - AluY SINE Alu 0 308 1 316 200 0 0 chr17 40842 40902 -85397578 - L1MA6 LINE L1 -5 6295 6236 240 307 162 0 chr17 41091 41234 -85397246 + MIR3 SINE MIR 10 179 -75 383 308 94 23 chr17 41247 41479 -85397001 - MIR SINE MIR -6 256 14 2326 70 3 0 chr17 42571 42872 -85395608 - AluSx SINE Alu -10 302 1 2036 60 53 21 chr17 44013 44296 -85394184 + AluSc SINE Alu 1 292 -17 766 79 4 2 chr17 44366 44607 -85393873 + AluSx SINE Alu 1 290 -19 291 106 0 0 chr17 44727 44774 -85393706 + Alu SINE Alu 254 300 -2 1786 167 7 7 chr17 44835 45140 -85393340 + AluJb SINE Alu 1 305 -7 2270 74 0 0 chr17 45631 45915 -85392565 + AluSq SINE Alu 1 284 -29 201 300 0 67 chr17 45992 46082 -85392398 + L3 LINE CR1 1409 1492 -85 782 240 39 0 chr17 46548 46581 -85391899 + L1MB3 LINE L1 5970 6000 -183 207 0 0 0 chr17 46581 46604 -85391876 + (CGGAA)n Simple_repeat Simple_repeat 2 24 0 782 240 39 0 chr17 46604 46774 -85391706 + L1MB3 LINE L1 6000 6181 -2 2168 93 3 3 chr17 46783 47083 -85391397 + AluSq SINE Alu 1 300 -13 753 167 173 0 chr17 47099 47249 -85391231 + AluJo SINE Alu 122 297 -15 411 270 218 40 chr17 47250 47502 -85390978 - L1ME4a LINE L1 -34 6087 5791 23 0 0 0 chr17 47764 47787 -85390693 + AT_rich Low_complexity Low_complexity 1 23 0 1993 124 10 17 chr17 47787 48086 -85390394 - AluSx SINE Alu -15 297 1 263 373 40 0 chr17 48215 48365 -85390115 - L2 LINE L2 -868 2446 2291 474 291 40 7 chr17 49074 49222 -85389258 - MIR SINE MIR -29 233 81 2149 110 3 0 chr17 49223 49523 -85388957 + AluSx SINE Alu 1 301 -11 895 175 0 0 chr17 50045 50199 -85388281 + AluJo SINE Alu 1 154 -158 2144 102 10 0 chr17 50865 51159 -85387321 - AluSc SINE Alu -12 297 1 1177 99 0 12 chr17 51165 51327 -85387153 - FRAM SINE Alu -17 159 1 1960 104 24 0 chr17 51443 51731 -85386749 - AluSx SINE Alu -17 295 1 1793 92 53 32 chr17 52804 53085 -85385395 + AluSg SINE Alu 9 295 -15 608 300 130 0 chr17 53573 53803 -85384677 - MIR SINE MIR -1 261 2 252 0 0 0 chr17 53902 53930 -85384550 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 1789 152 11 0 chr17 53932 54208 -85384272 - AluJb SINE Alu -33 279 1 2345 80 3 0 chr17 55848 56149 -85382331 - AluSp SINE Alu -10 303 2 2188 101 30 0 chr17 57565 57863 -85380617 + AluSx SINE Alu 1 307 -5 2174 119 3 0 chr17 58306 58609 -85379871 + AluSx SINE Alu 1 304 -8 1038 106 0 0 chr17 58839 58980 -85379500 + AluJb SINE Alu 1 141 -171 26 30 0 0 chr17 58997 59030 -85379450 + AT_rich Low_complexity Low_complexity 1 33 0 324 0 0 0 chr17 59664 59700 -85378780 + (CA)n Simple_repeat Simple_repeat 2 37 0 1743 190 3 0 chr17 59780 60085 -85378395 + AluSx SINE Alu 1 306 -6 2535 33 0 0 chr17 60255 60554 -85377926 + AluY SINE Alu 1 299 -12 461 423 127 14 chr17 61732 62238 -85376242 + L3 LINE CR1 185 747 -830 404 42 0 0 chr17 62238 62286 -85376194 + AluY SINE Alu 155 202 -109 1828 101 8 8 chr17 62298 62555 -85375925 + AluSq SINE Alu 5 261 -52 932 64 29 81 chr17 62655 62751 -85375729 - MER30 DNA MER1_type -60 170 85 2226 101 3 0 chr17 62751 63047 -85375433 - AluSp SINE Alu -16 297 1 932 64 29 81 chr17 63047 63123 -85375357 - MER30 DNA MER1_type -145 85 7 410 263 47 52 chr17 63124 63337 -85375143 + L3 LINE CR1 1018 1229 -348 232 274 88 26 chr17 63530 63643 -85374837 + MLT1K LTR MaLR 97 216 -372 441 257 117 9 chr17 64000 64114 -85374366 + L1MC5 LINE L1 7458 7558 -403 2201 73 0 4 chr17 64114 64389 -85374091 + AluY SINE Alu 23 296 -15 441 257 117 9 chr17 64389 64488 -85373992 + L1MC5 LINE L1 7558 7694 -267 271 272 39 10 chr17 64580 64683 -85373797 + L1MC5 LINE L1 7822 7927 -34 863 192 23 6 chr17 64812 64989 -85373491 + AluJb SINE Alu 121 300 -12 2099 135 3 0 chr17 65058 65369 -85373111 + AluSx SINE Alu 1 312 0 682 268 41 41 chr17 65553 65796 -85372684 - MIR SINE MIR -10 252 10 2177 106 3 0 chr17 67346 67648 -85370832 - AluSp SINE Alu -10 303 1 2317 74 0 0 chr17 67831 68128 -85370352 + AluY SINE Alu 1 297 -14 497 113 38 0 chr17 68289 68369 -85370111 + AluS SINE Alu 1 83 -230 202 244 0 0 chr17 69421 69466 -85369014 + T-rich Low_complexity Low_complexity 1 45 0 565 103 0 0 chr17 70092 70170 -85368310 + AluSq/x SINE Alu 58 135 -178 2096 76 0 28 chr17 70170 70459 -85368021 + AluSx SINE Alu 1 281 -31 397 278 43 43 chr17 72266 72428 -85366052 + MIR3 SINE MIR 5 166 -42 420 287 237 20 chr17 72676 73168 -85365312 - L2 LINE L2 -16 3297 2688 1326 102 0 0 chr17 73243 73430 -85365050 - AluSg/x SINE Alu 0 312 126 2413 49 7 10 chr17 73430 73738 -85364742 - AluY SINE Alu -4 307 1 1795 154 16 3 chr17 73765 74070 -85364410 - AluJb SINE Alu -3 309 1 202 289 141 58 chr17 74078 74199 -85364281 - MIR SINE MIR -122 140 10 2407 83 0 0 chr17 74525 74837 -85363643 - AluSx SINE Alu 0 312 1 832 92 0 0 chr17 76480 76599 -85361881 - AluSx SINE Alu 0 312 194 1042 93 7 0 chr17 76600 76740 -85361740 - AluSx SINE Alu -171 141 1 1644 119 67 28 chr17 76810 77095 -85361385 - AluSg SINE Alu -14 296 1 2163 85 0 0 chr17 77209 77481 -85360999 - AluSc SINE Alu -37 272 1 245 196 0 36 chr17 77597 77653 -85360827 + MLT2D LTR ERVL 1 54 -360 6079 196 18 12 chr17 77656 78957 -85359523 + ERVL LTR ERVL 3031 4338 -1426 5980 167 25 3 chr17 79341 80456 -85358024 + ERVL LTR ERVL 4298 5437 -327 248 217 17 0 chr17 80457 80517 -85357963 - Tigger1 DNA MER2_type -2 2416 2356 2064 131 3 7 chr17 80517 80823 -85357657 + AluSx SINE Alu 1 305 -7 2134 109 3 0 chr17 80824 81126 -85357354 + AluY SINE Alu 1 303 -8 1749 137 53 14 chr17 81126 81661 -85356819 - Tigger1 DNA MER2_type -210 2208 1582 2019 147 0 0 chr17 81662 81961 -85356519 - AluJb SINE Alu -13 299 1 369 0 0 0 chr17 82901 82942 -85355538 + (TG)n Simple_repeat Simple_repeat 2 42 0 2415 64 0 0 chr17 82952 83248 -85355232 - AluY SINE Alu -15 296 1 2064 112 10 10 chr17 83296 83608 -85354872 + AluSx SINE Alu 1 312 0 997 104 8 0 chr17 83643 83777 -85354703 + AluSg/x SINE Alu 144 278 -32 8160 51 24 4 chr17 83777 84764 -85353716 - LTR13 LTR ERVK 0 1007 1 315 0 0 0 chr17 84772 84807 -85353673 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 2048 98 0 33 chr17 85554 85860 -85352620 - AluSg SINE Alu -14 296 1 202 280 0 0 chr17 86297 86347 -85352133 + GA-rich Low_complexity Low_complexity 3 52 0 408 208 26 32 chr17 86607 86761 -85351719 + (CGGGG)n Simple_repeat Simple_repeat 3 155 0 195 152 0 0 chr17 87068 87114 -85351366 + G-rich Low_complexity Low_complexity 6 51 0 377 253 86 21 chr17 87323 87496 -85350984 + Charlie2 DNA MER1_type 2423 2610 -252 2311 70 0 26 chr17 87496 87809 -85350671 - AluY SINE Alu -6 305 1 377 253 86 21 chr17 87809 87821 -85350659 + Charlie2 DNA MER1_type 2610 2620 -242 2540 40 0 0 chr17 87909 88206 -85350274 - AluY SINE Alu -14 297 1 848 239 24 0 chr17 88206 88419 -85350061 + Charlie2 DNA MER1_type 2604 2821 -41 244 290 160 10 chr17 88594 88694 -85349786 - MIR SINE MIR -54 208 94 300 281 49 0 chr17 88798 88880 -85349600 + MIR SINE MIR 98 183 -79 230 322 59 67 chr17 89837 90076 -85348404 + MER102a DNA MER1_type 85 321 -9 261 329 58 44 chr17 90646 90783 -85347697 - MIR SINE MIR -54 154 16 813 254 40 20 chr17 94487 94688 -85343792 + MIR SINE MIR 21 225 -37 23 0 0 0 chr17 99896 99919 -85338561 + AT_rich Low_complexity Low_complexity 1 23 0 1905 107 48 38 chr17 101850 102139 -85336341 + AluSg SINE Alu 1 292 -18 708 191 34 14 chr17 102139 102286 -85336194 + MER20 DNA MER1_type 69 218 -1 351 65 0 0 chr17 102684 102730 -85335750 + (TA)n Simple_repeat Simple_repeat 1 46 0 503 228 65 8 chr17 103658 103781 -85334699 - MIR SINE MIR -70 192 63 1800 61 5 0 chr17 104225 104439 -85334041 - AluY SINE Alu -13 298 84 1284 98 5 79 chr17 105503 105706 -85332774 + AluSg SINE Alu 1 188 -122 1609 84 10 0 chr17 105706 105908 -85332572 + AluSq SINE Alu 104 307 -6 1379 223 41 0 chr17 105909 106228 -85332252 + MER63 DNA MER1_type 680 1011 -49 2330 91 0 0 chr17 106253 106539 -85331941 - AluSx SINE Alu -26 286 1 1122 164 0 0 chr17 106913 107078 -85331402 + AluJb SINE Alu 137 301 -11 2098 101 39 3 chr17 107229 107515 -85330965 + AluSc SINE Alu 1 296 -13 213 272 47 6 chr17 107907 108076 -85330404 + (AGGTG)n Simple_repeat Simple_repeat 3 178 0 266 265 29 12 chr17 108114 108284 -85330196 + (AGGTG)n Simple_repeat Simple_repeat 1 173 0 2521 71 0 7 chr17 109383 109692 -85328788 - AluSq SINE Alu -6 307 1 238 116 47 0 chr17 109762 109805 -85328675 - L1MB3 LINE L1 -7 6176 6132 2313 102 0 10 chr17 109805 110108 -85328372 - AluSx SINE Alu -12 300 1 851 173 13 13 chr17 113254 113410 -85325070 + BC200 scRNA scRNA 1 156 -44 1602 132 100 48 chr17 113414 113703 -85324777 + AluJo SINE Alu 1 304 -8 2324 106 0 3 chr17 114002 114303 -85324177 + AluSq SINE Alu 1 300 -13 283 270 180 0 chr17 114650 114761 -85323719 - MIR SINE MIR -120 142 12 2318 93 3 6 chr17 115224 115535 -85322945 - AluSq SINE Alu -3 310 1 198 246 0 62 chr17 115566 115631 -85322849 + MIR3 SINE MIR 108 168 -40 240 318 93 6 chr17 115713 115872 -85322608 + MIR SINE MIR 20 191 -60 2290 125 0 0 chr17 116003 116314 -85322166 - AluSx SINE Alu -1 311 1 2140 97 41 3 chr17 117092 117382 -85321098 - AluSp SINE Alu -12 301 1 1252 114 0 16 chr17 117510 117694 -85320786 - AluSg/x SINE Alu -4 306 126 2106 130 0 3 chr17 117702 117995 -85320485 - AluJb SINE Alu -20 292 1 514 217 85 0 chr17 117996 118125 -85320355 - MIR SINE MIR -43 219 80 2310 114 0 0 chr17 118849 119156 -85319324 - AluSx SINE Alu -5 307 1 1230 209 25 48 chr17 119442 119757 -85318723 + AluJo SINE Alu 1 308 -4 932 244 59 59 chr17 119927 120011 -85318469 - MER33 DNA MER1_type -2261 324 241 2129 154 0 0 chr17 120011 120316 -85318164 + AluJo SINE Alu 6 310 -2 932 244 59 59 chr17 120316 120555 -85317925 - MER33 DNA MER1_type -2343 242 1 2133 102 9 25 chr17 120867 121182 -85317298 - AluSx SINE Alu -2 310 1 2225 111 0 3 chr17 121654 121952 -85316528 - AluSx SINE Alu -15 297 1 2241 122 3 0 chr17 122567 122871 -85315609 + AluSg SINE Alu 1 305 -5 2343 78 23 19 chr17 123132 123440 -85315040 + AluSg SINE Alu 1 309 -1 207 0 0 0 chr17 123845 123868 -85314612 + (T)n Simple_repeat Simple_repeat 1 23 0 2455 86 7 0 chr17 124205 124508 -85313972 - AluSx SINE Alu -7 305 1 365 97 32 0 chr17 124999 125061 -85313419 + GA-rich Low_complexity Low_complexity 3 66 0 290 212 21 88 chr17 125068 125261 -85313219 + (CAGAGA)n Simple_repeat Simple_repeat 1 180 0 411 257 9 0 chr17 125313 125418 -85313062 + MLT2B1 LTR ERVL 1 106 -414 2032 144 7 3 chr17 125419 125725 -85312755 - AluSq SINE Alu -6 307 1 1691 184 3 7 chr17 125877 126171 -85312309 + AluJo SINE Alu 1 293 -19 280 274 20 89 chr17 126402 126548 -85311932 - MIR3 SINE MIR -58 150 15 1778 128 74 30 chr17 127180 127478 -85311002 + AluJb SINE Alu 1 311 -1 2338 101 3 3 chr17 127594 127901 -85310579 - AluSx SINE Alu -5 307 1 2631 32 9 25 chr17 128409 128725 -85309755 + AluY SINE Alu 1 311 0 2275 83 9 49 chr17 128890 129216 -85309264 - AluSq SINE Alu 0 313 1 1514 153 6 86 chr17 129967 130148 -85308332 - AluJo SINE Alu -10 302 108 450 0 0 0 chr17 130148 130198 -85308282 + (TTTA)n Simple_repeat Simple_repeat 2 51 0 2349 70 0 11 chr17 130198 130485 -85307995 - AluY SINE Alu -27 284 1 1514 153 6 86 chr17 130485 130628 -85307852 - AluJo SINE Alu -202 110 3 310 167 0 77 chr17 131299 131377 -85307103 - AluYa5 SINE Alu -119 182 111 2056 108 32 0 chr17 131377 131655 -85306825 + AluSx SINE Alu 10 296 -16 2438 57 0 0 chr17 131657 131975 -85306505 + AluY SINE Alu 1 318 0 1935 244 98 51 chr17 132322 132900 -85305580 - L1ME2 LINE L1 -10 6154 5528 1550 165 85 0 chr17 132900 133172 -85305308 + AluJb SINE Alu 1 295 -17 1935 244 98 51 chr17 133172 133375 -85305105 - L1ME2 LINE L1 -636 5528 5336 2108 93 11 0 chr17 134839 135108 -85303372 + AluSx SINE Alu 1 272 -40 2076 51 4 19 chr17 135208 135491 -85302989 + AluY SINE Alu 32 310 0 1764 176 0 38 chr17 135565 135878 -85302602 - AluJb SINE Alu -11 301 1 792 233 30 15 chr17 136175 136377 -85302103 - MER20 DNA MER1_type -14 205 1 2370 56 0 3 chr17 137546 137876 -85300604 + AluY SINE Alu 1 329 0 1768 104 120 0 chr17 138428 138687 -85299793 - AluSx SINE Alu -16 296 7 1766 135 53 0 chr17 139712 139993 -85298487 - AluSx SINE Alu -16 296 1 268 338 14 45 chr17 140108 140293 -85298187 - L1MC/D LINE L1 -299 5822 5688 2373 88 7 0 chr17 140293 140590 -85297890 - AluSx SINE Alu -12 300 2 268 338 14 45 chr17 140590 140661 -85297819 - L1MC/D LINE L1 -433 5688 5616 1370 203 29 22 chr17 142300 142616 -85295864 - L1MC2 LINE L1 -9 6335 6018 275 229 134 89 chr17 142616 142773 -85295707 + MER20 DNA MER1_type 53 216 -3 281 264 0 42 chr17 143205 143349 -85295131 + (GGTTG)n Simple_repeat Simple_repeat 2 139 0 232 300 0 39 chr17 143389 143569 -85294911 + (GGTTG)n Simple_repeat Simple_repeat 2 174 0 195 222 22 0 chr17 143768 143813 -85294667 + MIR SINE MIR 105 150 -112 1707 149 46 4 chr17 143993 144255 -85294225 + AluJb SINE Alu 1 273 -39 372 234 0 0 chr17 144257 144351 -85294129 + (CAGA)n Simple_repeat Simple_repeat 3 96 0 2343 78 0 26 chr17 144680 144987 -85293493 + AluY SINE Alu 1 299 -12 761 35 43 9 chr17 145573 145689 -85292791 + (TTTC)n Simple_repeat Simple_repeat 1 120 0 1843 98 78 0 chr17 145691 145946 -85292534 - AluSx SINE Alu -37 275 1 219 296 70 0 chr17 146207 146278 -85292202 - MIR SINE MIR -173 89 14 554 91 0 71 chr17 146376 146475 -85292005 - AluSp/q SINE Alu -10 303 212 290 154 19 0 chr17 146783 146835 -85291645 - MSTA LTR MaLR 0 428 376 * 395 216 0 0 chr17 146833 146907 -85291573 - AluJ/FRAM SINE Alu -3 299 226 2301 117 8 34 chr17 146924 146974 -85291506 - THE1C LTR MaLR 0 375 325 2225 99 14 0 chr17 146974 147267 -85291213 - AluSg SINE Alu -13 297 1 2301 117 8 34 chr17 147267 147601 -85290879 - THE1C LTR MaLR -50 325 1 2220 102 17 0 chr17 148064 148359 -85290121 - AluSx SINE Alu -12 300 1 691 205 40 145 chr17 148359 148656 -85289824 - MLT2D LTR ERVL -49 365 100 502 105 26 0 chr17 148656 148732 -85289748 + AluS SINE Alu 1 78 -234 2300 96 3 0 chr17 148889 149181 -85289299 + AluSx SINE Alu 1 293 -19 332 156 26 39 chr17 150161 150238 -85288242 - L1MC4 LINE L1 0 8042 7967 219 204 61 0 chr17 150591 150640 -85287840 - MER5A DNA MER1_type -133 56 5 1196 208 4 49 chr17 150698 150790 -85287690 - MER8 DNA MER2_type 0 239 144 1881 143 0 7 chr17 150790 151083 -85287397 + AluJo SINE Alu 1 291 -21 2321 100 10 0 chr17 151086 151385 -85287095 + AluY SINE Alu 1 302 -9 1196 208 4 49 chr17 151385 151533 -85286947 - MER8 DNA MER2_type -97 142 6 1912 284 76 41 chr17 151533 152014 -85286466 - L1MC4 LINE L1 -156 7886 7424 1764 171 0 26 chr17 152014 152319 -85286161 - AluJo SINE Alu -15 297 1 1912 284 76 41 chr17 152319 152422 -85286058 - L1MC4 LINE L1 -618 7424 7326 2075 138 7 13 chr17 152422 152729 -85285751 + AluSx SINE Alu 1 303 -9 1912 284 76 41 chr17 152729 153118 -85285362 - L1MC4 LINE L1 -716 7326 6952 2015 132 0 0 chr17 153118 153414 -85285066 + AluSx SINE Alu 1 296 -16 1912 284 76 41 chr17 153414 153858 -85284622 - L1MC4 LINE L1 -1090 6952 6116 1306 156 0 0 chr17 153858 154070 -85284410 + AluSx SINE Alu 1 212 -100 430 121 0 0 chr17 154070 154128 -85284352 + AluSg/x SINE Alu 76 133 -176 1920 131 0 0 chr17 154128 154434 -85284046 + AluSx SINE Alu 1 306 0 2317 80 0 6 chr17 155793 156106 -85282374 - AluY SINE Alu 0 311 1 231 277 67 0 chr17 156114 156233 -85282247 + MER113 DNA MER1_type? 4 130 -391 869 165 0 0 chr17 156233 156366 -85282114 + FLAM_C SINE Alu 1 133 0 1390 115 5 10 chr17 156374 156582 -85281898 + AluJb SINE Alu 94 300 -12 680 278 0 6 chr17 156588 156764 -85281716 + MER113 DNA MER1_type? 296 470 -51 2222 107 3 0 chr17 156992 157301 -85281179 + AluSx SINE Alu 1 310 -2 800 250 38 0 chr17 157319 157503 -85280977 + MLT1A1 LTR MaLR 175 365 0 1368 173 4 15 chr17 157508 157768 -85280712 + MLT1A1-int LTR MaLR 2 258 -1477 2060 90 37 10 chr17 157768 158068 -85280412 + AluSx SINE Alu 1 308 -4 2204 83 10 0 chr17 158345 158635 -85279845 - AluSc SINE Alu -16 293 1 1647 161 3 10 chr17 159263 159554 -85278926 - AluJo SINE Alu -23 289 1 2241 98 0 0 chr17 159575 159871 -85278609 - AluSx SINE Alu -16 296 1 2360 59 0 23 chr17 159875 160181 -85278299 - AluY SINE Alu -12 299 1 327 275 56 112 chr17 160367 160528 -85277952 - L2 LINE L2 0 3313 3179 2140 88 7 3 chr17 160528 160824 -85277656 + AluSg SINE Alu 1 297 -13 327 275 56 112 chr17 160824 161000 -85277480 - L2 LINE L2 -134 3179 2995 1960 110 27 14 chr17 161086 161378 -85277102 - AluSx SINE Alu -16 296 1 1209 120 0 0 chr17 161403 161570 -85276910 + AluY SINE Alu 133 299 -12 264 237 34 0 chr17 161579 161638 -85276842 - MER5A DNA MER1_type -64 125 65 1232 186 8 27 chr17 162447 162710 -85275770 - AluJo SINE Alu -43 269 12 1981 136 3 3 chr17 162726 163100 -85275380 + AluSg SINE Alu 1 374 0 1806 96 3 108 chr17 163586 163921 -85274559 + AluSp SINE Alu 1 300 -13 2133 68 10 3 chr17 163977 164269 -85274211 - AluY SINE Alu -17 294 1 317 429 7 0 chr17 164293 164447 -85274033 - L2 LINE L2 -7 3265 3111 187 274 0 48 chr17 164486 164548 -85273932 + MIR SINE MIR 204 262 0 289 326 18 54 chr17 164962 165186 -85273294 - L2 LINE L2 -222 3050 2835 287 226 0 57 chr17 165194 165318 -85273162 + G-rich Low_complexity Low_complexity 3 119 0 294 270 180 0 chr17 166422 166533 -85271947 + MIR SINE MIR 12 142 -120 2221 93 3 6 chr17 166574 166887 -85271593 - AluSp SINE Alu -1 312 1 1026 126 0 0 chr17 166977 167128 -85271352 - FRAM SINE Alu -26 150 1 254 284 59 10 chr17 167360 167462 -85271018 + L2 LINE L2 3111 3217 -96 2434 65 0 3 chr17 167612 167918 -85270562 + AluSx SINE Alu 1 305 -7 1630 164 51 0 chr17 167997 168290 -85270190 - AluJb SINE Alu -4 308 1 224 309 62 10 chr17 168290 168387 -85270093 - L2 LINE L2 -219 3053 2952 216 320 40 10 chr17 168423 168523 -85269957 - L2 LINE L2 -219 3053 2951 409 238 79 0 chr17 168631 168732 -85269748 + MER20 DNA MER1_type 111 219 0 2094 109 0 16 chr17 168890 169202 -85269278 + AluSx SINE Alu 1 307 -5 873 166 43 21 chr17 170332 170519 -85267961 - AluJo SINE Alu -3 309 119 2468 60 0 0 chr17 170931 171233 -85267247 - AluY SINE Alu -9 302 1 1070 179 82 0 chr17 171322 171517 -85266963 + AluSg SINE Alu 1 211 -99 422 73 0 0 chr17 171517 171572 -85266908 + AluSq/x SINE Alu 78 132 -181 1573 118 114 0 chr17 171575 171820 -85266660 + AluSg SINE Alu 1 273 -37 342 170 0 0 chr17 171935 171988 -85266492 - Alu SINE Alu -16 286 234 351 270 42 112 chr17 172097 172338 -85266142 + L1ME1 LINE L1 5896 6119 -47 347 251 61 28 chr17 172338 172464 -85266016 + L1ME1 LINE L1 6046 6331 -3 2395 66 3 3 chr17 172482 172785 -85265695 + AluY SINE Alu 1 303 -8 1994 152 0 0 chr17 172793 173103 -85265377 + AluSx SINE Alu 1 310 -2 1305 96 5 24 chr17 173215 173423 -85265057 - AluSx SINE Alu -108 204 1 1906 128 7 0 chr17 175104 175400 -85263080 - AluSx SINE Alu -14 298 1 1547 84 13 4 chr17 175693 175920 -85262560 + AluY SINE Alu 1 229 -82 629 99 0 0 chr17 176021 176112 -85262368 - AluJ/FLAM SINE Alu -220 92 2 2328 64 7 3 chr17 176960 177257 -85261223 + AluY SINE Alu 1 298 -13 2302 56 3 30 chr17 177665 177970 -85260510 + AluY SINE Alu 1 297 -14 1642 115 13 102 chr17 178350 178703 -85259777 + AluSx SINE Alu 1 325 0 626 148 109 47 chr17 178703 178831 -85259649 + MER2 DNA MER2_type 3 138 -207 744 168 0 8 chr17 178840 178971 -85259509 - FLAM_C SINE Alu -3 130 1 182 269 191 28 chr17 178979 179120 -85259360 + L2 LINE L2 1506 1669 -1645 2215 94 3 0 chr17 179132 179430 -85259050 - AluSq SINE Alu -14 299 1 615 338 52 7 chr17 179647 179952 -85258528 + L2 LINE L2 2987 3305 -8 5233 66 8 0 chr17 180037 180690 -85257790 + L1PA8 LINE L1 5514 6171 -1 2065 90 7 0 chr17 180696 180973 -85257507 + AluSx SINE Alu 3 281 -31 251 311 82 7 chr17 180987 181122 -85257358 + L1ME LINE L1 5396 5540 -581 508 276 112 19 chr17 182127 182341 -85256139 + MIR SINE MIR 23 256 -6 652 139 124 22 chr17 182364 182501 -85255979 - AluJb SINE Alu -31 281 131 252 0 0 0 chr17 182503 182531 -85255949 + (TTA)n Simple_repeat Simple_repeat 2 29 0 1549 181 4 0 chr17 182540 182817 -85255663 - AluJo SINE Alu -34 278 1 2229 90 3 3 chr17 183660 183972 -85254508 - AluSx SINE Alu 0 312 1 271 170 0 0 chr17 184134 184187 -85254293 + L1MB4 LINE L1 6128 6180 0 721 288 56 0 chr17 184473 184688 -85253792 + MIR SINE MIR 13 239 -23 2308 84 0 10 chr17 184691 185001 -85253479 + AluSq SINE Alu 1 307 -6 1716 129 50 4 chr17 185073 185353 -85253127 + AluJb SINE Alu 7 299 -13 2196 110 7 0 chr17 185353 185662 -85252818 + AluSx SINE Alu 1 311 -1 2009 96 50 0 chr17 187727 188007 -85250473 - AluSx SINE Alu -18 294 1 247 299 93 10 chr17 188214 188311 -85250169 + L2 LINE L2 3163 3267 -5 2145 104 0 10 chr17 188817 189124 -85249356 + AluSx SINE Alu 1 304 -8 3224 113 10 12 chr17 190310 190807 -85247673 + LTR10D LTR ERV1 1 496 -17 1985 108 40 0 chr17 190812 191108 -85247372 - AluSg1 SINE Alu 0 309 2 1867 103 10 61 chr17 191158 191469 -85247011 - AluSg SINE Alu -14 296 2 2324 100 0 0 chr17 192372 192682 -85245798 + AluSg SINE Alu 1 310 0 2148 92 0 3 chr17 194174 194598 -85243882 - AluSq SINE Alu 0 423 1 2063 106 3 0 chr17 195101 195393 -85243087 - AluSx SINE Alu -13 299 7 548 288 123 14 chr17 196061 196273 -85242207 - MIR SINE MIR -19 243 9 2300 64 7 0 chr17 196612 196908 -85241572 + AluY SINE Alu 1 298 -13 2135 111 7 0 chr17 197387 197685 -85240795 + AluSx SINE Alu 1 300 -12 2311 98 0 0 chr17 197685 197991 -85240489 + AluSx SINE Alu 1 306 -6 2437 59 0 3 chr17 198441 198747 -85239733 - AluY SINE Alu -6 305 1 702 49 0 0 chr17 198747 198829 -85239651 - AluY SINE Alu -167 144 63 1195 120 71 0 chr17 198829 199013 -85239467 - AluSx SINE Alu -115 197 1 1555 155 50 7 chr17 200843 201140 -85237340 - AluJo SINE Alu -2 310 1 206 246 0 155 chr17 201152 201294 -85237186 - MER5A DNA MER1_type -63 126 7 437 197 49 38 chr17 201401 201540 -85236940 + MER5B DNA MER1_type 56 178 0 2326 68 0 26 chr17 201741 202051 -85236429 + AluY SINE Alu 1 302 -9 2296 97 0 0 chr17 202673 202971 -85235509 - AluSx SINE Alu -14 298 1 2057 138 0 0 chr17 202974 203270 -85235210 - AluSx SINE Alu -16 296 1 554 204 0 10 chr17 203377 203480 -85235000 - FLAM_A SINE Alu -8 134 33 2295 98 7 0 chr17 203784 204089 -85234391 - AluSq SINE Alu -6 307 1 2234 87 20 0 chr17 204313 204612 -85233868 - AluY SINE Alu -6 305 1 322 251 61 28 chr17 204630 204756 -85233724 - L1ME1 LINE L1 -3 6331 6046 283 261 46 116 chr17 204756 204997 -85233483 - L1ME1 LINE L1 -47 6119 5896 2074 115 3 0 chr17 205696 205983 -85232497 + AluSx SINE Alu 1 288 -24 1306 82 0 0 chr17 207210 207381 -85231099 + AluSg/x SINE Alu 138 308 -4 189 0 0 0 chr17 208695 208716 -85229764 + (CACCC)n Simple_repeat Simple_repeat 3 23 0 1134 164 0 0 chr17 209342 209525 -85228955 + AluJo SINE Alu 112 294 -18 2312 76 10 3 chr17 209915 210217 -85228263 + AluSx SINE Alu 9 312 0 1806 243 98 51 chr17 210566 211144 -85227336 - L1ME2 LINE L1 -10 6154 5528 1426 167 93 0 chr17 211144 211414 -85227066 + AluJb SINE Alu 1 295 -17 1806 243 98 51 chr17 211414 211617 -85226863 - L1ME2 LINE L1 -636 5528 5336 2282 95 10 0 chr17 213081 213386 -85225094 + AluSx SINE Alu 1 308 -4 2291 84 3 0 chr17 213488 213784 -85224696 - AluSq SINE Alu -16 297 1 2092 98 0 0 chr17 214608 214882 -85223598 - AluSq SINE Alu -39 274 1 236 320 20 68 chr17 215271 215521 -85222959 + L2 LINE L2 2817 3054 -218 188 274 0 48 chr17 215930 215992 -85222488 - MIR SINE MIR 0 262 204 334 429 7 0 chr17 216031 216185 -85222295 + L2 LINE L2 3111 3265 -7 1488 64 5 0 chr17 216209 216397 -85222083 + AluY SINE Alu 1 189 -122 204 320 190 34 chr17 218263 218532 -85219948 + L2 LINE L2 2932 3242 -30 347 288 129 71 chr17 219610 220189 -85218291 + L1M2 LINE L1 757 1369 -5480 303 313 98 0 chr17 221398 221510 -85216970 + MIR SINE MIR 52 174 -88 2024 131 0 3 chr17 222065 222362 -85216118 + AluSx SINE Alu 1 296 -16 201 224 0 0 chr17 223530 223579 -85214901 - MIR SINE MIR -79 129 81 695 186 0 9 chr17 226131 226244 -85212236 - AluJb SINE Alu -195 117 6 2224 88 14 3 chr17 226580 226876 -85211604 + AluSx SINE Alu 1 299 -13 2160 97 0 26 chr17 226895 227203 -85211277 + AluSx SINE Alu 1 300 -12 340 161 0 0 chr17 228648 228704 -85209776 - AluS SINE Alu -244 57 2 2135 147 144 0 chr17 228865 229239 -85209241 + MSTA LTR MaLR 1 428 0 1799 177 0 6 chr17 229253 229564 -85208916 - AluSx SINE Alu -3 309 1 1633 125 29 96 chr17 229592 229905 -85208575 + AluJo SINE Alu 2 293 -19 209 281 226 7 chr17 231735 231881 -85206599 - L2 LINE L2 -4 3268 3091 2204 134 0 0 chr17 232060 232367 -85206113 + AluSx SINE Alu 1 307 -5 794 105 48 32 chr17 233003 233127 -85205353 + FLAM_C SINE Alu 1 126 -17 1602 166 32 3 chr17 233143 233426 -85205054 + AluJo SINE Alu 1 291 -21 2153 82 14 0 chr17 233626 233934 -85204546 + AluSg SINE Alu 1 312 0 189 359 13 13 chr17 234423 234501 -85203979 + MIR SINE MIR 67 144 -118 412 305 26 26 chr17 238135 238286 -85200194 - MIR3 SINE MIR -55 153 3 257 268 0 0 chr17 238695 238751 -85199729 + C-rich Low_complexity Low_complexity 4 59 0 1858 147 0 10 chr17 238887 239186 -85199294 + AluJb SINE Alu 4 299 -13 721 283 91 8 chr17 240273 240634 -85197846 - MER90 LTR ERV1 -63 551 161 214 371 0 0 chr17 240798 240860 -85197620 + L2 LINE L2 3242 3303 -10 2123 95 3 14 chr17 240860 241155 -85197325 + AluSx SINE Alu 1 292 -20 319 234 36 36 chr17 241401 241512 -85196968 - MER103 DNA DNA -46 120 10 503 243 40 7 chr17 242565 242717 -85195763 + L1ME4a LINE L1 5961 6117 -4 999 121 0 0 chr17 243917 244058 -85194422 - AluSq/x SINE Alu -172 141 1 2214 166 18 2 chr17 244058 244497 -85193983 - L1ME1 LINE L1 -211 5955 5510 467 270 20 77 chr17 244521 244717 -85193763 - MIR SINE MIR 0 262 78 364 301 163 44 chr17 244730 244997 -85193483 - L2 LINE L2 -1 3312 3078 2394 89 0 0 chr17 244997 245310 -85193170 - AluSp SINE Alu 0 313 1 364 301 163 44 chr17 245310 245582 -85192898 - L2 LINE L2 -235 3078 2708 2021 116 3 32 chr17 246160 246465 -85192015 + AluSx SINE Alu 1 297 -10 369 0 0 0 chr17 246465 246506 -85191974 + (CATA)n Simple_repeat Simple_repeat 2 42 0 1108 140 0 0 chr17 246511 246675 -85191805 + AluSg/x SINE Alu 132 295 -15 1408 120 9 40 chr17 248283 248508 -85189972 + AluSg/x SINE Alu 95 312 0 2093 122 3 0 chr17 249435 249731 -85188749 - AluSx SINE Alu -11 301 5 2074 97 0 27 chr17 249735 250033 -85188447 - AluSx SINE Alu -22 290 1 1815 189 20 40 chr17 250067 250421 -85188059 + MER7A DNA MER2_type 2 346 0 563 165 0 10 chr17 250644 250741 -85187739 + AluS SINE Alu 1 96 -216 1557 96 0 26 chr17 250864 251094 -85187386 - AluSg SINE Alu -86 224 1 567 15 0 0 chr17 251336 251424 -85187056 + AluY SINE Alu 217 304 0 2356 55 7 0 chr17 251438 251727 -85186753 + AluY SINE Alu 5 295 -16 847 11 30 57 chr17 251727 251979 -85186501 + (TA)n Simple_repeat Simple_repeat 1 245 0 382 220 0 51 chr17 252829 252947 -85185533 + MER20B DNA MER1_type 31 142 -641 1148 128 0 0 chr17 254227 254391 -85184089 - AluSg/x SINE Alu -15 297 134 405 0 0 0 chr17 254396 254441 -85184039 + (TATG)n Simple_repeat Simple_repeat 2 46 0 1941 114 7 23 chr17 254441 254742 -85183738 - AluSx SINE Alu -10 297 1 358 298 111 65 chr17 255491 255592 -85182888 + L2 LINE L2 2927 3022 -291 2388 89 0 0 chr17 255592 255905 -85182575 + AluSp SINE Alu 1 313 0 358 298 111 65 chr17 255905 256172 -85182308 + L2 LINE L2 3022 3312 -1 463 270 20 77 chr17 256185 256381 -85182099 + MIR SINE MIR 78 262 0 2660 165 63 23 chr17 256405 256844 -85181636 + L1ME1 LINE L1 5510 5977 -189 2340 91 0 0 chr17 256844 257151 -85181329 + AluSx SINE Alu 1 307 -5 2660 165 63 23 chr17 257151 257268 -85181212 + L1ME1 LINE L1 5977 6088 -78 6441 50 16 32 chr17 257620 258496 -85179984 - SVA Other Other 0 1386 525 461 289 23 2 chr17 259217 259387 -85179093 - MIR SINE MIR -41 221 44 523 206 41 0 chr17 260531 260628 -85177852 - Tigger3(Golem) DNA MER2_type 0 3029 2929 1701 118 103 79 chr17 260631 260960 -85177520 - MER1B DNA MER1_type 0 337 1 365 218 26 0 chr17 260977 261055 -85177425 - Tigger3(Golem) DNA MER2_type -2949 80 1 408 311 141 6 chr17 261120 261297 -85177183 - MIR SINE MIR -53 209 9 899 278 51 88 chr17 261304 261794 -85176686 + L2 LINE L2 2399 2870 -444 265 328 107 6 chr17 262113 262430 -85176050 + L2 LINE L2 2887 3307 -6 331 311 131 39 chr17 262438 262698 -85175782 + L2 LINE L2 2939 3222 -50 1189 171 0 0 chr17 262833 263020 -85175460 + AluJo SINE Alu 1 187 -125 2095 112 10 0 chr17 266139 266442 -85172038 - AluSx SINE Alu -6 306 1 269 324 118 0 chr17 266863 266965 -85171515 - MIR SINE MIR -72 190 77 484 291 86 83 chr17 267195 267556 -85170924 - L2 LINE L2 -1 3271 2910 821 159 0 0 chr17 268069 268195 -85170285 - FLAM_C SINE Alu -16 127 2 2030 188 124 8 chr17 268197 268739 -85169741 - L1MC4a LINE L1 -289 7519 6940 1533 172 39 26 chr17 268745 269053 -85169427 + AluJb SINE Alu 1 312 0 1051 129 13 258 chr17 271427 271970 -85166510 + L1MC4 LINE L1 7491 7900 -142 1129 165 37 0 chr17 271975 272163 -85166317 + AluJb SINE Alu 1 195 -117 291 93 0 0 chr17 272163 272206 -85166274 + (GGGGA)n Simple_repeat Simple_repeat 1 43 0 183 205 0 0 chr17 272206 272245 -85166235 + A-rich Low_complexity Low_complexity 5 43 0 423 245 26 40 chr17 272246 272397 -85166083 + L1MC4 LINE L1 7892 8040 -2 408 40 0 0 chr17 272407 272457 -85166023 + (TCTCCC)n Simple_repeat Simple_repeat 6 55 0 285 149 0 0 chr17 272579 272626 -85165854 - AluSp SINE Alu -128 175 129 * 354 137 0 0 chr17 272625 272676 -85165804 - AluSp SINE Alu -124 179 129 254 128 85 0 chr17 272675 272722 -85165758 - AluJ/F(R)AM SINE Alu -123 179 129 * 285 184 20 0 chr17 272721 272770 -85165710 - AluSp SINE Alu -124 179 130 346 137 0 0 chr17 272770 272821 -85165659 - AluJ/F(R)AM SINE Alu -123 179 129 243 149 85 0 chr17 272820 272867 -85165613 - AluY SINE Alu -123 178 128 * 262 200 20 0 chr17 272866 272916 -85165564 - AluJ/F(R)AM SINE Alu -123 179 129 * 305 62 83 0 chr17 272915 272963 -85165517 - AluY SINE Alu -123 178 127 269 89 89 0 chr17 272963 273008 -85165472 - AluY SINE Alu -125 176 128 * 296 160 20 0 chr17 273007 273057 -85165423 - AluJ/F(R)AM SINE Alu -123 179 129 * 359 98 0 0 chr17 273056 273107 -85165373 - AluJ/F(R)AM SINE Alu -123 179 129 * 378 98 0 0 chr17 273106 273157 -85165323 - AluJ/F(R)AM SINE Alu -123 179 129 331 120 20 0 chr17 273156 273206 -85165274 - AluJ/F(R)AM SINE Alu -123 179 129 * 267 106 85 0 chr17 273205 273252 -85165228 - AluYa5 SINE Alu -123 178 128 * 264 106 85 0 chr17 273251 273298 -85165182 - AluY SINE Alu -123 178 128 * 271 200 20 0 chr17 273297 273347 -85165133 - AluJ/F(R)AM SINE Alu -123 179 129 * 363 98 0 0 chr17 273346 273397 -85165083 - AluJ/F(R)AM SINE Alu -123 179 129 363 224 5 42 chr17 273396 273596 -85164884 - AluJ/F(R)AM SINE Alu -123 179 129 349 118 0 0 chr17 273595 273646 -85164834 - AluSp SINE Alu -124 179 129 * 352 118 0 0 chr17 273645 273696 -85164784 - AluJ/F(R)AM SINE Alu -123 179 129 352 118 0 0 chr17 273695 273746 -85164734 - AluSc SINE Alu -122 177 127 * 363 192 20 74 chr17 273745 274046 -85164434 - AluSc SINE Alu -122 177 127 556 93 0 0 chr17 274727 274802 -85163678 - Alu SINE Alu -9 302 228 973 158 0 6 chr17 274803 274961 -85163519 - AluSq SINE Alu -156 157 1 321 109 0 0 chr17 275266 275312 -85163168 - Alu SINE Alu -254 46 1 378 314 51 40 chr17 275325 275599 -85162881 - L1ME LINE L1 -302 5819 5543 309 281 47 0 chr17 275679 275807 -85162673 - L1ME LINE L1 -2651 5391 5258 2207 97 3 10 chr17 275987 276297 -85162183 + AluSx SINE Alu 5 312 0 200 128 64 21 chr17 276503 276550 -85161930 + CT-rich Low_complexity Low_complexity 4 52 0 1387 107 62 9 chr17 276818 277042 -85161438 - AluJo SINE Alu -76 236 1 560 190 20 0 chr17 277940 278040 -85160440 + AluSg/x SINE Alu 211 312 0 358 293 156 6 chr17 280955 281122 -85157358 - L1ME4a LINE L1 0 6121 5930 1441 249 51 35 chr17 281140 281627 -85156853 - L1MB7 LINE L1 -19 6165 5671 1407 222 43 0 chr17 283417 283746 -85154734 - L1ME4a LINE L1 -456 5728 5386 1731 72 0 0 chr17 283764 283985 -85154495 + AluSq SINE Alu 1 221 -92 2310 69 3 10 chr17 284687 284992 -85153488 - AluSc SINE Alu -6 303 1 319 272 48 0 chr17 285106 285209 -85153271 + MIR SINE MIR 100 207 -55 1917 121 0 7 chr17 285330 285619 -85152861 - AluJb SINE Alu -25 287 1 2307 76 3 3 chr17 285904 286208 -85152272 - AluY SINE Alu -7 304 1 27 0 0 0 chr17 286276 286303 -85152177 + AT_rich Low_complexity Low_complexity 1 27 0 371 310 187 0 chr17 286308 286463 -85152017 - MER5A DNA MER1_type -2 187 4 431 351 52 60 chr17 286811 287159 -85151321 - L2 LINE L2 0 3272 2928 2137 88 0 0 chr17 288449 288722 -85149758 + AluSq SINE Alu 6 278 -35 345 78 4 4 chr17 288722 288780 -85149700 - Alu SINE Alu -256 44 1 2176 113 0 3 chr17 289223 289534 -85148946 - AluSx SINE Alu -2 310 1 2119 99 3 7 chr17 289534 289826 -85148654 - AluSg SINE Alu -18 292 1 572 228 6 10 chr17 290452 290956 -85147524 + (CA)n Simple_repeat Simple_repeat 1 502 0 2526 46 0 0 chr17 291286 291590 -85146890 + AluY SINE Alu 1 304 -7 292 298 35 0 chr17 292338 292452 -85146028 + CT-rich Low_complexity Low_complexity 3 120 0 2177 96 3 6 chr17 292591 292903 -85145577 - AluSx SINE Alu -1 311 1 2182 105 0 7 chr17 295954 296258 -85142222 + AluSx SINE Alu 1 302 -10 2122 93 28 0 chr17 296340 296631 -85141849 + AluSx SINE Alu 1 299 -13 390 100 0 0 chr17 297970 298030 -85140450 + (TG)n Simple_repeat Simple_repeat 1 60 0 226 252 55 84 chr17 299027 299076 -85139404 - MIR SINE MIR -7 255 206 1864 89 0 4 chr17 299076 299345 -85139135 - AluSx SINE Alu 0 305 38 226 252 55 84 chr17 299345 299472 -85139008 - MIR SINE MIR -56 206 85 1298 82 0 0 chr17 300491 300662 -85137818 + AluSg/x SINE Alu 136 306 -4 189 0 0 0 chr17 301978 301999 -85136481 + (CACCC)n Simple_repeat Simple_repeat 3 23 0 1131 158 0 0 chr17 302626 302809 -85135671 + AluJo SINE Alu 112 294 -18 2369 66 10 3 chr17 303198 303501 -85134979 + AluSx SINE Alu 6 310 -2 2480 73 0 0 chr17 304808 305108 -85133372 - AluSx SINE Alu -12 300 1 2073 105 63 0 chr17 306673 306959 -85131521 - AluSx SINE Alu -8 304 1 2238 100 3 7 chr17 308330 308630 -85129850 - AluSg SINE Alu -11 299 1 738 171 8 0 chr17 309000 309129 -85129351 + FLAM_C SINE Alu 4 133 0 1229 37 0 0 chr17 310360 310494 -85127986 + AluY SINE Alu 1 134 -177 2197 70 49 7 chr17 310494 310780 -85127700 + AluY SINE Alu 1 298 -13 2309 46 49 7 chr17 311451 311736 -85126744 - AluY SINE Alu -14 297 1 313 68 0 0 chr17 311736 311780 -85126700 - Alu SINE Alu -264 44 1 * 353 94 16 16 chr17 311780 311824 -85126656 - AluS SINE Alu -259 44 1 182 292 191 0 chr17 313641 313730 -85124750 - L2 LINE L2 -37 3276 3171 268 320 61 53 chr17 314444 314672 -85123808 - L2 LINE L2 -462 2852 2623 876 169 0 0 chr17 315817 315947 -85122533 + FLAM_C SINE Alu 1 130 -13 514 265 116 23 chr17 315961 316176 -85122304 - MIR SINE MIR -6 256 22 815 157 0 50 chr17 316324 316464 -85122016 + FLAM_C SINE Alu 1 133 0 1732 156 10 30 chr17 316493 316795 -85121685 - AluJb SINE Alu -16 296 1 2317 120 0 0 chr17 317093 317401 -85121079 + AluSx SINE Alu 1 308 -4 482 297 102 61 chr17 317481 317679 -85120801 - L1ME4a LINE L1 -127 5994 5806 2187 99 0 33 chr17 317679 317981 -85120499 - AluSq SINE Alu -21 292 1 482 297 102 61 chr17 317981 318233 -85120247 - L1ME4a LINE L1 -315 5806 5511 2160 101 14 14 chr17 318233 318367 -85120113 + AluSg SINE Alu 1 134 -174 2365 94 0 7 chr17 318367 318674 -85119806 + AluY SINE Alu 1 305 -6 2160 101 14 14 chr17 318674 318847 -85119633 + AluSg SINE Alu 133 308 0 482 297 102 61 chr17 318847 318980 -85119500 - L1ME4a LINE L1 -610 5511 5385 22 35 0 0 chr17 319508 319537 -85118943 + AT_rich Low_complexity Low_complexity 1 29 0 2149 98 28 0 chr17 321305 321592 -85116888 + AluSx SINE Alu 1 295 -17 933 37 0 0 chr17 321954 322062 -85116418 + AluSq/x SINE Alu 1 108 -204 241 250 0 0 chr17 323040 323088 -85115392 - L2 LINE L2 -95 3218 3171 191 342 40 13 chr17 323326 323402 -85115078 - L2 LINE L2 -1172 2142 2065 2340 91 0 7 chr17 323726 324024 -85114456 + AluSx SINE Alu 6 301 -11 1769 63 5 14 chr17 324178 324399 -85114081 - AluY SINE Alu -8 303 85 248 312 9 28 chr17 324589 324698 -85113782 - L2 LINE L2 -507 2807 2701 2623 51 0 10 chr17 324745 325059 -85113421 - AluY SINE Alu 0 311 1 274 250 159 0 chr17 325201 325289 -85113191 - MIR SINE MIR -115 147 46 2214 110 0 27 chr17 325289 325590 -85112890 - AluSq SINE Alu -16 297 5 2226 127 3 6 chr17 325595 325909 -85112571 - AluSq SINE Alu 0 313 1 1296 255 56 32 chr17 326529 326941 -85111539 - MER21B LTR ERV1 -113 750 329 545 221 79 0 chr17 326968 327108 -85111372 - MER21B LTR ERV1 -615 248 98 386 220 67 47 chr17 327080 327235 -85111245 - MER21B LTR ERV1 -407 198 5 * 2131 126 0 0 chr17 327289 327582 -85110898 - AluSx SINE Alu -19 293 1 832 248 82 40 chr17 328107 328588 -85109892 - L2 LINE L2 -225 3088 2587 441 291 137 21 chr17 329390 329631 -85108849 - MLT1L LTR MaLR -8 607 339 1010 144 58 0 chr17 329660 329833 -85108647 - AluSg/x SINE Alu -9 301 119 2251 105 0 3 chr17 329859 330155 -85108325 - AluSx SINE Alu -17 295 1 444 247 153 13 chr17 330167 330317 -85108163 - MLT1L LTR MaLR -326 289 119 348 229 46 9 chr17 331399 331508 -85106972 - L1ME4a LINE L1 -63 6058 5946 372 305 97 58 chr17 331577 331931 -85106549 - L1ME4a LINE L1 -353 5768 5388 2474 67 0 0 chr17 331931 332228 -85106252 - AluY SINE Alu -14 297 1 372 305 97 58 chr17 332228 332358 -85106122 - L1ME4a LINE L1 -733 5388 5265 514 315 68 89 chr17 332366 332728 -85105752 - L1ME4a LINE L1 -896 5250 4901 1626 207 6 22 chr17 332728 332904 -85105576 - AluJb SINE Alu -3 309 139 2395 92 0 25 chr17 332904 333219 -85105261 - AluSq SINE Alu -6 307 1 1626 207 6 22 chr17 333219 333356 -85105124 - AluJb SINE Alu -173 139 1 514 315 68 89 chr17 333356 333510 -85104970 - L1ME4a LINE L1 -1245 4901 4745 837 261 77 26 chr17 333933 334244 -85104236 + L1MC4a LINE L1 5607 5933 -1875 335 307 51 7 chr17 335816 335953 -85102527 + L2 LINE L2 1596 1738 -1576 315 219 27 14 chr17 337685 337758 -85100722 + L2 LINE L2 3239 3312 -1 385 291 131 23 chr17 337774 337949 -85100531 + MIR SINE MIR 59 252 -10 21 0 0 0 chr17 338058 338079 -85100401 + AT_rich Low_complexity Low_complexity 1 21 0 2049 139 3 0 chr17 338089 338376 -85100104 - AluSx SINE Alu -24 288 1 2404 97 0 0 chr17 338378 338678 -85099802 - AluSx SINE Alu -10 302 3 1861 158 0 3 chr17 338683 338967 -85099513 - AluJb SINE Alu -17 295 13 1611 91 0 36 chr17 339023 339244 -85099236 - AluSg/x SINE Alu -16 294 82 2556 61 0 3 chr17 339250 339560 -85098920 + AluY SINE Alu 1 309 -2 1628 164 43 4 chr17 339653 339933 -85098547 + AluJo SINE Alu 1 291 -21 321 93 0 0 chr17 340055 340098 -85098382 + Alu SINE Alu 1 43 -258 1499 71 6 0 chr17 340098 340280 -85098200 + AluSg/x SINE Alu 125 307 -5 243 0 0 0 chr17 340280 340307 -85098173 + (TA)n Simple_repeat Simple_repeat 1 27 0 369 239 28 9 chr17 340308 340368 -85098112 + L1ME LINE L1 5708 5772 -349 2351 110 0 0 chr17 340368 340676 -85097804 + AluSx SINE Alu 1 308 -4 369 239 28 9 chr17 340676 340724 -85097756 + L1ME LINE L1 5772 5818 -303 885 142 155 7 chr17 340728 340883 -85097597 + FRAM SINE Alu 1 172 -4 1916 204 108 52 chr17 341563 341793 -85096687 - L1ME2 LINE L1 -63 6101 5885 2617 55 3 0 chr17 341793 342103 -85096377 - AluY SINE Alu 0 311 1 1916 204 108 52 chr17 342103 342504 -85095976 - L1ME2 LINE L1 -279 5885 5435 593 194 167 7 chr17 342510 342654 -85095826 - AluJo SINE Alu -109 203 37 571 150 37 1 chr17 342655 342782 -85095698 - L1M1 LINE L1 -734 5430 5299 247 207 0 0 chr17 342924 342982 -85095498 - L1ME2 LINE L1 -968 5178 5121 573 138 0 11 chr17 343123 343217 -85095263 + LTR23 LTR ERV1 313 405 -32 22 35 0 0 chr17 343224 343253 -85095227 + AT_rich Low_complexity Low_complexity 1 29 0 2269 112 0 40 chr17 343281 343604 -85094876 - AluSx SINE Alu -2 310 1 315 261 56 99 chr17 343605 343630 -85094850 - MIR SINE MIR -49 213 188 2598 33 0 23 chr17 343630 343935 -85094545 - AluY SINE Alu -13 298 1 315 261 56 99 chr17 343935 344070 -85094410 - MIR SINE MIR -74 188 60 2208 112 3 0 chr17 345026 345322 -85093158 + AluSq SINE Alu 1 297 -16 591 204 18 0 chr17 345909 346022 -85092458 - FLAM_A SINE Alu -18 115 1 21 36 0 0 chr17 346416 346444 -85092036 + AT_rich Low_complexity Low_complexity 1 28 0 2320 78 41 0 chr17 347882 348177 -85090303 - AluSp SINE Alu -2 311 5 2007 93 7 7 chr17 348635 348905 -85089575 - AluSp SINE Alu 0 313 44 23 0 0 0 chr17 349029 349052 -85089428 + AT_rich Low_complexity Low_complexity 1 23 0 2169 102 7 0 chr17 349052 349346 -85089134 + AluSp SINE Alu 1 296 -17 932 192 43 14 chr17 349469 349677 -85088803 - AluJb SINE Alu -13 299 86 598 197 87 44 chr17 350194 350332 -85088148 - MER4C LTR ERV1 0 465 316 3823 67 34 0 chr17 350332 350828 -85087652 + LTR10D LTR ERV1 1 513 0 598 197 87 44 chr17 350828 350872 -85087608 - MER4C LTR ERV1 -149 316 275 890 130 162 7 chr17 351465 351619 -85086861 + FRAM SINE Alu 1 172 -4 824 103 0 9 chr17 351644 351751 -85086729 - AluSg/x SINE Alu -129 183 78 1513 120 0 5 chr17 351751 351960 -85086520 - AluSx SINE Alu -100 212 5 1230 178 54 25 chr17 351979 352221 -85086259 - AluJo SINE Alu -25 287 39 2258 73 16 36 chr17 352271 352574 -85085906 - AluSg SINE Alu -13 297 1 569 15 0 0 chr17 352816 352904 -85085576 + AluY SINE Alu 217 304 0 2678 37 3 0 chr17 352914 353213 -85085267 + AluY SINE Alu 1 300 -11 1180 167 90 2 chr17 353213 353463 -85085017 - L1MD2 LINE L1 -429 5930 5657 824 207 7 0 chr17 353472 353617 -85084863 + AluSg/x SINE Alu 135 280 -32 192 152 0 0 chr17 353630 353663 -85084817 + (TGGA)n Simple_repeat Simple_repeat 1 33 0 3100 84 40 2 chr17 353766 354219 -85084261 + LTR10D LTR ERV1 44 513 0 285 276 0 13 chr17 354272 354348 -85084132 - LTR59 LTR ERV1 -169 428 354 * 297 225 100 0 chr17 354327 354407 -85084073 - MER4C LTR ERV1 -201 264 177 335 200 100 0 chr17 354412 354492 -85083988 - MER4C LTR ERV1 -201 264 177 250 224 158 0 chr17 354497 354573 -85083907 - MER4C LTR ERV1 -201 264 177 335 200 100 0 chr17 354578 354658 -85083822 - MER4C LTR ERV1 -201 264 177 300 225 100 0 chr17 354663 354743 -85083737 - MER4C LTR ERV1 -201 264 177 321 213 100 0 chr17 354748 354828 -85083652 - MER4C LTR ERV1 -201 264 177 280 179 167 0 chr17 354833 354911 -85083569 - MER4C LTR ERV1 -201 264 174 * 654 152 54 121 chr17 354887 355232 -85083248 - MER4C LTR ERV1 -283 381 1 198 230 23 126 chr17 358435 358522 -85079958 + MIR SINE MIR 79 156 -106 488 291 105 0 chr17 358903 359075 -85079405 + MIR SINE MIR 59 248 -14 181 279 81 62 chr17 359897 360012 -85078468 - MIR SINE MIR -50 212 92 612 196 8 45 chr17 360012 360145 -85078335 - FLAM_A SINE Alu -5 128 1 181 279 81 62 chr17 360145 360190 -85078290 - MIR SINE MIR -170 92 49 274 309 204 25 chr17 361652 362015 -85076465 + L2 LINE L2 2046 2473 -841 519 178 11 0 chr17 366038 366128 -85072352 - FLAM_A SINE Alu -41 101 11 1731 143 66 21 chr17 366327 366614 -85071866 + AluJb SINE Alu 1 300 -12 783 134 15 22 chr17 366623 366757 -85071723 + FLAM_C SINE Alu 1 133 0 1760 124 0 0 chr17 370146 370388 -85068092 - AluSq SINE Alu -2 311 70 239 125 0 0 chr17 370388 370428 -85068052 - Alu SINE Alu -135 168 129 187 264 126 35 chr17 370452 370539 -85067941 + MIR SINE MIR 57 151 -111 824 100 0 50 chr17 370583 370723 -85067757 + FLAM_C SINE Alu 1 133 0 2109 98 35 41 chr17 370732 371047 -85067433 + AluSq SINE Alu 1 313 0 1881 153 21 0 chr17 371354 371642 -85066838 + AluJb SINE Alu 1 294 -18 2416 84 7 0 chr17 371825 372124 -85066356 + AluSx SINE Alu 1 301 -11 215 262 0 117 chr17 372459 372562 -85065918 - MIR SINE MIR -107 155 65 2494 87 0 10 chr17 372909 373220 -85065260 + AluSx SINE Alu 1 308 -4 2312 120 0 0 chr17 373267 373576 -85064904 + AluSg SINE Alu 1 309 -1 305 183 211 29 chr17 373914 374018 -85064462 - MER5A DNA MER1_type -3 186 64 2139 105 3 43 chr17 374214 374538 -85063942 - AluSx SINE Alu -1 311 1 2185 106 39 0 chr17 374909 375192 -85063288 + AluSx SINE Alu 1 294 -18 667 161 24 0 chr17 375239 375363 -85063117 + FLAM_C SINE Alu 1 127 -6 1531 174 68 20 chr17 375607 375900 -85062580 + AluJo SINE Alu 1 307 -5 879 144 0 0 chr17 375903 376035 -85062445 + FLAM_C SINE Alu 2 133 0 204 192 58 0 chr17 377583 377709 -85060771 + C-rich Low_complexity Low_complexity 1 133 0 186 174 0 0 chr17 377815 377861 -85060619 + G-rich Low_complexity Low_complexity 4 49 0 2117 87 4 0 chr17 378418 378712 -85059768 + AluSx SINE Alu 20 314 0 322 170 50 70 chr17 379006 379106 -85059374 + MIR3 SINE MIR 110 207 -1 2625 64 0 0 chr17 379842 380153 -85058327 + AluY SINE Alu 1 311 0 227 280 153 8 chr17 380414 380532 -85057948 + L2 LINE L2 3164 3298 -15 465 286 127 18 chr17 380549 380644 -85057836 - MIR SINE MIR -11 251 168 264 30 0 0 chr17 380644 380677 -85057803 + (TG)n Simple_repeat Simple_repeat 2 34 0 465 286 127 18 chr17 380677 380801 -85057679 - MIR SINE MIR -94 168 8 350 264 19 38 chr17 380962 381068 -85057412 - MIR SINE MIR -46 216 113 1466 186 3 40 chr17 381690 381991 -85056489 + AluJb SINE Alu 3 292 -20 576 216 78 39 chr17 382168 382400 -85056080 + AluJo SINE Alu 5 245 -67 303 26 0 0 chr17 382400 382438 -85056042 + AluJ/FLAM SINE Alu 39 76 -226 494 235 70 50 chr17 382438 382638 -85055842 + AluJb SINE Alu 11 214 -98 461 103 0 0 chr17 382635 382703 -85055777 + AluJ/FLAM SINE Alu 11 78 -234 * 1753 146 38 0 chr17 382703 382964 -85055516 + AluJb SINE Alu 13 283 -29 441 0 0 0 chr17 382964 383013 -85055467 + (CA)n Simple_repeat Simple_repeat 2 50 0 312 283 128 11 chr17 383401 383581 -85054899 + MIR SINE MIR 21 221 -41 1334 200 35 24 chr17 384044 384334 -85054146 + AluJb SINE Alu 1 293 -19 608 152 9 0 chr17 384349 384454 -85054026 - FLAM_C SINE Alu -37 106 1 2330 57 0 4 chr17 384537 384817 -85053663 + AluY SINE Alu 31 309 -2 1641 164 43 4 chr17 384910 385190 -85053290 + AluJo SINE Alu 1 291 -21 237 146 49 0 chr17 385312 385353 -85053127 + Alu SINE Alu 1 43 -259 1170 119 12 0 chr17 385353 385513 -85052967 + AluSg/x SINE Alu 125 286 -26 732 131 0 0 chr17 385613 385720 -85052760 - AluSq/x SINE Alu -203 109 3 859 195 153 0 chr17 385730 385992 -85052488 - L1M4 LINE L1 -869 5277 4976 468 0 0 0 chr17 386176 386228 -85052252 + (TG)n Simple_repeat Simple_repeat 1 52 0 2318 39 11 18 chr17 386228 386508 -85051972 - AluY SINE Alu -33 278 1 190 89 67 22 chr17 386543 386588 -85051892 + CT-rich Low_complexity Low_complexity 4 50 0 2101 187 102 20 chr17 386848 387346 -85051134 + L1MB7 LINE L1 5627 6165 -19 1688 210 13 3 chr17 387443 387752 -85050728 + AluJo SINE Alu 1 312 0 7186 39 2 0 chr17 389176 390534 -85047946 - L1PA4 LINE L1 -1 6154 4795 25477 31 4 7 chr17 390534 393779 -85044701 + L1PA4 LINE L1 1575 4810 -1336 279 247 65 0 chr17 393792 393869 -85044611 - HsTC2 DNA Tc2 -546 1352 1271 677 258 117 11 chr17 393876 394159 -85044321 - L1MC4 LINE L1 0 8042 7730 25 83 0 0 chr17 394397 394457 -85044023 + AT_rich Low_complexity Low_complexity 1 60 0 25 0 0 0 chr17 395021 395046 -85043434 + AT_rich Low_complexity Low_complexity 1 25 0 742 212 0 91 chr17 395121 395148 -85043332 + L1MA10 LINE L1 6124 6152 -182 2129 118 3 7 chr17 395148 395459 -85043021 - AluSg SINE Alu 0 310 2 742 212 0 91 chr17 395459 395662 -85042818 + L1MA10 LINE L1 6152 6333 -1 227 195 0 0 chr17 395998 396039 -85042441 + (TCTG)n Simple_repeat Simple_repeat 1 41 0 1979 170 0 0 chr17 396133 396433 -85042047 + AluSx SINE Alu 1 300 -12 262 267 61 30 chr17 396627 396758 -85041722 + MIR SINE MIR 77 211 -51 1566 28 0 42 chr17 397586 397798 -85040682 + L1PA3 LINE L1 5953 6155 0 394 254 60 0 chr17 399399 399533 -85038947 + L1MD2 LINE L1 6206 6347 -12 757 168 32 32 chr17 399534 399724 -85038756 + HsTC2 DNA Tc2 1602 1791 -107 2035 103 3 88 chr17 400945 401265 -85037215 - AluSx SINE Alu -19 293 1 10409 31 14 154 chr17 401345 402949 -85035531 + SVA Other Other 7 1386 0 194 287 83 37 chr17 403601 403709 -85034771 - MIR SINE MIR -148 114 2 1917 172 7 0 chr17 404386 404689 -85033791 + AluJb SINE Alu 1 305 -7 1909 134 0 19 chr17 407052 407366 -85031114 - AluSx SINE Alu -4 308 1 1668 168 7 10 chr17 407366 407662 -85030818 - AluJb SINE Alu -17 295 1 25 51 0 0 chr17 407705 407744 -85030736 + AT_rich Low_complexity Low_complexity 1 39 0 350 171 66 0 chr17 407771 407847 -85030633 - L1MB8 LINE L1 -2 6176 6096 2657 181 18 30 chr17 407867 408436 -85030044 - L1MB4 LINE L1 -12 6168 5607 2103 94 23 3 chr17 409710 410009 -85028471 - AluSx SINE Alu -7 305 1 339 273 104 50 chr17 410499 410727 -85027753 - MIR SINE MIR -19 243 23 2414 68 0 0 chr17 412359 412670 -85025810 - AluY SINE Alu 0 311 1 226 228 140 0 chr17 412777 412834 -85025646 + L2 LINE L2 3207 3271 -1 374 159 29 14 chr17 413105 413174 -85025306 - MLT1K LTR MaLR -8 580 511 333 0 0 0 chr17 413288 413325 -85025155 + (GA)n Simple_repeat Simple_repeat 2 38 0 387 0 0 0 chr17 413348 413391 -85025089 + (TG)n Simple_repeat Simple_repeat 2 44 0 1887 100 59 0 chr17 413524 413794 -85024686 + AluSc SINE Alu 11 296 -13 305 305 104 19 chr17 413935 414089 -85024391 - MIR SINE MIR -79 183 17 345 130 40 30 chr17 414121 414221 -85024259 + CT-rich Low_complexity Low_complexity 2 102 0 1912 143 13 0 chr17 414244 414552 -85023928 - AluSx SINE Alu 0 312 1 2286 96 0 0 chr17 415586 415889 -85022591 - AluSc SINE Alu -6 303 1 1702 163 10 10 chr17 415892 416186 -85022294 - AluSx SINE Alu -14 298 5 253 188 125 0 chr17 417221 417285 -85021195 + MER94 DNA DNA 4 75 -59 2204 119 6 26 chr17 417431 417775 -85020705 - MER1B DNA MER1_type 0 337 1 249 260 185 17 chr17 418031 418204 -85020276 + L2 LINE L2 1597 1798 -1516 867 198 8 118 chr17 418206 418443 -85020037 - MER58A DNA MER1_type -3 221 11 1068 282 72 32 chr17 418467 418571 -85019909 + L2 LINE L2 1839 1937 -1377 1719 110 0 4 chr17 418571 418808 -85019672 - AluSg SINE Alu -19 291 56 2235 98 0 0 chr17 418813 419119 -85019361 - AluSq SINE Alu -7 306 1 1068 282 72 32 chr17 419119 419479 -85019001 + L2 LINE L2 1940 2328 -986 2152 98 3 0 chr17 419483 419778 -85018702 - AluSq SINE Alu -17 296 1 1130 233 32 0 chr17 419778 420027 -85018453 - MSTD-int LTR MaLR -1477 258 2 1166 194 85 62 chr17 420027 420481 -85017999 - MSTD LTR MaLR -2 426 1 768 311 81 58 chr17 420548 421123 -85017357 + L2 LINE L2 2370 2981 -332 2293 78 0 0 chr17 421123 421417 -85017063 + AluY SINE Alu 1 294 -17 768 311 81 58 chr17 421417 421757 -85016723 + L2 LINE L2 2981 3312 -1 1763 148 18 0 chr17 422283 422567 -85015913 - AluJb SINE Alu -13 299 11 309 26 0 0 chr17 422576 422614 -85015866 + (CCTG)n Simple_repeat Simple_repeat 2 39 0 42718 59 4 4 chr17 425072 430778 -85007702 - L1P2 LINE L1 -439 5715 11 313 285 40 99 chr17 430830 430981 -85007499 + MIR3 SINE MIR 56 197 -11 2287 88 0 3 chr17 431089 431395 -85007085 - AluSq SINE Alu -8 305 1 1625 156 0 8 chr17 431734 431990 -85006490 - AluJb SINE Alu -54 258 5 1650 182 7 0 chr17 434385 434682 -85003798 - AluJb SINE Alu -13 299 1 292 194 0 0 chr17 434948 435010 -85003470 + L1MA3 LINE L1 5104 5165 -981 519 118 24 0 chr17 435064 435149 -85003331 - L1M LINE L1 -784 5396 5310 2093 181 37 18 chr17 436534 436988 -85001492 + L1MA3 LINE L1 5838 6300 -5 1269 172 38 34 chr17 437104 437395 -85001085 - AluJo SINE Alu -20 292 1 189 94 0 0 chr17 439037 439069 -84999411 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 2069 90 11 0 chr17 439072 439350 -84999130 - AluSp SINE Alu -32 281 1 279 0 0 0 chr17 439515 439546 -84998934 + (TG)n Simple_repeat Simple_repeat 1 31 0 2202 92 0 19 chr17 439563 439880 -84998600 - AluY SINE Alu 0 311 1 198 0 0 0 chr17 441557 441579 -84996901 + (TG)n Simple_repeat Simple_repeat 1 22 0 2007 90 14 4 chr17 441579 441858 -84996622 - AluSq SINE Alu -31 282 1 183 216 0 0 chr17 442587 442624 -84995856 + L2 LINE L2 3232 3268 -4 1654 166 7 24 chr17 442670 442966 -84995514 - AluSx SINE Alu -21 291 1 1347 143 4 30 chr17 443131 443361 -84995119 - AluJo SINE Alu -16 296 73 1151 211 12 37 chr17 443616 443858 -84994622 - L1MC1 LINE L1 0 6333 6098 946 168 0 6 chr17 443862 444023 -84994457 - FAM SINE Alu -10 175 16 1793 170 10 3 chr17 444065 444371 -84994109 + AluJb SINE Alu 1 308 -4 273 151 0 0 chr17 444379 444432 -84994048 + GA-rich Low_complexity Low_complexity 4 56 0 2123 113 0 10 chr17 445375 445685 -84992795 + AluSx SINE Alu 1 307 -5 456 282 33 74 chr17 446303 446693 -84991787 + L1MEd LINE L1 895 1317 -1173 1807 159 0 7 chr17 446709 447010 -84991470 + AluJo SINE Alu 1 299 -13 344 268 212 45 chr17 447014 447375 -84991105 + L1ME LINE L1 5394 5822 -348 1132 180 0 9 chr17 447876 448087 -84990393 + AluJo SINE Alu 74 282 -30 2095 97 28 0 chr17 448502 448791 -84989689 - AluSx SINE Alu -15 297 1 1871 197 217 12 chr17 448791 449284 -84989196 + MLT1G1 LTR MaLR 2 595 0 245 116 23 0 chr17 450370 450413 -84988067 + Alu SINE Alu 1 44 -258 1933 119 0 0 chr17 450413 450707 -84987773 + AluY SINE Alu 5 298 -13 2463 48 3 0 chr17 450952 451262 -84987218 + AluY SINE Alu 1 311 0 225 0 0 0 chr17 453210 453235 -84985245 + (TG)n Simple_repeat Simple_repeat 2 26 0 23 0 0 0 chr17 455551 455574 -84982906 + AT_rich Low_complexity Low_complexity 1 23 0 1940 110 11 0 chr17 455727 456036 -84982444 - AluSx SINE Alu 0 312 1 675 227 28 90 chr17 456570 456820 -84981660 + MIR SINE MIR 23 248 -14 410 257 114 0 chr17 457213 457318 -84981162 - MIR SINE MIR -36 226 110 2306 70 0 7 chr17 457695 457995 -84980485 + AluSc SINE Alu 1 298 -11 216 0 0 0 chr17 458002 458026 -84980454 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2106 91 0 0 chr17 458865 459141 -84979339 + AluY SINE Alu 1 276 -35 186 43 0 0 chr17 459141 459164 -84979316 + (GAAAA)n Simple_repeat Simple_repeat 2 24 0 934 129 24 0 chr17 459165 459335 -84979145 + GA-rich Low_complexity Low_complexity 4 177 0 306 0 0 0 chr17 459337 459371 -84979109 + (CAGG)n Simple_repeat Simple_repeat 2 35 0 1749 151 18 0 chr17 459380 459664 -84978816 + AluJb SINE Alu 11 299 -13 789 311 82 58 chr17 460190 460529 -84977951 - L2 LINE L2 -1 3312 2983 2306 75 0 0 chr17 460529 460823 -84977657 - AluY SINE Alu -17 294 1 789 311 82 58 chr17 460823 461398 -84977082 - L2 LINE L2 -330 2983 2370 1166 191 82 59 chr17 461465 461919 -84976561 + MSTD LTR MaLR 1 426 -2 1157 225 32 0 chr17 461919 462168 -84976312 + MSTD-int LTR MaLR 2 258 -1477 2152 98 3 0 chr17 462168 462463 -84976017 + AluSq SINE Alu 1 296 -17 1068 282 72 32 chr17 462467 462827 -84975653 - L2 LINE L2 -986 2328 1984 2182 108 0 0 chr17 462827 463133 -84975347 + AluSq SINE Alu 1 306 -7 1719 110 0 4 chr17 463138 463375 -84975105 + AluSg SINE Alu 56 291 -19 1068 282 72 32 chr17 463375 463479 -84975001 - L2 LINE L2 -1333 1981 1839 867 198 8 118 chr17 463503 463740 -84974740 + MER58A DNA MER1_type 11 221 -3 243 259 184 23 chr17 463742 463916 -84974564 - L2 LINE L2 -1516 1798 1597 2215 116 6 26 chr17 464171 464515 -84973965 + MER1B DNA MER1_type 1 337 0 253 188 125 0 chr17 464661 464725 -84973755 - MER94 DNA DNA -59 75 4 1771 157 10 10 chr17 465760 466059 -84972421 + AluSx SINE Alu 5 303 -9 2286 96 0 0 chr17 466062 466365 -84972115 + AluSc SINE Alu 1 303 -6 1833 147 16 0 chr17 467384 467690 -84970790 + AluSx SINE Alu 1 311 -1 345 130 40 30 chr17 467719 467819 -84970661 + GA-rich Low_complexity Low_complexity 2 102 0 305 305 104 19 chr17 467851 468005 -84970475 + MIR SINE MIR 17 183 -79 1872 104 59 0 chr17 468146 468416 -84970064 - AluSc SINE Alu -13 296 11 423 0 0 0 chr17 468549 468596 -84969884 + (CA)n Simple_repeat Simple_repeat 2 48 0 405 0 0 0 chr17 468619 468664 -84969816 + (TC)n Simple_repeat Simple_repeat 2 46 0 2189 92 0 3 chr17 469049 469355 -84969125 + AluSc SINE Alu 1 305 -4 1180 62 0 7 chr17 469682 469828 -84968652 + AluSq/x SINE Alu 1 145 -168 2188 110 0 0 chr17 469828 470129 -84968351 + AluSx SINE Alu 1 301 -11 233 270 120 41 chr17 470142 470409 -84968071 + L1M4 LINE L1 3657 3944 -2202 418 281 35 9 chr17 470497 470611 -84967869 + L2 LINE L2 3197 3313 0 1645 181 35 84 chr17 470693 470934 -84967546 - Charlie1 DNA MER1_type -1 2760 2509 188 35 35 0 chr17 470934 470963 -84967517 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 1986 120 0 0 chr17 470967 471251 -84967229 - AluSg SINE Alu -26 284 1 1645 181 35 84 chr17 471251 471458 -84967022 - Charlie1 DNA MER1_type -255 2506 2329 1474 219 40 26 chr17 471461 471808 -84966672 - MLT1A1 LTR MaLR -2 363 12 712 167 7 211 chr17 471811 472105 -84966375 - Charlie1 DNA MER1_type -341 2420 2187 1023 261 71 25 chr17 472105 472499 -84965981 + L1MCc LINE L1 17 428 -5995 * 1106 226 46 77 chr17 472497 473127 -84965353 + L1MCc LINE L1 1278 1909 -4887 749 251 44 36 chr17 473122 473397 -84965083 + L1MCc LINE L1 2232 2508 -4614 * 285 294 46 0 chr17 473392 473501 -84964979 + L1MA9 LINE L1 6161 6274 -38 * 776 181 0 8 chr17 473533 473666 -84964814 + FLAM_A SINE Alu 1 132 -1 33 0 0 0 chr17 473691 473724 -84964756 + AT_rich Low_complexity Low_complexity 1 33 0 333 255 59 93 chr17 473732 473936 -84964544 + L1MCc LINE L1 2597 2793 -4329 275 102 61 0 chr17 473946 473995 -84964485 + L1MCc LINE L1 2920 2971 -4151 1583 240 108 14 chr17 473996 474496 -84963984 + L1M4 LINE L1 4074 4620 -1526 2082 106 3 7 chr17 474521 474824 -84963656 + AluSq SINE Alu 1 302 -11 1952 164 11 35 chr17 475142 475514 -84962966 + MER47A DNA MER2_type 4 366 0 1268 191 29 51 chr17 475537 475851 -84962629 + AluJo SINE Alu 4 310 -2 1652 191 7 10 chr17 475853 476157 -84962323 + AluJo SINE Alu 1 303 -9 1662 162 13 26 chr17 476681 476819 -84961661 + AluJo SINE Alu 1 139 -173 2074 109 0 3 chr17 476819 477112 -84961368 + AluSx SINE Alu 1 292 -20 2064 105 3 3 chr17 477112 477407 -84961073 + AluSc SINE Alu 1 296 -13 1662 162 13 26 chr17 477407 477570 -84960910 + AluJo SINE Alu 137 299 -13 406 207 256 0 chr17 477592 477713 -84960767 - MIR SINE MIR -62 200 49 2014 124 101 20 chr17 477957 478304 -84960176 + THE1C LTR MaLR 1 375 0 741 223 66 18 chr17 479124 479280 -84959200 - AluJo SINE Alu -12 300 134 2139 126 0 0 chr17 479280 479589 -84958891 - AluSx SINE Alu -3 309 1 189 320 90 58 chr17 479647 479803 -84958677 - MIR SINE MIR -20 242 82 527 316 163 14 chr17 479868 480150 -84958330 + L3 LINE CR1 590 913 -664 806 291 84 7 chr17 480156 480441 -84958039 + MER102b DNA MER1_type 35 341 0 405 252 72 9 chr17 480441 480552 -84957928 + L3 LINE CR1 907 1024 -553 1412 258 112 38 chr17 480801 481308 -84957172 + L3 LINE CR1 1010 1554 -23 1460 198 12 1 chr17 481327 481816 -84956664 + MER44D DNA MER2_type 1 604 -1 1095 53 0 0 chr17 482536 482668 -84955812 + AluSg SINE Alu 1 132 -178 2112 113 7 0 chr17 482669 482971 -84955509 + AluSg SINE Alu 1 304 -6 1461 145 4 0 chr17 483028 483255 -84955225 + MER44D DNA MER2_type 322 604 -1 1342 172 29 44 chr17 483266 483539 -84954941 + AluJo SINE Alu 12 280 -32 376 241 0 0 chr17 484585 484668 -84953812 - AluJo SINE Alu -3 299 217 827 160 7 7 chr17 484671 484821 -84953659 - AluJo SINE Alu -162 150 1 318 244 61 0 chr17 485023 485105 -84953375 + MIR3 SINE MIR 114 200 -8 214 356 53 53 chr17 485127 485335 -84953145 - L2 LINE L2 -220 3052 2845 1790 148 3 10 chr17 485370 485668 -84952812 - AluJb SINE Alu -16 296 1 1000 128 12 6 chr17 486608 486772 -84951708 - AluSg/x SINE Alu -9 301 137 1897 149 0 0 chr17 487980 488268 -84950212 + AluSx SINE Alu 13 300 -12 1603 166 7 0 chr17 488279 488550 -84949930 + AluJo SINE Alu 40 312 0 1838 137 10 3 chr17 488703 489009 -84949471 + AluSx SINE Alu 1 308 -4 918 227 21 5 chr17 489368 489562 -84948918 + MER58A DNA MER1_type 28 224 0 1171 233 129 20 chr17 489571 489919 -84948561 + L1ME3A LINE L1 5775 6160 -10 21 0 0 0 chr17 489924 489945 -84948535 + AT_rich Low_complexity Low_complexity 1 21 0 2066 100 0 27 chr17 490078 490378 -84948102 + AluSq SINE Alu 1 292 -21 2099 95 7 14 chr17 490859 491155 -84947325 + AluSg SINE Alu 1 294 -16 649 258 27 5 chr17 491258 491444 -84947036 + AluJo SINE Alu 120 309 -3 2177 93 6 13 chr17 491452 491763 -84946717 + AluSg SINE Alu 1 309 -1 1608 183 0 10 chr17 491992 492287 -84946193 + AluSx SINE Alu 1 292 -20 812 134 0 0 chr17 492869 492988 -84945492 - AluJb SINE Alu -12 300 182 332 73 0 0 chr17 492988 493029 -84945451 - Alu SINE Alu -245 63 23 1508 157 0 88 chr17 494375 494523 -84943957 + AluJo SINE Alu 1 108 -204 1905 122 0 17 chr17 494523 494811 -84943669 + AluSc SINE Alu 1 283 -26 1508 157 0 88 chr17 494811 494981 -84943499 + AluJo SINE Alu 108 291 -21 22 0 0 0 chr17 495293 495315 -84943165 + AT_rich Low_complexity Low_complexity 1 22 0 2233 101 0 0 chr17 495325 495622 -84942858 + AluSc SINE Alu 1 297 -12 223 259 52 0 chr17 495691 495749 -84942731 + L2 LINE L2 3151 3211 -61 266 290 154 43 chr17 495806 496085 -84942395 + L2 LINE L2 2448 2757 -557 245 310 9 35 chr17 496095 496211 -84942269 + Charlie7 DNA MER1_type 1 113 -2499 2310 85 7 0 chr17 496308 496613 -84941867 + AluSq SINE Alu 1 307 -6 1614 182 23 10 chr17 496635 496943 -84941537 + AluJo SINE Alu 1 312 0 4483 155 78 35 chr17 497124 498038 -84940442 - LTR13 LTR ERVK 0 954 2 362 323 0 23 chr17 498071 498201 -84940279 + L2 LINE L2 2942 3068 -245 317 284 44 77 chr17 498327 498510 -84939970 + L2 LINE L2 3137 3313 0 382 265 38 30 chr17 498632 498764 -84939716 + L2 LINE L2 3140 3272 0 2068 120 7 0 chr17 498933 499241 -84939239 + AluSq SINE Alu 1 310 -3 251 159 48 0 chr17 499702 499765 -84938715 + L1MA8 LINE L1 6225 6290 -1 1644 100 151 12 chr17 499766 500017 -84938463 + AluSx SINE Alu 1 286 -16 198 0 0 0 chr17 500020 500042 -84938438 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 1298 158 22 13 chr17 500055 500283 -84938197 + AluJb SINE Alu 58 287 -25 2187 101 0 0 chr17 500886 501184 -84937296 - AluY SINE Alu -13 298 1 2119 106 3 3 chr17 501246 501547 -84936933 - AluSg SINE Alu -9 301 1 481 146 0 0 chr17 501790 501872 -84936608 + L1PB3 LINE L1 6073 6154 0 1021 99 0 7 chr17 502140 502281 -84936199 + FRAM SINE Alu 18 157 -19 2233 97 3 0 chr17 502439 502749 -84935731 + AluSx SINE Alu 1 311 -1 2183 81 0 16 chr17 502826 503133 -84935347 + AluSx SINE Alu 1 302 -10 2445 49 7 0 chr17 504420 504724 -84933756 - AluSg SINE Alu -4 306 1 191 387 0 40 chr17 504780 504855 -84933625 + MIR SINE MIR 33 104 -158 22 70 0 0 chr17 505159 505202 -84933278 + AT_rich Low_complexity Low_complexity 1 43 0 327 154 35 71 chr17 505256 505343 -84933137 + AluYb8 SINE Alu 120 195 -113 664 72 0 52 chr17 505394 505491 -84932989 + FRAM SINE Alu 55 146 -30 327 234 109 70 chr17 505502 505630 -84932850 + L1ME4a LINE L1 5794 5926 -195 254 236 69 0 chr17 505828 505900 -84932580 - L1ME1 LINE L1 -8 6158 6082 1515 136 140 15 chr17 505903 506168 -84932312 + AluSx SINE Alu 1 298 -4 1129 184 0 10 chr17 506309 506516 -84931964 - AluJo SINE Alu -107 205 1 456 282 33 74 chr17 506532 506922 -84931558 - L1MEd LINE L1 -1173 1317 895 2163 125 0 13 chr17 508318 508629 -84929851 - AluSx SINE Alu -5 307 1 336 350 29 22 chr17 509440 509577 -84928903 - L2 LINE L2 -1 3271 3134 918 223 23 11 chr17 512327 512592 -84925888 + L1M4 LINE L1 4986 5253 -893 482 88 0 0 chr17 612830 612898 -84825582 - Alu SINE Alu -232 78 11 1876 124 9 73 chr17 612901 613216 -84825264 - AluSx SINE Alu -17 295 1 2062 66 0 0 chr17 613456 613698 -84824782 + AluSq SINE Alu 1 242 -71 812 158 0 0 chr17 614669 614789 -84823691 + AluJo SINE Alu 1 120 -192 1037 161 0 22 chr17 614790 614970 -84823510 - FRAM SINE Alu 0 176 1 21 36 0 0 chr17 614983 615011 -84823469 + AT_rich Low_complexity Low_complexity 1 28 0 935 124 0 28 chr17 615033 615178 -84823302 - FLAM_C SINE Alu -2 141 1 255 167 0 50 chr17 615196 615256 -84823224 + AluJo SINE Alu 130 186 -116 721 185 52 0 chr17 615281 615416 -84823064 + FRAM SINE Alu 10 151 -25 2240 113 0 28 chr17 615717 616035 -84822445 - AluSq SINE Alu 0 313 5 1071 83 0 0 chr17 617501 617634 -84820846 + AluSq/x SINE Alu 1 133 -179 1804 167 17 0 chr17 617636 617936 -84820544 + AluJb SINE Alu 1 305 -7 210 118 0 0 chr17 617936 617970 -84820510 + (GGGA)n Simple_repeat Simple_repeat 3 36 0 189 132 38 19 chr17 617963 618016 -84820464 + GA-rich Low_complexity Low_complexity 1 54 0 * 2134 118 17 0 chr17 618174 618463 -84820017 - AluSq SINE Alu -19 294 1 180 0 0 0 chr17 618472 618492 -84819988 + (TTTAA)n Simple_repeat Simple_repeat 3 22 0 2069 128 3 0 chr17 618492 618774 -84819706 - AluSx SINE Alu -29 283 1 2461 82 0 0 chr17 619926 620229 -84818251 - AluY SINE Alu -8 303 1 1928 139 35 3 chr17 620268 620555 -84817925 - AluJb SINE Alu -16 296 1 1279 226 35 41 chr17 620716 621083 -84817397 - MLT1A1 LTR MaLR 0 365 1 2294 86 3 13 chr17 621102 621404 -84817076 + AluSx SINE Alu 1 299 -13 281 297 0 0 chr17 621492 621556 -84816924 - MER2 DNA MER2_type 0 345 282 * 365 225 85 70 chr17 621531 621660 -84816820 - MER8 DNA MER2_type -60 179 49 1050 130 62 0 chr17 621799 621961 -84816519 - AluSg/x SINE Alu -7 305 134 2203 107 3 7 chr17 621961 622260 -84816220 - AluSg SINE Alu -12 298 1 844 136 0 0 chr17 622910 623083 -84815397 + FLAM_C SINE Alu 2 174 0 1059 109 24 6 chr17 623662 623827 -84814653 - Tigger5 DNA MER2_type 0 2323 2156 180 267 50 0 chr17 624474 624534 -84813946 - L2 LINE L2 -1406 1908 1846 180 267 50 0 chr17 624994 625054 -84813426 - L2 LINE L2 -1406 1908 1846 180 267 50 0 chr17 625189 625249 -84813231 - L2 LINE L2 -1406 1908 1846 183 267 50 0 chr17 625319 625379 -84813101 - L2 LINE L2 -1406 1908 1846 180 267 50 0 chr17 625514 625574 -84812906 - L2 LINE L2 -1406 1908 1846 180 267 50 0 chr17 625644 625704 -84812776 - L2 LINE L2 -1406 1908 1846 193 250 50 0 chr17 625774 625834 -84812646 - L2 LINE L2 -1406 1908 1846 183 267 50 0 chr17 625969 626029 -84812451 - L2 LINE L2 -1406 1908 1846 180 267 50 0 chr17 626164 626224 -84812256 - L2 LINE L2 -1406 1908 1846 193 250 50 0 chr17 626424 626484 -84811996 - L2 LINE L2 -1406 1908 1846 1192 179 0 9 chr17 627468 627686 -84810794 + MER46A DNA MER2_type 21 236 0 237 254 15 0 chr17 629963 630030 -84808450 + MIR SINE MIR 54 121 -141 209 193 0 18 chr17 631190 631247 -84807233 + GA-rich Low_complexity Low_complexity 2 57 0 23 0 0 0 chr17 632863 632886 -84805594 + AT_rich Low_complexity Low_complexity 1 23 0 2184 114 10 0 chr17 634677 634974 -84803506 - AluSx SINE Alu -12 300 1 823 147 0 16 chr17 634974 635103 -84803377 - AluJo/FLAM SINE Alu -185 127 1 2060 97 10 33 chr17 635248 635547 -84802933 - AluSx SINE Alu -20 292 1 329 287 66 12 chr17 635708 635813 -84802667 + MER5B DNA MER1_type 1 120 -58 2148 103 14 3 chr17 635813 636105 -84802375 - AluSc SINE Alu -14 295 1 329 287 66 12 chr17 636105 636166 -84802314 + MER5B DNA MER1_type 120 176 -2 2167 111 0 3 chr17 636976 637264 -84801216 - AluSx SINE Alu -25 287 1 1281 168 48 0 chr17 637304 637513 -84800967 - AluJo SINE Alu -92 220 2 1388 70 12 0 chr17 638066 638237 -84800243 + AluSg/x SINE Alu 135 307 -3 207 273 0 57 chr17 638914 639002 -84799478 + GA-rich Low_complexity Low_complexity 1 83 0 228 344 27 0 chr17 639621 639741 -84798739 - MER5A DNA MER1_type -5 173 47 276 257 122 68 chr17 641259 641415 -84797065 - L1ME4a LINE L1 -3 6118 5943 1850 156 0 14 chr17 641415 641710 -84796770 + AluJb SINE Alu 1 291 -21 276 257 122 68 chr17 641710 641790 -84796690 - L1ME4a LINE L1 -178 5943 5869 267 188 0 0 chr17 641855 641903 -84796577 + FAM SINE Alu 120 167 -12 309 336 73 0 chr17 642008 642118 -84796362 - L1ME4a LINE L1 -611 5510 5393 215 296 56 28 chr17 642264 642372 -84796108 - MIR SINE MIR -61 201 91 2048 81 102 18 chr17 643464 643748 -84794732 + AluSx SINE Alu 5 312 0 607 275 40 108 chr17 643939 644785 -84793695 + L1ME2 LINE L1 5268 5951 -213 1819 186 0 16 chr17 644850 645157 -84793323 + AluJo SINE Alu 1 302 -10 2297 118 3 0 chr17 645159 645464 -84793016 + AluSx SINE Alu 1 306 -6 252 349 84 19 chr17 646496 646711 -84791769 - L1ME3 LINE L1 -6 6156 5928 1046 208 42 17 chr17 646826 647062 -84791418 - L1ME3 LINE L1 -449 5713 5472 1891 163 11 3 chr17 647072 647355 -84791125 - AluJo SINE Alu -27 285 1 1894 237 43 124 chr17 647371 647537 -84790943 - L1ME3 LINE L1 -1002 5144 4966 3583 139 42 6 chr17 647537 648026 -84790454 - L1MB7 LINE L1 -19 6165 5646 2292 114 3 13 chr17 648026 648341 -84790139 - AluSx SINE Alu 0 312 1 3583 139 42 6 chr17 648341 648490 -84789990 - L1MB7 LINE L1 -538 5646 5504 1894 237 43 124 chr17 648490 648828 -84789652 - L1ME3 LINE L1 -1180 4966 4602 318 26 0 0 chr17 648828 648867 -84789613 + (CA)n Simple_repeat Simple_repeat 1 39 0 1894 237 43 124 chr17 648867 648983 -84789497 - L1ME3 LINE L1 -1544 4602 4478 244 191 0 0 chr17 648983 649025 -84789455 - MER57A LTR ERV1 -67 336 295 1894 237 43 124 chr17 649025 649204 -84789276 - L1ME3 LINE L1 -1668 4478 4286 1243 152 108 50 chr17 649204 649481 -84788999 + AluJo SINE Alu 1 293 -19 1894 237 43 124 chr17 649481 649578 -84788902 - L1ME3 LINE L1 -1860 4286 4183 2149 101 13 44 chr17 649578 649896 -84788584 - AluSg SINE Alu -2 308 1 1894 237 43 124 chr17 649896 650143 -84788337 - L1ME3 LINE L1 -1963 4183 4052 1184 194 53 30 chr17 650949 651212 -84787268 - AluJb SINE Alu -17 295 27 * 1274 102 17 11 chr17 651210 651386 -84787094 - AluSg/x SINE Alu -2 310 134 2485 72 13 3 chr17 651386 651691 -84786789 - AluSq SINE Alu -5 308 1 1986 117 53 17 chr17 651702 652002 -84786478 - AluSx SINE Alu -1 311 1 244 283 168 0 chr17 652010 652123 -84786357 + L2 LINE L2 3182 3313 0 872 189 44 0 chr17 652693 652852 -84785628 - AluJo SINE Alu -146 166 1 198 387 108 35 chr17 652856 653280 -84785200 + L2 LINE L2 2814 3268 -4 2330 105 0 0 chr17 653287 653583 -84784897 - AluSx SINE Alu -16 296 1 1978 167 0 0 chr17 654079 654378 -84784102 + AluJo SINE Alu 1 299 -13 1140 199 83 15 chr17 656167 656433 -84782047 + L1MC1 LINE L1 6049 6332 -1 354 258 164 25 chr17 657118 657277 -84781203 + L1MC5 LINE L1 7744 7924 -37 305 240 221 0 chr17 658088 658192 -84780288 - MIR3 SINE MIR -4 204 78 690 162 0 0 chr17 659006 659117 -84779363 + AluJb SINE Alu 147 257 -55 223 328 74 33 chr17 659236 659358 -84779122 - MIR SINE MIR -59 203 77 1894 138 12 66 chr17 659629 659948 -84778532 - AluJo SINE Alu -10 302 1 230 244 0 0 chr17 660849 660894 -84777586 - L2 LINE L2 -7 3306 3262 195 289 0 0 chr17 661360 661405 -84777075 - L2 LINE L2 -7 3306 3262 191 250 0 0 chr17 661409 661445 -84777035 - L2 LINE L2 -16 3297 3262 238 290 67 104 chr17 661562 661755 -84776725 - MIR SINE MIR -10 252 67 516 303 97 21 chr17 661765 662003 -84776477 + MIR SINE MIR 7 262 0 1957 114 10 3 chr17 662139 662437 -84776043 + AluSx SINE Alu 1 300 -12 209 333 33 0 chr17 663153 663213 -84775267 + MIR SINE MIR 37 98 -110 307 77 0 0 chr17 663219 663258 -84775222 + (GGAA)n Simple_repeat Simple_repeat 2 40 0 875 91 0 57 chr17 663258 663502 -84774978 + (GGGA)n Simple_repeat Simple_repeat 1 230 0 312 165 0 26 chr17 663789 663854 -84774626 + Alu SINE Alu 1 53 -250 227 240 0 0 chr17 663864 663914 -84774566 + MIR SINE MIR 91 140 -122 491 198 0 0 chr17 663968 664049 -84774431 - AluJb SINE Alu -64 248 168 357 275 181 7 chr17 664053 664202 -84774278 + MIR SINE MIR 87 261 -1 1639 169 0 4 chr17 664241 664513 -84773967 + AluJo SINE Alu 1 271 -41 180 336 126 17 chr17 665135 665254 -84773226 - L2 LINE L2 -43 3229 3098 4120 191 65 37 chr17 665320 665773 -84772707 + L1MB7 LINE L1 4660 5099 -1085 423 0 0 0 chr17 665773 665820 -84772660 + (CA)n Simple_repeat Simple_repeat 1 47 0 4120 191 65 37 chr17 665820 666314 -84772166 + L1MB7 LINE L1 5099 5578 -606 2308 85 0 7 chr17 666314 666620 -84771860 - AluSx SINE Alu -8 304 1 4120 191 65 37 chr17 666620 667082 -84771398 + L1MB7 LINE L1 5578 6116 -68 1467 170 83 4 chr17 667082 667359 -84771121 - AluSx SINE Alu -13 299 1 4120 191 65 37 chr17 667359 667409 -84771071 + L1MB7 LINE L1 6116 6163 -21 199 336 65 42 chr17 667427 667644 -84770836 - L2 LINE L2 -244 3028 2807 341 292 119 40 chr17 669498 669724 -84768756 - MIR SINE MIR -6 256 13 1168 192 18 39 chr17 669800 670029 -84768451 - MER58A DNA MER1_type 0 224 1 1565 187 3 3 chr17 670728 671028 -84767452 + AluJo SINE Alu 1 300 -12 479 222 296 15 chr17 672966 673018 -84765462 - MIR SINE MIR 0 262 226 2129 98 24 0 chr17 673018 673313 -84765167 - AluSq SINE Alu -11 302 1 479 222 296 15 chr17 673313 673463 -84765017 - MIR SINE MIR -36 226 3 362 282 32 16 chr17 673603 673727 -84764753 - L2 LINE L2 -15 3298 3173 1942 100 3 65 chr17 673855 674164 -84764316 - AluSq SINE Alu -21 292 3 332 248 149 12 chr17 674199 674360 -84764120 + L1ME4a LINE L1 5533 5715 -406 308 273 45 18 chr17 674365 674475 -84764005 - L2 LINE L2 0 3313 3201 500 290 98 59 chr17 674500 674755 -84763725 + L2 LINE L2 2702 2966 -348 341 49 0 0 chr17 674841 674882 -84763598 - AluSg SINE Alu -201 99 59 1393 82 0 16 chr17 674884 675078 -84763402 - AluSx SINE Alu -121 191 1 951 222 40 48 chr17 675078 675429 -84763051 + L1MC5 LINE L1 7161 7508 -453 1373 159 41 44 chr17 675440 675735 -84762745 + AluJo SINE Alu 1 294 -18 659 152 67 42 chr17 675779 675944 -84762536 + L1MC3 LINE L1 7617 7785 0 631 174 144 0 chr17 675974 676106 -84762374 + MSTD LTR MaLR 3 153 -243 512 275 69 72 chr17 676108 676413 -84762067 - L2 LINE L2 -1 3312 3009 1088 94 0 13 chr17 676443 676592 -84761888 - AluSq/x SINE Alu -161 151 5 960 223 83 55 chr17 676597 676924 -84761556 - MLT1C LTR MaLR -126 341 6 885 208 35 10 chr17 676933 677135 -84761345 - L1MC5 LINE L1 -1095 6866 6660 1951 158 0 0 chr17 677299 677603 -84760877 - AluJo SINE Alu -8 304 1 1364 92 0 0 chr17 677629 677802 -84760678 + AluY SINE Alu 1 173 -138 2037 103 0 3 chr17 677802 678092 -84760388 + AluY SINE Alu 8 296 -15 1853 119 0 41 chr17 678147 678462 -84760018 + AluSg SINE Alu 1 303 0 242 267 44 0 chr17 678643 678733 -84759747 + L1ME4a LINE L1 5955 6048 -73 399 302 114 0 chr17 680729 680878 -84757602 + LTR33 LTR ERVL 356 521 0 357 298 66 50 chr17 680878 681059 -84757421 + L1ME4a LINE L1 5846 6029 -92 1641 128 0 8 chr17 681064 681337 -84757143 - AluSx SINE Alu 0 309 39 205 227 303 0 chr17 682508 682574 -84755906 - MIR SINE MIR -73 135 50 694 309 35 43 chr17 682647 682726 -84755754 - MIR SINE MIR -1 261 183 2089 111 6 16 chr17 682726 683041 -84755439 - AluSx SINE Alu 0 312 1 694 309 35 43 chr17 683041 683217 -84755263 - MIR SINE MIR -79 183 8 1112 82 0 0 chr17 683411 683557 -84754923 + AluSq/x SINE Alu 1 146 -166 1887 104 3 68 chr17 683557 683702 -84754778 + AluSx SINE Alu 1 115 -197 2178 89 13 13 chr17 683702 684005 -84754475 + AluY SINE Alu 1 303 -8 1887 104 3 68 chr17 684005 684185 -84754295 + AluSx SINE Alu 115 305 -7 2285 96 0 3 chr17 684563 684877 -84753603 + AluSp SINE Alu 1 313 0 2714 10 0 3 chr17 685365 685674 -84752806 + AluYa5 SINE Alu 1 308 -3 393 264 42 35 chr17 685682 685826 -84752654 - MER117 DNA MER1_type -34 163 19 2113 98 3 19 chr17 686173 686488 -84751992 - AluSg SINE Alu 0 310 1 1103 151 0 0 chr17 686944 687110 -84751370 - AluJb SINE Alu -12 300 135 1104 194 0 9 chr17 687114 687330 -84751150 + AluJo SINE Alu 67 280 -32 267 31 0 0 chr17 687332 687364 -84751116 + (GGGGA)n Simple_repeat Simple_repeat 5 36 0 1728 157 33 17 chr17 687690 687990 -84750490 - AluJb SINE Alu -7 305 1 2693 166 80 219 chr17 688144 689080 -84749400 + L1MC4 LINE L1 6461 7526 -516 1935 114 59 7 chr17 689080 689370 -84749110 + AluSx SINE Alu 1 305 -7 2693 166 80 219 chr17 689370 689528 -84748952 + L1MC4 LINE L1 7526 7275 -767 2116 108 3 19 chr17 689528 689842 -84748638 + AluSq SINE Alu 1 309 -4 2693 166 80 219 chr17 689842 690312 -84748168 + L1MC4 LINE L1 7274 7808 -234 753 165 49 18 chr17 690311 690475 -84748005 + L1MC4 LINE L1 7732 7900 -142 * 1133 160 37 0 chr17 690480 690668 -84747812 + AluJb SINE Alu 1 195 -117 291 93 0 0 chr17 690668 690711 -84747769 + (GGGGA)n Simple_repeat Simple_repeat 1 43 0 221 190 52 0 chr17 690711 690769 -84747711 + A-rich Low_complexity Low_complexity 5 65 0 467 203 0 3 chr17 690807 690902 -84747578 + L1MC4 LINE L1 7889 8040 -2 321 26 0 0 chr17 690912 690950 -84747530 + (TCTCCC)n Simple_repeat Simple_repeat 6 43 0 10368 29 8 106 chr17 690954 692486 -84745994 + SVA Other Other 2 1383 -3 200 241 148 111 chr17 693033 693249 -84745231 - MIR SINE MIR -37 225 2 1757 172 7 0 chr17 693926 694229 -84744251 + AluJb SINE Alu 1 305 -7 1491 172 39 26 chr17 703961 704269 -84734211 - AluJb SINE Alu 0 312 1 2576 183 170 58 chr17 704275 704818 -84733662 + L1MC4a LINE L1 6940 7578 -230 1470 169 55 0 chr17 704818 705091 -84733389 + AluJo SINE Alu 1 288 -24 2576 183 170 58 chr17 705091 705350 -84733130 + L1MC4a LINE L1 7578 7807 -1 286 267 61 30 chr17 706181 706312 -84732168 - MIR SINE MIR -51 211 77 1864 163 0 0 chr17 706506 706806 -84731674 - AluSx SINE Alu -12 300 1 227 195 0 0 chr17 706900 706941 -84731539 + (CAGA)n Simple_repeat Simple_repeat 1 41 0 776 208 0 91 chr17 707277 707480 -84731000 - L1MA10 LINE L1 -1 6333 6152 2009 114 3 7 chr17 707480 707791 -84730689 + AluSg SINE Alu 2 310 0 776 208 0 91 chr17 707791 707818 -84730662 - L1MA10 LINE L1 -182 6152 6124 25 0 0 0 chr17 707893 707918 -84730562 + AT_rich Low_complexity Low_complexity 1 25 0 25 83 0 0 chr17 708484 708544 -84729936 + AT_rich Low_complexity Low_complexity 1 60 0 712 258 117 11 chr17 708782 709065 -84729415 + L1MC4 LINE L1 7730 8042 0 287 247 65 0 chr17 709072 709149 -84729331 + HsTC2 DNA Tc2 1271 1352 -546 8802 26 0 1 chr17 709162 710181 -84728299 - L1P LINE L1 -1336 4810 3793 671 166 37 18 chr17 910181 910344 -84528136 + L1MB3 LINE L1 5976 6141 -42 2271 82 0 0 chr17 910345 910639 -84527841 + AluSx SINE Alu 1 294 -18 775 157 0 0 chr17 910672 910793 -84527687 - FRAM SINE Alu -14 162 42 789 174 8 8 chr17 910846 910978 -84527502 + FLAM_C SINE Alu 2 133 -10 2167 100 0 7 chr17 910984 911284 -84527196 + AluSg SINE Alu 3 300 -10 1241 159 4 41 chr17 911548 911818 -84526662 - AluSq SINE Alu -53 260 1 1679 164 20 7 chr17 912032 912337 -84526143 - AluJo SINE Alu -3 309 1 657 158 0 0 chr17 912500 912601 -84525879 + AluJ/FLAM SINE Alu 2 102 -210 809 131 0 8 chr17 912805 912935 -84525545 + AluSp/q SINE Alu 168 296 -17 954 150 131 77 chr17 912935 913077 -84525403 - AluJo SINE Alu -20 292 159 2059 115 0 10 chr17 913077 913390 -84525090 - AluSg SINE Alu 0 310 1 954 150 131 77 chr17 913390 913507 -84524973 - AluJo SINE Alu -153 159 19 339 252 36 29 chr17 913640 913779 -84524701 - L1M4 LINE L1 -985 5161 5022 895 97 15 15 chr17 913779 913913 -84524567 + AluSq/x SINE Alu 1 134 -179 1988 99 3 66 chr17 913965 914298 -84524182 - AluSx SINE Alu 0 312 1 232 301 54 0 chr17 914397 914490 -84523990 + L1MC4a LINE L1 6080 6177 -1631 486 154 240 29 chr17 914520 914624 -84523856 + AluJb SINE Alu 2 127 -185 2032 108 0 7 chr17 914751 915048 -84523432 - AluSx SINE Alu -17 295 1 932 67 7 22 chr17 915051 915186 -84523294 - AluSq/x SINE Alu -180 133 1 372 281 221 15 chr17 915193 915524 -84522956 + L2 LINE L2 1693 2091 -1223 2155 80 0 13 chr17 915585 915886 -84522594 - AluSc SINE Alu -12 297 1 783 176 5 93 chr17 915985 916136 -84522344 + AluJb SINE Alu 137 269 -43 2277 68 7 3 chr17 916136 916444 -84522036 + AluY SINE Alu 1 309 -2 783 176 5 93 chr17 916444 916485 -84521995 + AluJb SINE Alu 269 312 0 496 291 104 33 chr17 916699 917004 -84521476 + L2 LINE L2 2736 3061 -211 2234 88 3 3 chr17 917068 917374 -84521106 - AluSg SINE Alu -4 306 1 398 286 24 52 chr17 917580 917790 -84520690 - L2 LINE L2 -211 3061 2858 2353 67 3 0 chr17 918119 918417 -84520063 + AluSx SINE Alu 1 299 -13 296 292 18 44 chr17 918422 918535 -84519945 + L2 LINE L2 3163 3272 0 2128 105 0 7 chr17 918646 918951 -84519529 - AluY SINE Alu -8 303 1 715 183 0 30 chr17 919238 919369 -84519111 - FLAM_C SINE Alu -15 128 2 259 318 67 72 chr17 919463 919658 -84518822 + L2 LINE L2 3001 3194 -78 1070 136 28 0 chr17 919662 919839 -84518641 - AluSg/x SINE Alu 0 310 129 1996 116 0 7 chr17 919844 920160 -84518320 - AluSx SINE Alu 0 314 1 241 95 71 0 chr17 920372 920414 -84518066 + L2 LINE L2 3264 3308 -5 2178 100 6 3 chr17 920491 920802 -84517678 - AluSq SINE Alu -1 312 1 235 270 50 0 chr17 920810 920910 -84517570 - L1P LINE L1 -781 5370 5266 442 179 0 13 chr17 921069 921147 -84517333 - FLAM SINE Alu -17 126 50 1758 159 37 7 chr17 921212 921507 -84516973 + AluJb SINE Alu 1 304 -8 248 268 0 18 chr17 921522 921578 -84516902 + AluSg/x SINE Alu 124 178 -122 327 167 95 36 chr17 921647 921731 -84516749 - L1MA9 LINE L1 0 6312 6224 2136 105 39 60 chr17 921879 922098 -84516382 - THE1C LTR MaLR -2 373 164 1912 137 0 19 chr17 922098 922413 -84516067 + AluSx SINE Alu 3 311 -1 2136 105 39 60 chr17 922413 922574 -84515906 - THE1C LTR MaLR -211 164 1 2080 113 0 0 chr17 922669 922961 -84515519 - AluSx SINE Alu -20 292 1 699 281 186 30 chr17 922984 923382 -84515098 - MLT1K LTR MaLR -10 578 119 791 271 42 42 chr17 923528 923603 -84514877 - L1M4 LINE L1 -1440 4706 4632 2186 63 0 78 chr17 923603 923937 -84514543 - AluY SINE Alu -3 308 1 791 271 42 42 chr17 923937 924238 -84514242 - L1M4 LINE L1 -1513 4633 4330 1124 107 0 34 chr17 924261 924438 -84514042 + AluSq SINE Alu 1 171 -142 892 239 83 73 chr17 924618 924777 -84513703 - HAL1 LINE L1 -5 2502 2346 1726 131 0 64 chr17 924777 925091 -84513389 - AluSx SINE Alu -18 294 1 2002 117 0 13 chr17 925091 925389 -84513091 - AluSx SINE Alu -18 294 1 892 239 83 73 chr17 925389 925500 -84512980 - HAL1 LINE L1 -161 2346 2238 1946 127 3 7 chr17 925500 925808 -84512672 - AluSp SINE Alu -6 307 1 892 239 83 73 chr17 925808 926054 -84512426 - HAL1 LINE L1 -269 2238 1979 1419 269 56 87 chr17 926432 926503 -84511977 + L1MC4 LINE L1 6875 6947 -1095 1553 165 3 32 chr17 926503 926812 -84511668 + AluJo SINE Alu 1 300 -12 1419 269 56 87 chr17 926812 926965 -84511515 + L1MC4 LINE L1 6947 7103 -939 2025 125 0 3 chr17 926965 927262 -84511218 + AluSx SINE Alu 1 296 -16 1419 269 56 87 chr17 927262 927676 -84510804 + L1MC4 LINE L1 7103 7529 -513 2152 106 0 0 chr17 927676 927979 -84510501 - AluSx SINE Alu -9 303 1 1419 269 56 87 chr17 927979 928106 -84510374 + L1MC4 LINE L1 7529 7658 -384 1400 143 68 34 chr17 928106 928399 -84510081 + AluJo SINE Alu 1 303 -9 1419 269 56 87 chr17 928399 928708 -84509772 + L1MC4 LINE L1 7658 7918 -124 311 224 247 52 chr17 928708 928882 -84509598 + LTR50 LTR ERVL 1 208 -587 856 170 78 61 chr17 928897 928991 -84509489 + L1M4 LINE L1 4934 5025 -1121 2185 60 23 10 chr17 928991 929290 -84509190 - AluY SINE Alu -8 303 1 856 170 78 61 chr17 929290 929425 -84509055 + L1M4 LINE L1 5025 5167 -979 1651 116 27 37 chr17 929426 929720 -84508760 + AluJb SINE Alu 1 291 -21 906 68 0 23 chr17 929728 929861 -84508619 + AluSq/x SINE Alu 1 130 -182 2230 97 7 0 chr17 929988 930297 -84508183 + AluY SINE Alu 1 311 0 2247 74 3 7 chr17 930313 930623 -84507857 + AluY SINE Alu 1 309 -2 432 0 0 0 chr17 930954 931002 -84507478 + (TA)n Simple_repeat Simple_repeat 2 49 0 387 133 0 112 chr17 931004 931102 -84507378 - LTR9 LTR ERV1 -90 522 436 2114 74 10 10 chr17 931102 931399 -84507081 - AluY SINE Alu -14 297 1 477 240 4 28 chr17 931407 931546 -84506934 + L1MD2 LINE L1 6235 7983 -12 1593 168 13 35 chr17 931861 932036 -84506444 - AluJo SINE Alu -9 303 137 2110 93 0 60 chr17 932036 932369 -84506111 - AluSp SINE Alu 0 313 1 1593 168 13 35 chr17 932369 932503 -84505977 - AluJo SINE Alu -175 137 1 246 32 0 0 chr17 932506 932537 -84505943 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 641 188 0 0 chr17 932551 932652 -84505828 - AluJ/FLAM SINE Alu -210 102 2 289 113 31 216 chr17 932654 932751 -84505729 - AluJo SINE Alu -159 143 65 854 107 0 0 chr17 932766 932888 -84505592 + AluSg/x SINE Alu 176 297 -15 406 93 0 0 chr17 932889 932943 -84505537 + Alu SINE Alu 2 55 -256 1897 97 3 58 chr17 934230 934540 -84503940 - AluY SINE Alu -18 293 1 2262 50 0 31 chr17 934594 934915 -84503565 + AluY SINE Alu 1 311 0 1832 140 0 37 chr17 934930 935251 -84503229 + AluSx SINE Alu 1 309 -3 351 267 168 31 chr17 935668 935829 -84502651 + MLT1K LTR MaLR 315 497 -91 795 163 0 8 chr17 935837 935966 -84502514 - FLAM_C SINE Alu -5 128 1 1384 171 36 26 chr17 937537 937841 -84500639 + AluJo SINE Alu 1 307 -5 1919 101 14 20 chr17 937927 938224 -84500256 + AluY SINE Alu 1 295 -16 1892 119 10 13 chr17 938578 938880 -84499600 + AluSx SINE Alu 1 301 -11 2252 97 0 3 chr17 938959 939270 -84499210 + AluSx SINE Alu 1 310 -2 1743 112 4 14 chr17 940004 940280 -84498200 - AluSg SINE Alu -7 303 31 1903 42 36 46 chr17 940341 940647 -84497833 + AluY SINE Alu 2 304 -7 377 210 49 0 chr17 941117 941198 -84497282 + L1ME LINE L1 5529 5613 -508 1011 139 0 18 chr17 941251 941416 -84497064 + FRAM SINE Alu 1 162 -4 2231 57 10 14 chr17 941557 941853 -84496627 - AluY SINE Alu -16 295 1 1629 151 21 0 chr17 941881 942172 -84496308 + AluSg SINE Alu 1 297 -13 423 227 62 39 chr17 942303 942431 -84496049 - L1MB7 LINE L1 -10 6174 6044 1362 172 50 17 chr17 942440 942737 -84495743 - AluJb SINE Alu -5 307 1 243 259 82 12 chr17 942851 942936 -84495544 - MLT1H LTR MaLR -50 499 409 973 230 65 21 chr17 942968 943259 -84495221 - MLT1H LTR MaLR -245 304 1 1166 114 12 0 chr17 943354 943520 -84494960 - AluSq SINE Alu -19 294 127 831 112 0 0 chr17 943521 943646 -84494834 + (TA)n Simple_repeat Simple_repeat 1 125 0 2265 78 0 34 chr17 943646 943968 -84494512 - AluY SINE Alu 0 311 1 288 293 99 26 chr17 944297 944488 -84493992 - L1M4 LINE L1 -1466 4680 4476 294 352 7 7 chr17 944492 944634 -84493846 - L1M4 LINE L1 -2313 3833 3692 483 91 0 0 chr17 944749 944815 -84493665 - FLAM SINE Alu -32 111 46 208 62 0 31 chr17 944815 944847 -84493633 + (TCTG)n Simple_repeat Simple_repeat 1 31 0 276 77 0 0 chr17 944873 944912 -84493568 + (TCTA)n Simple_repeat Simple_repeat 1 39 0 307 167 0 0 chr17 944913 944961 -84493519 - AluS SINE Alu -26 274 227 357 62 0 0 chr17 944961 945009 -84493471 + (TCTA)n Simple_repeat Simple_repeat 1 48 0 1821 117 0 18 chr17 945010 945291 -84493189 - AluSx SINE Alu -36 276 1 225 0 0 0 chr17 945297 945322 -84493158 + (T)n Simple_repeat Simple_repeat 1 25 0 388 231 51 8 chr17 945415 945532 -84492948 - L1ME4a LINE L1 -45 6076 5955 1751 140 3 29 chr17 945690 945997 -84492483 - AluJo SINE Alu -12 300 2 2079 94 0 17 chr17 946006 946303 -84492177 - AluSc SINE Alu -17 292 1 2268 93 0 0 chr17 947299 947600 -84490880 + AluSx SINE Alu 1 301 -11 1393 139 154 23 chr17 947719 947985 -84490495 - AluJb SINE Alu -1 301 1 845 128 0 47 chr17 948063 948198 -84490282 + FLAM_C SINE Alu 1 130 -182 1928 144 10 7 chr17 948198 948504 -84489976 + AluSx SINE Alu 1 307 -5 845 128 0 47 chr17 948504 948517 -84489963 + FLAM_C SINE Alu 130 142 -170 2206 56 42 7 chr17 948575 948862 -84489618 + AluY SINE Alu 1 297 -14 259 282 24 12 chr17 948877 948962 -84489518 - MIR SINE MIR -80 182 97 1003 106 0 59 chr17 949076 949246 -84489234 - AluSc SINE Alu -148 161 2 2217 79 0 13 chr17 950816 951120 -84487360 - AluY SINE Alu -11 300 1 180 0 0 0 chr17 951206 951226 -84487254 + (A)n Simple_repeat Simple_repeat 1 20 0 232 156 0 0 chr17 951376 951421 -84487059 + Alu SINE Alu 256 300 0 711 262 59 0 chr17 951434 951621 -84486859 + MIR SINE MIR 65 262 0 1703 166 13 10 chr17 951640 951947 -84486533 + AluJo SINE Alu 5 312 0 1809 81 37 7 chr17 952304 952604 -84485876 + AluSg SINE Alu 1 308 0 1926 98 13 36 chr17 952940 953245 -84485235 - AluSq SINE Alu -15 298 1 1919 114 21 7 chr17 953333 953623 -84484857 - AluSc SINE Alu -15 294 1 1903 117 21 24 chr17 953630 953920 -84484560 - AluSx SINE Alu -23 289 1 312 225 42 108 chr17 954180 954300 -84484180 + MIR SINE MIR 15 126 -136 402 276 68 44 chr17 954446 954583 -84483897 + L1ME LINE L1 5307 5452 -669 1538 140 51 27 chr17 954583 954875 -84483605 + AluSx SINE Alu 1 299 -13 402 276 68 44 chr17 954875 954918 -84483562 + L1ME LINE L1 5452 5492 -629 1910 135 0 10 chr17 954981 955277 -84483203 + AluSx SINE Alu 1 293 -19 29 0 0 0 chr17 955277 955306 -84483174 + AT_rich Low_complexity Low_complexity 1 29 0 2022 45 0 11 chr17 955377 955641 -84482839 - AluY SINE Alu -12 299 39 1475 253 54 83 chr17 955660 956354 -84482126 + L1MC4a LINE L1 5011 5724 -430 2122 105 3 0 chr17 956354 956650 -84481830 - AluSx SINE Alu -15 297 1 1475 253 54 83 chr17 956650 956790 -84481690 + L1MC4a LINE L1 5724 5343 -811 1609 111 0 137 chr17 956790 957132 -84481348 - AluSx SINE Alu -7 295 1 1475 253 54 83 chr17 957132 957239 -84481241 + L1MC4a LINE L1 5342 5451 -703 1375 274 116 18 chr17 957411 958030 -84480450 + L1ME4a LINE L1 5445 6120 -1 788 154 15 8 chr17 958518 958648 -84479832 - FLAM_C SINE Alu -11 132 2 2378 52 0 7 chr17 958827 959148 -84479332 - AluSg SINE Alu 0 319 1 2195 61 29 0 chr17 959156 959436 -84479044 - AluY SINE Alu -23 288 1 909 116 0 0 chr17 959449 959570 -84478910 - FLAM_C SINE Alu -12 121 1 1028 137 25 6 chr17 959794 959955 -84478525 + AluSx SINE Alu 61 224 -88 1137 151 16 68 chr17 959955 960032 -84478448 - AluJo SINE Alu -73 239 160 4678 138 44 5 chr17 960032 960788 -84477692 + LTR1 LTR ERV1 1 785 0 1137 151 16 68 chr17 960788 960962 -84477518 - AluJo SINE Alu -152 160 1 1994 142 0 0 chr17 961124 961426 -84477054 + AluSx SINE Alu 1 302 -10 1372 144 0 25 chr17 961781 962017 -84476463 - AluJb SINE Alu -24 288 59 2138 111 7 3 chr17 962024 962331 -84476149 - AluSx SINE Alu -4 308 1 2036 128 0 0 chr17 962429 962725 -84475755 - AluSx SINE Alu -16 296 1 413 141 99 91 chr17 962842 962913 -84475567 + L1MC4 LINE L1 7921 7995 -47 1698 141 24 14 chr17 962913 963203 -84475277 - AluSx SINE Alu -19 293 1 413 141 99 91 chr17 963203 963252 -84475228 + L1MC4 LINE L1 7995 8042 0 382 219 109 17 chr17 963391 963510 -84474970 + L1M4 LINE L1 2784 2913 -3233 2194 101 0 13 chr17 963741 964057 -84474423 - AluSx SINE Alu 0 312 1 841 123 8 0 chr17 964060 964190 -84474290 - AluSq/x SINE Alu -182 131 1 1907 123 24 7 chr17 966280 966572 -84471908 + AluSq SINE Alu 1 297 -16 2327 93 0 3 chr17 967215 967526 -84470954 - AluSx SINE Alu -2 310 1 1284 157 31 100 chr17 967526 967690 -84470790 - AluSq SINE Alu -5 298 165 225 0 0 0 chr17 967690 967715 -84470765 + (TTTTA)n Simple_repeat Simple_repeat 3 27 0 1284 157 31 100 chr17 967715 967869 -84470611 - AluSq SINE Alu -138 165 2 1206 127 0 64 chr17 968039 968322 -84470158 - AluSq SINE Alu -11 302 38 194 318 14 99 chr17 968688 968911 -84469569 + L2 LINE L2 2858 3061 -211 539 303 134 70 chr17 969753 970284 -84468196 + L2 LINE L2 1616 2230 -1084 1702 103 0 26 chr17 970284 970557 -84467923 - AluSx SINE Alu -46 266 1 539 303 134 70 chr17 970557 970933 -84467547 + L2 LINE L2 2230 2581 -733 2327 70 0 3 chr17 971097 971395 -84467085 - AluY SINE Alu -14 297 1 1780 104 0 83 chr17 971395 971732 -84466748 - AluSx SINE Alu -3 309 1 2182 107 0 0 chr17 971888 972188 -84466292 - AluSx SINE Alu -12 300 1 532 273 116 12 chr17 972193 972365 -84466115 + MIR SINE MIR 71 260 -2 22 0 0 0 chr17 972402 972424 -84466056 + AT_rich Low_complexity Low_complexity 1 22 0 1808 119 0 14 chr17 972425 972731 -84465749 - AluSg SINE Alu 0 302 1 399 232 8 72 chr17 972741 972866 -84465614 + L2 LINE L2 3197 3313 0 1955 124 24 7 chr17 973079 973377 -84465103 + AluSp SINE Alu 1 303 -10 1930 122 14 0 chr17 973408 973702 -84464778 + AluSx SINE Alu 1 298 -14 916 137 0 0 chr17 973734 973865 -84464615 - FLAM_C SINE Alu -2 131 1 331 212 111 12 chr17 974227 974318 -84464162 - MIR SINE MIR -20 188 89 1533 163 46 14 chr17 974383 974666 -84463814 - AluSx SINE Alu -20 292 1 1375 166 3 62 chr17 974670 974978 -84463502 - AluJo SINE Alu -22 290 1 2165 104 24 6 chr17 974978 975315 -84463165 - HSMAR2 DNA Mariner -958 344 2 669 172 0 33 chr17 975362 975484 -84462996 + FLAM_C SINE Alu 1 118 -15 1765 129 22 7 chr17 975632 975933 -84462547 - AluSx SINE Alu 0 305 1 2373 201 50 56 chr17 975934 976191 -84462289 - L1ME2 LINE L1 -34 6130 5873 1462 163 13 60 chr17 976191 976365 -84462115 - AluJo SINE Alu -18 294 138 2172 91 0 7 chr17 976365 976663 -84461817 - AluSc SINE Alu -13 296 1 1462 163 13 60 chr17 976663 976788 -84461692 - AluJo SINE Alu -174 138 9 2373 201 50 56 chr17 976788 977538 -84460942 - L1ME2 LINE L1 -291 5873 5120 2191 93 6 3 chr17 977538 977850 -84460630 + AluSq SINE Alu 1 313 0 2203 94 3 0 chr17 977856 978155 -84460325 + AluSp SINE Alu 5 304 -9 2373 201 50 56 chr17 978155 978372 -84460108 - L1ME2 LINE L1 -1049 5115 4865 2191 72 0 35 chr17 978372 978691 -84459789 - AluY SINE Alu -3 308 1 2373 201 50 56 chr17 978691 978858 -84459622 - L1ME2 LINE L1 -1299 4865 4699 1204 141 9 18 chr17 978881 979108 -84459372 - AluSx SINE Alu -29 283 59 257 274 61 61 chr17 979163 979408 -84459072 - L1ME2 LINE L1 -1958 4188 3944 464 139 0 0 chr17 979890 979962 -84458518 + AluS SINE Alu 2 73 -239 1982 96 13 20 chr17 979976 980278 -84458202 - AluY SINE Alu -11 300 1 460 283 75 0 chr17 980278 980437 -84458043 - L1M4 LINE L1 -1270 4876 4706 2136 117 3 0 chr17 980439 980748 -84457732 - AluSx SINE Alu -2 310 1 756 164 14 29 chr17 980758 980898 -84457582 - FRAM SINE Alu -15 161 24 1681 153 11 0 chr17 980911 981186 -84457294 - AluJb SINE Alu -3 309 32 1507 171 21 7 chr17 981260 981422 -84457058 - AluJo SINE Alu -13 299 130 2027 107 0 0 chr17 981422 981703 -84456777 - AluY SINE Alu -22 289 9 1507 171 21 7 chr17 981703 981826 -84456654 - AluJo SINE Alu -182 130 10 2032 213 95 131 chr17 981838 981909 -84456571 - L1M4 LINE L1 -1679 4467 4395 1984 121 13 10 chr17 981909 982216 -84456264 + AluSx SINE Alu 1 308 -4 2032 213 95 131 chr17 982216 982426 -84456054 - L1M4 LINE L1 -1751 4395 4179 1988 119 20 3 chr17 982426 982729 -84455751 - AluSx SINE Alu -4 308 1 2032 213 95 131 chr17 982729 983165 -84455315 - L1M4 LINE L1 -1967 4179 3682 715 141 16 25 chr17 983165 983286 -84455194 - FLAM_C SINE Alu -15 128 9 2032 213 95 131 chr17 983286 983642 -84454838 - L1M4 LINE L1 -2464 3682 3315 203 313 167 0 chr17 984391 984487 -84453993 - MER5A DNA MER1_type -1 188 77 213 303 107 73 chr17 984532 984747 -84453733 + L2 LINE L2 3021 3246 -26 405 0 0 0 chr17 984747 984792 -84453688 + (TTA)n Simple_repeat Simple_repeat 2 46 0 213 303 107 73 chr17 984792 984810 -84453670 + L2 LINE L2 3246 3262 -10 820 133 0 30 chr17 986114 986249 -84452231 - AluSq/x SINE Alu -181 132 2 351 0 0 0 chr17 986324 986363 -84452117 + (TG)n Simple_repeat Simple_repeat 2 40 0 1355 190 3 33 chr17 986426 986731 -84451749 + AluJo SINE Alu 9 304 -8 1094 135 0 16 chr17 986873 987058 -84451422 + AluSq SINE Alu 54 235 -78 1440 191 3 24 chr17 987164 987462 -84451018 + AluJo SINE Alu 13 304 -8 1531 198 0 6 chr17 987550 987863 -84450617 + AluJb SINE Alu 1 311 -1 643 175 175 35 chr17 987977 988205 -84450275 - HAL1b LINE L1 -702 646 387 1805 105 16 35 chr17 988215 988530 -84449950 - AluY SINE Alu -2 309 1 1834 95 46 18 chr17 989659 989943 -84448537 + AluSg SINE Alu 1 292 -18 856 231 64 8 chr17 989953 990187 -84448293 + L1MB7 LINE L1 5937 6183 -1 1920 90 4 11 chr17 990252 990519 -84447961 + AluSx SINE Alu 1 265 -47 1817 118 0 8 chr17 990527 990789 -84447691 - AluSg1 SINE Alu -49 260 1 1341 221 47 9 chr17 990791 991108 -84447372 - L1M4 LINE L1 -362 5822 5494 2525 49 0 0 chr17 991212 991518 -84446962 - AluY SINE Alu -4 307 2 400 326 144 26 chr17 991519 991789 -84446691 - L1M4 LINE L1 -1955 4191 3890 2251 102 0 0 chr17 991817 992112 -84446368 + AluSx SINE Alu 1 295 -17 1898 114 3 23 chr17 992178 992477 -84446003 + AluSx SINE Alu 1 293 -19 2068 104 14 0 chr17 992552 992839 -84445641 + AluSx SINE Alu 11 301 -11 1347 197 71 94 chr17 992863 993471 -84445009 - L1MC5 LINE L1 -30 7931 7338 451 246 143 29 chr17 993474 993649 -84444831 - L1M4 LINE L1 -2364 3782 3588 280 314 133 54 chr17 994077 994519 -84443961 - L2 LINE L2 -10 3303 2827 1923 129 0 10 chr17 995348 995643 -84442837 + AluSx SINE Alu 7 298 -14 181 264 0 38 chr17 995904 995957 -84442523 + L2 LINE L2 3222 3272 0 1264 189 4 15 chr17 996381 996641 -84441839 + AluJo SINE Alu 16 272 -40 395 337 51 10 chr17 996661 996857 -84441623 + L1M4 LINE L1 5189 5392 -754 2244 233 33 75 chr17 996874 997125 -84441355 - L1MEc LINE L1 -2056 4159 3899 1654 115 39 0 chr17 997125 997285 -84441195 - AluSx SINE Alu -19 293 118 300 27 0 0 chr17 997285 997322 -84441158 + (TG)n Simple_repeat Simple_repeat 2 38 0 1654 115 39 0 chr17 997322 997421 -84441059 - AluSx SINE Alu -194 118 24 2244 233 33 75 chr17 997421 997930 -84440550 - L1MEc LINE L1 -2316 3899 3431 1322 161 106 25 chr17 997997 998271 -84440209 + AluJb SINE Alu 1 296 -16 1856 120 0 20 chr17 998271 998570 -84439910 + AluSg SINE Alu 1 294 -16 28 111 0 0 chr17 998576 998657 -84439823 + AT_rich Low_complexity Low_complexity 1 81 0 826 107 0 9 chr17 998657 998769 -84439711 - AluSq/x SINE Alu -179 133 23 1258 202 86 5 chr17 998836 999207 -84439273 - L1MEc LINE L1 -2907 3308 2908 234 91 0 0 chr17 999208 999241 -84439239 + (T)n Simple_repeat Simple_repeat 1 33 0 2009 124 0 13 chr17 1000432 1000730 -84437750 - AluSx SINE Alu -13 299 6 1904 209 54 14 chr17 1000732 1000834 -84437646 - L1MEc LINE L1 -3287 2928 2832 1919 136 0 3 chr17 1000834 1001176 -84437304 - AluSx SINE Alu 0 341 1 1904 209 54 14 chr17 1001176 1001588 -84436892 - L1MEc LINE L1 -3383 2832 2392 1363 177 0 61 chr17 1001589 1001773 -84436707 - AluJb SINE Alu -1 311 117 180 97 0 0 chr17 1001773 1001804 -84436676 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 2027 89 4 4 chr17 1001804 1002075 -84436405 - AluSc SINE Alu -28 281 11 1363 177 0 61 chr17 1002075 1002199 -84436281 - AluJb SINE Alu -193 119 21 834 147 61 25 chr17 1002257 1002420 -84436060 - AluJo SINE Alu -142 170 2 2507 271 46 21 chr17 1002420 1003268 -84435212 - L1MEc LINE L1 -5241 1155 287 565 296 8 46 chr17 1003458 1003698 -84434782 - HAL1 LINE L1 -25 2482 2252 1595 132 26 58 chr17 1003711 1003877 -84434603 - AluJo SINE Alu -11 301 148 2081 80 30 13 chr17 1003877 1004179 -84434301 - AluY SINE Alu -4 307 1 1595 132 26 58 chr17 1004179 1004323 -84434157 - AluJo SINE Alu -164 148 1 1913 132 4 0 chr17 1004401 1004707 -84433773 - AluSx SINE Alu 0 307 1 2237 73 16 7 chr17 1004707 1005009 -84433471 - AluSq SINE Alu -7 306 1 1396 183 20 40 chr17 1005013 1005176 -84433304 - AluJb SINE Alu -10 302 137 387 0 0 0 chr17 1005176 1005219 -84433261 + (TTTTA)n Simple_repeat Simple_repeat 2 44 0 2162 77 3 3 chr17 1005219 1005504 -84432976 - AluSx SINE Alu -27 285 1 1396 183 20 40 chr17 1005504 1005639 -84432841 - AluJb SINE Alu -173 139 9 2134 105 0 10 chr17 1006248 1006552 -84431928 + AluSq SINE Alu 2 302 -11 1752 87 4 16 chr17 1006665 1006918 -84431562 + AluSx SINE Alu 55 304 -8 279 203 101 29 chr17 1006918 1006987 -84431493 + AluSc SINE Alu 132 205 -94 242 281 104 67 chr17 1007101 1007236 -84431244 - MIR3 SINE MIR -9 199 60 343 266 60 54 chr17 1007601 1007785 -84430695 - L1MC4a LINE L1 -1748 6060 5876 822 191 0 0 chr17 1007808 1007934 -84430546 - FLAM_C SINE Alu -16 127 2 1693 168 0 13 chr17 1007960 1008263 -84430217 + AluJb SINE Alu 1 299 -13 1989 112 6 22 chr17 1008314 1008626 -84429854 - AluSx SINE Alu -5 307 1 850 122 0 41 chr17 1008627 1008774 -84429706 - AluSq/x SINE Alu -172 141 1 183 42 0 0 chr17 1009347 1009371 -84429109 + (TG)n Simple_repeat Simple_repeat 2 25 0 1679 178 0 19 chr17 1009439 1009754 -84428726 + AluJo SINE Alu 1 309 -3 1252 191 10 54 chr17 1009818 1010132 -84428348 + AluJb SINE Alu 3 302 0 1530 118 118 19 chr17 1010519 1010790 -84427690 + AluSg SINE Alu 1 298 -12 2084 86 0 20 chr17 1011291 1011594 -84426886 + AluSq SINE Alu 1 297 -16 502 316 62 29 chr17 1012059 1012303 -84426177 + MIR SINE MIR 11 262 0 1235 172 28 16 chr17 1012497 1012747 -84425733 - L1MB3 LINE L1 -7 6176 5924 1384 170 147 8 chr17 1014787 1015052 -84423428 - AluJo SINE Alu 0 302 1 2173 119 0 13 chr17 1015785 1016095 -84422385 + AluSx SINE Alu 1 306 -6 329 0 0 24 chr17 1016095 1016137 -84422343 + (TA)n Simple_repeat Simple_repeat 2 42 0 248 0 0 30 chr17 1016136 1016169 -84422311 + (CA)n Simple_repeat Simple_repeat 2 33 0 * 1710 149 13 30 chr17 1016328 1016629 -84421851 + AluJo SINE Alu 1 296 -16 21 0 0 0 chr17 1016738 1016759 -84421721 + AT_rich Low_complexity Low_complexity 1 21 0 2102 120 0 10 chr17 1018405 1018713 -84419767 + AluSx SINE Alu 1 305 -7 1939 126 0 23 chr17 1020087 1020389 -84418091 + AluSx SINE Alu 2 296 -16 1783 132 16 46 chr17 1024567 1024870 -84413610 + AluSx SINE Alu 1 294 -18 217 267 0 67 chr17 1025397 1025472 -84413008 - MIR SINE MIR -79 129 60 1357 95 11 0 chr17 1026176 1026365 -84412115 - AluSg/x SINE Alu -18 294 104 2108 71 0 14 chr17 1026365 1026646 -84411834 - AluSg SINE Alu -33 277 1 344 93 0 0 chr17 1026652 1026706 -84411774 - Alu SINE Alu -7 294 241 227 351 0 0 chr17 1026713 1026790 -84411690 + L2 LINE L2 3232 3308 -5 1967 85 50 7 chr17 1026940 1027222 -84411258 + AluSx SINE Alu 2 295 -17 327 250 179 18 chr17 1027234 1027600 -84410880 + L2 LINE L2 2765 3191 -122 474 266 112 115 chr17 1029557 1029843 -84408637 + L2 LINE L2 2985 3269 -3 2185 105 3 10 chr17 1029848 1030162 -84408318 - AluSx SINE Alu 0 312 1 1492 174 60 11 chr17 1030162 1030444 -84408036 - AluJb SINE Alu -15 297 2 2141 108 0 13 chr17 1031214 1031520 -84406960 + AluSq SINE Alu 1 302 -11 201 313 30 0 chr17 1031586 1031653 -84406827 + MIR SINE MIR 70 138 -70 2122 80 0 21 chr17 1031793 1032103 -84406377 - AluY SINE Alu 0 304 1 2127 105 0 13 chr17 1032103 1032408 -84406072 - AluSq SINE Alu -12 301 1 2169 90 3 39 chr17 1032991 1033132 -84405348 + AluSx SINE Alu 1 145 -167 2045 81 3 14 chr17 1033132 1033439 -84405041 + AluSc SINE Alu 1 304 0 2169 90 3 39 chr17 1033439 1033606 -84404874 + AluSx SINE Alu 145 299 -13 567 120 0 22 chr17 1033882 1033974 -84404506 + AluS SINE Alu 1 90 -222 1123 112 0 0 chr17 1033974 1034135 -84404345 - AluSg/x SINE Alu -18 294 134 1721 152 3 23 chr17 1034135 1034438 -84404042 - AluSg SINE Alu -13 297 1 307 350 105 35 chr17 1034445 1034645 -84403835 + L2 LINE L2 3099 3312 -1 2201 56 3 30 chr17 1035268 1035573 -84402907 - AluY SINE Alu -14 297 1 181 288 136 15 chr17 1035576 1035642 -84402838 - MER5A DNA MER1_type -115 74 1 2242 96 3 3 chr17 1037101 1037404 -84401076 - AluSp SINE Alu -10 303 1 2240 78 3 13 chr17 1038291 1038597 -84399883 - AluSp SINE Alu -10 303 1 258 258 176 0 chr17 1039497 1039638 -84398842 - MIR SINE MIR -75 187 13 212 214 5 88 chr17 1039977 1040169 -84398311 + CT-rich Low_complexity Low_complexity 3 178 0 230 263 0 59 chr17 1040247 1040399 -84398081 + CT-rich Low_complexity Low_complexity 4 146 0 227 226 11 74 chr17 1040477 1040667 -84397813 + CT-rich Low_complexity Low_complexity 3 180 0 224 195 0 103 chr17 1040832 1041027 -84397453 + CT-rich Low_complexity Low_complexity 3 177 0 985 81 0 29 chr17 1041183 1041319 -84397161 + FLAM_C SINE Alu 1 132 -1 694 289 56 5 chr17 1042797 1042994 -84395486 - MIR SINE MIR -28 234 28 2240 84 0 7 chr17 1044530 1044826 -84393654 - AluY SINE Alu -17 294 1 604 104 208 19 chr17 1044828 1044934 -84393546 - AluSg SINE Alu -179 131 6 2282 98 0 0 chr17 1045176 1045482 -84392998 - AluSg SINE Alu -4 306 1 330 309 81 7 chr17 1045506 1045642 -84392838 - MIR SINE MIR -110 152 7 328 217 29 0 chr17 1046559 1046628 -84391852 + MIR SINE MIR 76 146 -62 324 346 22 15 chr17 1046628 1046764 -84391716 - L2 LINE L2 0 3313 3177 2208 100 0 16 chr17 1047737 1048047 -84390433 - AluSx SINE Alu -6 306 2 1840 109 0 84 chr17 1048059 1048380 -84390100 - AluSg SINE Alu -16 294 1 900 91 0 8 chr17 1048390 1048511 -84389969 - FLAM_C SINE Alu -21 122 3 389 235 198 43 chr17 1048515 1048677 -84389803 - MIR3 SINE MIR -10 198 12 276 344 81 63 chr17 1049933 1050000 -84388480 + L2 LINE L2 2835 2899 -414 1985 108 0 91 chr17 1050000 1050341 -84388139 - AluSg SINE Alu 0 310 1 276 344 81 63 chr17 1050341 1050525 -84387955 + L2 LINE L2 2899 3078 -235 2321 86 0 3 chr17 1050525 1050826 -84387654 - AluSx SINE Alu -12 300 1 276 344 81 63 chr17 1050826 1051018 -84387462 + L2 LINE L2 3078 3287 -26 2393 66 3 0 chr17 1051047 1051352 -84387128 - AluY SINE Alu -5 306 1 186 43 0 0 chr17 1051587 1051610 -84386870 + (TCC)n Simple_repeat Simple_repeat 2 24 0 248 238 24 24 chr17 1055191 1055275 -84383205 + G-rich Low_complexity Low_complexity 3 86 0 328 282 48 19 chr17 1056042 1056145 -84382335 - L1MC4 LINE L1 -478 7564 7459 1732 107 0 8 chr17 1056145 1056388 -84382092 + AluSx SINE Alu 1 241 -71 226 280 16 80 chr17 1056445 1056570 -84381910 - MIR SINE MIR -40 222 106 2268 86 7 0 chr17 1056675 1057071 -84381409 + AluY SINE Alu 1 311 0 2274 99 0 10 chr17 1057470 1057783 -84380697 + AluSg SINE Alu 1 310 0 2192 97 7 7 chr17 1057819 1058129 -84380351 + AluSx SINE Alu 1 310 -2 227 302 52 10 chr17 1058234 1058330 -84380150 - MIR SINE MIR -4 258 159 2403 61 3 0 chr17 1058331 1058624 -84379856 - AluSp SINE Alu -19 294 1 1791 161 3 10 chr17 1058627 1058925 -84379555 - AluJb SINE Alu -13 299 4 900 156 12 24 chr17 1058930 1059097 -84379383 - AluJo/FRAM SINE Alu -1 301 137 1312 115 0 11 chr17 1059100 1059291 -84379189 - AluSp SINE Alu -19 294 106 2071 84 40 17 chr17 1059690 1059987 -84378493 - AluSx SINE Alu -8 304 1 255 333 20 10 chr17 1060000 1060099 -84378381 - MER5A DNA MER1_type -83 106 7 1547 154 110 4 chr17 1060496 1060769 -84377711 - AluSx SINE Alu -10 302 1 866 121 15 23 chr17 1060779 1060911 -84377569 - FLAM_C SINE Alu -2 131 1 2219 63 0 22 chr17 1060914 1061230 -84377250 - AluY SINE Alu 0 311 3 21 36 0 0 chr17 1061234 1061262 -84377218 + AT_rich Low_complexity Low_complexity 1 28 0 204 275 87 72 chr17 1061343 1061387 -84377093 - MIR SINE MIR -177 85 38 942 216 22 57 chr17 1061387 1061614 -84376866 + MER20 DNA MER1_type 1 219 0 204 275 87 72 chr17 1061614 1061638 -84376842 - MIR SINE MIR -224 38 16 2305 77 0 13 chr17 1062089 1062402 -84376078 + AluSx SINE Alu 1 309 -3 23 92 0 0 chr17 1064650 1064715 -84373765 + GC_rich Low_complexity Low_complexity 1 65 0 224 269 44 19 chr17 1066011 1066171 -84372309 + A-rich Low_complexity Low_complexity 4 167 0 555 176 29 0 chr17 1066218 1066320 -84372160 + AluSg/x SINE Alu 187 291 -18 1332 183 32 32 chr17 1066694 1066820 -84371660 + AluJo SINE Alu 1 126 -186 2198 70 10 30 chr17 1066820 1067119 -84371361 - AluSq SINE Alu -20 293 1 1332 183 32 32 chr17 1067119 1067276 -84371204 + AluJo SINE Alu 125 284 -28 38 0 0 0 chr17 1067276 1067314 -84371166 + AT_rich Low_complexity Low_complexity 1 38 0 516 153 82 0 chr17 1068414 1068512 -84369968 + FLAM_A SINE Alu 22 127 -15 4579 141 44 31 chr17 1068512 1069144 -84369336 - Tigger1 DNA MER2_type -194 2224 1576 1483 147 124 15 chr17 1069144 1069409 -84369071 - AluJb SINE Alu -18 294 1 4579 141 44 31 chr17 1069409 1069665 -84368815 - Tigger1 DNA MER2_type -842 1576 1325 338 95 16 79 chr17 1069665 1069728 -84368752 - Tigger1 DNA MER2_type -1035 1383 1325 3573 127 11 21 chr17 1069767 1070383 -84368097 - Tigger1 DNA MER2_type -1012 1406 797 577 91 0 0 chr17 1070387 1070464 -84368016 - AluJo SINE Alu -10 302 226 1050 157 56 6 chr17 1070464 1070642 -84367838 - AluJo SINE Alu -125 187 1 1136 101 22 6 chr17 1070642 1070820 -84367660 - Tigger1 DNA MER2_type -1614 804 624 1556 165 38 70 chr17 1070820 1070961 -84367519 - Tigger1 DNA MER2_type -2060 358 214 2330 87 0 13 chr17 1070961 1071260 -84367220 + AluSc SINE Alu 1 295 -14 1556 165 38 70 chr17 1071260 1071289 -84367191 - Tigger1 DNA MER2_type -2204 214 186 1983 125 0 27 chr17 1071289 1071585 -84366895 + AluSx SINE Alu 1 288 -24 1556 165 38 70 chr17 1071585 1071783 -84366697 - Tigger1 DNA MER2_type -2232 186 1 411 200 0 67 chr17 1071783 1071872 -84366608 + MER58B DNA MER1_type 259 341 0 1652 203 0 20 chr17 1073029 1073335 -84365145 - AluJb SINE Alu -12 300 1 195 42 0 0 chr17 1073342 1073366 -84365114 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2490 82 0 3 chr17 1073413 1073718 -84364762 + AluSq SINE Alu 1 304 -9 250 232 0 18 chr17 1073727 1073783 -84364697 + L1MB7 LINE L1 5559 5613 -508 1913 158 21 0 chr17 1073785 1074076 -84364404 + AluJb SINE Alu 1 297 -15 2263 93 0 13 chr17 1074078 1074379 -84364101 + AluY SINE Alu 1 297 -14 2051 94 0 11 chr17 1075159 1075434 -84363046 - AluSx SINE Alu -40 272 1 2170 99 7 3 chr17 1075726 1076010 -84362470 - AluSq SINE Alu -17 296 12 1561 202 0 38 chr17 1077584 1077901 -84360579 - AluJo SINE Alu -7 305 1 1934 146 14 7 chr17 1077907 1078201 -84360279 - AluSx SINE Alu -16 296 1 612 187 15 8 chr17 1078236 1078370 -84360110 - L1MB3 LINE L1 -1 6182 6048 354 264 0 0 chr17 1078370 1078457 -84360023 + L1MB7 LINE L1 5938 6024 -160 311 213 85 53 chr17 1078464 1078558 -84359922 - L1MB3 LINE L1 -147 6036 5940 275 143 111 0 chr17 1078969 1079032 -84359448 - MIR SINE MIR -102 160 91 217 132 0 0 chr17 1079065 1079103 -84359377 + (T)n Simple_repeat Simple_repeat 1 38 0 518 140 190 10 chr17 1079216 1079316 -84359164 + FLAM_A SINE Alu 1 118 -15 2200 75 14 11 chr17 1079401 1079723 -84358757 - AluSx SINE Alu 0 323 1 542 257 56 76 chr17 1079734 1079983 -84358497 - MIR SINE MIR -4 258 15 333 303 49 16 chr17 1080465 1080587 -84357893 + MIR3 SINE MIR 76 201 -7 2329 68 11 4 chr17 1083937 1084243 -84354237 - AluSg SINE Alu 0 308 1 2060 124 3 7 chr17 1084291 1084581 -84353899 + AluJo SINE Alu 1 289 -23 2251 119 0 3 chr17 1084595 1084897 -84353583 + AluSx SINE Alu 5 305 -7 2116 78 0 119 chr17 1084946 1085290 -84353190 - AluSc SINE Alu -6 303 1 1881 140 14 7 chr17 1085429 1085721 -84352759 + AluSx SINE Alu 1 294 -18 959 98 98 20 chr17 1086337 1086490 -84351990 - AluSg/x SINE Alu -19 291 127 2196 92 7 3 chr17 1086499 1086804 -84351676 - AluY SINE Alu 0 306 1 2257 87 37 7 chr17 1086816 1087114 -84351366 - AluSp SINE Alu -6 307 1 2359 94 0 19 chr17 1087491 1087809 -84350671 - AluSx SINE Alu 0 312 1 2550 43 7 10 chr17 1090067 1090372 -84348108 + AluSp SINE Alu 1 304 -9 2340 88 7 19 chr17 1094514 1094822 -84343658 - AluSq SINE Alu -6 307 4 2413 103 3 0 chr17 1094874 1095184 -84343296 + AluSx SINE Alu 1 311 -1 192 356 33 22 chr17 1095923 1096013 -84342467 + MIR SINE MIR 124 214 -48 283 356 7 34 chr17 1096245 1096391 -84342089 + L3 LINE CR1 1296 1437 -140 2325 89 0 13 chr17 1096738 1097051 -84341429 + AluSx SINE Alu 1 309 -3 604 231 62 59 chr17 1097176 1097477 -84341003 + MLT1C LTR MaLR 5 316 -151 1012 172 22 43 chr17 1097477 1097709 -84340771 + AluJb SINE Alu 86 312 0 744 176 13 13 chr17 1097709 1097862 -84340618 + MLT1C LTR MaLR 306 458 -9 399 21 0 0 chr17 1098156 1098204 -84340276 + (CA)n Simple_repeat Simple_repeat 1 48 0 2473 54 0 16 chr17 1098269 1098583 -84339897 + AluY SINE Alu 1 309 -2 2078 114 3 23 chr17 1099382 1099689 -84338791 - AluSg SINE Alu -9 301 1 202 278 0 28 chr17 1102277 1102349 -84336131 + CT-rich Low_complexity Low_complexity 2 71 0 1878 141 7 23 chr17 1103816 1104121 -84334359 + AluSx SINE Alu 1 300 -12 2294 96 0 13 chr17 1104477 1104780 -84333700 - AluSx SINE Alu -13 299 1 693 163 0 0 chr17 1105378 1105501 -84332979 + FLAM_A SINE Alu 4 126 -7 22 0 0 0 chr17 1105501 1105523 -84332957 + AT_rich Low_complexity Low_complexity 1 22 0 2166 92 0 11 chr17 1105536 1105820 -84332660 + AluSx SINE Alu 1 281 -31 2302 79 7 0 chr17 1105826 1106133 -84332347 + AluY SINE Alu 1 309 0 279 323 76 76 chr17 1156359 1156660 -84281820 - L2 LINE L2 -64 3208 2905 2314 102 0 0 chr17 1156660 1156963 -84281517 + AluSx SINE Alu 1 303 -9 279 323 76 76 chr17 1156963 1157057 -84281423 - L2 LINE L2 -366 2906 2813 2343 97 0 0 chr17 1158209 1158519 -84279961 + AluSx SINE Alu 1 310 -2 335 254 120 14 chr17 1158524 1158666 -84279814 - MIR3 SINE MIR -41 167 11 264 59 0 0 chr17 1159789 1159823 -84278657 + (CA)n Simple_repeat Simple_repeat 2 35 0 370 343 36 36 chr17 1160709 1160957 -84277523 + MIR SINE MIR 1 248 -14 2304 79 3 3 chr17 1163658 1163961 -84274519 - AluSx SINE Alu -9 303 1 1667 160 26 36 chr17 1163961 1164138 -84274342 - AluJb SINE Alu -9 303 129 2106 127 0 3 chr17 1164138 1164429 -84274051 + AluSx SINE Alu 1 290 -22 1667 160 26 36 chr17 1164429 1164557 -84273923 - AluJb SINE Alu -183 129 1 213 217 0 28 chr17 1165770 1165836 -84272644 + C-rich Low_complexity Low_complexity 1 64 0 23 33 0 0 chr17 1166500 1166530 -84271950 + GC_rich Low_complexity Low_complexity 1 30 0 231 236 0 0 chr17 1167427 1167499 -84270981 + CT-rich Low_complexity Low_complexity 3 74 0 437 330 157 22 chr17 1168320 1168587 -84269893 - L2 LINE L2 -6 3307 3005 2449 56 0 0 chr17 1168640 1168942 -84269538 + AluSg SINE Alu 1 302 -8 2166 99 26 0 chr17 1168948 1169250 -84269230 + AluSx SINE Alu 1 310 -2 239 298 96 0 chr17 1169449 1169543 -84268937 - L2 LINE L2 -217 3055 2953 757 140 0 66 chr17 1169608 1169744 -84268736 + FLAM_C SINE Alu 14 140 -3 264 274 36 24 chr17 1169932 1170016 -84268464 - MIR SINE MIR -76 132 48 1728 144 26 49 chr17 1171408 1171713 -84266767 + AluJo SINE Alu 1 298 -14 251 254 17 0 chr17 1172674 1172733 -84265747 - L2 LINE L2 -5 3267 3208 216 288 0 0 chr17 1173085 1173144 -84265336 + L2 LINE L2 3255 3313 0 1382 186 16 52 chr17 1173218 1173358 -84265122 + AluJo SINE Alu 1 144 -168 2374 74 0 16 chr17 1173358 1173667 -84264813 + AluSx SINE Alu 1 304 -8 1382 186 16 52 chr17 1173667 1173833 -84264647 + AluJo SINE Alu 144 296 -16 188 263 50 50 chr17 1173918 1174017 -84264463 + L2 LINE L2 3093 3191 -81 592 205 37 74 chr17 1174646 1174812 -84263668 - LTR39 LTR ERV1 0 783 623 2149 77 40 3 chr17 1174812 1175110 -84263370 - AluY SINE Alu -2 309 1 592 205 37 74 chr17 1175110 1175133 -84263347 - LTR39 LTR ERV1 -160 623 601 1088 174 59 41 chr17 1175261 1175531 -84262949 - LTR39 LTR ERV1 -508 275 1 273 57 0 135 chr17 1176524 1176665 -84261815 + (CCCCCT)n Simple_repeat Simple_repeat 2 123 0 536 110 0 94 chr17 1176679 1176870 -84261610 + (CCCCCT)n Simple_repeat Simple_repeat 2 174 0 216 217 0 33 chr17 1176882 1176942 -84261538 + C-rich Low_complexity Low_complexity 3 60 0 218 281 0 0 chr17 1179262 1179319 -84259161 - MIR SINE MIR -111 97 41 541 327 28 28 chr17 1180004 1180221 -84258259 + MIR SINE MIR 43 259 -3 1571 168 23 52 chr17 1180221 1180530 -84257950 + AluJb SINE Alu 1 300 -12 1687 181 87 0 chr17 1180628 1180938 -84257542 + MER1B DNA MER1_type 1 337 0 467 243 44 29 chr17 1181123 1181259 -84257221 - MIR3 SINE MIR -32 176 39 2287 85 0 0 chr17 1181259 1181553 -84256927 - AluY SINE Alu -16 295 2 2606 43 0 0 chr17 1181565 1181870 -84256610 - AluY SINE Alu -6 305 1 183 309 149 75 chr17 1183031 1183219 -84255261 - L2 LINE L2 -29 3284 3083 335 308 157 0 chr17 1183464 1183623 -84254857 + MIR SINE MIR 17 200 -62 25 0 0 0 chr17 1183787 1183812 -84254668 + GC_rich Low_complexity Low_complexity 1 25 0 1730 160 17 10 chr17 1186211 1186505 -84251975 - AluJb SINE Alu -11 301 6 1624 174 26 16 chr17 1186522 1186826 -84251654 - AluJb SINE Alu -5 307 1 326 245 47 9 chr17 1187360 1187466 -84251014 + Charlie8 DNA MER1_type 91 200 -2217 2156 110 10 0 chr17 1187857 1188157 -84250323 + AluSp SINE Alu 1 303 -10 1208 97 0 0 chr17 1188158 1188312 -84250168 + AluSg/x SINE Alu 135 288 -24 312 275 101 9 chr17 1188321 1188430 -84250050 + MER5A DNA MER1_type 71 189 0 2107 134 0 0 chr17 1188605 1188910 -84249570 - AluSx SINE Alu -7 305 1 2038 143 0 3 chr17 1188985 1189292 -84249188 + AluJo SINE Alu 1 306 -6 1228 140 0 0 chr17 1189293 1189471 -84249009 + AluSg/x SINE Alu 124 301 -9 207 130 74 0 chr17 1189472 1189526 -84248954 + (TA)n Simple_repeat Simple_repeat 1 58 0 1232 162 5 5 chr17 1189580 1189796 -84248684 - AluSg/x SINE Alu -12 300 85 1213 161 71 36 chr17 1189797 1190077 -84248403 - AluJo SINE Alu -22 290 1 1691 149 0 70 chr17 1190088 1190404 -84248076 - AluJb SINE Alu -18 294 1 21 0 0 0 chr17 1190810 1190831 -84247649 + GC_rich Low_complexity Low_complexity 1 21 0 251 294 69 10 chr17 1193042 1193144 -84245336 + MIR SINE MIR 112 219 -43 26 64 0 0 chr17 1193278 1193325 -84245155 + AT_rich Low_complexity Low_complexity 1 47 0 479 111 49 0 chr17 1193358 1193439 -84245041 - AluY SINE Alu -27 284 200 23 0 0 0 chr17 1193663 1193686 -84244794 + GC_rich Low_complexity Low_complexity 1 23 0 31 76 0 0 chr17 1195015 1195081 -84243399 + GC_rich Low_complexity Low_complexity 1 66 0 28 48 0 0 chr17 1195865 1195907 -84242573 + GC_rich Low_complexity Low_complexity 1 42 0 200 292 0 31 chr17 1196627 1196723 -84241757 + C-rich Low_complexity Low_complexity 3 95 0 27 62 0 0 chr17 1197041 1197089 -84241391 + GC_rich Low_complexity Low_complexity 1 48 0 1873 181 0 3 chr17 1199809 1200113 -84238367 + AluJb SINE Alu 6 308 -4 23 0 0 0 chr17 1200256 1200279 -84238201 + AT_rich Low_complexity Low_complexity 1 23 0 212 109 0 22 chr17 1200296 1200342 -84238138 + (TAGG)n Simple_repeat Simple_repeat 4 48 0 2123 100 13 3 chr17 1200362 1200661 -84237819 - AluSq SINE Alu -11 302 1 517 143 22 22 chr17 1200661 1200752 -84237728 - AluSg/x SINE Alu -7 302 212 454 346 64 40 chr17 1201215 1201486 -84236994 + L1MC4a LINE L1 5656 5838 -283 2576 39 3 3 chr17 1201487 1201797 -84236683 + AluYb8 SINE Alu 1 310 -8 429 218 58 11 chr17 1201811 1201985 -84236495 + L1MB7 LINE L1 4378 4559 -1587 315 254 10 62 chr17 1202043 1202195 -84236285 + L1MB7 LINE L1 4976 5093 -1053 1801 78 12 4 chr17 1202277 1202522 -84235958 + AluSg SINE Alu 44 290 -20 537 161 102 8 chr17 1202742 1202860 -84235620 - MER5A DNA MER1_type -33 156 28 283 182 0 0 chr17 1202887 1202900 -84235580 + MER3 DNA MER1_type 36 48 -161 674 210 114 0 chr17 1202900 1203067 -84235413 - MER3 DNA MER1_type -1 208 23 266 272 201 65 chr17 1203130 1203303 -84235177 + L3 LINE CR1 1188 1336 -241 1718 169 10 14 chr17 1203303 1203598 -84234882 - AluJo SINE Alu -18 294 1 266 272 201 65 chr17 1203598 1203762 -84234718 + L3 LINE CR1 1336 1571 -6 574 189 66 41 chr17 1203886 1204008 -84234472 - FLAM_A SINE Alu -6 136 12 588 166 134 16 chr17 1204031 1204218 -84234262 + L1MB7 LINE L1 5083 5291 -855 859 104 17 0 chr17 1204218 1204333 -84234147 + FLAM_C SINE Alu 1 117 -16 201 39 0 0 chr17 1204376 1204402 -84234078 + (TCTA)n Simple_repeat Simple_repeat 4 29 0 3889 150 36 31 chr17 1204402 1204457 -84234023 + L1MB7 LINE L1 5275 5328 -856 2444 64 0 13 chr17 1204457 1204768 -84233712 + AluSp SINE Alu 1 307 -6 3889 150 36 31 chr17 1204768 1205617 -84232863 + L1MB7 LINE L1 5328 6184 0 387 163 12 25 chr17 1205710 1205790 -84232690 - L1MA10 LINE L1 0 6334 6256 1193 202 4 16 chr17 1205798 1205905 -84232575 - AluJb SINE Alu -67 245 138 2248 92 0 25 chr17 1205905 1206222 -84232258 - AluSq SINE Alu -4 309 1 1193 202 4 16 chr17 1206222 1206362 -84232118 - AluJb SINE Alu -174 138 1 628 301 8 25 chr17 1206432 1206668 -84231812 - L1MEd LINE L1 -5424 695 464 396 313 57 83 chr17 1206689 1206957 -84231523 - L1MEd LINE L1 -5776 343 85 1510 147 41 57 chr17 1206957 1207271 -84231209 - AluSx SINE Alu -3 309 1 396 313 57 83 chr17 1207271 1207353 -84231127 - L1MEd LINE L1 -6034 85 2 253 108 0 0 chr17 1207392 1207429 -84231051 + Alu SINE Alu 5 41 -261 577 118 11 0 chr17 1207429 1207522 -84230958 + AluSg/x SINE Alu 215 308 -4 1613 155 13 79 chr17 1208404 1208721 -84229759 - AluSx SINE Alu -16 296 1 335 226 9 70 chr17 1208749 1208864 -84229616 - MIR SINE MIR -50 212 105 2180 93 0 0 chr17 1208976 1209255 -84229225 + AluSx SINE Alu 11 289 -23 743 203 0 0 chr17 1209314 1209437 -84229043 + FLAM_A SINE Alu 4 126 -7 3687 141 32 71 chr17 1209531 1209766 -84228714 + L1MB3 LINE L1 5374 5617 -566 1840 131 11 3 chr17 1209766 1210075 -84228405 + AluJb SINE Alu 1 311 0 3687 141 32 71 chr17 1210075 1210432 -84228048 + L1MB3 LINE L1 5617 5986 -197 1942 159 0 0 chr17 1210432 1210728 -84227752 + AluSx SINE Alu 1 296 -16 3687 141 32 71 chr17 1210728 1210923 -84227557 + L1MB3 LINE L1 5986 6131 -52 2302 101 0 0 chr17 1210923 1211230 -84227250 + AluSx SINE Alu 1 307 -5 3687 141 32 71 chr17 1211230 1211282 -84227198 + L1MB3 LINE L1 6131 6183 0 1950 155 9 40 chr17 1211878 1212226 -84226254 + MER1B DNA MER1_type 1 337 0 3272 202 67 23 chr17 1214250 1214938 -84223542 + L1ME1 LINE L1 5191 5931 -235 1131 90 229 5 chr17 1214938 1215126 -84223354 - MER30 DNA MER1_type 0 230 1 3272 202 67 23 chr17 1215126 1215352 -84223128 + L1ME1 LINE L1 5931 6146 -20 1567 172 46 4 chr17 1216622 1216883 -84221597 + AluJb SINE Alu 23 294 -18 2162 107 0 30 chr17 1216903 1217202 -84221278 - AluSx SINE Alu -15 297 8 25 0 0 0 chr17 1217886 1217911 -84220569 + AT_rich Low_complexity Low_complexity 1 25 0 2273 108 3 13 chr17 1217955 1218270 -84220210 + AluSq SINE Alu 1 312 -1 1955 156 7 3 chr17 1218491 1218792 -84219688 - AluJb SINE Alu -1 311 10 1283 164 5 0 chr17 1220483 1220684 -84217796 + AluJo SINE Alu 1 202 -110 2926 208 45 46 chr17 1220713 1220986 -84217494 + L1ME2 LINE L1 5152 5424 -740 2101 120 7 29 chr17 1220986 1221294 -84217186 + AluSx SINE Alu 1 301 -11 2926 208 45 46 chr17 1221294 1222024 -84216456 + L1ME2 LINE L1 5424 6148 -16 672 159 24 0 chr17 1222209 1222335 -84216145 + AluJb SINE Alu 2 130 -182 713 276 150 46 chr17 1222347 1222499 -84215981 - L1ME4a LINE L1 -6 6115 5980 234 0 0 0 chr17 1222499 1222525 -84215955 + (CA)n Simple_repeat Simple_repeat 2 27 0 713 276 150 46 chr17 1222525 1222579 -84215901 - L1ME4a LINE L1 -141 5980 5933 1832 190 3 0 chr17 1222579 1222889 -84215591 - AluJb SINE Alu -1 311 1 713 276 150 46 chr17 1222889 1223120 -84215360 - L1ME4a LINE L1 -188 5933 5631 1651 244 113 43 chr17 1223695 1224396 -84214084 + L2 LINE L2 2305 3067 -246 188 319 0 0 chr17 1224449 1224496 -84213984 - L2 LINE L2 -16 3256 3210 635 164 9 9 chr17 1224556 1224672 -84213808 - AluJ SINE Alu -16 296 181 633 91 20 20 chr17 1224675 1224774 -84213706 - AluSq SINE Alu -93 220 122 860 91 80 148 chr17 1224774 1224836 -84213644 - AluJ SINE Alu -137 175 110 2258 89 4 0 chr17 1224836 1225150 -84213330 + AluSg SINE Alu 1 315 0 860 91 80 148 chr17 1225150 1225262 -84213218 - AluJ SINE Alu -202 110 12 182 272 35 70 chr17 1225263 1225377 -84213103 - MIR SINE MIR -60 148 39 2090 114 37 23 chr17 1225405 1225704 -84212776 + AluSx SINE Alu 7 309 -3 1509 208 27 3 chr17 1225714 1226012 -84212468 + AluJo SINE Alu 1 305 -7 331 329 118 54 chr17 1226392 1226705 -84211775 - L1MEd LINE L1 -4922 1197 865 2176 105 3 25 chr17 1226724 1227038 -84211442 - AluSx SINE Alu -5 307 1 1641 215 0 3 chr17 1227122 1227415 -84211065 + AluJb SINE Alu 1 292 -20 2032 134 3 7 chr17 1227643 1227950 -84210530 - AluSx SINE Alu -6 306 1 1749 146 0 11 chr17 1227951 1228226 -84210254 - AluJo SINE Alu -6 306 35 586 138 107 16 chr17 1228277 1228436 -84210044 + MER46A DNA MER2_type 5 227 -9 474 218 9 36 chr17 1228814 1228924 -84209556 + MLT1D LTR MaLR 1 107 -398 2303 114 0 0 chr17 1228926 1229225 -84209255 - AluSx SINE Alu -13 299 1 1234 112 0 51 chr17 1229232 1229428 -84209052 - AluSg/x SINE Alu 0 312 127 2227 105 3 20 chr17 1229445 1229741 -84208739 - AluSq SINE Alu -18 295 5 1691 146 4 0 chr17 1229809 1230056 -84208424 - AluSx SINE Alu -21 291 44 612 271 38 55 chr17 1230104 1230396 -84208084 + L1M4 LINE L1 4076 4362 -1784 1814 165 28 3 chr17 1230401 1230692 -84207788 + AluJb SINE Alu 2 299 -13 1864 184 0 0 chr17 1230748 1231047 -84207433 + AluJo SINE Alu 1 299 -13 661 224 0 8 chr17 1231197 1231331 -84207149 - FLAM_A SINE Alu 0 133 1 2228 89 6 25 chr17 1231336 1231651 -84206829 - AluY SINE Alu -2 309 1 384 243 28 19 chr17 1231655 1231762 -84206718 - MIR SINE MIR -61 147 40 985 252 20 20 chr17 1233587 1233837 -84204643 - MIR SINE MIR -1 261 12 297 89 0 0 chr17 1235846 1235891 -84202589 + (CA)n Simple_repeat Simple_repeat 1 45 0 195 100 0 0 chr17 1235975 1236005 -84202475 + (GGGA)n Simple_repeat Simple_repeat 2 31 0 2138 130 10 0 chr17 1240618 1240925 -84197555 + AluSx SINE Alu 1 310 -2 2440 67 0 38 chr17 1242381 1242696 -84195784 - AluY SINE Alu -8 303 1 1981 89 4 8 chr17 1242698 1242957 -84195523 - AluSx SINE Alu -11 301 44 431 287 13 57 chr17 1243469 1243626 -84194854 + MIR SINE MIR 2 151 -111 2073 144 7 0 chr17 1243628 1243933 -84194547 + AluSx SINE Alu 1 307 -5 1052 174 14 55 chr17 1243933 1244152 -84194328 + AluJb SINE Alu 88 297 -15 191 317 17 0 chr17 1244156 1244216 -84194264 + MIR SINE MIR 190 250 -12 327 217 0 29 chr17 1244417 1244486 -84193994 - AluJ SINE Alu -39 263 197 737 154 46 23 chr17 1244491 1244621 -84193859 - AluJ SINE Alu -171 141 9 1926 139 42 3 chr17 1244965 1245253 -84193227 - AluSx SINE Alu -13 299 1 621 167 7 65 chr17 1245260 1245398 -84193082 - FLAM_C SINE Alu -12 131 2 239 202 85 53 chr17 1246177 1246271 -84192209 - L2 LINE L2 -3 3310 3214 1169 200 90 48 chr17 1246775 1246927 -84191553 - AluJo SINE Alu 0 302 158 2268 91 0 17 chr17 1246927 1247223 -84191257 - AluSx SINE Alu -21 291 1 1169 200 90 48 chr17 1247223 1247360 -84191120 - AluJo SINE Alu -144 158 1 187 147 44 103 chr17 1247411 1247471 -84191009 - L2 LINE L2 -9 3304 3247 252 0 0 0 chr17 1247471 1247499 -84190981 + (CAAGA)n Simple_repeat Simple_repeat 5 32 0 209 279 192 0 chr17 1247699 1247803 -84190677 - L3 LINE CR1 -22 1555 1432 1754 158 65 3 chr17 1247859 1248150 -84190330 - AluJb SINE Alu -3 309 1 509 258 151 82 chr17 1248228 1248694 -84189786 - L3 LINE CR1 -136 1441 932 1632 183 23 42 chr17 1248694 1249000 -84189480 - AluJb SINE Alu -12 300 1 509 258 151 82 chr17 1249000 1249071 -84189409 - L3 LINE CR1 -645 932 867 320 333 46 20 chr17 1249186 1249339 -84189141 - L3 LINE CR1 -720 857 701 2317 103 7 0 chr17 1249344 1249645 -84188835 - AluSq SINE Alu -10 303 1 219 254 0 17 chr17 1250526 1250585 -84187895 + MER5A DNA MER1_type 28 85 -104 1762 172 0 17 chr17 1250585 1250744 -84187736 - AluSx SINE Alu -20 292 139 1957 176 3 0 chr17 1250744 1251051 -84187429 - AluSx SINE Alu -4 308 1 1762 172 0 17 chr17 1251051 1251188 -84187292 - AluSx SINE Alu -173 139 1 1425 174 121 11 chr17 1251297 1251561 -84186919 - AluJb SINE Alu -19 293 1 649 150 0 0 chr17 1251565 1251665 -84186815 - AluJ/FLAM SINE Alu -211 101 2 2018 143 0 17 chr17 1251823 1252116 -84186364 - AluJo SINE Alu -24 288 1 640 283 59 0 chr17 1252381 1252568 -84185912 - MIR SINE MIR -4 258 61 2987 165 34 36 chr17 1252905 1253075 -84185405 - L1MA7 LINE L1 0 6291 6122 1790 155 3 48 chr17 1253075 1253384 -84185096 - AluJb SINE Alu -17 295 1 2987 165 34 36 chr17 1253384 1253881 -84184599 - L1MA7 LINE L1 -169 6122 5625 2454 80 0 0 chr17 1254665 1254964 -84183516 - AluY SINE Alu -12 299 1 1002 152 0 0 chr17 1254964 1255109 -84183371 - AluSq/x SINE Alu -168 145 1 238 294 327 20 chr17 1255420 1255573 -84182907 - MIR SINE MIR -62 200 1 826 178 20 13 chr17 1255639 1255791 -84182689 - AluJb SINE Alu -19 293 141 181 376 47 0 chr17 1256433 1256518 -84181962 + L3 LINE CR1 1485 1573 -4 666 197 0 0 chr17 1263638 1263785 -84174695 + (TG)n Simple_repeat Simple_repeat 1 147 0 369 0 0 0 chr17 1264045 1264086 -84174394 + (CA)n Simple_repeat Simple_repeat 2 42 0 205 250 0 0 chr17 1265053 1265097 -84173383 + G-rich Low_complexity Low_complexity 3 46 0 195 42 0 0 chr17 1266762 1266786 -84171694 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1435 143 0 5 chr17 1266791 1267014 -84171466 + AluJb SINE Alu 89 310 -2 256 244 25 50 chr17 1267200 1267319 -84171161 + MER113 DNA MER1_type? 5 120 -401 221 222 19 0 chr17 1270277 1270331 -84168149 + MIR SINE MIR 196 250 -12 2264 100 0 0 chr17 1270458 1270773 -84167707 - AluSx SINE Alu 0 316 2 216 0 0 0 chr17 1270777 1270801 -84167679 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2501 80 0 0 chr17 1270819 1271120 -84167360 + AluSg SINE Alu 1 301 -9 365 61 0 0 chr17 1271138 1271187 -84167293 + AluSq/x SINE Alu 87 135 -168 2076 129 0 14 chr17 1271187 1271481 -84166999 + AluSq SINE Alu 1 290 -23 1052 143 0 0 chr17 1271485 1271632 -84166848 - FRAM SINE Alu -30 146 1 243 321 21 57 chr17 1274765 1274958 -84163522 - L2 LINE L2 -213 3059 2874 771 181 94 7 chr17 1275072 1275221 -84163259 - FAM SINE Alu -13 162 1 354 211 26 0 chr17 1275221 1275297 -84163183 - MIR SINE MIR -112 150 73 194 357 29 14 chr17 1275304 1275444 -84163036 - L2 LINE L2 -452 2862 2721 232 315 110 0 chr17 1275506 1275579 -84162901 + MER91C DNA MER1_type 30 110 -30 2151 121 28 0 chr17 1275771 1276061 -84162419 - AluSq SINE Alu -15 298 1 2330 102 0 0 chr17 1276360 1276653 -84161827 - AluSx SINE Alu -19 293 1 1722 101 93 12 chr17 1276775 1277022 -84161458 + AluSc SINE Alu 34 300 -9 2341 89 0 0 chr17 1277182 1277513 -84160967 + AluSx SINE Alu 1 331 0 2104 141 3 0 chr17 1277532 1277837 -84160643 + AluSx SINE Alu 7 312 0 729 252 19 27 chr17 1277911 1278016 -84160464 - MIR SINE MIR -12 250 146 2474 88 0 3 chr17 1278016 1278324 -84160156 - AluSg SINE Alu -3 307 1 729 252 19 27 chr17 1278324 1278435 -84160045 - MIR SINE MIR -116 146 40 985 252 20 20 chr17 1280259 1280509 -84157971 - MIR SINE MIR -1 261 12 315 85 0 0 chr17 1282518 1282565 -84155915 + (CA)n Simple_repeat Simple_repeat 1 47 0 195 100 0 0 chr17 1282649 1282679 -84155801 + (GGGA)n Simple_repeat Simple_repeat 2 31 0 2211 133 3 0 chr17 1287291 1287600 -84150880 + AluSx SINE Alu 1 310 -2 2440 67 0 38 chr17 1289056 1289371 -84149109 - AluY SINE Alu -8 303 1 1981 89 4 8 chr17 1289373 1289632 -84148848 - AluSx SINE Alu -11 301 44 431 287 13 57 chr17 1290144 1290301 -84148179 + MIR SINE MIR 2 151 -111 2073 144 7 0 chr17 1290303 1290608 -84147872 + AluSx SINE Alu 1 307 -5 1052 174 14 55 chr17 1290608 1290827 -84147653 + AluJb SINE Alu 88 297 -15 191 317 17 0 chr17 1290831 1290891 -84147589 + MIR SINE MIR 190 250 -12 327 217 0 29 chr17 1291092 1291161 -84147319 - AluJ SINE Alu -39 263 197 743 155 47 16 chr17 1291166 1291295 -84147185 - AluJ SINE Alu -171 141 9 1926 139 42 3 chr17 1291639 1291927 -84146553 - AluSx SINE Alu -13 299 1 621 167 7 65 chr17 1291934 1292072 -84146408 - FLAM_C SINE Alu -12 131 2 239 202 85 53 chr17 1292851 1292945 -84145535 - L2 LINE L2 -3 3310 3214 1169 200 90 48 chr17 1293449 1293601 -84144879 - AluJo SINE Alu 0 302 158 2268 91 0 17 chr17 1293601 1293897 -84144583 - AluSx SINE Alu -21 291 1 1169 200 90 48 chr17 1293897 1294034 -84144446 - AluJo SINE Alu -144 158 1 187 147 44 103 chr17 1294085 1294145 -84144335 - L2 LINE L2 -9 3304 3247 252 0 0 0 chr17 1294145 1294173 -84144307 + (CAAGA)n Simple_repeat Simple_repeat 5 32 0 209 279 192 0 chr17 1294373 1294477 -84144003 - L3 LINE CR1 -22 1555 1432 1754 158 65 3 chr17 1294533 1294824 -84143656 - AluJb SINE Alu -3 309 1 513 255 151 82 chr17 1294902 1295368 -84143112 - L3 LINE CR1 -136 1441 932 1632 183 23 42 chr17 1295368 1295674 -84142806 - AluJb SINE Alu -12 300 1 513 255 151 82 chr17 1295674 1295745 -84142735 - L3 LINE CR1 -645 932 867 320 333 46 20 chr17 1295860 1296013 -84142467 - L3 LINE CR1 -720 857 701 2317 103 7 0 chr17 1296018 1296319 -84142161 - AluSq SINE Alu -10 303 1 219 254 0 17 chr17 1297200 1297259 -84141221 + MER5A DNA MER1_type 28 85 -104 1762 172 0 17 chr17 1297259 1297418 -84141062 - AluSx SINE Alu -20 292 139 1957 176 3 0 chr17 1297418 1297725 -84140755 - AluSx SINE Alu -4 308 1 1762 172 0 17 chr17 1297725 1297862 -84140618 - AluSx SINE Alu -173 139 1 1425 174 121 11 chr17 1297971 1298235 -84140245 - AluJb SINE Alu -19 293 1 649 150 0 0 chr17 1298239 1298339 -84140141 - AluJ/FLAM SINE Alu -211 101 2 2018 143 0 17 chr17 1298497 1298790 -84139690 - AluJo SINE Alu -24 288 1 640 283 59 0 chr17 1299056 1299243 -84139237 - MIR SINE MIR -4 258 61 2987 165 34 36 chr17 1299580 1299750 -84138730 - L1MA7 LINE L1 0 6291 6122 1759 158 3 52 chr17 1299750 1300060 -84138420 - AluJb SINE Alu -17 295 1 2987 165 34 36 chr17 1300060 1300557 -84137923 - L1MA7 LINE L1 -169 6122 5625 2454 80 0 0 chr17 1301341 1301640 -84136840 - AluY SINE Alu -12 299 1 1002 152 0 0 chr17 1301640 1301785 -84136695 - AluSq/x SINE Alu -167 145 1 238 294 327 20 chr17 1302095 1302248 -84136232 - MIR SINE MIR -62 200 1 1947 146 3 33 chr17 1302314 1302616 -84135864 - AluJb SINE Alu -19 293 1 2315 85 11 0 chr17 1302653 1302961 -84135519 + AluSq SINE Alu 1 311 0 1703 128 3 104 chr17 1304215 1304543 -84133937 - AluYa5 SINE Alu -14 297 3 192 40 0 0 chr17 1305453 1305478 -84133002 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 2027 135 0 44 chr17 1305725 1306043 -84132437 + AluSx SINE Alu 2 305 -7 1773 152 0 14 chr17 1306048 1306325 -84132155 + AluSx SINE Alu 1 273 -39 336 226 39 10 chr17 1306329 1306431 -84132049 - MIR SINE MIR -48 214 110 2182 126 0 0 chr17 1306660 1306953 -84131527 - AluSx SINE Alu -19 293 1 2101 133 33 0 chr17 1307199 1307500 -84130980 + AluSx SINE Alu 1 311 -1 696 255 115 36 chr17 1308487 1308765 -84129715 - L2 LINE L2 -8 3305 3006 1937 123 37 0 chr17 1308824 1309093 -84129387 - AluJo SINE Alu -33 279 1 2455 55 0 14 chr17 1309612 1309957 -84128523 + AluY SINE Alu 1 341 0 2198 139 0 0 chr17 1310141 1310443 -84128037 - AluJb SINE Alu -10 302 1 1554 157 16 72 chr17 1310443 1310761 -84127719 - AluJb SINE Alu -12 300 1 2344 93 0 7 chr17 1311371 1311671 -84126809 + AluSx SINE Alu 1 298 -14 25 0 0 0 chr17 1311772 1311797 -84126683 + AT_rich Low_complexity Low_complexity 1 25 0 2053 96 8 0 chr17 1312032 1312292 -84126188 + AluSq SINE Alu 1 262 -51 917 26 17 0 chr17 1312292 1312407 -84126073 + (TAAAA)n Simple_repeat Simple_repeat 2 118 0 355 290 22 0 chr17 1312874 1313012 -84125468 + L1ME LINE L1 4771 4911 -1235 1384 192 73 8 chr17 1313146 1313407 -84125073 - AluJo SINE Alu -34 278 1 709 199 18 60 chr17 1313409 1313464 -84125016 + L1ME LINE L1 5087 5143 -1021 1670 181 3 29 chr17 1313464 1313779 -84124701 - AluJo SINE Alu -5 307 1 709 199 18 60 chr17 1313779 1313842 -84124638 + L1ME LINE L1 5143 5207 -957 2198 85 0 75 chr17 1313842 1314161 -84124319 + AluSx SINE Alu 1 295 -17 709 199 18 60 chr17 1314161 1314417 -84124063 + L1ME LINE L1 5207 5442 -722 1023 128 0 0 chr17 1314497 1314638 -84123842 - AluJb SINE Alu -14 298 158 1340 237 101 22 chr17 1314654 1315160 -84123320 + L1ME2 LINE L1 4084 4629 -1517 506 233 24 99 chr17 1315162 1315361 -84123119 + L1ME2 LINE L1 4796 5008 -1138 1881 175 14 0 chr17 1315361 1315653 -84122827 + AluJb SINE Alu 1 296 -16 2207 115 0 3 chr17 1315660 1315948 -84122532 + AluSx SINE Alu 5 291 -21 506 233 24 99 chr17 1315948 1315993 -84122487 + L1ME2 LINE L1 5014 5029 -1117 1290 186 90 21 chr17 1315999 1316289 -84122191 - AluJb SINE Alu -2 310 1 1991 114 30 30 chr17 1316298 1316458 -84122022 - AluSx SINE Alu -14 298 136 2400 94 0 0 chr17 1316458 1316755 -84121725 - AluY SINE Alu -14 297 1 1991 114 30 30 chr17 1316755 1316892 -84121588 - AluSx SINE Alu -175 137 1 2051 127 0 44 chr17 1316897 1317065 -84121415 - AluSx SINE Alu -11 301 152 2357 81 0 3 chr17 1317065 1317360 -84121120 - AluY SINE Alu -17 294 1 2051 127 0 44 chr17 1317360 1317506 -84120974 - AluSx SINE Alu -160 152 1 738 209 177 50 chr17 1317571 1317844 -84120636 + L1ME2 LINE L1 5107 5344 -820 1595 188 31 10 chr17 1317844 1318132 -84120348 + AluJo SINE Alu 1 294 -18 738 209 177 50 chr17 1318132 1318291 -84120189 + L1ME2 LINE L1 5344 5586 -578 1126 144 51 0 chr17 1318297 1318492 -84119988 + MER30 DNA MER1_type 26 230 0 1660 196 50 30 chr17 1318502 1318900 -84119580 + L1ME2 LINE L1 5587 5992 -172 335 274 0 32 chr17 1318914 1319009 -84119471 - L1MC4 LINE L1 -1334 6708 6617 936 151 81 29 chr17 1319022 1319194 -84119286 - AluJb SINE Alu -47 265 85 189 0 0 0 chr17 1319194 1319215 -84119265 + (TTTTC)n Simple_repeat Simple_repeat 2 22 0 1910 121 4 4 chr17 1319220 1319477 -84119003 - AluSx SINE Alu -37 275 19 2527 209 43 34 chr17 1322869 1323031 -84115449 + L1M4 LINE L1 4498 4657 -1489 2129 145 0 0 chr17 1323031 1323335 -84115145 + AluSx SINE Alu 1 304 -8 2527 209 43 34 chr17 1323335 1323807 -84114673 + L1M4 LINE L1 4657 5141 -1005 1962 139 34 0 chr17 1323807 1324102 -84114378 + AluSx SINE Alu 1 305 -7 2527 209 43 34 chr17 1324102 1324140 -84114340 + L1M4 LINE L1 5141 5177 -969 563 193 0 35 chr17 1324140 1324254 -84114226 + AluJb SINE Alu 11 120 -192 408 181 0 0 chr17 1324254 1324337 -84114143 + (CA)n Simple_repeat Simple_repeat 1 83 0 1232 150 0 0 chr17 1324359 1324539 -84113941 + AluJb SINE Alu 132 311 -1 1231 120 89 4 chr17 1324539 1324764 -84113716 + L1MB4 LINE L1 5904 6147 -33 330 22 0 0 chr17 1325648 1325694 -84112786 + L1MB3 LINE L1 6138 6183 0 504 279 8 0 chr17 1325695 1325817 -84112663 - MER3 DNA MER1_type -81 128 6 1812 95 26 0 chr17 1325975 1326273 -84112207 + AluSx SINE Alu 63 366 0 1406 181 102 11 chr17 1326438 1326703 -84111777 + AluJb SINE Alu 1 289 -23 282 333 42 42 chr17 1326712 1326884 -84111596 + L1M4 LINE L1 3852 4026 -2120 2269 124 0 0 chr17 1326884 1327190 -84111290 + AluSx SINE Alu 1 306 -6 282 333 42 42 chr17 1327190 1327278 -84111202 + L1M4 LINE L1 4025 4112 -2034 2683 40 0 3 chr17 1327346 1327650 -84110830 + AluYb8 SINE Alu 5 307 -11 465 213 69 23 chr17 1327664 1327838 -84110642 + L1M4 LINE L1 4378 4559 -1587 1893 74 12 4 chr17 1328130 1328373 -84110107 + AluSg SINE Alu 44 288 -22 304 206 32 90 chr17 1328491 1328646 -84109834 - L1MC5 LINE L1 0 7961 7816 2162 107 0 20 chr17 1328661 1328959 -84109521 - AluSg SINE Alu -18 292 1 2044 125 0 38 chr17 1329138 1329451 -84109029 + AluSx SINE Alu 1 301 -11 517 192 0 0 chr17 1329452 1329530 -84108950 - AluJ/FLAM SINE Alu -232 80 3 560 252 19 44 chr17 1329544 1329703 -84108777 + L2 LINE L2 3156 3310 -3 1118 170 58 0 chr17 1330157 1330345 -84108135 - AluJb SINE Alu -17 295 97 1982 125 4 0 chr17 1330345 1330617 -84107863 + AluSx SINE Alu 24 296 -16 258 260 78 0 chr17 1330818 1330895 -84107585 + MLT1J LTR MaLR 5 87 -424 869 205 0 6 chr17 1330909 1331065 -84107415 - FRAM SINE Alu -25 151 1 456 269 156 48 chr17 1331065 1331418 -84107062 + MLT1J LTR MaLR 75 465 -46 309 300 133 40 chr17 1331445 1331524 -84106956 + MIR SINE MIR 59 129 -133 2007 105 14 14 chr17 1331524 1331809 -84106671 + AluSg SINE Alu 26 310 0 309 300 133 40 chr17 1331809 1331879 -84106601 + MIR SINE MIR 129 222 -40 2309 120 0 0 chr17 1332232 1332540 -84105940 - AluSx SINE Alu -4 308 1 1569 156 40 13 chr17 1332546 1332848 -84105632 - L1MA7 LINE L1 0 6291 5982 762 181 12 6 chr17 1332894 1333054 -84105426 + MER3 DNA MER1_type 5 165 -44 1681 184 25 4 chr17 1333065 1333343 -84105137 - AluJb SINE Alu -28 284 1 426 20 0 0 chr17 1333343 1333357 -84105123 + (TG)n Simple_repeat Simple_repeat 1 65 0 426 20 0 0 chr17 1333357 1333408 -84105072 + (TG)n Simple_repeat Simple_repeat 2 52 0 1961 101 75 0 chr17 1333435 1333703 -84104777 - AluSx SINE Alu -24 288 1 1896 135 3 30 chr17 1334237 1334534 -84103946 + AluJb SINE Alu 1 289 -23 2216 108 7 0 chr17 1336779 1337075 -84101405 - AluSx SINE Alu -9 303 6 2202 107 7 0 chr17 1337094 1337384 -84101096 - AluSx SINE Alu -20 292 1 21 36 0 0 chr17 1337659 1337687 -84100793 + AT_rich Low_complexity Low_complexity 1 28 0 213 39 0 0 chr17 1339323 1339349 -84099131 + (CAAT)n Simple_repeat Simple_repeat 1 26 0 685 188 9 0 chr17 1339482 1339594 -84098886 - MER81 DNA DNA -1 113 1 234 0 0 0 chr17 1339781 1339807 -84098673 + (T)n Simple_repeat Simple_repeat 1 26 0 820 167 0 0 chr17 1340052 1340184 -84098296 + FLAM_C SINE Alu 1 132 -1 2255 107 13 0 chr17 1341185 1341485 -84096995 - AluSq SINE Alu -9 304 1 2294 88 10 0 chr17 1341497 1341791 -84096689 - AluSx SINE Alu -15 297 1 811 221 80 6 chr17 1341848 1342011 -84096469 + FAM SINE Alu 1 175 0 426 272 47 67 chr17 1342036 1342290 -84096190 - L1ME LINE L1 -370 5751 5503 2635 31 0 0 chr17 1342331 1342625 -84095855 - AluY SINE Alu -17 294 1 1453 179 4 12 chr17 1343084 1343335 -84095145 - AluJb SINE Alu -63 249 1 2335 111 3 3 chr17 1343966 1344273 -84094207 + AluSq SINE Alu 1 307 -6 753 122 16 0 chr17 1344273 1344396 -84094084 - L1PB1 LINE L1 -285 5866 5742 394 296 53 4 chr17 1346143 1346302 -84092178 + L1MC4a LINE L1 5500 5662 -580 566 240 128 25 chr17 1346318 1346560 -84091920 + L1MC4a LINE L1 5712 5978 -1830 1007 83 0 0 chr17 1346564 1346685 -84091795 + AluY SINE Alu 1 121 -190 182 61 0 30 chr17 1346685 1346718 -84091762 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 1869 186 3 0 chr17 1346722 1347028 -84091452 + AluJo SINE Alu 1 307 -5 1562 151 4 12 chr17 1354886 1355137 -84083343 + AluJo SINE Alu 30 278 -34 290 197 26 0 chr17 1355140 1355216 -84083264 + GA-rich Low_complexity Low_complexity 3 80 0 1242 211 48 0 chr17 1355360 1355630 -84082850 - MER58B DNA MER1_type -2 339 57 423 0 0 0 chr17 1355661 1355708 -84082772 + (CA)n Simple_repeat Simple_repeat 2 48 0 184 121 45 45 chr17 1355746 1355812 -84082668 + (CAGG)n Simple_repeat Simple_repeat 2 67 0 254 291 8 8 chr17 1355867 1355994 -84082486 + (CA)n Simple_repeat Simple_repeat 1 127 0 1861 169 0 3 chr17 1355995 1356290 -84082190 + AluSx SINE Alu 1 294 -18 2306 118 3 0 chr17 1356291 1356596 -84081884 + AluSq SINE Alu 1 306 -7 2354 98 13 7 chr17 1356596 1356902 -84081578 + AluSx SINE Alu 1 308 -4 207 284 11 21 chr17 1356981 1357076 -84081404 + (CATA)n Simple_repeat Simple_repeat 1 94 0 212 254 11 79 chr17 1357127 1357304 -84081176 + (CAGA)n Simple_repeat Simple_repeat 4 168 0 * 236 234 0 65 chr17 1357203 1357310 -84081170 + (CAGAGA)n Simple_repeat Simple_repeat 1 100 0 323 161 151 21 chr17 1357326 1357419 -84081061 + L1MB3 LINE L1 6079 6183 0 278 333 0 33 chr17 1357574 1357727 -84080753 + G-rich Low_complexity Low_complexity 2 149 0 1810 125 3 97 chr17 1357859 1358188 -84080292 + AluJb SINE Alu 1 298 -14 2244 188 41 46 chr17 1359057 1359641 -84078839 + L1MC4 LINE L1 7462 8042 0 329 323 39 8 chr17 1360500 1360627 -84077853 + MIR SINE MIR 117 247 -15 318 48 0 0 chr17 1360859 1360901 -84077579 + 5S rRNA rRNA 1 42 -79 313 162 118 0 chr17 1361002 1361070 -84077410 + MIR SINE MIR 187 262 0 239 331 74 33 chr17 1362940 1363061 -84075419 - L2 LINE L2 -14 3258 3133 203 241 0 19 chr17 1364029 1364083 -84074397 + G-rich Low_complexity Low_complexity 5 57 0 2075 160 108 5 chr17 1364968 1365356 -84073124 + MSTA LTR MaLR 1 428 0 1399 142 158 24 chr17 1365751 1366005 -84072475 - AluSg1 SINE Alu -21 288 1 266 367 51 25 chr17 1366124 1366320 -84072160 - L2 LINE L2 -493 2821 2621 815 144 0 30 chr17 1366480 1366601 -84071879 + FLAM_C SINE Alu 1 119 -193 217 86 0 0 chr17 1366601 1366636 -84071844 + (CAAAA)n Simple_repeat Simple_repeat 1 50 0 194 326 0 0 chr17 1367389 1367435 -84071045 + L2 LINE L2 3140 3185 -87 455 238 90 13 chr17 1367609 1367771 -84070709 - MIR SINE MIR -56 206 34 630 244 34 118 chr17 1367927 1368053 -84070427 + L1MD2 LINE L1 4358 4493 -1653 2134 100 19 32 chr17 1368053 1368362 -84070118 + AluSx SINE Alu 1 305 -7 630 244 34 118 chr17 1368362 1368649 -84069831 + L1MD2 LINE L1 4493 4736 -1410 636 211 55 0 chr17 1368665 1368793 -84069687 + AluJo SINE Alu 2 136 -176 5296 187 25 40 chr17 1368796 1369196 -84069284 + L1MD2 LINE L1 4889 5293 -1066 1794 168 16 10 chr17 1369196 1369505 -84068975 + AluJb SINE Alu 1 311 -1 5296 187 25 40 chr17 1369505 1370593 -84067887 + L1MD2 LINE L1 5293 6349 -10 252 111 0 0 chr17 1370849 1370894 -84067586 + (A)n Simple_repeat Simple_repeat 1 45 0 505 139 0 40 chr17 1371266 1371507 -84066973 + AluJ SINE Alu 2 312 0 21 36 0 0 chr17 1371507 1371535 -84066945 + AT_rich Low_complexity Low_complexity 1 28 0 2048 123 7 10 chr17 1371538 1371831 -84066649 + AluSx SINE Alu 1 292 -20 2205 123 3 0 chr17 1371833 1372133 -84066347 - AluSx SINE Alu -9 303 3 1260 73 6 0 chr17 1372277 1372441 -84066039 - L1PA5 LINE L1 -4 6150 5986 825 169 0 0 chr17 1372456 1372580 -84065900 - FLAM_C SINE Alu -19 124 1 759 150 0 18 chr17 1372624 1372842 -84065638 - AluJb SINE Alu -15 297 2 1927 184 147 42 chr17 1372948 1373330 -84065150 + L1ME1 LINE L1 5143 5484 -682 1689 155 58 0 chr17 1373330 1373608 -84064872 + AluSx SINE Alu 5 298 -14 1927 184 147 42 chr17 1373608 1373656 -84064824 + L1ME1 LINE L1 5484 5526 -640 2263 114 0 0 chr17 1373656 1373953 -84064527 + AluSx SINE Alu 1 297 -15 1927 184 147 42 chr17 1373953 1374171 -84064309 + L1ME1 LINE L1 5526 5828 -338 1640 186 3 14 chr17 1374194 1374484 -84063996 + AluJo SINE Alu 14 300 -12 353 300 50 50 chr17 1374584 1374804 -84063676 - MIR SINE MIR -19 243 24 975 182 0 13 chr17 1375886 1376045 -84062435 - AluJb SINE Alu -22 290 134 1681 198 3 0 chr17 1376596 1376879 -84061601 + AluSx SINE Alu 1 284 -28 2117 105 0 51 chr17 1376984 1377299 -84061181 - AluSx SINE Alu -13 299 1 201 167 0 0 chr17 1377692 1377728 -84060752 + (TA)n Simple_repeat Simple_repeat 1 36 0 1931 166 0 0 chr17 1377728 1378023 -84060457 - AluSx SINE Alu -17 295 1 23 33 0 0 chr17 1378122 1378152 -84060328 + AT_rich Low_complexity Low_complexity 1 30 0 1787 147 48 27 chr17 1378217 1378510 -84059970 + AluJo SINE Alu 1 299 -13 1947 143 0 23 chr17 1378513 1378848 -84059632 + AluSx SINE Alu 1 312 0 22 70 0 0 chr17 1378856 1378899 -84059581 + AT_rich Low_complexity Low_complexity 1 43 0 1648 164 12 53 chr17 1378904 1379227 -84059253 + AluSx SINE Alu 1 310 -2 201 254 0 0 chr17 1379509 1379568 -84058912 + (TA)n Simple_repeat Simple_repeat 1 59 0 943 160 0 18 chr17 1379897 1380066 -84058414 + FRAM SINE Alu 1 166 0 200 398 42 0 chr17 1380492 1380610 -84057870 - L2 LINE L2 -4 3268 3146 1581 181 57 0 chr17 1380814 1381095 -84057385 + AluJb SINE Alu 3 299 -13 1828 128 36 43 chr17 1381123 1381287 -84057193 - AluSx SINE Alu -9 303 140 2199 101 7 3 chr17 1381287 1381574 -84056906 - AluSx SINE Alu -20 292 5 1828 128 36 43 chr17 1381574 1381714 -84056766 - AluSx SINE Alu -172 140 1 198 209 0 0 chr17 1381761 1381804 -84056676 - MIR SINE MIR 0 262 220 793 242 10 48 chr17 1381869 1382154 -84056326 + LTR16A LTR ERVL 107 434 -16 800 178 0 0 chr17 1382192 1382327 -84056153 - FLAM_A SINE Alu 0 142 8 28 0 0 0 chr17 1382671 1382699 -84055781 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr17 1383008 1383031 -84055449 + AT_rich Low_complexity Low_complexity 1 23 0 2502 57 0 7 chr17 1383297 1383598 -84054882 + AluY SINE Alu 1 299 -12 437 212 144 17 chr17 1384923 1385041 -84053439 + MER94 DNA DNA 1 133 -1 213 121 0 0 chr17 1387127 1387160 -84051320 + (CA)n Simple_repeat Simple_repeat 2 34 0 22 56 0 0 chr17 1389104 1389140 -84049340 + AT_rich Low_complexity Low_complexity 1 36 0 239 218 91 18 chr17 1389168 1389333 -84049147 - L1ME4a LINE L1 -33 6088 5912 2266 97 0 7 chr17 1389644 1389954 -84048526 + AluSc SINE Alu 2 309 0 2324 66 11 0 chr17 1390182 1390469 -84048011 + AluY SINE Alu 1 290 -21 1318 160 22 9 chr17 1390691 1390922 -84047558 + L1MC1 LINE L1 6095 6328 -5 182 191 64 0 chr17 1390947 1390994 -84047486 - L2 LINE L2 -3 3310 3261 2132 128 0 0 chr17 1391017 1391329 -84047151 + AluSx SINE Alu 1 312 0 521 266 46 66 chr17 1391359 1391419 -84047061 + L1ME LINE L1 5517 5577 -585 1822 165 0 52 chr17 1391419 1391747 -84046733 + AluJo SINE Alu 1 311 -1 521 266 46 66 chr17 1391747 1391839 -84046641 + L1ME LINE L1 5577 5669 -493 1545 183 68 4 chr17 1391839 1392118 -84046362 - AluJb SINE Alu -15 297 1 521 266 46 66 chr17 1392118 1392263 -84046217 + L1ME LINE L1 5669 5800 -362 1969 133 4 0 chr17 1392263 1392533 -84045947 + AluJo SINE Alu 1 271 -41 521 266 46 66 chr17 1392533 1392552 -84045928 + L1ME LINE L1 5800 5818 -344 302 93 0 0 chr17 1392583 1392626 -84045854 + MADE1 DNA Mariner 2 44 -36 2265 132 91 5 chr17 1393070 1393464 -84045016 + MSTA LTR MaLR 1 428 0 1875 134 35 3 chr17 1393665 1393949 -84044531 - AluSx SINE Alu -19 293 1 939 269 57 61 chr17 1393972 1394652 -84043828 - L2 LINE L2 -5 3308 2625 186 43 0 0 chr17 1395831 1395854 -84042626 + (GAAAA)n Simple_repeat Simple_repeat 2 24 0 299 275 62 39 chr17 1395893 1396071 -84042409 + L1MEd LINE L1 5 186 -5933 500 289 98 48 chr17 1396289 1396626 -84041854 + L1MEd LINE L1 860 1179 -1805 324 0 0 0 chr17 1396626 1396662 -84041818 + (CCAA)n Simple_repeat Simple_repeat 2 37 0 500 289 98 48 chr17 1396662 1397105 -84041375 + L1MEd LINE L1 1179 1598 -1386 1740 131 10 89 chr17 1397105 1397418 -84041062 + AluSx SINE Alu 1 288 -24 500 289 98 48 chr17 1397418 1397823 -84040657 + L1MEd LINE L1 1598 2123 -861 * 3578 203 45 62 chr17 1397805 1397936 -84040544 + L1ME1 LINE L1 5187 5319 -847 2147 98 4 0 chr17 1397936 1398212 -84040268 + AluSp SINE Alu 34 310 -3 2004 116 18 4 chr17 1398213 1398527 -84039953 + AluSg SINE Alu 1 318 0 2032 99 0 31 chr17 1398536 1398828 -84039652 + AluSx SINE Alu 14 296 -16 3578 203 45 62 chr17 1398828 1399660 -84038820 + L1ME1 LINE L1 5327 6162 -4 591 233 91 47 chr17 1399731 1399965 -84038515 + L1ME3A LINE L1 5708 5948 -218 2082 135 0 26 chr17 1399968 1400142 -84038338 - AluSx SINE Alu -9 303 139 2275 85 7 10 chr17 1400142 1400437 -84038043 - AluSq SINE Alu -19 294 1 2082 135 0 26 chr17 1400437 1400573 -84037907 - AluSx SINE Alu -173 139 1 228 135 0 0 chr17 1400589 1400626 -84037854 + (CATATA)n Simple_repeat Simple_repeat 4 40 0 387 235 45 68 chr17 1400669 1400801 -84037679 + L1ME3A LINE L1 5965 6093 -77 284 276 97 48 chr17 1401402 1401547 -84036933 + MIR SINE MIR 72 223 -39 2593 80 0 0 chr17 1401814 1402154 -84036326 + AluSx SINE Alu 1 340 0 279 0 0 0 chr17 1402216 1402247 -84036233 + (A)n Simple_repeat Simple_repeat 1 31 0 2257 82 0 4 chr17 1403326 1403607 -84034873 + AluSg SINE Alu 1 280 -30 24 32 0 0 chr17 1404134 1404165 -84034315 + AT_rich Low_complexity Low_complexity 1 31 0 224 304 0 0 chr17 1404423 1404479 -84034001 - L2 LINE L2 -3 3269 3214 23 54 0 0 chr17 1406148 1406185 -84032295 + AT_rich Low_complexity Low_complexity 1 37 0 2095 111 3 3 chr17 1406185 1406473 -84032007 - AluSx SINE Alu -24 288 1 21 36 0 0 chr17 1406605 1406633 -84031847 + AT_rich Low_complexity Low_complexity 1 28 0 1104 129 6 6 chr17 1406633 1406796 -84031684 - AluSg/x SINE Alu -27 283 121 192 40 0 0 chr17 1407673 1407698 -84030782 + (GGGAA)n Simple_repeat Simple_repeat 3 27 0 459 0 0 0 chr17 1408612 1408663 -84029817 + (CA)n Simple_repeat Simple_repeat 1 51 0 2111 93 72 0 chr17 1409000 1409278 -84029202 - AluSq SINE Alu -15 298 1 22 35 0 0 chr17 1410717 1410746 -84027734 + AT_rich Low_complexity Low_complexity 1 29 0 338 174 116 12 chr17 1411307 1411393 -84027087 + L1ME4a LINE L1 5710 5804 -317 419 224 68 20 chr17 1411481 1411628 -84026852 + L1ME4a LINE L1 5944 6097 -24 25 51 0 0 chr17 1411717 1411756 -84026724 + AT_rich Low_complexity Low_complexity 1 39 0 246 273 91 53 chr17 1412406 1412538 -84025942 - MIR3 SINE MIR -1 207 71 270 195 26 52 chr17 1413158 1413235 -84025245 - L3b LINE CR1 -87 1496 1422 825 108 0 25 chr17 1413481 1413601 -84024879 - FLAM_C SINE Alu -16 117 1 898 202 106 5 chr17 1413817 1414015 -84024465 + MER20 DNA MER1_type 2 219 0 2345 67 0 57 chr17 1414141 1414456 -84024024 + AluY SINE Alu 1 297 -14 882 157 119 0 chr17 1414466 1414625 -84023855 + FAM SINE Alu 1 49 0 2089 128 3 0 chr17 1415309 1415598 -84022882 + AluSx SINE Alu 1 290 -22 2124 140 3 0 chr17 1417294 1417594 -84020886 - AluSx SINE Alu -10 302 2 2001 146 3 7 chr17 1417597 1417892 -84020588 - AluJo SINE Alu -18 294 1 478 285 39 0 chr17 1417893 1418023 -84020457 - Charlie8 DNA MER1_type -2278 139 5 2261 99 0 3 chr17 1418574 1418887 -84019593 + AluSq SINE Alu 1 312 -1 222 260 52 39 chr17 1418915 1418992 -84019488 - MIR SINE MIR -99 109 32 185 206 0 0 chr17 1419033 1419067 -84019413 + MIR SINE MIR 65 98 -164 457 231 34 0 chr17 1419125 1419242 -84019238 + L1MC4 LINE L1 7922 8042 0 1935 130 23 0 chr17 1419416 1419716 -84018764 + AluSx SINE Alu 1 307 -5 1941 123 41 0 chr17 1419722 1419840 -84018640 + AluSg SINE Alu 1 113 -197 222 37 0 0 chr17 1419840 1419867 -84018613 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1941 123 41 0 chr17 1419867 1420041 -84018439 + AluSg SINE Alu 113 305 -5 251 275 14 14 chr17 1420114 1420183 -84018297 - MIR3 SINE MIR -129 79 11 2303 51 0 24 chr17 1420802 1421096 -84017384 - AluY SINE Alu -17 294 8 1295 184 3 89 chr17 1421206 1421533 -84016947 - AluJo SINE Alu -12 300 2 1750 158 14 0 chr17 1422303 1422594 -84015886 - AluJo SINE Alu -17 295 1 2314 78 7 0 chr17 1423730 1424039 -84014441 + AluSp SINE Alu 1 311 -2 2121 86 41 0 chr17 1424042 1424334 -84014146 + AluSc SINE Alu 1 304 -5 355 331 35 14 chr17 1424397 1424542 -84013938 + MIR3 SINE MIR 2 149 -59 355 293 67 43 chr17 1424561 1424725 -84013755 - MER5B DNA MER1_type -10 168 1 1740 152 26 69 chr17 1424741 1425030 -84013450 + MER58B DNA MER1_type 9 283 -2137 1956 60 0 8 chr17 1425030 1425318 -84013162 - AluY SINE Alu 0 321 36 1740 152 26 69 chr17 1425318 1425375 -84013105 + MER58B DNA MER1_type 283 341 0 1907 147 0 0 chr17 1426246 1426545 -84011935 - AluSx SINE Alu -13 299 1 341 321 177 55 chr17 1426624 1426951 -84011529 - L2 LINE L2 0 3272 2906 2785 7 0 0 chr17 1427033 1427343 -84011137 + AluY SINE Alu 1 310 -1 333 236 14 0 chr17 1427357 1427429 -84011051 - L2 LINE L2 -561 2753 2681 5330 54 9 6 chr17 1427447 1428134 -84010346 + SVA Other Other 719 1386 0 1578 171 0 43 chr17 1428390 1428694 -84009786 + AluJb SINE Alu 1 291 -21 225 83 0 0 chr17 1428862 1428898 -84009582 + (TATG)n Simple_repeat Simple_repeat 2 37 0 974 108 0 51 chr17 1428900 1428991 -84009489 - AluSg/x SINE Alu -26 283 202 2222 77 20 3 chr17 1428991 1429288 -84009192 - AluSc SINE Alu -7 302 1 974 108 0 51 chr17 1429288 1429353 -84009127 - AluSg/x SINE Alu -107 202 135 359 220 43 26 chr17 1429478 1429604 -84008876 + L2 LINE L2 2764 2952 -361 1991 107 30 3 chr17 1429647 1429946 -84008534 + AluSg SINE Alu 1 307 -3 267 103 0 0 chr17 1429949 1429988 -84008492 + (CA)n Simple_repeat Simple_repeat 2 40 0 472 225 176 7 chr17 1430003 1430145 -84008335 - MIR SINE MIR -10 252 87 1900 140 3 7 chr17 1430184 1430484 -84007996 + AluSx SINE Alu 1 299 -13 1277 164 22 4 chr17 1430491 1430723 -84007757 + AluJo SINE Alu 61 296 -16 1762 130 58 0 chr17 1430729 1431006 -84007474 + AluSg SINE Alu 6 298 -12 1629 118 121 4 chr17 1431333 1431605 -84006875 + AluJb SINE Alu 1 304 -8 2175 105 0 13 chr17 1432623 1432936 -84005544 + AluSx SINE Alu 1 309 -3 2260 82 0 25 chr17 1432936 1433250 -84005230 + AluY SINE Alu 1 307 -4 302 272 12 0 chr17 1433274 1433355 -84005125 + L1ME3A LINE L1 6065 6146 -24 1967 151 0 0 chr17 1436530 1436828 -84001652 + AluSx SINE Alu 1 298 -14 380 222 86 0 chr17 1437067 1437148 -84001332 + MER20B DNA MER1_type 88 175 -608 1934 99 35 0 chr17 1437148 1437432 -84001048 + AluSx SINE Alu 1 294 -18 515 182 159 30 chr17 1437533 1437665 -84000815 - MER58C DNA MER1_type -8 207 59 1292 188 38 24 chr17 1439123 1439410 -83999070 - AluJb SINE Alu -20 292 2 2376 78 0 0 chr17 1439608 1439957 -83998523 - AluY SINE Alu 0 349 1 738 188 8 0 chr17 1439984 1440112 -83998368 - FLAM_C SINE Alu -12 131 3 1862 133 0 41 chr17 1440405 1440540 -83997940 + AluSx SINE Alu 5 144 -168 2205 82 0 3 chr17 1440540 1440832 -83997648 + AluY SINE Alu 1 291 -20 2292 57 0 51 chr17 1440836 1441152 -83997328 + AluY SINE Alu 4 303 -8 1862 133 0 41 chr17 1441152 1441326 -83997154 + AluSx SINE Alu 147 306 -6 348 325 17 8 chr17 1441672 1441789 -83996691 - MIR SINE MIR -88 174 57 1009 168 0 0 chr17 1441793 1441960 -83996520 + FRAM SINE Alu 1 167 -9 1647 181 10 3 chr17 1442240 1442532 -83995948 + AluJo SINE Alu 3 296 -16 516 135 14 0 chr17 1442929 1443003 -83995477 + AluJ/FLAM SINE Alu 2 76 -236 1805 130 91 0 chr17 1443016 1443301 -83995179 - AluSx SINE Alu -1 311 1 2181 110 0 3 chr17 1443342 1443651 -83994829 + AluSx SINE Alu 1 308 -4 21 0 0 0 chr17 1443655 1443676 -83994804 + AT_rich Low_complexity Low_complexity 1 21 0 185 289 0 0 chr17 1444145 1444190 -83994290 + L2 LINE L2 2933 2977 -336 2886 185 25 74 chr17 1444342 1444567 -83993913 - MER82 DNA MER2_type 0 653 418 2168 73 28 0 chr17 1444567 1444853 -83993627 + AluY SINE Alu 1 294 -17 2886 185 25 74 chr17 1444853 1445144 -83993336 - MER82 DNA MER2_type -235 418 177 1800 139 0 32 chr17 1445144 1445289 -83993191 + AluSx SINE Alu 1 149 -163 1688 120 94 0 chr17 1445289 1445564 -83992916 + AluSg SINE Alu 1 301 -9 1800 139 0 32 chr17 1445564 1445728 -83992752 + AluSx SINE Alu 149 300 -12 2886 185 25 74 chr17 1445728 1445897 -83992583 - MER82 DNA MER2_type -476 177 1 1190 197 33 0 chr17 1445938 1446151 -83992329 + MER58A DNA MER1_type 1 220 -4 715 188 0 0 chr17 1446758 1446870 -83991610 + FLAM_C SINE Alu 9 120 -23 2001 128 0 0 chr17 1447050 1447346 -83991134 + AluSx SINE Alu 1 296 -16 1920 127 27 3 chr17 1448304 1448596 -83989884 - AluSp SINE Alu -14 299 1 2297 81 3 0 chr17 1448696 1448991 -83989489 - AluSp SINE Alu -17 296 1 2279 46 11 0 chr17 1449034 1449375 -83989105 - AluY SINE Alu 0 344 1 1641 182 0 10 chr17 1449673 1449969 -83988511 + AluJb SINE Alu 1 293 -19 2238 90 0 7 chr17 1450115 1450415 -83988065 - AluSx SINE Alu -14 298 1 252 269 35 122 chr17 1450532 1450590 -83987890 + L2 LINE L2 2689 2750 -564 655 143 17 0 chr17 1450590 1450709 -83987771 + L1MA4 LINE L1 6169 6289 -11 252 269 35 122 chr17 1450709 1450847 -83987633 + L2 LINE L2 2750 2868 -446 * 725 315 76 60 chr17 1450839 1451661 -83986819 - L2 LINE L2 -2 3270 2453 2259 86 0 7 chr17 1452171 1452473 -83986007 - AluSg SINE Alu -10 300 1 1172 173 122 0 chr17 1452726 1452963 -83985517 + AluJo SINE Alu 16 281 -31 322 141 218 39 chr17 1452976 1453054 -83985426 - AluJb SINE Alu -10 292 201 1399 181 50 11 chr17 1453062 1453339 -83985141 - AluJo SINE Alu -24 288 1 607 307 100 40 chr17 1453339 1453861 -83984619 + L2 LINE L2 2464 3020 -252 223 293 311 0 chr17 1453945 1454051 -83984429 + L2 LINE L2 3174 3312 -1 225 0 0 0 chr17 1454301 1454326 -83984154 + (A)n Simple_repeat Simple_repeat 1 25 0 2132 109 3 0 chr17 1454799 1455093 -83983387 + AluSq SINE Alu 1 295 -18 392 153 0 0 chr17 1455408 1455467 -83983013 - U4 snRNA snRNA -86 59 1 21 0 0 0 chr17 1456260 1456281 -83982199 + AT_rich Low_complexity Low_complexity 1 21 0 237 273 26 0 chr17 1456352 1456429 -83982051 + GA-rich Low_complexity Low_complexity 1 79 0 289 323 139 27 chr17 1456579 1456802 -83981678 + MIR SINE MIR 15 262 0 473 210 49 49 chr17 1456847 1457009 -83981471 + MER104 DNA Tc2 1 162 -18 4796 187 30 30 chr17 1457360 1457467 -83981013 + L1MB2 LINE L1 4280 4386 -1785 624 199 0 57 chr17 1457467 1457579 -83980901 + AluJo/FLAM SINE Alu 1 105 -197 2128 125 0 0 chr17 1457579 1457884 -83980596 - AluSx SINE Alu -7 305 1 624 199 0 57 chr17 1457884 1457912 -83980568 + AluJo/FLAM SINE Alu 105 133 -169 4796 187 30 30 chr17 1457912 1458834 -83979646 + L1MB2 LINE L1 4386 5318 -853 2313 51 41 0 chr17 1458834 1459129 -83979351 - AluYa5 SINE Alu -4 307 1 4796 187 30 30 chr17 1459129 1459940 -83978540 + L1MB2 LINE L1 5318 6128 -43 2097 115 0 0 chr17 1459942 1460238 -83978242 + AluSx SINE Alu 1 296 -16 1788 152 14 7 chr17 1460250 1460547 -83977933 + AluSx SINE Alu 3 301 -11 1768 133 6 60 chr17 1460559 1460708 -83977772 + AluJb SINE Alu 1 126 -186 2564 43 0 0 chr17 1460708 1461011 -83977469 + AluY SINE Alu 1 303 -8 1768 133 6 60 chr17 1461011 1461178 -83977302 + AluJb SINE Alu 126 300 -12 1671 159 3 7 chr17 1461184 1461467 -83977013 + AluJo SINE Alu 1 282 -30 1784 128 17 17 chr17 1461545 1461835 -83976645 + AluSx SINE Alu 2 291 -21 246 62 0 0 chr17 1461847 1461879 -83976601 + (TA)n Simple_repeat Simple_repeat 1 32 0 485 180 172 0 chr17 1461894 1462016 -83976464 + L1M4 LINE L1 5321 5463 -715 2711 196 68 44 chr17 1462016 1462800 -83975680 + L1MB5 LINE L1 4618 5425 -744 836 170 52 72 chr17 1462796 1462960 -83975520 + L1MB5 LINE L1 5893 6054 -120 * 2532 40 0 0 chr17 1462960 1463262 -83975218 + AluY SINE Alu 1 302 -9 836 170 52 72 chr17 1463262 1463291 -83975189 + L1MB5 LINE L1 6054 6082 -92 1185 131 115 37 chr17 1463538 1463782 -83974698 + AluJo SINE Alu 39 301 -11 252 281 176 8 chr17 1465178 1465311 -83973169 + MIR SINE MIR 32 190 -72 1951 122 0 14 chr17 1465393 1465680 -83972800 - AluSx SINE Alu -25 287 5 207 0 0 0 chr17 1466276 1466299 -83972181 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 288 350 53 78 chr17 1466350 1466787 -83971693 + L2 LINE L2 2827 3252 -20 2005 125 3 7 chr17 1466790 1467087 -83971393 - AluSx SINE Alu -16 296 1 356 266 176 38 chr17 1467276 1467543 -83970937 + L2 LINE L2 1698 2001 -1313 354 323 195 22 chr17 1467587 1468333 -83970147 + L2 LINE L2 2203 3082 -190 1116 184 94 15 chr17 1468358 1468621 -83969859 + MER1B DNA MER1_type 1 334 -5 2041 127 0 31 chr17 1468622 1468945 -83969535 + AluSq SINE Alu 1 313 0 315 320 0 0 chr17 1469045 1469123 -83969357 + L2 LINE L2 3194 3271 -1 272 133 17 0 chr17 1469474 1469534 -83968946 + (CA)n Simple_repeat Simple_repeat 2 62 0 2609 64 3 6 chr17 1470348 1470660 -83967820 + AluY SINE Alu 1 311 0 2138 68 0 0 chr17 1473471 1473737 -83964743 + AluY SINE Alu 1 266 -45 1934 152 0 0 chr17 1473881 1474170 -83964310 + AluJo SINE Alu 1 289 -23 2271 81 7 0 chr17 1474172 1474479 -83964001 + AluY SINE Alu 1 309 -2 228 269 0 13 chr17 1475430 1475508 -83962972 + G-rich Low_complexity Low_complexity 2 78 0 203 240 10 42 chr17 1475867 1475963 -83962517 + (CGAGG)n Simple_repeat Simple_repeat 2 94 0 2232 59 31 21 chr17 1476165 1476453 -83962027 - AluSx SINE Alu -21 291 1 977 89 0 41 chr17 1476539 1476685 -83961795 + AluSg/x SINE Alu 155 294 -16 593 299 48 51 chr17 1477301 1477595 -83960885 + HAL1 LINE L1 1116 1408 -1099 2452 79 7 3 chr17 1477605 1477909 -83960571 - AluSq SINE Alu -8 305 1 2082 104 17 3 chr17 1477946 1478235 -83960245 + AluSx SINE Alu 1 293 -19 2365 96 0 0 chr17 1478345 1478646 -83959834 + AluSx SINE Alu 1 301 -11 247 366 0 12 chr17 1479275 1479439 -83959041 + (TGG)n Simple_repeat Simple_repeat 1 162 0 235 264 64 16 chr17 1479986 1480111 -83958369 + L1M4 LINE L1 2873 3003 -3143 209 293 193 14 chr17 1480330 1480470 -83958010 + L2 LINE L2 2301 2465 -849 1692 117 144 4 chr17 1480487 1480743 -83957737 + AluSg1 SINE Alu 1 292 -17 2262 92 7 3 chr17 1480747 1481052 -83957428 + AluSq SINE Alu 1 306 0 807 170 0 0 chr17 1481052 1481173 -83957307 - AluJo SINE Alu -185 127 1 401 211 0 0 chr17 1482170 1482257 -83956223 - L1M3 LINE L1 -517 5639 5565 955 156 65 0 chr17 1482263 1482417 -83956063 - AluJb SINE Alu -148 164 1 1966 144 0 46 chr17 1482474 1482656 -83955824 - AluSx SINE Alu -1 311 149 2519 73 0 0 chr17 1482656 1482956 -83955524 - AluY SINE Alu -11 300 1 1966 144 0 46 chr17 1482956 1483099 -83955381 - AluSx SINE Alu -163 149 1 545 148 176 0 chr17 1483104 1483212 -83955268 - FRAM SINE Alu 0 176 50 1745 168 10 17 chr17 1483264 1483561 -83954919 + AluJb SINE Alu 1 295 -17 1872 175 0 28 chr17 1483838 1484158 -83954322 + AluJo SINE Alu 1 311 -1 420 240 124 46 chr17 1484159 1484225 -83954255 + L1ME4a LINE L1 5369 5428 -693 2237 109 0 0 chr17 1484225 1484518 -83953962 + AluY SINE Alu 2 294 -17 420 240 124 46 chr17 1484518 1484813 -83953667 + L1ME4a LINE L1 5428 5751 -370 830 215 80 6 chr17 1484838 1485001 -83953479 - FAM SINE Alu 0 175 1 2294 88 10 0 chr17 1485058 1485352 -83953128 + AluSx SINE Alu 1 297 -15 2298 106 10 0 chr17 1485364 1485665 -83952815 + AluSq SINE Alu 1 304 -9 241 267 33 33 chr17 1485795 1485915 -83952565 + L1ME4a LINE L1 6000 6119 -2 2252 114 0 7 chr17 1486078 1486212 -83952268 + AluSp SINE Alu 1 134 -179 2671 50 0 0 chr17 1486212 1486514 -83951966 + AluY SINE Alu 1 302 -9 2252 114 0 7 chr17 1486514 1486685 -83951795 + AluSp SINE Alu 134 304 -9 63 36 0 0 chr17 1486738 1486822 -83951658 + AT_rich Low_complexity Low_complexity 1 84 0 2474 74 3 0 chr17 1486872 1487170 -83951310 + AluSg SINE Alu 1 299 -11 199 302 78 35 chr17 1487659 1487775 -83950705 - MIR SINE MIR -32 230 110 188 135 27 0 chr17 1487887 1487924 -83950556 + (TA)n Simple_repeat Simple_repeat 1 38 0 1464 165 149 26 chr17 1487929 1488238 -83950242 + MER7A DNA MER2_type 1 345 -1 1111 117 29 133 chr17 1488458 1488508 -83949972 + AluSq SINE Alu 87 141 -172 1976 141 3 44 chr17 1488508 1488617 -83949863 + AluSx SINE Alu 4 116 -196 2092 76 10 45 chr17 1488617 1488932 -83949548 - AluY SINE Alu 0 305 1 1976 141 3 44 chr17 1488932 1489140 -83949340 + AluSx SINE Alu 116 309 -3 2338 66 0 13 chr17 1489140 1489444 -83949036 + AluY SINE Alu 1 300 -11 1111 117 29 133 chr17 1489444 1489632 -83948848 + AluSq SINE Alu 139 301 -12 194 309 62 0 chr17 1489641 1489722 -83948758 - L2 LINE L2 -775 2539 2454 2039 134 10 19 chr17 1490047 1490360 -83948120 - AluJb SINE Alu -2 310 1 2172 83 35 54 chr17 1490367 1490680 -83947800 - AluY SINE Alu -4 307 1 964 233 185 6 chr17 1490893 1491249 -83947231 + L2 LINE L2 2046 2465 -849 1199 153 42 0 chr17 1491302 1491491 -83946989 - AluJo SINE Alu -115 197 1 1173 258 132 53 chr17 1491493 1491722 -83946758 + L2 LINE L2 2466 2676 -637 2466 82 0 0 chr17 1491722 1492028 -83946452 - AluY SINE Alu -5 306 1 1173 258 132 53 chr17 1492028 1492162 -83946318 + L2 LINE L2 2676 2798 -515 2373 93 7 0 chr17 1492162 1492464 -83946016 - AluSg SINE Alu -6 304 1 2005 146 0 7 chr17 1492471 1492772 -83945708 - AluSx SINE Alu -13 299 1 1173 258 132 53 chr17 1492772 1493156 -83945324 + L2 LINE L2 2803 3313 0 2208 94 7 17 chr17 1493693 1493991 -83944489 - AluSg SINE Alu -15 295 1 889 138 15 0 chr17 1494009 1494139 -83944341 - FLAM_C SINE Alu -11 132 1 2389 58 0 52 chr17 1494413 1494722 -83943758 - AluY SINE Alu -14 297 5 1701 136 0 0 chr17 1494732 1494975 -83943505 - AluSq SINE Alu -70 243 1 904 224 5 14 chr17 1496881 1497091 -83941389 - MER6B DNA MER2_type -2 208 1 2353 96 0 3 chr17 1497519 1497821 -83940659 - AluSg SINE Alu -9 301 1 1050 142 0 0 chr17 1497832 1497987 -83940493 - AluSq SINE Alu -8 305 151 781 164 59 110 chr17 1498588 1498733 -83939747 - AluJo SINE Alu -62 250 99 2290 112 0 0 chr17 1498733 1499029 -83939451 + AluSq SINE Alu 1 296 -17 781 164 59 110 chr17 1499029 1499044 -83939436 - AluJo SINE Alu -213 99 85 1944 162 0 3 chr17 1499044 1499346 -83939134 + AluSx SINE Alu 1 301 -11 781 164 59 110 chr17 1499346 1499403 -83939077 - AluJo SINE Alu -227 85 43 273 307 81 25 chr17 1499423 1499706 -83938774 + L1ME4a LINE L1 5628 5926 -195 2159 112 31 0 chr17 1499879 1500173 -83938307 + AluSx SINE Alu 1 303 -9 813 109 23 62 chr17 1500175 1500303 -83938177 + AluSq/x SINE Alu 1 123 -189 1564 96 0 24 chr17 1500305 1500545 -83937935 + AluSg/x SINE Alu 94 312 0 2652 45 0 13 chr17 1500549 1500858 -83937622 + AluY SINE Alu 5 309 -2 239 147 0 0 chr17 1500921 1500955 -83937525 - Alu SINE Alu -94 39 6 2363 81 3 10 chr17 1501833 1502131 -83936349 - AluSp SINE Alu -17 296 1 2524 142 51 5 chr17 1503248 1503657 -83934823 + MSTA LTR MaLR 1 428 0 2587 67 0 3 chr17 1504465 1504777 -83933703 + AluY SINE Alu 1 311 0 185 347 51 20 chr17 1506135 1506233 -83932247 + L2 LINE L2 3199 3299 -14 195 291 36 0 chr17 1507104 1507159 -83931321 + L2 LINE L2 3200 3256 -16 21 0 0 0 chr17 1507357 1507378 -83931102 + AT_rich Low_complexity Low_complexity 1 21 0 213 94 0 0 chr17 1509449 1509481 -83928999 + (CGG)n Simple_repeat Simple_repeat 2 33 0 21 89 0 0 chr17 1509723 1509779 -83928701 + GC_rich Low_complexity Low_complexity 1 56 0 23 54 0 0 chr17 1509987 1510024 -83928456 + GC_rich Low_complexity Low_complexity 1 37 0 409 197 171 26 chr17 1510465 1510582 -83927898 + L2 LINE L2 3177 3310 -3 2262 86 0 0 chr17 1510702 1510981 -83927499 + AluSx SINE Alu 16 294 -18 2042 100 3 37 chr17 1511056 1511355 -83927125 + AluSg SINE Alu 1 289 -21 2135 70 56 7 chr17 1511355 1511640 -83926840 + AluY SINE Alu 1 300 -11 2174 82 43 4 chr17 1512035 1512315 -83926165 - AluSc SINE Alu -15 294 4 2401 57 0 13 chr17 1512502 1512803 -83925677 - AluY SINE Alu -13 298 2 1433 110 186 13 chr17 1513039 1513304 -83925176 - AluSg1 SINE Alu 0 306 1 1687 210 120 51 chr17 1513666 1514061 -83924419 + L1ME3A LINE L1 5512 5965 -205 2072 105 6 37 chr17 1514061 1514384 -83924096 + AluSq SINE Alu 1 313 0 1687 210 120 51 chr17 1514384 1514598 -83923882 + L1ME3A LINE L1 5965 6163 -7 2272 86 3 7 chr17 1514629 1514921 -83923559 + AluSx SINE Alu 1 291 -21 395 274 89 30 chr17 1515659 1515794 -83922686 + MER5B DNA MER1_type 1 143 -35 648 151 0 19 chr17 1515796 1515902 -83922578 - MER5A DNA MER1_type -1 188 85 449 301 24 48 chr17 1516477 1516686 -83921794 - L2 LINE L2 -2 3311 3108 525 255 123 19 chr17 1516710 1516922 -83921558 + MIR SINE MIR 22 255 -7 1108 44 7 15 chr17 1517150 1517286 -83921194 + AluSq/x SINE Alu 1 135 -178 2505 42 0 13 chr17 1517286 1517592 -83920888 + AluY SINE Alu 1 302 -9 295 238 69 30 chr17 1517593 1517694 -83920786 - Charlie8 DNA MER1_type -2312 105 1 1643 158 3 38 chr17 1518798 1519090 -83919390 + AluJo SINE Alu 1 282 -30 211 71 0 0 chr17 1519091 1519119 -83919361 + (TTTA)n Simple_repeat Simple_repeat 1 180 0 2158 94 0 14 chr17 1519119 1519405 -83919075 - AluSx SINE Alu -1 309 1 22 0 0 0 chr17 1519408 1519430 -83919050 + AT_rich Low_complexity Low_complexity 1 22 0 701 199 0 15 chr17 1519635 1519771 -83918709 - FLAM_A SINE Alu -1 141 8 434 132 92 0 chr17 1520328 1520404 -83918076 + FLAM SINE Alu 42 124 -19 256 237 129 11 chr17 1520572 1520665 -83917815 + MIR SINE MIR 17 120 -142 1660 117 11 25 chr17 1520766 1521075 -83917405 - AluJb SINE Alu 0 310 6 1993 119 3 7 chr17 1521110 1521403 -83917077 + AluSx SINE Alu 1 292 -20 605 196 110 83 chr17 1521497 1521798 -83916682 + L1MC5 LINE L1 7605 7913 -48 2348 60 0 10 chr17 1521809 1522110 -83916370 - AluY SINE Alu -13 298 1 991 111 7 0 chr17 1522110 1522245 -83916235 - AluSq/x SINE Alu -176 136 1 379 276 39 103 chr17 1522246 1522355 -83916125 - L2 LINE L2 -1635 1679 1591 2134 114 0 25 chr17 1522355 1522671 -83915809 + AluSx SINE Alu 5 312 0 379 276 39 103 chr17 1522671 1522793 -83915687 - L2 LINE L2 -1723 1591 1463 347 271 43 129 chr17 1522799 1523001 -83915479 - MIR SINE MIR -7 255 78 2134 99 0 7 chr17 1523001 1523293 -83915187 + AluSx SINE Alu 6 295 -17 347 271 43 129 chr17 1523293 1523345 -83915135 - MIR SINE MIR -184 78 23 965 145 12 18 chr17 1523678 1523844 -83914636 - AluSx SINE Alu -101 211 47 2682 19 0 6 chr17 1524805 1525118 -83913362 - AluY SINE Alu 0 311 1 419 290 93 52 chr17 1525453 1525527 -83912953 - L1MC4a LINE L1 -1633 6175 6106 1244 192 0 64 chr17 1525527 1525840 -83912640 + AluSx SINE Alu 1 293 -9 419 290 93 52 chr17 1525840 1525958 -83912522 - L1MC4a LINE L1 -1702 6106 5975 1787 174 13 7 chr17 1525965 1526270 -83912210 - AluJo SINE Alu -5 307 1 1006 68 8 8 chr17 1526280 1526412 -83912068 - AluY SINE Alu -179 132 1 500 301 130 17 chr17 1526415 1526836 -83911644 - L1MC4a LINE L1 -344 5822 5497 683 121 16 8 chr17 1529449 1529573 -83908907 + L1PB1 LINE L1 5742 5866 -285 2166 110 3 10 chr17 1529573 1529882 -83908598 - AluSq SINE Alu -6 307 1 1574 180 3 17 chr17 1530515 1530809 -83907671 + AluJb SINE Alu 1 290 -22 2175 87 0 13 chr17 1530954 1531265 -83907215 - AluY SINE Alu 0 311 5 1848 125 3 26 chr17 1532166 1532471 -83906009 + AluSx SINE Alu 4 301 -11 224 296 56 0 chr17 1532728 1532799 -83905681 - MIR3 SINE MIR -50 158 84 328 281 66 33 chr17 1532914 1533035 -83905445 + MIR SINE MIR 17 141 -67 2186 100 7 3 chr17 1537943 1538244 -83900236 - AluSg SINE Alu -8 302 1 285 383 14 16 chr17 1540215 1540365 -83898115 + MIR3 SINE MIR 4 136 -72 223 240 20 0 chr17 1541533 1541583 -83896897 + CT-rich Low_complexity Low_complexity 2 52 0 443 275 54 72 chr17 1543792 1544014 -83894466 + MIR SINE MIR 28 245 -17 248 309 74 9 chr17 1544195 1544303 -83894177 - MIR SINE MIR -60 148 33 190 369 16 41 chr17 1545926 1546048 -83892432 + MIR SINE MIR 83 201 -61 406 239 17 34 chr17 1546115 1546232 -83892248 + MIR SINE MIR 17 131 -77 1677 176 0 22 chr17 1546621 1546940 -83891540 + AluJb SINE Alu 1 312 0 2090 82 0 26 chr17 1549575 1549880 -83888600 + AluSg SINE Alu 1 297 -13 331 282 69 23 chr17 1550403 1550534 -83887946 - MER5B DNA MER1_type 0 178 42 668 172 0 83 chr17 1550537 1550682 -83887798 + FLAM_C SINE Alu 1 133 0 1510 131 173 19 chr17 1550691 1550951 -83887529 + AluSg SINE Alu 1 300 0 185 304 0 0 chr17 1550977 1551023 -83887457 + MER5B DNA MER1_type 131 176 -2 507 148 0 0 chr17 1551306 1551394 -83887086 + (CCCCAG)n Simple_repeat Simple_repeat 3 90 0 192 97 0 0 chr17 1554188 1554219 -83884261 + (CAGA)n Simple_repeat Simple_repeat 4 34 0 1302 186 45 11 chr17 1554219 1554488 -83883992 - AluJo SINE Alu -34 278 1 189 292 62 15 chr17 1555084 1555149 -83883331 + L2 LINE L2 3190 3257 -15 1992 91 0 24 chr17 1555312 1555609 -83882871 - AluSx SINE Alu -22 290 1 378 290 38 26 chr17 1556176 1556347 -83882133 + MIR SINE MIR 38 209 -53 360 64 0 0 chr17 1557083 1557130 -83881350 + (TG)n Simple_repeat Simple_repeat 2 48 0 212 194 11 86 chr17 1560003 1560096 -83878384 + G-rich Low_complexity Low_complexity 2 87 0 2264 100 3 3 chr17 1561818 1562128 -83876352 - AluSp SINE Alu -3 310 1 1372 187 98 32 chr17 1562908 1563224 -83875256 + MER1B DNA MER1_type 1 337 0 2059 79 0 26 chr17 1563567 1563870 -83874610 - AluSx SINE Alu -17 295 1 219 287 44 52 chr17 1564009 1564145 -83874335 - L3b LINE CR1 -134 1449 1315 620 157 8 60 chr17 1564388 1564522 -83873958 - FLAM_A SINE Alu -2 131 5 220 350 29 10 chr17 1564578 1564681 -83873799 + L2 LINE L2 2957 3061 -211 246 185 33 43 chr17 1566529 1566621 -83871859 + G-rich Low_complexity Low_complexity 6 96 0 259 75 0 25 chr17 1566883 1566923 -83871557 + (CA)n Simple_repeat Simple_repeat 1 39 0 308 297 0 43 chr17 1567834 1567972 -83870508 + G-rich Low_complexity Low_complexity 4 135 0 196 260 0 55 chr17 1568231 1568304 -83870176 - L2 LINE L2 -41 3272 3204 203 267 17 17 chr17 1568629 1568689 -83869791 - MIR SINE MIR -71 137 78 209 259 35 12 chr17 1571617 1571702 -83866778 + C-rich Low_complexity Low_complexity 6 92 0 23 68 0 0 chr17 1573425 1573469 -83865011 + GC_rich Low_complexity Low_complexity 1 44 0 205 154 0 58 chr17 1573660 1573712 -83864768 + CT-rich Low_complexity Low_complexity 1 49 0 22 35 0 0 chr17 1573796 1573825 -83864655 + GC_rich Low_complexity Low_complexity 1 29 0 26 74 0 0 chr17 1574825 1574879 -83863601 + GC_rich Low_complexity Low_complexity 1 54 0 280 206 44 21 chr17 1575000 1575087 -83863393 - MIR SINE MIR -57 151 87 307 246 0 14 chr17 1576137 1576206 -83862274 + Tigger5 DNA MER2_type 1 68 -2255 2069 91 0 86 chr17 1576752 1577091 -83861389 + AluSx SINE Alu 1 310 -2 2455 84 0 7 chr17 1577439 1577747 -83860733 - AluSx SINE Alu -6 306 1 237 219 31 47 chr17 1578314 1578378 -83860102 - L2 LINE L2 -4 3268 3206 872 220 162 24 chr17 1578563 1578859 -83859621 - MER2 DNA MER2_type -8 337 1 782 147 7 29 chr17 1579146 1579282 -83859198 + FLAM_A SINE Alu 1 133 0 384 285 134 26 chr17 1580588 1580812 -83857668 + L1M4 LINE L1 2915 3113 -3033 2135 89 0 71 chr17 1580812 1581148 -83857332 + AluSx SINE Alu 1 312 0 2398 82 0 0 chr17 1581154 1581448 -83857032 + AluSg SINE Alu 1 294 -16 2752 22 0 16 chr17 1581457 1581773 -83856707 + AluY SINE Alu 1 311 0 384 285 134 26 chr17 1581773 1581822 -83856658 + L1M4 LINE L1 3124 5201 -945 542 319 65 56 chr17 1582847 1583121 -83855359 - L1ME4a LINE L1 -95 6026 5756 2477 53 0 30 chr17 1583121 1583425 -83855055 - AluY SINE Alu -16 295 1 1971 125 20 16 chr17 1583425 1583596 -83854884 - AluSx SINE Alu -7 305 130 210 37 0 0 chr17 1583596 1583623 -83854857 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1971 125 20 16 chr17 1583623 1583754 -83854726 - AluSx SINE Alu -182 130 1 542 319 65 56 chr17 1583754 1584048 -83854432 - L1ME4a LINE L1 -364 5757 5452 354 72 0 119 chr17 1584349 1584441 -83854039 - Alu SINE Alu -241 61 1 774 179 0 21 chr17 1584459 1584604 -83853876 - FLAM_C SINE Alu 0 143 2 1379 182 104 7 chr17 1584779 1584915 -83853565 + AluSx SINE Alu 1 122 -190 2383 99 7 0 chr17 1584915 1585218 -83853262 + AluSq SINE Alu 1 305 -8 1379 182 104 7 chr17 1585218 1585350 -83853130 + AluSx SINE Alu 122 295 -17 277 139 0 0 chr17 1585539 1585582 -83852898 + Alu SINE Alu 249 291 -11 202 292 0 0 chr17 1585634 1585682 -83852798 + L2 LINE L2 3223 3270 -2 2028 156 20 0 chr17 1585711 1586012 -83852468 + AluSx SINE Alu 1 307 -5 2375 103 0 0 chr17 1586012 1586323 -83852157 + AluSx SINE Alu 1 311 -1 715 155 69 27 chr17 1586333 1586569 -83851911 - MSTD LTR MaLR -19 371 87 2023 133 14 3 chr17 1586743 1587037 -83851443 - AluSx SINE Alu -15 297 1 2816 214 8 34 chr17 1587127 1587743 -83850737 + MER82 DNA MER2_type 2 601 -52 1670 167 47 7 chr17 1587743 1588019 -83850461 + AluJb SINE Alu 1 287 -25 1108 142 0 11 chr17 1588209 1588385 -83850095 + AluSg/x SINE Alu 139 312 0 480 260 115 35 chr17 1588401 1588601 -83849879 + MIR SINE MIR 20 235 -27 1036 240 67 6 chr17 1588712 1589054 -83849426 + L1MC/D LINE L1 4902 5264 -882 915 138 0 36 chr17 1589054 1589192 -83849288 + AluSq/x SINE Alu 1 133 -180 671 198 35 108 chr17 1589198 1589352 -83849128 + L1MC/D LINE L1 5319 5448 -911 1988 73 84 15 chr17 1589352 1589626 -83848854 + AluY SINE Alu 1 293 -18 671 198 35 108 chr17 1589626 1589729 -83848751 + L1MC/D LINE L1 5448 5557 -802 273 107 321 0 chr17 1589835 1589891 -83848589 + Tigger1 DNA MER2_type 159 232 -2186 803 138 32 0 chr17 1589934 1590057 -83848423 + FRAM SINE Alu 36 162 -14 1694 95 5 5 chr17 1590057 1590279 -83848201 + AluSc SINE Alu 1 222 -87 1391 122 54 71 chr17 1590281 1590407 -83848073 + Tigger1 DNA MER2_type 1454 1581 -837 1528 175 74 7 chr17 1590407 1590692 -83847788 + AluJb SINE Alu 1 304 -8 1391 122 54 71 chr17 1590692 1590754 -83847726 + Tigger1 DNA MER2_type 1581 1643 -775 2382 99 0 0 chr17 1590754 1591057 -83847423 + AluSg SINE Alu 1 303 -7 1391 122 54 71 chr17 1591057 1591163 -83847317 + Tigger1 DNA MER2_type 1643 1744 -674 2202 115 6 13 chr17 1591166 1591453 -83847027 + AluSx SINE Alu 1 287 -25 183 80 0 0 chr17 1591453 1591478 -83847002 + (CA)n Simple_repeat Simple_repeat 2 26 0 2202 115 6 13 chr17 1591478 1591503 -83846977 + AluSx SINE Alu 287 311 -1 1194 97 0 0 chr17 1591736 1591891 -83846589 + AluSg/x SINE Alu 150 304 -8 1350 124 0 10 chr17 1592043 1592244 -83846236 - MER1B DNA MER1_type 0 339 141 2297 92 10 3 chr17 1592688 1592994 -83845486 - AluY SINE Alu -3 308 1 519 103 23 11 chr17 1593010 1593097 -83845383 - AluY SINE Alu -180 131 44 1256 138 0 6 chr17 1593354 1593535 -83844945 + AluSg/x SINE Alu 126 305 -5 21 0 0 0 chr17 1593600 1593621 -83844859 + AT_rich Low_complexity Low_complexity 1 21 0 194 269 128 26 chr17 1594259 1594337 -83844143 + MIR SINE MIR 106 191 -71 396 274 30 90 chr17 1595371 1595446 -83843034 + MER5A DNA MER1_type 1 79 -110 2357 113 0 0 chr17 1595446 1595748 -83842732 + AluSp SINE Alu 1 302 -11 2356 96 7 0 chr17 1595758 1596060 -83842420 + AluSg SINE Alu 1 304 -6 396 274 30 90 chr17 1596060 1596174 -83842306 + MER5A DNA MER1_type 88 189 0 326 312 46 0 chr17 1596336 1596445 -83842035 + L1MC/D LINE L1 5703 5816 -1992 1965 118 0 58 chr17 1596457 1596770 -83841710 + AluJb SINE Alu 3 297 -15 1740 86 52 0 chr17 1596774 1597007 -83841473 + AluY SINE Alu 1 245 -66 1470 115 0 5 chr17 1597107 1597307 -83841173 + AluSg/x SINE Alu 104 302 -10 2211 93 4 4 chr17 1597314 1597642 -83840838 + AluSc SINE Alu 1 328 0 1806 129 0 0 chr17 1598076 1598316 -83840164 + AluSx SINE Alu 52 291 -21 662 208 120 5 chr17 1598327 1598519 -83839961 + L1ME1 LINE L1 5742 5955 -211 1936 177 0 0 chr17 1598519 1598813 -83839667 + AluJb SINE Alu 1 294 -18 2385 65 24 0 chr17 1598956 1599246 -83839234 - AluY SINE Alu -14 297 1 2327 123 0 0 chr17 1599246 1599554 -83838926 - AluSx SINE Alu -4 308 1 933 277 89 48 chr17 1599560 1599881 -83838599 - HAL1 LINE L1 0 2507 2201 2348 86 3 10 chr17 1599881 1600184 -83838296 - AluSp SINE Alu -12 301 1 933 277 89 48 chr17 1600184 1600544 -83837936 - HAL1 LINE L1 -306 2201 1798 341 245 126 7 chr17 1600584 1600727 -83837753 - L1ME4a LINE L1 -16 6105 5946 234 123 70 18 chr17 1601036 1601093 -83837387 - MER3 DNA MER1_type -7 202 143 2173 113 0 36 chr17 1601093 1601402 -83837078 - AluSq SINE Alu -15 298 1 1741 122 0 4 chr17 1601404 1601641 -83836839 - AluSx SINE Alu -23 289 54 977 118 24 18 chr17 1601754 1601924 -83836556 + L1MB4 LINE L1 6009 6179 -1 1708 159 0 53 chr17 1602059 1602391 -83836089 - AluJo SINE Alu 0 316 1 31 26 0 0 chr17 1602655 1602693 -83835787 + AT_rich Low_complexity Low_complexity 1 38 0 204 294 165 0 chr17 1602785 1602894 -83835586 + L2 LINE L2 2442 2568 -746 1080 178 146 66 chr17 1602922 1603209 -83835271 - AluJo SINE Alu 0 312 3 332 310 103 54 chr17 1603211 1603472 -83835008 + L2 LINE L2 2616 2889 -425 975 68 0 0 chr17 1603493 1603611 -83834869 - AluSc SINE Alu -17 292 175 290 279 52 64 chr17 1603615 1603787 -83834693 + L2 LINE L2 2941 3110 -162 1086 122 6 6 chr17 1604265 1604421 -83834059 + AluSq SINE Alu 1 156 -157 500 115 35 35 chr17 1604425 1604512 -83833968 - L1M3 LINE L1 -514 5669 5583 269 211 146 89 chr17 1604620 1604743 -83833737 + MLT1I LTR MaLR 48 177 -232 209 179 0 90 chr17 1604940 1605007 -83833473 + T-rich Low_complexity Low_complexity 1 61 0 1546 142 0 0 chr17 1605322 1605534 -83832946 - AluJb SINE Alu -6 306 95 427 133 0 0 chr17 1605540 1605600 -83832880 - AluJb SINE Alu -158 154 95 970 164 0 31 chr17 1605606 1605765 -83832715 - AluJo SINE Alu -158 154 1 696 126 0 0 chr17 1606158 1606261 -83832219 - AluSg/x SINE Alu -11 299 197 596 174 0 37 chr17 1606260 1606369 -83832111 + AluJb SINE Alu 202 306 -6 * 2134 126 10 3 chr17 1606462 1606763 -83831717 - AluSq SINE Alu -7 306 4 2163 97 0 7 chr17 1607441 1607748 -83830732 - AluSx SINE Alu 0 312 22 1008 116 123 0 chr17 1607848 1607994 -83830486 - AluSq SINE Alu -149 164 1 475 270 32 0 chr17 1608005 1608160 -83830320 + L1MC/D LINE L1 5649 5811 -330 1737 79 0 0 chr17 1608166 1608381 -83830099 - AluY SINE Alu -2 309 95 1200 66 0 26 chr17 1608382 1608533 -83829947 - AluY SINE Alu -164 147 1 2370 87 3 7 chr17 1608533 1608833 -83829647 - AluSq SINE Alu -14 299 1 1307 128 0 0 chr17 1610239 1610419 -83828061 - AluSg/x SINE Alu 0 312 133 674 181 60 15 chr17 1610419 1610552 -83827928 + AluJo SINE Alu 14 152 -160 2092 114 3 11 chr17 1610654 1611005 -83827475 - L1PBa LINE L1 -4103 2760 2413 1603 92 9 0 chr17 1611005 1611234 -83827246 + THE1A LTR MaLR 125 355 0 1308 137 15 5 chr17 1611237 1611441 -83827039 + AluJb SINE Alu 107 312 0 1414 121 7 0 chr17 1611669 1611923 -83826557 + L1PA13 LINE L1 5845 6149 -14 2250 103 0 7 chr17 1612183 1612473 -83826007 - AluSc SINE Alu -21 288 1 1144 222 4 50 chr17 1613006 1613267 -83825213 + AluJo SINE Alu 43 291 -21 183 361 21 0 chr17 1613303 1613400 -83825080 + MIR SINE MIR 108 206 -56 950 145 47 47 chr17 1613526 1613698 -83824782 + AluJb SINE Alu 1 172 -140 533 495 55 24 chr17 1613736 1614025 -83824455 + AluJb SINE Alu 2 299 -3 2017 156 0 7 chr17 1614134 1614442 -83824038 + AluJb SINE Alu 1 306 -6 363 23 0 0 chr17 1614626 1614670 -83823810 + (TG)n Simple_repeat Simple_repeat 2 45 0 1309 52 0 0 chr17 1614681 1614834 -83823646 - AluY SINE Alu -7 304 152 403 82 0 0 chr17 1614834 1614883 -83823597 - Alu SINE Alu -261 50 2 2367 96 0 3 chr17 1615250 1615551 -83822929 - AluSg SINE Alu -10 300 1 2086 101 3 18 chr17 1616407 1616720 -83821760 - AluSq SINE Alu 0 312 4 1525 116 4 42 chr17 1616923 1617164 -83821316 + AluSg/x SINE Alu 71 302 -8 2385 91 0 0 chr17 1617491 1617789 -83820691 - AluSx SINE Alu -13 299 2 1037 152 0 43 chr17 1617809 1617993 -83820487 - AluSg/x SINE Alu 0 312 137 1863 163 27 3 chr17 1618000 1618300 -83820180 - AluJo SINE Alu -5 307 1 346 320 8 40 chr17 1618778 1618903 -83819577 + MIR3 SINE MIR 41 161 -47 2261 109 10 3 chr17 1618946 1619250 -83819230 + AluSx SINE Alu 1 306 -6 316 125 0 0 chr17 1619667 1619723 -83818757 - Alu SINE Alu 0 301 246 351 284 24 16 chr17 1619915 1620042 -83818438 - MLT1L LTR MaLR -2 613 486 314 54 0 0 chr17 1620246 1620283 -83818197 + U2 snRNA snRNA 1 37 -151 2146 97 18 0 chr17 1620362 1620661 -83817819 + AluY SINE Alu 1 284 -27 190 0 0 0 chr17 1620486 1620707 -83817773 + (CA)n Simple_repeat Simple_repeat 2 222 0 1825 114 11 7 chr17 1620707 1620988 -83817492 + AluSq SINE Alu 1 282 -31 757 122 28 0 chr17 1621034 1621141 -83817339 - FLAM_C SINE Alu -32 111 2 710 249 152 91 chr17 1621384 1621866 -83816614 - MLT1H LTR MaLR 0 549 39 1135 147 0 0 chr17 1621882 1622059 -83816421 + AluSg/x SINE Alu 136 312 0 826 78 5 63 chr17 1622479 1622670 -83815810 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 2065 125 3 0 chr17 1622670 1623005 -83815475 - AluSp SINE Alu 0 336 1 24 0 0 0 chr17 1623141 1623165 -83815315 + AT_rich Low_complexity Low_complexity 1 24 0 1964 129 3 10 chr17 1623235 1623530 -83814950 - AluSx SINE Alu -19 293 1 1747 141 7 11 chr17 1623619 1623931 -83814549 - AluSg SINE Alu 0 311 1 675 167 0 111 chr17 1623931 1623943 -83814537 - AluJo SINE Alu -167 145 133 1873 138 0 7 chr17 1623943 1624240 -83814240 - AluSq SINE Alu -18 295 1 675 167 0 111 chr17 1624240 1624389 -83814091 - AluJo SINE Alu -179 133 2 320 314 95 57 chr17 1624932 1625228 -83813252 + L2 LINE L2 2449 2755 -559 392 171 49 12 chr17 1625240 1625322 -83813158 - MIR SINE MIR -5 257 173 316 271 0 24 chr17 1625351 1625436 -83813044 - MIR SINE MIR -178 84 2 1091 314 31 110 chr17 1625665 1625837 -83812643 - AluJo SINE Alu -9 293 156 2245 94 0 3 chr17 1625837 1626135 -83812345 + AluSq SINE Alu 1 297 -16 1091 314 31 110 chr17 1626135 1626280 -83812200 - AluJo SINE Alu -146 156 1 1854 107 21 24 chr17 1626848 1627137 -83811343 + AluSx SINE Alu 2 289 -23 25 31 0 0 chr17 1627141 1627173 -83811307 + AT_rich Low_complexity Low_complexity 1 32 0 325 202 0 138 chr17 1627176 1627285 -83811195 + L1MC4 LINE L1 6615 6708 -1334 298 217 24 36 chr17 1627292 1627543 -83810937 + (TATATG)n Simple_repeat Simple_repeat 1 248 0 2324 87 3 0 chr17 1628551 1628863 -83809617 - AluSp SINE Alu 0 313 1 304 219 144 53 chr17 1629290 1629477 -83809003 - L1MC5 LINE L1 -182 7779 7576 23 0 0 0 chr17 1629502 1629525 -83808955 + AT_rich Low_complexity Low_complexity 1 23 0 1362 97 10 0 chr17 1629616 1629811 -83808669 - AluSp SINE Alu 0 313 117 249 368 34 8 chr17 1630009 1630051 -83808429 - L2 LINE L2 -237 3035 2996 1844 113 17 14 chr17 1630051 1630342 -83808138 + AluSx SINE Alu 1 292 -20 249 368 34 8 chr17 1630342 1630416 -83808064 - L2 LINE L2 -276 2996 2916 391 179 13 13 chr17 1631310 1631388 -83807092 + MIR SINE MIR 184 261 -1 430 340 32 6 chr17 1631597 1631753 -83806727 - MIR SINE MIR -75 187 28 1884 126 41 0 chr17 1631883 1632176 -83806304 - AluSq SINE Alu -8 305 1 2289 83 0 16 chr17 1632333 1632646 -83805834 - AluY SINE Alu -3 308 1 1909 128 3 13 chr17 1632691 1632997 -83805483 - AluSc SINE Alu -6 303 1 2030 135 3 6 chr17 1632997 1633308 -83805172 - AluSx SINE Alu -2 310 1 794 96 35 9 chr17 1633742 1633857 -83804623 + AluJb SINE Alu 1 118 -194 1031 141 0 70 chr17 1633879 1633990 -83804490 + Tigger6 DNA MER2_type 1423 1540 -57 2035 94 33 0 chr17 1633990 1634289 -83804191 + AluY SINE Alu 1 309 -2 2060 112 37 0 chr17 1634289 1634584 -83803896 + AluSg SINE Alu 1 306 -4 1031 141 0 70 chr17 1634584 1634656 -83803824 + Tigger6 DNA MER2_type 1538 1594 -3 * 1586 244 99 46 chr17 1634656 1635151 -83803329 - MLT2F LTR ERVL -98 565 45 444 299 62 17 chr17 1635187 1635364 -83803116 + MIR SINE MIR 1 185 -77 2219 96 3 0 chr17 1635393 1635705 -83802775 - AluSp SINE Alu 0 313 1 1851 152 3 10 chr17 1635849 1636158 -83802322 + AluJo SINE Alu 1 307 -5 298 287 10 30 chr17 1636195 1636296 -83802184 + MIR SINE MIR 98 196 -66 512 141 41 50 chr17 1636474 1636595 -83801885 + L1MC3 LINE L1 7665 7784 -1 808 153 79 95 chr17 1636615 1636736 -83801744 - MER5A DNA MER1_type -2 187 69 2097 100 3 0 chr17 1636736 1637026 -83801454 - AluSg SINE Alu -19 291 1 808 153 79 95 chr17 1637026 1637094 -83801386 - MER5A DNA MER1_type -120 69 1 205 190 52 0 chr17 1637359 1637417 -83801063 + (TA)n Simple_repeat Simple_repeat 1 61 0 1507 139 4 8 chr17 1637424 1637661 -83800819 + MER46A DNA MER2_type 1 236 0 1870 142 3 7 chr17 1637677 1637972 -83800508 + AluJb SINE Alu 1 294 -18 24 0 0 0 chr17 1637972 1637996 -83800484 + AT_rich Low_complexity Low_complexity 1 24 0 816 189 9 108 chr17 1638113 1638266 -83800214 - L1M3 LINE L1 -541 5639 5472 755 208 0 0 chr17 1638266 1638396 -83800084 - FLAM_C SINE Alu -2 131 2 2064 125 0 3 chr17 1638402 1638706 -83799774 - AluSq SINE Alu -10 303 1 1939 141 0 13 chr17 1638707 1639052 -83799428 - AluSx SINE Alu 0 312 8 816 189 9 108 chr17 1639052 1639101 -83799379 - L1M3 LINE L1 -712 5468 5449 1622 173 3 14 chr17 1639336 1639631 -83798849 + AluJo SINE Alu 3 294 -18 536 264 8 8 chr17 1639643 1639772 -83798708 - L2 LINE L2 -3 3310 3182 1407 246 28 39 chr17 1639841 1640203 -83798277 + MLT1J LTR MaLR 3 360 -151 1306 193 30 43 chr17 1640212 1640513 -83797967 + AluJo SINE Alu 12 308 -4 199 109 0 43 chr17 1640525 1640571 -83797909 + (GAA)n Simple_repeat Simple_repeat 2 45 0 719 105 0 0 chr17 1640613 1640708 -83797772 - 7SLRNA srpRNA srpRNA -11 309 215 2309 90 6 0 chr17 1640708 1641019 -83797461 - AluSp SINE Alu 0 313 1 1614 111 4 0 chr17 1641019 1641244 -83797236 - 7SLRNA srpRNA srpRNA -93 227 1 266 253 0 13 chr17 1641249 1641324 -83797156 + MLT1J LTR MaLR 412 485 -26 229 268 237 0 chr17 1641384 1641481 -83796999 - L2 LINE L2 -223 3049 2930 977 90 0 8 chr17 1641586 1641720 -83796760 - AluSq/x SINE Alu -179 133 1 1551 173 3 26 chr17 1642512 1642648 -83795832 + AluJo SINE Alu 1 139 -173 2110 109 3 0 chr17 1642648 1642942 -83795538 + AluSg SINE Alu 1 295 -15 2377 59 3 13 chr17 1642944 1643251 -83795229 + AluY SINE Alu 1 304 -7 1551 173 3 26 chr17 1643251 1643418 -83795062 + AluJo SINE Alu 140 300 -12 2213 84 3 3 chr17 1643460 1643757 -83794723 + AluSq SINE Alu 1 297 -16 1426 176 97 38 chr17 1644034 1644374 -83794106 + LTR2B LTR ERV1 32 391 -99 867 45 0 0 chr17 1644392 1644502 -83793978 - SVA Other Other -1 1385 1276 563 136 2 0 chr17 1644504 1644598 -83793882 + LTR2B LTR ERV1 355 490 0 1073 151 0 0 chr17 1644599 1644765 -83793715 - AluSg/x SINE Alu -13 297 132 1520 93 9 0 chr17 1644765 1644979 -83793501 - AluSq SINE Alu -11 302 87 1003 167 0 22 chr17 1645082 1645262 -83793218 + AluSg/x SINE Alu 119 294 -16 1767 168 3 0 chr17 1645323 1645621 -83792859 - AluJb SINE Alu -13 299 1 338 287 103 51 chr17 1645621 1645952 -83792528 + HAL1 LINE L1 25 372 -2135 1933 123 0 16 chr17 1645955 1646264 -83792216 + AluSc SINE Alu 1 304 -5 430 284 83 33 chr17 1646265 1646583 -83791897 + L1MC/D LINE L1 5386 5714 -448 2073 79 7 4 chr17 1646714 1647028 -83791452 + AluSx SINE Alu 1 315 0 233 151 0 38 chr17 1647112 1647140 -83791340 + A-rich Low_complexity Low_complexity 5 32 -23 2296 86 3 3 chr17 1647140 1647453 -83791027 + AluSq SINE Alu 1 313 0 233 151 0 38 chr17 1647453 1647477 -83791003 + A-rich Low_complexity Low_complexity 32 55 0 415 327 35 39 chr17 1647698 1647952 -83790528 + L1M4 LINE L1 4582 4834 -1312 2075 124 0 6 chr17 1647997 1648311 -83790169 + AluSx SINE Alu 1 312 0 1257 102 0 0 chr17 1648311 1648478 -83790002 + AluSq SINE Alu 133 299 -14 974 174 11 16 chr17 1648601 1648791 -83789689 + AluJo SINE Alu 92 280 -32 614 325 13 21 chr17 1648811 1649045 -83789435 + MIR SINE MIR 31 262 0 612 215 23 8 chr17 1649229 1649359 -83789121 - AluSg/x SINE Alu -17 295 164 1263 113 5 5 chr17 1649361 1649547 -83788933 - AluSg/x SINE Alu -8 302 117 2018 119 10 10 chr17 1649663 1649965 -83788515 - AluSx SINE Alu -10 302 1 912 133 20 137 chr17 1650025 1650280 -83788200 + AluJb SINE Alu 87 311 -1 395 129 48 0 chr17 1650600 1650662 -83787818 - AluS SINE Alu -12 289 225 681 158 0 0 chr17 1650662 1650763 -83787717 - AluS SINE Alu -212 101 1 8118 127 143 38 chr17 1650812 1652367 -83786113 - pTR5 LTR ERV1 0 2438 589 999 94 0 0 chr17 1652497 1652624 -83785856 - FLAM_C SINE Alu -6 127 1 272 274 0 0 chr17 1652716 1652778 -83785702 - MIR3 SINE MIR -33 175 114 395 218 118 9 chr17 1652784 1652894 -83785586 - L1M4 LINE L1 -2553 3593 3472 1195 131 4 79 chr17 1653038 1653267 -83785213 + AluSx SINE Alu 1 212 -100 1007 104 0 146 chr17 1653367 1653579 -83784901 + AluJb SINE Alu 125 305 -7 517 348 146 29 chr17 1653588 1654274 -83784206 - L2 LINE L2 -727 2587 1822 1640 152 14 18 chr17 1654274 1654589 -83783891 + AluJo SINE Alu 1 314 0 1529 177 29 35 chr17 1654646 1654827 -83783653 + L1MB2 LINE L1 5651 5832 -339 2167 81 0 37 chr17 1654827 1655150 -83783330 + AluSx SINE Alu 1 311 -1 1529 177 29 35 chr17 1655150 1655395 -83783085 + L1MB2 LINE L1 5832 6171 0 622 164 95 0 chr17 1655667 1655783 -83782697 - FLAM_C SINE Alu 0 143 17 1200 103 0 0 chr17 1655925 1656090 -83782390 + AluSq SINE Alu 1 165 -148 1413 77 31 15 chr17 1656106 1656302 -83782178 + AluSg/x SINE Alu 99 297 -13 377 260 46 51 chr17 1656412 1656608 -83781872 + L1MC4a LINE L1 5711 5905 -1903 2381 66 0 0 chr17 1658146 1658449 -83780031 + AluY SINE Alu 1 303 -8 22 0 0 0 chr17 1658453 1658475 -83780005 + AT_rich Low_complexity Low_complexity 1 22 0 2401 42 0 0 chr17 1658482 1658788 -83779692 + AluY SINE Alu 1 306 0 263 273 68 45 chr17 1659052 1659162 -83779318 - MIR SINE MIR -78 184 69 2145 94 0 25 chr17 1659162 1659480 -83779000 + AluSg SINE Alu 1 310 0 263 273 68 45 chr17 1659480 1659501 -83778979 - MIR SINE MIR -193 69 50 378 183 16 0 chr17 1659765 1659850 -83778630 - L1P3 LINE L1 -402 5752 5664 442 188 20 2 chr17 1659866 1660117 -83778363 + AluJo SINE Alu 1 295 -17 636 250 152 62 chr17 1660364 1660520 -83777960 + Charlie8 DNA MER1_type 63 204 -2213 691 179 0 15 chr17 1660520 1660654 -83777826 - FLAM_C SINE Alu 0 133 2 636 250 152 62 chr17 1660654 1660865 -83777615 + Charlie8 DNA MER1_type 204 463 -1954 2312 55 3 0 chr17 1660865 1661155 -83777325 - AluSg SINE Alu -19 291 1 1743 161 3 0 chr17 1661184 1661469 -83777011 - AluSx SINE Alu -26 286 1 1243 88 83 6 chr17 1661875 1662056 -83776424 + MER30 DNA MER1_type 1 195 -35 2274 99 0 16 chr17 1662533 1662846 -83775634 + AluSg SINE Alu 1 308 -2 2077 94 17 14 chr17 1663556 1663853 -83774627 - AluSx SINE Alu -14 298 1 193 263 0 0 chr17 1663855 1663893 -83774587 - MIR SINE MIR -78 184 147 318 219 113 86 chr17 1663928 1663966 -83774514 + MER58B DNA MER1_type 4 40 -301 1495 159 21 10 chr17 1663966 1664255 -83774225 - AluJb SINE Alu -20 292 1 318 219 113 86 chr17 1664255 1664367 -83774113 + MER58B DNA MER1_type 40 158 -183 28 29 0 0 chr17 1664371 1664406 -83774074 + AT_rich Low_complexity Low_complexity 1 35 0 298 85 85 0 chr17 1664408 1664455 -83774025 + MER58B DNA MER1_type 150 200 -141 180 0 0 0 chr17 1664495 1664515 -83773965 + (TTTTTG)n Simple_repeat Simple_repeat 4 23 0 21 36 0 0 chr17 1665336 1665364 -83773116 + AT_rich Low_complexity Low_complexity 1 28 0 1620 143 24 14 chr17 1665367 1665654 -83772826 - AluJo SINE Alu -9 303 14 525 173 136 0 chr17 1665675 1665785 -83772695 + MER58B DNA MER1_type 217 341 0 1222 192 4 54 chr17 1665951 1666211 -83772269 - AluJo SINE Alu -43 269 23 1739 115 64 3 chr17 1666336 1666632 -83771848 - MER2 DNA MER2_type 0 345 32 2155 103 0 0 chr17 1666784 1667084 -83771396 - AluSg SINE Alu -10 300 1 2166 154 26 48 chr17 1667650 1668065 -83770415 - MLT2D LTR ERVL -8 406 1 2305 53 0 33 chr17 1668127 1668427 -83770053 + AluY SINE Alu 1 290 -21 1830 120 0 37 chr17 1668981 1669280 -83769200 + AluSx SINE Alu 1 288 -24 2078 97 0 7 chr17 1669312 1669601 -83768879 + AluSg SINE Alu 1 287 -23 560 178 0 0 chr17 1669940 1670041 -83768439 + AluSg/x SINE Alu 201 301 -8 2263 85 3 13 chr17 1670307 1670614 -83767866 + AluSx SINE Alu 1 312 0 1593 169 3 3 chr17 1671356 1671646 -83766834 - AluJb SINE Alu -22 290 1 1314 189 13 60 chr17 1671648 1671807 -83766673 - AluJo SINE Alu -14 288 148 1987 125 7 7 chr17 1671807 1672112 -83766368 - AluSx SINE Alu -7 305 1 1314 189 13 60 chr17 1672112 1672253 -83766227 - AluJo SINE Alu -154 148 2 544 126 0 172 chr17 1672265 1672416 -83766064 - FLAM_C SINE Alu -7 126 2 374 247 96 48 chr17 1672504 1672670 -83765810 - MIR SINE MIR -48 214 41 2355 70 0 6 chr17 1672899 1673212 -83765268 + AluY SINE Alu 1 311 0 1394 57 0 0 chr17 1673212 1673388 -83765092 + AluSg/x SINE Alu 132 307 -2 23 33 0 0 chr17 1674050 1674080 -83764400 + GC_rich Low_complexity Low_complexity 1 30 0 252 0 0 0 chr17 1674141 1674169 -83764311 + (CGG)n Simple_repeat Simple_repeat 2 29 0 285 102 51 0 chr17 1674438 1674497 -83763983 + CT-rich Low_complexity Low_complexity 1 62 0 237 200 31 15 chr17 1674656 1674721 -83763759 + CT-rich Low_complexity Low_complexity 2 67 0 26 0 0 0 chr17 1676709 1676735 -83761745 + AT_rich Low_complexity Low_complexity 1 26 0 623 284 72 32 chr17 1676793 1677031 -83761449 - MIR SINE MIR -1 261 18 694 240 147 62 chr17 1677252 1677444 -83761036 + MLT1H LTR MaLR 30 204 -345 2029 88 13 42 chr17 1677444 1677751 -83760729 + AluSq SINE Alu 1 298 -15 694 240 147 62 chr17 1677751 1677988 -83760492 + MLT1H LTR MaLR 204 533 -16 2457 54 0 0 chr17 1678143 1678441 -83760039 - AluSx SINE Alu -14 298 1 570 253 112 0 chr17 1679699 1679877 -83758603 - L2 LINE L2 -5 3308 3111 1000 199 23 14 chr17 1679880 1680096 -83758384 + AluJo SINE Alu 87 304 -8 966 151 37 55 chr17 1680392 1680610 -83757870 + L1MA4A LINE L1 6086 6299 -4 1374 126 36 138 chr17 1680665 1680830 -83757650 - AluJo SINE Alu 0 302 187 1914 103 3 72 chr17 1680830 1681150 -83757330 - AluSx SINE Alu -14 298 1 1374 126 36 138 chr17 1681150 1681318 -83757162 - AluJo SINE Alu -115 187 3 781 311 138 26 chr17 1681797 1682456 -83756024 - L2 LINE L2 -339 2975 2243 6453 65 13 41 chr17 1682619 1683595 -83754885 - SVA Other Other -5 1381 433 5414 72 24 15 chr17 1683639 1684436 -83754044 - SVA Other Other -518 868 65 225 143 54 18 chr17 1684549 1684605 -83753875 - L1M4 LINE L1 -382 5802 5745 353 231 132 52 chr17 1684609 1684836 -83753644 - L1MB7 LINE L1 -317 5867 5658 334 251 110 64 chr17 1684824 1685043 -83753437 - L1MB7 LINE L1 -314 5870 5642 * 2297 163 38 57 chr17 1685051 1685574 -83752906 - L1MB4 LINE L1 -325 5855 5343 1997 86 3 58 chr17 1685653 1685966 -83752514 - AluSq SINE Alu -17 296 1 486 307 7 7 chr17 1686220 1686357 -83752123 + MIR3 SINE MIR 47 183 -25 2262 95 0 0 chr17 1686481 1686777 -83751703 - AluSg SINE Alu -14 296 1 1267 216 36 16 chr17 1686897 1687202 -83751278 - AluJo SINE Alu -1 311 1 2088 114 19 0 chr17 1687212 1687519 -83750961 - AluSq SINE Alu 0 313 1 2240 92 0 16 chr17 1687773 1688088 -83750392 + AluSx SINE Alu 1 310 -2 1626 155 4 4 chr17 1688335 1688599 -83749881 + AluSx SINE Alu 35 298 -14 22 0 0 0 chr17 1688681 1688703 -83749777 + AT_rich Low_complexity Low_complexity 1 22 0 710 203 16 0 chr17 1688892 1689020 -83749460 + FLAM_A SINE Alu 4 133 0 480 316 163 37 chr17 1689075 1689565 -83748915 - L2 LINE L2 -2 3270 2736 277 192 0 0 chr17 1689567 1689619 -83748861 + Alu SINE Alu 247 298 -2 2518 170 62 18 chr17 1690209 1690245 -83748235 - L1MB2 LINE L1 -8 6163 6130 2226 131 129 8 chr17 1690245 1690626 -83747854 - MSTA LTR MaLR 0 428 2 2518 170 62 18 chr17 1690626 1691102 -83747378 - L1MB2 LINE L1 -41 6130 5628 1133 114 0 0 chr17 1691203 1691361 -83747119 + AluSg/x SINE Alu 138 295 -17 336 205 24 36 chr17 1691367 1691450 -83747030 - MER94 DNA DNA -52 82 1 790 303 69 69 chr17 1691461 1691970 -83746510 + L2 LINE L2 2804 3312 -1 3070 140 39 14 chr17 1692138 1692652 -83745828 - MER1A DNA MER1_type 0 527 1 277 303 8 53 chr17 1692705 1692837 -83745643 + Charlie8 DNA MER1_type 89 214 -2203 2013 125 3 0 chr17 1692846 1693142 -83745338 + AluSq SINE Alu 3 299 -14 234 257 68 14 chr17 1693191 1693265 -83745215 + MER5C DNA MER1_type 2 79 -245 368 252 121 89 chr17 1694359 1694700 -83743780 - L1M4 LINE L1 -2724 3422 2137 21 0 0 0 chr17 1694701 1694722 -83743758 + AT_rich Low_complexity Low_complexity 1 21 0 1647 141 21 34 chr17 1694722 1695013 -83743467 - AluJo SINE Alu -25 287 1 1036 277 125 49 chr17 1695083 1695270 -83743210 - HAL1b LINE L1 -463 885 714 886 163 141 0 chr17 1695270 1695454 -83743026 + MER6B DNA MER2_type 1 210 0 1036 277 125 49 chr17 1695454 1696002 -83742478 - HAL1b LINE L1 -634 714 94 437 187 122 0 chr17 1696035 1696142 -83742338 - L1MB7 LINE L1 -16 6168 6049 1865 214 156 63 chr17 1696191 1696396 -83742084 - L1MC4 LINE L1 -602 7440 7255 1673 171 0 28 chr17 1696396 1696717 -83741763 - AluSx SINE Alu 0 312 1 1865 214 156 63 chr17 1696717 1697166 -83741314 - L1MC4 LINE L1 -787 7255 6725 2254 103 3 0 chr17 1697422 1697733 -83740747 - AluSx SINE Alu 0 312 1 445 269 65 9 chr17 1697736 1697844 -83740636 - MIR SINE MIR -61 147 34 1282 189 23 36 chr17 1698167 1698493 -83739987 + AluJb SINE Alu 1 312 0 2454 188 75 30 chr17 1698588 1699162 -83739318 + L1MB7 LINE L1 5585 6184 0 543 319 87 0 chr17 1699311 1699526 -83738954 - MIR SINE MIR 0 262 24 1194 166 67 9 chr17 1700071 1700294 -83738186 + MER46A DNA MER2_type 1 236 0 21 0 0 0 chr17 1700431 1700452 -83738028 + AT_rich Low_complexity Low_complexity 1 21 0 815 112 72 0 chr17 1700452 1700577 -83737903 - AluJo SINE Alu -177 135 2 2192 107 0 0 chr17 1700666 1700964 -83737516 - AluSq SINE Alu -15 298 1 808 291 160 38 chr17 1701043 1701682 -83736798 + L2 LINE L2 1931 2647 -667 207 0 0 0 chr17 1702707 1702730 -83735750 + (GA)n Simple_repeat Simple_repeat 2 24 0 1924 89 23 0 chr17 1702735 1702994 -83735486 - AluSq SINE Alu -48 265 1 240 86 0 0 chr17 1703230 1703265 -83735215 + (T)n Simple_repeat Simple_repeat 1 35 0 1076 141 0 6 chr17 1703715 1703885 -83734595 + AluJb SINE Alu 117 285 -27 189 107 0 0 chr17 1704345 1704373 -83734107 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 512 133 0 0 chr17 1704373 1704456 -83734024 - L1M4b LINE L1 -6687 172 90 5332 142 25 66 chr17 1704467 1705510 -83732970 - L1MC1 LINE L1 -10 6323 5324 1898 155 0 0 chr17 1705510 1705806 -83732674 - AluSq SINE Alu -17 296 1 2322 72 7 0 chr17 1705826 1706130 -83732350 - AluY SINE Alu -5 306 1 237 245 0 0 chr17 1706326 1706379 -83732101 - MLT1F LTR MaLR 0 542 490 2061 122 0 10 chr17 1706383 1706694 -83731786 - AluSx SINE Alu -3 309 2 1482 200 3 27 chr17 1706749 1707049 -83731431 - AluJo SINE Alu -19 293 1 1138 245 50 7 chr17 1707049 1707324 -83731156 - MLT1F LTR MaLR -41 501 212 436 215 0 0 chr17 1707315 1707394 -83731086 - MLT1F LTR MaLR -472 95 17 * 1699 172 89 3 chr17 1707394 1707708 -83730772 - MER7A DNA MER2_type 0 346 8 2157 101 0 7 chr17 1707922 1708219 -83730261 + AluSg SINE Alu 1 295 -15 26 50 0 0 chr17 1708260 1708300 -83730180 + AT_rich Low_complexity Low_complexity 1 40 0 534 223 9 18 chr17 1708300 1708412 -83730068 - FLAM_A SINE Alu -27 115 5 286 122 37 183 chr17 1708463 1708545 -83729935 - MER2 DNA MER2_type -3 342 273 1600 150 36 39 chr17 1708549 1708856 -83729624 + AluJb SINE Alu 7 312 0 864 186 69 0 chr17 1708885 1709073 -83729407 - MER2 DNA MER2_type -136 209 9 384 310 76 25 chr17 1709085 1709282 -83729198 - MLT1K LTR MaLR -34 554 348 2190 106 0 7 chr17 1709435 1709738 -83728742 - AluSx SINE Alu -11 301 1 1500 144 0 32 chr17 1709786 1710064 -83728416 - AluSx SINE Alu -33 279 11 2230 83 0 16 chr17 1710086 1710398 -83728082 - AluY SINE Alu -4 307 1 1858 157 23 17 chr17 1710401 1710926 -83727554 - L1M4 LINE L1 -692 5486 4958 1743 110 27 40 chr17 1711523 1711823 -83726657 - AluSq SINE Alu -17 296 1 1925 131 0 19 chr17 1711908 1712222 -83726258 + AluSg SINE Alu 1 308 -2 2559 169 61 21 chr17 1712803 1712839 -83725641 - L1MB2 LINE L1 -8 6163 6130 2137 130 128 16 chr17 1712839 1713223 -83725257 - MSTA LTR MaLR 0 428 2 2559 169 61 21 chr17 1713223 1713708 -83724772 - L1MB2 LINE L1 -41 6130 5621 2200 93 0 7 chr17 1713801 1714103 -83724377 + AluSx SINE Alu 1 300 -12 1606 143 0 44 chr17 1714286 1714611 -83723869 - AluSx SINE Alu 0 312 1 2283 89 0 3 chr17 1714777 1715080 -83723400 - AluSp SINE Alu -11 302 1 2060 97 3 7 chr17 1715677 1715967 -83722513 - AluSp SINE Alu -24 289 1 235 234 206 28 chr17 1716316 1716423 -83722057 - MIR SINE MIR -66 142 17 2060 127 3 0 chr17 1716586 1716885 -83721595 + AluJb SINE Alu 3 302 -10 243 61 0 0 chr17 1716950 1716983 -83721497 + (TG)n Simple_repeat Simple_repeat 2 34 0 1472 173 0 14 chr17 1716983 1717261 -83721219 - AluSx SINE Alu -34 278 5 24 0 0 0 chr17 1717270 1717294 -83721186 + AT_rich Low_complexity Low_complexity 1 24 0 1689 188 0 0 chr17 1717516 1717803 -83720677 + AluJb SINE Alu 1 287 -25 263 186 129 0 chr17 1717854 1717924 -83720556 + MIR SINE MIR 125 203 -59 2153 93 0 17 chr17 1717971 1718272 -83720208 - AluSx SINE Alu -16 296 1 2349 54 0 22 chr17 1718334 1718647 -83719833 - AluY SINE Alu -5 306 1 830 180 56 11 chr17 1718739 1718917 -83719563 + AluSg/x SINE Alu 121 306 -6 1533 159 29 14 chr17 1718934 1719211 -83719269 + AluJo SINE Alu 3 283 -29 194 0 0 37 chr17 1719692 1719719 -83718761 + (TTAA)n Simple_repeat Simple_repeat 3 28 0 1667 164 0 17 chr17 1719719 1720009 -83718471 - AluJb SINE Alu -25 287 1 2211 90 7 3 chr17 1720321 1720621 -83717859 + AluSx SINE Alu 1 301 -11 1115 121 0 6 chr17 1720625 1720791 -83717689 + AluSg/x SINE Alu 138 302 -10 1996 119 3 10 chr17 1720846 1721149 -83717331 + AluSx SINE Alu 1 301 -11 1746 214 107 137 chr17 1721472 1722567 -83715913 + L1MC4 LINE L1 6698 7820 -222 1951 118 3 19 chr17 1722567 1722880 -83715600 + AluSx SINE Alu 5 312 0 1746 214 107 137 chr17 1722880 1723094 -83715386 + L1MC4 LINE L1 7820 8039 -3 1925 133 31 0 chr17 1723573 1723866 -83714614 - AluJb SINE Alu -10 302 1 1937 120 7 13 chr17 1724082 1724391 -83714089 - AluSx SINE Alu -2 310 4 2294 225 130 15 chr17 1725191 1726021 -83712459 - L1ME1 LINE L1 -40 6195 5238 603 217 80 6 chr17 1726037 1726212 -83712268 - L1ME1 LINE L1 -1278 4937 4750 812 164 0 0 chr17 1726232 1726360 -83712120 + FLAM_C SINE Alu 1 128 -15 1089 193 162 9 chr17 1726361 1726682 -83711798 - L1ME1 LINE L1 -1459 4756 4387 1756 73 0 0 chr17 1726694 1726914 -83711566 - AluSc SINE Alu -10 299 80 322 91 0 45 chr17 1726914 1726980 -83711500 + (T)n Simple_repeat Simple_repeat 1 63 0 5775 52 10 24 chr17 1726980 1727786 -83710694 - SVA Other Other 0 1386 592 1199 82 27 50 chr17 1727857 1728283 -83710197 - SVA Other Other -520 866 635 4554 87 60 59 chr17 1728312 1729128 -83709352 - SVA Other Other -520 866 50 297 0 0 0 chr17 1729134 1729167 -83709313 + (GGGAGA)n Simple_repeat Simple_repeat 5 37 0 645 144 0 0 chr17 1729167 1729257 -83709223 - AluSc SINE Alu -218 91 2 2027 190 21 104 chr17 1729262 1729915 -83708565 - L1ME1 LINE L1 -1818 4397 3799 30 0 0 0 chr17 1729934 1729964 -83708516 + AT_rich Low_complexity Low_complexity 1 30 0 2018 125 0 3 chr17 1729964 1730253 -83708227 - AluSx SINE Alu -18 294 7 333 108 15 0 chr17 1730279 1730344 -83708136 - L1MA7 LINE L1 0 6291 6226 1146 150 120 45 chr17 1730344 1730611 -83707869 - MER7C DNA MER2_type 0 603 317 919 110 0 15 chr17 1730613 1730749 -83707731 + AluY SINE Alu 1 134 -177 1916 111 0 20 chr17 1730749 1731055 -83707425 + AluSx SINE Alu 1 300 -12 1824 153 32 29 chr17 1731055 1731281 -83707199 - MER7C DNA MER2_type -2714 314 84 1651 119 60 11 chr17 1731281 1731588 -83706892 - AluSx SINE Alu 0 320 1 1824 153 32 29 chr17 1731588 1731673 -83706807 - MER7C DNA MER2_type -2944 84 1 1031 150 79 22 chr17 1731673 1731900 -83706580 - L1MA7 LINE L1 -64 6227 5988 781 197 31 44 chr17 1731901 1731975 -83706505 - L1ME1 LINE L1 -2403 3812 3739 2067 89 0 48 chr17 1731975 1732291 -83706189 + AluY SINE Alu 1 301 -10 781 197 31 44 chr17 1732291 1732444 -83706036 - L1ME1 LINE L1 -2476 3739 3588 1787 106 66 15 chr17 1732510 1732783 -83705697 + AluSg SINE Alu 7 293 -17 954 161 12 0 chr17 1732783 1732945 -83705535 + AluSg/x SINE Alu 134 297 -15 660 219 85 83 chr17 1732945 1733320 -83705160 - L1ME1 LINE L1 -2685 3530 3155 * 700 313 53 22 chr17 1733312 1733635 -83704845 - L1ME1 LINE L1 -6033 363 31 180 0 0 0 chr17 1734003 1734023 -83704457 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 1725 196 56 39 chr17 1734332 1734746 -83703734 - L1PB4 LINE L1 -3 6153 5733 1825 153 7 7 chr17 1734757 1735098 -83703382 - AluJo SINE Alu 0 345 5 266 176 0 27 chr17 1735130 1735204 -83703276 - L1PB4 LINE L1 -1101 5045 4974 1134 202 4 50 chr17 1735210 1735244 -83703236 - AluJo SINE Alu -10 302 268 2304 65 0 3 chr17 1735244 1735537 -83702943 + AluSc SINE Alu 1 292 -17 1134 202 4 50 chr17 1735537 1735760 -83702720 - AluJo SINE Alu -44 268 57 811 151 8 8 chr17 1735760 1735886 -83702594 - FLAM_C SINE Alu -16 127 2 22 35 0 0 chr17 1735991 1736020 -83702460 + AT_rich Low_complexity Low_complexity 1 29 0 31 0 0 0 chr17 1736137 1736168 -83702312 + AT_rich Low_complexity Low_complexity 1 31 0 208 352 46 0 chr17 1736184 1736292 -83702188 - MIR3 SINE MIR -52 156 44 1548 166 0 27 chr17 1736383 1736679 -83701801 + AluJo SINE Alu 1 288 -24 2110 84 30 7 chr17 1737005 1737302 -83701178 + AluSx SINE Alu 1 304 -8 2050 126 7 0 chr17 1737954 1738263 -83700217 + AluSx SINE Alu 1 311 -1 1761 131 0 45 chr17 1738625 1738937 -83699543 + AluJb SINE Alu 3 300 -12 1757 109 6 61 chr17 1741322 1741634 -83696846 + AluSx SINE Alu 1 295 -17 195 306 0 48 chr17 1742230 1742292 -83696188 - MIR SINE MIR -194 68 10 678 159 102 68 chr17 1742892 1743068 -83695412 + MIR SINE MIR 81 262 0 557 104 104 0 chr17 1743170 1743266 -83695214 + MER85 DNA T2_type 1 106 -33 1589 165 7 23 chr17 1743267 1743570 -83694910 - AluJb SINE Alu -14 298 1 2009 100 0 32 chr17 1743607 1743916 -83694564 + AluY SINE Alu 1 299 -12 1372 203 120 49 chr17 1744134 1744619 -83693861 + L1ME3A LINE L1 5362 5881 -289 1942 124 0 10 chr17 1744620 1744911 -83693569 + AluSq SINE Alu 1 288 -25 30 0 0 0 chr17 1744911 1744941 -83693539 + AT_rich Low_complexity Low_complexity 1 30 0 22 56 0 0 chr17 1745113 1745149 -83693331 + AT_rich Low_complexity Low_complexity 1 36 0 2390 38 0 19 chr17 1745152 1745465 -83693015 + AluY SINE Alu 1 307 -4 1141 153 16 0 chr17 1745573 1745756 -83692724 + AluJo SINE Alu 110 295 -17 2080 75 0 24 chr17 1745770 1746065 -83692415 + AluSx SINE Alu 11 298 -14 1335 163 19 141 chr17 1746070 1746390 -83692090 - L1MC5 LINE L1 -628 7333 6976 2053 97 35 0 chr17 1746390 1746679 -83691801 + AluSx SINE Alu 1 299 -13 1335 163 19 141 chr17 1746679 1746727 -83691753 - L1MC5 LINE L1 -985 6976 7016 2247 91 3 3 chr17 1746727 1747035 -83691445 + AluSp SINE Alu 5 312 -1 1335 163 19 141 chr17 1747035 1747077 -83691403 - L1MC5 LINE L1 -944 7017 6972 912 101 0 43 chr17 1747128 1747266 -83691214 - FLAM_C SINE Alu 0 133 2 351 0 0 0 chr17 1747278 1747317 -83691163 + (TA)n Simple_repeat Simple_repeat 1 39 0 852 55 0 0 chr17 1747324 1747434 -83691046 - AluYa5/8 SINE Alu 0 310 201 861 254 74 32 chr17 1747449 1747760 -83690720 - L1MC4 LINE L1 -1018 7024 6701 282 206 0 0 chr17 1747800 1747863 -83690617 + CT-rich Low_complexity Low_complexity 5 67 0 924 143 0 26 chr17 1747896 1748050 -83690430 - AluJb SINE Alu -161 151 2 790 150 0 16 chr17 1748148 1748275 -83690205 + FLAM_A SINE Alu 8 132 -10 313 253 82 77 chr17 1748652 1748725 -83689755 - L1MC4a LINE L1 -1754 6054 5983 1688 142 0 41 chr17 1748725 1749041 -83689439 - AluSx SINE Alu -9 303 1 313 253 82 77 chr17 1749041 1749135 -83689345 - L1MC4a LINE L1 -1825 5983 5883 2171 102 0 10 chr17 1749135 1749448 -83689032 - AluSg SINE Alu 0 310 1 313 253 82 77 chr17 1749448 1749461 -83689019 - L1MC4a LINE L1 -1925 5883 5872 647 216 0 24 chr17 1749541 1749666 -83688814 + FLAM_A SINE Alu 1 122 -11 1396 151 0 4 chr17 1749996 1750221 -83688259 + AluJb SINE Alu 84 307 -5 189 0 0 0 chr17 1750272 1750293 -83688187 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 2183 94 0 3 chr17 1750941 1751238 -83687242 - AluY SINE Alu -15 296 1 402 204 0 11 chr17 1751359 1751447 -83687033 + AluJ/FLAM SINE Alu 6 92 -220 2461 0 0 14 chr17 1751494 1751823 -83686657 + AluYa5 SINE Alu 1 325 0 378 0 0 0 chr17 1752609 1752651 -83685829 + (CA)n Simple_repeat Simple_repeat 2 43 0 1315 112 12 89 chr17 1752902 1753240 -83685240 - AluSx SINE Alu 0 312 1 1864 85 48 7 chr17 1753272 1753566 -83684914 + AluSc SINE Alu 1 305 0 1983 98 0 77 chr17 1753590 1753917 -83684563 - AluSq SINE Alu -10 303 2 192 312 33 44 chr17 1754423 1754539 -83683941 + MIR SINE MIR 15 129 -79 1286 219 0 7 chr17 1754589 1754872 -83683608 - AluJo SINE Alu -15 297 17 186 133 0 0 chr17 1755276 1755306 -83683174 + (T)n Simple_repeat Simple_repeat 1 30 0 1841 120 3 20 chr17 1757383 1757682 -83680798 - AluSq SINE Alu -19 294 1 243 0 0 0 chr17 1757767 1757794 -83680686 + (TG)n Simple_repeat Simple_repeat 2 28 0 436 254 135 44 chr17 1758144 1758396 -83680084 - L1ME4a LINE L1 -2 6119 5845 2095 88 20 7 chr17 1758633 1758938 -83679542 + AluSx SINE Alu 1 309 -3 319 255 98 72 chr17 1759886 1760039 -83678441 - L1ME4a LINE L1 -3 6118 5962 2263 83 0 13 chr17 1760221 1760534 -83677946 + AluSg SINE Alu 1 309 -1 255 230 23 69 chr17 1762001 1762088 -83676392 - MIR SINE MIR -133 129 47 2096 55 4 11 chr17 1762441 1762716 -83675764 + AluSx SINE Alu 1 273 -39 21 43 0 0 chr17 1762905 1762928 -83675552 + AT_rich Low_complexity Low_complexity 1 23 0 1941 102 10 14 chr17 1763435 1763730 -83674750 - AluSq SINE Alu -19 294 1 2049 92 3 22 chr17 1763842 1764158 -83674322 + AluSx SINE Alu 1 310 -2 532 287 14 0 chr17 1764164 1764307 -83674173 - Charlie8 DNA MER1_type -2196 221 77 1711 171 0 13 chr17 1764328 1764637 -83673843 + AluJb SINE Alu 1 305 -7 190 246 0 18 chr17 1764856 1764913 -83673567 - L3 LINE CR1 -377 1200 1145 2126 108 0 3 chr17 1765403 1765709 -83672771 - AluSc SINE Alu -4 305 1 2124 49 3 21 chr17 1765735 1766059 -83672421 - AluY SINE Alu 0 320 2 2099 85 10 7 chr17 1766084 1766379 -83672101 + AluSp SINE Alu 1 296 -17 621 165 0 10 chr17 1766415 1766518 -83671962 + FLAM_C SINE Alu 2 103 -40 2314 100 0 0 chr17 1766653 1766963 -83671517 - AluSx SINE Alu -2 310 1 2192 98 0 3 chr17 1766965 1767262 -83671218 - AluSq SINE Alu -17 296 1 302 231 29 19 chr17 1767523 1767627 -83670853 - MIR SINE MIR -77 131 27 613 56 0 0 chr17 1767734 1767827 -83670653 + AluSp/q SINE Alu 212 304 0 28 0 0 0 chr17 1767858 1767886 -83670594 + AT_rich Low_complexity Low_complexity 1 28 0 382 258 147 12 chr17 1767886 1768049 -83670431 + L1 LINE L1 3766 3950 -2196 2339 89 0 0 chr17 1768331 1768635 -83669845 - AluSg SINE Alu -6 304 1 2221 79 6 29 chr17 1768886 1769202 -83669278 - AluY SINE Alu -2 309 1 2141 150 70 20 chr17 1769202 1769601 -83668879 + L1MD1 LINE L1 5582 6000 -359 819 171 7 7 chr17 1769604 1769756 -83668724 + L1MD1 LINE L1 6084 6235 -7 1173 108 12 0 chr17 1769758 1769925 -83668555 - AluSq SINE Alu -15 298 130 2063 99 0 48 chr17 1770315 1770629 -83667851 - AluSq SINE Alu -14 299 1 292 208 24 112 chr17 1770668 1770793 -83667687 - L2 LINE L2 -936 2378 2265 183 167 0 0 chr17 1770801 1770831 -83667649 + MIR SINE MIR 92 121 -141 615 282 81 26 chr17 1771040 1771274 -83667206 + Charlie8 DNA MER1_type 26 272 -2145 621 167 19 0 chr17 1771302 1771410 -83667070 - L1MB5 LINE L1 -6 6168 6059 1610 122 0 8 chr17 1771411 1771657 -83666823 - AluSx SINE Alu -10 302 59 1079 93 10 62 chr17 1771758 1771894 -83666586 - L1MC/D LINE L1 -892 5467 5342 2048 117 0 0 chr17 1771894 1772184 -83666296 - AluSx SINE Alu -22 290 1 1079 93 10 62 chr17 1772184 1772240 -83666240 - L1MC/D LINE L1 -1017 5342 5285 2841 159 28 47 chr17 1772248 1772850 -83665630 - L1MB7 LINE L1 0 6184 5594 277 182 36 0 chr17 1772850 1772905 -83665575 - L1M4 LINE L1 -534 5650 5594 265 295 0 0 chr17 1772901 1772962 -83665518 - L1M4 LINE L1 -530 5654 5594 * 330 206 7 0 chr17 1772945 1773018 -83665462 - L1M3 LINE L1 -510 5670 5595 339 223 30 5 chr17 1773021 1773143 -83665337 - L1M1 LINE L1 -510 5670 5582 * 926 218 14 45 chr17 1773118 1773338 -83665142 - L1M4 LINE L1 -506 5668 5456 863 71 0 0 chr17 1773438 1773536 -83664944 - AluSq/x SINE Alu -186 126 29 180 97 0 0 chr17 1774169 1774200 -83664280 + (TTTTA)n Simple_repeat Simple_repeat 2 32 0 1681 159 3 14 chr17 1774202 1774485 -83663995 - AluSx SINE Alu -30 282 3 427 94 0 0 chr17 1774602 1774666 -83663814 + Alu SINE Alu 236 299 -12 183 385 13 0 chr17 1774880 1774958 -83663522 - L2 LINE L2 -55 3258 3180 917 219 40 4 chr17 1775383 1775634 -83662846 - L1MB3 LINE L1 0 6183 5924 576 200 77 0 chr17 1775637 1775767 -83662713 - MER46A DNA MER2_type 0 236 97 1153 74 0 0 chr17 1775767 1775902 -83662578 + AluSq/x SINE Alu 1 135 -177 2277 116 3 0 chr17 1775902 1776204 -83662276 + AluSx SINE Alu 1 303 -9 592 162 0 0 chr17 1776204 1776303 -83662177 - MER46A DNA MER2_type -132 104 6 2026 98 0 4 chr17 1776429 1776684 -83661796 - AluSx SINE Alu -58 254 1 807 154 7 0 chr17 1776684 1776820 -83661660 + MLT1D LTR MaLR 367 503 -2 2158 97 49 3 chr17 1777262 1777550 -83660930 - AluSx SINE Alu -11 301 1 1447 97 181 30 chr17 1777815 1778114 -83660366 + THE1C LTR MaLR 7 350 -25 665 206 23 0 chr17 1778315 1778446 -83660034 + MER44D DNA MER2_type 600 605 0 275 278 17 17 chr17 1778446 1778561 -83659919 - L1M4 LINE L1 -2399 3747 3633 2564 81 0 7 chr17 1778580 1778890 -83659590 - AluSx SINE Alu -4 308 1 450 308 67 33 chr17 1779255 1779554 -83658926 + L1MC/D LINE L1 5493 5801 -320 373 210 0 27 chr17 1779555 1779662 -83658818 + AluS SINE Alu 2 84 -219 767 217 54 12 chr17 1780335 1780501 -83657979 - MER63A DNA MER1_type -37 173 1 23 0 0 0 chr17 1781401 1781424 -83657056 + AT_rich Low_complexity Low_complexity 1 23 0 1084 222 0 9 chr17 1781833 1782058 -83656422 - MER58A DNA MER1_type 0 224 2 228 185 11 179 chr17 1782067 1782215 -83656265 + MER113 DNA MER1_type? 1 114 -407 2349 91 13 3 chr17 1782215 1782524 -83655956 - AluSp SINE Alu 0 313 2 228 185 11 179 chr17 1782524 1782559 -83655921 + MER113 DNA MER1_type? 114 153 -368 1874 125 96 0 chr17 1784100 1784380 -83654100 - AluSx SINE Alu -5 307 1 201 74 0 0 chr17 1785068 1785095 -83653385 + (GGGTG)n Simple_repeat Simple_repeat 3 29 0 1147 307 60 73 chr17 1785389 1785596 -83652884 - L1M4 LINE L1 -2292 3854 3646 1474 88 206 88 chr17 1785596 1785868 -83652612 - AluSq SINE Alu -9 304 1 1147 307 60 73 chr17 1785868 1786423 -83652057 - L1M4 LINE L1 -2500 3646 3102 283 224 75 0 chr17 1786506 1786573 -83651907 - MIR SINE MIR -85 177 106 740 186 8 0 chr17 1786631 1786760 -83651720 - FLAM_C SINE Alu 0 133 4 337 308 28 41 chr17 1786767 1787085 -83651395 - L1M4 LINE L1 -3104 3042 2729 2023 142 17 0 chr17 1787169 1787458 -83651022 - AluJb SINE Alu -18 294 1 1058 284 83 11 chr17 1787464 1787907 -83650573 + L1MC/D LINE L1 5287 5761 -2047 1719 103 0 0 chr17 1787913 1788136 -83650344 - AluSg/x SINE Alu -1 311 89 477 130 0 0 chr17 1788236 1788305 -83650175 - AluS SINE Alu -243 70 2 837 228 92 13 chr17 1788353 1788581 -83649899 - MIR SINE MIR -1 261 16 196 196 0 54 chr17 1790307 1790419 -83648061 + G-rich Low_complexity Low_complexity 3 108 0 1894 75 0 17 chr17 1790605 1790846 -83647634 - AluSq SINE Alu -76 237 1 733 294 73 39 chr17 1790846 1791645 -83646835 - L1MEd LINE L1 -2867 3262 2437 426 275 72 4 chr17 1792192 1792428 -83646052 - L1MEd LINE L1 -3759 2370 2119 2184 123 7 13 chr17 1792442 1792752 -83645728 - AluSx SINE Alu -4 308 1 202 222 25 49 chr17 1792781 1792862 -83645618 + T-rich Low_complexity Low_complexity 2 80 0 252 339 87 32 chr17 1793185 1793326 -83645154 - HAL1b LINE L1 -702 646 487 2445 77 0 26 chr17 1793326 1793639 -83644841 - AluY SINE Alu -6 305 1 252 339 87 32 chr17 1793639 1793715 -83644765 - HAL1b LINE L1 -861 487 417 23 54 0 0 chr17 1793772 1793809 -83644671 + AT_rich Low_complexity Low_complexity 1 37 0 519 299 54 9 chr17 1793870 1794094 -83644386 - L1MEd LINE L1 -4898 1221 988 219 335 112 29 chr17 1794130 1794157 -83644323 + L2 LINE L2 2661 2684 -630 2250 124 0 0 chr17 1794157 1794464 -83644016 - AluSq SINE Alu -5 308 2 219 335 112 29 chr17 1794464 1794606 -83643874 + L2 LINE L2 2684 2844 -470 285 167 0 0 chr17 1794826 1794874 -83643606 - Alu SINE Alu -247 52 5 2323 63 14 3 chr17 1796786 1797072 -83641408 - AluSx SINE Alu -23 289 1 189 74 0 0 chr17 1798537 1798564 -83639916 + (ATG)n Simple_repeat Simple_repeat 2 28 0 237 297 51 93 chr17 1798616 1798704 -83639776 - MIR SINE MIR -65 143 60 2393 87 3 13 chr17 1798704 1799013 -83639467 + AluSg SINE Alu 1 306 -4 237 297 51 93 chr17 1799013 1799042 -83639438 - MIR SINE MIR -148 60 31 280 355 11 0 chr17 1799158 1799251 -83639229 - MIR SINE MIR -60 148 55 231 193 35 0 chr17 1799524 1799581 -83638899 + T-rich Low_complexity Low_complexity 2 60 0 228 154 0 0 chr17 1799706 1799758 -83638722 + (TAGA)n Simple_repeat Simple_repeat 3 54 0 467 266 140 70 chr17 1799815 1800338 -83638142 - L1MEc LINE L1 -3574 2641 2119 2317 85 0 10 chr17 1801540 1801835 -83636645 - AluY SINE Alu -19 292 1 252 333 43 11 chr17 1802630 1802723 -83635757 + L2 LINE L2 3168 3263 -9 604 291 28 14 chr17 1803553 1803766 -83634714 - MIR SINE MIR -33 229 14 214 200 186 0 chr17 1803936 1804006 -83634474 + MER5A DNA MER1_type 85 167 -22 201 167 19 56 chr17 1804521 1804575 -83633905 + C-rich Low_complexity Low_complexity 2 53 0 2375 100 7 0 chr17 1805151 1805460 -83633020 - AluSx SINE Alu -1 311 1 316 311 8 42 chr17 1805464 1805583 -83632897 - MIR SINE MIR -101 161 47 414 263 68 8 chr17 1805630 1805748 -83632732 + MIR3 SINE MIR 30 154 -54 325 266 79 79 chr17 1806588 1806765 -83631715 + MIR SINE MIR 15 191 -71 2634 62 0 0 chr17 1808150 1808457 -83630023 - AluY SINE Alu -4 307 1 451 326 59 0 chr17 1809249 1809470 -83629010 + L1MC/D LINE L1 5567 5800 -2008 * 756 261 22 14 chr17 1809458 1809734 -83628746 + L1MB5 LINE L1 3334 3611 -2535 * 2579 205 31 7 chr17 1809713 1810407 -83628073 + L1MB5 LINE L1 5182 5890 -284 2252 96 0 0 chr17 1810412 1810737 -83627743 + AluSg SINE Alu 1 325 0 378 211 0 10 chr17 1810797 1810900 -83627580 + L1M4 LINE L1 5597 5694 -470 2151 38 0 0 chr17 1810900 1811139 -83627341 + AluY SINE Alu 1 239 -72 2262 109 3 0 chr17 1812872 1813174 -83625306 + AluSx SINE Alu 2 304 -8 2287 121 3 0 chr17 1813249 1813556 -83624924 - AluSq SINE Alu -5 308 1 299 284 78 23 chr17 1813928 1814101 -83624379 + MIR SINE MIR 3 184 -61 289 303 215 46 chr17 1815063 1815324 -83623156 + L2 LINE L2 2966 3270 -2 317 246 0 0 chr17 1815665 1815734 -83622746 - MIR SINE MIR -79 129 61 1348 19 0 0 chr17 1815993 1816155 -83622325 + L1PA4 LINE L1 5994 6155 0 231 292 21 21 chr17 1816416 1816512 -83621968 + MIR SINE MIR 21 116 -92 2224 81 4 0 chr17 1816669 1816942 -83621538 - AluSp SINE Alu -39 274 1 1081 82 0 7 chr17 1816942 1817077 -83621403 - AluSq/x SINE Alu -179 134 1 2202 130 0 0 chr17 1817096 1817388 -83621092 - AluSx SINE Alu -20 292 1 581 265 24 30 chr17 1817406 1817455 -83621025 + MIR SINE MIR 98 146 -116 2483 139 12 21 chr17 1817455 1817526 -83620954 - MSTA LTR MaLR 0 428 358 2415 105 3 0 chr17 1817526 1817830 -83620650 + AluSg SINE Alu 1 305 -5 2483 139 12 21 chr17 1817830 1818190 -83620290 - MSTA LTR MaLR -70 358 1 581 265 24 30 chr17 1818190 1818306 -83620174 + MIR SINE MIR 146 262 0 2490 81 7 0 chr17 1819064 1819373 -83619107 - AluSx SINE Alu -1 311 1 1233 128 35 62 chr17 1819376 1819602 -83618878 - AluJo SINE Alu -7 305 86 350 305 114 0 chr17 1819917 1820022 -83618458 + MIR SINE MIR 76 192 -70 457 210 16 113 chr17 1820494 1820564 -83617916 - MLT1C LTR MaLR -3 464 456 2259 113 0 10 chr17 1820564 1820875 -83617605 - AluSx SINE Alu -4 308 1 457 210 16 113 chr17 1820875 1820974 -83617506 - MLT1C LTR MaLR -11 456 349 427 230 143 53 chr17 1821127 1821392 -83617088 - MLT1C LTR MaLR -123 382 94 1272 220 9 46 chr17 1821393 1821716 -83616764 - MLT1A1 LTR MaLR 0 365 55 674 118 14 217 chr17 1822194 1822415 -83616065 - AluSg/x SINE Alu -1 308 133 2446 84 3 0 chr17 1822415 1822711 -83615769 - AluSg SINE Alu -13 297 1 2246 95 10 17 chr17 1822711 1823007 -83615473 - AluSx SINE Alu -18 294 1 879 222 116 58 chr17 1823091 1823541 -83614939 - HAL1b LINE L1 -6 1342 867 212 356 0 42 chr17 1823894 1824012 -83614468 + G-rich Low_complexity Low_complexity 2 114 0 1061 153 45 0 chr17 1824575 1824794 -83613686 + AluSg/x SINE Alu 96 322 0 1601 112 32 83 chr17 1824794 1824955 -83613525 + L1M3 LINE L1 5319 5458 -710 2150 76 6 29 chr17 1824955 1825271 -83613209 + AluSc SINE Alu 1 309 0 1601 112 32 83 chr17 1825271 1825423 -83613057 + L1M3 LINE L1 5458 5616 -552 * 4675 209 56 77 chr17 1825422 1825970 -83612510 - L1M4 LINE L1 -1191 4955 4397 2185 72 31 7 chr17 1825970 1826262 -83612218 - AluY SINE Alu -12 299 1 4675 209 56 77 chr17 1826262 1826866 -83611614 - L1M4 LINE L1 -1749 4397 3839 2099 109 3 3 chr17 1826866 1827178 -83611302 - AluSx SINE Alu 0 312 1 4675 209 56 77 chr17 1827178 1827537 -83610943 - L1M4 LINE L1 -2307 3839 3474 240 209 149 88 chr17 1827773 1827847 -83610633 - MER5A DNA MER1_type -32 157 89 2176 92 3 0 chr17 1827847 1828142 -83610338 - AluSq SINE Alu -17 296 1 240 209 149 88 chr17 1828142 1828215 -83610265 - MER5A DNA MER1_type -100 89 1 459 246 25 49 chr17 1828613 1828735 -83609745 - L2 LINE L2 -2 3311 3193 196 206 0 0 chr17 1830481 1830515 -83607965 - L2 LINE L2 -10 3262 3229 181 143 0 0 chr17 1830642 1830670 -83607810 - L2 LINE L2 -16 3256 3229 181 143 0 0 chr17 1830766 1830794 -83607686 - L2 LINE L2 -16 3256 3229 2137 123 7 0 chr17 1831131 1831439 -83607041 - AluSx SINE Alu -2 310 1 311 280 48 79 chr17 1831588 1831693 -83606787 - MIR SINE MIR -13 249 151 2331 95 0 0 chr17 1831693 1831998 -83606482 - AluSx SINE Alu -7 305 1 311 280 48 79 chr17 1831998 1832081 -83606399 - MIR SINE MIR -111 151 67 342 190 0 0 chr17 1832467 1832525 -83605955 + MLT1F1 LTR MaLR 6 63 -504 2053 125 3 0 chr17 1832530 1832826 -83605654 + AluJb SINE Alu 7 303 -9 2154 94 0 0 chr17 1832839 1833148 -83605332 + AluSx SINE Alu 1 309 0 355 298 33 50 chr17 1833396 1833620 -83604860 - L1ME LINE L1 -372 5798 5579 1962 111 7 4 chr17 1833984 1834264 -83604216 - AluSq SINE Alu -32 281 1 304 310 200 0 chr17 1834267 1834422 -83604058 - MIR SINE MIR -61 201 16 645 217 28 28 chr17 1834679 1834859 -83603621 - MER104 DNA MER2_type 0 180 1 2174 103 0 0 chr17 1835058 1835350 -83603130 + AluSx SINE Alu 1 292 -20 253 229 29 0 chr17 1835785 1835855 -83602625 - L2 LINE L2 -284 2988 2917 1746 71 4 8 chr17 1836646 1836884 -83601596 - AluSg/x SINE Alu -3 307 71 548 44 0 0 chr17 1836885 1836953 -83601527 - AluY SINE Alu -10 302 235 21 0 0 0 chr17 1836953 1836974 -83601506 + AT_rich Low_complexity Low_complexity 1 21 0 297 0 0 0 chr17 1838176 1838209 -83600271 + (CA)n Simple_repeat Simple_repeat 2 34 0 2193 97 13 7 chr17 1838339 1838648 -83599832 - AluSx SINE Alu -1 311 1 262 130 0 43 chr17 1838649 1838718 -83599762 + (TTTTG)n Simple_repeat Simple_repeat 5 70 0 228 326 61 0 chr17 1840055 1840153 -83598327 - MER91A DNA MER1_type -48 148 45 1811 143 14 10 chr17 1840242 1840536 -83597944 - AluJo SINE Alu -15 297 3 240 326 22 0 chr17 1841178 1841270 -83597210 + L3b LINE CR1 1283 1376 -207 885 226 52 82 chr17 1841783 1842037 -83596443 + MLT1D LTR MaLR 1 242 -263 2483 31 0 0 chr17 1842037 1842328 -83596152 + AluY SINE Alu 1 291 -20 885 226 52 82 chr17 1842328 1842441 -83596039 + MLT1D LTR MaLR 242 357 -148 1511 90 10 0 chr17 1842541 1842742 -83595738 - THE1A LTR MaLR -152 203 1 11444 91 10 24 chr17 1842742 1843827 -83594653 - THE1A-int LTR MaLR 0 1580 481 2113 103 37 0 chr17 1843827 1844127 -83594353 - AluY SINE Alu 0 311 1 11444 91 10 24 chr17 1844127 1844200 -83594280 - THE1A-int LTR MaLR -1099 481 408 1849 108 3 42 chr17 1844200 1844507 -83593973 - AluSx SINE Alu -15 297 3 11444 91 10 24 chr17 1844507 1844950 -83593530 - THE1A-int LTR MaLR -1172 408 1 2505 114 14 0 chr17 1844950 1845300 -83593180 - THE1A LTR MaLR 0 355 1 666 185 0 0 chr17 1845303 1845411 -83593069 - FLAM_C SINE Alu -34 109 2 23 54 0 0 chr17 1845571 1845608 -83592872 + AT_rich Low_complexity Low_complexity 1 37 0 1669 140 3 57 chr17 1846213 1846528 -83591952 + AluJo SINE Alu 1 298 -14 2132 101 7 10 chr17 1846538 1846835 -83591645 + AluSx SINE Alu 1 296 -16 1979 100 0 4 chr17 1847139 1847418 -83591062 - AluSg SINE Alu -30 280 3 15218 208 16 12 chr17 1847420 1851423 -83587057 - L1PA12 LINE L1 -752 6832 2822 230 283 65 0 chr17 1851431 1851523 -83586957 + L1ME LINE L1 5727 5824 -297 2200 106 3 6 chr17 1851527 1851839 -83586641 + AluSx SINE Alu 1 311 -1 1138 282 151 10 chr17 1851842 1852431 -83586049 - L1PA12 LINE L1 -6186 1399 728 434 223 133 30 chr17 1852470 1852636 -83585844 - L1MC5 LINE L1 -37 7924 7742 828 176 0 0 chr17 1852653 1852795 -83585685 - FLAM_C SINE Alu 0 143 2 938 208 83 39 chr17 1852796 1853133 -83585347 - L1MC5 LINE L1 -232 7729 7378 1693 167 63 0 chr17 1853134 1853451 -83585029 - MER2 DNA MER2_type 0 345 9 490 134 107 9 chr17 1853460 1853572 -83584908 - L1MC5 LINE L1 -583 7378 7256 2024 127 13 0 chr17 1853728 1854035 -83584445 - AluSq SINE Alu -2 311 1 312 343 180 35 chr17 1854154 1854701 -83583779 + L2 LINE L2 1780 2467 -847 2121 99 3 7 chr17 1854701 1855003 -83583477 - AluSx SINE Alu -11 301 1 312 343 180 35 chr17 1855003 1855205 -83583275 + L2 LINE L2 2467 2638 -676 213 329 21 100 chr17 1855406 1855448 -83583032 + L2 LINE L2 3144 3188 -84 2038 106 17 0 chr17 1855448 1855741 -83582739 + AluSq SINE Alu 1 298 -15 213 329 21 100 chr17 1855741 1855838 -83582642 + L2 LINE L2 3188 3272 0 1712 147 10 17 chr17 1855922 1856222 -83582258 - AluJo SINE Alu -4 308 11 1216 173 57 83 chr17 1856385 1856685 -83581795 + AluJb SINE Alu 1 292 -20 620 160 28 0 chr17 1857017 1857123 -83581357 - AluSx SINE Alu -10 300 192 917 141 0 0 chr17 1857130 1857265 -83581215 - AluSx SINE Alu -178 135 1 1299 194 44 34 chr17 1857298 1857591 -83580889 - AluJo SINE Alu -16 296 1 290 277 0 60 chr17 1857610 1857693 -83580787 + L2 LINE L2 3185 3262 -10 1257 181 58 11 chr17 1857898 1858158 -83580322 + AluJo SINE Alu 28 299 -13 2101 106 0 7 chr17 1859072 1859373 -83579107 - AluSq SINE Alu -14 299 1 2303 74 3 0 chr17 1859466 1859763 -83578717 - AluY SINE Alu -13 298 1 2028 96 0 4 chr17 1860166 1860446 -83578034 - AluSg SINE Alu -16 294 16 22 35 0 0 chr17 1860453 1860482 -83577998 + AT_rich Low_complexity Low_complexity 1 29 0 3273 254 72 50 chr17 1860487 1861017 -83577463 - L1MD3 LINE L1 0 8042 7525 1819 124 0 4 chr17 1861017 1861283 -83577197 - AluSg SINE Alu -13 297 33 3273 254 72 50 chr17 1861283 1861700 -83576780 - L1MD3 LINE L1 -517 7525 7119 2177 96 0 34 chr17 1861700 1862023 -83576457 - AluSx SINE Alu 0 312 1 3273 254 72 50 chr17 1862023 1862442 -83576038 - L1MD3 LINE L1 -923 7119 6659 640 187 193 0 chr17 1862447 1862597 -83575883 - MER20 DNA MER1_type -5 214 36 559 297 112 29 chr17 1862639 1862805 -83575675 - L1MC4a LINE L1 -1208 6600 6449 1524 154 37 85 chr17 1862805 1863182 -83575298 + MER46B DNA MER2_type 2 235 -1 559 297 112 29 chr17 1863182 1863643 -83574837 - L1MC4a LINE L1 -1359 6449 5901 1558 127 0 95 chr17 1863645 1863983 -83574497 - AluJo SINE Alu -6 306 1 718 169 73 15 chr17 1863983 1864119 -83574361 - AluJo SINE Alu -167 145 2 1912 125 3 23 chr17 1864119 1864424 -83574056 - AluSx SINE Alu -13 299 1 1149 171 76 36 chr17 1864467 1864718 -83573762 - AluJo SINE Alu -46 266 6 485 245 12 105 chr17 1864734 1864824 -83573656 - L1MC4a LINE L1 -1926 5882 5785 2090 121 0 3 chr17 1864824 1865131 -83573349 + AluSq SINE Alu 1 306 -7 485 245 12 105 chr17 1865131 1865297 -83573183 - L1MC4a LINE L1 -2023 5785 5650 1724 169 10 0 chr17 1865529 1865825 -83572655 + AluJb SINE Alu 1 299 -13 1996 100 18 0 chr17 1865880 1866161 -83572319 + AluSx SINE Alu 1 286 -26 219 36 0 0 chr17 1866161 1866189 -83572291 + (TA)n Simple_repeat Simple_repeat 2 29 0 2010 90 32 0 chr17 1866189 1866468 -83572012 - AluY SINE Alu -23 288 1 826 314 96 80 chr17 1866476 1866990 -83571490 + L1M4 LINE L1 2870 3401 -2745 1657 114 29 0 chr17 1866990 1867236 -83571244 + AluSx SINE Alu 56 308 -4 826 314 96 80 chr17 1867236 1867483 -83570997 + L1M4 LINE L1 3401 3643 -2503 1544 163 56 24 chr17 1867514 1867632 -83570848 + AluSg SINE Alu 1 114 -196 1927 107 6 50 chr17 1867632 1867949 -83570531 + AluSx SINE Alu 1 303 -9 1544 163 56 24 chr17 1867949 1868118 -83570362 + AluSg SINE Alu 114 297 -13 225 310 147 42 chr17 1868119 1868216 -83570264 + L1M4 LINE L1 3695 3780 -2366 2320 102 26 50 chr17 1868216 1868287 -83570193 - THE1C LTR MaLR 0 375 304 2124 82 7 0 chr17 1868287 1868594 -83569886 + AluY SINE Alu 1 309 0 2320 102 26 50 chr17 1868594 1868905 -83569575 - THE1C LTR MaLR -71 304 1 225 310 147 42 chr17 1868905 1868959 -83569521 + L1M4 LINE L1 3780 3827 -2319 1958 137 0 3 chr17 1868959 1869258 -83569222 + AluSx SINE Alu 1 298 -14 225 310 147 42 chr17 1869258 1869560 -83568920 + L1M4 LINE L1 3827 4197 -1949 860 138 13 38 chr17 1869638 1869797 -83568683 + AluSg/x SINE Alu 146 300 -12 1946 123 7 10 chr17 1869855 1870157 -83568323 + AluSx SINE Alu 1 301 -11 246 262 60 27 chr17 1870184 1870333 -83568147 + L1M4 LINE L1 4505 4658 -1488 24 0 0 0 chr17 1870336 1870360 -83568120 + AT_rich Low_complexity Low_complexity 1 24 0 226 189 19 0 chr17 1870592 1870645 -83567835 + L1M4 LINE L1 5115 5168 -978 913 165 215 58 chr17 1870667 1870794 -83567686 + AluJb SINE Alu 1 107 -195 2159 111 0 0 chr17 1870794 1871091 -83567389 + AluSx SINE Alu 1 297 -15 913 165 215 58 chr17 1871091 1871224 -83567256 + AluJb SINE Alu 107 302 0 337 297 96 41 chr17 1871527 1871746 -83566734 - L1 LINE L1 -1034 5112 4882 1899 132 0 26 chr17 1871859 1872169 -83566311 + AluSx SINE Alu 1 302 -10 1875 168 93 26 chr17 1872308 1872694 -83565786 - L1MC2 LINE L1 -71 6273 5855 2386 51 3 16 chr17 1872694 1873005 -83565475 + AluY SINE Alu 1 307 -4 1875 168 93 26 chr17 1873005 1873036 -83565444 - L1MC2 LINE L1 -489 5855 5828 5623 46 3 5 chr17 1873321 1873995 -83564485 + L1PA5 LINE L1 5481 6153 -1 2190 107 3 28 chr17 1874352 1874671 -83563809 - AluY SINE Alu 0 311 1 1904 130 60 0 chr17 1874755 1875039 -83563441 - AluSq SINE Alu -12 301 1 1884 174 0 0 chr17 1875208 1875506 -83562974 - AluJb SINE Alu -14 298 1 657 165 126 77 chr17 1875506 1875688 -83562792 - AluJo SINE Alu -3 309 119 297 0 0 0 chr17 1875748 1875781 -83562699 + (TG)n Simple_repeat Simple_repeat 2 34 0 1456 171 121 11 chr17 1875956 1876220 -83562260 + AluSg SINE Alu 1 293 -17 503 200 0 0 chr17 1876243 1876338 -83562142 + U13 snRNA snRNA 1 95 -9 2328 95 3 10 chr17 1876482 1876788 -83561692 - AluSg SINE Alu -6 304 1 1203 168 25 15 chr17 1876816 1877013 -83561467 + AluJo SINE Alu 83 281 -31 885 96 0 0 chr17 1877494 1877609 -83560871 - AluY SINE Alu -20 291 177 338 268 64 119 chr17 1877627 1877809 -83560671 - L1 LINE L1 -2034 4112 3944 2098 127 3 7 chr17 1877809 1878108 -83560372 - AluSx SINE Alu -14 298 1 338 268 64 119 chr17 1878108 1878160 -83560320 - L1 LINE L1 -2202 3944 3891 2016 133 28 0 chr17 1879536 1879821 -83558659 + AluSx SINE Alu 1 293 -19 2137 102 56 0 chr17 1879821 1880106 -83558374 + AluSc SINE Alu 1 301 -8 1997 126 14 20 chr17 1880115 1880408 -83558072 + AluSx SINE Alu 1 291 -21 6149 90 60 6 chr17 1880795 1882209 -83556271 - L1PA8 LINE L1 0 6172 4675 1593 103 210 4 chr17 1882378 1882630 -83555850 + AluY SINE Alu 1 304 -7 2111 119 0 46 chr17 1882897 1882943 -83555537 - AluSx SINE Alu 0 312 265 414 0 0 0 chr17 1882943 1882989 -83555491 + (TG)n Simple_repeat Simple_repeat 1 46 0 2111 119 0 46 chr17 1882989 1883269 -83555211 - AluSx SINE Alu -47 265 1 2257 106 3 10 chr17 1883393 1883694 -83554786 + AluSp SINE Alu 1 299 -14 1062 104 84 0 chr17 1883695 1883849 -83554631 + AluY SINE Alu 135 301 -10 874 211 0 0 chr17 1883940 1884106 -83554374 - AluJb SINE Alu 0 312 147 2241 110 10 0 chr17 1884266 1884557 -83553923 - AluSg SINE Alu -16 294 1 612 88 0 0 chr17 1884558 1884638 -83553842 - AluSg SINE Alu -224 86 7 1137 141 0 0 chr17 1884808 1884971 -83553509 - AluSp SINE Alu -14 299 137 1850 93 4 0 chr17 1884972 1885208 -83553272 - AluSg SINE Alu -14 296 60 312 27 0 0 chr17 1885230 1885267 -83553213 + (TC)n Simple_repeat Simple_repeat 1 37 0 299 208 0 0 chr17 1885275 1885328 -83553152 + Tigger4(Zombi) DNA MER2_type 2679 2731 0 2448 97 7 0 chr17 1886155 1886464 -83552016 - AluSx SINE Alu -1 311 1 342 231 20 121 chr17 1886974 1887173 -83551307 + MIR SINE MIR 84 262 0 993 67 0 0 chr17 1887790 1887909 -83550571 + AluY SINE Alu 174 292 -19 2110 99 14 3 chr17 1888607 1888891 -83549589 + AluSx SINE Alu 1 287 -25 1915 147 31 0 chr17 1888969 1889255 -83549225 + AluJo SINE Alu 1 295 -17 2310 58 0 7 chr17 1889258 1889533 -83548947 + AluY SINE Alu 1 273 -38 409 293 63 63 chr17 1889638 1889812 -83548668 + L1ME LINE L1 5552 5725 -396 2166 92 27 7 chr17 1889830 1890123 -83548357 - AluSq SINE Alu -14 299 1 248 217 0 36 chr17 1890311 1890394 -83548086 + CT-rich Low_complexity Low_complexity 4 83 0 467 276 173 5 chr17 1891382 1891567 -83546913 + MIR SINE MIR 31 246 -16 2281 83 13 17 chr17 1891756 1892056 -83546424 - AluSg SINE Alu 0 310 12 2267 128 0 0 chr17 1892161 1892467 -83546013 - AluSx SINE Alu -6 306 1 1810 165 0 49 chr17 1892550 1892877 -83545603 + AluJo SINE Alu 1 311 -1 2335 102 7 0 chr17 1893352 1893647 -83544833 + AluSq SINE Alu 1 297 -16 2740 36 0 0 chr17 1893922 1894229 -83544251 + AluY SINE Alu 1 307 -4 22 0 0 0 chr17 1895241 1895263 -83543217 + AT_rich Low_complexity Low_complexity 1 22 0 606 223 0 15 chr17 1895427 1895557 -83542923 + FLAM_A SINE Alu 5 132 -1 2031 136 10 7 chr17 1895572 1895867 -83542613 - AluSx SINE Alu -16 296 1 846 83 101 0 chr17 1896089 1896198 -83542282 + AluJo SINE Alu 6 125 -187 1132 152 0 17 chr17 1896239 1896417 -83542063 + AluJo SINE Alu 120 294 -18 2227 106 0 28 chr17 1896656 1896976 -83541504 + AluSx SINE Alu 1 311 -1 2427 54 34 3 chr17 1897445 1897739 -83540741 + AluY SINE Alu 1 303 -8 2440 71 0 0 chr17 1898137 1898456 -83540024 + AluY SINE Alu 1 311 0 2235 118 0 31 chr17 1898539 1898684 -83539796 + AluSx SINE Alu 1 149 -163 2345 90 10 3 chr17 1898684 1898984 -83539496 + AluSp SINE Alu 1 302 -11 2235 118 0 31 chr17 1898984 1899160 -83539320 + AluSx SINE Alu 149 312 0 1710 163 41 34 chr17 1899170 1899464 -83539016 + AluJo SINE Alu 1 296 -16 737 240 12 6 chr17 1899475 1899646 -83538834 + MER3 DNA MER1_type 38 209 0 1146 112 0 0 chr17 1899890 1900236 -83538244 + (TGGA)n Simple_repeat Simple_repeat 1 346 0 595 275 128 32 chr17 1900245 1900652 -83537828 - L1MC4 LINE L1 -48 7994 7549 242 299 126 0 chr17 1901393 1901480 -83537000 + MIR SINE MIR 153 250 -12 2165 131 3 0 chr17 1901520 1901817 -83536663 + 7SLRNA srpRNA srpRNA 18 315 -5 1159 129 20 65 chr17 1902052 1902253 -83536227 - AluJb SINE Alu -34 278 87 186 43 0 0 chr17 1904125 1904148 -83534332 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 261 0 0 0 chr17 1906187 1906216 -83532264 + (T)n Simple_repeat Simple_repeat 1 29 0 853 98 0 8 chr17 1906565 1906698 -83531782 + FLAM_C SINE Alu 2 133 0 1992 143 10 10 chr17 1907013 1907321 -83531159 + AluSq SINE Alu 1 308 -5 308 258 153 31 chr17 1907654 1907817 -83530663 + MER5A DNA MER1_type 7 189 0 2357 103 0 0 chr17 1907916 1908217 -83530263 - AluSg SINE Alu -9 301 1 2116 104 0 11 chr17 1908539 1908818 -83529662 - AluSq SINE Alu -37 276 1 2083 101 3 0 chr17 1911846 1912133 -83526347 + AluSg SINE Alu 1 288 -22 304 30 60 30 chr17 1912495 1912562 -83525918 + (CCCCCG)n Simple_repeat Simple_repeat 5 73 0 1704 130 0 0 chr17 1913731 1913984 -83524496 + AluSx SINE Alu 54 306 0 2444 74 7 3 chr17 1917682 1917981 -83520499 + AluSp SINE Alu 1 300 -13 180 138 0 0 chr17 1919280 1919309 -83519171 + MIR SINE MIR 117 145 -117 2177 106 0 10 chr17 1919326 1919618 -83518862 + AluSx SINE Alu 1 289 -23 1870 147 0 14 chr17 1919899 1920192 -83518288 - AluJb SINE Alu -23 289 1 2356 104 0 0 chr17 1920196 1920494 -83517986 - AluSg SINE Alu -12 298 1 2444 88 0 3 chr17 1923382 1923690 -83514790 - AluSq SINE Alu -6 307 1 344 312 33 45 chr17 1924508 1924684 -83513796 - MIR3 SINE MIR 0 208 35 245 260 146 32 chr17 1924750 1924873 -83513607 + MIR SINE MIR 47 184 -24 187 291 157 22 chr17 1926868 1927002 -83511478 - MIR3 SINE MIR -34 174 23 236 219 31 31 chr17 1929053 1929117 -83509363 - MIR SINE MIR -118 144 81 306 186 4 35 chr17 1930688 1930772 -83507708 + MIR SINE MIR 49 126 -82 214 158 42 63 chr17 1932066 1932161 -83506319 + (CCCG)n Simple_repeat Simple_repeat 4 96 0 225 226 312 0 chr17 1932918 1933004 -83505476 - MIR SINE MIR -49 159 49 1631 106 21 100 chr17 1933408 1933736 -83504744 + AluJo SINE Alu 1 302 -10 2338 67 7 0 chr17 1933736 1934034 -83504446 + AluSq SINE Alu 1 300 -13 358 246 40 43 chr17 1934065 1934232 -83504248 + L1MC4 LINE L1 1959 6985 -1337 260 254 103 11 chr17 1934256 1934437 -83504043 - L1MC4a LINE L1 -507 5826 5729 2016 135 26 0 chr17 1934611 1934914 -83503566 + AluJb SINE Alu 1 311 -1 2087 103 3 0 chr17 1935038 1935328 -83503152 - AluSx SINE Alu -21 291 1 484 286 0 0 chr17 1935405 1935531 -83502949 + MER94 DNA DNA 1 126 -8 2299 93 3 0 chr17 1935568 1935870 -83502610 - AluSg SINE Alu -7 303 1 195 411 56 0 chr17 1935873 1935963 -83502517 + L2 LINE L2 3155 3249 -23 960 195 0 0 chr17 1935968 1936137 -83502343 - FRAM SINE Alu -4 172 4 1723 75 6 177 chr17 1936263 1936630 -83501850 - AluSp SINE Alu 0 308 1 2152 110 7 0 chr17 1936915 1937223 -83501257 + AluSx SINE Alu 1 310 -2 335 194 10 126 chr17 1937678 1937746 -83500734 + MIR3 SINE MIR 112 186 -22 1784 124 10 59 chr17 1937746 1938052 -83500428 + AluSx SINE Alu 1 291 -21 2328 71 7 0 chr17 1938053 1938348 -83500132 + AluY SINE Alu 1 297 -14 335 194 10 126 chr17 1938348 1938380 -83500100 + MIR3 SINE MIR 185 202 -6 2120 136 0 0 chr17 1938475 1938783 -83499697 - AluSx SINE Alu -4 308 1 241 195 0 0 chr17 1939052 1939093 -83499387 + Alu SINE Alu 239 279 -22 636 171 0 18 chr17 1939147 1939258 -83499222 + FLAM_A SINE Alu 20 128 -14 2035 122 30 0 chr17 1939259 1939563 -83498917 + AluSp SINE Alu 1 313 0 516 210 129 47 chr17 1939588 1939700 -83498780 - MLT1K LTR MaLR -66 522 421 2191 107 0 7 chr17 1939700 1940008 -83498472 - AluSg SINE Alu -4 306 1 516 210 129 47 chr17 1940008 1940128 -83498352 - MLT1K LTR MaLR -167 421 271 288 299 13 0 chr17 1940186 1940263 -83498217 - MLT1K LTR MaLR -318 270 193 2204 97 7 3 chr17 1940898 1941196 -83497284 - AluSx SINE Alu -13 299 1 2489 53 0 3 chr17 1943751 1944055 -83494425 - AluSq SINE Alu -10 303 1 27 116 0 0 chr17 1945142 1945288 -83493192 + GC_rich Low_complexity Low_complexity 1 146 0 2173 93 0 31 chr17 1945655 1945976 -83492504 + AluSx SINE Alu 1 311 -1 551 320 82 42 chr17 1946142 1946520 -83491960 - L2 LINE L2 -1 3271 2879 2147 84 3 72 chr17 1946551 1946747 -83491733 - AluSx SINE Alu -3 309 144 2360 60 0 17 chr17 1946747 1947046 -83491434 - AluY SINE Alu -17 294 1 2147 84 3 72 chr17 1947046 1947181 -83491299 - AluSx SINE Alu -168 144 1 2048 108 10 14 chr17 1947181 1947477 -83491003 - AluSg SINE Alu -15 295 1 1433 168 119 0 chr17 1947478 1947746 -83490734 - AluJo SINE Alu -12 300 1 591 328 6 0 chr17 1947796 1947973 -83490507 + MER5B DNA MER1_type 1 178 0 2386 90 0 6 chr17 1948108 1948420 -83490060 + AluSg SINE Alu 1 310 0 802 145 0 36 chr17 1948450 1948588 -83489892 + FRAM SINE Alu 28 160 -16 1435 174 68 14 chr17 1948609 1948890 -83489590 + AluJb SINE Alu 1 296 -16 2449 49 13 0 chr17 1948890 1949196 -83489284 + AluY SINE Alu 1 310 -1 24 0 0 0 chr17 1949592 1949616 -83488864 + AT_rich Low_complexity Low_complexity 1 24 0 806 168 0 0 chr17 1949617 1949736 -83488744 - FLAM_C SINE Alu -24 119 1 2209 88 0 13 chr17 1949773 1950079 -83488401 + AluSx SINE Alu 1 302 -10 681 196 55 0 chr17 1950200 1950363 -83488117 - L1MB2 LINE L1 -5 6166 5995 263 283 0 0 chr17 1950707 1950767 -83487713 + MER91A DNA MER1_type 4 63 -133 216 200 59 82 chr17 1950801 1950886 -83487594 + MER91A DNA MER1_type 18 100 -96 378 0 0 0 chr17 1951086 1951128 -83487352 + (TG)n Simple_repeat Simple_repeat 1 42 0 216 0 0 0 chr17 1951127 1951151 -83487329 + (GA)n Simple_repeat Simple_repeat 1 24 0 * 543 207 18 0 chr17 1952532 1952643 -83485837 + MIR SINE MIR 80 192 -70 2148 118 0 0 chr17 1952999 1953296 -83485184 + AluSx SINE Alu 1 297 -15 2462 47 0 10 chr17 1953296 1953642 -83484838 + AluY SINE Alu 1 311 0 2541 58 3 0 chr17 1953813 1954123 -83484357 - AluSp SINE Alu -2 311 1 2442 76 0 6 chr17 1954309 1954624 -83483856 - AluSp SINE Alu 0 313 1 253 299 29 135 chr17 1954699 1954973 -83483507 + L2 LINE L2 2919 3163 -109 2206 99 3 0 chr17 1955059 1955352 -83483128 - AluY SINE Alu -17 294 1 190 211 0 0 chr17 1955928 1955966 -83482514 - MIR SINE MIR -61 147 110 2195 115 0 0 chr17 1955997 1956293 -83482187 - AluSx SINE Alu -14 298 3 554 236 38 25 chr17 1956358 1956515 -83481965 + MIR3 SINE MIR 35 193 -15 2072 108 3 0 chr17 1956712 1956999 -83481481 + AluSg SINE Alu 1 288 -22 216 0 0 0 chr17 1956999 1957023 -83481457 + (TTAAA)n Simple_repeat Simple_repeat 2 25 0 809 164 0 0 chr17 1957029 1957151 -83481329 + FLAM_C SINE Alu 1 122 -21 1959 122 10 10 chr17 1957163 1957520 -83480960 + AluSx SINE Alu 1 312 0 2466 48 10 16 chr17 1958027 1958340 -83480140 - AluY SINE Alu 0 311 1 582 207 38 44 chr17 1958613 1958637 -83479843 + MIR SINE MIR 32 55 -207 1545 158 15 8 chr17 1958637 1958902 -83479578 - AluJo SINE Alu -45 267 1 582 207 38 44 chr17 1958902 1959052 -83479428 + MIR SINE MIR 55 208 -54 2302 41 48 3 chr17 1959055 1959348 -83479132 + AluY SINE Alu 1 306 -5 2161 112 0 0 chr17 1959353 1959648 -83478832 + AluSx SINE Alu 1 295 -17 2330 87 0 3 chr17 1959650 1959960 -83478520 + AluSc SINE Alu 1 309 0 2258 74 3 7 chr17 1959963 1960251 -83478229 + AluY SINE Alu 1 289 -22 299 25 25 0 chr17 1960251 1960291 -83478189 + (TAGA)n Simple_repeat Simple_repeat 4 44 0 534 256 107 66 chr17 1960415 1960704 -83477776 - L2 LINE L2 -2 3311 3011 1124 164 100 9 chr17 1960711 1960942 -83477538 + MLT1E1 LTR MaLR 1 252 -402 2235 112 0 3 chr17 1960944 1961257 -83477223 + AluSx SINE Alu 1 312 0 531 173 11 8 chr17 1961319 1961333 -83477147 + MLT1E LTR MaLR 357 369 -224 1455 142 9 0 chr17 1961333 1961559 -83476921 + AluJb SINE Alu 84 311 -1 531 173 11 8 chr17 1961559 1961660 -83476820 + MLT1E LTR MaLR 369 593 0 250 211 111 11 chr17 1961660 1961750 -83476730 - L2 LINE L2 -258 3014 2916 267 281 0 0 chr17 1961763 1961827 -83476653 - MIR SINE MIR 0 262 199 * 292 350 54 39 chr17 1961825 1961959 -83476521 - L2 LINE L2 -400 2914 2775 2043 110 0 32 chr17 1961959 1962156 -83476324 + AluSx SINE Alu 1 186 -126 2397 73 0 0 chr17 1962156 1962456 -83476024 - AluY SINE Alu -11 300 1 2043 110 0 32 chr17 1962456 1962568 -83475912 + AluSx SINE Alu 186 300 -12 292 350 54 39 chr17 1962568 1962636 -83475844 - L2 LINE L2 -539 2775 2709 1217 153 14 5 chr17 1962639 1962848 -83475632 - AluJo SINE Alu -15 297 87 676 304 57 18 chr17 1962853 1963133 -83475347 - L2 LINE L2 -604 2710 2420 2160 256 88 41 chr17 1963179 1963712 -83474768 + L2 LINE L2 2153 2660 -653 2251 92 0 3 chr17 1963712 1964015 -83474465 + AluSx SINE Alu 1 302 -10 2160 256 88 41 chr17 1964015 1964427 -83474053 + L2 LINE L2 2660 3051 -262 2235 101 0 10 chr17 1964427 1964734 -83473746 - AluSg SINE Alu 0 310 7 2160 256 88 41 chr17 1964734 1964751 -83473729 + L2 LINE L2 3051 3066 -247 1004 161 105 115 chr17 1964751 1965056 -83473424 - AluJo SINE Alu 0 302 1 2160 256 88 41 chr17 1965056 1965203 -83473277 + L2 LINE L2 3066 3312 -1 252 234 110 69 chr17 1965196 1965341 -83473139 - L2 LINE L2 -887 2427 2277 * 1882 133 16 35 chr17 1965345 1965661 -83472819 + AluJb SINE Alu 3 312 0 201 322 0 0 chr17 1965718 1965805 -83472675 + (TG)n Simple_repeat Simple_repeat 2 88 0 2278 119 0 0 chr17 1966534 1966846 -83471634 - AluSq SINE Alu -1 312 1 2202 85 3 3 chr17 1967243 1967536 -83470944 - AluSx SINE Alu -19 293 1 2097 122 0 0 chr17 1968009 1968303 -83470177 + AluSq SINE Alu 1 294 -19 519 273 60 11 chr17 1968421 1968604 -83469876 - MIR SINE MIR -3 259 68 273 280 63 63 chr17 1968837 1969012 -83469468 + L2 LINE L2 3005 3179 -134 330 67 0 0 chr17 1969066 1969111 -83469369 + (TG)n Simple_repeat Simple_repeat 1 45 0 181 277 21 0 chr17 1969123 1969170 -83469310 + L2 LINE L2 3180 3227 -86 331 308 0 0 chr17 1970229 1970349 -83468131 + G-rich Low_complexity Low_complexity 1 120 0 341 195 146 0 chr17 1970646 1970728 -83467752 + MIR SINE MIR 33 126 -82 2082 89 13 13 chr17 1970834 1971137 -83467343 + AluSx SINE Alu 1 303 -9 418 144 10 96 chr17 1971269 1971373 -83467107 + MIR SINE MIR 128 222 -40 1955 142 0 0 chr17 1971792 1972102 -83466378 + AluSg SINE Alu 1 310 0 506 306 44 16 chr17 1972468 1972651 -83465829 + MIR SINE MIR 35 222 -40 2112 110 0 0 chr17 1972731 1973048 -83465432 - AluSx SINE Alu 0 317 1 2076 139 0 3 chr17 1973049 1973351 -83465129 - AluSx SINE Alu -11 301 1 1023 189 0 0 chr17 1973365 1973540 -83464940 - AluJo/FRAM SINE Alu -1 311 137 1789 138 14 3 chr17 1973540 1973822 -83464658 - AluJb SINE Alu -5 307 23 472 246 154 11 chr17 1973953 1974128 -83464352 - MIR SINE MIR -49 213 14 244 184 0 20 chr17 1974340 1974389 -83464091 - LTR33 LTR ERVL 0 521 474 1692 104 0 0 chr17 1974395 1974616 -83463864 + AluSq SINE Alu 1 221 -92 1120 45 0 8 chr17 1974616 1974750 -83463730 - AluSc SINE Alu -176 133 1 689 108 0 0 chr17 1974751 1974853 -83463627 - L1M3 LINE L1 -378 5793 5692 187 43 0 0 chr17 1974859 1974882 -83463598 + (TTTTC)n Simple_repeat Simple_repeat 2 145 0 2239 52 0 25 chr17 1974882 1975168 -83463312 - AluY SINE Alu -1 307 7 206 32 32 0 chr17 1975206 1975237 -83463243 + (TA)n Simple_repeat Simple_repeat 2 33 0 958 177 6 6 chr17 1975239 1975397 -83463083 - FAM SINE Alu -17 158 1 308 353 24 65 chr17 1975405 1975575 -83462905 - L1 LINE L1 -943 5203 5041 2362 62 7 3 chr17 1975580 1975888 -83462592 - AluSg SINE Alu -1 309 1 29 78 0 0 chr17 1976147 1976211 -83462269 + GC_rich Low_complexity Low_complexity 1 64 0 23 0 0 0 chr17 1976284 1976307 -83462173 + GC_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr17 1976338 1976360 -83462120 + GC_rich Low_complexity Low_complexity 1 22 0 378 254 82 22 chr17 1977348 1977482 -83460998 - MIR SINE MIR -90 172 31 2057 126 0 10 chr17 1977681 1977982 -83460498 - AluJb SINE Alu -10 302 5 353 301 16 8 chr17 1978053 1978176 -83460304 + MLT1K LTR MaLR 174 297 -291 2399 64 0 0 chr17 1978438 1978733 -83459747 - AluY SINE Alu -16 295 1 2017 127 3 0 chr17 1978746 1979037 -83459443 - AluSg SINE Alu -18 292 1 486 265 7 26 chr17 1979277 1979428 -83459052 - MLT1K LTR MaLR -3 585 438 1455 150 7 66 chr17 1979431 1979704 -83458776 - AluJo SINE Alu -55 257 1 524 331 38 44 chr17 1979710 1979843 -83458637 - L1MC/D LINE L1 -2030 5778 5646 1727 164 23 13 chr17 1979843 1980012 -83458468 - AluJb SINE Alu -10 302 127 2370 92 0 0 chr17 1980012 1980315 -83458165 - AluSq SINE Alu -10 303 1 1727 164 23 13 chr17 1980315 1980444 -83458036 - AluJb SINE Alu -185 127 1 524 331 38 44 chr17 1980444 1980654 -83457826 - L1MC/D LINE L1 -2162 5646 5437 1881 56 0 0 chr17 1980656 1980887 -83457593 + AluY SINE Alu 81 311 0 2292 90 0 0 chr17 1980915 1981205 -83457275 - AluSx SINE Alu -22 290 1 1334 162 15 19 chr17 1981236 1981507 -83456973 - L1MC3 LINE L1 -200 7585 7316 2170 128 0 0 chr17 1981507 1981819 -83456661 - AluSq SINE Alu -1 312 1 2305 96 3 6 chr17 1981838 1982152 -83456328 - AluSp SINE Alu 0 313 1 467 196 10 0 chr17 1982191 1982288 -83456192 + MER2 DNA MER2_type 1 98 -247 1330 163 0 50 chr17 1982359 1982542 -83455938 - L1M4 LINE L1 -641 5543 5377 2498 65 3 0 chr17 1982542 1982851 -83455629 - AluY SINE Alu -1 310 1 1330 163 0 50 chr17 1982851 1982949 -83455531 - L1M4 LINE L1 -807 5377 5276 2100 111 13 25 chr17 1982951 1983266 -83455214 - AluSx SINE Alu -1 311 1 294 179 0 0 chr17 1983267 1983323 -83455157 - MLT1A2 LTR MaLR -318 56 1 1270 173 5 0 chr17 1983338 1983540 -83454940 - AluJo SINE Alu -109 203 1 2165 125 0 0 chr17 1983978 1984290 -83454190 + AluSx SINE Alu 1 312 0 329 314 8 42 chr17 1984528 1984646 -83453834 + MIR3 SINE MIR 85 198 -10 2104 100 28 0 chr17 1984714 1985005 -83453475 + AluSx SINE Alu 1 299 -13 2373 97 0 0 chr17 1985005 1985315 -83453165 + AluSg SINE Alu 1 310 0 310 338 116 0 chr17 1985703 1985901 -83452579 + L2 LINE L2 2341 2561 -753 776 148 49 0 chr17 1985904 1986026 -83452454 + FLAM_A SINE Alu 1 128 -5 2305 64 0 14 chr17 1986026 1986321 -83452159 + AluY SINE Alu 5 295 -16 1447 107 0 10 chr17 1986328 1986553 -83451927 + AluSg/x SINE Alu 80 302 0 212 342 53 0 chr17 1986553 1986629 -83451851 + L2 LINE L2 2643 2722 -592 1487 171 67 56 chr17 1986800 1986923 -83451557 + MLT1A1 LTR MaLR 1 121 -244 1706 114 103 0 chr17 1986923 1987185 -83451295 + AluSg SINE Alu 3 291 -19 1487 171 67 56 chr17 1987185 1987418 -83451062 + MLT1A1 LTR MaLR 121 361 -4 191 292 0 0 chr17 1987433 1987481 -83450999 + L2 LINE L2 3000 3047 -225 2315 98 7 0 chr17 1987646 1987952 -83450528 + AluSg SINE Alu 1 308 -2 706 276 59 118 chr17 1988166 1988302 -83450178 - L1MC4a LINE L1 -1915 5893 5751 2154 92 14 7 chr17 1988302 1988596 -83449884 - AluY SINE Alu -15 296 1 706 276 59 118 chr17 1988596 1988864 -83449616 - L1MC4a LINE L1 -2057 5751 5513 197 262 0 0 chr17 1988914 1988956 -83449524 + L2 LINE L2 3168 3209 -63 2251 102 0 0 chr17 1988974 1989277 -83449203 + AluSq SINE Alu 1 303 -10 1858 167 0 16 chr17 1989509 1989826 -83448654 + AluJo SINE Alu 1 312 0 2436 35 0 0 chr17 1989840 1990187 -83448293 + AluY SINE Alu 3 349 0 339 223 16 144 chr17 1990258 1990356 -83448124 - L3 LINE CR1 -111 1466 1402 2297 106 0 0 chr17 1990356 1990667 -83447813 + AluSx SINE Alu 2 312 0 339 223 16 144 chr17 1990667 1990756 -83447724 - L3 LINE CR1 -175 1402 1303 2133 120 0 19 chr17 1991323 1991681 -83446799 + AluSx SINE Alu 1 352 0 2263 100 13 0 chr17 1992045 1992354 -83446126 - AluSq SINE Alu 0 313 1 540 169 0 0 chr17 1992468 1992551 -83445929 - FLAM_A SINE Alu -16 126 44 1967 114 11 4 chr17 1992558 1992838 -83445642 - AluSq SINE Alu -17 296 15 1541 173 23 36 chr17 1992852 1993159 -83445321 - AluJo SINE Alu -9 303 1 639 209 162 16 chr17 1993166 1993357 -83445123 - MIR SINE MIR -13 249 31 1997 99 75 3 chr17 1993410 1993702 -83444778 - AluSq SINE Alu 0 313 1 465 376 110 38 chr17 1993704 1994241 -83444239 + L3 LINE CR1 186 683 -894 186 43 0 0 chr17 1994241 1994264 -83444216 + (TTCA)n Simple_repeat Simple_repeat 3 25 0 465 376 110 38 chr17 1994264 1994290 -83444190 + L3 LINE CR1 683 706 -871 2246 80 7 0 chr17 1994290 1994622 -83443858 - AluSq SINE Alu 0 334 1 465 376 110 38 chr17 1994622 1994856 -83443624 + L3 LINE CR1 706 1044 -533 182 383 0 0 chr17 1994892 1994952 -83443528 - L2 LINE L2 -1 3271 3212 1971 103 41 3 chr17 1995045 1995335 -83443145 - AluSx SINE Alu -11 301 1 2098 121 0 35 chr17 1995381 1995696 -83442784 - AluSx SINE Alu -8 304 1 508 290 55 84 chr17 1995775 1996154 -83442326 - L2 LINE L2 -80 3233 2866 451 333 82 0 chr17 1996189 1996384 -83442096 + L3 LINE CR1 1343 1553 -24 2283 73 0 0 chr17 1996461 1996749 -83441731 + AluSx SINE Alu 1 288 -24 204 217 0 17 chr17 1997259 1997319 -83441161 + (CGG)n Simple_repeat Simple_repeat 3 61 0 321 26 0 0 chr17 1997388 1997426 -83441054 + (GGA)n Simple_repeat Simple_repeat 1 38 0 338 243 0 0 chr17 1998509 1998612 -83439868 + GA-rich Low_complexity Low_complexity 2 104 0 230 345 12 12 chr17 1999190 1999274 -83439206 + MIR SINE MIR 2 85 -177 310 197 33 0 chr17 1999763 1999824 -83438656 + MIR SINE MIR 74 136 -72 227 357 0 18 chr17 1999892 2000004 -83438476 + L3 LINE CR1 1443 1552 -25 2242 88 0 0 chr17 2000620 2000914 -83437566 - AluSp SINE Alu -18 295 2 403 315 0 0 chr17 2002099 2002533 -83435947 + (TG)n Simple_repeat Simple_repeat 1 434 0 659 184 15 167 chr17 2003158 2003298 -83435182 - MIR SINE MIR -1 261 183 2188 98 0 3 chr17 2003298 2003593 -83434887 + AluSx SINE Alu 1 294 -18 659 184 15 167 chr17 2003593 2003740 -83434740 - MIR SINE MIR -79 183 15 303 325 149 24 chr17 2003765 2004020 -83434460 + L2 LINE L2 3013 3299 -14 192 40 0 0 chr17 2004020 2004045 -83434435 + (TGAA)n Simple_repeat Simple_repeat 4 28 0 303 227 30 0 chr17 2004111 2004177 -83434303 + MIR SINE MIR 5 72 -190 989 198 160 55 chr17 2004178 2004521 -83433959 - MLT1G1 LTR MaLR 0 595 217 2122 117 0 7 chr17 2004530 2004837 -83433643 - AluSg SINE Alu -5 305 1 2237 101 0 0 chr17 2004839 2005135 -83433345 - AluSx SINE Alu -16 296 1 1674 198 36 51 chr17 2005948 2006363 -83432117 + LTR2 LTR ERV1 41 449 0 229 170 0 21 chr17 2006364 2006411 -83432069 + MIR SINE MIR 85 130 -78 2345 73 3 0 chr17 2006464 2006765 -83431715 - AluSq SINE Alu -11 302 1 353 301 58 0 chr17 2006776 2006879 -83431601 - MIR SINE MIR -68 140 32 2140 100 0 28 chr17 2007190 2007511 -83430969 - AluSx SINE Alu 0 312 1 2132 95 10 7 chr17 2007511 2007815 -83430665 - AluSx SINE Alu -7 305 1 1585 186 34 3 chr17 2007819 2008114 -83430366 - AluJo SINE Alu -2 310 7 2311 94 0 0 chr17 2008124 2008431 -83430049 - AluY SINE Alu -4 307 1 322 874 0 27 chr17 2008435 2008728 -83429752 - L1MC4a LINE L1 -232 5889 5542 2381 147 112 68 chr17 2008728 2008792 -83429688 - MLT2B1 LTR ERVL 0 520 460 195 42 0 0 chr17 2008792 2008816 -83429664 + (TG)n Simple_repeat Simple_repeat 2 25 0 2381 147 112 68 chr17 2008816 2008858 -83429622 - MLT2B1 LTR ERVL -60 460 421 1927 122 0 45 chr17 2008858 2009170 -83429310 - AluSx SINE Alu -10 302 5 2381 147 112 68 chr17 2009170 2009560 -83428920 - MLT2B1 LTR ERVL -99 421 1 322 874 0 27 chr17 2009560 2009578 -83428902 - L1MC4a LINE L1 -578 5543 5572 1804 123 39 7 chr17 2009627 2009911 -83428569 - AluJb SINE Alu -18 294 2 1738 114 0 70 chr17 2010078 2010376 -83428104 + AluSx SINE Alu 36 312 0 2125 101 7 23 chr17 2010675 2010983 -83427497 - AluSx SINE Alu -9 303 1 181 373 127 0 chr17 2011015 2011133 -83427347 - MIR3 SINE MIR -30 178 46 2103 118 0 0 chr17 2011490 2011786 -83426694 + AluSx SINE Alu 4 299 -13 407 276 135 0 chr17 2012120 2012276 -83426204 + MIR SINE MIR 79 255 -7 2290 106 0 0 chr17 2012413 2012724 -83425756 - AluSx SINE Alu -1 311 1 366 161 0 0 chr17 2012957 2013019 -83425461 - MIR SINE MIR -116 146 85 2361 87 0 0 chr17 2013718 2014018 -83424462 - AluSq SINE Alu -13 300 1 191 365 54 0 chr17 2014074 2014148 -83424332 + L2 LINE L2 3168 3245 -27 341 313 29 34 chr17 2014220 2014383 -83424097 - MLT1K LTR MaLR -4 584 421 2068 89 38 0 chr17 2014383 2014674 -83423806 + AluSx SINE Alu 1 302 -10 341 313 29 34 chr17 2014674 2014718 -83423762 - MLT1K LTR MaLR -167 421 378 2336 102 0 3 chr17 2015428 2015742 -83422738 - AluSq SINE Alu 0 313 1 183 288 51 17 chr17 2015889 2015948 -83422532 - L2 LINE L2 -21 3251 3191 219 318 6 35 chr17 2016324 2016494 -83421986 + (TG)n Simple_repeat Simple_repeat 1 165 0 213 238 0 0 chr17 2017443 2017523 -83420957 + (TG)n Simple_repeat Simple_repeat 1 80 0 186 150 0 0 chr17 2017606 2017646 -83420834 + (TG)n Simple_repeat Simple_repeat 1 40 0 222 234 234 0 chr17 2018831 2018925 -83419555 + L2 LINE L2 3147 3262 -10 328 358 20 35 chr17 2019456 2019657 -83418823 + MIR SINE MIR 11 208 -54 279 331 24 0 chr17 2020150 2020277 -83418203 + (ATGGTG)n Simple_repeat Simple_repeat 2 131 0 395 214 0 11 chr17 2020803 2020892 -83417588 + MIR SINE MIR 92 179 -83 2289 107 0 0 chr17 2021404 2021712 -83416768 - AluSc SINE Alu -1 308 1 2338 95 0 0 chr17 2021757 2022061 -83416419 + AluSx SINE Alu 1 304 -8 474 18 0 0 chr17 2022159 2022214 -83416266 + (TG)n Simple_repeat Simple_repeat 1 55 0 609 202 82 109 chr17 2022396 2022567 -83415913 + L1MC5 LINE L1 7548 7722 -239 1579 144 7 22 chr17 2022567 2022837 -83415643 - AluJb SINE Alu -46 266 1 609 202 82 109 chr17 2022837 2023041 -83415439 + L1MC5 LINE L1 7722 7913 -48 2146 110 0 0 chr17 2023355 2023645 -83414835 - AluSx SINE Alu -22 290 1 1567 216 37 41 chr17 2025457 2025549 -83412931 + MER113 DNA MER1_type? 17 108 -413 1898 115 3 11 chr17 2025549 2025835 -83412645 + AluSx SINE Alu 1 284 -28 208 0 0 0 chr17 2025835 2025858 -83412622 + (TAAA)n Simple_repeat Simple_repeat 2 136 0 1567 216 37 41 chr17 2025858 2026227 -83412253 + MER113 DNA MER1_type? 108 477 -44 262 140 21 97 chr17 2027477 2027579 -83410901 + C-rich Low_complexity Low_complexity 1 94 0 22 70 0 0 chr17 2027666 2027709 -83410771 + GC_rich Low_complexity Low_complexity 1 43 0 49 76 0 0 chr17 2027725 2027830 -83410650 + GC_rich Low_complexity Low_complexity 1 105 0 237 239 18 46 chr17 2027897 2028006 -83410474 + C-rich Low_complexity Low_complexity 3 108 0 205 186 0 0 chr17 2028830 2028873 -83409607 + T-rich Low_complexity Low_complexity 2 44 0 210 37 0 0 chr17 2029108 2029135 -83409345 + (CCCCCA)n Simple_repeat Simple_repeat 4 30 0 778 85 0 77 chr17 2029592 2029722 -83408758 + FLAM_C SINE Alu 11 130 -13 769 242 128 33 chr17 2030272 2030377 -83408103 + MER113 DNA MER1_type? 1 95 -426 2111 105 13 0 chr17 2030377 2030683 -83407797 - AluSq SINE Alu -3 310 1 2292 79 0 7 chr17 2030692 2030996 -83407484 - AluY SINE Alu -9 302 1 769 242 128 33 chr17 2030996 2031163 -83407317 + MER113 DNA MER1_type? 102 252 -269 2512 50 0 0 chr17 2031163 2031463 -83407017 + AluY SINE Alu 1 300 -11 769 242 128 33 chr17 2031463 2031568 -83406912 + MER113 DNA MER1_type? 252 426 -95 2105 108 3 13 chr17 2032649 2032964 -83405516 + AluSx SINE Alu 1 312 0 2344 70 0 0 chr17 2034157 2034459 -83404021 + AluSg SINE Alu 2 303 -7 643 308 25 5 chr17 2034629 2034827 -83403653 + MIR SINE MIR 1 202 -60 1165 129 0 6 chr17 2034865 2035058 -83403422 + AluSg/x SINE Alu 113 304 0 710 227 178 58 chr17 2035060 2035260 -83403220 + L1ME2 LINE L1 5722 5897 -267 2017 126 0 3 chr17 2035260 2035561 -83402919 - AluSg SINE Alu -10 300 1 2047 111 0 0 chr17 2035569 2035882 -83402598 - AluSg SINE Alu 0 313 1 710 227 178 58 chr17 2035882 2036036 -83402444 + L1ME2 LINE L1 5903 6130 -34 2149 103 0 0 chr17 2036037 2036329 -83402151 + AluSx SINE Alu 18 309 -3 2354 80 0 0 chr17 2037143 2037454 -83401026 + AluY SINE Alu 1 311 0 2219 93 7 3 chr17 2037876 2038178 -83400302 + AluSx SINE Alu 1 303 -9 269 294 59 112 chr17 2038219 2038505 -83399975 + L2 LINE L2 3025 3295 -18 216 208 75 0 chr17 2038510 2038563 -83399917 + GA-rich Low_complexity Low_complexity 1 57 0 2210 66 0 0 chr17 2038910 2039182 -83399298 - AluSx SINE Alu -7 305 34 2373 60 0 10 chr17 2039857 2040159 -83398321 + AluY SINE Alu 1 299 -12 22 0 0 0 chr17 2040249 2040271 -83398209 + AT_rich Low_complexity Low_complexity 1 22 0 1140 123 0 0 chr17 2040280 2040450 -83398030 - AluSq SINE Alu -3 310 141 2087 115 0 0 chr17 2040452 2040747 -83397733 - AluJb SINE Alu -17 295 1 661 154 89 8 chr17 2040815 2040938 -83397542 + FLAM_A SINE Alu 1 133 0 1733 185 70 108 chr17 2040963 2041000 -83397480 + L1MC3 LINE L1 7174 7211 -574 2022 110 3 31 chr17 2041000 2041319 -83397161 + AluSx SINE Alu 1 310 -2 1733 185 70 108 chr17 2041319 2041427 -83397053 + L1MC3 LINE L1 7211 7322 -463 1878 66 8 0 chr17 2041427 2041669 -83396811 + AluSp SINE Alu 63 306 -7 1733 185 70 108 chr17 2041669 2042122 -83396358 + L1MC3 LINE L1 7322 7750 -35 2182 110 0 22 chr17 2042123 2042442 -83396038 - AluSx SINE Alu 0 312 1 1091 188 21 52 chr17 2042478 2042766 -83395714 + MER113 DNA MER1_type? 200 478 -43 2307 97 0 3 chr17 2043145 2043456 -83395024 + AluSg SINE Alu 1 310 0 311 307 11 0 chr17 2043468 2043556 -83394924 - MIR SINE MIR -112 150 62 2254 93 0 0 chr17 2043557 2043858 -83394622 + AluY SINE Alu 1 301 -10 882 270 34 142 chr17 2044003 2044192 -83394288 + MLT1K LTR MaLR 16 224 -364 1850 160 0 0 chr17 2044192 2044485 -83393995 - AluJb SINE Alu -10 302 10 882 270 34 142 chr17 2044485 2044795 -83393685 + MLT1K LTR MaLR 224 439 -149 1911 138 0 0 chr17 2044795 2045113 -83393367 - AluSx SINE Alu 0 318 1 882 270 34 142 chr17 2045113 2045230 -83393250 + MLT1K LTR MaLR 439 567 -21 860 163 36 24 chr17 2045726 2045892 -83392588 - AluJo SINE Alu -22 290 123 2183 78 0 3 chr17 2045950 2046232 -83392248 + AluSx SINE Alu 9 289 -23 2154 103 0 10 chr17 2046241 2046543 -83391937 + AluY SINE Alu 1 299 -12 183 42 0 0 chr17 2046547 2046571 -83391909 + (TTTAA)n Simple_repeat Simple_repeat 1 24 0 1870 161 0 0 chr17 2046654 2046940 -83391540 - AluJb SINE Alu -18 294 9 390 277 28 74 chr17 2047607 2047746 -83390734 + L1ME3 LINE L1 5565 5709 -457 2001 53 0 0 chr17 2047746 2047991 -83390489 - AluY SINE Alu -3 308 64 390 277 28 74 chr17 2047991 2048026 -83390454 + L1ME3 LINE L1 5709 5744 -422 2218 79 21 0 chr17 2048026 2048317 -83390163 + AluSx SINE Alu 1 297 -15 390 277 28 74 chr17 2048317 2048435 -83390045 + L1ME3 LINE L1 5744 5850 -316 1917 122 13 10 chr17 2048464 2048768 -83389712 - AluSx SINE Alu -7 305 1 2500 59 0 0 chr17 2048879 2049186 -83389294 - AluY SINE Alu -4 307 1 2266 105 0 0 chr17 2049234 2049539 -83388941 - AluSg SINE Alu -5 305 1 1651 169 13 26 chr17 2049541 2049854 -83388626 - AluJo SINE Alu -3 309 1 248 217 130 99 chr17 2049925 2050086 -83388394 + L1MC4a LINE L1 5780 5945 -1863 2180 112 7 0 chr17 2050086 2050390 -83388090 + AluSx SINE Alu 1 306 -6 779 125 7 0 chr17 2050465 2050601 -83387879 + (GGGGA)n Simple_repeat Simple_repeat 1 137 0 2308 61 0 10 chr17 2050779 2051096 -83387384 - AluSc SINE Alu 0 309 1 2001 92 0 18 chr17 2051097 2051379 -83387101 - AluSx SINE Alu -14 298 22 541 151 0 0 chr17 2051438 2051524 -83386956 + L1MB1 LINE L1 6082 6167 -1 783 197 0 0 chr17 2051579 2051711 -83386769 + FLAM_C SINE Alu 2 133 0 2262 80 10 3 chr17 2052246 2052545 -83385935 + AluSx SINE Alu 1 301 -11 292 197 68 68 chr17 2052983 2053100 -83385380 + L2 LINE L2 2920 3036 -277 2317 84 7 0 chr17 2053163 2053471 -83385009 - AluSx SINE Alu -2 310 1 1315 78 0 0 chr17 2053837 2054004 -83384476 - AluSx SINE Alu -145 167 1 329 309 81 51 chr17 2054004 2054240 -83384240 + L2 LINE L2 3021 3263 -50 2232 110 0 0 chr17 2054496 2054804 -83383676 - AluSc SINE Alu -1 308 1 2122 95 0 46 chr17 2055235 2055560 -83382920 + AluY SINE Alu 1 310 -1 794 233 23 7 chr17 2055807 2056014 -83382466 - MIR SINE MIR -20 242 34 213 254 14 56 chr17 2056000 2056071 -83382409 + L2 LINE L2 3245 3312 -1 * 1518 173 50 11 chr17 2056301 2056579 -83381901 + AluJo SINE Alu 6 294 -18 2459 69 10 0 chr17 2056762 2057067 -83381413 - AluSp SINE Alu -3 310 3 2218 102 3 0 chr17 2057069 2057364 -83381116 - AluSx SINE Alu -16 296 1 2497 58 7 0 chr17 2057379 2057688 -83380792 - AluY SINE Alu 0 311 1 932 81 35 152 chr17 2058513 2058659 -83379821 - AluSx SINE Alu -128 184 65 1314 25 12 6 chr17 2058659 2058822 -83379658 + L1PA4 LINE L1 5992 6155 0 932 81 35 152 chr17 2058822 2058872 -83379608 - AluSx SINE Alu -247 65 11 237 33 0 0 chr17 2058879 2058909 -83379571 + (A)n Simple_repeat Simple_repeat 1 30 0 1443 181 18 18 chr17 2058909 2059190 -83379290 - AluJo SINE Alu -31 281 1 928 150 33 56 chr17 2059673 2059853 -83378627 + MER3 DNA MER1_type 1 129 -80 1973 133 7 0 chr17 2059856 2060156 -83378324 + AluJb SINE Alu 1 302 -10 410 181 150 16 chr17 2060158 2060285 -83378195 + L1ME4a LINE L1 5975 6118 -3 1663 96 57 57 chr17 2060495 2060796 -83377684 + AluSg SINE Alu 1 301 0 344 305 114 55 chr17 2060821 2060891 -83377589 + L1MC/D LINE L1 5485 5549 -573 2108 93 10 3 chr17 2060891 2061191 -83377289 - AluSq SINE Alu -11 302 1 344 305 114 55 chr17 2061191 2061442 -83377038 + L1MC/D LINE L1 5549 5820 -302 1484 181 60 17 chr17 2061449 2061748 -83376732 + AluJb SINE Alu 1 312 0 2073 97 28 0 chr17 2061764 2062053 -83376427 + AluSx SINE Alu 3 299 -13 942 141 58 0 chr17 2062055 2062211 -83376269 + AluSg/x SINE Alu 140 304 -6 2335 65 0 7 chr17 2062215 2062507 -83375973 + AluY SINE Alu 6 295 -16 771 278 17 30 chr17 2062549 2062783 -83375697 - MIR SINE MIR 0 262 32 2130 71 18 14 chr17 2062902 2063236 -83375244 + AluSx SINE Alu 1 335 0 2230 99 3 0 chr17 2063394 2063698 -83374782 + AluY SINE Alu 1 305 -6 2162 108 3 0 chr17 2063709 2064005 -83374475 + AluSq SINE Alu 1 297 -16 3119 179 17 22 chr17 2064006 2064236 -83374244 + L1MB3 LINE L1 5600 5830 -353 2029 130 0 19 chr17 2064236 2064552 -83373928 + AluSx SINE Alu 1 310 -2 3119 179 17 22 chr17 2064552 2064908 -83373572 + L1MB3 LINE L1 5830 6183 0 2206 71 0 3 chr17 2064914 2065196 -83373284 + AluSx SINE Alu 24 304 -8 2238 82 0 0 chr17 2065748 2066073 -83372407 + AluSx SINE Alu 1 325 0 622 188 100 35 chr17 2066094 2066264 -83372216 - MIR SINE MIR -11 251 71 336 278 45 65 chr17 2066310 2066499 -83371981 + MER5A DNA MER1_type 1 175 -3 439 189 78 0 chr17 2067273 2067363 -83371117 - MIR SINE MIR -138 124 28 593 208 39 101 chr17 2067465 2067537 -83370943 + MER20 DNA MER1_type 1 76 -143 2209 83 16 19 chr17 2067537 2067850 -83370630 - AluSx SINE Alu 0 312 1 593 208 39 101 chr17 2067850 2067984 -83370496 + MER20 DNA MER1_type 76 194 -25 641 203 5 107 chr17 2068099 2068159 -83370321 - MER5B DNA MER1_type -1 177 113 2043 98 0 17 chr17 2068159 2068454 -83370026 + AluSg SINE Alu 5 294 -16 641 203 5 107 chr17 2068454 2068524 -83369956 - MER5B DNA MER1_type -65 113 71 2328 94 0 0 chr17 2068524 2068822 -83369658 - AluSq SINE Alu -15 298 1 641 203 5 107 chr17 2068822 2068887 -83369593 - MER5B DNA MER1_type -107 71 1 1029 96 0 0 chr17 2069515 2069651 -83368829 + AluSq/x SINE Alu 1 136 -176 2268 95 0 3 chr17 2069651 2069956 -83368524 + AluSx SINE Alu 1 304 -8 226 202 30 81 chr17 2070143 2070242 -83368238 + MIR SINE MIR 59 152 -56 453 290 77 80 chr17 2070390 2070701 -83367779 + L3 LINE CR1 1215 1525 -52 2475 72 0 0 chr17 2070701 2071007 -83367473 + AluSg SINE Alu 1 306 -4 1308 56 0 0 chr17 2071007 2071169 -83367311 + L1PA4 LINE L1 5994 6155 0 453 290 77 80 chr17 2071169 2071218 -83367262 + L3 LINE CR1 1523 1575 -2 1196 208 77 19 chr17 2073311 2073623 -83364857 - MER61B LTR ERV1 0 425 1 1091 72 0 0 chr17 2074333 2074472 -83364008 + AluSq/x SINE Alu 1 139 -173 1394 141 133 16 chr17 2074546 2074833 -83363647 + AluSx SINE Alu 1 317 0 2003 104 0 14 chr17 2074833 2075153 -83363327 + AluSx SINE Alu 1 316 0 192 135 0 0 chr17 2075746 2075783 -83362697 + (CA)n Simple_repeat Simple_repeat 2 38 0 2018 106 17 3 chr17 2075857 2075988 -83362492 + AluSx SINE Alu 1 129 -183 198 0 0 0 chr17 2075988 2076010 -83362470 + (TAA)n Simple_repeat Simple_repeat 2 23 0 2018 106 17 3 chr17 2076010 2076170 -83362310 + AluSx SINE Alu 129 296 -16 396 283 53 0 chr17 2076391 2076504 -83361976 - L2 LINE L2 -1 3312 3194 342 196 134 31 chr17 2076593 2076690 -83361790 - MIR3 SINE MIR -7 201 95 506 339 86 5 chr17 2077064 2077250 -83361230 + MIR SINE MIR 47 247 -15 782 254 68 36 chr17 2077499 2077616 -83360864 - L1M4 LINE L1 -1290 4856 4744 1948 142 0 0 chr17 2077616 2077933 -83360547 - AluSx SINE Alu 0 317 1 782 254 68 36 chr17 2077933 2078066 -83360414 - L1M4 LINE L1 -1402 4744 4597 283 260 13 0 chr17 2078156 2078233 -83360247 + MLT1K LTR MaLR 509 586 -2 237 278 0 42 chr17 2078569 2078641 -83359839 - MIR SINE MIR -109 153 85 205 277 15 15 chr17 2078723 2078788 -83359692 + L2 LINE L2 2995 3059 -213 2012 108 28 3 chr17 2078816 2079102 -83359378 - AluSq SINE Alu -20 293 1 423 0 0 0 chr17 2079882 2079929 -83358551 + (CA)n Simple_repeat Simple_repeat 1 47 0 2368 92 0 0 chr17 2080027 2080332 -83358148 - AluSx SINE Alu -7 305 1 2297 107 0 0 chr17 2080377 2080686 -83357794 + AluSc SINE Alu 1 309 0 395 214 0 11 chr17 2081194 2081283 -83357197 - MIR SINE MIR -83 179 92 279 331 24 0 chr17 2081809 2081936 -83356544 + (CACCAT)n Simple_repeat Simple_repeat 2 131 0 328 358 20 35 chr17 2082429 2082630 -83355850 - MIR SINE MIR -54 208 11 223 226 208 28 chr17 2083161 2083267 -83355213 - L2 LINE L2 -10 3262 3138 186 150 0 0 chr17 2084440 2084480 -83354000 + (CA)n Simple_repeat Simple_repeat 1 40 0 213 238 0 0 chr17 2084563 2084643 -83353837 + (CA)n Simple_repeat Simple_repeat 1 80 0 219 318 6 35 chr17 2085592 2085762 -83352718 + (CA)n Simple_repeat Simple_repeat 1 165 0 183 288 51 17 chr17 2086138 2086197 -83352283 + L2 LINE L2 3191 3251 -21 2302 105 0 3 chr17 2086344 2086658 -83351822 + AluSq SINE Alu 1 313 0 355 308 29 34 chr17 2087366 2087410 -83351070 + MLT1K LTR MaLR 378 421 -167 2077 89 38 0 chr17 2087410 2087702 -83350778 - AluSx SINE Alu -9 303 1 355 308 29 34 chr17 2087702 2087865 -83350615 + MLT1K LTR MaLR 421 584 -4 191 365 54 0 chr17 2087937 2088011 -83350469 - L2 LINE L2 -27 3245 3168 2373 83 0 0 chr17 2088067 2088367 -83350113 + AluSq SINE Alu 1 300 -13 366 161 0 0 chr17 2089066 2089128 -83349352 + MIR SINE MIR 85 146 -116 2258 107 3 0 chr17 2089361 2089671 -83348809 + AluSx SINE Alu 1 311 -1 407 276 135 0 chr17 2089808 2089964 -83348516 - MIR SINE MIR -7 255 79 2103 118 0 0 chr17 2090298 2090594 -83347886 - AluSx SINE Alu -13 299 4 181 373 127 0 chr17 2090951 2091069 -83347411 + MIR3 SINE MIR 46 178 -30 2138 97 7 23 chr17 2091101 2091409 -83347071 + AluSx SINE Alu 1 303 -9 1724 117 0 70 chr17 2091709 2092007 -83346473 - AluSx SINE Alu 0 312 36 1804 123 39 7 chr17 2092174 2092458 -83346022 + AluJb SINE Alu 2 294 -18 322 874 0 27 chr17 2092507 2092525 -83345955 + L1MC4a LINE L1 5572 5592 -529 2381 147 112 68 chr17 2092525 2092915 -83345565 + MLT2B1 LTR ERVL 1 372 -148 1927 122 0 45 chr17 2092915 2093227 -83345253 + AluSx SINE Alu 5 302 -10 2381 147 112 68 chr17 2093227 2093269 -83345211 + MLT2B1 LTR ERVL 372 411 -109 195 42 0 0 chr17 2093269 2093293 -83345187 + (CA)n Simple_repeat Simple_repeat 2 25 0 2381 147 112 68 chr17 2093293 2093357 -83345123 + MLT2B1 LTR ERVL 411 520 0 322 874 0 27 chr17 2093357 2093650 -83344830 + L1MC4a LINE L1 5592 5889 -232 2311 94 0 0 chr17 2093654 2093961 -83344519 + AluY SINE Alu 1 307 -4 1585 186 34 3 chr17 2093971 2094266 -83344214 + AluJo SINE Alu 7 310 -2 2116 96 10 7 chr17 2094270 2094572 -83343908 + AluSx SINE Alu 1 303 -9 2118 103 0 28 chr17 2094572 2094893 -83343587 + AluSx SINE Alu 1 312 0 836 218 154 3 chr17 2095201 2095494 -83342986 - L1ME LINE L1 -567 5597 5261 2451 72 0 0 chr17 2095503 2095809 -83342671 - AluY SINE Alu -5 306 1 2317 91 0 0 chr17 2095811 2096109 -83342371 - AluSg SINE Alu -12 298 1 692 167 15 38 chr17 2096109 2096241 -83342239 - AluJo/FLAM SINE Alu -173 129 1 2057 129 0 13 chr17 2096243 2096554 -83341926 - AluJb SINE Alu -5 307 1 990 221 50 31 chr17 2096556 2096714 -83341766 - L1ME LINE L1 -947 5199 5046 2191 102 0 13 chr17 2096714 2097019 -83341461 - AluSc SINE Alu -8 301 1 990 221 50 31 chr17 2097019 2097217 -83341263 - L1ME LINE L1 -1100 5046 4836 754 306 5 0 chr17 2097265 2097461 -83341019 - MER117 DNA MER1_type 0 197 1 351 212 71 62 chr17 2097464 2097577 -83340903 - MIR SINE MIR -135 127 14 232 363 109 16 chr17 2097551 2097744 -83340736 + MIR SINE MIR 32 242 -20 * 2105 81 3 47 chr17 2098212 2098532 -83339948 - AluSq SINE Alu 0 307 1 364 271 102 0 chr17 2098533 2098651 -83339829 + MIR SINE MIR 63 192 -70 1014 238 109 55 chr17 2099408 2099518 -83338962 - LTR56 LTR ERV1 -1 444 341 2186 115 0 3 chr17 2099518 2099823 -83338657 - AluSx SINE Alu -8 304 1 1014 238 109 55 chr17 2099823 2100133 -83338347 - LTR56 LTR ERV1 -104 341 1 269 343 0 19 chr17 2100261 2100366 -83338114 + L2 LINE L2 2304 2406 -908 2225 75 0 0 chr17 2100379 2100693 -83337787 - AluY SINE Alu 0 314 1 2602 142 8 62 chr17 2100703 2101339 -83337141 - MER4B LTR ERV1 0 779 2 2386 75 7 0 chr17 2101340 2101645 -83336835 - AluSp SINE Alu -6 307 1 793 335 23 0 chr17 2101656 2101916 -83336564 + L2 LINE L2 2480 2745 -569 1987 107 0 11 chr17 2101922 2102193 -83336287 + AluSx SINE Alu 1 268 -44 341 371 54 5 chr17 2102236 2102422 -83336058 - L2 LINE L2 -530 2784 2590 186 197 224 0 chr17 2102560 2102636 -83335844 - MER5A DNA MER1_type -93 96 4 307 280 229 0 chr17 2102683 2102840 -83335640 - L2 LINE L2 -896 2418 2226 502 363 14 5 chr17 2103248 2103471 -83335009 + MIR SINE MIR 34 258 -4 2118 123 0 0 chr17 2103570 2103871 -83334609 - AluSq SINE Alu -12 301 1 922 191 7 0 chr17 2103973 2104232 -83334248 + L1MA4 LINE L1 5172 5432 -743 * 1106 171 19 0 chr17 2104225 2104435 -83334045 - L1M4 LINE L1 -493 5691 5478 5152 131 30 15 chr17 2104473 2104952 -83333528 + L1MA4 LINE L1 5430 5928 -372 2240 92 16 3 chr17 2104952 2105258 -83333222 + AluSx SINE Alu 1 310 -2 5152 131 30 15 chr17 2105258 2105626 -83332854 + L1MA4 LINE L1 5928 6289 -11 291 228 22 33 chr17 2105721 2105813 -83332667 - L2 LINE L2 -182 3090 3000 247 308 239 0 chr17 2106529 2106646 -83331834 - MIR3 SINE MIR -22 186 42 1430 174 0 8 chr17 2107165 2107412 -83331068 - AluJb SINE Alu -26 286 42 542 333 4 71 chr17 2107530 2107601 -83330879 + MIR SINE MIR 1 75 -187 2084 86 18 0 chr17 2107601 2107900 -83330580 - AluSg SINE Alu 0 304 1 542 333 4 71 chr17 2107900 2108082 -83330398 + MIR SINE MIR 75 238 -24 348 24 0 0 chr17 2108727 2108768 -83329712 + (CA)n Simple_repeat Simple_repeat 1 41 0 214 214 0 0 chr17 2108920 2108962 -83329518 - MIR SINE MIR -110 152 111 367 252 48 0 chr17 2108972 2109075 -83329405 + MIR SINE MIR 81 188 -74 432 323 117 68 chr17 2109747 2109995 -83328485 + MIR SINE MIR 3 262 0 317 314 191 0 chr17 2110379 2110615 -83327865 + MLT1L LTR MaLR 218 498 -117 2152 101 0 13 chr17 2110849 2111147 -83327333 - AluSg SINE Alu -16 294 1 22 0 0 0 chr17 2111657 2111679 -83326801 + AT_rich Low_complexity Low_complexity 1 22 0 544 167 0 0 chr17 2111679 2111763 -83326717 - FLAM_C SINE Alu -25 118 35 2189 92 7 23 chr17 2111830 2112136 -83326344 + AluSx SINE Alu 1 301 -11 1099 194 45 4 chr17 2112228 2112475 -83326005 + MER7A DNA MER2_type 1 255 -91 321 197 58 88 chr17 2112492 2112629 -83325851 + MER7A DNA MER2_type 214 346 0 303 308 121 11 chr17 2112680 2112862 -83325618 - MIR SINE MIR -29 233 32 246 105 0 0 chr17 2112972 2113010 -83325470 + (A)n Simple_repeat Simple_repeat 1 38 0 210 37 0 0 chr17 2113986 2114013 -83324467 + (T)n Simple_repeat Simple_repeat 1 27 0 1369 105 51 39 chr17 2114160 2114417 -83324063 + AluSq SINE Alu 46 305 -8 2354 79 0 19 chr17 2114799 2115117 -83323363 + AluSx SINE Alu 1 312 0 2424 62 7 0 chr17 2115661 2115967 -83322513 - AluSc SINE Alu -1 308 1 400 331 51 11 chr17 2116741 2116916 -83321564 - MIR SINE MIR 0 262 81 213 380 26 9 chr17 2117029 2117142 -83321338 + MIR SINE MIR 23 137 -71 368 302 0 0 chr17 2117261 2117357 -83321123 - L3 LINE CR1 -78 1499 1404 548 330 90 67 chr17 2118192 2119290 -83319190 + L2 LINE L2 2131 3258 -14 2384 75 0 0 chr17 2119294 2119588 -83318892 + AluY SINE Alu 1 294 -17 2310 93 0 10 chr17 2119597 2119908 -83318572 + AluSx SINE Alu 1 308 -4 226 286 88 23 chr17 2120971 2121131 -83317349 - MIR SINE MIR -70 192 23 213 219 109 78 chr17 2121203 2121267 -83317213 + MER5A DNA MER1_type 59 124 -65 209 311 118 37 chr17 2122841 2123002 -83315478 + MIR SINE MIR 65 238 -24 453 203 142 14 chr17 2123154 2123302 -83315178 - MIR3 SINE MIR -15 193 27 2158 112 13 0 chr17 2123766 2124069 -83314411 + AluSg SINE Alu 1 307 -3 2234 104 0 3 chr17 2125778 2126085 -83312395 + AluSx SINE Alu 1 306 -6 270 95 0 0 chr17 2126202 2126244 -83312236 + (TTTTG)n Simple_repeat Simple_repeat 2 43 0 838 127 0 0 chr17 2126244 2126362 -83312118 - FLAM_C SINE Alu -25 118 1 2071 116 30 3 chr17 2128075 2128376 -83310104 - AluSg SINE Alu -1 309 1 509 202 0 0 chr17 2128954 2129048 -83309432 + FRAM SINE Alu 68 161 -15 255 320 0 13 chr17 2129158 2129233 -83309247 - MIR SINE MIR -12 250 177 370 268 183 0 chr17 2130022 2130187 -83308293 - MIR SINE MIR -60 148 6 262 395 0 0 chr17 2130185 2130320 -83308160 + MIR SINE MIR 31 140 -68 * 2202 75 0 4 chr17 2130912 2131191 -83307289 + AluSq SINE Alu 1 278 -35 231 36 0 0 chr17 2131191 2131219 -83307261 + (CAAT)n Simple_repeat Simple_repeat 3 30 0 488 307 84 6 chr17 2131766 2131932 -83306548 + MIR3 SINE MIR 5 183 -25 235 198 88 77 chr17 2131939 2131972 -83306508 + HsTC2 DNA Tc2 1 32 -1866 1692 159 0 36 chr17 2131972 2132274 -83306206 - AluJb SINE Alu -21 291 1 235 198 88 77 chr17 2132274 2132331 -83306149 + HsTC2 DNA Tc2 32 92 -1806 200 59 29 0 chr17 2132419 2132453 -83306027 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 2115 96 0 7 chr17 2132455 2132735 -83305745 - AluSc SINE Alu -31 278 1 609 210 11 81 chr17 2132736 2132792 -83305688 - MIR SINE MIR -65 197 139 2041 101 7 42 chr17 2132792 2133098 -83305382 - AluSg SINE Alu -15 295 1 609 210 11 81 chr17 2133098 2133227 -83305253 - MIR SINE MIR -123 139 25 223 279 29 0 chr17 2133236 2133304 -83305176 + GA-rich Low_complexity Low_complexity 5 74 0 232 271 0 0 chr17 2133306 2133354 -83305126 - L2 LINE L2 -15 3257 3210 226 165 0 196 chr17 2133484 2133581 -83304899 - L1M3 LINE L1 -653 5527 5450 2346 89 0 0 chr17 2133586 2133889 -83304591 - AluY SINE Alu -8 303 1 1557 110 0 13 chr17 2133889 2134063 -83304417 - AluSg/x SINE Alu -5 307 135 2056 125 0 3 chr17 2134063 2134359 -83304121 - AluSg SINE Alu -15 295 1 1557 110 0 13 chr17 2134359 2134411 -83304069 - AluSg/x SINE Alu -177 135 84 299 295 19 38 chr17 2134597 2134702 -83303778 + L2 LINE L2 3208 3310 -3 226 286 29 0 chr17 2135293 2135363 -83303117 + CT-rich Low_complexity Low_complexity 1 72 0 306 350 0 8 chr17 2136122 2136139 -83302341 + MIR SINE MIR 22 38 -224 2285 95 0 3 chr17 2136139 2136443 -83302037 - AluSx SINE Alu -9 303 1 306 350 0 8 chr17 2136443 2136542 -83301938 + MIR SINE MIR 38 137 -125 207 273 82 45 chr17 2136657 2136767 -83301713 - L2 LINE L2 -12 3301 3188 2421 65 3 3 chr17 2136791 2137100 -83301380 - AluSg SINE Alu 0 310 2 243 0 0 0 chr17 2137905 2137932 -83300548 + (TG)n Simple_repeat Simple_repeat 2 28 0 2270 103 0 0 chr17 2137941 2138241 -83300239 - AluSx SINE Alu -12 300 1 23 33 0 0 chr17 2138246 2138276 -83300204 + AT_rich Low_complexity Low_complexity 1 30 0 807 222 5 31 chr17 2138621 2138815 -83299665 + MIR SINE MIR 47 235 -27 1830 138 46 0 chr17 2138844 2139127 -83299353 - AluSx SINE Alu -16 296 1 2284 85 3 3 chr17 2139147 2139442 -83299038 - AluSq SINE Alu -16 297 3 2114 126 3 0 chr17 2139442 2139743 -83298737 - AluSx SINE Alu -10 302 1 4337 163 29 12 chr17 2139904 2140411 -83298069 - L1MA5 LINE L1 -4 6296 5770 1989 113 12 41 chr17 2140411 2140731 -83297749 - AluSx SINE Alu -1 311 1 4337 163 29 12 chr17 2140731 2140980 -83297500 - L1MA5 LINE L1 -530 5770 5527 2151 93 0 17 chr17 2141450 2141623 -83296857 - AluSx SINE Alu -10 302 135 249 108 0 0 chr17 2141623 2141660 -83296820 + (TA)n Simple_repeat Simple_repeat 2 38 0 2151 93 0 17 chr17 2141660 2141787 -83296693 - AluSx SINE Alu -177 135 7 468 175 34 73 chr17 2142425 2142450 -83296030 - HAL1 LINE L1 -335 2172 2148 2453 62 0 7 chr17 2142450 2142755 -83295725 - AluY SINE Alu -8 303 1 468 175 34 73 chr17 2142755 2142906 -83295574 - HAL1 LINE L1 -359 2148 2003 1833 174 23 0 chr17 2142906 2143210 -83295270 - AluJo SINE Alu -1 311 1 1132 224 74 55 chr17 2143371 2143580 -83294900 - HAL1 LINE L1 -809 1698 1494 2349 96 0 3 chr17 2143580 2143893 -83294587 - AluSx SINE Alu 0 312 1 1132 224 74 55 chr17 2143893 2144103 -83294377 - HAL1 LINE L1 -1013 1494 1271 681 277 49 71 chr17 2144110 2144618 -83293862 - MLT1G LTR MaLR -51 539 38 263 229 169 0 chr17 2144653 2144771 -83293709 - HAL1 LINE L1 -1254 1253 1116 2266 83 0 40 chr17 2144784 2145110 -83293370 - AluSq SINE Alu 0 313 1 251 253 12 24 chr17 2145110 2145193 -83293287 - HAL1 LINE L1 -2425 82 1 906 101 0 0 chr17 2145777 2145896 -83292584 + AluSq/x SINE Alu 15 133 -180 2069 114 0 26 chr17 2145909 2146215 -83292265 + AluSx SINE Alu 1 298 -14 364 270 9 18 chr17 2146848 2146959 -83291521 + MER113 DNA MER1_type? 84 193 -328 627 288 83 0 chr17 2147105 2147310 -83291170 + MIR SINE MIR 2 223 -39 2239 82 0 3 chr17 2147355 2147647 -83290833 - AluSx SINE Alu -21 291 1 242 322 42 17 chr17 2148184 2148302 -83290178 + MIR SINE MIR 20 140 -68 2197 116 0 3 chr17 2148824 2149135 -83289345 + AluSq SINE Alu 1 310 -3 1534 102 204 8 chr17 2149184 2149429 -83289051 - AluSg1 SINE Alu -16 293 1 1980 130 31 0 chr17 2149689 2149981 -83288499 - AluJb SINE Alu -11 301 1 461 293 140 0 chr17 2150543 2150700 -83287780 - MIR SINE MIR -26 236 58 948 212 9 4 chr17 2150714 2150944 -83287536 - L1MB7 LINE L1 -158 6026 5801 2108 73 3 28 chr17 2150962 2151280 -83287200 - AluY SINE Alu 0 311 1 2074 114 3 3 chr17 2151282 2151572 -83286908 - AluSx SINE Alu -14 298 9 22 35 0 0 chr17 2151581 2151610 -83286870 + AT_rich Low_complexity Low_complexity 1 29 0 547 236 0 0 chr17 2151610 2151737 -83286743 - L1MB7 LINE L1 -355 5829 5703 180 0 0 0 chr17 2152134 2152154 -83286326 + (CAT)n Simple_repeat Simple_repeat 2 21 0 23 0 0 0 chr17 2152196 2152219 -83286261 + AT_rich Low_complexity Low_complexity 1 23 0 2283 76 0 0 chr17 2152221 2152511 -83285969 - AluSq SINE Alu -23 290 1 431 228 60 54 chr17 2152534 2152683 -83285797 - MIR SINE MIR -103 159 10 880 241 55 8 chr17 2153707 2153964 -83284516 - MLT1C LTR MaLR 0 467 199 2156 116 0 7 chr17 2153987 2154288 -83284192 - AluSx SINE Alu -13 299 1 354 45 0 0 chr17 2156300 2156344 -83282136 + (TG)n Simple_repeat Simple_repeat 1 44 0 590 249 133 0 chr17 2156427 2156592 -83281888 - MER5A DNA MER1_type -2 187 1 2222 97 0 3 chr17 2156652 2156952 -83281528 - AluSq SINE Alu -14 299 1 240 86 0 0 chr17 2157853 2157888 -83280592 + (TCCC)n Simple_repeat Simple_repeat 3 37 0 1375 254 178 6 chr17 2158619 2159120 -83279360 - MLT1K LTR MaLR 0 588 2 431 263 9 171 chr17 2159124 2159470 -83279010 - L2 LINE L2 -25 3247 2958 519 301 75 0 chr17 2159475 2159582 -83278898 + MER5A DNA MER1_type 4 130 -59 2278 75 3 0 chr17 2159582 2159875 -83278605 - AluSg SINE Alu -16 294 1 519 301 75 0 chr17 2159875 2159940 -83278540 + MER5A DNA MER1_type 130 189 0 754 311 179 19 chr17 2159994 2160498 -83277982 - L2 LINE L2 -410 2904 2482 1507 187 33 0 chr17 2160498 2160771 -83277709 - AluJo SINE Alu -25 287 6 754 311 179 19 chr17 2160771 2161005 -83277475 - L2 LINE L2 -832 2482 2048 489 293 138 0 chr17 2261278 2261459 -83177021 + MIR SINE MIR 50 255 -7 230 229 114 14 chr17 2261450 2261520 -83176960 - MIR SINE MIR -95 113 37 * 268 303 55 9 chr17 2261900 2262009 -83176471 - L2 LINE L2 -25 3247 3134 23 0 0 0 chr17 2262554 2262577 -83175903 + AT_rich Low_complexity Low_complexity 1 23 0 1091 200 30 34 chr17 2262632 2262703 -83175777 - L1MB7 LINE L1 -1 6183 6113 2396 87 3 3 chr17 2262703 2263015 -83175465 - AluSq SINE Alu -1 312 1 1091 200 30 34 chr17 2263015 2263208 -83175272 - L1MB7 LINE L1 -71 6113 5920 262 114 0 0 chr17 2264311 2264346 -83174134 + U2 snRNA snRNA 1 35 -153 4224 99 11 0 chr17 2264391 2264945 -83173535 - L1PA11 LINE L1 0 6174 5615 441 127 0 0 chr17 2264947 2265018 -83173462 + L1P LINE L1 5017 5087 -1059 1198 28 0 14 chr17 2265019 2265161 -83173319 + MER11A LTR ERVK 1 140 -1126 9443 23 0 0 chr17 2265169 2266976 -83171504 - L1PA2 LINE L1 -2 6153 4346 8406 31 0 0 chr17 2266976 2267950 -83170530 + L1PA2 LINE L1 3387 4360 -1786 316 329 40 72 chr17 2268001 2268223 -83170257 - L1MB7 LINE L1 -2161 5647 5433 1544 180 34 3 chr17 2268228 2268523 -83169957 - L1MA9 LINE L1 0 6312 6009 1593 179 42 72 chr17 2268530 2268988 -83169492 - L1MCa LINE L1 -4896 1530 1087 1974 175 29 14 chr17 2268988 2269336 -83169144 - MLT1A1 LTR MaLR 0 365 13 3199 197 42 66 chr17 2269337 2270137 -83168343 - L1MCa LINE L1 -4849 1058 577 2104 132 0 3 chr17 2270137 2270433 -83168047 + AluSq SINE Alu 1 295 -18 3199 197 42 66 chr17 2270433 2270996 -83167484 - L1MCa LINE L1 -5330 577 2 248 171 0 0 chr17 2271211 2271252 -83167228 + MER105 DNA DNA 2 42 -162 * 556 248 74 0 chr17 2271251 2271400 -83167080 - MER105 DNA DNA -42 162 3 756 155 65 6 chr17 2271911 2272079 -83166401 - Charlie5 DNA MER1_type -27 2585 2408 491 135 34 149 chr17 2272117 2272192 -83166288 - Charlie5 DNA MER1_type -160 2464 2413 2230 114 3 0 chr17 2272192 2272498 -83165982 - AluSc SINE Alu -2 307 1 491 135 34 149 chr17 2272498 2272570 -83165910 - Charlie5 DNA MER1_type -211 2413 2334 * 1225 262 111 25 chr17 2272561 2273004 -83165476 - MLT1E LTR MaLR -112 481 1 397 121 0 15 chr17 2273038 2273104 -83165376 + MSTA LTR MaLR 1 65 -363 1180 134 153 203 chr17 2273500 2274008 -83164472 - LTR12 LTR ERV1 -231 483 1 897 59 0 0 chr17 2274011 2274113 -83164367 + AluSq/x SINE Alu 35 136 -177 2156 102 3 7 chr17 2274114 2274417 -83164063 + AluY SINE Alu 1 302 -9 857 164 53 0 chr17 2274418 2274570 -83163910 - LTR45B LTR ERV1 -327 162 3 272 290 0 81 chr17 2276218 2276342 -83162138 + MIR SINE MIR 34 147 -115 1798 89 20 16 chr17 2276823 2277143 -83161337 - AluSq SINE Alu 0 359 39 1072 251 39 7 chr17 2277205 2277669 -83160811 + LTR33 LTR ERVL 1 518 -3 1027 221 40 0 chr17 2277829 2278055 -83160425 + MLT1A1 LTR MaLR 130 364 -1 180 395 18 30 chr17 2278056 2278223 -83160257 + L2 LINE L2 2475 2639 -675 796 202 40 0 chr17 2278283 2278456 -83160024 - L1MA4 LINE L1 -4 6296 6117 704 325 41 14 chr17 2278511 2278856 -83159624 + L2 LINE L2 2077 2430 -884 856 231 78 0 chr17 2278877 2279133 -83159347 + MLT1A1 LTR MaLR 2 277 -88 1984 114 7 37 chr17 2280733 2281031 -83157449 - AluSq SINE Alu -24 289 1 2275 169 19 2 chr17 2281031 2281450 -83157030 - L1MA5 LINE L1 -258 6042 5617 348 273 69 18 chr17 2281459 2281792 -83156688 - L1 LINE L1 -1593 4553 4204 201 143 0 0 chr17 2282435 2282470 -83156010 + (GGGAGA)n Simple_repeat Simple_repeat 4 38 0 189 74 0 0 chr17 2282542 2282569 -83155911 + (AATAG)n Simple_repeat Simple_repeat 4 30 0 3327 152 34 7 chr17 2282573 2283159 -83155321 + MER7C DNA MER2_type 1 602 0 217 316 0 13 chr17 2283913 2283989 -83154491 + CT-rich Low_complexity Low_complexity 2 76 0 301 256 44 0 chr17 2284574 2284664 -83153816 - MIR SINE MIR -37 225 132 22 88 0 0 chr17 2284706 2284763 -83153717 + AT_rich Low_complexity Low_complexity 1 57 0 848 121 86 17 chr17 2285119 2285293 -83153187 + MER53 DNA DNA 3 188 -1 1980 162 0 19 chr17 2285556 2285871 -83152609 - AluJo SINE Alu -1 311 3 300 291 38 13 chr17 2286093 2286172 -83152308 + MIR3 SINE MIR 98 178 -30 22 56 0 0 chr17 2286402 2286438 -83152042 + AT_rich Low_complexity Low_complexity 1 36 0 2154 113 0 7 chr17 2286672 2286963 -83151517 + AluSx SINE Alu 1 289 -23 11481 133 91 5 chr17 2286975 2287499 -83150981 - L1MA9 LINE L1 -34 6278 5800 2065 100 16 53 chr17 2287499 2287819 -83150661 - AluSq SINE Alu -5 308 1 11481 133 91 5 chr17 2287819 2290256 -83148224 - L1MA9 LINE L1 -512 5800 3065 8994 20 7 0 chr17 2290256 2292080 -83146400 + L1PA3 LINE L1 4325 6155 0 5420 219 51 73 chr17 2292103 2292524 -83145956 - L1M4 LINE L1 -1598 4784 4355 1215 190 31 0 chr17 2292524 2292750 -83145730 - MER46A DNA MER2_type -3 233 1 5420 219 51 73 chr17 2292750 2293769 -83144711 - L1M4 LINE L1 -2027 4355 3314 2382 80 3 0 chr17 2293769 2294068 -83144412 - AluSc SINE Alu -9 300 1 5420 219 51 73 chr17 2294068 2294402 -83144078 - L1M4 LINE L1 -3068 3314 2974 2374 97 0 10 chr17 2294402 2294712 -83143768 - AluSc SINE Alu -1 308 2 5420 219 51 73 chr17 2294712 2295363 -83143117 - L1M4 LINE L1 -3408 2974 2420 1524 134 4 0 chr17 2295370 2295609 -83142871 + Tigger1 DNA MER2_type 2 241 -2177 433 162 27 18 chr17 2295626 2295737 -83142743 + MER69 DNA AcHobo 2101 2212 -314 518 200 20 0 chr17 2295737 2295837 -83142643 + AluJo SINE Alu 121 222 -90 695 187 251 12 chr17 2295853 2296104 -83142376 + MER69 DNA AcHobo 2216 2526 0 1958 157 3 3 chr17 2296227 2296527 -83141953 + AluJb SINE Alu 1 300 -12 350 262 108 8 chr17 2296937 2297089 -83141391 + MIR SINE MIR 25 180 -58 901 188 41 64 chr17 2297907 2298125 -83140355 - MER58A DNA MER1_type 0 224 12 188 384 89 7 chr17 2298154 2298300 -83140180 + L2 LINE L2 2804 2961 -352 314 289 136 34 chr17 2298402 2298740 -83139740 + LTR33 LTR ERVL 22 393 -130 483 303 102 39 chr17 2299154 2299408 -83139072 + L2 LINE L2 3044 3313 0 186 43 0 0 chr17 2299524 2299547 -83138933 + (TGAA)n Simple_repeat Simple_repeat 3 25 0 268 226 19 0 chr17 2300056 2300109 -83138371 + MLT1D LTR MaLR 1 54 -451 * 1163 154 72 16 chr17 2300104 2300532 -83137948 + MLT1D LTR MaLR 10 505 0 192 158 0 0 chr17 2300558 2300596 -83137884 + (TA)n Simple_repeat Simple_repeat 1 38 0 809 200 12 0 chr17 2300747 2300912 -83137568 - MLT1E2 LTR MaLR 0 626 460 337 215 126 22 chr17 2301682 2301817 -83136663 - MLT1K LTR MaLR -66 522 374 193 391 11 11 chr17 2302249 2302341 -83136139 - MIR SINE MIR -80 182 91 974 182 34 62 chr17 2302341 2302632 -83135848 + L1MA9 LINE L1 5992 6274 -38 262 284 11 34 chr17 2302654 2302742 -83135738 - MIR3 SINE MIR -109 99 14 181 206 0 0 chr17 2303356 2303390 -83135090 - MIR SINE MIR -16 246 213 * 471 351 40 68 chr17 2303360 2303787 -83134693 - L2 LINE L2 -26 3246 2832 465 322 83 10 chr17 2303952 2304157 -83134323 + MIR SINE MIR 30 249 -13 198 200 0 0 chr17 2304123 2304163 -83134317 + L2 LINE L2 3261 3300 -13 * 2661 241 68 22 chr17 2304222 2305265 -83133215 - L1ME3A LINE L1 -5 6165 5088 383 321 18 14 chr17 2306412 2306633 -83131847 + L1M4 LINE L1 3921 4142 -2004 327 280 11 21 chr17 2306635 2306728 -83131752 - L2 LINE L2 -1 3312 3221 585 305 10 5 chr17 2306739 2306936 -83131544 + ERVL LTR ERVL 4709 4906 -858 627 301 10 5 chr17 2307479 2307685 -83130795 + ERVL LTR ERVL 4941 5147 -617 211 365 22 62 chr17 2308176 2308450 -83130030 + L2 LINE L2 2694 2956 -358 310 263 153 25 chr17 2309030 2309148 -83129332 - MER5B DNA MER1_type 0 178 46 507 212 131 77 chr17 2309171 2309368 -83129112 + MER5A DNA MER1_type 14 189 0 2304 103 0 0 chr17 2310112 2310414 -83128066 + AluSp SINE Alu 1 302 -11 1214 331 97 50 chr17 2310449 2310734 -83127746 - L2 LINE L2 -11 3261 2991 2474 74 7 3 chr17 2310734 2311044 -83127436 + AluY SINE Alu 1 311 0 1214 331 97 50 chr17 2311044 2311336 -83127144 - L2 LINE L2 -281 2991 2714 2576 58 0 0 chr17 2311336 2311645 -83126835 + AluY SINE Alu 1 309 -2 1214 331 97 50 chr17 2311645 2312358 -83126122 - L2 LINE L2 -558 2714 1907 30 27 0 0 chr17 2313744 2313781 -83124699 + AT_rich Low_complexity Low_complexity 1 37 0 4552 35 2 0 chr17 2314008 2314547 -83123933 - L1PA3 LINE L1 -3 6152 5613 244 114 0 0 chr17 2314846 2314881 -83123599 + U2 snRNA snRNA 1 35 -153 3934 99 11 0 chr17 2314926 2315480 -83123000 - L1PA11 LINE L1 0 6174 5615 410 127 0 0 chr17 2315482 2315553 -83122927 + L1P LINE L1 5017 5087 -1059 1118 28 0 14 chr17 2315554 2315696 -83122784 + MER11A LTR ERVK 1 140 -1126 13178 24 0 0 chr17 2315704 2318022 -83120458 - L1PA2 LINE L1 -2 6153 3838 29048 43 38 3 chr17 2318023 2321875 -83116605 - L1P LINE L1 -2157 3989 2 3944 130 29 33 chr17 2321875 2322844 -83115636 + MER11A LTR ERVK 119 1266 0 2596 82 3 2 chr17 2322844 2323379 -83115101 + L1P4 LINE L1 5083 5617 -551 242 161 107 0 chr17 2323373 2323429 -83115051 - L1MB4 LINE L1 -36 6144 6083 * 1277 141 20 20 chr17 2323432 2323681 -83114799 - L1MA4 LINE L1 -280 6020 5772 355 305 0 8 chr17 2323800 2323928 -83114552 - L1M4 LINE L1 -1533 4613 4487 337 345 98 0 chr17 2324169 2324363 -83114117 - L1MB4 LINE L1 -2341 5467 5255 22 35 0 0 chr17 2324659 2324688 -83113792 + AT_rich Low_complexity Low_complexity 1 29 0 327 254 88 44 chr17 2324801 2324915 -83113565 - MIR SINE MIR -35 227 109 690 129 23 0 chr17 2326284 2326416 -83112064 - L1MB3 LINE L1 -2 6181 6047 24574 77 10 5 chr17 2326431 2332539 -83105941 - L1PA5 LINE L1 -8 6146 12 334 235 81 78 chr17 2333276 2333302 -83105178 + MLT1K LTR MaLR 32 56 -532 2083 196 112 39 chr17 2333302 2333813 -83104667 + LTR55 LTR ERV 1 548 0 334 235 81 78 chr17 2333813 2334022 -83104458 + MLT1K LTR MaLR 56 298 -290 370 244 0 0 chr17 2334081 2334163 -83104317 - MLT1K LTR MaLR -138 450 369 955 261 127 54 chr17 2334332 2335094 -83103386 + HAL1 LINE L1 637 1454 -1053 243 284 26 32 chr17 2335149 2335272 -83103208 + L1ME LINE L1 3 126 -5944 714 99 18 9 chr17 2335291 2335402 -83103078 - L1MA7 LINE L1 -409 5882 5771 642 137 10 0 chr17 2335402 2335504 -83102976 - L1MA2 LINE L1 0 6304 6202 230 265 0 44 chr17 2335506 2335574 -83102906 + MLT1K LTR MaLR 217 281 -307 4334 116 22 22 chr17 2335651 2336340 -83102140 - L1MA2 LINE L1 -107 6197 5509 434 37 0 0 chr17 2336342 2336396 -83102084 - L1MA2 LINE L1 -895 5407 5354 8101 32 0 0 chr17 2336396 2337539 -83100941 - L1PA3 LINE L1 0 6155 5013 30731 35 1 0 chr17 2337539 2341196 -83097284 + L1PA3 LINE L1 1344 5001 -1145 8039 195 31 83 chr17 2341198 2342826 -83095654 - L1 LINE L1 -783 6782 5072 1843 106 44 7 chr17 2342826 2343099 -83095381 - L1MA1 LINE L1 0 6302 6020 8039 195 31 83 chr17 2343099 2343463 -83095017 - L1 LINE L1 -2493 5072 4691 489 211 11 0 chr17 2343463 2343553 -83094927 - AluJb SINE Alu -11 301 211 8039 195 31 83 chr17 2343553 2344580 -83093900 - L1 LINE L1 -2874 4691 3970 261 0 0 0 chr17 2344580 2344609 -83093871 + (TC)n Simple_repeat Simple_repeat 2 30 0 8039 195 31 83 chr17 2344609 2345639 -83092841 - L1 LINE L1 -3595 3970 2889 316 167 11 67 chr17 2345654 2345744 -83092736 + L1M4 LINE L1 3398 3482 -2664 258 274 49 55 chr17 2346548 2346712 -83091768 + L1MC1 LINE L1 5837 5999 -334 * 1495 149 15 8 chr17 2346594 2346856 -83091624 + L1MB3 LINE L1 5881 6144 -39 811 152 0 30 chr17 2346861 2346993 -83091487 - AluJo SINE Alu -176 136 9 322 302 0 0 chr17 2347286 2347392 -83091088 + L1M4 LINE L1 3465 3570 -2576 6734 206 9 7 chr17 2347397 2348841 -83089639 - L1P LINE L1 -2972 3174 1728 * 20845 40 1 1 chr17 2348836 2351848 -83086632 - L1PA5 LINE L1 -271 5883 2870 6280 142 21 16 chr17 2351824 2352831 -83085649 - MSTA-int LTR MaLR -566 1014 3 * 1961 143 178 22 chr17 2352833 2353203 -83085277 - MSTA LTR MaLR 0 428 1 1813 153 54 15 chr17 2353365 2353699 -83084781 - L1MA7 LINE L1 0 6291 5945 1950 134 62 3 chr17 2353699 2354006 -83084474 + L1M2 LINE L1 5434 5758 -533 429 287 71 71 chr17 2354617 2354899 -83083581 - MLT1I LTR MaLR 0 409 128 254 216 67 97 chr17 2354957 2355091 -83083389 - LTR67 LTR ERVL -17 540 411 312 333 8 17 chr17 2356027 2356147 -83082333 - MLT1L LTR MaLR -355 260 142 192 233 0 0 chr17 2356304 2356347 -83082133 + MIR SINE MIR 61 103 -159 10899 198 44 79 chr17 2356363 2356736 -83081744 - L1PB2 LINE L1 -2 6865 6481 225 232 0 0 chr17 2356736 2356792 -83081688 + LTR66 LTR ERVL 398 453 -157 10899 198 44 79 chr17 2356792 2358959 -83079521 - L1PB2 LINE L1 -386 6481 4241 1981 141 7 3 chr17 2358959 2359258 -83079222 - AluJb SINE Alu -12 300 1 10899 198 44 79 chr17 2359258 2359790 -83078690 - L1PB2 LINE L1 -2626 4241 3692 6207 60 21 57 chr17 2359790 2361974 -83076506 - SVA Other Other -518 1379 54 875 34 26 0 chr17 2361974 2362091 -83076389 + (GGGAGA)n Simple_repeat Simple_repeat 4 123 0 10899 198 44 79 chr17 2362091 2363895 -83074585 - L1PB2 LINE L1 -3174 3693 1828 2268 96 0 0 chr17 2363895 2364188 -83074292 - L1PB1 LINE L1 -1 6150 5858 10899 198 44 79 chr17 2364188 2364342 -83074138 - L1PB2 LINE L1 -5039 1828 1670 320 77 39 0 chr17 2364342 2364394 -83074086 - Alu SINE Alu 0 302 249 10899 198 44 79 chr17 2364394 2364486 -83073994 - L1PB2 LINE L1 -5197 1670 1576 2070 139 10 0 chr17 2364486 2364789 -83073691 - AluSx SINE Alu -6 306 1 10899 198 44 79 chr17 2364789 2366445 -83072035 - L1PB2 LINE L1 -5291 1576 1 409 275 107 0 chr17 2366457 2366588 -83071892 + MIR SINE MIR 117 261 -1 980 244 14 3 chr17 2366902 2367155 -83071325 + L1ME LINE L1 5419 5669 -493 2410 187 120 21 chr17 2367224 2367877 -83070603 - MER52A LTR ERV1 -955 800 4 313 294 24 0 chr17 2368124 2368209 -83070271 - MIR3 SINE MIR -45 163 77 21 0 0 0 chr17 2370502 2370523 -83067957 + AT_rich Low_complexity Low_complexity 1 21 0 200 261 58 0 chr17 2370803 2370872 -83067608 - MIR SINE MIR -93 169 97 297 303 42 34 chr17 2370914 2371033 -83067447 + L2 LINE L2 2953 3072 -200 246 312 21 64 chr17 2371866 2372007 -83066473 + L2 LINE L2 2933 3067 -205 656 292 88 22 chr17 2372224 2372498 -83065982 + L3 LINE CR1 1137 1428 -149 414 258 207 23 chr17 2372542 2372760 -83065720 - MIR SINE MIR -6 256 3 34 84 0 0 chr17 2373094 2373177 -83065303 + AT_rich Low_complexity Low_complexity 1 83 0 967 193 63 19 chr17 2373830 2374037 -83064443 + MER58A DNA MER1_type 1 216 -8 2359 59 3 11 chr17 2374038 2374348 -83064132 + AluSp SINE Alu 1 308 0 244 118 55 47 chr17 2374498 2374625 -83063855 + (TAGA)n Simple_repeat Simple_repeat 1 128 0 606 206 168 29 chr17 2374631 2374840 -83063640 - MIR SINE MIR -18 244 7 21 0 0 0 chr17 2375747 2375768 -83062712 + GC_rich Low_complexity Low_complexity 1 21 0 1992 118 3 20 chr17 2376362 2376667 -83061813 - AluSx SINE Alu -12 300 1 2253 106 0 10 chr17 2377243 2377546 -83060934 + AluSx SINE Alu 1 300 -12 2594 241 92 13 chr17 2377758 2378549 -83059931 + L1ME2 LINE L1 5311 6164 0 263 212 42 76 chr17 2379237 2379355 -83059125 + L1MC4 LINE L1 7791 7904 -138 29 70 0 0 chr17 2379610 2379667 -83058813 + AT_rich Low_complexity Low_complexity 1 57 0 373 267 81 59 chr17 2380017 2380253 -83058227 + HAL1b LINE L1 476 716 -632 288 169 113 0 chr17 2380503 2380574 -83057906 + L1ME2 LINE L1 4783 4861 -1285 * 3658 164 19 15 chr17 2380554 2381226 -83057254 - L1P LINE L1 -1148 4998 4324 587 96 28 4 chr17 2381215 2381346 -83057134 + L1PA13 LINE L1 5943 6072 -93 * 435 225 78 35 chr17 2381353 2381495 -83056985 + L1ME2 LINE L1 5701 5848 -316 980 42 42 0 chr17 2381495 2381614 -83056866 + L1PA13 LINE L1 6037 6160 -3 1128 227 50 35 chr17 2381614 2382051 -83056429 + L1ME2 LINE L1 4829 6076 -88 2022 145 0 0 chr17 2382163 2382499 -83055981 - AluSx SINE Alu 0 336 1 342 273 53 17 chr17 2382549 2382717 -83055763 - L1M4 LINE L1 -779 5367 5197 27 0 0 0 chr17 2382787 2382814 -83055666 + AT_rich Low_complexity Low_complexity 1 27 0 26 0 0 0 chr17 2382982 2383008 -83055472 + AT_rich Low_complexity Low_complexity 1 26 0 282 274 88 49 chr17 2383127 2383433 -83055047 - L1M4 LINE L1 -1252 4894 4577 378 346 34 19 chr17 2383889 2384158 -83054322 - L2 LINE L2 -868 2446 2174 1811 99 3 127 chr17 2384183 2384546 -83053934 + AluSx SINE Alu 5 326 0 1100 70 7 0 chr17 2384601 2384755 -83053725 - L1P4 LINE L1 -489 5672 5512 2430 81 3 0 chr17 2384995 2385303 -83053177 - AluY SINE Alu -2 309 1 1887 112 12 0 chr17 2385651 2385929 -83052551 + AluSg SINE Alu 28 310 0 1918 168 0 3 chr17 2385939 2386249 -83052231 + AluJo SINE Alu 1 309 -3 22 0 0 0 chr17 2386249 2386271 -83052209 + AT_rich Low_complexity Low_complexity 1 22 0 736 339 85 60 chr17 2387758 2388019 -83050461 + L2 LINE L2 1950 2203 -1069 2122 136 10 7 chr17 2388019 2388511 -83049969 + AluSx SINE Alu 1 312 0 736 339 85 60 chr17 2388511 2389535 -83048945 + L2 LINE L2 2203 3261 -11 3574 55 23 5 chr17 2389943 2390383 -83048097 - L1PA8 LINE L1 0 6172 5725 1705 172 23 10 chr17 2390383 2390691 -83047789 + MLT2D LTR ERVL 55 366 -48 951 60 51 31 chr17 2390709 2391031 -83047449 + (TAGA)n Simple_repeat Simple_repeat 1 328 0 1894 242 53 84 chr17 2392953 2393108 -83045372 - L1M4 LINE L1 -1131 5015 4857 728 53 21 21 chr17 2393108 2393242 -83045238 + L1PA2 LINE L1 6050 6183 0 1894 242 53 84 chr17 2393242 2393604 -83044876 - L1M4 LINE L1 -1289 4857 4485 6859 73 63 0 chr17 2393604 2395015 -83043465 - L1PA10 LINE L1 0 6168 4724 1894 242 53 84 chr17 2395015 2395443 -83043037 - L1M4 LINE L1 -1661 4485 4098 * 11904 172 7 18 chr17 2395439 2397498 -83040982 - L1P LINE L1 -1154 4992 2957 2046 115 11 3 chr17 2397498 2397784 -83040696 - AluSx SINE Alu -22 290 3 11904 172 7 18 chr17 2397784 2397942 -83040538 - L1P LINE L1 -3189 2957 2799 969 134 15 0 chr17 2398439 2398573 -83039907 + AluJo SINE Alu 1 136 -176 300 179 0 0 chr17 2398577 2398633 -83039847 - L1P LINE L1 -2085 4061 4006 778 156 170 7 chr17 2398652 2398787 -83039693 + AluJo SINE Alu 134 290 -22 246 62 0 0 chr17 2399042 2399074 -83039406 + (TG)n Simple_repeat Simple_repeat 1 32 0 2303 86 3 0 chr17 2399298 2399589 -83038891 - AluSp SINE Alu -21 292 1 349 270 79 53 chr17 2399977 2400129 -83038351 - MIR SINE MIR -43 219 64 1957 83 0 30 chr17 2400617 2400883 -83037597 + AluY SINE Alu 49 306 -5 251 273 13 0 chr17 2402371 2402448 -83036032 + GA-rich Low_complexity Low_complexity 1 78 0 2322 86 3 29 chr17 2402718 2403032 -83035448 + AluSg SINE Alu 5 310 0 191 269 30 30 chr17 2403043 2403110 -83035370 - L3 LINE CR1 -28 1549 1483 2249 82 0 7 chr17 2403261 2403552 -83034928 - AluY SINE Alu -22 289 1 260 192 39 0 chr17 2403557 2403609 -83034871 + MER5B DNA MER1_type 125 178 0 24 53 0 0 chr17 2404064 2404102 -83034378 + AT_rich Low_complexity Low_complexity 1 38 0 2452 88 0 0 chr17 2404460 2404768 -83033712 + AluSq SINE Alu 1 308 -5 546 253 67 108 chr17 2404774 2404980 -83033500 - L1M4 LINE L1 -1945 4201 3988 378 0 0 0 chr17 2404980 2405022 -83033458 + (TTA)n Simple_repeat Simple_repeat 2 43 0 1775 144 0 11 chr17 2405027 2405290 -83033190 - AluSx SINE Alu -52 260 1 546 253 67 108 chr17 2405290 2405568 -83032912 - L1M4 LINE L1 -2162 3984 3731 2033 119 43 12 chr17 2405874 2406202 -83032278 - L1MA4 LINE L1 -6 6294 5957 797 318 41 11 chr17 2406699 2407139 -83031341 - HAL1b LINE L1 -689 659 207 634 147 9 0 chr17 2408571 2408680 -83029800 - L1MA9 LINE L1 -349 5963 5854 764 145 69 19 chr17 2408683 2408842 -83029638 + L1MA7 LINE L1 6124 6290 -1 2138 63 21 102 chr17 2408908 2409243 -83029237 - AluYb8 SINE Alu -8 310 3 772 223 36 72 chr17 2409293 2409544 -83028936 - L1MA9 LINE L1 -5 6286 6045 568 250 96 14 chr17 2410868 2411076 -83027404 - L2 LINE L2 0 3313 3089 269 297 48 41 chr17 2412241 2412386 -83026094 + MIR3 SINE MIR 31 176 -32 2318 93 0 37 chr17 2412829 2413152 -83025328 + AluSq SINE Alu 1 311 -2 369 301 41 67 chr17 2413307 2413652 -83024828 - L1ME LINE L1 -303 5818 5483 33 66 0 0 chr17 2413702 2413763 -83024717 + AT_rich Low_complexity Low_complexity 1 61 0 320 304 112 0 chr17 2413771 2413896 -83024584 - MIR SINE MIR -12 250 112 362 52 86 35 chr17 2413998 2414056 -83024424 - L1PA15 LINE L1 -3 6162 6102 4979 100 4 1 chr17 2414099 2414778 -83023702 - L1PA13 LINE L1 -49 6114 5434 12220 90 9 0 chr17 2414781 2416353 -83022127 - HERVL LTR ERVL -3328 2326 740 5767 87 10 33 chr17 2416358 2416843 -83021637 + L1PA10 LINE L1 5361 5821 -347 2086 101 11 0 chr17 2416843 2417121 -83021359 - AluSx SINE Alu -22 290 10 5767 87 10 33 chr17 2417121 2417459 -83021021 + L1PA10 LINE L1 5821 6165 -3 * 11353 163 41 18 chr17 2417441 2420727 -83017753 + L1MA5 LINE L1 2929 6290 -10 5477 30 0 0 chr17 2420954 2421551 -83016929 + L1PA3 LINE L1 5556 6152 -3 30 27 0 0 chr17 2421778 2421815 -83016665 + AT_rich Low_complexity Low_complexity 1 37 0 1148 330 96 53 chr17 2423202 2423915 -83014565 + L2 LINE L2 1907 2587 -685 2594 58 0 0 chr17 2423915 2424224 -83014256 - AluY SINE Alu -2 309 1 1148 330 96 53 chr17 2424224 2424520 -83013960 + L2 LINE L2 2587 2869 -403 2480 74 7 3 chr17 2424520 2424830 -83013650 - AluY SINE Alu 0 311 1 1148 330 96 53 chr17 2424830 2425115 -83013365 + L2 LINE L2 2869 3261 -11 2288 99 0 3 chr17 2425150 2425453 -83013027 - AluSp SINE Alu -11 302 1 506 200 156 56 chr17 2426234 2426394 -83012086 - MER5A DNA MER1_type 0 189 14 301 263 153 25 chr17 2426417 2426535 -83011945 + MER5B DNA MER1_type 46 178 0 240 364 27 53 chr17 2427164 2427389 -83011091 - L2 LINE L2 -402 2912 2694 699 301 10 5 chr17 2427880 2428086 -83010394 - ERVL LTR ERVL -617 5147 4941 227 390 70 0 chr17 2429113 2429213 -83009267 + L2 LINE L2 3141 3247 -25 23 68 0 0 chr17 2429715 2429759 -83008721 + AT_rich Low_complexity Low_complexity 1 44 0 5927 139 30 0 chr17 2430038 2431051 -83007429 - L1PA16 LINE L1 -3 6163 5131 192 226 274 0 chr17 2432002 2432064 -83006416 - MIR SINE MIR -107 155 77 511 262 16 40 chr17 2432826 2433024 -83005456 + MIR SINE MIR 10 200 -54 318 258 262 40 chr17 2434022 2434297 -83004183 - L1MC/D LINE L1 -496 5625 5408 369 221 26 0 chr17 2434586 2434663 -83003817 - MER58 DNA MER1_type -1 2419 2341 33 0 0 0 chr17 2434672 2434705 -83003775 + AT_rich Low_complexity Low_complexity 1 33 0 39276 38 5 1 chr17 2434708 2440188 -82998292 - L1PA4 LINE L1 0 6155 656 373 286 117 35 chr17 2440223 2440506 -82997974 - L1MC/D LINE L1 -896 5250 4945 2338 102 0 3 chr17 2440539 2440842 -82997638 - AluSx SINE Alu -10 302 1 262 114 0 0 chr17 2441029 2441064 -82997416 + U2 snRNA snRNA 1 35 -153 4224 99 11 0 chr17 2441109 2441663 -82996817 - L1PA11 LINE L1 0 6174 5615 441 127 0 0 chr17 2441665 2441736 -82996744 + L1P4 LINE L1 5017 5087 -1059 1198 28 0 14 chr17 2441737 2441879 -82996601 + MER11A LTR ERVK 1 140 -1126 13748 31 1 0 chr17 2441887 2444201 -82994279 - L1PA2 LINE L1 -2 6153 3838 31112 43 38 3 chr17 2444202 2448055 -82990425 - L1P LINE L1 -2157 3989 2 4256 127 30 33 chr17 2448055 2449024 -82989456 + MER11A LTR ERVK 119 1266 0 2796 85 3 2 chr17 2449024 2449561 -82988919 + L1P4 LINE L1 5083 5619 -549 266 161 107 0 chr17 2449553 2449609 -82988871 - L1MB4 LINE L1 -36 6144 6083 * 1393 144 21 20 chr17 2449581 2449861 -82988619 - L1MA4 LINE L1 -243 6054 5772 409 290 38 8 chr17 2449980 2450111 -82988369 - L1M4 LINE L1 -1533 4613 4479 331 345 98 0 chr17 2450349 2450543 -82987937 - L1MB4 LINE L1 -2341 5467 5255 22 35 0 0 chr17 2450839 2450868 -82987612 + AT_rich Low_complexity Low_complexity 1 29 0 312 244 35 35 chr17 2450992 2451078 -82987402 - MIR SINE MIR -53 209 124 192 226 274 0 chr17 2452821 2452883 -82985597 + MIR SINE MIR 77 155 -107 5927 139 17 3 chr17 2453833 2454846 -82983634 + L1PA16 LINE L1 5131 6163 -3 23 68 0 0 chr17 2455125 2455169 -82983311 + AT_rich Low_complexity Low_complexity 1 44 0 227 390 70 0 chr17 2455671 2455771 -82982709 - L2 LINE L2 -25 3247 3141 2087 126 3 0 chr17 2456611 2456905 -82981575 + AluSx SINE Alu 1 295 -17 2254 95 0 0 chr17 2460330 2460640 -82977840 + AluSx SINE Alu 1 310 0 236 331 88 11 chr17 2460871 2461052 -82977428 + L2 LINE L2 2329 2523 -791 1562 182 36 0 chr17 2463101 2463381 -82975099 + AluJo SINE Alu 1 290 -22 299 248 78 43 chr17 2463549 2463690 -82974790 - L2 LINE L2 0 3313 3168 1475 224 71 6 chr17 2464407 2464759 -82973721 - L1ME2 LINE L1 -21 6143 5769 893 247 151 49 chr17 2464908 2465439 -82973041 + L1MEc LINE L1 31 615 -5781 204 120 40 20 chr17 2465523 2465573 -82972907 + (TA)n Simple_repeat Simple_repeat 2 52 0 248 70 23 0 chr17 2465590 2465633 -82972847 + (TA)n Simple_repeat Simple_repeat 2 45 0 1070 106 0 0 chr17 2465636 2465777 -82972703 - AluSg/x SINE Alu -18 294 154 2229 118 0 16 chr17 2465785 2466091 -82972389 - AluSc SINE Alu -8 301 1 494 332 80 27 chr17 2466093 2466620 -82971860 - L1MB4 LINE L1 -859 5287 4733 336 278 128 0 chr17 2466876 2467009 -82971471 - L1ME2 LINE L1 -502 5660 5511 * 5004 36 24 36 chr17 2467005 2467663 -82970817 - L1PA5 LINE L1 -1188 4958 4309 7933 40 0 2 chr17 2467663 2468861 -82969619 + L1PA5 LINE L1 4957 6154 0 2271 107 0 0 chr17 2468975 2469273 -82969207 - AluSx SINE Alu -14 298 1 462 316 7 0 chr17 2469460 2469596 -82968884 + MIR SINE MIR 51 187 -75 415 301 34 0 chr17 2469667 2469813 -82968667 - MIR SINE MIR -48 214 64 187 318 118 0 chr17 2470900 2470985 -82967495 - MIR SINE MIR -56 152 58 441 293 145 40 chr17 2473095 2473494 -82964986 - L1MB4 LINE L1 -3026 3120 2680 308 246 16 82 chr17 2474141 2474263 -82964217 - HAL1b LINE L1 -441 907 794 770 286 64 75 chr17 2474308 2475131 -82963349 - HAL1b LINE L1 -437 911 98 22 0 0 0 chr17 2475360 2475382 -82963098 + AT_rich Low_complexity Low_complexity 1 22 0 3472 83 7 2 chr17 2475419 2475864 -82962616 - L1PA10 LINE L1 0 6168 5722 184 79 79 0 chr17 2478377 2478415 -82960065 + A-rich Low_complexity Low_complexity 2 42 0 237 98 0 0 chr17 2480424 2480465 -82958015 + (CA)n Simple_repeat Simple_repeat 2 42 0 525 259 77 79 chr17 2480557 2480998 -82957482 - L1ME LINE L1 -303 5818 5379 855 127 19 83 chr17 2480999 2481156 -82957324 - Tigger3(Golem) DNA MER2_type 0 3038 2892 300 258 16 0 chr17 2481169 2481231 -82957249 - Tigger3(Golem) DNA MER2_type -2966 63 1 264 100 0 0 chr17 2481265 2481305 -82957175 + (T)n Simple_repeat Simple_repeat 1 40 0 28 0 0 0 chr17 2481660 2481688 -82956792 + AT_rich Low_complexity Low_complexity 1 28 0 1238 227 64 24 chr17 2481746 2482121 -82956359 + L1ME LINE L1 451 840 -5230 769 213 11 32 chr17 2482115 2482303 -82956177 + L1PB4 LINE L1 5938 6121 -35 * 421 192 0 7 chr17 2482294 2482397 -82956083 + L1PB4 LINE L1 5987 6086 -68 * 396 204 231 0 chr17 2482368 2482476 -82956004 - MLT1D LTR MaLR -372 133 1 * 7050 54 10 11 chr17 2482476 2483634 -82954846 + L1PA7 LINE L1 4993 6154 0 189 352 68 0 chr17 2483635 2483723 -82954757 + MIR SINE MIR 157 250 -12 1733 171 7 3 chr17 2483740 2484045 -82954435 - AluJb SINE Alu -6 306 1 363 267 69 30 chr17 2484107 2484238 -82954242 - MIR SINE MIR -66 196 61 2246 91 3 0 chr17 2486027 2486324 -82952156 + AluSp SINE Alu 1 298 -15 269 94 47 16 chr17 2486505 2486569 -82951911 + GA-rich Low_complexity Low_complexity 1 66 0 215 337 22 11 chr17 2486896 2486985 -82951495 - L3 LINE CR1 -5 1572 1483 1882 99 32 7 chr17 2487136 2487418 -82951062 - AluY SINE Alu -22 289 1 641 239 6 44 chr17 2487572 2487731 -82950749 + MER5B DNA MER1_type 6 158 -20 539 213 7 85 chr17 2487995 2488020 -82950460 - MER5B DNA MER1_type -39 139 114 2384 57 0 7 chr17 2488020 2488317 -82950163 + AluSc SINE Alu 2 296 -13 539 213 7 85 chr17 2488317 2488432 -82950048 - MER5B DNA MER1_type -64 114 10 2504 37 0 3 chr17 2488981 2489279 -82949201 + AluY SINE Alu 1 297 -14 1840 127 22 0 chr17 2489737 2490041 -82948439 - AluSx SINE Alu 0 310 1 723 232 41 5 chr17 2490198 2490392 -82948088 - L1MA9 LINE L1 -39 6273 6073 537 253 126 16 chr17 2491737 2491919 -82946561 - L2 LINE L2 0 3313 3112 195 25 75 25 chr17 2492151 2492191 -82946289 + T-rich Low_complexity Low_complexity 4 45 0 2303 59 3 20 chr17 2492323 2492629 -82945851 + AluY SINE Alu 1 301 -10 26 0 0 0 chr17 2492997 2493023 -82945457 + AT_rich Low_complexity Low_complexity 1 26 0 6595 64 9 32 chr17 2493248 2494899 -82943581 + SVA Other Other 200 1386 0 237 319 121 17 chr17 2494918 2495034 -82943446 - L3 LINE CR1 -48 1529 1402 1046 190 121 6 chr17 2495732 2496026 -82942454 - MLT1A1 LTR MaLR 0 374 4 357 362 28 11 chr17 2497077 2497254 -82941226 - MER5A DNA MER1_type -3 186 7 209 363 59 15 chr17 2497363 2497498 -82940982 - MIR3 SINE MIR -66 142 2 278 236 0 132 chr17 2497583 2497689 -82940791 + MIR SINE MIR 28 119 -143 752 272 112 4 chr17 2497705 2497937 -82940543 + MIR SINE MIR 6 262 0 291 309 147 29 chr17 2498156 2498292 -82940188 + MIR3 SINE MIR 17 168 -40 1825 70 4 0 chr17 2498973 2499214 -82939266 + AluSq SINE Alu 64 305 -8 2314 65 0 7 chr17 2499566 2499872 -82938608 + AluY SINE Alu 1 304 -7 2107 87 0 0 chr17 2499971 2500247 -82938233 + AluSx SINE Alu 1 276 -36 242 114 0 23 chr17 2500259 2500303 -82938177 + (GGGA)n Simple_repeat Simple_repeat 2 44 0 180 0 0 0 chr17 2500305 2500325 -82938155 + (GGAAA)n Simple_repeat Simple_repeat 1 20 0 280 255 268 33 chr17 2501540 2501693 -82936787 + MIR SINE MIR 74 262 0 195 264 0 38 chr17 2501703 2501756 -82936724 - MIR SINE MIR 0 262 212 227 298 21 53 chr17 2502050 2502144 -82936336 + L3 LINE CR1 1279 1369 -208 22 56 0 0 chr17 2502190 2502226 -82936254 + AT_rich Low_complexity Low_complexity 1 36 0 2133 86 11 0 chr17 2502589 2502893 -82935587 - AluSq SINE Alu 0 308 2 263 320 80 51 chr17 2503956 2504131 -82934349 + MIR SINE MIR 17 196 -66 2186 65 0 0 chr17 2506006 2506282 -82932198 + AluY SINE Alu 35 310 -1 2307 68 0 10 chr17 2506699 2506994 -82931486 + AluY SINE Alu 1 292 -19 432 340 114 40 chr17 2507537 2508011 -82930469 + L2 LINE L2 2350 2858 -456 208 303 69 41 chr17 2508060 2508205 -82930275 - L2 LINE L2 -852 2462 2314 491 255 64 43 chr17 2508205 2508393 -82930087 - MLT1J LTR MaLR -13 498 307 1640 178 0 26 chr17 2508911 2508991 -82929489 + AluJo SINE Alu 1 82 -230 4196 118 25 67 chr17 2508991 2509712 -82928768 - LTR8 LTR ERV1 0 691 1 1640 178 0 26 chr17 2509712 2509934 -82928546 + AluJo SINE Alu 82 295 -17 298 333 65 38 chr17 2511301 2511487 -82926993 + MIR SINE MIR 46 236 -26 24 0 0 0 chr17 2511567 2511591 -82926889 + AT_rich Low_complexity Low_complexity 1 24 0 1355 37 0 0 chr17 2511591 2511752 -82926728 - L1PA4 LINE L1 -3 6152 5992 1881 133 27 3 chr17 2512453 2512754 -82925726 - AluSx SINE Alu -4 308 1 301 268 89 8 chr17 2512887 2513010 -82925470 + L2 LINE L2 2927 3059 -213 422 282 110 6 chr17 2513041 2513204 -82925276 - L2 LINE L2 -7 3306 3127 554 217 59 12 chr17 2513368 2513613 -82924867 - MER5C DNA MER1_type -1 323 9 1741 149 35 0 chr17 2513816 2514105 -82924375 - AluJo SINE Alu -10 302 4 827 94 0 0 chr17 2514216 2514333 -82924147 + AluSp/q SINE Alu 188 304 -9 1573 236 52 11 chr17 2514481 2514733 -82923747 - LTR40b LTR ERVL 0 462 183 2379 70 0 3 chr17 2514733 2515032 -82923448 - AluSq SINE Alu -15 298 1 1573 236 52 11 chr17 2515032 2515223 -82923257 - LTR40b LTR ERVL -279 183 1 23 33 0 0 chr17 2515537 2515567 -82922913 + AT_rich Low_complexity Low_complexity 1 30 0 339 65 0 0 chr17 2515839 2515885 -82922595 + (TG)n Simple_repeat Simple_repeat 1 46 0 395 282 126 11 chr17 2516488 2516662 -82921818 - MLT1L LTR MaLR -413 202 9 2064 131 0 0 chr17 2517173 2517479 -82921001 + AluSx SINE Alu 1 306 -6 771 241 72 62 chr17 2518355 2518780 -82919700 + L1ME LINE L1 5344 5777 -385 342 195 133 9 chr17 2519055 2519168 -82919312 + L1MC2 LINE L1 6218 6344 0 551 366 51 6 chr17 2519773 2520087 -82918393 + L3 LINE CR1 520 847 -730 333 360 55 6 chr17 2520091 2520255 -82918225 + L3 LINE CR1 1012 1183 -394 2052 127 7 3 chr17 2520263 2520571 -82917909 + AluSx SINE Alu 1 309 -3 273 308 64 39 chr17 2520579 2520666 -82917814 + L3 LINE CR1 1276 1370 -207 1928 153 3 0 chr17 2520666 2520974 -82917506 - AluJo SINE Alu -2 310 2 273 308 64 39 chr17 2520974 2521042 -82917438 + L3 LINE CR1 1370 1435 -142 880 253 91 103 chr17 2521259 2521785 -82916695 + MLT1H LTR MaLR 30 549 0 2060 136 0 3 chr17 2522198 2522506 -82915974 - AluSx SINE Alu -5 307 1 378 333 165 7 chr17 2522513 2522798 -82915682 - L3 LINE CR1 -389 1188 859 249 168 182 0 chr17 2522819 2522884 -82915596 + MER5A DNA MER1_type 7 98 -91 2056 99 0 53 chr17 2523962 2524285 -82914195 + AluSx SINE Alu 1 306 -6 203 178 0 22 chr17 2524359 2524404 -82914076 + (CTGGGG)n Simple_repeat Simple_repeat 6 49 0 746 233 30 6 chr17 2524739 2524932 -82913548 - MER4C LTR ERV1 0 456 276 1879 121 22 35 chr17 2524951 2525264 -82913216 + AluSx SINE Alu 1 309 -3 530 160 19 122 chr17 2525306 2525413 -82913067 - MER4C LTR ERV1 -201 349 290 2132 110 0 0 chr17 2525413 2525713 -82912767 + AluSx SINE Alu 7 306 -6 530 160 19 122 chr17 2525713 2525839 -82912641 - MER4C LTR ERV1 -260 290 153 306 261 0 0 chr17 2525876 2525941 -82912539 - MIR SINE MIR -152 110 46 1769 151 35 0 chr17 2525943 2526227 -82912253 + AluSx SINE Alu 1 294 -18 1895 131 3 0 chr17 2526586 2526876 -82911604 + AluSx SINE Alu 1 291 -21 247 375 18 0 chr17 2527526 2527638 -82910842 - MIR SINE MIR -62 146 33 457 222 67 22 chr17 2528014 2528149 -82910331 + MIR3 SINE MIR 33 173 -35 514 140 39 39 chr17 2528316 2528495 -82909985 + CT-rich Low_complexity Low_complexity 1 179 0 223 167 0 24 chr17 2528495 2528537 -82909943 + C-rich Low_complexity Low_complexity 2 42 0 302 266 156 40 chr17 2528886 2529187 -82909293 - L2 LINE L2 -11 3261 2926 1951 108 3 0 chr17 2529322 2529610 -82908870 + AluSq SINE Alu 21 309 -4 189 94 0 0 chr17 2530108 2530140 -82908340 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 790 133 9 0 chr17 2530142 2530255 -82908225 - AluJo SINE Alu -33 279 166 795 141 0 8 chr17 2530399 2530520 -82907960 - AluJo SINE Alu -146 166 47 1944 96 55 17 chr17 2530617 2530908 -82907572 + AluSx SINE Alu 1 302 -10 2194 76 24 0 chr17 2530913 2531202 -82907278 + AluY SINE Alu 2 297 -14 478 291 59 97 chr17 2531221 2531587 -82906893 + L1MC4a LINE L1 5260 5149 -1013 2248 85 0 0 chr17 2531587 2531880 -82906600 - AluSx SINE Alu -19 293 1 478 291 59 97 chr17 2531880 2532203 -82906277 + L1MC4a LINE L1 5148 5482 -680 1776 137 7 10 chr17 2532367 2532649 -82905831 + AluJb SINE Alu 1 283 -29 207 61 0 30 chr17 2532649 2532682 -82905798 + (TAAAA)n Simple_repeat Simple_repeat 2 100 0 23 0 0 0 chr17 2532755 2532778 -82905702 + AT_rich Low_complexity Low_complexity 1 23 0 186 250 132 0 chr17 2532867 2532943 -82905537 - MIR SINE MIR -79 183 98 772 97 142 0 chr17 2532943 2533056 -82905424 + AluSc SINE Alu 154 282 -27 331 26 0 0 chr17 2533056 2533095 -82905385 + (TAAA)n Simple_repeat Simple_repeat 2 68 0 308 304 69 0 chr17 2533540 2533642 -82904838 - L2 LINE L2 0 3272 3164 2328 96 0 7 chr17 2534079 2534382 -82904098 + AluSx SINE Alu 1 301 -11 405 302 129 16 chr17 2534796 2534939 -82903541 + L2 LINE L2 3037 3162 -151 2337 86 10 16 chr17 2534939 2535252 -82903228 - AluSx SINE Alu -1 311 1 405 302 129 16 chr17 2535252 2535356 -82903124 + L2 LINE L2 3162 3312 -1 239 307 44 18 chr17 2536268 2536382 -82902098 + L2 LINE L2 2705 2821 -493 2294 114 3 0 chr17 2536994 2537301 -82901179 - AluSg SINE Alu -2 308 1 2205 118 0 7 chr17 2537526 2537832 -82900648 - AluJb SINE Alu -8 304 1 188 280 84 28 chr17 2537860 2537967 -82900513 + L3 LINE CR1 1453 1565 -12 2009 126 4 0 chr17 2538026 2538304 -82900176 - AluSx SINE Alu -33 279 1 1140 88 0 0 chr17 2538304 2538441 -82900039 - AluSq/x SINE Alu -175 137 1 2454 97 3 0 chr17 2538954 2539263 -82899217 - AluSq SINE Alu -3 310 1 2032 115 45 0 chr17 2539501 2539789 -82898691 - AluSx SINE Alu -11 301 1 428 233 60 17 chr17 2540619 2540735 -82897745 + MIR3 SINE MIR 82 202 -6 2441 103 0 0 chr17 2540789 2541100 -82897380 + AluSq SINE Alu 1 311 -2 25 31 0 0 chr17 2541120 2541152 -82897328 + AT_rich Low_complexity Low_complexity 1 32 0 260 235 224 20 chr17 2543064 2543162 -82895318 + L3 LINE CR1 1447 1564 -13 263 293 71 36 chr17 2543666 2543806 -82894674 - MIR3 SINE MIR -56 152 8 6902 55 6 8 chr17 2545014 2545981 -82892499 + L1PA8A LINE L1 5163 6127 -4 203 138 0 0 chr17 2546340 2546369 -82892111 + (TTG)n Simple_repeat Simple_repeat 2 30 0 1836 98 124 0 chr17 2546403 2546669 -82891811 - AluSq SINE Alu -14 299 1 201 276 17 17 chr17 2547581 2547639 -82890841 - L3 LINE CR1 -7 1570 1513 * 233 274 59 88 chr17 2547628 2547730 -82890750 - MER5B DNA MER1_type -4 174 76 2421 97 0 0 chr17 2547922 2548232 -82890248 - AluSg SINE Alu 0 310 1 754 269 187 35 chr17 2548540 2548946 -82889534 - L2 LINE L2 -1 3312 2845 209 309 117 97 chr17 2549020 2549088 -82889392 + MER5B DNA MER1_type 18 83 -106 390 214 79 84 chr17 2549088 2549150 -82889330 - MER5B DNA MER1_type -1 177 116 2283 84 10 3 chr17 2549150 2549446 -82889034 + AluY SINE Alu 1 298 -13 390 214 79 84 chr17 2549446 2549561 -82888919 - MER5B DNA MER1_type -62 116 1 209 309 117 97 chr17 2549561 2549658 -82888822 + MER5B DNA MER1_type 83 189 0 292 204 46 99 chr17 2549736 2549888 -82888592 + L1ME1 LINE L1 6005 6148 -18 364 260 55 87 chr17 2549902 2550029 -82888451 - MER5B DNA MER1_type -49 129 7 328 272 0 0 chr17 2550099 2550180 -82888300 - MER5A DNA MER1_type -80 109 29 * 364 235 202 8 chr17 2550176 2550295 -82888185 + MER5A DNA MER1_type 48 189 0 200 351 90 9 chr17 2550467 2550578 -82887902 + L2 LINE L2 3186 3305 -8 1942 147 7 10 chr17 2550713 2551013 -82887467 - AluJo SINE Alu -13 299 1 345 291 86 0 chr17 2551495 2551612 -82886868 + L2 LINE L2 3187 3313 0 13203 126 48 43 chr17 2551773 2552866 -82885614 + Tigger1 DNA MER2_type 11 1097 -1321 2490 69 0 7 chr17 2552866 2553169 -82885311 - AluY SINE Alu -10 301 1 13203 126 48 43 chr17 2553169 2554034 -82884446 + Tigger1 DNA MER2_type 1097 1987 -431 2175 121 0 7 chr17 2554034 2554340 -82884140 + AluSx SINE Alu 1 304 -8 13203 126 48 43 chr17 2554340 2554775 -82883705 + Tigger1 DNA MER2_type 1987 2418 0 267 31 0 0 chr17 2555568 2555600 -82882880 + (TGAA)n Simple_repeat Simple_repeat 2 33 0 590 231 8 45 chr17 2556157 2556291 -82882189 + MIR SINE MIR 121 249 -13 2359 108 0 3 chr17 2556910 2557224 -82881256 - AluSp SINE Alu 0 313 1 420 327 133 65 chr17 2557251 2557766 -82880714 + L2 LINE L2 2724 3270 -2 2391 106 0 0 chr17 2558112 2558423 -82880057 - AluSx SINE Alu -1 311 1 2051 125 0 3 chr17 2559044 2559333 -82879147 + AluSx SINE Alu 22 309 -3 258 105 0 0 chr17 2559354 2559392 -82879088 + (GGGA)n Simple_repeat Simple_repeat 4 41 0 190 265 20 0 chr17 2559654 2559703 -82878777 + MIR SINE MIR 168 217 -45 252 298 21 0 chr17 2560162 2560256 -82878224 + L1ME LINE L1 5558 5653 -468 6526 24 0 0 chr17 2560531 2561279 -82877201 + L1PA3 LINE L1 5408 6155 0 1097 24 0 0 chr17 2561467 2561593 -82876887 + L1PA5 LINE L1 6020 6145 -9 219 307 94 8 chr17 2561925 2562052 -82876428 + L2 LINE L2 2945 3082 -190 634 184 0 0 chr17 2562117 2562226 -82876254 - MER63 DNA MER1_type 0 1061 953 1585 127 19 0 chr17 2562232 2562491 -82875989 + L1MA9 LINE L1 6044 6307 -5 879 242 33 25 chr17 2562520 2562580 -82875900 - MER63 DNA MER1_type -96 966 908 2153 125 0 3 chr17 2562580 2562867 -82875613 + AluSx SINE Alu 1 288 -24 197 32 0 32 chr17 2562867 2562898 -82875582 + (TTAA)n Simple_repeat Simple_repeat 3 32 0 2153 125 0 3 chr17 2562898 2562913 -82875567 + AluSx SINE Alu 288 302 -10 879 242 33 25 chr17 2562913 2563096 -82875384 - MER63 DNA MER1_type -154 908 721 897 170 105 0 chr17 2563098 2563298 -82875182 + MER44D DNA MER2_type 1 491 -118 2151 93 11 0 chr17 2563354 2563632 -82874848 + AluSx SINE Alu 30 310 -2 298 127 28 42 chr17 2563634 2563705 -82874775 - MER63 DNA MER1_type -740 190 121 * 721 149 0 25 chr17 2563703 2563824 -82874656 + MER44D DNA MER2_type 488 605 0 * 2178 189 38 34 chr17 2563824 2564224 -82874256 - MER63C DNA MER1_type -472 588 191 2262 114 7 0 chr17 2564224 2564530 -82873950 + AluSx SINE Alu 1 308 -4 2178 189 38 34 chr17 2564530 2564680 -82873800 - MER63C DNA MER1_type -869 191 33 258 32 0 0 chr17 2564680 2564711 -82873769 + (CA)n Simple_repeat Simple_repeat 2 32 0 2178 189 38 34 chr17 2564711 2564745 -82873735 - MER63C DNA MER1_type -1027 33 1 228 279 0 44 chr17 2564873 2564941 -82873539 + MIR SINE MIR 79 143 -65 832 188 0 0 chr17 2565476 2565609 -82872871 + FLAM_C SINE Alu 1 133 0 2258 89 0 0 chr17 2565824 2566105 -82872375 - AluSx SINE Alu -30 282 2 1158 201 82 11 chr17 2566129 2566408 -82872072 + L1MB2 LINE L1 5868 6166 -5 2058 109 31 14 chr17 2566408 2566701 -82871779 - AluSx SINE Alu -14 298 1 2185 125 3 0 chr17 2566983 2567287 -82871193 + AluSq SINE Alu 1 305 -8 333 137 0 0 chr17 2567379 2567430 -82871050 - Alu SINE Alu -253 55 5 317 269 82 113 chr17 2567921 2568371 -82870109 + L2 LINE L2 2837 3272 0 442 201 8 8 chr17 2568371 2568505 -82869975 + (TGGA)n Simple_repeat Simple_repeat 2 135 0 203 376 24 8 chr17 2568517 2568642 -82869838 + (TGGG)n Simple_repeat Simple_repeat 1 127 0 190 337 58 0 chr17 2568661 2568747 -82869733 - MIR SINE MIR -113 149 59 260 225 202 0 chr17 2569500 2569589 -82868891 + MIR3 SINE MIR 82 188 -20 391 279 51 7 chr17 2570025 2570199 -82868281 + MIR3 SINE MIR 4 184 -67 414 269 30 78 chr17 2571497 2571560 -82866920 + MER5B DNA MER1_type 1 65 -113 2386 102 3 3 chr17 2571560 2571873 -82866607 + AluSq SINE Alu 1 313 0 414 269 30 78 chr17 2571873 2571976 -82866504 + MER5B DNA MER1_type 65 159 -19 1337 217 174 49 chr17 2573880 2574283 -82864197 + L2 LINE L2 2607 2958 -355 2368 93 0 0 chr17 2574283 2574583 -82863897 - AluSc SINE Alu -9 300 1 1337 217 174 49 chr17 2574583 2574794 -82863686 + L2 LINE L2 2958 3313 0 910 116 20 20 chr17 2575057 2575204 -82863276 + AluSg/x SINE Alu 161 307 -5 304 286 18 78 chr17 2575214 2575431 -82863049 + L1ME1 LINE L1 5955 6158 -8 2330 108 0 3 chr17 2625776 2626090 -82812390 - AluSp SINE Alu 0 313 1 295 367 72 4 chr17 2626117 2626354 -82812126 + L2 LINE L2 2724 2976 -338 278 284 102 31 chr17 2626505 2626632 -82811848 + L2 LINE L2 3176 3311 -2 2367 104 0 0 chr17 2626981 2627289 -82811191 - AluSx SINE Alu -4 308 1 2014 125 0 3 chr17 2627910 2628199 -82810281 + AluSx SINE Alu 22 309 -3 258 105 0 0 chr17 2628220 2628258 -82810222 + (GGGA)n Simple_repeat Simple_repeat 4 41 0 269 298 21 0 chr17 2629028 2629122 -82809358 + L1ME LINE L1 5558 5653 -468 6111 18 0 0 chr17 2629397 2630080 -82808400 + L1PA3 LINE L1 5408 6090 -65 500 246 8 45 chr17 2630654 2630788 -82807692 - MIR SINE MIR -13 249 121 267 31 0 0 chr17 2631345 2631377 -82807103 + (TTCA)n Simple_repeat Simple_repeat 2 33 0 11100 117 31 48 chr17 2632170 2632605 -82805875 - Tigger1 DNA MER2_type 0 2418 1977 2149 121 0 7 chr17 2632605 2632911 -82805569 - AluSx SINE Alu -8 304 1 11100 117 31 48 chr17 2632911 2633776 -82804704 - Tigger1 DNA MER2_type -441 1977 1153 2476 67 0 7 chr17 2633776 2634081 -82804399 + AluY SINE Alu 1 298 -13 11100 117 31 48 chr17 2634081 2634649 -82803831 - Tigger1 DNA MER2_type -1265 1153 577 223 327 27 9 chr17 2635033 2635143 -82803337 + L2 LINE L2 2971 3082 -190 648 184 0 0 chr17 2635208 2635317 -82803163 - MER63 DNA MER1_type 0 1061 953 1649 127 19 0 chr17 2635323 2635582 -82802898 + L1MA9 LINE L1 6044 6307 -5 896 242 33 25 chr17 2635611 2635671 -82802809 - MER63 DNA MER1_type -96 965 907 2044 125 0 3 chr17 2635671 2635958 -82802522 + AluSx SINE Alu 1 288 -24 197 32 0 32 chr17 2635958 2635989 -82802491 + (TTAA)n Simple_repeat Simple_repeat 3 32 0 2044 125 0 3 chr17 2635989 2636004 -82802476 + AluSx SINE Alu 288 302 -10 896 242 33 25 chr17 2636004 2636187 -82802293 - MER63 DNA MER1_type -154 907 720 887 170 105 0 chr17 2636189 2636389 -82802091 + MER44D DNA MER2_type 1 491 -118 2042 93 11 0 chr17 2636445 2636723 -82801757 + AluSx SINE Alu 30 310 -2 288 127 28 42 chr17 2636725 2636796 -82801684 - MER63 DNA MER1_type -740 190 121 * 724 149 0 25 chr17 2636794 2636915 -82801565 + MER44D DNA MER2_type 488 605 0 * 2147 189 38 34 chr17 2636915 2637315 -82801165 - MER63C DNA MER1_type -472 588 191 2143 117 3 0 chr17 2637315 2637622 -82800858 + AluSx SINE Alu 1 308 -4 2147 189 38 34 chr17 2637622 2637772 -82800708 - MER63C DNA MER1_type -869 191 33 258 32 0 0 chr17 2637772 2637803 -82800677 + (CA)n Simple_repeat Simple_repeat 2 32 0 2147 189 38 34 chr17 2637803 2637837 -82800643 - MER63C DNA MER1_type -1027 33 1 220 281 0 0 chr17 2637975 2638032 -82800448 + MIR SINE MIR 87 143 -65 832 188 0 0 chr17 2638568 2638701 -82799779 + FLAM_C SINE Alu 1 133 0 2143 89 0 0 chr17 2638916 2639197 -82799283 - AluSx SINE Alu -30 282 2 1170 201 82 11 chr17 2639221 2639500 -82798980 + L1MB2 LINE L1 5868 6166 -5 1937 109 31 14 chr17 2639500 2639793 -82798687 - AluSx SINE Alu -14 298 1 2074 125 3 0 chr17 2640075 2640379 -82798101 + AluSq SINE Alu 1 305 -8 348 137 0 0 chr17 2640471 2640522 -82797958 - Alu SINE Alu -245 55 5 333 291 98 85 chr17 2641064 2641463 -82797017 + L2 LINE L2 2869 3272 0 442 201 8 8 chr17 2641463 2641597 -82796883 + (TGGA)n Simple_repeat Simple_repeat 2 135 0 203 376 24 8 chr17 2641609 2641734 -82796746 + (TGGG)n Simple_repeat Simple_repeat 1 127 0 184 337 58 0 chr17 2641753 2641839 -82796641 - MIR SINE MIR -113 149 59 6981 55 17 0 chr17 2642935 2643902 -82794578 - L1PA8A LINE L1 -4 6127 5163 246 321 57 21 chr17 2645110 2645250 -82793230 + MIR3 SINE MIR 8 152 -56 237 280 196 9 chr17 2645745 2645852 -82792628 - L3 LINE CR1 -4 1573 1447 25 31 0 0 chr17 2647764 2647796 -82790684 + AT_rich Low_complexity Low_complexity 1 32 0 2313 105 0 0 chr17 2647814 2648127 -82790353 - AluSq SINE Alu 0 313 1 404 233 60 17 chr17 2648181 2648297 -82790183 - MIR3 SINE MIR -6 202 82 1926 111 49 0 chr17 2649127 2649415 -82789065 + AluSq SINE Alu 1 302 -11 2325 97 3 0 chr17 2649653 2649962 -82788518 + AluSq SINE Alu 1 310 -3 1081 88 0 0 chr17 2650475 2650612 -82787868 + AluSq/x SINE Alu 1 137 -175 1901 126 4 0 chr17 2650612 2650890 -82787590 + AluSx SINE Alu 1 279 -33 473 346 197 10 chr17 2650939 2651084 -82787396 - L3 LINE CR1 -2 1575 1458 1990 134 0 7 chr17 2651084 2651390 -82787090 + AluJb SINE Alu 1 304 -8 473 346 197 10 chr17 2651390 2651555 -82786925 - L3 LINE CR1 -119 1458 1325 2108 138 0 3 chr17 2651555 2651867 -82786613 - AluSx SINE Alu -1 311 1 473 346 197 10 chr17 2651867 2652159 -82786321 - L3 LINE CR1 -252 1325 859 238 149 149 0 chr17 2652198 2652245 -82786235 + MER5A DNA MER1_type 45 98 -91 1073 96 11 0 chr17 2653073 2653250 -82785230 + (TGGA)n Simple_repeat Simple_repeat 1 179 0 780 121 0 0 chr17 2653266 2653398 -82785082 + (TGGA)n Simple_repeat Simple_repeat 3 134 0 203 167 0 21 chr17 2653520 2653568 -82784912 + C-rich Low_complexity Low_complexity 2 48 0 338 266 156 40 chr17 2653917 2654218 -82784262 - L2 LINE L2 -11 3261 2926 1988 108 3 0 chr17 2654353 2654641 -82783839 + AluSq SINE Alu 21 309 -4 811 148 0 21 chr17 2655137 2655279 -82783201 - AluJo SINE Alu 0 312 174 456 149 0 14 chr17 2655434 2655508 -82782972 - AluJo SINE Alu -146 166 94 382 281 51 7 chr17 2656070 2656244 -82782236 + MIR3 SINE MIR 4 184 -67 419 309 51 34 chr17 2657542 2657605 -82780875 + MER5B DNA MER1_type 1 61 -117 2070 96 3 17 chr17 2657605 2657930 -82780550 + AluSq SINE Alu 1 313 0 419 309 51 34 chr17 2657930 2658041 -82780439 + MER5B DNA MER1_type 61 178 0 1235 225 171 45 chr17 2659927 2660330 -82778150 + L2 LINE L2 2607 2958 -355 2253 93 0 0 chr17 2660330 2660631 -82777849 - AluSc SINE Alu -8 301 1 1235 225 171 45 chr17 2660631 2660842 -82777638 + L2 LINE L2 2958 3313 0 850 128 20 34 chr17 2661105 2661253 -82777227 + AluSc SINE Alu 159 304 -5 352 290 18 77 chr17 2661259 2661480 -82777000 + L1ME1 LINE L1 5951 6158 -8 238 267 238 0 chr17 2661605 2661710 -82776770 + MIR SINE MIR 17 146 -62 457 178 12 41 chr17 2661962 2662131 -82776349 + CT-rich Low_complexity Low_complexity 4 167 0 326 302 86 37 chr17 2662254 2662522 -82775958 + L1MC4a LINE L1 5652 5932 -1876 1814 137 7 10 chr17 2662678 2663003 -82775477 + AluJb SINE Alu 1 312 0 23 0 0 0 chr17 2663066 2663089 -82775391 + AT_rich Low_complexity Low_complexity 1 23 0 183 250 132 0 chr17 2663178 2663254 -82775226 - MIR SINE MIR -79 183 98 767 97 142 0 chr17 2663254 2663406 -82775074 + AluSc SINE Alu 154 321 0 293 325 57 8 chr17 2663851 2663974 -82774506 - L2 LINE L2 0 3313 3185 2206 96 0 7 chr17 2664390 2664693 -82773787 + AluSx SINE Alu 1 301 -11 2221 90 10 6 chr17 2665252 2665563 -82772917 - AluSx SINE Alu 0 312 1 365 265 20 10 chr17 2665565 2665667 -82772813 + L2 LINE L2 3169 3271 -1 238 307 44 18 chr17 2666579 2666693 -82771787 + L2 LINE L2 2705 2821 -493 2168 114 3 0 chr17 2667305 2667612 -82770868 - AluSg SINE Alu -2 308 1 2082 99 0 53 chr17 2668021 2668344 -82770136 + AluSx SINE Alu 1 306 -6 203 178 0 22 chr17 2668418 2668463 -82770017 + (CTGGGG)n Simple_repeat Simple_repeat 6 49 0 753 235 18 10 chr17 2668798 2668991 -82769489 - MER4C LTR ERV1 0 456 276 1893 119 26 35 chr17 2669010 2669322 -82769158 + AluSx SINE Alu 1 309 -3 514 165 19 122 chr17 2669364 2669471 -82769009 - MER4C LTR ERV1 -201 349 290 2162 110 0 0 chr17 2669471 2669771 -82768709 + AluSx SINE Alu 7 306 -6 514 165 19 122 chr17 2669771 2669897 -82768583 - MER4C LTR ERV1 -260 290 153 297 261 0 0 chr17 2669934 2669999 -82768481 - MIR SINE MIR -152 110 46 1798 151 35 0 chr17 2670001 2670285 -82768195 + AluSx SINE Alu 1 294 -18 1929 131 3 0 chr17 2670644 2670934 -82767546 + AluSx SINE Alu 1 291 -21 261 375 18 0 chr17 2671584 2671696 -82766784 - MIR SINE MIR -62 146 33 442 222 67 22 chr17 2672072 2672207 -82766273 + MIR3 SINE MIR 33 173 -35 560 277 20 7 chr17 2672544 2672692 -82765788 - L2 LINE L2 -3 3310 3161 851 177 30 3 chr17 2672827 2673206 -82765274 + (TGGA)n Simple_repeat Simple_repeat 1 389 0 770 121 42 0 chr17 2673222 2673388 -82765092 + (TGGA)n Simple_repeat Simple_repeat 1 173 0 2524 56 0 0 chr17 2673827 2674132 -82764348 - AluY SINE Alu -6 305 1 2227 112 0 13 chr17 2675179 2675492 -82762988 - AluSg SINE Alu 0 310 2 225 0 0 0 chr17 2675492 2675517 -82762963 + (TTTTC)n Simple_repeat Simple_repeat 2 26 0 2245 81 0 3 chr17 2675517 2675802 -82762678 - AluSx SINE Alu -28 284 1 314 314 133 26 chr17 2676299 2676751 -82761729 + L2 LINE L2 2306 2805 -509 298 293 73 32 chr17 2677478 2677601 -82760879 - MIR SINE MIR -8 254 127 290 340 112 5 chr17 2678533 2678730 -82759750 - L3 LINE CR1 -396 1181 964 2224 98 3 3 chr17 2679206 2679513 -82758967 + AluSx SINE Alu 4 310 -2 517 304 63 8 chr17 2681617 2681837 -82756643 + MIR SINE MIR 32 260 -2 1404 113 24 0 chr17 2683017 2683230 -82755250 + AluSg/x SINE Alu 95 312 0 2850 150 30 35 chr17 2683358 2683734 -82754746 + L1MC1 LINE L1 5413 5786 -547 2050 130 0 9 chr17 2683734 2684049 -82754431 + AluSx SINE Alu 1 312 0 2850 150 30 35 chr17 2684049 2684239 -82754241 + L1MC1 LINE L1 5786 5976 -357 1986 136 3 3 chr17 2684239 2684541 -82753939 + AluJb SINE Alu 1 302 -10 1926 128 13 13 chr17 2684552 2684856 -82753624 + AluJo SINE Alu 1 304 -8 2114 125 3 0 chr17 2685020 2685323 -82753157 + AluSx SINE Alu 1 304 -8 583 313 99 0 chr17 2685490 2685682 -82752798 + MIR SINE MIR 2 212 -50 10561 49 14 17 chr17 2686048 2687438 -82751042 - SVA Other Other 0 1386 1 216 0 0 0 chr17 2687438 2687462 -82751018 + (GGGAGA)n Simple_repeat Simple_repeat 2 25 0 414 157 14 171 chr17 2687498 2687638 -82750842 - MER58B DNA MER1_type -1 340 223 288 172 0 0 chr17 2687644 2687702 -82750778 + (CA)n Simple_repeat Simple_repeat 2 59 0 2372 91 0 0 chr17 2688243 2688551 -82749929 + AluSq SINE Alu 1 308 -5 2089 130 0 9 chr17 2688562 2688877 -82749603 + AluSq SINE Alu 1 312 -1 2181 97 3 37 chr17 2689432 2689753 -82748727 + AluSq SINE Alu 4 313 0 318 182 11 11 chr17 2690057 2690148 -82748332 + Alu SINE Alu 240 301 0 2651 39 0 0 chr17 2690393 2690704 -82747776 + AluY SINE Alu 1 311 0 368 338 0 0 chr17 2690919 2691058 -82747422 + L1MEc LINE L1 35 173 -6223 2009 128 0 44 chr17 2691112 2691258 -82747222 + AluSx SINE Alu 1 152 -160 3139 38 0 3 chr17 2691258 2691630 -82746850 + L1PA5 LINE L1 5782 6152 -2 2009 128 0 44 chr17 2691630 2691804 -82746676 + AluSx SINE Alu 152 307 -5 370 378 15 5 chr17 2691806 2692010 -82746470 + L1MEc LINE L1 165 370 -6026 714 154 18 77 chr17 2692375 2692460 -82746020 + L1MB4 LINE L1 5978 6067 -113 1917 86 79 7 chr17 2692460 2692740 -82745740 + AluSx SINE Alu 1 300 -12 714 154 18 77 chr17 2692740 2692863 -82745617 + L1MB4 LINE L1 6067 6174 -6 2255 97 0 10 chr17 2693060 2693368 -82745112 - AluSx SINE Alu -7 305 1 844 258 22 45 chr17 2694903 2695048 -82743432 + MIR SINE MIR 2 140 -122 2276 110 0 0 chr17 2695048 2695357 -82743123 + AluSx SINE Alu 1 309 -3 844 258 22 45 chr17 2695357 2695478 -82743002 + MIR SINE MIR 140 262 0 419 238 98 0 chr17 2696459 2696581 -82741899 - MER91B DNA MER1_type -56 134 1 2645 199 30 47 chr17 2696989 2697011 -82741469 + L1MC4 LINE L1 6907 6928 -1114 1905 80 113 0 chr17 2697011 2697286 -82741194 + AluSx SINE Alu 1 306 -6 2645 199 30 47 chr17 2697286 2697547 -82740933 + L1MC4 LINE L1 6928 7192 -850 2104 118 0 0 chr17 2697547 2697843 -82740637 + AluSx SINE Alu 3 298 -14 2645 199 30 47 chr17 2697843 2698288 -82740192 + L1MC4 LINE L1 7192 7624 -418 1820 115 39 21 chr17 2698288 2698574 -82739906 + AluSx SINE Alu 1 291 -21 2289 95 0 22 chr17 2698579 2698714 -82739766 + AluSx SINE Alu 1 137 -175 2323 79 0 0 chr17 2698714 2699012 -82739468 + AluY SINE Alu 1 299 -8 270 81 0 0 chr17 2699012 2699049 -82739431 + (TA)n Simple_repeat Simple_repeat 2 38 0 2289 95 0 22 chr17 2699053 2699234 -82739246 + AluSx SINE Alu 137 310 -2 2078 95 0 18 chr17 2700376 2700715 -82737765 + AluSg SINE Alu 1 334 0 1155 134 70 0 chr17 2700727 2700913 -82737567 + AluSx SINE Alu 1 199 -113 3096 144 8 16 chr17 2701034 2701548 -82736932 + L1PA16 LINE L1 5651 6160 -6 2224 107 0 0 chr17 2701826 2702125 -82736355 - AluSx SINE Alu -13 299 1 504 154 5 199 chr17 2702175 2702376 -82736104 + MER20 DNA MER1_type 1 162 -57 200 204 45 0 chr17 2702680 2702724 -82735756 - L2 LINE L2 -2 3311 3266 2280 77 7 7 chr17 2703083 2703382 -82735098 + AluSx SINE Alu 1 299 -13 623 136 164 9 chr17 2703493 2703603 -82734877 - FLAM_A SINE Alu -6 136 10 2352 68 0 3 chr17 2703953 2704247 -82734233 + AluSc SINE Alu 1 293 -16 2562 61 0 0 chr17 2704256 2704567 -82733913 + AluY SINE Alu 1 311 0 978 189 0 0 chr17 2704587 2704751 -82733729 + FRAM SINE Alu 2 165 -1 2216 91 3 7 chr17 2705039 2705335 -82733145 + AluSq SINE Alu 6 300 -13 2211 85 26 0 chr17 2706359 2706664 -82731816 + AluSp SINE Alu 1 313 0 928 93 0 0 chr17 2706666 2706795 -82731685 + AluY SINE Alu 175 303 -8 2145 109 3 0 chr17 2706873 2707167 -82731313 + AluSx SINE Alu 1 295 -17 2101 116 3 3 chr17 2707507 2707809 -82730671 - AluSp SINE Alu -11 302 1 214 296 167 9 chr17 2708441 2708549 -82729931 + MIR3 SINE MIR 48 172 -36 2045 122 3 3 chr17 2708848 2709156 -82729324 + AluSx SINE Alu 1 308 0 385 363 163 7 chr17 2709214 2709514 -82728966 - L3 LINE CR1 -39 1538 1192 1979 126 20 0 chr17 2709895 2710189 -82728291 + AluSp SINE Alu 1 300 -13 202 189 0 0 chr17 2710464 2710501 -82727979 + (CTGGGG)n Simple_repeat Simple_repeat 1 37 0 2123 119 0 22 chr17 2710884 2711202 -82727278 + AluSq SINE Alu 1 311 -2 530 202 0 29 chr17 2711343 2711447 -82727033 + AluJo SINE Alu 120 220 -92 2053 140 16 0 chr17 2711554 2711861 -82726619 - AluSx SINE Alu 0 312 1 192 291 0 0 chr17 2715027 2715082 -82723398 + MIR SINE MIR 92 146 -62 252 0 0 0 chr17 2715441 2715469 -82723011 + (TG)n Simple_repeat Simple_repeat 2 29 0 1214 109 0 0 chr17 2715469 2715634 -82722846 - AluSg/x SINE Alu -40 272 108 2424 62 7 10 chr17 2716169 2716478 -82722002 + AluSq SINE Alu 3 310 -3 246 32 0 0 chr17 2716478 2716509 -82721971 + (CAG)n Simple_repeat Simple_repeat 2 32 0 237 143 24 0 chr17 2716672 2716714 -82721766 - MER57A LTR ERV1 -66 337 295 658 243 106 23 chr17 2717488 2717706 -82720774 - MIR SINE MIR -19 243 8 234 0 0 0 chr17 2718619 2718645 -82719835 + (TCCA)n Simple_repeat Simple_repeat 1 26 0 584 265 82 0 chr17 2719002 2719172 -82719308 - MIR SINE MIR -22 240 57 377 172 98 163 chr17 2719927 2719991 -82718489 - MER105 DNA DNA -1 203 136 2246 109 0 0 chr17 2719991 2720295 -82718185 - AluSg SINE Alu -6 304 1 377 172 98 163 chr17 2720295 2720445 -82718035 - MER105 DNA DNA -68 136 3 192 345 0 0 chr17 2720734 2720789 -82717691 - MIR SINE MIR -109 153 99 2304 89 0 3 chr17 2720887 2721190 -82717290 - AluSx SINE Alu -10 302 1 2223 84 3 3 chr17 2721280 2721567 -82716913 + AluSq SINE Alu 1 287 -26 22 0 0 0 chr17 2721567 2721589 -82716891 + AT_rich Low_complexity Low_complexity 1 22 0 3148 134 23 44 chr17 2721589 2721943 -82716537 - L1MB3 LINE L1 -7 6176 5837 2038 134 27 0 chr17 2721943 2722242 -82716238 - AluSg SINE Alu -3 307 1 3148 134 23 44 chr17 2722242 2722460 -82716020 - L1MB3 LINE L1 -346 5837 5616 2038 117 0 3 chr17 2722629 2722939 -82715541 + AluSx SINE Alu 1 309 0 1379 177 42 28 chr17 2723929 2724217 -82714263 - AluJo SINE Alu -20 292 1 546 275 35 18 chr17 2724324 2724495 -82713985 - MIR SINE MIR -10 252 79 2347 63 6 19 chr17 2725163 2725480 -82713000 + AluSp SINE Alu 1 313 0 204 346 122 39 chr17 2725727 2725932 -82712548 + MIR SINE MIR 7 228 -34 191 322 132 25 chr17 2726447 2726568 -82711912 - L2 LINE L2 -260 3053 2920 2411 82 0 19 chr17 2726639 2726957 -82711523 + AluSx SINE Alu 1 312 0 503 294 69 20 chr17 2727426 2727549 -82710931 + MIR SINE MIR 49 187 -75 1984 141 0 3 chr17 2727549 2727846 -82710634 + AluSx SINE Alu 1 296 -16 503 294 69 20 chr17 2727846 2727926 -82710554 + MIR SINE MIR 187 262 0 866 255 30 64 chr17 2728211 2728271 -82710209 - MLT1I LTR MaLR -15 394 334 234 0 0 0 chr17 2728271 2728297 -82710183 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 2028 97 0 11 chr17 2728300 2728579 -82709901 - AluSx SINE Alu -31 281 6 866 255 30 64 chr17 2728579 2728812 -82709668 - MLT1I LTR MaLR -77 332 107 2163 103 14 0 chr17 2729388 2729680 -82708800 + AluSx SINE Alu 1 296 -16 2392 183 106 111 chr17 2729682 2729861 -82708619 - MER44D DNA MER2_type -1882 605 427 2243 111 0 0 chr17 2729861 2730159 -82708321 - AluSx SINE Alu -14 298 1 2392 183 106 111 chr17 2730159 2730255 -82708225 - MER44D DNA MER2_type -2060 427 332 2114 127 13 0 chr17 2730255 2730562 -82707918 + AluSx SINE Alu 1 311 -1 2392 183 106 111 chr17 2730562 2731022 -82707458 - MER44D DNA MER2_type -2155 332 1 2126 103 21 0 chr17 2731218 2731509 -82706971 - AluSx SINE Alu -15 297 1 252 0 0 0 chr17 2731646 2731674 -82706806 + (GA)n Simple_repeat Simple_repeat 1 28 0 2338 89 0 0 chr17 2733610 2733913 -82704567 + AluSq SINE Alu 1 303 -10 1955 138 20 13 chr17 2734122 2734427 -82704053 - AluSx SINE Alu -5 307 1 2081 128 3 0 chr17 2734468 2734766 -82703714 + AluSx SINE Alu 1 299 -13 416 302 16 1 chr17 2734874 2735007 -82703473 - MER5B DNA MER1_type -40 149 1 253 316 158 38 chr17 2735033 2735075 -82703405 - MER5A DNA MER1_type -1 188 152 2383 74 0 0 chr17 2735075 2735372 -82703108 - AluSg SINE Alu -13 297 1 253 316 158 38 chr17 2735372 2735487 -82702993 - MER5A DNA MER1_type -37 152 12 566 236 52 40 chr17 2735507 2735681 -82702799 + MER5B DNA MER1_type 1 176 -2 1944 96 0 0 chr17 2735742 2735991 -82702489 - AluSx SINE Alu -63 249 1 848 158 0 15 chr17 2736048 2736181 -82702299 - FLAM_A SINE Alu -2 131 1 243 310 100 0 chr17 2736437 2736537 -82701943 - MIR SINE MIR -73 135 26 2267 70 0 3 chr17 2736565 2736877 -82701603 + AluY SINE Alu 1 311 0 2433 83 0 0 chr17 2736888 2737200 -82701280 + AluSx SINE Alu 1 312 0 2285 97 0 0 chr17 2738174 2738473 -82700007 - AluSg1 SINE Alu -10 299 1 1511 196 72 19 chr17 2738473 2738954 -82699526 + MLT1F LTR MaLR 35 542 0 2116 117 3 3 chr17 2739049 2739358 -82699122 - AluSg SINE Alu -1 309 1 1096 82 0 0 chr17 2739358 2739493 -82698987 - AluSq/x SINE Alu -178 135 1 358 223 71 9 chr17 2739644 2739756 -82698724 + MER57-int LTR ERV1 127 245 -7292 516 86 26 192 chr17 2740145 2740296 -82698184 + MER57-int LTR ERV1 1177 1302 -3569 367 228 70 70 chr17 2740296 2740423 -82698057 + MER93b LTR ERV1 199 328 -45 2198 109 0 3 chr17 2740423 2740726 -82697754 - AluSg1 SINE Alu -7 302 1 367 228 70 70 chr17 2740726 2740756 -82697724 + MER93b LTR ERV1 327 356 -17 1230 156 7 48 chr17 2740786 2740821 -82697659 - L1M4 LINE L1 -391 5793 5758 2338 82 0 3 chr17 2740821 2741115 -82697365 + AluSc SINE Alu 1 293 -16 1230 156 7 48 chr17 2741115 2741348 -82697132 - L1M4 LINE L1 -426 5758 5536 2168 101 0 3 chr17 2741776 2742072 -82696408 + AluSc SINE Alu 1 295 -14 1179 181 23 30 chr17 2742254 2742520 -82695960 + MER58B DNA MER1_type 78 341 0 2338 73 0 20 chr17 2742586 2742889 -82695591 - AluY SINE Alu -14 297 1 2331 68 3 0 chr17 2742890 2743182 -82695298 - AluSg1 SINE Alu -16 293 1 773 163 6 17 chr17 2743796 2743968 -82694512 + CT-rich Low_complexity Low_complexity 2 171 0 2302 106 0 0 chr17 2743968 2744280 -82694200 - AluSx SINE Alu 0 312 1 1109 159 17 0 chr17 2744282 2744458 -82694022 - AluJb SINE Alu -16 296 118 2446 70 0 3 chr17 2745024 2745336 -82693144 - AluSx SINE Alu -1 311 1 221 270 0 40 chr17 2746122 2746196 -82692284 + MIR SINE MIR 85 155 -107 256 315 9 28 chr17 2746690 2746798 -82691682 + MIR SINE MIR 31 136 -126 1953 133 0 3 chr17 2746971 2747286 -82691194 - AluSx SINE Alu 0 314 1 2193 245 45 13 chr17 2747556 2748094 -82690386 + MLT1H1 LTR MaLR 1 555 0 2287 98 0 0 chr17 2748102 2748408 -82690072 + AluSx SINE Alu 1 306 -6 541 298 55 36 chr17 2748411 2748740 -82689740 - HAL1 LINE L1 -963 1544 1210 2208 82 0 23 chr17 2748768 2749071 -82689409 + AluY SINE Alu 4 299 -12 1084 140 0 28 chr17 2749071 2749249 -82689231 + AluSq SINE Alu 135 307 -6 509 283 69 24 chr17 2749251 2749579 -82688901 - L1M4 LINE L1 -656 5522 5182 263 206 27 0 chr17 2750564 2750637 -82687843 + L1MC5 LINE L1 7832 7906 -55 2385 84 0 0 chr17 2750652 2750950 -82687530 - AluSg SINE Alu -12 298 1 1830 166 0 13 chr17 2750974 2751282 -82687198 - AluJo SINE Alu -8 304 1 227 324 152 0 chr17 2751294 2751399 -82687081 - L3 LINE CR1 -118 1459 1339 465 332 76 5 chr17 2751433 2751644 -82686836 + MIR SINE MIR 18 243 -19 2311 93 10 0 chr17 2751778 2752079 -82686401 + AluSq SINE Alu 1 304 -9 2169 85 0 20 chr17 2752905 2753200 -82685280 + AluSx SINE Alu 1 289 -23 850 189 148 71 chr17 2753722 2753845 -82684635 + MER33 DNA MER1_type 4 116 -2469 2306 103 3 0 chr17 2753845 2754156 -82684324 - AluSx SINE Alu 0 312 1 850 189 148 71 chr17 2754156 2754299 -82684181 + MER33 DNA MER1_type 116 298 -2287 2246 79 7 0 chr17 2754299 2754589 -82683891 - AluSc SINE Alu -17 292 1 850 189 148 71 chr17 2754589 2754618 -82683862 + MER33 DNA MER1_type 298 323 -1 504 204 11 0 chr17 2754636 2754729 -82683751 + AluJ/FLAM SINE Alu 1 94 -218 258 195 0 91 chr17 2755060 2755137 -82683343 - MIR3 SINE MIR -38 170 101 2394 78 0 7 chr17 2755306 2755614 -82682866 - AluSx SINE Alu -6 306 1 1112 182 47 23 chr17 2755632 2755846 -82682634 + MER20 DNA MER1_type 1 219 0 5228 21 0 0 chr17 2756040 2756614 -82681866 + SVA Other Other 809 1382 -4 2196 111 0 7 chr17 2756622 2756929 -82681551 + AluSx SINE Alu 2 306 -6 2011 116 0 0 chr17 2757222 2757497 -82680983 + AluSx SINE Alu 1 275 -37 739 47 0 19 chr17 2757508 2757614 -82680866 + (GGAA)n Simple_repeat Simple_repeat 4 107 0 2307 33 0 0 chr17 2757614 2757887 -82680593 - AluY SINE Alu -38 273 1 299 171 198 36 chr17 2759702 2759813 -82678667 - MER106A DNA MER1_type -56 180 52 2369 60 0 10 chr17 2759817 2760118 -82678362 - AluSx SINE Alu -14 298 1 2262 104 0 0 chr17 2760578 2760876 -82677604 - AluSq SINE Alu -15 298 1 2211 102 0 0 chr17 2761727 2762021 -82676459 + AluSx SINE Alu 4 297 -15 22 56 0 0 chr17 2762021 2762057 -82676423 + AT_rich Low_complexity Low_complexity 1 36 0 1767 164 0 23 chr17 2762961 2763265 -82675215 + AluJo SINE Alu 6 302 -10 243 324 29 19 chr17 2763502 2763607 -82674873 + MARNA DNA Mariner 62 167 -419 2287 100 0 3 chr17 2763713 2764023 -82674457 - AluSg SINE Alu -1 309 1 630 174 0 0 chr17 2764374 2764512 -82673968 + (TG)n Simple_repeat Simple_repeat 1 138 0 307 283 19 9 chr17 2764580 2764686 -82673794 - MIR SINE MIR -43 165 59 2243 98 3 3 chr17 2764752 2765057 -82673423 + AluSx SINE Alu 1 305 -7 497 264 71 13 chr17 2765224 2765379 -82673101 + MIR SINE MIR 2 165 -97 2317 81 0 0 chr17 2765379 2765675 -82672805 + AluY SINE Alu 1 296 -15 1172 170 0 77 chr17 2765793 2765921 -82672559 + AluJb SINE Alu 1 101 -211 2070 104 14 7 chr17 2765921 2766209 -82672271 - AluSx SINE Alu -22 290 1 1172 170 0 77 chr17 2766209 2766339 -82672141 + AluJb SINE Alu 101 239 -73 714 258 57 0 chr17 2766480 2766674 -82671806 - MIR SINE MIR 0 262 58 2289 103 0 0 chr17 2766795 2767106 -82671374 - AluY SINE Alu 0 311 1 917 135 0 0 chr17 2767110 2767243 -82671237 - AluSq/x SINE Alu -180 133 1 2228 119 0 0 chr17 2767920 2768222 -82670258 + AluSx SINE Alu 1 302 -10 2099 115 10 7 chr17 2768625 2768929 -82669551 - AluSc SINE Alu -4 305 1 790 176 0 47 chr17 2768931 2769079 -82669401 - FLAM_C SINE Alu -2 141 1 2131 109 0 10 chr17 2771512 2771814 -82666666 + AluSx SINE Alu 3 301 -11 263 284 226 0 chr17 2771878 2771980 -82666500 + MER5A DNA MER1_type 59 183 -6 912 131 25 175 chr17 2772201 2772321 -82666159 + L1MA9 LINE L1 6036 6125 -187 229 175 0 0 chr17 2772321 2772361 -82666119 + Alu SINE Alu 135 174 -134 912 131 25 175 chr17 2772361 2772521 -82665959 + L1MA9 LINE L1 6125 6307 -5 971 211 11 0 chr17 2772665 2772850 -82665630 + AluJo SINE Alu 121 307 -5 2221 110 3 0 chr17 2773136 2773445 -82665035 - AluSx SINE Alu -2 310 1 2065 107 14 0 chr17 2773454 2773734 -82664746 - AluSx SINE Alu -28 284 1 399 287 100 10 chr17 2773781 2774017 -82664463 + L1ME3A LINE L1 5907 6162 0 2377 87 0 6 chr17 2774033 2774345 -82664135 + AluSx SINE Alu 1 310 -2 371 301 32 75 chr17 2774526 2774657 -82663823 + MIR SINE MIR 84 206 -56 2147 125 0 0 chr17 2774657 2774953 -82663527 + AluSq SINE Alu 1 296 -17 371 301 32 75 chr17 2774953 2775007 -82663473 + MIR SINE MIR 206 261 -1 847 82 16 16 chr17 2775343 2775465 -82663015 + FRAM SINE Alu 18 139 -37 2066 105 3 3 chr17 2775477 2775763 -82662717 + AluSx SINE Alu 1 286 -26 2231 108 0 0 chr17 2775943 2776239 -82662241 + AluSp SINE Alu 3 298 -15 476 286 71 18 chr17 2776495 2776663 -82661817 - MIR SINE MIR -23 239 63 2306 87 0 22 chr17 2776740 2777052 -82661428 + AluSx SINE Alu 1 305 -7 791 105 0 0 chr17 2777062 2777167 -82661313 + FLAM_C SINE Alu 1 105 -38 364 267 25 25 chr17 2778430 2778591 -82659889 + C-rich Low_complexity Low_complexity 5 165 0 310 298 17 44 chr17 2778613 2778794 -82659686 + C-rich Low_complexity Low_complexity 5 180 0 220 271 17 0 chr17 2779427 2779486 -82658994 + GA-rich Low_complexity Low_complexity 4 63 0 308 296 65 0 chr17 2781695 2781803 -82656677 - MIR SINE MIR -113 149 35 2264 101 0 0 chr17 2784380 2784677 -82653803 + AluSq SINE Alu 1 297 -16 240 35 0 0 chr17 2788095 2788124 -82650356 + (A)n Simple_repeat Simple_repeat 1 29 0 2371 67 10 0 chr17 2789416 2789716 -82648764 + AluSx SINE Alu 1 303 -9 653 257 48 62 chr17 2792207 2792239 -82646241 - MIR SINE MIR 0 262 231 2242 97 0 19 chr17 2792239 2792549 -82645931 + AluSx SINE Alu 1 304 -8 653 257 48 62 chr17 2792549 2792745 -82645735 - MIR SINE MIR -31 231 38 2116 99 7 20 chr17 2792938 2793240 -82645240 + AluSx SINE Alu 1 298 -14 2370 73 3 0 chr17 2793353 2793653 -82644827 + AluSp SINE Alu 1 301 -12 1525 157 52 28 chr17 2793704 2793990 -82644490 + AluJb SINE Alu 3 295 -17 278 343 72 12 chr17 2794128 2794294 -82644186 - L2 LINE L2 -214 3058 2883 507 155 10 62 chr17 2794331 2794428 -82644052 + FRAM SINE Alu 4 95 -81 282 247 62 0 chr17 2794888 2794969 -82643511 - L1ME LINE L1 -343 5778 5693 2170 110 0 25 chr17 2795253 2795571 -82642909 + AluSg SINE Alu 1 310 0 255 313 115 0 chr17 2796230 2796326 -82642154 - MIR3 SINE MIR -11 197 91 2313 50 9 40 chr17 2796381 2796702 -82641778 + AluY SINE Alu 1 311 0 708 335 80 15 chr17 2797042 2797379 -82641101 + L2 LINE L2 2914 3272 0 2172 95 3 3 chr17 2797398 2797694 -82640786 - AluSx SINE Alu -16 296 1 2243 88 7 3 chr17 2797909 2798205 -82640275 - AluSg SINE Alu -13 297 1 257 272 237 18 chr17 2798987 2799101 -82639379 - MER5A DNA MER1_type 0 189 51 2247 102 0 0 chr17 2799134 2799437 -82639043 + AluSx SINE Alu 1 303 -9 759 266 58 0 chr17 2801485 2801673 -82636807 + MIR SINE MIR 43 241 -21 251 318 24 56 chr17 2803902 2804028 -82634452 - MIR3 SINE MIR 0 208 87 367 288 52 38 chr17 2804390 2804584 -82633896 - MIR SINE MIR -51 211 18 244 338 176 7 chr17 2804611 2804747 -82633733 - L2 LINE L2 -2 3270 3112 2372 89 0 3 chr17 2805112 2805425 -82633055 + AluSq SINE Alu 2 313 0 2359 76 10 0 chr17 2805819 2806122 -82632358 + AluSx SINE Alu 1 306 -6 405 176 14 0 chr17 2806616 2806690 -82631790 + MER20 DNA MER1_type 73 147 -72 1822 147 7 3 chr17 2806690 2806976 -82631504 + AluJo SINE Alu 1 287 -25 2239 98 3 3 chr17 2807195 2807501 -82630979 - AluSp SINE Alu -7 306 1 657 209 0 0 chr17 2810750 2810903 -82627577 + (CA)n Simple_repeat Simple_repeat 1 153 0 1946 71 61 46 chr17 2812958 2813261 -82625219 + AluY SINE Alu 1 307 0 190 259 306 0 chr17 2813316 2813401 -82625079 + MIR SINE MIR 69 179 -83 394 130 0 0 chr17 2813402 2813471 -82625009 + L1MC4 LINE L1 7475 7543 -499 1722 162 47 0 chr17 2813478 2813775 -82624705 + AluJb SINE Alu 1 311 -1 1704 179 12 66 chr17 2813794 2814373 -82624107 + L1MB5 LINE L1 5099 5659 -525 2113 113 0 19 chr17 2814373 2814692 -82623788 + AluSq SINE Alu 1 313 0 1704 179 12 66 chr17 2814692 2814743 -82623737 + L1MB5 LINE L1 5659 5711 -473 285 109 31 47 chr17 2814744 2814808 -82623672 - AluSq SINE Alu -1 301 239 1153 144 0 28 chr17 2814808 2814988 -82623492 - AluSq SINE Alu -137 176 2 1076 186 4 30 chr17 2814991 2815227 -82623253 + L1MB5 LINE L1 5730 5959 -215 1480 81 5 10 chr17 2815227 2815425 -82623055 - AluSx SINE Alu -115 197 1 557 196 22 22 chr17 2815480 2815618 -82622862 + MLT1B LTR MaLR 205 342 -48 22 35 0 0 chr17 2817068 2817097 -82621383 + GC_rich Low_complexity Low_complexity 1 29 0 219 69 0 0 chr17 2817180 2817209 -82621271 + (TCC)n Simple_repeat Simple_repeat 1 29 0 2238 60 50 10 chr17 2817359 2817659 -82620821 - AluSx SINE Alu 0 312 1 329 330 54 0 chr17 2818513 2818625 -82619855 - MER5A DNA MER1_type -9 180 63 471 337 125 24 chr17 2818651 2818948 -82619532 + L2 LINE L2 2986 3312 -1 1290 179 0 48 chr17 2819843 2819968 -82618512 + AluJo SINE Alu 1 130 -182 480 18 0 0 chr17 2819968 2820025 -82618455 + (CA)n Simple_repeat Simple_repeat 2 58 0 1290 179 0 48 chr17 2820025 2820043 -82618437 + AluJo SINE Alu 130 147 -165 1816 139 17 10 chr17 2820043 2820331 -82618149 + AluJo SINE Alu 1 290 -22 1290 179 0 48 chr17 2820331 2820437 -82618043 + AluJo SINE Alu 147 239 -73 2036 119 0 0 chr17 2820455 2820879 -82617601 + AluSg SINE Alu 2 425 0 261 263 105 26 chr17 2820885 2820999 -82617481 - MER112 DNA MER1_type -136 124 2 2270 91 0 0 chr17 2821150 2821446 -82617034 + AluSg SINE Alu 1 296 -14 1535 181 24 0 chr17 2821518 2821811 -82616669 + MSTB LTR MaLR 1 300 -126 1329 101 105 5 chr17 2822035 2822244 -82616236 - MER30 DNA MER1_type 0 230 1 2276 96 3 6 chr17 2822309 2822621 -82615859 + AluSp SINE Alu 3 313 0 1892 96 0 76 chr17 2822650 2822951 -82615529 - AluSx SINE Alu -4 308 31 4392 89 189 23 chr17 2822951 2823659 -82614821 + LTR12 LTR ERV1 1 826 0 1558 165 9 71 chr17 2824084 2824406 -82614074 + AluJo SINE Alu 1 302 -10 2398 76 0 13 chr17 2824680 2824997 -82613483 + AluSp SINE Alu 1 313 0 2197 109 3 3 chr17 2825590 2825894 -82612586 + AluSp SINE Alu 1 304 -9 1708 168 0 26 chr17 2826666 2826826 -82611654 - AluJb SINE Alu -17 295 145 2140 110 3 3 chr17 2826826 2827118 -82611362 - AluSc SINE Alu -17 292 1 1708 168 0 26 chr17 2827118 2827260 -82611220 - AluJb SINE Alu -167 145 1 1800 85 0 0 chr17 2827536 2827771 -82610709 - AluSc SINE Alu -70 239 5 651 236 109 0 chr17 2827771 2828000 -82610480 + Charlie4a DNA MER1_type 159 412 -96 2534 56 0 0 chr17 2828642 2828944 -82609536 + AluY SINE Alu 1 302 -9 2007 100 0 0 chr17 2829810 2830081 -82608399 - AluSx SINE Alu -8 304 34 553 175 133 33 chr17 2830365 2830485 -82607995 + FLAM_A SINE Alu 1 132 -1 2079 85 14 11 chr17 2830492 2830810 -82607670 + AluSg SINE Alu 1 319 0 2097 123 0 0 chr17 2831007 2831300 -82607180 + AluSx SINE Alu 1 293 -19 22 0 0 0 chr17 2831300 2831322 -82607158 + AT_rich Low_complexity Low_complexity 1 22 0 2064 137 7 0 chr17 2831508 2831814 -82606666 + AluSx SINE Alu 1 308 -4 1093 104 0 31 chr17 2832230 2832252 -82606228 - AluSg/x SINE Alu -8 304 283 2287 83 6 6 chr17 2832252 2832564 -82605916 - AluSx SINE Alu 0 312 1 201 39 0 0 chr17 2832567 2832593 -82605887 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1093 104 0 31 chr17 2832593 2832729 -82605751 - AluSg/x SINE Alu -31 281 147 768 333 91 52 chr17 2833412 2833537 -82604943 + L1M4 LINE L1 4156 4275 -1871 2191 71 14 10 chr17 2833537 2833831 -82604649 + AluSx SINE Alu 1 295 -17 768 333 91 52 chr17 2833831 2833958 -82604522 + L1M4 LINE L1 4275 4396 -1750 1572 171 34 13 chr17 2833958 2834256 -82604224 + AluJo SINE Alu 1 304 -8 768 333 91 52 chr17 2834256 2834346 -82604134 + L1M4 LINE L1 4396 4481 -1665 2308 103 3 0 chr17 2834346 2834657 -82603823 + AluSp SINE Alu 2 313 0 768 333 91 52 chr17 2834657 2834815 -82603665 + L1M4 LINE L1 4481 4631 -1515 2331 72 0 0 chr17 2834815 2835106 -82603374 - AluY SINE Alu -20 291 1 2402 77 0 0 chr17 2835108 2835405 -82603075 - AluSc SINE Alu -12 297 1 768 333 91 52 chr17 2835405 2835480 -82603000 + L1M4 LINE L1 4631 4760 -1386 1397 178 15 41 chr17 2836464 2836754 -82601726 + AluJo SINE Alu 15 278 -34 2111 85 0 51 chr17 2836754 2837070 -82601410 + AluSg SINE Alu 1 300 -10 268 320 13 0 chr17 2838518 2838593 -82599887 + L3 LINE CR1 1481 1556 -21 474 310 58 65 chr17 2839025 2839286 -82599194 + MLT1L LTR MaLR 136 394 -221 2134 117 0 13 chr17 2839824 2840140 -82598340 + AluSx SINE Alu 1 312 0 1949 116 7 3 chr17 2840590 2840901 -82597579 - AluSx SINE Alu 0 312 1 2204 103 0 3 chr17 2841455 2841756 -82596724 - AluSx SINE Alu -12 300 1 1972 145 0 0 chr17 2841812 2842102 -82596378 - AluJb SINE Alu -22 290 1 2005 135 0 19 chr17 2842134 2842445 -82596035 - AluJo SINE Alu -3 309 5 225 265 0 0 chr17 2842585 2842634 -82595846 - L2 LINE L2 -243 3070 3022 1015 106 0 0 chr17 2842635 2842767 -82595713 + AluSq/x SINE Alu 1 132 -181 2128 62 47 0 chr17 2842769 2843065 -82595415 + AluSp SINE Alu 1 309 0 2436 65 3 0 chr17 2843071 2843379 -82595101 + AluSx SINE Alu 1 309 -3 993 298 51 72 chr17 2843397 2844149 -82594331 - L2 LINE L2 -312 3001 2266 853 102 0 8 chr17 2847418 2847536 -82590944 + FLAM_A SINE Alu 1 117 -16 2127 90 0 29 chr17 2847590 2847901 -82590579 - AluSg SINE Alu -8 302 1 2451 65 0 0 chr17 2848262 2848570 -82589910 - AluY SINE Alu -3 308 1 861 226 6 0 chr17 2849076 2849235 -82589245 - AluJb SINE Alu -13 299 140 2325 94 3 0 chr17 2849240 2849548 -82588932 - AluSx SINE Alu -3 309 1 2172 98 0 25 chr17 2849625 2849941 -82588539 + AluSx SINE Alu 1 308 -4 2053 96 0 0 chr17 2850499 2850770 -82587710 - AluSx SINE Alu -41 271 1 1437 109 28 0 chr17 2850771 2850982 -82587498 - L1PA10 LINE L1 -13 6155 5939 2162 75 4 0 chr17 2851049 2851380 -82587100 + AluSg1 SINE Alu 1 332 0 871 187 79 30 chr17 2851455 2851658 -82586822 - MER20 DNA MER1_type -1 218 6 2490 77 0 0 chr17 2852238 2852548 -82585932 - AluSx SINE Alu -2 310 1 2188 108 0 10 chr17 2852697 2853003 -82585477 + AluSx SINE Alu 1 303 -9 257 304 104 112 chr17 2853446 2853706 -82584774 - L2 LINE L2 -8 3264 3007 572 187 18 160 chr17 2853770 2853879 -82584601 - MER105 DNA DNA -13 191 68 2236 103 3 3 chr17 2853879 2854191 -82584289 - AluSq SINE Alu -1 312 1 572 187 18 160 chr17 2854191 2854222 -82584258 - MER105 DNA DNA -136 68 34 2112 193 159 48 chr17 2854222 2854321 -82584159 - LTR65 LTR ERV1 0 669 582 2160 86 4 0 chr17 2854321 2854623 -82583857 - AluSx SINE Alu 0 307 5 2112 193 159 48 chr17 2854623 2854972 -82583508 - LTR65 LTR ERV1 -87 582 134 2410 59 0 10 chr17 2854972 2855279 -82583201 - AluY SINE Alu -7 304 1 2112 193 159 48 chr17 2855279 2855430 -82583050 - LTR65 LTR ERV1 -535 134 1 572 187 18 160 chr17 2855430 2855507 -82582973 - MER105 DNA DNA -170 34 4 1492 123 11 84 chr17 2855929 2856069 -82582411 - AluJb SINE Alu -49 263 153 2360 76 3 0 chr17 2856069 2856373 -82582107 - AluSp SINE Alu -8 305 1 1492 123 11 84 chr17 2856373 2856516 -82581964 - AluJb SINE Alu -159 153 1 460 248 142 0 chr17 2856648 2856789 -82581691 - MIR SINE MIR -1 261 101 2021 101 4 0 chr17 2856789 2857067 -82581413 + AluSx SINE Alu 22 300 -12 1046 127 7 0 chr17 2857067 2857240 -82581240 + AluSq SINE Alu 134 307 0 270 333 51 0 chr17 2857581 2857698 -82580782 + L3 LINE CR1 1308 1430 -147 392 21 0 0 chr17 2857699 2857747 -82580733 - AluY SINE Alu -254 48 1 206 305 107 98 chr17 2857809 2857918 -82580562 - L2 LINE L2 -636 2678 2572 2176 117 3 0 chr17 2857918 2858227 -82580253 + AluSx SINE Alu 1 310 -2 206 305 107 98 chr17 2858227 2858537 -82579943 - L2 LINE L2 -742 2572 2255 2096 84 0 0 chr17 2859100 2859375 -82579105 - AluSg SINE Alu -35 275 1 843 246 72 0 chr17 2859448 2859643 -82578837 + MER3 DNA MER1_type 1 209 0 664 277 179 14 chr17 2859798 2860338 -82578142 + L2 LINE L2 2667 3313 0 2159 117 3 0 chr17 2861273 2861582 -82576898 - AluSx SINE Alu -2 310 1 2495 29 3 32 chr17 2861977 2862292 -82576188 - AluY SINE Alu -5 306 1 2251 148 41 35 chr17 2862595 2862700 -82575780 + L1MC4 LINE L1 7378 7481 -561 2239 97 3 0 chr17 2862700 2862998 -82575482 + AluSq SINE Alu 1 299 -14 2251 148 41 35 chr17 2862998 2863353 -82575127 + L1MC4 LINE L1 7481 7841 -201 1236 121 0 0 chr17 2863361 2863534 -82574946 - AluSg/x SINE Alu -14 298 126 2092 109 0 34 chr17 2863534 2863856 -82574624 - AluSx SINE Alu -1 311 1 193 264 58 58 chr17 2864230 2864317 -82574163 + MIR3 SINE MIR 107 193 -15 2492 74 0 0 chr17 2864596 2864907 -82573573 - AluSx SINE Alu -1 311 1 803 222 0 30 chr17 2864909 2865076 -82573404 - FRAM SINE Alu 0 166 5 2182 103 6 13 chr17 2865342 2865653 -82572827 - AluSx SINE Alu -3 309 1 2192 102 0 0 chr17 2866243 2866546 -82571934 - AluSq SINE Alu -10 303 1 210 330 52 0 chr17 2867188 2867303 -82571177 - MIR3 SINE MIR -7 201 81 2262 83 6 10 chr17 2867350 2867662 -82570818 - AluY SINE Alu 0 311 1 1143 38 0 0 chr17 2867664 2867795 -82570685 - AluY SINE Alu -180 131 1 2218 70 27 10 chr17 2868214 2868513 -82569967 - AluY SINE Alu -7 304 1 978 267 180 46 chr17 2869026 2869209 -82569271 - L2 LINE L2 -1 3312 3155 2119 94 3 3 chr17 2869209 2869508 -82568972 + AluSx SINE Alu 1 299 -13 978 267 180 46 chr17 2869508 2870157 -82568323 - L2 LINE L2 -158 3155 2311 2409 50 7 0 chr17 2870157 2870455 -82568025 - AluY SINE Alu -10 301 2 978 267 180 46 chr17 2870455 2870614 -82567866 - L2 LINE L2 -1002 2311 2175 2214 112 0 0 chr17 2870640 2870944 -82567536 + AluSg SINE Alu 1 304 -6 543 307 146 0 chr17 2870963 2871155 -82567325 - MIR SINE MIR -35 227 8 192 284 69 35 chr17 2871514 2871630 -82566850 - L2 LINE L2 -210 3062 2943 389 278 26 57 chr17 2873148 2873327 -82565153 + MIR SINE MIR 14 192 -61 2062 126 17 0 chr17 2873378 2873672 -82564808 + AluSx SINE Alu 1 299 -13 2137 111 7 0 chr17 2873673 2873979 -82564501 + AluSp SINE Alu 2 309 -4 195 231 102 37 chr17 2874560 2874668 -82563812 + MIR3 SINE MIR 40 154 -54 1743 117 53 0 chr17 2875169 2875457 -82563023 - AluSx SINE Alu 0 307 6 303 187 0 133 chr17 2875754 2875957 -82562523 + C-rich Low_complexity Low_complexity 4 179 0 565 113 0 0 chr17 2876507 2876587 -82561893 + AluSg/x SINE Alu 217 296 -14 264 211 253 0 chr17 2876919 2877014 -82561466 + MIR SINE MIR 21 139 -69 223 359 18 41 chr17 2877074 2877129 -82561351 - MIR3 SINE MIR -2 206 151 1749 152 13 32 chr17 2877129 2877306 -82561174 - AluSx SINE Alu -2 310 140 2099 118 0 10 chr17 2877306 2877610 -82560870 - AluSx SINE Alu -11 301 1 1749 152 13 32 chr17 2877610 2877748 -82560732 - AluSx SINE Alu -172 140 1 223 359 18 41 chr17 2877748 2877862 -82560618 - MIR3 SINE MIR -57 151 41 307 226 65 123 chr17 2878076 2878385 -82560095 + L2 LINE L2 2747 3052 -220 201 258 72 41 chr17 2878881 2878978 -82559502 - MIR SINE MIR -87 121 22 556 232 14 162 chr17 2879043 2879149 -82559331 - MIR SINE MIR 0 262 142 1105 148 0 0 chr17 2879149 2879311 -82559169 - FRAM SINE Alu 0 166 5 556 232 14 162 chr17 2879311 2879343 -82559137 - MIR SINE MIR -120 142 107 2115 112 3 16 chr17 2879343 2879657 -82558823 - AluSx SINE Alu -2 310 1 556 232 14 162 chr17 2879657 2879749 -82558731 - MIR SINE MIR -155 107 78 2452 62 3 0 chr17 2879749 2880053 -82558427 + AluY SINE Alu 1 305 -6 556 232 14 162 chr17 2880053 2880104 -82558376 - MIR SINE MIR -184 78 21 567 254 125 19 chr17 2880693 2881048 -82557432 + MLT1H1 LTR MaLR 86 547 -8 2171 117 3 3 chr17 2881335 2881644 -82556836 - AluSx SINE Alu -3 309 1 266 208 20 89 chr17 2881707 2881808 -82556672 + MIR3 SINE MIR 81 174 -34 336 111 0 0 chr17 2881922 2881976 -82556504 + (TCC)n Simple_repeat Simple_repeat 1 54 0 2387 68 3 10 chr17 2883494 2883802 -82554678 - AluY SINE Alu -4 307 2 1993 134 7 0 chr17 2883806 2884097 -82554383 - AluSx SINE Alu -19 293 1 288 0 0 0 chr17 2884211 2884243 -82554237 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 236 310 0 0 chr17 2884249 2884307 -82554173 - L2 LINE L2 -19 3294 3237 2147 92 0 0 chr17 2885319 2885622 -82552858 + AluSx SINE Alu 1 303 0 195 281 24 85 chr17 2885753 2885835 -82552645 + L3 LINE CR1 1377 1453 -124 2557 43 0 0 chr17 2885972 2886275 -82552205 + AluY SINE Alu 1 303 -8 482 288 179 11 chr17 2886455 2886823 -82551657 + L2 LINE L2 1818 2247 -1067 1256 119 0 21 chr17 2886825 2887019 -82551461 + MLT1D LTR MaLR 1 190 -315 1195 45 0 0 chr17 2887028 2887182 -82551298 + GSAT Satellite centromeric 32 185 -32 385 150 0 0 chr17 2887177 2887237 -82551243 + MLT1D LTR MaLR 154 213 -292 * 1240 130 0 0 chr17 3087244 3087429 -82351051 - AluSq SINE Alu -128 185 1 354 293 8 0 chr17 3087467 3087600 -82350880 - L1M4 LINE L1 -3594 2552 2419 2185 94 3 10 chr17 3087963 3088271 -82350209 + AluSx SINE Alu 1 306 -6 1804 111 36 33 chr17 3088751 3089057 -82349423 + AluSx SINE Alu 5 311 -1 1684 155 0 20 chr17 3089407 3089704 -82348776 + AluJb SINE Alu 13 303 -9 765 81 0 10 chr17 3089706 3089805 -82348675 + AluSp SINE Alu 38 135 -178 2142 65 0 77 chr17 3089805 3089942 -82348538 + AluSp SINE Alu 1 147 -166 2209 79 26 3 chr17 3089942 3090245 -82348235 + AluY SINE Alu 1 310 -1 2142 65 0 77 chr17 3090245 3090431 -82348049 + AluSp SINE Alu 147 299 -14 234 322 44 22 chr17 3090494 3090584 -82347896 + L1MC/D LINE L1 5498 5589 -2219 442 246 34 114 chr17 3090599 3090778 -82347702 - L1MC5 LINE L1 -37 7924 7767 1984 116 0 28 chr17 3090778 3091097 -82347383 + AluSx SINE Alu 2 311 -1 442 246 34 114 chr17 3091097 3091153 -82347327 - L1MC5 LINE L1 -194 7767 7708 906 219 45 20 chr17 3091170 3091416 -82347064 - L1ME2 LINE L1 -10 6154 5903 561 346 29 8 chr17 3091426 3091669 -82346811 - L1MEc LINE L1 -6098 298 51 381 193 67 44 chr17 3091672 3091807 -82346673 + L1MC4 LINE L1 6972 7109 -933 1931 117 0 47 chr17 3091839 3092156 -82346324 - AluSx SINE Alu -10 302 1 710 213 36 38 chr17 3092163 3092394 -82346086 - L1ME2 LINE L1 -310 5854 5648 190 265 41 0 chr17 3092405 3092454 -82346026 - L2 LINE L2 -74 3198 3148 181 237 0 0 chr17 3092692 3092730 -82345750 + MIR SINE MIR 117 154 -108 2440 40 0 7 chr17 3093198 3093502 -82344978 + AluY SINE Alu 1 302 -9 269 129 71 14 chr17 3093528 3093598 -82344882 - L1ME4a LINE L1 -1 6120 6047 1432 151 12 15 chr17 3093601 3093860 -82344620 + AluJb SINE Alu 1 258 -54 439 282 59 86 chr17 3093898 3094104 -82344376 + MIR SINE MIR 9 208 -54 2461 63 0 0 chr17 3094104 3094406 -82344074 + AluSx SINE Alu 2 303 -9 439 282 59 86 chr17 3094406 3094454 -82344026 + MIR SINE MIR 208 256 -6 411 309 117 19 chr17 3094464 3094692 -82343788 + L1ME LINE L1 5440 5719 -443 2078 98 0 35 chr17 3094692 3095008 -82343472 + AluSx SINE Alu 2 306 -6 411 309 117 19 chr17 3095008 3095112 -82343368 + L1ME LINE L1 5719 5811 -351 1473 163 6 68 chr17 3095228 3095553 -82342927 + AluJb SINE Alu 5 309 -3 2145 103 0 25 chr17 3095685 3096005 -82342475 - AluSx SINE Alu 0 312 1 3597 206 32 43 chr17 3096537 3096998 -82341482 + MER21B LTR ERV1 13 463 -400 2072 92 24 3 chr17 3096998 3097290 -82341190 - AluSg SINE Alu -12 298 1 3597 206 32 43 chr17 3097290 3097639 -82340841 + MER21B LTR ERV1 463 814 -49 2254 81 7 0 chr17 3097737 3098032 -82340448 + AluSx SINE Alu 2 298 -14 261 0 0 0 chr17 3098072 3098101 -82340379 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 313 298 98 74 chr17 3098106 3098485 -82339995 - L2 LINE L2 -36 3236 2849 2313 77 13 10 chr17 3098663 3098973 -82339507 + AluSq SINE Alu 1 311 -2 839 256 98 94 chr17 3098973 3099492 -82338988 - L1ME3A LINE L1 -41 6129 5609 2221 102 0 31 chr17 3100070 3100392 -82338088 + AluSx SINE Alu 1 312 0 2064 114 0 29 chr17 3100507 3100822 -82337658 + AluSx SINE Alu 1 306 -6 243 260 50 70 chr17 3101023 3101123 -82337357 - MER91C DNA MER1_type -39 101 4 543 303 162 6 chr17 3101611 3101925 -82336555 - L2 LINE L2 -6 3307 2945 1702 154 0 8 chr17 3102107 3102373 -82336107 + AluJb SINE Alu 29 292 -20 775 176 155 10 chr17 3102441 3102624 -82335856 - MLT1D LTR MaLR -69 436 245 1261 183 48 8 chr17 3102627 3102878 -82335602 + AluJb SINE Alu 35 295 -17 1041 96 0 0 chr17 3102974 3103109 -82335371 + AluSq/x SINE Alu 1 135 -178 2241 104 0 3 chr17 3103109 3103418 -82335062 + AluSq SINE Alu 1 308 -5 530 273 23 11 chr17 3103418 3103594 -82334886 - L2 LINE L2 -782 2532 2355 1330 180 127 43 chr17 3103594 3103658 -82334822 - MLT1D LTR MaLR -2 503 446 410 0 0 20 chr17 3103658 3103709 -82334771 + (TTA)n Simple_repeat Simple_repeat 2 51 0 1886 107 0 21 chr17 3103713 3103993 -82334487 - AluSq SINE Alu -39 274 1 1330 180 127 43 chr17 3103993 3104246 -82334234 - MLT1D LTR MaLR -61 444 154 1135 45 0 13 chr17 3104241 3104397 -82334083 - GSAT Satellite centromeric -32 185 32 * 1256 119 0 21 chr17 3104406 3104600 -82333880 - MLT1D LTR MaLR -315 190 1 452 292 176 14 chr17 3104602 3104972 -82333508 - L2 LINE L2 -1067 2247 1818 2530 43 0 3 chr17 3105152 3105457 -82333023 - AluY SINE Alu -7 304 1 207 272 25 86 chr17 3105596 3105677 -82332803 - L3 LINE CR1 -125 1452 1377 1982 91 0 17 chr17 3105809 3106117 -82332363 - AluSx SINE Alu 0 303 1 236 310 0 0 chr17 3107132 3107190 -82331290 + L2 LINE L2 3237 3294 -19 360 0 0 0 chr17 3107196 3107236 -82331244 + (TGAA)n Simple_repeat Simple_repeat 1 40 0 1907 133 7 10 chr17 3107350 3107644 -82330836 + AluSx SINE Alu 1 293 -19 2387 68 3 10 chr17 3107648 3107956 -82330524 + AluY SINE Alu 2 307 -4 286 127 0 18 chr17 3109484 3109539 -82328941 + (GGA)n Simple_repeat Simple_repeat 1 54 0 266 208 20 89 chr17 3109654 3109755 -82328725 - MIR3 SINE MIR -34 174 81 1908 120 0 43 chr17 3109818 3110144 -82328336 + AluSx SINE Alu 1 312 0 567 256 123 22 chr17 3110431 3110787 -82327693 - MLT1H1 LTR MaLR -8 547 86 521 227 14 168 chr17 3111377 3111428 -82327052 + MIR SINE MIR 21 78 -184 2512 62 0 0 chr17 3111428 3111734 -82326746 - AluY SINE Alu -5 306 1 521 227 14 168 chr17 3111734 3111826 -82326654 + MIR SINE MIR 78 182 -80 2052 114 3 19 chr17 3111826 3112141 -82326339 + AluSx SINE Alu 1 310 -2 521 227 14 168 chr17 3112141 3112173 -82326307 + MIR SINE MIR 182 217 -45 1076 147 0 6 chr17 3112173 3112336 -82326144 + FRAM SINE Alu 5 166 0 521 227 14 168 chr17 3112336 3112444 -82326036 + MIR SINE MIR 217 262 0 304 226 65 126 chr17 3113105 3113415 -82325065 - L2 LINE L2 -220 3052 2747 210 355 24 41 chr17 3113629 3113743 -82324737 + MIR3 SINE MIR 41 153 -55 1599 156 9 70 chr17 3113743 3113895 -82324585 + AluSx SINE Alu 1 124 -188 1798 126 0 48 chr17 3113895 3114205 -82324275 + AluSx SINE Alu 7 301 -11 1599 156 9 70 chr17 3114205 3114380 -82324100 + AluSx SINE Alu 124 308 -4 210 355 24 41 chr17 3114380 3114434 -82324046 + MIR3 SINE MIR 153 206 -2 237 208 250 10 chr17 3114494 3114590 -82323890 - MIR SINE MIR -69 139 21 585 100 0 0 chr17 3114924 3115004 -82323476 - AluSg/x SINE Alu -14 296 217 303 187 0 133 chr17 3115573 3115776 -82322704 + G-rich Low_complexity Low_complexity 4 179 0 1718 117 53 4 chr17 3116070 3116359 -82322121 + AluSx SINE Alu 6 307 0 2102 111 7 3 chr17 3117556 3117863 -82320617 - AluSp SINE Alu -4 309 2 2030 125 17 3 chr17 3117864 3118159 -82320321 - AluSx SINE Alu -13 299 1 389 278 26 57 chr17 3118210 3118389 -82320091 - MIR SINE MIR -61 147 14 503 299 144 10 chr17 3120386 3120580 -82317900 + MIR SINE MIR 8 227 -35 2134 119 3 10 chr17 3120599 3120909 -82317571 - AluSq SINE Alu -5 308 1 977 272 176 50 chr17 3120935 3121094 -82317386 + L2 LINE L2 2175 2313 -1000 2350 47 7 7 chr17 3121094 3121394 -82317086 + AluY SINE Alu 2 301 -10 977 272 176 50 chr17 3121394 3122053 -82316427 + L2 LINE L2 2313 3153 -160 2073 97 3 7 chr17 3122053 3122353 -82316127 - AluSx SINE Alu -13 299 1 977 272 176 50 chr17 3122353 3122536 -82315944 + L2 LINE L2 3153 3312 -1 2194 67 27 13 chr17 3123050 3123350 -82315130 + AluY SINE Alu 1 304 -7 1143 38 0 0 chr17 3123770 3123901 -82314579 + AluY SINE Alu 1 131 -180 2260 83 6 10 chr17 3123903 3124215 -82314265 + AluY SINE Alu 1 311 0 210 330 52 0 chr17 3124262 3124377 -82314103 + MIR3 SINE MIR 81 201 -7 2131 108 0 3 chr17 3125019 3125324 -82313156 + AluSq SINE Alu 1 304 -9 2182 103 6 13 chr17 3125921 3126232 -82312248 + AluSx SINE Alu 1 309 -3 803 222 0 30 chr17 3126498 3126665 -82311815 + FRAM SINE Alu 5 166 0 2492 74 0 0 chr17 3126667 3126978 -82311502 + AluSx SINE Alu 1 311 -1 193 264 58 58 chr17 3127257 3127344 -82311136 - MIR3 SINE MIR -15 193 107 2075 112 0 37 chr17 3127721 3128044 -82310436 + AluSx SINE Alu 1 311 -1 1191 126 0 6 chr17 3128044 3128218 -82310262 + AluSg/x SINE Alu 126 298 -14 2251 148 41 35 chr17 3128226 3128581 -82309899 - L1MC4 LINE L1 -201 7841 7481 2282 97 0 0 chr17 3128581 3128880 -82309600 - AluSq SINE Alu -14 299 1 2251 148 41 35 chr17 3128880 3128985 -82309495 - L1MC4 LINE L1 -561 7481 7378 2513 32 0 32 chr17 3129288 3129604 -82308876 + AluY SINE Alu 1 306 -5 1980 114 3 19 chr17 3129999 3130314 -82308166 + AluSx SINE Alu 1 310 -2 664 277 179 14 chr17 3131254 3131794 -82306686 - L2 LINE L2 0 3313 2667 694 249 69 11 chr17 3131951 3132140 -82306340 - MER3 DNA MER1_type 0 209 10 2096 84 0 0 chr17 3132229 3132504 -82305976 + AluSg SINE Alu 1 275 -35 216 301 107 102 chr17 3133068 3133380 -82305100 + L2 LINE L2 2255 2571 -743 2141 116 3 3 chr17 3133380 3133690 -82304790 - AluSx SINE Alu -2 310 1 216 301 107 102 chr17 3133690 3133799 -82304681 + L2 LINE L2 2571 2678 -636 362 20 0 20 chr17 3133861 3133910 -82304570 + AluY SINE Alu 1 48 -254 241 311 50 17 chr17 3133911 3134030 -82304450 - L3 LINE CR1 -147 1430 1308 1045 127 7 0 chr17 3134372 3134545 -82303935 - AluSq SINE Alu 0 307 134 2021 101 4 0 chr17 3134545 3134823 -82303657 - AluSx SINE Alu -12 300 22 433 246 141 7 chr17 3134823 3134965 -82303515 + MIR SINE MIR 101 261 -1 1492 123 11 84 chr17 3135097 3135240 -82303240 + AluJb SINE Alu 1 114 -198 2338 75 3 3 chr17 3135240 3135545 -82302935 + AluSp SINE Alu 1 305 -8 1492 123 11 84 chr17 3135545 3135685 -82302795 + AluJb SINE Alu 114 263 -49 283 219 55 0 chr17 3136109 3136182 -82302298 + MER105 DNA DNA 4 80 -124 1852 190 153 77 chr17 3136186 3136338 -82302142 + LTR65 LTR ERV1 1 140 -529 2268 61 0 19 chr17 3136338 3136648 -82301832 + AluY SINE Alu 1 304 -7 1852 190 153 77 chr17 3136648 3137014 -82301466 + LTR65 LTR ERV1 140 577 -92 2161 86 4 0 chr17 3137014 3137293 -82301187 + AluSx SINE Alu 5 307 0 208 0 0 0 chr17 3137293 3137316 -82301164 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1852 190 153 77 chr17 3137316 3137415 -82301065 + LTR65 LTR ERV1 577 667 -2 2198 116 0 3 chr17 3137449 3137759 -82300721 + AluSx SINE Alu 1 309 -3 875 191 73 29 chr17 3138328 3138532 -82299948 + MER20 DNA MER1_type 6 218 -1 1404 96 5 0 chr17 3138607 3138805 -82299675 - AluSg/x SINE Alu -7 302 104 1045 127 7 0 chr17 3139035 3139208 -82299272 - AluSq SINE Alu 0 307 134 1918 111 4 4 chr17 3139208 3139487 -82298993 - AluSx SINE Alu -12 300 22 460 248 142 0 chr17 3139487 3139628 -82298852 + MIR SINE MIR 101 261 -1 1492 123 11 84 chr17 3139760 3139903 -82298577 + AluJb SINE Alu 1 114 -198 2290 80 10 0 chr17 3139903 3140205 -82298275 + AluSp SINE Alu 1 305 -8 1492 123 11 84 chr17 3140205 3140345 -82298135 + AluJb SINE Alu 114 263 -49 572 187 18 160 chr17 3140767 3140844 -82297636 + MER105 DNA DNA 4 90 -114 2104 193 159 48 chr17 3140844 3140995 -82297485 + LTR65 LTR ERV1 1 134 -535 2402 62 0 7 chr17 3140995 3141301 -82297179 + AluY SINE Alu 1 304 -7 2104 193 159 48 chr17 3141301 3141650 -82296830 + LTR65 LTR ERV1 134 582 -87 2148 86 4 0 chr17 3141650 3141952 -82296528 + AluSx SINE Alu 5 307 0 2104 193 159 48 chr17 3141952 3142051 -82296429 + LTR65 LTR ERV1 582 669 0 572 187 18 160 chr17 3142051 3142082 -82296398 + MER105 DNA DNA 90 124 -80 2222 106 3 3 chr17 3142082 3142394 -82296086 + AluSq SINE Alu 1 312 -1 572 187 18 160 chr17 3142394 3142503 -82295977 + MER105 DNA DNA 124 191 -13 257 304 104 112 chr17 3142567 3142827 -82295653 + L2 LINE L2 3007 3264 -8 2076 108 0 11 chr17 3143268 3143583 -82294897 - AluSx SINE Alu 0 312 1 1995 100 0 4 chr17 3143749 3144019 -82294461 + AluSx SINE Alu 3 271 -41 2064 100 0 29 chr17 3144712 3145021 -82293459 - AluSx SINE Alu -12 300 1 2273 95 3 3 chr17 3145098 3145404 -82293076 + AluSx SINE Alu 1 306 -6 702 223 0 42 chr17 3145409 3145575 -82292905 + AluJb SINE Alu 140 298 -14 2366 68 0 10 chr17 3146084 3146395 -82292085 + AluY SINE Alu 1 308 -3 2115 96 0 22 chr17 3146759 3147071 -82291409 + AluSg SINE Alu 1 305 -5 825 101 0 17 chr17 3147125 3147244 -82291236 - FLAM_A SINE Alu -16 117 1 993 298 51 72 chr17 3150522 3151274 -82287206 + L2 LINE L2 2266 3001 -312 2447 65 0 3 chr17 3151292 3151602 -82286878 - AluSx SINE Alu -3 309 1 2003 65 47 14 chr17 3151608 3151908 -82286572 - AluSp SINE Alu 0 309 1 1015 106 0 0 chr17 3151910 3152042 -82286438 - AluSq/x SINE Alu -180 132 1 225 265 0 0 chr17 3152043 3152092 -82286388 + L2 LINE L2 3022 3070 -243 2004 137 0 19 chr17 3152232 3152545 -82285935 + AluJo SINE Alu 5 311 -1 1972 145 0 0 chr17 3152577 3152867 -82285613 + AluJb SINE Alu 1 290 -22 2213 103 0 3 chr17 3152924 3153226 -82285254 + AluSx SINE Alu 1 301 -11 1915 116 7 7 chr17 3153781 3154093 -82284387 + AluSx SINE Alu 1 312 0 2067 123 0 16 chr17 3154545 3154862 -82283618 - AluSx SINE Alu 0 312 1 474 310 58 65 chr17 3155400 3155661 -82282819 - MLT1L LTR MaLR -221 394 136 268 320 13 0 chr17 3156094 3156169 -82282311 - L3 LINE CR1 -21 1556 1481 2037 91 0 53 chr17 3157622 3157940 -82280540 - AluSg SINE Alu -9 301 1 1333 181 15 37 chr17 3157960 3158230 -82280250 - AluJo SINE Alu -34 278 15 741 319 94 58 chr17 3159215 3159290 -82279190 - L1M4 LINE L1 -1386 4760 4689 2366 81 0 0 chr17 3159290 3159587 -82278893 + AluSc SINE Alu 1 297 -12 2240 73 7 0 chr17 3159589 3159877 -82278603 + AluY SINE Alu 1 290 -21 741 319 94 58 chr17 3159877 3160037 -82278443 - L1M4 LINE L1 -1457 4689 4536 2375 87 3 0 chr17 3160037 3160347 -82278133 - AluSp SINE Alu -1 312 2 741 319 94 58 chr17 3160347 3160437 -82278043 - L1M4 LINE L1 -1610 4536 4451 1429 176 33 23 chr17 3160437 3160738 -82277742 - AluJo SINE Alu -8 304 1 741 319 94 58 chr17 3160738 3160864 -82277616 - L1M4 LINE L1 -1695 4451 4331 1975 88 14 20 chr17 3160864 3161161 -82277319 - AluSx SINE Alu -17 295 1 741 319 94 58 chr17 3161161 3161287 -82277193 - L1M4 LINE L1 -1815 4331 4156 994 116 0 0 chr17 3161978 3162142 -82276338 + AluSg/x SINE Alu 145 308 0 2185 85 3 29 chr17 3162155 3162471 -82276009 + AluSx SINE Alu 5 312 0 1964 133 7 10 chr17 3162898 3163207 -82275273 - AluSx SINE Alu -4 308 1 2017 121 0 0 chr17 3163396 3163709 -82274771 - AluSx SINE Alu 0 313 1 2051 85 14 11 chr17 3163907 3164225 -82274255 - AluSg SINE Alu 0 319 1 546 175 133 33 chr17 3164232 3164352 -82274128 - FLAM_A SINE Alu -1 132 1 1966 103 0 0 chr17 3164636 3164907 -82273573 + AluSx SINE Alu 34 304 -8 228 296 0 0 chr17 3165209 3165263 -82273217 - L1ME LINE L1 -539 5582 5529 1251 53 0 0 chr17 3165775 3165927 -82272553 - AluYa5 SINE Alu -8 303 152 1135 101 0 0 chr17 3166027 3166176 -82272304 - AluSg SINE Alu -161 149 1 1727 155 28 17 chr17 3166581 3166872 -82271608 + AluJb SINE Alu 5 298 -14 250 322 106 28 chr17 3167235 3167415 -82271065 + MIR SINE MIR 5 198 -64 353 332 89 52 chr17 3168242 3168567 -82269913 + HAL1b LINE L1 901 1237 -111 1744 169 0 32 chr17 3168602 3168916 -82269564 + AluJb SINE Alu 1 304 -8 346 277 104 13 chr17 3168954 3169185 -82269295 + L1M4 LINE L1 5140 5391 -755 1294 97 0 6 chr17 3169215 3169391 -82269089 + AluSq SINE Alu 3 177 -136 256 83 0 42 chr17 3169491 3169539 -82268941 + Alu SINE Alu 247 292 -8 234 313 115 0 chr17 3170225 3170321 -82268159 - MIR3 SINE MIR -11 197 91 2279 50 9 41 chr17 3170379 3170698 -82267782 + AluY SINE Alu 3 311 0 661 338 80 15 chr17 3171038 3171375 -82267105 + L2 LINE L2 2914 3272 0 517 256 46 65 chr17 3171573 3171692 -82266788 - L1M4 LINE L1 -2687 3459 3339 2515 36 0 0 chr17 3171692 3171993 -82266487 - AluY SINE Alu -10 301 1 517 256 46 65 chr17 3171993 3172322 -82266158 - L1M4 LINE L1 -2807 3339 3005 803 39 10 0 chr17 3172322 3172425 -82266055 + (TTCC)n Simple_repeat Simple_repeat 1 104 0 1877 128 4 0 chr17 3172427 3172701 -82265779 - AluSx SINE Alu -37 275 1 1589 178 0 61 chr17 3172706 3173032 -82265448 - AluJb SINE Alu 0 312 7 517 256 46 65 chr17 3173032 3173198 -82265282 - L1M4 LINE L1 -3146 3000 2675 2368 69 0 0 chr17 3173199 3173490 -82264990 + AluSc SINE Alu 5 295 -14 2331 76 10 0 chr17 3173899 3174202 -82264278 - AluSx SINE Alu -6 306 1 1799 131 3 13 chr17 3174596 3174894 -82263586 - AluSq SINE Alu 0 313 19 446 224 33 20 chr17 3174994 3175146 -82263334 + L1M4 LINE L1 2227 2380 -3766 1986 115 30 3 chr17 3175151 3175446 -82263034 - AluSq SINE Alu -9 304 2 217 257 206 37 chr17 3175811 3175947 -82262533 + L2 LINE L2 3112 3270 -2 335 283 52 38 chr17 3175974 3176168 -82262312 + MIR SINE MIR 18 211 -51 239 274 170 22 chr17 3176465 3176600 -82261880 + MIR3 SINE MIR 3 157 -51 2141 95 3 3 chr17 3177974 3178270 -82260210 - AluSx SINE Alu -16 296 1 2216 88 7 3 chr17 3178485 3178781 -82259699 - AluSg SINE Alu -13 297 1 240 237 246 26 chr17 3179563 3179677 -82258803 - MER5A DNA MER1_type 0 189 51 2224 102 0 0 chr17 3179710 3180013 -82258467 + AluSx SINE Alu 1 303 -9 735 266 58 0 chr17 3182061 3182249 -82256231 + MIR SINE MIR 43 241 -21 2259 100 3 0 chr17 3183265 3183574 -82254906 - AluSp SINE Alu -3 310 1 657 209 0 0 chr17 3187139 3187292 -82251188 + (CA)n Simple_repeat Simple_repeat 1 153 0 1936 68 61 46 chr17 3189348 3189651 -82248829 + AluY SINE Alu 1 307 0 414 130 0 0 chr17 3189792 3189861 -82248619 + L1MC4 LINE L1 7475 7543 -499 1652 165 47 0 chr17 3189868 3190165 -82248315 + AluJb SINE Alu 1 311 -1 1807 179 8 66 chr17 3190184 3190762 -82247718 + L1MB5 LINE L1 5099 5651 -533 2054 122 3 6 chr17 3190762 3191073 -82247407 + AluSq SINE Alu 1 310 -3 1807 179 8 66 chr17 3191073 3191131 -82247349 + L1MB5 LINE L1 5651 5711 -473 307 109 31 47 chr17 3191132 3191196 -82247284 - AluSq SINE Alu -1 300 238 1128 144 0 28 chr17 3191196 3191376 -82247104 - AluSq SINE Alu -137 176 2 1139 186 4 30 chr17 3191379 3191615 -82246865 + L1MB5 LINE L1 5730 5959 -215 1438 86 5 10 chr17 3191615 3191813 -82246667 - AluSx SINE Alu -115 197 1 605 213 20 25 chr17 3191855 3192024 -82246456 + MLT1B LTR MaLR 166 342 -36 22 35 0 0 chr17 3193457 3193486 -82244994 + GC_rich Low_complexity Low_complexity 1 29 0 219 69 0 0 chr17 3193569 3193598 -82244882 + (TCC)n Simple_repeat Simple_repeat 1 29 0 2220 60 50 10 chr17 3193748 3194048 -82244432 - AluSx SINE Alu 0 312 1 325 330 54 0 chr17 3194902 3195014 -82243466 - MER5A DNA MER1_type -9 180 63 433 333 128 27 chr17 3195040 3195337 -82243143 + L2 LINE L2 2986 3312 -1 225 241 69 0 chr17 3196177 3196235 -82242245 - MER112 DNA MER1_type -31 229 168 1218 182 0 55 chr17 3196239 3196364 -82242116 + AluJo SINE Alu 1 131 -181 300 27 0 0 chr17 3196364 3196401 -82242079 + (CA)n Simple_repeat Simple_repeat 2 38 0 1218 182 0 55 chr17 3196401 3196421 -82242059 + AluJo SINE Alu 131 151 -161 1784 139 17 10 chr17 3196421 3196709 -82241771 + AluJo SINE Alu 1 290 -22 1218 182 0 55 chr17 3196709 3196815 -82241665 + AluJo SINE Alu 151 239 -73 259 228 145 55 chr17 3196816 3196833 -82241647 - MER112 DNA MER1_type -101 159 145 1982 122 0 0 chr17 3196833 3197293 -82241187 + AluSg SINE Alu 2 461 0 259 228 145 55 chr17 3197293 3197417 -82241063 - MER112 DNA MER1_type -115 145 2 2253 91 0 0 chr17 3197568 3197865 -82240615 + AluSg SINE Alu 1 297 -13 1648 181 24 0 chr17 3197937 3198230 -82240250 + MSTB LTR MaLR 1 300 -126 1309 100 105 9 chr17 3198457 3198667 -82239813 - MER30 DNA MER1_type 0 230 1 2020 69 47 7 chr17 3198732 3199028 -82239452 + AluSp SINE Alu 3 309 0 1792 57 4 0 chr17 3199034 3199262 -82239218 + AluSq SINE Alu 1 229 -84 2137 110 0 25 chr17 3199416 3199734 -82238746 - AluSg SINE Alu 0 310 1 298 247 62 0 chr17 3200018 3200099 -82238381 + L1ME LINE L1 5693 5778 -343 502 155 10 62 chr17 3200559 3200656 -82237824 - FRAM SINE Alu -81 95 4 272 343 72 12 chr17 3200693 3200859 -82237621 + L2 LINE L2 2883 3058 -214 1482 157 52 28 chr17 3200997 3201283 -82237197 - AluJb SINE Alu -17 295 3 2322 77 3 0 chr17 3201334 3201634 -82236846 - AluSp SINE Alu -12 301 1 2001 113 7 20 chr17 3201747 3202049 -82236431 - AluSx SINE Alu -14 298 1 640 257 48 62 chr17 3202242 3202438 -82236042 + MIR SINE MIR 38 231 -31 2167 97 3 19 chr17 3202438 3202747 -82235733 - AluSx SINE Alu -8 304 1 640 257 48 62 chr17 3202747 3202779 -82235701 + MIR SINE MIR 231 262 0 1432 66 11 0 chr17 3205270 3205453 -82233027 - AluSg/x SINE Alu -9 303 119 1902 93 0 76 chr17 3205557 3205859 -82232621 - AluSx SINE Alu -3 309 31 4870 89 136 33 chr17 3205859 3206608 -82231872 + LTR12 LTR ERV1 1 826 0 1517 165 9 71 chr17 3207034 3207356 -82231124 + AluJo SINE Alu 1 302 -10 2320 80 0 13 chr17 3207630 3207943 -82230537 + AluSp SINE Alu 1 309 -4 2137 112 3 3 chr17 3208536 3208840 -82229640 + AluSp SINE Alu 1 304 -9 1681 165 0 26 chr17 3209612 3209772 -82228708 - AluJb SINE Alu -17 295 145 2092 113 3 3 chr17 3209772 3210064 -82228416 - AluSc SINE Alu -17 292 1 1681 165 0 26 chr17 3210064 3210206 -82228274 - AluJb SINE Alu -167 145 1 1775 85 0 0 chr17 3210482 3210717 -82227763 - AluSc SINE Alu -70 239 5 692 236 109 0 chr17 3210717 3210946 -82227534 + Charlie4a DNA MER1_type 159 412 -96 2536 43 0 0 chr17 3211588 3211887 -82226593 + AluY SINE Alu 1 299 -12 180 0 0 0 chr17 3211887 3211907 -82226573 + (TA)n Simple_repeat Simple_repeat 2 21 0 209 330 78 0 chr17 3212118 3212221 -82226259 + MIR SINE MIR 30 140 -68 555 259 0 0 chr17 3212855 3213196 -82225284 + (CA)n Simple_repeat Simple_repeat 1 341 0 249 266 0 0 chr17 3213211 3213305 -82225175 + (CA)n Simple_repeat Simple_repeat 1 94 0 185 268 0 0 chr17 3213583 3213624 -82224856 + L2 LINE L2 3206 3246 -26 325 227 0 23 chr17 3214214 3214302 -82224178 - AluJ/FRAM SINE Alu 0 302 217 * 333 250 24 0 chr17 3214261 3214345 -82224135 + AluY SINE Alu 216 301 0 425 261 15 46 chr17 3214372 3214502 -82223978 + L1MC5 LINE L1 6995 7120 -841 280 109 18 18 chr17 3214514 3214569 -82223911 + (TCCC)n Simple_repeat Simple_repeat 4 58 0 2045 137 0 3 chr17 3214569 3214882 -82223598 - AluSx SINE Alu 0 312 1 262 274 68 41 chr17 3214929 3215075 -82223405 + L1MC4 LINE L1 7100 7249 -793 252 318 103 0 chr17 3215079 3215186 -82223294 + L1MC4 LINE L1 7323 7440 -602 286 286 26 0 chr17 3215191 3215268 -82223212 - MER5A DNA MER1_type -107 82 4 1843 119 3 26 chr17 3215310 3215601 -82222879 + AluSx SINE Alu 1 286 -26 192 40 0 0 chr17 3215601 3215626 -82222854 + (CA)n Simple_repeat Simple_repeat 2 26 0 1843 119 3 26 chr17 3215626 3215637 -82222843 + AluSx SINE Alu 286 296 -16 318 296 77 86 chr17 3215719 3215971 -82222509 + L1MC5 LINE L1 7340 7593 -368 2436 53 0 3 chr17 3215971 3216272 -82222208 + AluY SINE Alu 1 300 -11 318 296 77 86 chr17 3216272 3216386 -82222094 + L1MC5 LINE L1 7593 7704 -257 2165 109 0 0 chr17 3216386 3216680 -82221800 - AluSx SINE Alu -18 294 1 318 296 77 86 chr17 3216680 3216754 -82221726 + L1MC5 LINE L1 7704 7777 -184 466 253 136 6 chr17 3216755 3216917 -82221563 - MER5A DNA MER1_type -3 186 4 2078 94 16 10 chr17 3217209 3217517 -82220963 - AluSx SINE Alu -2 310 1 2066 112 3 7 chr17 3218146 3218451 -82220029 - AluSg SINE Alu -6 304 1 729 172 0 0 chr17 3218451 3218567 -82219913 - AluSg/x SINE Alu -14 296 181 1203 117 11 0 chr17 3218767 3218946 -82219534 - AluY SINE Alu -130 181 1 2334 83 0 3 chr17 3219074 3219376 -82219104 - AluSg SINE Alu -9 301 1 854 120 0 35 chr17 3219377 3219519 -82218961 - AluJo SINE Alu -175 137 1 215 333 23 0 chr17 3219560 3219647 -82218833 + L2 LINE L2 3157 3245 -27 185 268 0 0 chr17 3220554 3220595 -82217885 - L2 LINE L2 -26 3246 3206 249 266 0 0 chr17 3220874 3220968 -82217512 + (TG)n Simple_repeat Simple_repeat 1 94 0 627 253 0 0 chr17 3220983 3221332 -82217148 + (TG)n Simple_repeat Simple_repeat 1 349 0 191 333 88 0 chr17 3221966 3222068 -82216412 - MIR SINE MIR -68 140 30 216 0 0 0 chr17 3222279 3222303 -82216177 + (TA)n Simple_repeat Simple_repeat 2 25 0 2511 47 0 0 chr17 3222303 3222599 -82215881 - AluY SINE Alu -15 296 1 2174 98 0 0 chr17 3222599 3222895 -82215585 - AluSx SINE Alu -16 296 1 231 265 47 47 chr17 3223532 3223702 -82214778 + L2 LINE L2 2868 3037 -235 299 275 75 50 chr17 3224653 3224813 -82213667 + MIR3 SINE MIR 30 193 -15 1817 119 29 4 chr17 3224981 3225284 -82213196 + AluSx SINE Alu 1 310 0 679 232 7 13 chr17 3227196 3227351 -82211129 + MER3 DNA MER1_type 3 156 -53 1328 236 66 43 chr17 3228360 3228873 -82209607 + L1MC4 LINE L1 7516 8040 -2 26 0 0 0 chr17 3228874 3228900 -82209580 + AT_rich Low_complexity Low_complexity 1 26 0 2123 65 3 20 chr17 3228952 3229245 -82209235 + AluY SINE Alu 1 288 -23 487 215 25 66 chr17 3229245 3229366 -82209114 + FLAM_A SINE Alu 11 126 -16 1917 128 7 10 chr17 3229427 3229725 -82208755 + AluSx SINE Alu 1 297 -15 335 296 181 10 chr17 3229895 3230094 -82208386 - MIR SINE MIR -18 244 12 2264 81 10 0 chr17 3230131 3230429 -82208051 - AluSx SINE Alu -11 301 1 580 229 122 12 chr17 3230502 3230705 -82207775 + MLT1A2 LTR MaLR 1 236 -154 324 250 62 39 chr17 3230954 3231105 -82207375 - MIR3 SINE MIR -20 188 33 2284 77 0 3 chr17 3231254 3231551 -82206929 - AluSx SINE Alu -16 296 1 180 0 0 0 chr17 3231891 3231911 -82206569 + (A)n Simple_repeat Simple_repeat 1 20 0 190 288 106 24 chr17 3232700 3232870 -82205610 - L2 LINE L2 0 3313 3130 465 304 37 12 chr17 3232949 3233110 -82205370 - L2 LINE L2 -20 3252 3088 659 117 11 0 chr17 3233919 3234013 -82204467 - FRAM SINE Alu -24 152 58 458 164 31 23 chr17 3234055 3234178 -82204302 + L1MB8 LINE L1 5317 5441 -727 803 128 7 54 chr17 3234178 3234326 -82204154 + FLAM_C SINE Alu 1 141 -2 3121 163 82 43 chr17 3234329 3234600 -82203880 + L1MB8 LINE L1 5428 5687 -491 2083 104 3 10 chr17 3234600 3234909 -82203571 + AluSq SINE Alu 1 307 -6 3121 163 82 43 chr17 3234909 3235359 -82203121 + L1MB8 LINE L1 5687 6177 -1 22 0 0 0 chr17 3237414 3237436 -82201044 + AT_rich Low_complexity Low_complexity 1 22 0 328 129 32 0 chr17 3238926 3238988 -82199492 - AluSq SINE Alu 0 302 239 1189 99 0 12 chr17 3238988 3239150 -82199330 - AluSq SINE Alu -153 160 1 248 319 44 44 chr17 3240465 3240578 -82197902 + L2 LINE L2 2981 3093 -179 259 292 15 0 chr17 3240592 3240657 -82197823 + L2 LINE L2 3245 3310 -3 1226 194 116 47 chr17 3240771 3241091 -82197389 - MER2 DNA MER2_type -2 342 1 2182 60 21 32 chr17 3241958 3242243 -82196237 + AluY SINE Alu 14 295 -16 289 274 89 32 chr17 3242372 3242496 -82195984 + L1ME4a LINE L1 5389 5519 -602 2472 72 3 3 chr17 3242545 3242851 -82195629 + AluY SINE Alu 3 308 -3 367 259 147 45 chr17 3242947 3243159 -82195321 + L1ME4a LINE L1 5718 5974 -147 231 36 0 0 chr17 3243159 3243187 -82195293 + (CA)n Simple_repeat Simple_repeat 1 28 0 367 259 147 45 chr17 3243187 3243287 -82195193 + L1ME4a LINE L1 5974 6062 -59 303 140 0 0 chr17 3243689 3243739 -82194741 + (TCC)n Simple_repeat Simple_repeat 2 51 0 2680 213 79 20 chr17 3244005 3244476 -82194004 - MER82 DNA MER2_type -6 647 131 2463 72 0 10 chr17 3244476 3244783 -82193697 + AluY SINE Alu 1 304 -7 2680 213 79 20 chr17 3244783 3244916 -82193564 - MER82 DNA MER2_type -522 131 7 1808 171 0 33 chr17 3245156 3245460 -82193020 - AluJb SINE Alu -14 298 5 2202 101 3 10 chr17 3245873 3246171 -82192309 + AluSg SINE Alu 1 296 -14 2319 98 0 0 chr17 3246641 3246938 -82191542 - AluSx SINE Alu -5 307 11 2865 199 155 57 chr17 3248066 3248259 -82190221 + L1MC4 LINE L1 6813 6986 -1056 2228 74 3 101 chr17 3248259 3248596 -82189884 + AluSc SINE Alu 1 304 -5 2865 199 155 57 chr17 3248596 3248814 -82189666 + L1MC4 LINE L1 6986 7181 -861 826 162 0 29 chr17 3248814 3248950 -82189530 - FLAM_C SINE Alu -1 132 1 2865 199 155 57 chr17 3248950 3249538 -82188942 + L1MC4 LINE L1 7181 7911 -131 330 132 0 0 chr17 3249553 3249606 -82188874 + (CATA)n Simple_repeat Simple_repeat 2 54 0 317 167 50 0 chr17 3249606 3249666 -82188814 - L1MCa LINE L1 -4358 2068 2006 182 114 0 29 chr17 3249667 3249702 -82188778 + (CATA)n Simple_repeat Simple_repeat 4 37 0 322 227 15 0 chr17 3249702 3249768 -82188712 - L1MCa LINE L1 -4363 2063 1997 218 295 16 0 chr17 3250036 3250097 -82188383 - L3 LINE CR1 -5 1572 1511 22 0 0 0 chr17 3250293 3250315 -82188165 + AT_rich Low_complexity Low_complexity 1 22 0 819 243 128 16 chr17 3250418 3250669 -82187811 + L2 LINE L2 3035 3313 0 1592 177 57 13 chr17 3251592 3251991 -82186489 + AluJo SINE Alu 1 412 0 2153 39 19 8 chr17 3251991 3252251 -82186229 + AluY SINE Alu 33 295 -16 286 171 89 0 chr17 3252251 3252367 -82186113 + GA-rich Low_complexity Low_complexity 9 138 0 325 372 16 0 chr17 3252856 3252985 -82185495 + MIR3 SINE MIR 60 190 -18 235 170 0 0 chr17 3253082 3253129 -82185351 - L1MA10 LINE L1 -10 6324 6278 2246 129 0 0 chr17 3253137 3253446 -82185034 - AluSx SINE Alu -3 309 1 882 220 6 6 chr17 3253448 3253630 -82184850 + MER58A DNA MER1_type 43 224 0 234 312 35 28 chr17 3254861 3255002 -82183478 + L1ME4a LINE L1 4561 4702 -1444 383 217 28 32 chr17 3255047 3255226 -82183254 + L1M2 LINE L1 5283 5463 -693 404 296 165 53 chr17 3255403 3255761 -82182719 + L1ME4a LINE L1 5620 6017 -104 2266 83 10 0 chr17 3255822 3256110 -82182370 - AluSc SINE Alu -18 291 1 2474 82 3 0 chr17 3256133 3256438 -82182042 - AluSp SINE Alu -7 306 1 2302 95 7 3 chr17 3256519 3256825 -82181655 + AluY SINE Alu 1 307 -4 1804 84 33 18 chr17 3256972 3257129 -82181351 + L1MA1 LINE L1 6026 6190 -112 2371 109 0 0 chr17 3257129 3257431 -82181049 + AluSx SINE Alu 1 302 -10 1804 84 33 18 chr17 3257431 3257546 -82180934 + L1MA1 LINE L1 6190 6302 0 2401 74 10 3 chr17 3257579 3257888 -82180592 + AluY SINE Alu 1 311 0 21 100 0 0 chr17 3258001 3258071 -82180409 + AT_rich Low_complexity Low_complexity 1 70 0 1925 154 0 10 chr17 3258199 3258491 -82179989 + AluJo SINE Alu 5 293 -19 942 153 35 0 chr17 3258491 3258635 -82179845 - AluJb SINE Alu -162 150 2 810 135 15 60 chr17 3258752 3258885 -82179595 + FLAM_C SINE Alu 1 127 -16 1570 109 9 5 chr17 3259721 3259932 -82178548 + AluSp SINE Alu 1 212 -101 318 130 0 0 chr17 3259932 3259986 -82178494 + FLAM SINE Alu 78 131 -2 285 366 92 7 chr17 3260079 3260232 -82178248 + L3 LINE CR1 355 520 -1057 808 299 267 20 chr17 3260262 3261000 -82177480 + L3 LINE CR1 648 1567 -10 706 274 101 21 chr17 3261111 3261348 -82177132 + MIR SINE MIR 7 262 0 816 285 37 32 chr17 3261494 3261600 -82176880 - MIR SINE MIR -1 261 157 2487 92 0 0 chr17 3261600 3261905 -82176575 + AluSg SINE Alu 1 305 -5 816 285 37 32 chr17 3261905 3262044 -82176436 - MIR SINE MIR -105 157 15 240 242 0 32 chr17 3262050 3262096 -82176384 + MER5B DNA MER1_type 1 46 -132 2181 133 3 0 chr17 3262096 3262405 -82176075 + AluSg SINE Alu 1 310 0 240 242 0 32 chr17 3262405 3262420 -82176060 + MER5B DNA MER1_type 46 60 -118 2195 85 32 0 chr17 3262444 3262727 -82175753 + AluSg SINE Alu 1 292 -18 1767 100 60 8 chr17 3262738 3262988 -82175492 + AluSg SINE Alu 45 307 -3 29 0 0 0 chr17 3263207 3263236 -82175244 + AT_rich Low_complexity Low_complexity 1 29 0 320 282 137 3 chr17 3263237 3263354 -82175126 - MIR SINE MIR -65 143 55 644 278 44 8 chr17 3263861 3264113 -82174367 + MIR SINE MIR 2 262 0 2336 99 0 0 chr17 3264582 3264875 -82173605 - AluSx SINE Alu -19 293 1 208 205 26 0 chr17 3265041 3265080 -82173400 + MIR SINE MIR 40 79 -129 335 200 0 0 chr17 3265651 3265711 -82172769 + L2 LINE L2 3213 3272 0 251 330 22 11 chr17 3265795 3265886 -82172594 - MIR SINE MIR -115 147 56 2257 87 35 0 chr17 3266213 3266502 -82171978 - AluSc SINE Alu -10 299 1 1183 155 0 0 chr17 3266902 3267076 -82171404 + AluJb SINE Alu 125 298 -14 2050 129 0 0 chr17 3267375 3267654 -82170826 + AluSx SINE Alu 6 284 -28 1716 166 8 0 chr17 3267906 3268171 -82170309 - AluJb SINE Alu -45 267 1 1580 186 43 7 chr17 3268460 3268761 -82169719 - AluJo SINE Alu 0 312 1 2140 124 10 3 chr17 3268764 3269070 -82169410 - AluSx SINE Alu -3 309 2 336 331 23 39 chr17 3269405 3269535 -82168945 + MIR SINE MIR 3 130 -132 187 253 203 0 chr17 3269485 3269564 -82168916 + L2 LINE L2 2019 2113 -1201 * 206 220 231 22 chr17 3269705 3269796 -82168684 + L2 LINE L2 3192 3301 -12 1911 100 4 0 chr17 3269796 3270045 -82168435 + AluSp SINE Alu 1 250 -63 946 44 9 0 chr17 3270047 3270180 -82168300 + AluSp/q SINE Alu 169 302 0 251 183 366 0 chr17 3270296 3270367 -82168113 - FLAM_A SINE Alu -23 110 14 591 226 242 0 chr17 3271761 3271947 -82166533 - MIR SINE MIR -2 260 30 184 271 294 0 chr17 3272046 3272131 -82166349 - MIR SINE MIR -63 145 36 1039 121 0 0 chr17 3272269 3272513 -82165967 - FLAM_C SINE Alu 0 244 1 247 254 127 87 chr17 3272515 3272641 -82165839 + MIR3 SINE MIR 58 188 -20 542 208 82 60 chr17 3272671 3272854 -82165626 + MIR SINE MIR 20 206 -56 2206 84 49 0 chr17 3272999 3273284 -82165196 + AluSg SINE Alu 1 299 -11 180 0 0 0 chr17 3273315 3273335 -82165145 + (TG)n Simple_repeat Simple_repeat 2 21 0 627 253 78 34 chr17 3273786 3274075 -82164405 - LTR37B LTR ERV1 0 458 139 2670 43 0 0 chr17 3274087 3274389 -82164091 - AluY SINE Alu -9 302 1 2577 70 0 10 chr17 3274394 3274708 -82163772 - AluY SINE Alu 0 311 1 2143 104 0 7 chr17 3274890 3275177 -82163303 - AluSg1 SINE Alu -23 286 2 328 320 77 37 chr17 3275197 3275469 -82163011 - L2 LINE L2 -1267 2047 1765 2071 135 0 0 chr17 3275501 3275809 -82162671 - AluSx SINE Alu 0 308 1 2169 95 48 7 chr17 3276202 3276496 -82161984 - AluSx SINE Alu -6 306 1 209 271 0 17 chr17 3276523 3276582 -82161898 + CT-rich Low_complexity Low_complexity 1 58 0 2183 90 4 0 chr17 3276583 3276861 -82161619 - AluSg SINE Alu -31 279 1 507 311 167 37 chr17 3276876 3277550 -82160930 + L2 LINE L2 1928 2513 -759 1926 163 10 0 chr17 3277550 3277856 -82160624 - AluJb SINE Alu -1 311 3 507 311 167 37 chr17 3277856 3278380 -82160100 + L2 LINE L2 2513 3272 0 2402 66 0 7 chr17 3278515 3278803 -82159677 + AluSg SINE Alu 10 295 -15 237 33 0 0 chr17 3278804 3278834 -82159646 + (TCTCCC)n Simple_repeat Simple_repeat 2 31 0 10935 30 16 87 chr17 3278834 3280317 -82158163 + SVA Other Other 1 1378 -8 537 115 29 132 chr17 3280330 3280481 -82157999 + L1MC3 LINE L1 5891 6056 -1729 2165 105 0 39 chr17 3280481 3280653 -82157827 - AluSg SINE Alu -16 294 138 2360 70 0 3 chr17 3280653 3280939 -82157541 - AluY SINE Alu -26 285 1 2165 105 0 39 chr17 3280939 3281072 -82157408 - AluSg SINE Alu -172 138 1 537 115 29 132 chr17 3281072 3281334 -82157146 + L1MC3 LINE L1 6056 6343 -1442 2155 104 14 0 chr17 3281334 3281623 -82156857 - AluSx SINE Alu -19 293 1 537 115 29 132 chr17 3281623 3281675 -82156805 + L1MC3 LINE L1 6343 6399 -1386 2596 54 0 0 chr17 3281675 3281971 -82156509 - AluY SINE Alu -15 296 1 537 115 29 132 chr17 3281971 3281988 -82156492 + L1MC3 LINE L1 6399 7783 -2 562 189 9 9 chr17 3282002 3282108 -82156372 + MER5B DNA MER1_type 46 151 -27 207 313 0 0 chr17 3283133 3283181 -82155299 - L2 LINE L2 -18 3254 3207 3904 183 55 31 chr17 3283218 3283297 -82155183 + MER21B LTR ERV1 6 82 -781 2571 56 0 3 chr17 3283297 3283601 -82154879 - AluY SINE Alu -8 303 1 3904 183 55 31 chr17 3283601 3284282 -82154198 + MER21B LTR ERV1 82 790 -73 2391 56 42 0 chr17 3284282 3284568 -82153912 - AluY SINE Alu -13 298 1 3904 183 55 31 chr17 3284568 3284638 -82153842 + MER21B LTR ERV1 790 857 -6 2275 70 20 20 chr17 3284655 3284955 -82153525 + AluSx SINE Alu 5 304 -8 364 284 63 0 chr17 3284969 3285064 -82153416 - MIR SINE MIR -115 147 47 2025 128 0 23 chr17 3287860 3288164 -82150316 - AluJb SINE Alu -15 297 1 2180 105 3 10 chr17 3288441 3288745 -82149735 + AluSq SINE Alu 1 302 -11 714 175 0 17 chr17 3288819 3288939 -82149541 + FLAM_C SINE Alu 1 118 -25 2017 116 17 0 chr17 3289177 3289469 -82149011 - AluJo SINE Alu -9 303 7 2429 55 0 0 chr17 3289480 3289773 -82148707 - AluY SINE Alu -18 293 1 414 141 0 0 chr17 3289773 3289844 -82148636 - MER94 DNA DNA -53 81 11 813 293 112 49 chr17 3291846 3291951 -82146529 - L2 LINE L2 0 3313 3216 2207 91 0 7 chr17 3291951 3292248 -82146232 - AluSq SINE Alu -18 295 1 813 293 112 49 chr17 3292248 3292842 -82145638 - L2 LINE L2 -97 3216 2564 243 263 66 13 chr17 3293754 3293830 -82144650 + L2 LINE L2 3192 3271 -1 2243 90 0 3 chr17 3293879 3294178 -82144302 - AluY SINE Alu -11 300 3 2355 57 37 0 chr17 3294184 3294484 -82143996 - AluY SINE Alu 0 311 1 298 293 40 0 chr17 3295436 3295535 -82142945 - MIR SINE MIR -59 149 47 2500 51 0 0 chr17 3295596 3295892 -82142588 - AluY SINE Alu -15 296 1 2462 64 0 6 chr17 3296529 3296883 -82141597 - AluY SINE Alu 0 352 1 2080 82 89 0 chr17 3296891 3297173 -82141307 - AluSx SINE Alu -5 307 1 181 286 0 0 chr17 3297990 3298032 -82140448 + L2 LINE L2 3272 3313 0 288 380 39 8 chr17 3298797 3298926 -82139554 - L2 LINE L2 0 3272 3140 926 251 25 4 chr17 3299320 3299599 -82138881 + L1MC4 LINE L1 7460 7744 -298 2105 119 0 3 chr17 3299605 3299900 -82138580 - AluSx SINE Alu -18 294 1 1036 96 0 7 chr17 3299900 3300036 -82138444 - AluSq/x SINE Alu -178 135 1 2502 52 0 3 chr17 3300067 3300374 -82138106 + AluY SINE Alu 1 306 -5 528 177 3 9 chr17 3300374 3300498 -82137982 + L1MC4 LINE L1 7670 7785 0 1624 168 45 17 chr17 3300519 3300810 -82137670 - AluJo SINE Alu -13 299 1 185 341 57 23 chr17 3301163 3301251 -82137229 + L2 LINE L2 3168 3258 -14 214 238 0 63 chr17 3301840 3301903 -82136577 - MIR SINE MIR -130 78 20 2419 83 0 0 chr17 3301973 3302285 -82136195 - AluSx SINE Alu 0 312 1 254 316 13 0 chr17 3302792 3302868 -82135612 + G-rich Low_complexity Low_complexity 1 77 0 194 100 0 0 chr17 3302906 3302936 -82135544 - L2 LINE L2 -20 3293 3264 418 270 91 102 chr17 3303007 3303196 -82135284 + L2 LINE L2 2232 2417 -897 191 35 0 35 chr17 3303196 3303225 -82135255 + (CAAAA)n Simple_repeat Simple_repeat 4 31 0 418 270 91 102 chr17 3303225 3303409 -82135071 + L2 LINE L2 2417 2601 -713 208 254 12 23 chr17 3303766 3303863 -82134617 + MIR SINE MIR 60 153 -61 231 36 0 0 chr17 3304008 3304036 -82134444 + (TATG)n Simple_repeat Simple_repeat 1 28 0 2256 106 0 0 chr17 3304038 3304341 -82134139 - AluSq SINE Alu -10 303 1 463 312 60 54 chr17 3304462 3305086 -82133394 + L2 LINE L2 2553 3211 -61 535 263 103 4 chr17 3305938 3306170 -82132310 - MER112 DNA MER1_type -1 259 5 387 286 7 57 chr17 3306366 3306506 -82131974 + MIR SINE MIR 56 188 -74 354 262 23 78 chr17 3307063 3307251 -82131229 - MIR3 SINE MIR -67 141 15 578 190 0 0 chr17 3307341 3307441 -82131039 - MIR SINE MIR -52 210 111 267 351 52 22 chr17 3308848 3308982 -82129498 - L3 LINE CR1 -18 1559 1422 190 119 119 0 chr17 3308982 3309024 -82129456 - L3 LINE CR1 -123 1454 1408 339 352 132 20 chr17 3310203 3310507 -82127973 + L3 LINE CR1 1176 1513 -64 2118 111 0 0 chr17 3311587 3311867 -82126613 + AluSx SINE Alu 11 290 -22 219 286 102 20 chr17 3312340 3312438 -82126042 + MIR SINE MIR 32 137 -71 382 311 107 0 chr17 3313121 3313243 -82125237 + L2 LINE L2 3179 3313 0 181 270 63 16 chr17 3313248 3313311 -82125169 - MIR3 SINE MIR -37 171 106 195 279 211 0 chr17 3313516 3313620 -82124860 - MIR SINE MIR -60 148 23 468 333 92 9 chr17 3313627 3313855 -82124625 + MIR SINE MIR 16 262 0 198 0 0 0 chr17 3314141 3314163 -82124317 + (TG)n Simple_repeat Simple_repeat 2 23 0 252 304 78 48 chr17 3315654 3315884 -82122596 + L2 LINE L2 2246 2482 -832 * 280 317 208 5 chr17 3315878 3316080 -82122400 + L2 LINE L2 2817 3059 -213 1300 267 32 32 chr17 3316394 3316829 -82121651 - L2 LINE L2 -13 3300 2866 315 296 26 17 chr17 3316875 3316990 -82121490 - L2 LINE L2 -189 3083 2968 216 351 53 0 chr17 3317088 3317202 -82121278 - L2 LINE L2 -561 2753 2634 21 0 0 0 chr17 3317700 3317721 -82120759 + GC_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr17 3318187 3318209 -82120271 + GC_rich Low_complexity Low_complexity 1 22 0 240 35 0 0 chr17 3318225 3318254 -82120226 + (CCCCG)n Simple_repeat Simple_repeat 4 32 0 30 77 0 0 chr17 3318284 3318349 -82120131 + GC_rich Low_complexity Low_complexity 1 65 0 529 341 38 8 chr17 3318975 3319239 -82119241 + L2 LINE L2 2442 2713 -601 545 278 157 39 chr17 3319289 3319570 -82118910 + L2 LINE L2 2957 3270 -2 887 252 44 53 chr17 3319585 3319906 -82118574 - MLT1J LTR MaLR -191 320 3 296 275 110 16 chr17 3319940 3319999 -82118481 - MIR SINE MIR -28 234 182 800 156 0 30 chr17 3319999 3320134 -82118346 + FLAM_C SINE Alu 3 133 0 296 275 110 16 chr17 3320134 3320243 -82118237 - MIR SINE MIR -80 182 42 316 367 43 31 chr17 3320263 3320587 -82117893 - L2 LINE L2 -1266 2048 1721 781 166 52 140 chr17 3320817 3320891 -82117589 - MER3 DNA MER1_type 0 209 130 2127 83 0 28 chr17 3320891 3321181 -82117299 + AluSx SINE Alu 11 292 -20 781 166 52 140 chr17 3321181 3321335 -82117145 - MER3 DNA MER1_type -79 130 1 299 273 26 0 chr17 3321715 3321792 -82116688 - MIR3 SINE MIR -22 186 108 455 305 43 7 chr17 3322333 3322474 -82116006 - MER5A DNA MER1_type -6 183 38 919 241 50 0 chr17 3322499 3322698 -82115782 + MER3 DNA MER1_type 1 209 0 885 196 25 6 chr17 3324431 3324594 -82113886 - FRAM SINE Alu 0 166 1 2227 99 3 0 chr17 3325046 3325348 -82113132 + AluSx SINE Alu 1 303 -9 2179 120 0 3 chr17 3325398 3325706 -82112774 + AluSx SINE Alu 1 307 -5 360 339 83 32 chr17 3325872 3326090 -82112390 + L2 LINE L2 3084 3312 -1 2448 67 0 0 chr17 3326294 3326594 -82111886 - AluY SINE Alu -11 300 1 633 230 14 0 chr17 3326700 3326848 -82111632 + MER58B DNA MER1_type 190 339 -2 551 360 5 5 chr17 3327042 3327245 -82111235 - MIR SINE MIR -24 238 36 1141 119 11 17 chr17 3327343 3327520 -82110960 - AluSg/x SINE Alu -3 309 134 2139 106 7 7 chr17 3327520 3327823 -82110657 - AluSx SINE Alu -9 303 1 2216 116 0 3 chr17 3327825 3328136 -82110344 - AluSx SINE Alu -2 310 1 2169 95 3 0 chr17 3330820 3331105 -82107375 + AluSq SINE Alu 28 313 0 806 271 50 39 chr17 3331213 3331364 -82107116 + MIR SINE MIR 2 159 -103 2224 82 0 7 chr17 3331364 3331658 -82106822 - AluSc SINE Alu -17 292 1 806 271 50 39 chr17 3331658 3331764 -82106716 + MIR SINE MIR 159 262 0 1692 240 52 26 chr17 3331978 3332436 -82106044 + MLT1K LTR MaLR 4 473 -3 342 0 0 0 chr17 3332518 3332556 -82105924 + (TG)n Simple_repeat Simple_repeat 2 39 0 2133 104 10 10 chr17 3333506 3333814 -82104666 + AluSq SINE Alu 1 308 -5 382 320 51 13 chr17 3334020 3334179 -82104301 + MIR SINE MIR 21 190 -61 2236 82 0 3 chr17 3334263 3334557 -82103923 - AluSg SINE Alu -17 293 1 837 136 8 0 chr17 3334792 3334924 -82103556 + AluJb SINE Alu 1 133 -179 245 317 19 10 chr17 3334926 3335030 -82103450 - L2 LINE L2 -12 3301 3197 292 207 0 0 chr17 3335030 3335088 -82103392 - Tigger5 DNA MER2_type 0 2323 2266 238 171 0 0 chr17 3335154 3335195 -82103285 - Tigger5 DNA MER2_type 0 2323 2283 2409 81 0 0 chr17 3335195 3335502 -82102978 - AluSx SINE Alu -5 307 1 219 374 53 16 chr17 3335546 3335733 -82102747 + L2 LINE L2 2334 2527 -787 528 216 0 26 chr17 3336035 3336151 -82102329 + L2 LINE L2 3199 3311 -2 346 309 24 48 chr17 3336185 3336198 -82102282 + Charlie8 DNA MER1_type 69 81 -260 1740 177 0 16 chr17 3336198 3336515 -82101965 - AluJb SINE Alu 0 312 1 222 37 0 0 chr17 3336519 3336546 -82101934 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 346 309 24 48 chr17 3336546 3336695 -82101785 + Charlie8 DNA MER1_type 84 232 -109 1180 249 3 21 chr17 3337070 3337359 -82101121 + MLT1K LTR MaLR 142 425 -163 2381 93 0 0 chr17 3337546 3337858 -82100622 - AluSx SINE Alu 0 312 1 215 88 0 0 chr17 3338253 3338287 -82100193 + L2 LINE L2 3025 3058 -214 191 294 0 0 chr17 3338290 3338341 -82100139 - L3 LINE CR1 -111 1466 1416 2126 101 20 3 chr17 3338358 3338654 -82099826 - AluSx SINE Alu -11 301 1 245 232 29 14 chr17 3339417 3339486 -82098994 + MIR SINE MIR 29 98 -164 205 121 0 0 chr17 3339576 3339609 -82098871 + L3 LINE CR1 1423 1455 -122 364 272 18 9 chr17 3339943 3340057 -82098423 + MIR3 SINE MIR 15 129 -79 386 184 53 35 chr17 3342288 3342402 -82096078 + MIR SINE MIR 37 152 -110 340 244 106 32 chr17 3342584 3342707 -82095773 - MIR3 SINE MIR -21 187 56 354 146 11 34 chr17 3343218 3343307 -82095173 + GA-rich Low_complexity Low_complexity 1 87 0 846 99 10 48 chr17 3343314 3343616 -82094864 + (GGGA)n Simple_repeat Simple_repeat 1 290 0 417 39 0 0 chr17 3343652 3343703 -82094777 + (TCC)n Simple_repeat Simple_repeat 1 51 0 407 229 48 9 chr17 3344136 3344241 -82094239 - MIR SINE MIR -79 183 75 1782 169 0 43 chr17 3344939 3345083 -82093397 + AluJb SINE Alu 1 150 -162 1731 153 3 3 chr17 3345083 3345394 -82093086 + AluSq SINE Alu 4 314 0 1782 169 0 43 chr17 3345394 3345574 -82092906 + AluJb SINE Alu 150 312 0 2383 87 0 3 chr17 3345732 3346080 -82092400 - AluSg SINE Alu 0 347 1 307 250 0 22 chr17 3346092 3346112 -82092368 - L1MA10 LINE L1 0 6334 6315 674 314 98 15 chr17 3346112 3346437 -82092043 - L1ME1 LINE L1 -9 6157 5806 194 246 0 49 chr17 3346981 3347042 -82091438 + MIR SINE MIR 88 145 -63 239 319 0 0 chr17 3347267 3347336 -82091144 + MER45A DNA AcHobo 5 73 -105 247 286 0 0 chr17 3347525 3347588 -82090892 - L1ME3 LINE L1 -7 6155 6093 2359 92 0 0 chr17 3347592 3347897 -82090583 - AluSx SINE Alu -7 305 1 382 202 61 0 chr17 3347903 3348002 -82090478 + MER45A DNA AcHobo 74 178 0 1705 122 54 14 chr17 3348483 3348787 -82089693 + AluSx SINE Alu 1 312 0 2148 90 4 0 chr17 3351818 3352096 -82086384 - AluSx SINE Alu -33 279 1 252 199 14 96 chr17 3355379 3355525 -82082955 + (CCCCAG)n Simple_repeat Simple_repeat 1 134 0 2183 80 28 0 chr17 3356093 3356382 -82082098 + AluSx SINE Alu 1 297 -15 2588 46 0 0 chr17 3356742 3357048 -82081432 - AluY SINE Alu -5 306 1 2073 110 0 0 chr17 3357345 3357671 -82080809 - AluSx SINE Alu 0 326 1 1754 169 0 3 chr17 3357671 3357961 -82080519 - AluJb SINE Alu -17 295 7 2346 50 4 0 chr17 3358227 3358529 -82079951 + AluSx SINE Alu 1 303 0 2241 90 3 0 chr17 3358685 3358984 -82079496 + AluY SINE Alu 3 302 -9 2320 89 0 0 chr17 3359140 3359444 -82079036 - AluSx SINE Alu -1 311 8 1594 176 53 7 chr17 3359454 3359738 -82078742 - AluJb SINE Alu -15 297 1 2221 106 3 0 chr17 3359747 3360050 -82078430 - AluSx SINE Alu -8 304 1 462 228 139 15 chr17 3360554 3360756 -82077724 + MLT1K LTR MaLR 30 256 -332 2330 76 0 0 chr17 3360763 3361054 -82077426 - AluSx SINE Alu -10 302 12 664 133 20 0 chr17 3361054 3361152 -82077328 - AluS SINE Alu -213 100 1 236 277 38 107 chr17 3361152 3361311 -82077169 + MLT1K LTR MaLR 249 396 -192 339 25 0 0 chr17 3361949 3361989 -82076491 + (CA)n Simple_repeat Simple_repeat 2 41 0 214 269 32 11 chr17 3362232 3362325 -82076155 + (CA)n Simple_repeat Simple_repeat 1 95 0 205 370 11 0 chr17 3363108 3363200 -82075280 + G-rich Low_complexity Low_complexity 3 95 0 2136 108 0 0 chr17 3363379 3363667 -82074813 + AluSx SINE Alu 1 288 -24 2099 110 31 0 chr17 3363774 3364064 -82074416 - AluSx SINE Alu -13 299 1 1889 165 3 0 chr17 3364113 3364410 -82074070 + AluJo SINE Alu 1 298 -14 798 233 75 43 chr17 3364634 3364734 -82073746 + L1ME2 LINE L1 5724 5819 -345 2440 69 0 7 chr17 3364734 3365040 -82073440 + AluSc SINE Alu 1 304 -5 798 233 75 43 chr17 3365040 3365261 -82073219 + L1ME2 LINE L1 5819 6055 -109 213 65 0 0 chr17 3365261 3365292 -82073188 + (T)n Simple_repeat Simple_repeat 1 31 0 665 106 0 0 chr17 3365302 3365387 -82073093 - AluJ/FLAM SINE Alu -226 86 2 383 286 0 0 chr17 3365394 3365499 -82072981 + L1ME2 LINE L1 6050 6154 -10 2217 106 0 0 chr17 3365734 3366035 -82072445 - AluSx SINE Alu -11 301 1 1778 116 64 4 chr17 3368233 3368534 -82069946 + AluSx SINE Alu 1 317 0 504 350 86 0 chr17 3369188 3369491 -82068989 + L2 LINE L2 2439 2767 -547 25 65 0 0 chr17 3370221 3370267 -82068213 + GC_rich Low_complexity Low_complexity 1 46 0 224 255 255 20 chr17 3370657 3370759 -82067721 + MIR SINE MIR 20 145 -63 270 229 55 73 chr17 3370895 3371004 -82067476 - L3 LINE CR1 -101 1476 1370 2213 88 14 7 chr17 3371193 3371489 -82066991 + AluSc SINE Alu 1 298 -11 2030 107 3 27 chr17 3371497 3371797 -82066683 + AluSx SINE Alu 1 293 -19 437 313 78 6 chr17 3373169 3373348 -82065132 + L2 LINE L2 3094 3285 -28 908 142 15 0 chr17 3373812 3373946 -82064534 - AluJo SINE Alu -176 136 1 2329 98 3 0 chr17 3374074 3374381 -82064099 + AluSx SINE Alu 1 308 -4 871 205 35 57 chr17 3374798 3375027 -82063453 + MIR SINE MIR 39 262 0 1887 131 0 0 chr17 3375107 3375374 -82063106 + AluSq SINE Alu 1 267 -46 2263 70 0 7 chr17 3375390 3375675 -82062805 - AluSq SINE Alu -14 299 17 825 124 0 8 chr17 3376291 3376459 -82062021 + AluSg/x SINE Alu 175 312 0 753 152 42 55 chr17 3377184 3377323 -82061157 + MER5A DNA MER1_type 8 146 -43 1846 98 58 4 chr17 3377323 3377597 -82060883 - AluSx SINE Alu -23 289 1 753 152 42 55 chr17 3377597 3377622 -82060858 + MER5A DNA MER1_type 146 170 -19 956 187 36 67 chr17 3377761 3377821 -82060659 + MER20 DNA MER1_type 1 61 -158 1834 161 0 7 chr17 3377821 3378119 -82060361 - AluJo SINE Alu -16 296 1 956 187 36 67 chr17 3378119 3378283 -82060197 + MER20 DNA MER1_type 61 218 -1 274 242 30 106 chr17 3379174 3379306 -82059174 - MIR3 SINE MIR -10 198 77 2373 61 10 0 chr17 3379725 3380021 -82058459 - AluSg SINE Alu -11 299 1 226 344 23 42 chr17 3380040 3380269 -82058211 - MIR SINE MIR -8 254 30 216 310 56 0 chr17 3380338 3380409 -82058071 + MER5A DNA MER1_type 9 83 -106 2232 81 0 0 chr17 3381097 3381409 -82057071 - AluSx SINE Alu 0 312 1 366 184 11 35 chr17 3381489 3381576 -82056904 + MLT1I LTR MaLR 3 87 -322 553 247 117 7 chr17 3381651 3381805 -82056675 + MER3 DNA MER1_type 4 127 -82 494 286 47 52 chr17 3381816 3382029 -82056451 + MLT1I LTR MaLR 197 408 -1 598 290 65 9 chr17 3382368 3382582 -82055898 - MIR SINE MIR -30 232 7 693 288 64 0 chr17 3383290 3383509 -82054971 + MIR SINE MIR 8 240 -22 400 221 106 35 chr17 3383529 3383642 -82054838 + L2 LINE L2 3191 3311 -2 257 370 31 0 chr17 3383640 3383767 -82054713 + L2 LINE L2 2715 2845 -469 * 367 148 0 0 chr17 3383835 3383896 -82054584 - L1MA7 LINE L1 -3 6288 6228 416 230 29 10 chr17 3383923 3384027 -82054453 - L1MC4 LINE L1 -1339 6983 1996 382 246 0 26 chr17 3384006 3384121 -82054359 - L1MC4 LINE L1 -1339 6983 1995 * 320 259 25 25 chr17 3384051 3384126 -82054354 + L1MC3 LINE L1 6571 6646 -1134 * 2009 113 3 27 chr17 3384126 3384426 -82054054 - AluSx SINE Alu -19 293 1 340 367 136 0 chr17 3385844 3386108 -82052372 + L1MC/D LINE L1 5366 5665 -2143 506 337 16 11 chr17 3386993 3387177 -82051303 - MIR SINE MIR -55 207 23 253 260 0 14 chr17 3387429 3387502 -82050978 - MIR SINE MIR -122 140 69 * 945 243 20 0 chr17 3387473 3387675 -82050805 + MIR SINE MIR 57 262 0 39 22 0 0 chr17 3389351 3389397 -82049083 + GC_rich Low_complexity Low_complexity 1 46 0 26 50 0 0 chr17 3389585 3389625 -82048855 + GC_rich Low_complexity Low_complexity 1 40 0 25 0 0 0 chr17 3389662 3389687 -82048793 + GC_rich Low_complexity Low_complexity 1 25 0 33 0 0 0 chr17 3389711 3389744 -82048736 + GC_rich Low_complexity Low_complexity 1 33 0 2018 108 3 46 chr17 3391077 3391429 -82047051 - AluSx SINE Alu 0 338 1 1675 149 0 81 chr17 3391432 3391753 -82046727 - AluJb SINE Alu -17 295 1 232 379 47 18 chr17 3391761 3391930 -82046550 - L3 LINE CR1 -818 759 586 1619 83 0 0 chr17 3392634 3392876 -82045604 - AluSg/x SINE Alu 0 322 81 630 139 0 170 chr17 3392877 3393042 -82045438 - AluSq/x SINE Alu -175 137 1 251 347 107 37 chr17 3393155 3393397 -82045083 - L2 LINE L2 -429 2885 2627 255 198 176 11 chr17 3393489 3393580 -82044900 - MIR SINE MIR -18 244 139 761 190 0 7 chr17 3393646 3393783 -82044697 - FLAM_A SINE Alu -6 136 1 4030 195 34 35 chr17 3393787 3393823 -82044657 + MER45B DNA AcHobo 67 102 -1479 2303 85 0 3 chr17 3393823 3394128 -82044352 - AluSx SINE Alu -8 304 1 4030 195 34 35 chr17 3394128 3394889 -82043591 + MER45B DNA AcHobo 102 862 -719 2219 93 0 26 chr17 3394889 3395199 -82043281 + AluSx SINE Alu 1 302 -10 4030 195 34 35 chr17 3395199 3395302 -82043178 + MER45B DNA AcHobo 862 969 -612 1609 176 3 37 chr17 3395302 3395625 -82042855 - AluJo SINE Alu 0 312 1 4030 195 34 35 chr17 3395625 3395696 -82042784 + MER45B DNA AcHobo 969 1039 -1 274 283 186 18 chr17 3395697 3395810 -82042670 - MIR SINE MIR -116 146 15 192 375 125 23 chr17 3395916 3396132 -82042348 + L2 LINE L2 2569 2806 -508 231 326 23 30 chr17 3396345 3396477 -82042003 - MIR3 SINE MIR -27 181 51 2300 96 0 0 chr17 3396817 3397120 -82041360 + AluSq SINE Alu 1 303 -10 1765 154 33 10 chr17 3397125 3397430 -82041050 + AluJo SINE Alu 1 312 0 244 234 218 16 chr17 3397596 3397720 -82040760 - L2 LINE L2 -188 3084 2936 335 261 85 8 chr17 3399039 3399169 -82039311 + L2 LINE L2 2876 3015 -257 257 380 52 18 chr17 3399884 3400113 -82038367 + L2 LINE L2 2826 3062 -210 230 390 16 24 chr17 3400276 3400399 -82038081 + L2 LINE L2 3191 3312 -1 2202 107 3 10 chr17 3400569 3400742 -82037738 - AluSq SINE Alu -6 307 135 2487 68 0 0 chr17 3400742 3401049 -82037431 - AluY SINE Alu -4 307 1 2202 107 3 10 chr17 3401049 3401184 -82037296 - AluSq SINE Alu -178 135 1 279 284 34 23 chr17 3402890 3402978 -82035502 - MIR SINE MIR -170 92 4 373 286 95 8 chr17 3403177 3403307 -82035173 + MIR SINE MIR 42 181 -60 2241 79 3 13 chr17 3403332 3403637 -82034843 + AluSx SINE Alu 1 302 -10 627 244 78 0 chr17 3404274 3404454 -82034026 + MIR SINE MIR 9 202 -60 585 257 170 61 chr17 3404535 3404912 -82033568 + MLT1L LTR MaLR 122 539 -76 808 230 0 0 chr17 3404913 3405091 -82033389 - AluSg/x SINE Alu -1 311 134 2224 106 0 3 chr17 3405115 3405417 -82033063 + AluSg SINE Alu 1 301 -9 1571 142 0 4 chr17 3405575 3405807 -82032673 - AluJo SINE Alu -81 231 1 538 261 6 24 chr17 3405807 3405972 -82032508 + MLT1K LTR MaLR 421 582 -6 326 276 38 0 chr17 3406864 3406969 -82031511 + MIR3 SINE MIR 85 193 -15 282 29 0 0 chr17 3407394 3407429 -82031051 + (CAAAA)n Simple_repeat Simple_repeat 3 37 0 2184 107 0 3 chr17 3407551 3407850 -82030630 - AluSx SINE Alu -14 298 1 2088 93 7 0 chr17 3408775 3409087 -82029393 + AluY SINE Alu 1 314 0 389 282 83 33 chr17 3409298 3409479 -82029001 + MLT1K LTR MaLR 396 585 -3 3673 96 57 0 chr17 3409984 3410144 -82028336 - MER41A LTR ERV1 0 554 405 2236 111 7 0 chr17 3410144 3410451 -82028029 - AluSg SINE Alu -1 309 1 3673 96 57 0 chr17 3410451 3410813 -82027667 - MER41A LTR ERV1 -149 405 2 2256 96 3 0 chr17 3411039 3411342 -82027138 - AluSp SINE Alu -9 304 1 199 293 81 20 chr17 3414323 3414422 -82024058 + L3 LINE CR1 1151 1255 -322 638 183 82 127 chr17 3416142 3416664 -82021816 + Charlie1 DNA MER1_type 5 2749 -12 367 276 82 18 chr17 3417241 3417411 -82021069 + MIR3 SINE MIR 23 203 -5 1036 174 38 136 chr17 3418187 3418503 -82019977 + AluY SINE Alu 11 295 -16 2214 104 0 19 chr17 3418574 3418890 -82019590 + AluSg SINE Alu 1 310 0 927 192 6 24 chr17 3419080 3419247 -82019233 + FRAM SINE Alu 3 166 0 1771 166 0 7 chr17 3419255 3419550 -82018930 + AluJb SINE Alu 1 293 -19 568 276 165 11 chr17 3420586 3421028 -82017452 + L1ME4a LINE L1 4061 4570 -1576 490 133 0 0 chr17 3421028 3421103 -82017377 + AluJ/FRAM SINE Alu 226 300 -12 530 309 76 12 chr17 3421107 3421437 -82017043 + L1ME4a LINE L1 4918 5268 -878 207 348 0 14 chr17 3422443 3422512 -82015968 - MIR SINE MIR -125 83 16 411 209 23 0 chr17 3422836 3422922 -82015558 - L2 LINE L2 -8 3264 3177 2519 38 0 0 chr17 3425232 3425523 -82012957 + AluY SINE Alu 1 291 -20 563 242 242 15 chr17 3425745 3425943 -82012537 - MIR SINE MIR -6 256 14 1090 168 89 5 chr17 3426258 3426460 -82012020 - AluJo SINE Alu -1 311 93 243 326 141 44 chr17 3427405 3427767 -82010713 - L2 LINE L2 -10 3262 2866 2175 93 3 0 chr17 3428333 3428622 -82009858 + AluSx SINE Alu 1 290 -22 194 229 16 49 chr17 3429002 3429063 -82009417 + L3 LINE CR1 1344 1402 -175 36 53 0 0 chr17 3431067 3431124 -82007356 + AT_rich Low_complexity Low_complexity 1 57 0 732 159 0 51 chr17 3431124 3431262 -82007218 - FLAM_A SINE Alu -1 132 2 1229 153 55 0 chr17 3431285 3431521 -82006959 - MER57A LTR ERV1 -25 378 130 272 239 50 107 chr17 3431753 3431846 -82006634 + MLT1J LTR MaLR 276 373 -138 5593 50 7 29 chr17 3431846 3432573 -82005907 - SVA Other Other 0 1386 676 272 239 50 107 chr17 3432573 3432668 -82005812 + MLT1J LTR MaLR 373 511 0 503 132 0 0 chr17 3433716 3433792 -82004688 - AluJo SINE Alu -11 301 226 1380 151 27 0 chr17 3434005 3434224 -82004256 - AluJo SINE Alu -87 225 1 266 287 20 10 chr17 3435137 3435238 -82003242 + L1ME4a LINE L1 5544 5645 -476 357 329 59 26 chr17 3435419 3435571 -82002909 + L1ME4a LINE L1 5935 6091 -30 248 305 124 11 chr17 3435573 3435750 -82002730 - L3b LINE CR1 -114 1469 1273 192 125 0 0 chr17 3436491 3436523 -82001957 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 286 329 117 21 chr17 3436549 3436858 -82001622 + L2 LINE L2 2717 3056 -257 318 306 124 8 chr17 3436888 3437009 -82001471 + L2 LINE L2 3136 3270 -2 1468 187 0 39 chr17 3437125 3437430 -82001050 + AluJo SINE Alu 1 293 -19 36 53 0 0 chr17 3439440 3439497 -81998983 + AT_rich Low_complexity Low_complexity 1 57 0 705 159 0 51 chr17 3439497 3439635 -81998845 - FLAM_A SINE Alu -1 132 2 1366 153 55 0 chr17 3439658 3439894 -81998586 - MER57A LTR ERV1 -25 378 130 423 274 189 31 chr17 3439916 3440303 -81998177 + MLT1J LTR MaLR 64 511 0 492 132 0 0 chr17 3441351 3441427 -81997053 - AluJo SINE Alu -11 301 226 1325 151 27 0 chr17 3441640 3441859 -81996621 - AluJo SINE Alu -87 225 1 266 287 20 10 chr17 3442772 3442873 -81995607 + L1ME4a LINE L1 5544 5645 -476 316 286 60 53 chr17 3443054 3443187 -81995293 + L1ME4a LINE L1 5935 6068 -53 263 299 124 11 chr17 3443208 3443385 -81995095 - L3b LINE CR1 -114 1469 1273 192 125 0 0 chr17 3444126 3444158 -81994322 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 286 329 117 21 chr17 3444184 3444493 -81993987 + L2 LINE L2 2717 3056 -257 318 306 124 8 chr17 3444523 3444644 -81993836 + L2 LINE L2 3136 3270 -2 1451 190 0 39 chr17 3444760 3445065 -81993415 + AluJo SINE Alu 1 293 -19 2094 126 0 3 chr17 3445409 3445719 -81992761 - AluSx SINE Alu -3 309 1 2051 126 17 0 chr17 3446625 3446919 -81991561 + AluSx SINE Alu 1 299 -13 1624 254 44 45 chr17 3446931 3447458 -81991022 + L1MEc LINE L1 35 560 -5836 756 273 89 61 chr17 3447481 3447733 -81990747 + L1MEc LINE L1 1277 1520 -4876 2114 111 7 3 chr17 3447733 3448040 -81990440 - AluSq SINE Alu -5 308 1 756 273 89 61 chr17 3448040 3448347 -81990133 + L1MEc LINE L1 1520 1852 -4544 539 172 35 52 chr17 3448381 3448497 -81989983 - FLAM_C SINE Alu -18 115 2 2285 91 3 0 chr17 3448507 3448815 -81989665 - AluSq SINE Alu -4 309 1 1296 144 12 37 chr17 3448815 3449058 -81989422 - AluJo SINE Alu -10 302 66 502 202 0 40 chr17 3449076 3449175 -81989305 - FLAM_C SINE Alu -19 124 30 277 172 129 32 chr17 3449186 3449279 -81989201 - L1MEc LINE L1 -4258 2138 2037 732 212 109 0 chr17 3449285 3449478 -81989002 - L1MEc LINE L1 -4320 2076 1863 1892 133 7 7 chr17 3449487 3449787 -81988693 + AluSx SINE Alu 1 300 -12 621 150 150 33 chr17 3449790 3449943 -81988537 + L1MEc LINE L1 2229 2399 -3997 426 218 51 0 chr17 3450029 3450107 -81988373 - MER2 DNA MER2_type -262 83 2 1692 234 10 103 chr17 3450110 3450837 -81987643 + L1MEc LINE L1 2367 3160 -3055 2129 90 7 0 chr17 3450837 3451125 -81987355 + AluSq SINE Alu 22 311 -2 1692 234 10 103 chr17 3451125 3451136 -81987344 + L1MEc LINE L1 3160 3170 -3045 794 178 23 0 chr17 3451136 3451265 -81987215 + FLAM_C SINE Alu 2 133 0 1692 234 10 103 chr17 3451265 3451486 -81986994 + L1MEc LINE L1 3170 3362 -2853 270 157 0 39 chr17 3451594 3451645 -81986835 + Tigger5 DNA MER2_type 7 55 -2268 * 374 173 13 40 chr17 3451612 3451687 -81986793 + Tigger5 DNA MER2_type 2251 2323 0 304 111 0 0 chr17 3451704 3451749 -81986731 + L1ME3A LINE L1 4564 4608 -1538 734 136 183 8 chr17 3451762 3451955 -81986525 - AluJo SINE Alu -24 288 2 419 214 103 0 chr17 3451999 3452116 -81986364 + L1ME3A LINE L1 4633 4761 -1385 990 107 0 0 chr17 3452117 3452248 -81986232 + AluSq/x SINE Alu 1 131 -182 2030 119 0 3 chr17 3452253 3452586 -81985894 + AluSx SINE Alu 1 332 0 741 220 62 5 chr17 3452587 3452796 -81985684 + L1ME3A LINE L1 4752 4972 -1174 2157 112 0 10 chr17 3454567 3454880 -81983600 - AluSg SINE Alu 0 310 1 260 209 80 92 chr17 3455779 3455942 -81982538 - L1ME4a LINE L1 -27 6094 5934 1913 141 0 7 chr17 3455946 3456243 -81982237 + AluJb SINE Alu 1 295 -17 186 191 0 0 chr17 3456244 3456286 -81982194 + (TATG)n Simple_repeat Simple_repeat 2 43 0 25 0 0 0 chr17 3456289 3456314 -81982166 + AT_rich Low_complexity Low_complexity 1 25 0 301 252 144 50 chr17 3456447 3456586 -81981894 + HAL1 LINE L1 928 1079 -1428 1811 89 0 0 chr17 3457070 3457306 -81981174 + AluSq SINE Alu 23 258 -55 246 279 0 0 chr17 3457383 3457444 -81981036 + L1MC4 LINE L1 6460 6520 -1522 630 215 59 59 chr17 3457459 3457678 -81980802 - MER20 DNA MER1_type 0 219 1 2212 81 13 0 chr17 3457684 3457982 -81980498 + AluSq SINE Alu 1 302 -11 234 0 0 0 chr17 3458009 3458035 -81980445 + (CA)n Simple_repeat Simple_repeat 2 27 0 1254 200 216 0 chr17 3458073 3458378 -81980102 + L1MC4 LINE L1 6719 7089 -953 2065 234 55 26 chr17 3458379 3458781 -81979699 + L1MC4 LINE L1 7243 7671 -371 1615 194 10 3 chr17 3458781 3459090 -81979390 - AluJo SINE Alu -1 311 1 2065 234 55 26 chr17 3459090 3459303 -81979177 + L1MC4 LINE L1 7671 7876 -166 899 249 89 59 chr17 3459361 3459730 -81978750 + L1ME3A LINE L1 5492 5880 -290 1953 106 7 3 chr17 3459730 3460041 -81978439 + AluSx SINE Alu 1 312 0 899 249 89 59 chr17 3460041 3460134 -81978346 + L1ME3A LINE L1 5880 5969 -201 286 50 0 0 chr17 3460131 3460171 -81978309 - L1M4 LINE L1 -843 5303 5264 * 1781 132 7 7 chr17 3460387 3460700 -81977780 + AluSx SINE Alu 1 313 0 2496 46 0 3 chr17 3460845 3461148 -81977332 - AluY SINE Alu -9 302 1 305 357 124 16 chr17 3461208 3461393 -81977087 + HAL1b LINE L1 310 514 -834 382 292 51 45 chr17 3462779 3462957 -81975523 + L1M4 LINE L1 4530 4708 -1438 686 229 171 28 chr17 3462978 3463405 -81975075 + L1MC4 LINE L1 7555 8042 0 2252 88 0 10 chr17 3463879 3464186 -81974294 - AluSx SINE Alu -8 304 1 530 254 131 60 chr17 3464218 3464501 -81973979 + L2 LINE L2 3010 3312 -1 528 306 67 67 chr17 3464868 3465224 -81973256 + L2 LINE L2 2898 3253 -19 2216 110 0 0 chr17 3465713 3466021 -81972459 - AluSc SINE Alu -1 308 1 2163 96 3 0 chr17 3466076 3466367 -81972113 + AluSx SINE Alu 1 292 -20 2313 97 0 0 chr17 3467397 3467707 -81970773 - AluY SINE Alu -1 310 1 986 209 18 65 chr17 3468752 3468943 -81969537 + L1MC4 LINE L1 6820 7018 -1024 1780 166 7 0 chr17 3468943 3469239 -81969241 + AluJb SINE Alu 1 298 -14 2113 108 3 0 chr17 3469241 3469537 -81968943 + AluY SINE Alu 1 297 -14 986 209 18 65 chr17 3469537 3469620 -81968860 + L1MC4 LINE L1 7019 7084 -958 1787 94 50 43 chr17 3470293 3470592 -81967888 - AluSg SINE Alu -9 301 1 758 188 108 84 chr17 3470665 3470810 -81967670 - MIR SINE MIR -5 257 101 1816 136 7 4 chr17 3470810 3471119 -81967361 + AluJb SINE Alu 1 310 0 758 188 108 84 chr17 3471119 3471222 -81967258 - MIR SINE MIR -161 101 2 22 0 0 0 chr17 3472107 3472129 -81966351 + AT_rich Low_complexity Low_complexity 1 22 0 308 261 28 115 chr17 3472879 3473008 -81965472 + L1MC5 LINE L1 7651 7743 -218 2056 97 17 0 chr17 3473008 3473296 -81965184 - AluSx SINE Alu -19 293 1 308 261 28 115 chr17 3473296 3473453 -81965027 + L1MC5 LINE L1 7743 7912 -49 34 0 0 0 chr17 3474130 3474164 -81964316 + AT_rich Low_complexity Low_complexity 1 34 0 1847 153 0 0 chr17 3474165 3474447 -81964033 + AluSx SINE Alu 1 282 -30 356 379 73 24 chr17 3475847 3476256 -81962224 - L2 LINE L2 -18 3254 2826 261 380 120 12 chr17 3476303 3476627 -81961853 - L2 LINE L2 -575 2739 2381 220 231 77 0 chr17 3476910 3476962 -81961518 + L2 LINE L2 3258 3313 0 1551 142 46 4 chr17 3477379 3477639 -81960841 - MER1B DNA MER1_type 0 339 69 228 217 0 0 chr17 3478188 3478234 -81960246 - L2 LINE L2 -5 3308 3263 234 0 0 0 chr17 3478248 3478274 -81960206 + (TTA)n Simple_repeat Simple_repeat 2 27 0 244 231 92 15 chr17 3478314 3478379 -81960101 + MIR SINE MIR 25 94 -114 305 200 0 57 chr17 3478385 3478455 -81960025 - 5S rRNA rRNA -53 68 3 981 227 28 24 chr17 3479272 3479519 -81958961 - MIR SINE MIR -7 255 8 1656 182 7 3 chr17 3480173 3480470 -81958010 + AluJb SINE Alu 1 298 -14 573 192 90 30 chr17 3480544 3480711 -81957769 + L1ME4a LINE L1 5944 6120 -1 237 281 0 0 chr17 3481146 3481203 -81957277 - MIR SINE MIR -33 229 173 3598 282 143 45 chr17 3481212 3481863 -81956617 + L2 LINE L2 602 1188 -2125 1648 153 54 3 chr17 3481863 3482158 -81956322 + AluSx SINE Alu 1 310 -2 3598 282 143 45 chr17 3482158 3483987 -81954493 + L2 LINE L2 1188 3309 -4 188 291 0 0 chr17 3483955 3484010 -81954470 - MIR SINE MIR -48 214 160 * 493 231 130 0 chr17 3484889 3484997 -81953483 + FLAM_C SINE Alu 2 123 -20 280 125 42 0 chr17 3485146 3485194 -81953286 - Alu SINE Alu -4 298 249 1476 164 6 68 chr17 3485148 3485309 -81953171 - AluJb SINE Alu -16 296 162 2197 107 0 0 chr17 3485309 3485608 -81952872 - AluSx SINE Alu -13 299 1 1476 164 6 68 chr17 3485608 3485757 -81952723 - AluJb SINE Alu -150 162 5 1230 63 25 0 chr17 3486455 3486614 -81951866 + L1PA5 LINE L1 5989 6151 -3 1705 147 33 16 chr17 3486702 3487009 -81951471 + AluJb SINE Alu 1 312 0 673 226 96 26 chr17 3487135 3487405 -81951075 - L1MC5 LINE L1 -54 7907 7619 1624 137 0 113 chr17 3487429 3487764 -81950716 + AluJo SINE Alu 1 297 -5 238 318 124 31 chr17 3488286 3488415 -81950065 - MIR3 SINE MIR -14 194 54 24 77 0 0 chr17 3489077 3489129 -81949351 + AT_rich Low_complexity Low_complexity 1 52 0 281 212 47 0 chr17 3489139 3489224 -81949256 + L1ME4a LINE L1 5831 5919 -202 242 231 0 0 chr17 3489257 3489296 -81949184 + AluJo SINE Alu 2 40 -259 580 131 0 47 chr17 3489299 3489406 -81949074 - AluJo/FRAM SINE Alu -2 310 209 1517 182 14 0 chr17 3489406 3489681 -81948799 + AluJo SINE Alu 27 305 -7 366 279 161 0 chr17 3489705 3489866 -81948614 + L1ME4a LINE L1 5935 6121 0 1989 104 7 33 chr17 3489869 3490168 -81948312 - AluSq SINE Alu -22 291 1 362 316 43 0 chr17 3490282 3490399 -81948081 - L2 LINE L2 -8 3305 3184 2207 98 3 0 chr17 3491130 3491437 -81947043 + AluSx SINE Alu 1 308 -4 357 300 161 0 chr17 3491846 3491976 -81946504 - MIR3 SINE MIR -11 197 47 24 0 0 0 chr17 3492165 3492189 -81946291 + AT_rich Low_complexity Low_complexity 1 24 0 221 333 15 0 chr17 3492803 3492869 -81945611 - L2 LINE L2 -217 3055 2989 306 350 14 0 chr17 3492939 3493079 -81945401 - L2 LINE L2 -457 2857 2716 247 295 122 51 chr17 3493977 3494133 -81944347 - L2 LINE L2 -2 3270 3104 1705 161 0 29 chr17 3495010 3495320 -81943160 - AluJo SINE Alu -11 301 1 567 195 88 0 chr17 3496408 3496521 -81941959 - MER58A DNA MER1_type 0 160 38 2337 43 3 13 chr17 3497714 3498015 -81940465 - AluY SINE Alu -13 298 1 1894 137 0 29 chr17 3498036 3498351 -81940129 - AluSx SINE Alu -6 306 1 445 238 32 56 chr17 3498351 3498477 -81940003 + MER5B DNA MER1_type 5 127 -51 193 335 129 13 chr17 3501696 3501851 -81936629 - MIR SINE MIR -70 192 20 1004 182 9 40 chr17 3503112 3503337 -81935143 - AluJo SINE Alu -94 218 1 203 146 24 0 chr17 3503584 3503625 -81934855 + CT-rich Low_complexity Low_complexity 3 44 0 1134 101 24 0 chr17 3504541 3504709 -81933771 + AluSc SINE Alu 132 303 -6 237 273 114 45 chr17 3504709 3504841 -81933639 - MER112 DNA MER1_type -115 145 5 294 234 183 15 chr17 3505055 3505192 -81933288 + L3 LINE CR1 1346 1505 -72 1781 155 7 0 chr17 3505210 3505500 -81932980 - AluSx SINE Alu -19 293 2 581 265 155 0 chr17 3505927 3506127 -81932353 + MIR SINE MIR 6 236 -26 334 308 67 10 chr17 3506197 3506301 -81932179 + L2 LINE L2 3123 3232 -40 1602 181 0 37 chr17 3506534 3506855 -81931625 + AluSx SINE Alu 1 309 -3 1468 174 31 14 chr17 3506870 3507163 -81931317 - AluJo SINE Alu -14 298 1 678 215 117 27 chr17 3507236 3507459 -81931021 + L1MC5 LINE L1 7688 7930 -31 * 1809 254 53 30 chr17 3507457 3507994 -81930486 + L1PA14 LINE L1 405 928 -5226 1937 83 12 0 chr17 3507994 3508246 -81930234 - AluSc SINE Alu -54 255 1 541 156 37 18 chr17 3508255 3508364 -81930116 - L1MB7 LINE L1 0 6184 6074 1809 254 53 30 chr17 3508364 3508696 -81929784 + L1PA14 LINE L1 935 5780 -374 1579 107 0 0 chr17 3508736 3508952 -81929528 + AluSg SINE Alu 1 216 -94 2509 92 51 0 chr17 3508969 3509340 -81929140 + L1PA14 LINE L1 5769 6158 -3 2067 132 3 0 chr17 3509351 3509662 -81928818 + AluSx SINE Alu 1 312 0 2773 234 88 67 chr17 3509662 3510676 -81927804 + HAL1 LINE L1 1060 2107 -400 1870 155 3 3 chr17 3510676 3510979 -81927501 + AluJb SINE Alu 1 303 -9 2773 234 88 67 chr17 3510979 3511211 -81927269 + HAL1 LINE L1 2107 2333 -174 201 220 0 20 chr17 3511501 3511551 -81926929 - L2 LINE L2 -279 2993 2945 181 260 0 20 chr17 3511568 3511618 -81926862 - L2 LINE L2 -279 2993 2945 201 220 0 20 chr17 3511635 3511685 -81926795 - L2 LINE L2 -279 2993 2945 201 220 0 20 chr17 3511702 3511752 -81926728 - L2 LINE L2 -279 2993 2945 201 220 0 20 chr17 3511769 3511819 -81926661 - L2 LINE L2 -279 2993 2945 201 220 0 20 chr17 3511836 3511886 -81926594 - L2 LINE L2 -279 2993 2945 201 220 0 20 chr17 3511903 3511953 -81926527 - L2 LINE L2 -279 2993 2945 180 260 0 20 chr17 3511970 3512020 -81926460 - L2 LINE L2 -279 2993 2945 180 260 0 20 chr17 3512036 3512086 -81926394 - L2 LINE L2 -279 2993 2945 410 0 20 0 chr17 3513911 3513961 -81924519 + (TG)n Simple_repeat Simple_repeat 2 52 0 247 200 20 0 chr17 3513961 3514011 -81924469 + (CATA)n Simple_repeat Simple_repeat 2 52 0 220 289 141 74 chr17 3514514 3514560 -81923920 - MIR3 SINE MIR -62 146 104 2181 97 3 0 chr17 3514560 3514858 -81923622 + AluSg SINE Alu 3 301 -9 220 289 141 74 chr17 3514858 3514946 -81923534 - MIR3 SINE MIR -104 104 3 22 0 0 0 chr17 3515769 3515791 -81922689 + AT_rich Low_complexity Low_complexity 1 22 0 453 209 40 129 chr17 3516366 3516591 -81921889 - L1MC5 LINE L1 -46 7915 7711 1869 147 7 0 chr17 3516605 3516905 -81921575 - AluJb SINE Alu -10 302 1 832 286 96 49 chr17 3517224 3517763 -81920717 + L1M4 LINE L1 3658 4230 -1916 1202 121 0 0 chr17 3517934 3518108 -81920372 + AluSg/x SINE Alu 136 309 -3 2237 89 0 0 chr17 3518661 3518953 -81919527 + AluSq SINE Alu 1 292 -21 362 316 110 30 chr17 3519700 3519937 -81918543 + L3 LINE CR1 961 1216 -361 1764 170 3 3 chr17 3520475 3520781 -81917699 - AluJb SINE Alu -5 307 2 873 91 83 0 chr17 3521047 3521179 -81917301 + AluSp SINE Alu 1 143 -170 25 0 0 0 chr17 3521179 3521204 -81917276 + AT_rich Low_complexity Low_complexity 1 25 0 1307 76 17 0 chr17 3521207 3521413 -81917067 + AluSp SINE Alu 110 318 0 537 350 137 5 chr17 3521640 3522020 -81916460 - L3 LINE CR1 -344 1233 804 414 282 57 13 chr17 3522378 3522566 -81915914 - MIR SINE MIR -31 231 33 1985 105 0 48 chr17 3522692 3523005 -81915475 + AluSq SINE Alu 4 301 -12 285 304 64 59 chr17 3523809 3524013 -81914467 + L2 LINE L2 3086 3290 -23 1072 167 158 92 chr17 3524034 3524113 -81914367 - MER44D DNA MER2_type -1882 609 537 388 46 0 31 chr17 3524113 3524178 -81914302 + (TA)n Simple_repeat Simple_repeat 2 64 0 1072 167 158 92 chr17 3524178 3524227 -81914253 - MER44D DNA MER2_type -1954 537 493 2274 64 3 3 chr17 3524227 3524523 -81913957 + AluY SINE Alu 1 296 -15 1072 167 158 92 chr17 3524523 3524710 -81913770 - MER44D DNA MER2_type -1998 493 2 2201 84 0 19 chr17 3524761 3525069 -81913411 + AluSp SINE Alu 1 302 -11 1680 149 28 3 chr17 3525429 3525718 -81912762 + AluJb SINE Alu 1 296 -16 1903 124 14 7 chr17 3525813 3526103 -81912377 - AluSx SINE Alu -20 292 1 640 211 0 30 chr17 3526648 3526781 -81911699 - FLAM_C SINE Alu -9 134 6 958 137 0 0 chr17 3526893 3527039 -81911441 + MLT2A2 LTR ERVL 308 453 0 3715 122 14 21 chr17 3527039 3527072 -81911408 + HERVL-A2 LTR ERVL 1 33 -5621 2100 104 0 7 chr17 3527072 3527370 -81911110 - AluSg SINE Alu -14 296 1 3715 122 14 21 chr17 3527370 3527912 -81910568 + HERVL-A2 LTR ERVL 33 572 -5082 11022 107 13 0 chr17 3527914 3529391 -81909089 + HERVL LTR ERVL 2125 3620 -2034 231 260 39 77 chr17 3529405 3529509 -81908971 + MIR SINE MIR 113 212 -50 2334 78 0 7 chr17 3529773 3530081 -81908399 - AluSq SINE Alu -7 306 1 337 286 267 34 chr17 3530637 3530903 -81907577 + L2 LINE L2 2985 3312 -1 595 288 55 66 chr17 3530954 3531124 -81907356 + L1M4 LINE L1 4791 4961 -1185 1915 113 29 0 chr17 3531124 3531399 -81907081 - AluSq SINE Alu -22 291 9 595 288 55 66 chr17 3531399 3531683 -81906797 + L1M4 LINE L1 4961 5240 -906 1983 145 0 0 chr17 3531753 3532064 -81906416 - AluSx SINE Alu -1 311 1 215 235 0 86 chr17 3532080 3532118 -81906362 + MIR SINE MIR 186 215 -47 1813 124 10 29 chr17 3532118 3532424 -81906056 + AluJo SINE Alu 1 300 -12 215 235 0 86 chr17 3532424 3532466 -81906014 + MIR SINE MIR 215 259 -3 431 215 21 0 chr17 3532744 3532837 -81905643 - U13 snRNA snRNA -9 95 1 1544 174 27 14 chr17 3533459 3533753 -81904727 - AluJo SINE Alu -14 298 1 1739 124 84 0 chr17 3533764 3534037 -81904443 - AluSg SINE Alu -14 296 1 2134 141 0 0 chr17 3535003 3535302 -81903178 + AluSx SINE Alu 5 303 -9 261 0 0 0 chr17 3535353 3535382 -81903098 + (TA)n Simple_repeat Simple_repeat 2 30 0 1503 94 5 19 chr17 3535516 3535728 -81902752 + AluSq SINE Alu 94 302 -11 23 0 0 0 chr17 3535776 3535799 -81902681 + AT_rich Low_complexity Low_complexity 1 23 0 2279 112 0 22 chr17 3536379 3536693 -81901787 + AluY SINE Alu 1 307 -4 1593 62 5 0 chr17 3536859 3537051 -81901429 + AluSg/x SINE Alu 98 290 -22 2249 93 0 23 chr17 3537181 3537482 -81900998 + AluSc SINE Alu 5 298 -11 285 238 119 0 chr17 3537821 3537905 -81900575 - MIR SINE MIR -76 186 93 1633 164 0 57 chr17 3538321 3538667 -81899813 - AluJo SINE Alu 0 328 1 1839 141 40 13 chr17 3538832 3539131 -81899349 - AluSx SINE Alu -5 307 1 2182 101 6 19 chr17 3539190 3539507 -81898973 - AluSp SINE Alu 0 313 1 642 279 63 31 chr17 3539898 3540145 -81898335 + MIR SINE MIR 3 256 -6 717 251 0 6 chr17 3540400 3540583 -81897897 - MLT1E2-int LTR MaLR -1157 214 33 1572 235 70 16 chr17 3540624 3541050 -81897430 - MLT1E2 LTR MaLR 0 626 158 728 193 28 34 chr17 3541151 3541327 -81897153 - MLT1E2 LTR MaLR -330 175 1 2437 62 0 3 chr17 3542525 3542816 -81895664 - AluY SINE Alu -17 294 5 308 284 124 47 chr17 3543813 3543982 -81894498 + MIR SINE MIR 3 184 -78 2464 84 3 0 chr17 3544436 3544747 -81893733 - AluSp SINE Alu -1 312 1 192 77 0 0 chr17 3545279 3545305 -81893175 + (TA)n Simple_repeat Simple_repeat 2 27 0 2657 40 3 0 chr17 3545561 3545864 -81892616 - AluY SINE Alu -7 304 1 2121 112 7 0 chr17 3545866 3546160 -81892320 - AluSx SINE Alu -16 296 1 216 0 0 0 chr17 3546777 3546801 -81891679 + (A)n Simple_repeat Simple_repeat 1 24 0 1898 164 0 6 chr17 3546948 3547260 -81891220 + AluJb SINE Alu 1 310 -2 2004 133 7 13 chr17 3547917 3548217 -81890263 + AluJb SINE Alu 1 298 -14 1797 163 10 13 chr17 3548789 3549090 -81889390 + AluJb SINE Alu 1 300 -12 1588 153 24 0 chr17 3549115 3549370 -81889110 - AluJo SINE Alu -24 288 28 2087 138 3 13 chr17 3549609 3549921 -81888559 + AluSx SINE Alu 1 309 -3 2254 107 3 0 chr17 3550134 3550433 -81888047 - AluSp SINE Alu -13 300 1 1792 173 3 7 chr17 3551130 3551431 -81887049 - AluJb SINE Alu 0 312 13 297 285 304 0 chr17 3551456 3551726 -81886754 - L3 LINE CR1 -14 1563 1212 432 0 0 0 chr17 3552088 3552136 -81886344 + (TG)n Simple_repeat Simple_repeat 2 49 0 475 189 54 18 chr17 3553533 3553644 -81884836 - Charlie1 DNA MER1_type 0 2761 2647 189 0 0 0 chr17 3553799 3553820 -81884660 + (A)n Simple_repeat Simple_repeat 1 21 0 1944 131 16 16 chr17 3553870 3554175 -81884305 + AluSq SINE Alu 1 305 -8 243 91 0 0 chr17 3554192 3554225 -81884255 + Alu SINE Alu 1 33 -269 2052 108 9 41 chr17 3554227 3554543 -81883937 + AluSx SINE Alu 7 312 0 2409 78 10 3 chr17 3554552 3554859 -81883621 + AluSq SINE Alu 1 309 -4 1008 164 0 0 chr17 3554867 3555026 -81883454 + FRAM SINE Alu 9 167 -9 298 326 70 3 chr17 3555073 3555358 -81883122 - L1M4 LINE L1 -3442 2704 2401 35 0 0 0 chr17 3555380 3555415 -81883065 + AT_rich Low_complexity Low_complexity 1 35 0 720 62 42 0 chr17 3555415 3555511 -81882969 - HY3 scRNA scRNA -1 100 1 2201 112 7 3 chr17 3557121 3557424 -81881056 - AluSx SINE Alu -8 304 1 529 232 106 53 chr17 3557752 3557818 -81880662 + MER20 DNA MER1_type 2 63 -156 2149 132 0 0 chr17 3557818 3558114 -81880366 - AluSx SINE Alu -10 302 7 529 232 106 53 chr17 3558114 3558254 -81880226 + MER20 DNA MER1_type 63 219 0 1273 131 0 0 chr17 3559386 3559562 -81878918 - AluSp SINE Alu -4 309 134 188 296 19 0 chr17 3559780 3559834 -81878646 - MIR SINE MIR -56 152 98 337 249 69 83 chr17 3560162 3560312 -81878168 + L2 LINE L2 1564 1712 -1602 2269 117 0 0 chr17 3560312 3560620 -81877860 + AluSx SINE Alu 2 309 -3 337 249 69 83 chr17 3560620 3560686 -81877794 + L2 LINE L2 1712 1777 -1537 234 254 16 16 chr17 3560781 3560844 -81877636 - L2 LINE L2 -536 2778 2716 1029 141 22 5 chr17 3561082 3561266 -81877214 + L1PB2 LINE L1 5959 6145 -6 217 98 20 39 chr17 3561547 3561598 -81876882 + (GGA)n Simple_repeat Simple_repeat 2 51 0 665 237 63 10 chr17 3561635 3561842 -81876638 + HAL1 LINE L1 2184 2401 -106 571 84 36 0 chr17 3561857 3561940 -81876540 - HY3 scRNA scRNA -2 99 14 26 50 0 0 chr17 3562509 3562549 -81875931 + AT_rich Low_complexity Low_complexity 1 40 0 724 200 0 0 chr17 3562649 3562774 -81875706 + AluJo/FLAM SINE Alu 3 127 -175 2352 88 3 0 chr17 3562776 3563071 -81875409 + AluSg SINE Alu 1 296 -14 2194 110 3 0 chr17 3565160 3565451 -81873029 - AluSq SINE Alu -17 296 5 185 329 58 66 chr17 3566623 3566760 -81871720 + L2 LINE L2 3137 3272 0 2343 65 33 26 chr17 3567490 3567797 -81870683 - AluY SINE Alu -2 309 1 2042 137 0 29 chr17 3567818 3568133 -81870347 - AluSx SINE Alu -6 306 1 448 238 32 56 chr17 3568133 3568259 -81870221 + MER5B DNA MER1_type 5 127 -51 194 351 110 16 chr17 3571441 3571632 -81866848 - MIR SINE MIR -34 228 20 181 305 46 69 chr17 3571725 3571856 -81866624 - L2 LINE L2 -459 2855 2728 2037 168 0 0 chr17 3572918 3573228 -81865252 - AluJb SINE Alu -2 310 1 1574 206 3 19 chr17 3573251 3573561 -81864919 + AluJo SINE Alu 1 305 -7 378 363 142 20 chr17 3573722 3574130 -81864350 - L1MC4a LINE L1 -1876 5932 5475 2503 48 10 0 chr17 3575123 3575418 -81863062 + AluY SINE Alu 1 298 -13 187 274 0 65 chr17 3576271 3576333 -81862147 - MIR SINE MIR -81 181 124 274 276 104 22 chr17 3576683 3576817 -81861663 + MIR SINE MIR 47 191 -71 1760 70 86 150 chr17 3579465 3579792 -81858688 + AluSx SINE Alu 1 306 -6 2060 132 7 3 chr17 3579812 3580108 -81858372 - AluSx SINE Alu -15 297 1 1251 92 92 24 chr17 3584576 3584783 -81853697 - L1PB1 LINE L1 -2 6149 5929 325 286 47 24 chr17 3585354 3585502 -81852978 + MIR SINE MIR 38 183 -52 1497 125 133 26 chr17 3585888 3586152 -81852328 - AluSx SINE Alu -1 311 20 348 308 100 8 chr17 3586976 3587096 -81851384 + L2 LINE L2 3181 3311 -2 2003 128 7 3 chr17 3587395 3587684 -81850796 + AluJb SINE Alu 7 296 -16 292 345 50 66 chr17 3588467 3588768 -81849712 - L2 LINE L2 -45 3227 2932 2087 103 6 91 chr17 3588975 3589315 -81849165 + AluSx SINE Alu 1 311 -1 583 165 105 53 chr17 3592814 3592947 -81845533 - FLAM_A SINE Alu 0 142 3 243 320 46 86 chr17 3593116 3593291 -81845189 + MER5A DNA MER1_type 21 188 -1 212 242 158 32 chr17 3593866 3593961 -81844519 + L2 LINE L2 3204 3310 -3 687 193 0 17 chr17 3593997 3594116 -81844364 - FLAM_A SINE Alu -16 117 1 935 305 90 23 chr17 3594531 3595074 -81843406 + L2 LINE L2 2493 3068 -245 2232 128 0 0 chr17 3595202 3595506 -81842974 + AluSx SINE Alu 2 305 -7 2129 133 0 3 chr17 3596254 3596547 -81841933 - AluSx SINE Alu -11 301 10 2283 118 3 10 chr17 3596562 3596876 -81841604 - AluSx SINE Alu 0 312 1 2019 104 0 4 chr17 3597408 3597676 -81840804 - AluSx SINE Alu -45 267 1 1841 239 47 48 chr17 3598359 3598440 -81840040 + L1M4c LINE L1 2070 2150 -4232 2190 114 0 17 chr17 3598440 3598749 -81839731 + AluSx SINE Alu 1 304 0 1841 239 47 48 chr17 3598749 3598780 -81839700 + L1M4c LINE L1 2150 2180 -4202 1887 158 0 16 chr17 3598780 3599083 -81839397 + AluJo SINE Alu 1 298 -14 1841 239 47 48 chr17 3599083 3599353 -81839127 + L1M4c LINE L1 2180 2449 -3933 2583 60 0 0 chr17 3599353 3599653 -81838827 + AluY SINE Alu 1 300 -11 1841 239 47 48 chr17 3599653 3600012 -81838468 + L1M4c LINE L1 2449 2799 -3583 1525 35 29 0 chr17 3600012 3600186 -81838294 + SVA Other Other 1208 1386 0 1841 239 47 48 chr17 3600186 3600234 -81838246 + L1M4c LINE L1 2799 2846 -3536 461 213 21 0 chr17 3600235 3600329 -81838151 - AluJo SINE Alu -178 134 39 761 188 19 0 chr17 3600338 3600498 -81837982 + L1M4c LINE L1 2836 2998 -3384 728 208 39 0 chr17 3600506 3600636 -81837844 - AluJo SINE Alu -176 136 2 4289 209 37 40 chr17 3600637 3601449 -81837031 + L1M4c LINE L1 2987 3799 -2583 2064 112 0 4 chr17 3601449 3601727 -81836753 + AluSx SINE Alu 27 303 -9 4289 209 37 40 chr17 3601727 3601960 -81836520 + L1M4c LINE L1 3799 4031 -2351 2196 112 14 7 chr17 3601960 3602256 -81836224 - AluSx SINE Alu -14 298 1 4289 209 37 40 chr17 3602256 3602520 -81835960 + L1M4c LINE L1 4031 4294 -2088 761 186 54 143 chr17 3602621 3602796 -81835684 - MLT1F LTR MaLR -224 318 188 1975 162 0 0 chr17 3602796 3603086 -81835394 - AluJo SINE Alu -22 290 1 761 186 54 143 chr17 3603086 3603259 -81835221 - MLT1F LTR MaLR -354 188 1 603 264 16 36 chr17 3603269 3603462 -81835018 + L2 LINE L2 3114 3302 -11 213 39 0 0 chr17 3603497 3603523 -81834957 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 1557 170 4 43 chr17 3603595 3603872 -81834608 - AluJb SINE Alu -45 267 2 275 62 0 42 chr17 3603873 3603921 -81834559 + MER65A LTR ERV1 400 445 0 2143 117 0 52 chr17 3603974 3604298 -81834182 + AluSx SINE Alu 1 307 -5 422 131 31 46 chr17 3604298 3604428 -81834052 + GA-rich Low_complexity Low_complexity 1 128 0 390 267 89 5 chr17 3604619 3604835 -81833645 + L1M4 LINE L1 5191 5424 -738 251 175 0 32 chr17 3604851 3604914 -81833566 + GA-rich Low_complexity Low_complexity 3 63 0 2272 104 0 13 chr17 3604956 3605264 -81833216 + AluSx SINE Alu 1 304 -8 2218 96 27 7 chr17 3605541 3605842 -81832638 - AluSx SINE Alu -5 307 1 391 332 156 17 chr17 3606015 3606253 -81832227 + L2 LINE L2 2079 2349 -965 814 190 70 25 chr17 3606254 3606412 -81832068 + FRAM SINE Alu 1 161 -15 516 328 72 39 chr17 3606454 3606523 -81831957 + L2 LINE L2 2376 2441 -873 1851 141 56 0 chr17 3606523 3606807 -81831673 - AluSx SINE Alu -12 300 1 516 328 72 39 chr17 3606807 3606826 -81831654 + L2 LINE L2 2441 2458 -856 2198 113 7 0 chr17 3606826 3607127 -81831353 - AluSx SINE Alu -9 303 1 516 328 72 39 chr17 3607127 3607489 -81830991 + L2 LINE L2 2458 2847 -467 2452 86 3 0 chr17 3607489 3607790 -81830690 - AluSp SINE Alu -11 302 1 516 328 72 39 chr17 3607790 3607822 -81830658 + L2 LINE L2 2847 2876 -438 263 421 64 0 chr17 3607929 3608069 -81830411 + L2 LINE L2 3123 3271 -1 1039 174 0 0 chr17 3608077 3608238 -81830242 - AluSg/x SINE Alu -16 294 134 1743 154 79 101 chr17 3608238 3608672 -81829808 + L1MB7 LINE L1 5674 6116 -68 2514 74 0 0 chr17 3608672 3608969 -81829511 + AluY SINE Alu 1 297 -14 1741 164 14 3 chr17 3608979 3609272 -81829208 + AluSx SINE Alu 13 308 -4 1778 171 31 0 chr17 3609272 3609559 -81828921 + AluJb SINE Alu 1 296 -16 1743 154 79 101 chr17 3609559 3609617 -81828863 + L1MB7 LINE L1 6123 6167 -17 352 221 12 35 chr17 3609923 3610009 -81828471 + MIR SINE MIR 41 124 -84 2463 69 0 0 chr17 3610276 3610567 -81827913 + AluY SINE Alu 1 291 -20 370 100 29 43 chr17 3610851 3610921 -81827559 + L1MB7 LINE L1 5808 5876 -308 2408 80 3 3 chr17 3611866 3612166 -81826314 - AluSq SINE Alu -13 300 1 191 386 29 0 chr17 3613862 3613932 -81824548 - MIR SINE MIR -96 112 41 1227 91 5 32 chr17 3613942 3614129 -81824351 - L1PA11 LINE L1 0 6174 5993 2402 91 0 0 chr17 3614458 3614756 -81823724 + AluSx SINE Alu 1 298 -14 439 356 75 61 chr17 3615058 3615418 -81823062 - L2 LINE L2 -2 3270 2906 1122 254 135 21 chr17 3615445 3615875 -81822605 - MLT1J LTR MaLR -27 484 6 2379 70 13 7 chr17 3618040 3618338 -81820142 - AluY SINE Alu -11 300 1 197 327 0 0 chr17 3618492 3618547 -81819933 + L2 LINE L2 2716 2770 -544 323 331 18 10 chr17 3619078 3619207 -81819273 + MIR SINE MIR 18 141 -67 362 132 0 15 chr17 3619468 3619536 -81818944 + (GGGA)n Simple_repeat Simple_repeat 4 70 0 292 129 0 48 chr17 3619536 3619598 -81818882 + (GGAGAA)n Simple_repeat Simple_repeat 3 61 0 2293 109 0 0 chr17 3619955 3620249 -81818231 + AluSg SINE Alu 1 294 -16 300 270 81 0 chr17 3620335 3620483 -81817997 + L1ME4a LINE L1 5962 6121 0 360 297 12 36 chr17 3620882 3621047 -81817433 + MLT1K LTR MaLR 126 286 -302 494 215 25 0 chr17 3621118 3621239 -81817241 + MLT1K LTR MaLR 462 585 -3 992 193 6 0 chr17 3621725 3621891 -81816589 + FAM SINE Alu 1 167 -8 1000 184 54 97 chr17 3621955 3622145 -81816335 - L1M4 LINE L1 -914 5232 5036 2064 140 0 31 chr17 3622145 3622467 -81816013 - AluSx SINE Alu 0 312 1 1000 184 54 97 chr17 3622467 3622560 -81815920 - L1M4 LINE L1 -1110 5036 4962 2328 118 0 3 chr17 3622560 3622864 -81815616 - AluSx SINE Alu -9 303 1 1000 184 54 97 chr17 3622864 3622910 -81815570 - L1M4 LINE L1 -1184 4962 4916 427 307 101 46 chr17 3623420 3623638 -81814842 + MIR SINE MIR 2 231 -31 229 181 0 113 chr17 3625097 3625274 -81813206 + G-rich Low_complexity Low_complexity 2 158 0 2160 95 0 3 chr17 3625632 3625961 -81812519 + AluSx SINE Alu 1 328 0 1026 108 43 0 chr17 3626642 3626820 -81811660 - AluSp SINE Alu 0 324 141 1684 228 49 48 chr17 3626929 3627455 -81811025 - L1MC4 LINE L1 -276 7766 7240 819 241 66 0 chr17 3627462 3627674 -81810806 - L1MC4 LINE L1 -990 7052 6827 310 155 13 25 chr17 3627694 3627773 -81810707 - AluS SINE Alu -238 65 1 265 265 0 13 chr17 3627773 3627857 -81810623 - L1MC4 LINE L1 -1474 6530 6439 270 268 14 14 chr17 3628728 3628799 -81809681 + L2 LINE L2 3198 3268 -4 2242 103 7 0 chr17 3629277 3629567 -81808913 + AluSg SINE Alu 1 292 -18 281 311 92 0 chr17 3631358 3631477 -81807003 - MER117 DNA MER1_type -22 175 46 1804 177 0 13 chr17 3631584 3631883 -81806597 - AluJb SINE Alu -17 295 1 1758 180 9 25 chr17 3631942 3632259 -81806221 - AluJb SINE Alu 0 312 1 27 29 0 0 chr17 3632598 3632632 -81805848 + AT_rich Low_complexity Low_complexity 1 34 0 21 0 0 0 chr17 3632720 3632741 -81805739 + AT_rich Low_complexity Low_complexity 1 21 0 2157 117 3 13 chr17 3633589 3633898 -81804582 + AluSx SINE Alu 1 306 -6 1978 93 0 0 chr17 3634654 3634911 -81803569 - AluY SINE Alu 0 311 55 2442 93 0 0 chr17 3635673 3635975 -81802505 + AluSq SINE Alu 1 302 -11 1749 169 23 13 chr17 3635997 3636305 -81802175 + AluJo SINE Alu 1 311 -1 1039 188 66 89 chr17 3636984 3637079 -81801401 - LTR37A LTR ERV1 0 426 330 201 74 0 0 chr17 3637079 3637106 -81801374 + (TTCA)n Simple_repeat Simple_repeat 3 29 0 1511 168 24 71 chr17 3637106 3637256 -81801224 - AluJb SINE Alu -29 283 152 2189 102 3 16 chr17 3637256 3637559 -81800921 - AluSx SINE Alu -9 303 5 1511 168 24 71 chr17 3637559 3637705 -81800775 - AluJb SINE Alu -160 152 1 1039 188 66 89 chr17 3637705 3638002 -81800478 - LTR37A LTR ERV1 -94 332 42 222 37 0 0 chr17 3638014 3638041 -81800439 + (T)n Simple_repeat Simple_repeat 1 27 0 2428 70 30 0 chr17 3638237 3638539 -81799941 - AluY SINE Alu 0 311 1 1159 138 10 20 chr17 3638954 3639157 -81799323 - L1MA2 LINE L1 0 6304 6104 194 352 33 0 chr17 3639244 3639335 -81799145 - L2 LINE L2 -6 3266 3173 663 320 93 53 chr17 3640029 3641070 -81797410 - L2 LINE L2 -13 3259 2163 1769 163 7 29 chr17 3641070 3641377 -81797103 + AluJb SINE Alu 1 300 -12 663 320 93 53 chr17 3641377 3641641 -81796839 - L2 LINE L2 -1109 2163 1911 418 260 180 0 chr17 3641813 3641963 -81796517 - MER5A DNA MER1_type 0 189 13 213 315 56 0 chr17 3642006 3642095 -81796385 - L3 LINE CR1 -67 1510 1417 356 289 162 29 chr17 3642228 3642536 -81795944 - L3 LINE CR1 -555 1022 674 2143 107 0 32 chr17 3642911 3643219 -81795261 + AluSx SINE Alu 2 299 -13 2421 88 3 0 chr17 3643553 3643858 -81794622 - AluSp SINE Alu -7 306 1 2033 134 21 3 chr17 3643861 3644152 -81794328 - AluSx SINE Alu -15 297 2 186 311 107 80 chr17 3645040 3645265 -81793215 - L2 LINE L2 -97 3175 2945 1153 60 0 0 chr17 3645383 3645517 -81792963 - AluSq/x SINE Alu -179 134 1 216 271 19 84 chr17 3645550 3645657 -81792823 - MIR3 SINE MIR -1 207 108 2490 78 3 0 chr17 3646343 3646649 -81791831 + AluSp SINE Alu 1 307 -6 280 93 19 19 chr17 3646659 3646713 -81791767 + L1MB7 LINE L1 6130 6183 -1 1801 102 0 38 chr17 3646723 3646987 -81791493 + AluSx SINE Alu 58 311 -1 312 207 35 0 chr17 3647040 3647098 -81791382 + AluS SINE Alu 2 61 -239 2332 90 3 3 chr17 3647363 3647663 -81790817 - AluSx SINE Alu -12 300 1 2072 122 0 0 chr17 3647681 3647988 -81790492 - AluSx SINE Alu 0 309 3 625 256 84 0 chr17 3648368 3648559 -81789921 - MIR SINE MIR 0 262 56 2313 92 20 3 chr17 3648568 3648872 -81789608 - AluY SINE Alu -2 309 1 670 177 15 23 chr17 3648872 3649002 -81789478 - FLAM_A SINE Alu -4 129 1 219 158 0 0 chr17 3649003 3649041 -81789439 - MIR SINE MIR -71 191 154 283 85 0 0 chr17 3649149 3649196 -81789284 + Alu SINE Alu 255 301 0 2197 65 41 31 chr17 3649237 3649531 -81788949 - AluY SINE Alu -6 305 9 884 195 227 35 chr17 3650139 3650395 -81788085 + AluSx SINE Alu 1 305 -7 1405 181 89 14 chr17 3650399 3650506 -81787974 + AluJb SINE Alu 1 99 -213 2235 117 0 0 chr17 3650506 3650804 -81787676 + AluSq SINE Alu 3 300 -13 1405 181 89 14 chr17 3650804 3650978 -81787502 + AluJb SINE Alu 99 303 -9 1703 163 46 0 chr17 3651943 3652225 -81786255 - AluJo SINE Alu -17 295 1 355 273 40 66 chr17 3652303 3652501 -81785979 - HAL1b LINE L1 -916 432 240 260 278 204 6 chr17 3653045 3653207 -81785273 - MLT1K LTR MaLR -17 571 378 194 224 0 26 chr17 3653485 3653561 -81784919 + G-rich Low_complexity Low_complexity 3 76 0 180 228 0 0 chr17 3653625 3653682 -81784798 + G-rich Low_complexity Low_complexity 1 57 0 260 266 46 29 chr17 3653720 3653893 -81784587 + G-rich Low_complexity Low_complexity 3 178 0 1253 134 0 21 chr17 3653912 3654099 -81784381 - AluSx SINE Alu -129 183 1 2345 107 0 0 chr17 3654434 3654734 -81783746 - AluSx SINE Alu -10 302 3 388 289 139 66 chr17 3654846 3654893 -81783587 - HAL1 LINE L1 -590 1917 1875 2305 98 0 3 chr17 3654893 3655189 -81783291 - AluSc SINE Alu -14 295 1 388 289 139 66 chr17 3655189 3655629 -81782851 - HAL1 LINE L1 -632 1875 1394 1834 171 13 10 chr17 3655715 3656055 -81782425 + AluJo SINE Alu 1 341 0 2289 121 0 6 chr17 3656229 3656542 -81781938 - AluSx SINE Alu -1 311 1 335 167 0 39 chr17 3656872 3656950 -81781530 + L1ME4a LINE L1 6046 6120 -1 2216 100 10 3 chr17 3656997 3657296 -81781184 + AluSx SINE Alu 1 301 -11 2321 62 10 10 chr17 3659257 3659545 -81778935 + AluSg SINE Alu 1 288 -22 336 227 106 63 chr17 3659617 3659677 -81778803 + L1MC/D LINE L1 5198 5254 -984 1901 158 7 3 chr17 3659677 3659974 -81778506 - AluJb SINE Alu -14 298 1 336 227 106 63 chr17 3659974 3660164 -81778316 + L1MC/D LINE L1 5254 5472 -766 1527 153 3 130 chr17 3660455 3660590 -81777890 + AluJb SINE Alu 1 151 -161 512 103 11 0 chr17 3660590 3660677 -81777803 + L1PB1 LINE L1 6063 6150 -1 1527 153 3 130 chr17 3660677 3660888 -81777592 + AluJb SINE Alu 151 303 -9 239 148 37 19 chr17 3660925 3660979 -81777501 + (CATA)n Simple_repeat Simple_repeat 2 56 0 719 224 46 0 chr17 3661302 3661476 -81777004 + MER5A DNA MER1_type 2 183 -6 189 107 0 0 chr17 3661703 3661731 -81776749 + (A)n Simple_repeat Simple_repeat 1 28 0 2265 97 0 10 chr17 3661816 3662115 -81776365 - AluSq SINE Alu -17 296 1 1642 212 13 0 chr17 3663200 3663502 -81774978 - AluJb SINE Alu -6 306 1 2081 135 7 0 chr17 3663610 3663907 -81774573 - AluSx SINE Alu -13 299 1 399 230 0 11 chr17 3664412 3664499 -81773981 - MIR SINE MIR -175 87 2 2627 208 73 66 chr17 3664528 3664649 -81773831 - L1ME1 LINE L1 -8 6092 5973 2291 120 3 3 chr17 3664649 3664958 -81773522 + AluSx SINE Alu 2 310 -2 2627 208 73 66 chr17 3664958 3665734 -81772746 - L1ME1 LINE L1 -127 5973 5188 1910 239 131 23 chr17 3665743 3666603 -81771877 - L1ME1 LINE L1 -2045 4035 3083 1294 98 0 6 chr17 3666603 3666776 -81771704 - AluSg/x SINE Alu -11 301 130 345 220 184 48 chr17 3666776 3666944 -81771536 - L1ME1 LINE L1 -2993 3087 2897 862 175 6 38 chr17 3666946 3667106 -81771374 - AluJo SINE Alu -138 174 20 497 218 77 12 chr17 3667127 3667297 -81771183 - L1ME1 LINE L1 -3570 2510 2330 1678 174 14 7 chr17 3667304 3667592 -81770888 + AluJb SINE Alu 2 291 -21 369 243 26 53 chr17 3667647 3667799 -81770681 - L1ME1 LINE L1 -5882 188 41 2123 123 0 3 chr17 3667998 3668291 -81770189 - AluSx SINE Alu -20 292 1 21 0 0 0 chr17 3668298 3668319 -81770161 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr17 3668400 3668423 -81770057 + AT_rich Low_complexity Low_complexity 1 23 0 1847 58 9 0 chr17 3668924 3669148 -81769332 + AluY SINE Alu 82 307 -4 650 234 96 59 chr17 3670170 3670473 -81768007 - L1MC5 LINE L1 -47 7914 7601 1662 229 112 74 chr17 3670510 3671412 -81767068 - L1MC5 LINE L1 -471 7490 6542 204 382 88 23 chr17 3672406 3672729 -81765751 + L2 LINE L2 1700 2071 -1243 2323 39 0 0 chr17 3672729 3672989 -81765491 - AluY SINE Alu -11 300 41 204 382 88 23 chr17 3672989 3673189 -81765291 + L2 LINE L2 2071 2257 -1057 2016 94 56 3 chr17 3673189 3673477 -81765003 - AluSq SINE Alu -8 305 3 1995 188 105 20 chr17 3673676 3674172 -81764308 - L1MB7 LINE L1 -56 6128 5591 1386 167 0 70 chr17 3674206 3674493 -81763987 - AluJo SINE Alu -23 289 23 2028 87 38 11 chr17 3674800 3675087 -81763393 - AluSg1 SINE Alu -10 299 5 498 33 0 0 chr17 3675163 3675223 -81763257 + (TA)n Simple_repeat Simple_repeat 2 61 0 1364 198 32 12 chr17 3675225 3675478 -81763002 - AluJo SINE Alu -31 281 24 294 179 32 0 chr17 3675479 3675574 -81762906 + (TA)n Simple_repeat Simple_repeat 2 99 0 2102 129 3 3 chr17 3675575 3675878 -81762602 - AluSg SINE Alu -7 303 1 231 306 24 0 chr17 3675919 3676004 -81762476 - L1ME4a LINE L1 -67 6054 5968 204 135 0 0 chr17 3676006 3676043 -81762437 + (TG)n Simple_repeat Simple_repeat 1 37 0 333 182 0 80 chr17 3676223 3676244 -81762236 - L1ME4a LINE L1 -327 5794 5773 2342 86 7 13 chr17 3676244 3676547 -81761933 + AluSx SINE Alu 1 301 -11 333 182 0 80 chr17 3676547 3676613 -81761867 - L1ME4a LINE L1 -348 5773 5714 230 315 177 35 chr17 3678779 3679316 -81759164 + L2 LINE L2 2248 2860 -454 2137 104 3 7 chr17 3680069 3680368 -81758112 + AluY SINE Alu 1 298 -13 985 185 45 15 chr17 3680435 3680635 -81757845 + MER3 DNA MER1_type 1 206 -3 376 250 121 0 chr17 3680981 3681105 -81757375 - MIR SINE MIR -112 150 12 2197 103 20 3 chr17 3681107 3681409 -81757071 - AluSx SINE Alu -5 307 1 425 186 23 12 chr17 3681612 3681698 -81756782 - L2 LINE L2 -43 3270 3184 * 508 304 62 41 chr17 3681690 3682087 -81756393 - L2 LINE L2 -258 3055 2653 1957 160 3 7 chr17 3682162 3682469 -81756011 + AluJb SINE Alu 1 306 -6 21 0 0 0 chr17 3682774 3682795 -81755685 + AT_rich Low_complexity Low_complexity 1 21 0 1885 136 39 0 chr17 3683034 3683314 -81755166 + AluSx SINE Alu 1 291 -21 683 171 0 8 chr17 3683872 3683989 -81754491 + AluJo/FLAM SINE Alu 2 117 -195 539 158 158 36 chr17 3683984 3684123 -81754357 - AluSg/x SINE Alu -16 296 141 * 1717 154 0 0 chr17 3684130 3684389 -81754091 - AluSx SINE Alu -53 259 1 1104 123 0 0 chr17 3684423 3684578 -81753902 + AluJb SINE Alu 132 286 -26 219 88 0 0 chr17 3685291 3685325 -81753155 + (CACCC)n Simple_repeat Simple_repeat 3 36 0 2517 74 0 0 chr17 3686751 3687050 -81751430 + AluSx SINE Alu 1 299 -13 229 299 19 37 chr17 3687141 3687248 -81751232 - L2 LINE L2 -2673 641 537 793 172 31 0 chr17 3687264 3687392 -81751088 - FLAM_C SINE Alu -1 132 1 843 185 5 43 chr17 3687530 3687714 -81750766 + FRAM SINE Alu 1 172 -4 230 176 59 0 chr17 3688264 3688315 -81750165 + L2 LINE L2 3209 3262 -10 337 234 47 55 chr17 3688337 3688465 -81750015 + MIR3 SINE MIR 33 159 -49 2469 63 3 22 chr17 3688739 3689055 -81749425 - AluSg SINE Alu 0 310 1 191 257 124 9 chr17 3689516 3689621 -81748859 + MIR SINE MIR 16 132 -130 1212 108 11 17 chr17 3692226 3692402 -81746078 + FRAM SINE Alu 1 171 -5 859 201 39 44 chr17 3694473 3694677 -81743803 - MER3 DNA MER1_type -5 204 2 251 167 83 69 chr17 3695014 3695086 -81743394 - MIR SINE MIR -31 231 159 1641 176 27 10 chr17 3695173 3695468 -81743012 - AluJo SINE Alu -10 302 3 1703 58 24 0 chr17 3695820 3696028 -81742452 - AluY SINE Alu -19 292 80 2608 50 0 0 chr17 3696028 3696324 -81742156 - AluY SINE Alu -14 297 1 1223 183 114 19 chr17 3696598 3696861 -81741619 + AluJo SINE Alu 1 288 -24 376 88 0 18 chr17 3696885 3696942 -81741538 + Alu SINE Alu 238 293 -8 1420 124 139 23 chr17 3698027 3698286 -81740194 - AluSg SINE Alu -21 289 1 445 298 165 50 chr17 3698543 3698761 -81739719 - LTR16A LTR ERVL -7 443 201 795 196 266 32 chr17 3698906 3699218 -81739262 + MLT1F1 LTR MaLR 183 567 0 1799 128 60 0 chr17 3699745 3700027 -81738453 - AluSx SINE Alu -13 299 1 1360 128 50 5 chr17 3700161 3700379 -81738101 + MER30 DNA MER1_type 1 228 -2 2209 113 3 3 chr17 3700820 3701120 -81737360 + AluSq SINE Alu 1 300 -13 277 235 78 72 chr17 3701194 3701347 -81737133 + L1 LINE L1 4882 5035 -1111 874 168 7 7 chr17 3701456 3701611 -81736869 + AluSg/x SINE Alu 135 289 -21 369 0 0 0 chr17 3701613 3701654 -81736826 + (TA)n Simple_repeat Simple_repeat 2 42 0 2003 141 3 7 chr17 3701831 3702128 -81736352 - AluSx SINE Alu -14 298 3 1818 161 43 7 chr17 3702130 3702429 -81736051 - AluSx SINE Alu -2 310 1 2236 86 21 3 chr17 3702436 3702726 -81735754 - AluSq SINE Alu -18 295 1 400 251 104 32 chr17 3702732 3703117 -81735363 + L1ME3A LINE L1 5521 5940 -230 522 69 14 0 chr17 3703566 3703638 -81734842 - U3 snRNA snRNA -144 73 1 2235 128 0 0 chr17 3703864 3704176 -81734304 - AluSx SINE Alu 0 312 1 1816 134 40 0 chr17 3705024 3705300 -81733180 + AluSg SINE Alu 1 287 -23 254 319 11 0 chr17 3705487 3705578 -81732902 + GA-rich Low_complexity Low_complexity 4 95 0 2144 114 0 20 chr17 3705662 3705968 -81732512 + AluSx SINE Alu 1 300 -12 26 30 0 0 chr17 3706049 3706082 -81732398 + AT_rich Low_complexity Low_complexity 1 33 0 2251 128 0 7 chr17 3706110 3706414 -81732066 + AluSx SINE Alu 1 302 -10 397 306 0 0 chr17 3706790 3706914 -81731566 + G-rich Low_complexity Low_complexity 1 124 0 384 249 0 0 chr17 3706926 3707091 -81731389 + G-rich Low_complexity Low_complexity 1 165 0 351 167 0 0 chr17 3707125 3707215 -81731265 + G-rich Low_complexity Low_complexity 1 90 0 1458 98 0 0 chr17 3707255 3707439 -81731041 + AluSg/x SINE Alu 116 299 -13 22 0 0 0 chr17 3707537 3707559 -81730921 + AT_rich Low_complexity Low_complexity 1 22 0 1118 208 64 13 chr17 3707744 3707980 -81730500 - MLT1F1 LTR MaLR -307 260 13 615 248 30 0 chr17 3708020 3708153 -81730327 - MER119 DNA MER1_type -391 192 56 421 167 175 0 chr17 3708639 3708753 -81729727 - L1MA9 LINE L1 -10 6302 6169 1437 204 87 63 chr17 3708795 3709212 -81729268 - L1MC4a LINE L1 0 7808 7377 1748 175 24 0 chr17 3709212 3709503 -81728977 + AluJo SINE Alu 1 298 -14 1437 204 87 63 chr17 3709503 3709546 -81728934 - L1MC4a LINE L1 -431 7377 7337 1810 174 26 10 chr17 3709658 3709962 -81728518 + AluJb SINE Alu 1 309 -3 220 295 77 0 chr17 3710014 3710092 -81728388 + L2 LINE L2 3191 3274 -39 199 396 20 41 chr17 3711619 3711816 -81726664 + L2 LINE L2 2992 3184 -88 1686 141 46 89 chr17 3711921 3712268 -81726212 + MER7A DNA MER2_type 1 330 -16 1615 167 33 46 chr17 3712501 3712807 -81725673 - AluJo SINE Alu -10 302 1 478 239 23 6 chr17 3712814 3712942 -81725538 - L1MA9 LINE L1 0 6291 6167 2329 108 7 0 chr17 3713059 3713364 -81725116 + AluSx SINE Alu 1 307 -5 2134 122 7 0 chr17 3714856 3715151 -81723329 + AluSg SINE Alu 1 297 -13 26 30 0 0 chr17 3715485 3715518 -81722962 + AT_rich Low_complexity Low_complexity 1 33 0 627 104 144 80 chr17 3716043 3716168 -81722312 + FLAM_C SINE Alu 1 133 0 2053 116 37 7 chr17 3716470 3716764 -81721716 - AluSp SINE Alu -10 303 1 2082 125 7 0 chr17 3716767 3717056 -81721424 - AluSx SINE Alu -21 291 1 1978 111 17 10 chr17 3717547 3717835 -81720645 - AluSg SINE Alu -20 290 1 441 270 146 74 chr17 3718210 3718643 -81719837 + L1MC4 LINE L1 7579 8042 0 1944 72 0 0 chr17 3718723 3718959 -81719521 - AluY SINE Alu -75 236 1 303 242 53 45 chr17 3718962 3719094 -81719386 - L1M1 LINE L1 -4139 3426 3294 938 149 24 0 chr17 3719154 3719322 -81719158 + L1MA8 LINE L1 6092 6263 -28 938 189 12 0 chr17 3719324 3719488 -81718992 + FRAM SINE Alu 1 163 -13 285 183 0 0 chr17 3719538 3719598 -81718882 + (CATA)n Simple_repeat Simple_repeat 2 61 0 1628 182 0 30 chr17 3720917 3721214 -81717266 - AluJb SINE Alu -24 288 1 334 148 0 33 chr17 3721216 3721277 -81717203 - FLAM_A SINE Alu 0 133 75 282 253 32 32 chr17 3721307 3721402 -81717078 - L2 LINE L2 -11 3302 3208 2138 117 7 0 chr17 3721512 3721810 -81716670 + AluSx SINE Alu 1 300 -12 190 176 40 135 chr17 3722168 3722210 -81716270 - L2 LINE L2 -60 3253 3219 2146 124 0 0 chr17 3722210 3722508 -81715972 + AluY SINE Alu 1 298 -13 190 176 40 135 chr17 3722508 3722539 -81715941 - L2 LINE L2 -94 3219 3187 723 162 0 63 chr17 3723013 3723155 -81715325 + FLAM_C SINE Alu 1 133 0 2136 104 0 4 chr17 3723454 3723768 -81714712 - AluSc SINE Alu 0 313 1 670 177 15 23 chr17 3723768 3723898 -81714582 - FLAM_A SINE Alu -4 129 1 596 258 16 27 chr17 3723899 3724085 -81714395 - MIR SINE MIR -71 191 8 2183 134 0 0 chr17 3724335 3724633 -81713847 - AluSx SINE Alu -14 298 1 25 0 0 0 chr17 3724652 3724677 -81713803 + AT_rich Low_complexity Low_complexity 1 25 0 1321 182 22 85 chr17 3725588 3725906 -81712574 - AluJo SINE Alu -14 298 1 488 179 8 60 chr17 3725911 3726028 -81712452 - FLAM_A SINE Alu -13 129 19 931 114 0 8 chr17 3726032 3726164 -81712316 + AluJb SINE Alu 171 301 -11 2050 133 13 0 chr17 3726169 3726471 -81712009 + AluSg SINE Alu 1 306 -4 1979 137 3 13 chr17 3727232 3727545 -81710935 + AluJb SINE Alu 1 310 -2 200 318 123 26 chr17 3727566 3727761 -81710719 + L2 LINE L2 2083 2296 -1018 310 291 250 15 chr17 3728139 3728335 -81710145 + MIR SINE MIR 21 262 0 677 228 59 41 chr17 3728406 3728552 -81709928 + MIR SINE MIR 21 174 -88 2235 129 0 15 chr17 3728552 3728894 -81709586 + MER1B DNA MER1_type 1 337 0 677 228 59 41 chr17 3728894 3728966 -81709514 + MIR SINE MIR 174 243 -19 307 54 0 0 chr17 3729078 3729115 -81709365 + AluSp SINE Alu 132 168 -135 421 123 0 0 chr17 3729115 3729172 -81709308 + AluS SINE Alu 232 288 -24 1061 146 113 17 chr17 3729564 3729803 -81708677 - MER58B DNA MER1_type 0 341 80 225 232 24 110 chr17 3729845 3729927 -81708553 - MER58B DNA MER1_type -251 90 16 1060 186 15 51 chr17 3730801 3731075 -81707405 + L1ME1 LINE L1 4382 4645 -1501 1393 163 135 0 chr17 3731075 3731320 -81707160 - AluJo SINE Alu -17 295 18 1079 233 103 21 chr17 3731333 3731711 -81706769 + L1ME1 LINE L1 4634 5042 -1104 878 136 45 32 chr17 3731720 3731875 -81706605 + FAM SINE Alu 1 46 -3 3255 193 101 43 chr17 3731920 3732175 -81706305 + L1ME1 LINE L1 4980 5219 -947 2122 111 4 0 chr17 3732175 3732455 -81706025 + AluSx SINE Alu 21 301 -11 3255 193 101 43 chr17 3732455 3732687 -81705793 + L1ME1 LINE L1 5219 5436 -730 1610 172 62 10 chr17 3732687 3732978 -81705502 + AluJo SINE Alu 1 306 -6 3255 193 101 43 chr17 3732978 3733397 -81705083 + L1ME1 LINE L1 5436 5963 -203 1771 84 0 4 chr17 3733397 3733646 -81704834 + AluSx SINE Alu 58 305 0 3255 193 101 43 chr17 3733646 3733858 -81704622 + L1ME1 LINE L1 5963 6161 -5 1406 217 73 63 chr17 3734258 3734426 -81704054 + MLT1D LTR MaLR 3 168 -337 2445 81 3 0 chr17 3734426 3734734 -81703746 + AluY SINE Alu 1 309 -2 1406 217 73 63 chr17 3734734 3735059 -81703421 + MLT1D LTR MaLR 168 501 -4 225 321 0 0 chr17 3735310 3735363 -81703117 - MIR SINE MIR -155 107 55 2034 116 7 14 chr17 3735658 3735951 -81702529 - AluSq SINE Alu -22 291 1 2363 99 0 3 chr17 3736214 3736517 -81701963 - AluSg SINE Alu -8 302 1 264 200 42 13 chr17 3736645 3736724 -81701756 - L1ME LINE L1 -557 5564 5500 2091 46 81 0 chr17 3737041 3737301 -81701179 + AluSx SINE Alu 21 301 -11 3481 169 23 73 chr17 3737924 3738709 -81699771 - L1MB8 LINE L1 -5 6173 5428 2345 100 3 0 chr17 3739102 3739441 -81699039 + AluSx SINE Alu 1 340 0 1763 142 46 14 chr17 3739597 3739879 -81698601 + AluJb SINE Alu 1 291 -21 351 202 0 0 chr17 3739903 3739987 -81698493 + GA-rich Low_complexity Low_complexity 3 86 0 219 265 0 20 chr17 3740018 3740067 -81698413 - MIR SINE MIR -164 98 51 823 248 48 41 chr17 3740067 3740337 -81698143 + HsTC2c DNA Tc2 457 728 -1 432 175 38 0 chr17 3740753 3740833 -81697647 - LTR32 LTR ERVL -77 394 312 1945 134 31 0 chr17 3741230 3741521 -81696959 - AluSx SINE Alu -12 300 1 236 358 29 3 chr17 3742037 3742222 -81696258 + L2 LINE L2 2712 2955 -317 184 250 235 0 chr17 3742266 3742334 -81696146 - L2 LINE L2 -1 3312 3229 354 231 51 0 chr17 3742356 3742434 -81696046 + MER3 DNA MER1_type 1 82 -127 293 315 176 13 chr17 3742597 3742835 -81695645 + L2 LINE L2 2921 3197 -116 296 262 87 33 chr17 3742893 3743076 -81695404 - L2 LINE L2 -1 3312 3120 694 183 95 53 chr17 3743146 3743315 -81695165 + FRAM SINE Alu 1 40 0 254 262 182 27 chr17 3744019 3744206 -81694274 - MER112 DNA MER1_type -42 218 3 1111 162 0 0 chr17 3744209 3744382 -81694098 + AluSg/x SINE Alu 126 298 -14 1917 99 4 11 chr17 3744780 3745052 -81693428 - AluSg SINE Alu 0 310 41 2213 123 0 0 chr17 3745228 3745537 -81692943 + AluSx SINE Alu 1 309 -3 1701 105 9 4 chr17 3745650 3745879 -81692601 + AluSq SINE Alu 1 230 -83 346 257 50 30 chr17 3748459 3748560 -81689920 - MIR SINE MIR -155 107 5 1341 177 117 11 chr17 3748993 3749259 -81689221 - AluJb SINE Alu -14 298 5 1919 96 82 11 chr17 3749921 3750201 -81688279 - AluSp SINE Alu -13 300 1 2352 88 3 0 chr17 3750512 3750809 -81687671 - AluSx SINE Alu -14 298 1 1636 101 9 9 chr17 3751237 3751456 -81687024 - AluSq SINE Alu -94 219 1 2299 110 0 0 chr17 3751618 3751917 -81686563 - AluSg SINE Alu -11 299 1 282 255 158 9 chr17 3752340 3752484 -81685996 - MER5A DNA MER1_type -16 162 8 366 162 0 0 chr17 3752971 3753039 -81685441 - L1MA10 LINE L1 -2 6332 6265 2234 101 3 0 chr17 3753039 3753327 -81685153 + AluSp SINE Alu 1 289 -24 1188 155 0 0 chr17 3753332 3753506 -81684974 + AluSg/x SINE Alu 123 296 -16 2016 147 3 3 chr17 3753944 3754244 -81684236 + AluSx SINE Alu 1 300 -12 192 336 75 94 chr17 3755472 3755737 -81682743 - L2 LINE L2 -417 2897 2638 3369 188 26 39 chr17 3806249 3806370 -81632110 - L1MB7 LINE L1 -8 6176 6055 2255 114 0 0 chr17 3806370 3806668 -81631812 + AluSx SINE Alu 1 298 -14 3369 188 26 39 chr17 3806668 3806848 -81631632 - L1MB7 LINE L1 -129 6055 5874 2274 107 7 0 chr17 3806848 3807146 -81631334 + AluSx SINE Alu 1 300 -12 3369 188 26 39 chr17 3807146 3807646 -81630834 - L1MB7 LINE L1 -310 5874 5384 2179 90 0 17 chr17 3807665 3807955 -81630525 + AluSg1 SINE Alu 1 285 -24 1817 125 23 15 chr17 3808100 3808364 -81630116 - AluJb SINE Alu -46 266 1 297 217 56 133 chr17 3808624 3808745 -81629735 + MER58C DNA MER1_type 1 111 -104 2510 77 3 0 chr17 3808745 3809056 -81629424 + AluSp SINE Alu 1 312 -1 297 217 56 133 chr17 3809056 3809077 -81629403 + MER58C DNA MER1_type 111 132 -83 274 137 27 41 chr17 3810320 3810393 -81628087 + (CGGGG)n Simple_repeat Simple_repeat 2 73 0 343 308 34 0 chr17 3810954 3811071 -81627409 - MIR SINE MIR -1 261 141 1736 118 77 83 chr17 3811071 3811384 -81627096 - AluSx SINE Alu -1 311 1 801 185 7 0 chr17 3811385 3811520 -81626960 - AluSq/x SINE Alu -176 136 1 342 309 12 0 chr17 3811520 3811604 -81626876 - MIR SINE MIR -115 147 63 1584 96 9 9 chr17 3812106 3812335 -81626145 - AluSq SINE Alu -84 229 1 31 0 0 0 chr17 3814518 3814549 -81623931 + GC_rich Low_complexity Low_complexity 1 31 0 22 0 0 0 chr17 3815006 3815028 -81623452 + GC_rich Low_complexity Low_complexity 1 22 0 945 137 37 19 chr17 3815463 3815624 -81622856 - AluJo SINE Alu -41 271 108 2330 92 3 0 chr17 3815633 3815936 -81622544 + AluSx SINE Alu 5 308 -4 1314 85 11 26 chr17 3815938 3816127 -81622353 + AluY SINE Alu 126 311 0 1135 116 18 0 chr17 3816390 3816554 -81621926 - AluSq SINE Alu -68 245 79 853 193 0 0 chr17 3817134 3817274 -81621206 - FLAM_C SINE Alu -3 140 1 2240 89 7 7 chr17 3817472 3817786 -81620694 - AluSp SINE Alu 0 314 1 2242 124 7 0 chr17 3818060 3818358 -81620122 - AluSx SINE Alu -12 300 1 667 169 0 17 chr17 3818449 3818567 -81619913 + FLAM_C SINE Alu 2 117 -26 2553 57 0 0 chr17 3818680 3818976 -81619504 - AluY SINE Alu -15 296 1 720 165 0 0 chr17 3819240 3819355 -81619125 - AluSc SINE Alu -52 257 143 1414 264 41 2 chr17 3819501 3819937 -81618543 + L2 LINE L2 2262 2714 -600 633 197 39 0 chr17 3819937 3820064 -81618416 + FLAM_C SINE Alu 2 133 0 2119 209 43 16 chr17 3820064 3820691 -81617789 + L1M4 LINE L1 3126 3769 -2377 2174 82 0 38 chr17 3820693 3821164 -81617316 + AluY SINE Alu 1 460 0 480 164 27 0 chr17 3821179 3821289 -81617191 + GA-rich Low_complexity Low_complexity 1 113 0 1393 115 6 0 chr17 3821419 3821602 -81616878 - AluSx SINE Alu -128 184 1 2233 103 3 3 chr17 3821602 3821904 -81616576 - AluSx SINE Alu -5 307 6 1895 132 24 14 chr17 3821911 3822207 -81616273 - AluSx SINE Alu -13 299 1 397 281 150 22 chr17 3822210 3822523 -81615957 + L2 LINE L2 524 876 -2438 2208 114 0 26 chr17 3822523 3822829 -81615651 - AluSg SINE Alu -7 303 6 2282 106 6 3 chr17 3822856 3823168 -81615312 - AluSq SINE Alu 0 313 1 2223 83 30 17 chr17 3823323 3823623 -81614857 + AluSc SINE Alu 1 304 -5 192 40 0 0 chr17 3824164 3824189 -81614291 + (TAA)n Simple_repeat Simple_repeat 1 25 0 1162 106 5 96 chr17 3824337 3824563 -81613917 + AluSg/x SINE Alu 117 324 0 234 128 0 0 chr17 3824811 3824850 -81613630 + (CTCA)n Simple_repeat Simple_repeat 1 39 0 1306 88 0 0 chr17 3824863 3825033 -81613447 + AluSg/x SINE Alu 137 306 -6 186 362 39 16 chr17 3825069 3825196 -81613284 - L2 LINE L2 -2 3311 3182 766 181 44 111 chr17 3825448 3825718 -81612762 + AluJb SINE Alu 61 312 0 1381 105 0 0 chr17 3826497 3826669 -81611811 + AluSq SINE Alu 36 207 -106 1913 137 26 7 chr17 3827789 3828095 -81610385 + AluSq SINE Alu 1 312 -1 788 103 26 0 chr17 3828349 3828465 -81610015 - LTR8 LTR ERV1 0 691 573 2030 125 26 20 chr17 3828465 3828769 -81609711 - AluSq SINE Alu -6 307 2 1228 206 112 55 chr17 3828811 3828863 -81609617 + MLT1D LTR MaLR 1 49 -456 3156 135 6 21 chr17 3828863 3829398 -81609082 + MER1A DNA MER1_type 1 527 0 1228 206 112 55 chr17 3829398 3829747 -81608733 + MLT1D LTR MaLR 49 425 -80 2231 99 6 29 chr17 3829777 3830091 -81608389 - AluSq SINE Alu -6 307 1 2207 116 0 13 chr17 3830129 3830431 -81608049 - AluSx SINE Alu -14 298 1 1576 157 74 68 chr17 3830502 3830546 -81607934 + MSTD LTR MaLR 1 43 -353 2337 114 0 0 chr17 3830546 3830845 -81607635 - AluSq SINE Alu -12 301 3 1576 157 74 68 chr17 3830845 3831194 -81607286 + MSTD LTR MaLR 43 396 0 2311 107 7 0 chr17 3831220 3831519 -81606961 + AluSx SINE Alu 1 301 -11 366 133 17 0 chr17 3831521 3831581 -81606899 + AluJ/FLAM SINE Alu 1 61 -241 1711 167 38 0 chr17 3831727 3831991 -81606489 - AluJb SINE Alu -22 290 17 1008 187 45 107 chr17 3831991 3832105 -81606375 - L1MC5 LINE L1 -306 7655 7535 2504 73 3 0 chr17 3832105 3832407 -81606073 + AluSp SINE Alu 1 303 -10 1008 187 45 107 chr17 3832407 3832554 -81605926 - L1MC5 LINE L1 -426 7535 7431 2349 100 7 3 chr17 3832554 3832864 -81605616 + AluSq SINE Alu 1 311 -2 1008 187 45 107 chr17 3832864 3833050 -81605430 - L1MC5 LINE L1 -530 7431 7235 1381 167 4 4 chr17 3833069 3833297 -81605183 - AluJb SINE Alu 0 312 85 2324 93 7 0 chr17 3833354 3833654 -81604826 - AluSx SINE Alu -10 302 1 338 256 143 30 chr17 3833654 3833787 -81604693 + LTR67 LTR ERVL 28 175 -382 2189 121 13 0 chr17 3833847 3834153 -81604327 - AluY SINE Alu -1 310 1 644 256 18 0 chr17 3834265 3834429 -81604051 + LTR67 LTR ERVL 384 550 -7 1293 68 6 12 chr17 3834561 3834724 -81603756 - AluSq SINE Alu -151 162 1 228 273 98 35 chr17 3834830 3834973 -81603507 - L1ME LINE L1 -202 5919 5768 2421 81 3 0 chr17 3834982 3835277 -81603203 - AluSp SINE Alu -17 296 1 263 200 53 40 chr17 3835277 3835352 -81603128 - L1ME LINE L1 -2021 5787 5712 1102 176 20 39 chr17 3835367 3835411 -81603069 - L1MB3 LINE L1 0 6183 6140 2218 114 0 10 chr17 3835411 3835574 -81602906 - AluSx SINE Alu -16 296 136 2400 78 7 13 chr17 3835574 3835880 -81602600 - AluY SINE Alu -7 304 1 2218 114 0 10 chr17 3835880 3836015 -81602465 - AluSx SINE Alu -176 136 1 1102 176 20 39 chr17 3836015 3836225 -81602255 - L1MB3 LINE L1 -43 6140 5934 1674 176 4 7 chr17 3836226 3836505 -81601975 + AluJb SINE Alu 3 280 -32 260 51 0 26 chr17 3836509 3836548 -81601932 + (TAAA)n Simple_repeat Simple_repeat 4 41 0 2422 93 0 3 chr17 3836548 3836858 -81601622 + AluSx SINE Alu 1 309 -3 23 0 0 0 chr17 3836858 3836881 -81601599 + AT_rich Low_complexity Low_complexity 1 23 0 368 194 11 43 chr17 3836881 3836974 -81601506 - L1MB3 LINE L1 -232 5948 5859 307 107 0 0 chr17 3836974 3837030 -81601450 - Alu SINE Alu 0 302 247 386 232 20 10 chr17 3837179 3837278 -81601202 - MLT1L LTR MaLR -108 507 408 1322 238 100 26 chr17 3837284 3837635 -81600845 - MLT1F LTR MaLR -4 538 150 2294 121 0 0 chr17 3837635 3837941 -81600539 - AluSx SINE Alu -6 306 1 1322 238 100 26 chr17 3837941 3838009 -81600471 - MLT1F LTR MaLR -392 150 88 2305 109 0 6 chr17 3838131 3838442 -81600038 - AluSq SINE Alu -4 309 1 249 326 22 0 chr17 3838534 3838626 -81599854 - MLT1L LTR MaLR -319 296 203 1958 130 27 0 chr17 3838720 3839013 -81599467 + AluSg SINE Alu 1 301 -9 346 242 97 32 chr17 3839090 3839214 -81599266 + L1ME4a LINE L1 5936 6067 -54 2322 110 0 0 chr17 3839302 3839601 -81598879 + AluSg SINE Alu 1 299 -11 420 319 137 21 chr17 3839601 3840024 -81598456 - L2 LINE L2 -648 2666 2195 809 176 8 0 chr17 3840028 3840181 -81598299 + FLAM_C SINE Alu 2 155 0 26 0 0 0 chr17 3840264 3840290 -81598190 + AT_rich Low_complexity Low_complexity 1 26 0 277 256 12 23 chr17 3840649 3840735 -81597745 + CT-rich Low_complexity Low_complexity 2 86 0 2440 84 0 0 chr17 3840847 3841143 -81597337 + AluSg SINE Alu 1 296 -14 1259 109 0 0 chr17 3841143 3841308 -81597172 + AluSg/x SINE Alu 132 296 -13 2415 100 0 0 chr17 3841319 3841630 -81596850 + AluY SINE Alu 1 311 0 2397 109 0 3 chr17 3841661 3841973 -81596507 + AluSq SINE Alu 1 311 -2 2253 116 0 0 chr17 3842105 3842406 -81596074 + AluSx SINE Alu 5 305 -7 2150 97 47 3 chr17 3842427 3842727 -81595753 + AluSp SINE Alu 1 313 0 1810 171 0 10 chr17 3842846 3843144 -81595336 + AluJo SINE Alu 15 309 -3 383 252 89 44 chr17 3843182 3843317 -81595163 - MIR SINE MIR -13 249 109 182 263 84 53 chr17 3844040 3844135 -81594345 + MIR SINE MIR 164 261 -1 353 311 53 29 chr17 3844347 3844553 -81593927 - L1M4 LINE L1 -2693 3453 3243 2260 102 0 7 chr17 3844585 3844888 -81593592 - AluSc SINE Alu -8 301 1 2448 99 0 0 chr17 3845094 3845407 -81593073 - AluSq SINE Alu 0 313 1 815 218 62 6 chr17 3845417 3845596 -81592884 - AluJb SINE Alu 0 312 124 1519 123 20 0 chr17 3846034 3846238 -81592242 + AluSg/x SINE Alu 83 290 -20 319 271 98 53 chr17 3846238 3846371 -81592109 - L1M4 LINE L1 -3652 2494 2356 269 143 0 32 chr17 3846573 3846636 -81591844 + (TTTC)n Simple_repeat Simple_repeat 1 61 0 646 186 9 0 chr17 3846651 3846944 -81591536 - FLAM_A SINE Alu 0 294 1 236 304 98 64 chr17 3847161 3847457 -81591023 + L2 LINE L2 2966 3271 -1 1657 222 19 91 chr17 3847484 3847557 -81590923 - L2 LINE L2 0 3313 3236 2127 113 0 3 chr17 3847557 3847860 -81590620 + AluSx SINE Alu 1 302 0 1657 222 19 91 chr17 3847860 3848388 -81590092 - L2 LINE L2 -77 3236 2758 741 317 94 39 chr17 3848601 3848964 -81589516 + L2 LINE L2 558 962 -2352 2303 95 0 13 chr17 3848964 3849268 -81589212 - AluSc SINE Alu -9 300 1 741 317 94 39 chr17 3849268 3849446 -81589034 + L2 LINE L2 962 1129 -2185 612 324 76 42 chr17 3849471 3849620 -81588860 - L2 LINE L2 0 3313 3171 1924 116 98 0 chr17 3849620 3849897 -81588583 + AluSx SINE Alu 1 304 -8 612 324 76 42 chr17 3849897 3849918 -81588562 - L2 LINE L2 -142 3171 3152 1640 191 0 23 chr17 3849918 3850053 -81588427 + AluJb SINE Alu 4 141 -171 2373 97 0 0 chr17 3850053 3850353 -81588127 + AluSq SINE Alu 3 302 -11 1640 191 0 23 chr17 3850353 3850520 -81587960 + AluJb SINE Alu 141 299 -13 612 324 76 42 chr17 3850520 3850728 -81587752 - L2 LINE L2 -161 3152 2921 696 162 0 0 chr17 3850786 3850891 -81587589 + FLAM_C SINE Alu 5 109 -34 51 0 0 0 chr17 3850934 3850985 -81587495 + AT_rich Low_complexity Low_complexity 1 51 0 599 329 63 77 chr17 3850988 3851170 -81587310 - L2 LINE L2 -416 2898 2715 2216 128 0 3 chr17 3851170 3851474 -81587006 - AluSx SINE Alu -5 307 5 599 329 63 77 chr17 3851474 3851486 -81586994 - L2 LINE L2 -599 2715 2704 2001 68 89 48 chr17 3851486 3851779 -81586701 - AluY SINE Alu -6 305 1 2033 129 31 0 chr17 3851780 3852066 -81586414 - AluSc SINE Alu -14 295 1 599 329 63 77 chr17 3852066 3852114 -81586366 - L2 LINE L2 -610 2704 2657 937 118 0 22 chr17 3852114 3852250 -81586230 + FLAM_C SINE Alu 1 133 0 599 329 63 77 chr17 3852250 3852683 -81585797 - L2 LINE L2 -657 2657 2228 1255 155 4 52 chr17 3852738 3852970 -81585510 + AluJo SINE Alu 86 306 -6 2238 125 3 0 chr17 3852972 3853283 -81585197 + AluSx SINE Alu 1 312 0 2454 90 0 0 chr17 3853286 3853598 -81584882 + AluSx SINE Alu 1 312 0 830 318 48 3 chr17 3853613 3853946 -81584534 - L2 LINE L2 -1161 2153 1806 1435 285 95 36 chr17 3853959 3854644 -81583836 - L2 LINE L2 -2066 1248 524 1913 126 48 3 chr17 3854647 3854940 -81583540 + AluSx SINE Alu 1 306 -6 402 217 12 0 chr17 3854945 3855028 -81583452 - BC200 scRNA scRNA -114 86 3 452 120 0 0 chr17 3855036 3855111 -81583369 - Alu SINE Alu -3 309 235 322 158 18 0 chr17 3855211 3855268 -81583212 + AluSp SINE Alu 125 182 -121 804 209 19 0 chr17 3855281 3855439 -81583041 - AluJo/FRAM SINE Alu -5 297 137 1305 172 32 48 chr17 3855442 3855692 -81582788 - AluJb SINE Alu -19 293 48 1187 147 0 0 chr17 3856407 3856577 -81581903 + AluSg/x SINE Alu 137 306 -6 2164 76 10 53 chr17 3856580 3856884 -81581596 + AluSc SINE Alu 1 291 -18 189 0 0 0 chr17 3856904 3856925 -81581555 + (TG)n Simple_repeat Simple_repeat 2 22 0 2250 96 0 17 chr17 3857127 3857451 -81581029 - AluY SINE Alu 0 311 1 1060 104 7 0 chr17 3857451 3857595 -81580885 - AluSq/x SINE Alu -167 145 1 909 192 0 0 chr17 3857994 3858150 -81580330 + FRAM SINE Alu 1 156 -20 759 113 96 0 chr17 3858287 3858402 -81580078 - AluSq/x SINE Alu -186 127 2 475 209 55 0 chr17 3859086 3859196 -81579284 - L1MC3 LINE L1 0 7785 7670 1654 112 0 0 chr17 3859240 3859454 -81579026 - AluSg SINE Alu -81 229 16 184 100 0 0 chr17 3860272 3860302 -81578178 + L2 LINE L2 2759 2788 -526 2179 127 3 10 chr17 3860461 3860775 -81577705 - AluSx SINE Alu 0 312 1 1685 139 79 7 chr17 3860779 3861082 -81577398 + Tigger1 DNA MER2_type 182 506 -1912 1143 157 0 0 chr17 3861103 3861269 -81577211 + FRAM SINE Alu 1 158 -18 2857 16 0 0 chr17 3861271 3861579 -81576901 + AluYa5 SINE Alu 1 308 -3 2082 148 3 0 chr17 3861581 3861885 -81576595 + AluSg SINE Alu 1 305 -5 1120 75 0 0 chr17 3861906 3862040 -81576440 + AluSg SINE Alu 1 134 -176 1971 109 4 0 chr17 3862040 3862297 -81576183 + AluSg SINE Alu 1 258 -52 2486 62 7 3 chr17 3862563 3862869 -81575611 + AluY SINE Alu 3 309 -2 1369 124 0 0 chr17 3862869 3863062 -81575418 + AluSg SINE Alu 118 310 0 1247 139 6 0 chr17 3863089 3863262 -81575218 + AluSg SINE Alu 6 179 -131 2005 126 0 0 chr17 3863398 3863668 -81574812 + AluSq SINE Alu 27 296 -17 391 273 70 98 chr17 3863671 3864034 -81574446 - L1MC4 LINE L1 -153 6703 5665 208 257 29 0 chr17 3864579 3864649 -81573831 + GA-rich Low_complexity Low_complexity 1 72 0 1194 122 74 0 chr17 3865271 3865439 -81573041 - AluSp SINE Alu 0 313 126 1763 146 7 17 chr17 3865439 3865733 -81572747 - AluSx SINE Alu -21 291 1 1194 122 74 0 chr17 3865733 3865779 -81572701 - AluSp SINE Alu -187 126 85 958 180 23 6 chr17 3865801 3865839 -81572641 - AluJo SINE Alu -137 175 139 2539 67 0 0 chr17 3865839 3866136 -81572344 - AluSx SINE Alu -15 297 1 958 180 23 6 chr17 3866136 3866269 -81572211 - AluJo SINE Alu -173 139 1 1613 199 3 7 chr17 3866351 3866643 -81571837 + AluJo SINE Alu 16 306 -6 2061 104 0 17 chr17 3866647 3866983 -81571497 + AluSq SINE Alu 1 331 0 345 255 120 32 chr17 3867187 3867403 -81571077 + L1MCa LINE L1 2469 2703 -3723 689 161 36 0 chr17 3867422 3867534 -81570946 + FLAM_A SINE Alu 1 116 -17 317 205 12 36 chr17 3867619 3867702 -81570778 + L1M4 LINE L1 5192 5272 -874 1596 183 47 9 chr17 3867848 3868192 -81570288 - L1M4 LINE L1 -1895 4251 3895 1046 160 28 0 chr17 3868196 3868377 -81570103 - AluSg/x SINE Alu -5 305 120 367 220 0 55 chr17 3868378 3868469 -81570011 - L1M4 LINE L1 -2277 3869 3784 2374 107 0 3 chr17 3868471 3868780 -81569700 - AluSx SINE Alu -4 308 1 2282 116 3 0 chr17 3868791 3869094 -81569386 - AluSp SINE Alu -9 304 1 375 137 0 3 chr17 3869114 3869185 -81569295 + MLT1F LTR MaLR 481 591 -4 2312 113 0 10 chr17 3869866 3870175 -81568305 - AluSx SINE Alu -6 306 1 335 293 188 17 chr17 3870294 3870533 -81567947 - L2 LINE L2 -4 3268 2989 2529 62 0 0 chr17 3870815 3871107 -81567373 - AluY SINE Alu -19 292 1 2208 125 0 3 chr17 3871284 3871589 -81566891 - AluSx SINE Alu -2 310 7 1218 160 18 36 chr17 3871597 3871816 -81566664 - AluJo SINE Alu -1 311 97 2415 87 6 3 chr17 3871971 3872282 -81566198 - AluSx SINE Alu 0 312 1 613 257 11 0 chr17 3872361 3872536 -81565944 - MER104 DNA MER2_type -3 177 1 1089 249 113 32 chr17 3872597 3873135 -81565345 - HAL1b LINE L1 -728 620 39 2038 98 18 4 chr17 3873326 3873602 -81564878 + AluSx SINE Alu 20 299 -13 923 184 17 17 chr17 3873901 3874075 -81564405 + AluJo SINE Alu 121 294 -18 2269 101 7 0 chr17 3874315 3874611 -81563869 - AluY SINE Alu -13 298 1 1086 92 14 0 chr17 3874613 3874755 -81563725 - AluSq/x SINE Alu -169 144 1 252 294 160 50 chr17 3875091 3875210 -81563270 - L2 LINE L2 0 3272 3141 414 245 152 22 chr17 3875538 3875722 -81562758 - L2 LINE L2 -456 2858 2651 533 63 76 13 chr17 3876252 3876331 -81562149 - AluS SINE Alu -228 85 2 306 0 0 0 chr17 3876570 3876604 -81561876 + (CA)n Simple_repeat Simple_repeat 2 35 0 2173 116 0 56 chr17 3876679 3876998 -81561482 + AluSq SINE Alu 7 307 -6 381 222 46 52 chr17 3877198 3877213 -81561267 - Charlie2a DNA MER1_type -12 2850 2836 858 143 0 8 chr17 3877213 3877346 -81561134 - FLAM_C SINE Alu 0 133 2 381 222 46 52 chr17 3877346 3877483 -81560997 - Charlie2a DNA MER1_type -26 2836 2699 * 599 221 32 32 chr17 3877477 3877667 -81560813 - Charlie2a DNA MER1_type -1206 1656 1467 797 259 62 35 chr17 3877862 3878152 -81560328 - Charlie2a DNA MER1_type -2481 301 4 2472 80 0 6 chr17 3879162 3879475 -81559005 + AluSq SINE Alu 1 311 -2 234 62 0 0 chr17 3879615 3879647 -81558833 + (CA)n Simple_repeat Simple_repeat 1 32 0 321 259 129 17 chr17 3880216 3880332 -81558148 - MIR SINE MIR -90 172 44 2263 104 0 3 chr17 3880505 3880803 -81557677 + AluY SINE Alu 5 301 -10 34 24 0 0 chr17 3880878 3880919 -81557561 + AT_rich Low_complexity Low_complexity 1 41 0 1323 144 5 5 chr17 3881070 3881345 -81557135 + AluSx SINE Alu 1 211 -101 1797 156 32 3 chr17 3881347 3881630 -81556850 + AluSx SINE Alu 7 297 -15 408 288 18 9 chr17 3881630 3881741 -81556739 - MIR SINE MIR -131 131 20 781 206 0 0 chr17 3881759 3881885 -81556595 - FLAM_A SINE Alu -7 126 1 2272 182 42 24 chr17 3881897 3882191 -81556289 - L1MB5 LINE L1 0 6174 5866 2250 119 0 3 chr17 3882191 3882494 -81555986 - AluSx SINE Alu -10 302 1 2272 182 42 24 chr17 3882494 3882704 -81555776 - L1MB5 LINE L1 -308 5866 5661 1455 153 0 36 chr17 3882704 3882953 -81555527 - AluSx SINE Alu 0 310 71 * 2442 91 0 0 chr17 3882951 3883248 -81555232 - AluY SINE Alu -14 297 1 416 133 0 0 chr17 3883250 3883310 -81555170 - AluSx SINE Alu -232 80 21 2254 117 0 7 chr17 3883332 3883640 -81554840 - AluSg SINE Alu -4 306 1 1685 153 40 45 chr17 3883640 3883914 -81554566 - L1MB5 LINE L1 -513 5667 5394 2247 143 0 0 chr17 3883914 3884222 -81554258 - AluSg SINE Alu -2 308 1 1685 153 40 45 chr17 3884222 3884299 -81554181 - L1MB5 LINE L1 -786 5394 5318 1052 182 0 0 chr17 3884311 3884470 -81554010 - FRAM SINE Alu -17 159 1 1379 243 127 83 chr17 3884513 3884850 -81553630 - L1MC4 LINE L1 0 8042 7721 2471 90 0 10 chr17 3884850 3885162 -81553318 - AluSg SINE Alu -1 309 1 1379 243 127 83 chr17 3885162 3885209 -81553271 - L1MC4 LINE L1 -321 7721 7678 2345 102 3 0 chr17 3885209 3885504 -81552976 - AluSp SINE Alu -17 296 1 1379 243 127 83 chr17 3885504 3885627 -81552853 - L1MC4 LINE L1 -364 7678 7562 1756 137 10 73 chr17 3885627 3885940 -81552540 - AluJb SINE Alu -19 293 1 1379 243 127 83 chr17 3885940 3886234 -81552246 - L1MC4 LINE L1 -480 7562 7204 902 136 0 0 chr17 3887191 3887309 -81551171 + AluJo/FLAM SINE Alu 1 118 -194 2467 74 0 35 chr17 3887309 3887621 -81550859 - AluSx SINE Alu -11 301 1 2249 102 10 0 chr17 3887621 3887915 -81550565 - AluSx SINE Alu -15 297 1 24 0 0 0 chr17 3887928 3887952 -81550528 + AT_rich Low_complexity Low_complexity 1 24 0 662 192 172 0 chr17 3888068 3888219 -81550261 - MIR SINE MIR -69 193 17 2180 98 26 16 chr17 3888414 3888719 -81549761 - AluSx SINE Alu -1 311 4 2653 43 3 0 chr17 3888727 3889028 -81549452 - AluY SINE Alu -9 302 1 23 0 0 0 chr17 3889409 3889432 -81549048 + AT_rich Low_complexity Low_complexity 1 23 0 2004 134 10 0 chr17 3889560 3889850 -81548630 - AluSq SINE Alu -12 301 9 882 153 14 28 chr17 3889853 3889997 -81548483 - AluSg/x SINE Alu -46 266 125 1005 188 62 19 chr17 3890170 3890378 -81548102 - MER20 DNA MER1_type -2 217 1 1996 104 6 71 chr17 3890717 3891043 -81547437 - AluSx SINE Alu -7 305 1 263 222 19 0 chr17 3891091 3891145 -81547335 - MIR SINE MIR -8 254 200 2242 126 0 0 chr17 3891146 3891455 -81547025 - AluSx SINE Alu -3 309 1 2072 145 0 3 chr17 3891464 3891760 -81546720 - AluSx SINE Alu -17 295 1 2278 93 3 3 chr17 3891781 3892070 -81546410 - AluSp SINE Alu -24 289 1 2105 99 58 3 chr17 3892818 3893111 -81545369 - AluSc SINE Alu 0 309 1 2297 108 6 10 chr17 3893715 3894029 -81544451 - AluSp SINE Alu 0 313 1 767 237 53 4 chr17 3894035 3894263 -81544217 + L1MD2 LINE L1 5089 5327 -819 804 213 0 18 chr17 3894263 3894427 -81544053 + FRAM SINE Alu 1 154 -22 1224 178 19 16 chr17 3894427 3894685 -81543795 + L1MD2 LINE L1 5324 5582 -777 22 0 0 0 chr17 3894742 3894764 -81543716 + AT_rich Low_complexity Low_complexity 1 22 0 844 161 0 0 chr17 3894764 3894882 -81543598 - FLAM_C SINE Alu -25 118 1 506 68 0 0 chr17 3894884 3894957 -81543523 - AluSp/q SINE Alu -13 300 228 713 175 186 5 chr17 3894990 3895184 -81543296 + L1MD2 LINE L1 5920 6148 -211 1290 135 122 16 chr17 3895230 3895475 -81543005 - MER44D DNA MER2_type 0 605 280 425 168 22 29 chr17 3895480 3895582 -81542898 - MER44D DNA MER2_type -532 173 72 195 250 17 17 chr17 3895927 3895987 -81542493 + MIR SINE MIR 6 65 -197 2293 99 3 3 chr17 3895989 3896291 -81542189 - AluSq SINE Alu -11 302 1 1816 96 12 0 chr17 3896309 3896549 -81541931 + AluSp SINE Alu 54 296 -17 1400 184 52 42 chr17 3896598 3896907 -81541573 - AluJo SINE Alu 0 312 1 1852 110 43 7 chr17 3897142 3897443 -81541037 + THE1C LTR MaLR 63 374 -1 561 139 0 30 chr17 3897454 3897555 -81540925 - FLAM_C SINE Alu -6 137 40 207 0 0 0 chr17 3897581 3897604 -81540876 + (A)n Simple_repeat Simple_repeat 1 23 0 248 267 43 26 chr17 3897888 3898004 -81540476 - MIR SINE MIR -10 252 135 2858 237 112 60 chr17 3898020 3899033 -81539447 + L2 LINE L2 1466 2558 -756 1163 172 200 4 chr17 3899033 3899283 -81539197 + AluJo SINE Alu 1 299 -3 2858 237 112 60 chr17 3899283 3899527 -81538953 + L2 LINE L2 2558 2788 -526 215 235 24 24 chr17 3899558 3899643 -81538837 + L2 LINE L2 2887 2971 -301 306 268 104 45 chr17 3899655 3899875 -81538605 + L2 LINE L2 3081 3313 0 473 101 0 0 chr17 3899995 3900064 -81538416 + AluSq SINE Alu 2 70 -242 888 149 0 37 chr17 3900064 3900225 -81538255 + AluSp/q SINE Alu 159 313 0 1528 155 76 49 chr17 3900231 3900535 -81537945 + AluJo SINE Alu 1 312 0 239 30 0 0 chr17 3900836 3900869 -81537611 - L1PA16 LINE L1 -5 6161 6129 2525 80 0 3 chr17 3902070 3902381 -81536099 - AluSg SINE Alu 0 310 1 312 289 11 11 chr17 3902440 3902530 -81535950 - L2 LINE L2 -4 3268 3179 2408 81 0 35 chr17 3902746 3903056 -81535424 + AluSx SINE Alu 1 299 -13 2343 78 26 3 chr17 3903706 3904012 -81534468 - AluSq SINE Alu 0 313 1 328 380 0 0 chr17 3904277 3904406 -81534074 + MIR SINE MIR 21 149 -113 604 200 50 0 chr17 3904560 3904685 -81533795 + MER53 DNA DNA 2 139 -50 2012 132 4 0 chr17 3904685 3904991 -81533489 + AluSx SINE Alu 1 307 0 604 200 50 0 chr17 3904991 3905024 -81533456 + MER53 DNA DNA 139 169 -20 1359 168 0 42 chr17 3905024 3905262 -81533218 - AluJb SINE Alu -1 311 84 920 147 0 0 chr17 3905415 3905551 -81532929 + AluSg/x SINE Alu 174 309 -1 201 39 0 0 chr17 3905551 3905577 -81532903 + (GA)n Simple_repeat Simple_repeat 1 26 0 726 62 0 0 chr17 3905577 3905673 -81532807 + (GGAA)n Simple_repeat Simple_repeat 2 97 0 2050 134 3 13 chr17 3906684 3906982 -81531498 - AluSq SINE Alu -18 295 1 2070 105 14 27 chr17 3907029 3907346 -81531134 - AluSp SINE Alu 0 313 1 270 0 0 0 chr17 3907348 3907378 -81531102 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 1804 83 9 0 chr17 3907378 3907607 -81530873 - AluSg1 SINE Alu -29 280 50 982 107 0 0 chr17 3907607 3907738 -81530742 - AluSq/x SINE Alu -178 135 5 1270 132 5 44 chr17 3907851 3908087 -81530393 - AluJb SINE Alu 0 312 85 659 255 25 45 chr17 3908101 3908301 -81530179 + L1MC4a LINE L1 5512 5707 -2101 2516 82 0 13 chr17 3908301 3908618 -81529862 - AluSp SINE Alu 0 313 1 873 58 0 0 chr17 3908629 3908732 -81529748 - AluY SINE Alu -23 288 186 379 230 168 16 chr17 3908732 3908923 -81529557 + L1MC4a LINE L1 5704 5923 -1885 1749 125 95 8 chr17 3908941 3909229 -81529251 + AluSg SINE Alu 1 310 0 1763 152 48 21 chr17 3909235 3909524 -81528956 + AluJb SINE Alu 1 297 -15 2452 82 0 0 chr17 3909530 3909824 -81528656 + AluSc SINE Alu 1 294 -15 198 0 0 0 chr17 3909836 3909858 -81528622 + (CA)n Simple_repeat Simple_repeat 2 23 0 282 303 33 33 chr17 3910135 3910257 -81528223 + MIR3 SINE MIR 73 194 -14 2351 89 7 10 chr17 3910301 3910605 -81527875 + AluSx SINE Alu 1 303 -9 2019 119 20 0 chr17 3910605 3910898 -81527582 + AluSx SINE Alu 1 300 -12 249 255 224 0 chr17 3911550 3911648 -81526832 + MIR3 SINE MIR 36 155 -53 221 246 0 18 chr17 3911637 3911694 -81526786 + MER5A DNA MER1_type 112 167 -22 * 2137 116 3 3 chr17 3911711 3912005 -81526475 - AluSx SINE Alu -18 294 1 279 219 0 0 chr17 3912212 3912253 -81526227 + A-rich Low_complexity Low_complexity 1 41 0 22 0 0 0 chr17 3912260 3912282 -81526198 + GC_rich Low_complexity Low_complexity 1 22 0 23 40 0 0 chr17 3912340 3912365 -81526115 + GC_rich Low_complexity Low_complexity 1 25 0 241 328 0 0 chr17 3912367 3912428 -81526052 + A-rich Low_complexity Low_complexity 1 61 0 2245 101 0 26 chr17 3912936 3913244 -81525236 - AluSx SINE Alu -12 300 1 2421 90 0 3 chr17 3914097 3914398 -81524082 - AluSq SINE Alu -13 300 1 319 273 159 8 chr17 3915011 3915143 -81523337 + MIR3 SINE MIR 37 163 -45 334 297 69 40 chr17 3915840 3916022 -81522458 + MIR3 SINE MIR 18 205 -31 216 300 142 17 chr17 3916335 3916455 -81522025 + L3 LINE CR1 1332 1466 -111 203 189 34 11 chr17 3917772 3917831 -81520649 + MIR SINE MIR 104 161 -101 195 302 47 0 chr17 3918242 3918348 -81520132 + MIR SINE MIR 23 133 -75 203 83 28 28 chr17 3918954 3918990 -81519490 + (TCC)n Simple_repeat Simple_repeat 3 38 0 458 203 30 0 chr17 3918991 3919124 -81519356 + CT-rich Low_complexity Low_complexity 2 138 0 1123 165 6 0 chr17 3919131 3919301 -81519179 - AluJb SINE Alu -7 305 135 224 30 30 0 chr17 3919302 3919335 -81519145 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 2009 125 0 41 chr17 3919335 3919630 -81518850 - AluSq SINE Alu -30 283 1 1555 89 0 15 chr17 3919960 3920162 -81518318 - AluSc SINE Alu 0 309 111 1980 129 0 37 chr17 3920384 3920701 -81517779 - AluSx SINE Alu 0 306 1 237 286 98 0 chr17 3920740 3920842 -81517638 + MIR SINE MIR 28 137 -71 1111 156 78 0 chr17 3920854 3921033 -81517447 - AluJo SINE Alu -47 265 73 304 308 108 8 chr17 3922130 3922168 -81516312 - MIR SINE MIR -110 152 119 1835 113 109 22 chr17 3922168 3922443 -81516037 + AluSg SINE Alu 1 299 -11 304 308 108 8 chr17 3922443 3922524 -81515956 - MIR SINE MIR -143 119 21 183 239 0 0 chr17 3922608 3922654 -81515826 - MIR SINE MIR -112 150 105 236 309 57 16 chr17 3922777 3922900 -81515580 + L2 LINE L2 2923 3050 -222 2462 77 0 26 chr17 3923413 3923724 -81514756 - AluSg SINE Alu -7 303 1 2381 92 0 0 chr17 3923724 3924016 -81514464 - AluSx SINE Alu -20 292 1 270 155 48 95 chr17 3924781 3924834 -81513646 - FLAM SINE Alu -179 123 84 1580 141 0 0 chr17 3924834 3925054 -81513426 - AluJo SINE Alu -92 220 1 270 155 48 95 chr17 3925054 3925084 -81513396 - FLAM SINE Alu -218 84 54 1078 130 59 18 chr17 3925309 3925498 -81512982 - AluSg/x SINE Alu 0 312 121 2384 113 0 0 chr17 3925507 3925818 -81512662 - AluSx SINE Alu -1 311 1 1973 169 0 0 chr17 3925913 3926214 -81512266 + AluJo SINE Alu 1 301 -11 216 0 0 0 chr17 3927566 3927590 -81510890 + (TCCA)n Simple_repeat Simple_repeat 2 25 0 2228 103 7 0 chr17 3927812 3928122 -81510358 + AluSx SINE Alu 1 312 0 2057 116 10 42 chr17 3928141 3928452 -81510028 + AluSx SINE Alu 1 301 -11 204 250 36 27 chr17 3928458 3928570 -81509910 + (TATATG)n Simple_repeat Simple_repeat 4 116 0 290 250 50 0 chr17 3929251 3929331 -81509149 + MIR SINE MIR 82 165 -97 2426 85 3 3 chr17 3929369 3929676 -81508804 - AluSq SINE Alu -6 307 1 1088 248 131 65 chr17 3929681 3930141 -81508339 - MLT1G1 LTR MaLR 0 595 90 1788 172 3 3 chr17 3930141 3930437 -81508043 + AluSx SINE Alu 1 296 -16 1088 248 131 65 chr17 3930437 3930532 -81507948 - MLT1G1 LTR MaLR -505 90 3 801 247 128 45 chr17 3930821 3930955 -81507525 - L2 LINE L2 -1 3312 3191 2400 101 0 0 chr17 3930955 3931252 -81507228 + AluSg SINE Alu 1 297 -13 2213 106 3 10 chr17 3931253 3931555 -81506925 + AluSx SINE Alu 1 300 -12 801 247 128 45 chr17 3931555 3931975 -81506505 - L2 LINE L2 -121 3192 2708 441 293 105 38 chr17 3931980 3932352 -81506128 - MLT1H LTR MaLR 0 549 153 1916 119 10 17 chr17 3932369 3932664 -81505816 - AluSx SINE Alu -19 293 1 249 273 0 91 chr17 3932664 3932785 -81505695 - MLT1H LTR MaLR -419 123 14 1432 195 18 131 chr17 3932798 3932852 -81505628 - L2 LINE L2 -607 2707 2649 617 184 22 44 chr17 3932852 3932988 -81505492 + FLAM_C SINE Alu 1 133 0 1432 195 18 131 chr17 3932988 3933385 -81505095 - L2 LINE L2 -665 2649 2307 850 63 16 8 chr17 3933390 3933516 -81504964 + (TTTC)n Simple_repeat Simple_repeat 2 128 0 2015 96 7 4 chr17 3933517 3933797 -81504683 - AluSq SINE Alu -32 281 1 1902 134 0 7 chr17 3933806 3934096 -81504384 - AluJb SINE Alu -24 288 1 1429 127 0 9 chr17 3934138 3934351 -81504129 + AluSg/x SINE Alu 93 303 -9 388 141 343 20 chr17 3934351 3934450 -81504030 - L2 LINE L2 -1020 2294 2164 1009 132 18 150 chr17 3934817 3934859 -81503621 - L1MB8 LINE L1 0 6184 6138 2115 105 3 0 chr17 3934859 3935145 -81503335 + AluSx SINE Alu 3 289 -23 1009 132 18 150 chr17 3935145 3935428 -81503052 - L1MB8 LINE L1 -46 6138 5902 751 248 34 41 chr17 3935504 3935635 -81502845 - HAL1b LINE L1 -451 897 767 2228 106 3 0 chr17 3935635 3935936 -81502544 - AluSp SINE Alu -11 302 1 751 248 34 41 chr17 3935936 3936099 -81502381 - HAL1b LINE L1 -581 767 605 2101 141 0 0 chr17 3936166 3936478 -81502002 - AluJb SINE Alu 0 312 1 2269 87 3 3 chr17 3936573 3936871 -81501609 - AluSx SINE Alu -14 298 1 180 111 0 0 chr17 3936894 3936921 -81501559 + (TTCC)n Simple_repeat Simple_repeat 3 29 0 1914 148 19 16 chr17 3937489 3937800 -81500680 - AluJb SINE Alu 0 312 1 1900 122 37 10 chr17 3938103 3938399 -81500081 - AluSq SINE Alu -9 304 1 229 351 0 6 chr17 3939629 3939803 -81498677 + (TG)n Simple_repeat Simple_repeat 1 173 0 253 354 54 0 chr17 3940647 3940777 -81497703 - MIR3 SINE MIR -9 199 63 2313 95 0 9 chr17 3942666 3942981 -81495499 - AluSx SINE Alu 0 312 1 424 293 38 15 chr17 3943506 3943639 -81494841 - MIR SINE MIR -38 170 35 2214 92 7 0 chr17 3943656 3943950 -81494530 - AluSq SINE Alu -17 296 1 700 269 23 0 chr17 3944429 3944604 -81493876 + MIR SINE MIR 23 201 -61 212 254 18 0 chr17 3944746 3944801 -81493679 - L3 LINE CR1 -102 1475 1420 255 250 157 0 chr17 3944941 3945051 -81493429 + MIR SINE MIR 38 172 -63 264 204 0 0 chr17 3945239 3945293 -81493187 - L3 LINE CR1 -291 1286 1233 339 282 183 12 chr17 3945710 3946033 -81492447 - L2 LINE L2 -1437 1877 1500 494 261 17 52 chr17 3946301 3946511 -81491969 + MIR SINE MIR 5 203 -59 2332 91 3 0 chr17 3946585 3946892 -81491588 - AluSc SINE Alu -1 308 1 197 307 85 53 chr17 3946930 3946977 -81491503 - L3 LINE CR1 -3 1574 1530 581 256 26 37 chr17 3946977 3947168 -81491312 - MER5A DNA MER1_type 0 189 1 197 307 85 53 chr17 3947168 3947309 -81491171 - L3 LINE CR1 -47 1530 1380 576 282 164 14 chr17 3948796 3949016 -81489464 + MIR SINE MIR 2 254 -8 2187 127 0 0 chr17 3949019 3949327 -81489153 - AluSx SINE Alu -4 308 1 279 294 104 31 chr17 3949712 3949875 -81488605 - L2 LINE L2 -172 3100 2926 497 313 38 0 chr17 3949954 3950091 -81488389 - MIR SINE MIR -89 173 28 2313 90 6 0 chr17 3950091 3950402 -81488078 - AluSq SINE Alu 0 313 1 497 313 38 0 chr17 3950402 3950424 -81488056 - MIR SINE MIR -234 28 8 1420 267 91 9 chr17 3951383 3951598 -81486882 - L2 LINE L2 -1 3312 3116 2286 87 13 0 chr17 3951598 3951898 -81486582 + AluSg SINE Alu 1 304 -6 1420 267 91 9 chr17 3951898 3952435 -81486045 - L2 LINE L2 -197 3116 2500 2222 103 10 0 chr17 3953134 3953435 -81485045 - AluSq SINE Alu -9 304 1 1740 162 7 23 chr17 3954437 3954746 -81483734 + AluSx SINE Alu 1 304 -8 2263 75 17 0 chr17 3955836 3956129 -81482351 - AluSp SINE Alu -15 298 1 917 139 0 7 chr17 3956130 3956267 -81482213 - AluSq/x SINE Alu -177 136 1 252 314 25 16 chr17 3956550 3956671 -81481809 - LTR67 LTR ERVL -2 555 434 2198 112 26 0 chr17 3956915 3957220 -81481260 + AluSp SINE Alu 1 313 0 214 365 52 26 chr17 3957265 3957380 -81481100 + MIR3 SINE MIR 89 206 -2 450 253 106 88 chr17 3957812 3958085 -81480395 - L2 LINE L2 0 3272 2995 2322 64 0 10 chr17 3958413 3958708 -81479772 - AluY SINE Alu -19 292 1 199 211 0 0 chr17 3959616 3959654 -81478826 - MIR SINE MIR -62 146 109 358 252 17 50 chr17 3960051 3960170 -81478310 - MIR SINE MIR -64 144 30 21 36 0 0 chr17 3960998 3961026 -81477454 + GC_rich Low_complexity Low_complexity 1 28 0 304 183 25 33 chr17 3961174 3961294 -81477186 + (CCG)n Simple_repeat Simple_repeat 1 119 0 34 0 0 0 chr17 3961328 3961362 -81477118 + GC_rich Low_complexity Low_complexity 1 34 0 331 303 38 23 chr17 3962233 3962365 -81476115 + MIR3 SINE MIR 23 156 -52 266 385 96 0 chr17 3962587 3962722 -81475758 - MIR3 SINE MIR -13 195 48 494 278 14 4 chr17 3963706 3963862 -81474618 - MIR3 SINE MIR -61 147 3 2388 84 3 0 chr17 3963979 3964289 -81474191 + AluSx SINE Alu 1 311 -1 435 268 43 0 chr17 3964378 3964516 -81473964 + MER103 DNA DNA 21 164 -2 625 175 0 58 chr17 3964710 3964830 -81473650 - AluJo SINE Alu -11 301 189 1975 110 40 0 chr17 3964849 3965121 -81473359 + AluSx SINE Alu 2 284 -28 262 204 0 0 chr17 3965213 3965267 -81473213 + AluJ/monomer SINE Alu 248 301 -1 21 36 0 0 chr17 3965267 3965295 -81473185 + AT_rich Low_complexity Low_complexity 1 28 0 931 169 42 0 chr17 3965324 3965490 -81472990 - AluJo SINE Alu -125 187 15 495 350 104 30 chr17 3965506 3965929 -81472551 + L2 LINE L2 2195 2668 -646 2304 93 0 3 chr17 3965929 3966231 -81472249 - AluSx SINE Alu -11 301 1 495 350 104 30 chr17 3966231 3966347 -81472133 + L2 LINE L2 2668 2774 -540 906 71 0 0 chr17 3966362 3966475 -81472005 + AluSc SINE Alu 1 113 -196 4588 56 15 7 chr17 3966586 3967306 -81471174 + SVA Other Other 316 1157 -229 1061 117 111 6 chr17 3967331 3967502 -81470978 + AluSg/x SINE Alu 102 290 -20 887 299 95 50 chr17 3969991 3970436 -81468044 + HAL1 LINE L1 1060 1558 -949 1806 169 0 0 chr17 3970436 3970731 -81467749 - AluJo SINE Alu -13 299 5 887 299 95 50 chr17 3970731 3971073 -81467407 + HAL1 LINE L1 1558 1883 -624 21 0 0 0 chr17 3971121 3971142 -81467338 + AT_rich Low_complexity Low_complexity 1 21 0 2309 66 7 0 chr17 3971149 3971438 -81467042 + AluY SINE Alu 1 291 -20 200 136 0 68 chr17 3971576 3971620 -81466860 + (TTTTTG)n Simple_repeat Simple_repeat 1 41 0 2065 67 32 21 chr17 3971856 3972141 -81466339 + AluSp SINE Alu 1 288 -25 762 80 0 0 chr17 3972250 3972350 -81466130 + AluSg/x SINE Alu 196 295 -15 2242 102 3 3 chr17 3972482 3972795 -81465685 + AluSp SINE Alu 1 313 0 1975 131 7 0 chr17 3972801 3973091 -81465389 + AluSx SINE Alu 1 292 -20 3945 128 134 43 chr17 3973230 3974641 -81463839 - pTR5 LTR ERV1 0 2438 742 542 189 23 23 chr17 3974708 3974840 -81463640 - LTR45 LTR ERV1 0 525 394 2248 41 24 10 chr17 3974880 3975173 -81463307 + AluY SINE Alu 1 297 -14 2196 240 121 40 chr17 3975528 3975721 -81462759 + HAL1 LINE L1 261 437 -2070 2196 86 0 0 chr17 3975721 3976028 -81462452 + AluSg SINE Alu 1 307 0 2196 240 121 40 chr17 3976028 3976944 -81461536 + HAL1 LINE L1 437 1460 -1047 24 0 0 0 chr17 3976944 3976968 -81461512 + AT_rich Low_complexity Low_complexity 1 24 0 32 0 0 0 chr17 3977173 3977205 -81461275 + AT_rich Low_complexity Low_complexity 1 32 0 1331 34 0 53 chr17 3977844 3978053 -81460427 - SVA Other Other -1188 198 1 2296 94 0 7 chr17 3978090 3978399 -81460081 - AluSx SINE Alu -5 307 1 2130 119 0 34 chr17 3979718 3980038 -81458442 - AluSx SINE Alu -3 309 1 271 287 104 9 chr17 3980045 3980160 -81458320 + L2 LINE L2 2400 2525 -789 212 355 86 0 chr17 3980190 3980283 -81458197 - L2 LINE L2 -4 3309 3209 405 0 0 0 chr17 3980308 3980353 -81458127 + (TG)n Simple_repeat Simple_repeat 1 45 0 183 287 73 45 chr17 3980528 3980775 -81457705 - L2 LINE L2 -1040 2274 2021 322 237 29 58 chr17 3980911 3981050 -81457430 + MIR3 SINE MIR 1 135 -73 25 65 0 0 chr17 3983421 3983467 -81455013 + GC_rich Low_complexity Low_complexity 1 46 0 21 0 0 0 chr17 3983877 3983898 -81454582 + GC_rich Low_complexity Low_complexity 1 21 0 258 32 0 0 chr17 3985483 3985514 -81452966 + (GA)n Simple_repeat Simple_repeat 2 32 0 239 338 64 39 chr17 3985814 3986048 -81452432 - L2 LINE L2 -905 2409 2170 245 340 32 53 chr17 3987760 3987948 -81450532 + MIR3 SINE MIR 5 188 -20 218 284 154 79 chr17 3988724 3988925 -81449555 + L2 LINE L2 1796 1981 -1333 2441 87 0 0 chr17 3988925 3989237 -81449243 - AluSx SINE Alu 0 312 1 218 284 154 79 chr17 3989237 3989595 -81448885 + L2 LINE L2 1980 2397 -917 242 388 165 0 chr17 3989967 3990173 -81448307 + L2 LINE L2 2938 3177 -95 240 357 29 53 chr17 3990424 3990595 -81447885 + MIR SINE MIR 74 240 -22 278 270 79 53 chr17 3990604 3990756 -81447724 - MIR3 SINE MIR -50 158 3 244 236 0 42 chr17 3991593 3991665 -81446815 + L3 LINE CR1 1401 1469 -108 182 189 0 0 chr17 3991765 3991802 -81446678 - L2 LINE L2 -208 3064 3028 2079 112 0 3 chr17 3993137 3993471 -81445009 + AluSx SINE Alu 1 333 0 275 239 147 91 chr17 3995207 3995492 -81442988 - L2 LINE L2 -22 3250 2950 360 256 103 0 chr17 3996400 3996517 -81441963 - MIR3 SINE MIR -22 186 58 330 260 30 0 chr17 3996923 3997023 -81441457 - LTR33 LTR ERVL -2 519 417 448 304 131 0 chr17 3997097 3997311 -81441169 - LTR33 LTR ERVL -239 282 41 2022 128 3 3 chr17 3997512 3997810 -81440670 + AluSx SINE Alu 1 298 -14 251 197 0 45 chr17 3997879 3997945 -81440535 + (CCCCAG)n Simple_repeat Simple_repeat 2 64 0 1701 181 0 20 chr17 4000097 4000396 -81438084 + AluJb SINE Alu 1 293 -19 244 281 25 8 chr17 4000401 4000478 -81438002 + HAL1b LINE L1 1226 1300 -48 291 28 0 0 chr17 4000478 4000514 -81437966 + (ATTG)n Simple_repeat Simple_repeat 4 39 0 1800 153 14 0 chr17 4000515 4000790 -81437690 - AluJo SINE Alu -33 279 1 244 281 25 8 chr17 4000790 4000831 -81437649 + HAL1b LINE L1 1299 1348 0 553 155 124 72 chr17 4000995 4001189 -81437291 - MER46A DNA MER2_type -1 235 32 2415 87 0 0 chr17 4001282 4001593 -81436887 - AluSq SINE Alu -2 311 1 658 51 0 0 chr17 4001593 4001672 -81436808 - AluSq/x SINE Alu -177 135 57 527 354 134 29 chr17 4002084 4002561 -81435919 + L3 LINE CR1 1001 1527 -50 2298 119 0 0 chr17 4002804 4003115 -81435365 - AluSx SINE Alu -1 311 1 2197 101 7 0 chr17 4003644 4003941 -81434539 - AluSx SINE Alu -13 299 1 2007 134 7 3 chr17 4004125 4004431 -81434049 - AluJb SINE Alu -5 307 1 548 314 105 0 chr17 4004439 4004630 -81433850 - MIR SINE MIR -10 252 42 2294 80 3 13 chr17 4005092 4005392 -81433088 - AluSx SINE Alu -15 297 1 1387 180 3 42 chr17 4005574 4005697 -81432783 + AluJo SINE Alu 21 147 -165 2281 86 0 19 chr17 4005697 4006011 -81432469 + AluSq SINE Alu 1 308 -5 1387 180 3 42 chr17 4006011 4006171 -81432309 + AluJo SINE Alu 147 293 -19 1521 194 33 0 chr17 4009479 4009778 -81428702 + AluJb SINE Alu 1 308 0 2365 85 0 0 chr17 4010090 4010397 -81428083 - AluSx SINE Alu -5 307 1 611 68 0 0 chr17 4010668 4010742 -81427738 + AluSp/q SINE Alu 216 289 -24 2117 102 0 32 chr17 4010752 4011067 -81427413 + AluY SINE Alu 1 305 -6 343 276 95 9 chr17 4011096 4011306 -81427174 - L1MC4a LINE L1 -1555 6253 6026 2226 91 44 0 chr17 4011388 4011685 -81426795 - AluSq SINE Alu -3 310 1 611 68 0 0 chr17 4011695 4011769 -81426711 - AluSp/q SINE Alu -24 289 216 868 126 47 126 chr17 4012448 4012614 -81425866 - Charlie5 DNA MER1_type 0 2585 2448 2245 83 3 17 chr17 4012614 4012916 -81425564 + AluSx SINE Alu 1 298 -14 868 126 47 126 chr17 4012916 4013026 -81425454 - Charlie5 DNA MER1_type -137 2448 2331 275 357 170 6 chr17 4013079 4013261 -81425219 + MIR SINE MIR 45 256 -6 205 282 103 0 chr17 4013618 4013696 -81424784 - MIR SINE MIR -62 146 61 199 250 225 15 chr17 4014518 4014643 -81423837 - MIR SINE MIR -68 140 19 180 345 58 23 chr17 4015533 4015620 -81422860 + L2 LINE L2 2987 3076 -196 1051 216 11 42 chr17 4017939 4018203 -81420277 - MIR SINE MIR 0 262 7 345 294 43 49 chr17 4018826 4018989 -81419491 + MER5A DNA MER1_type 24 185 -4 208 306 69 0 chr17 4018980 4019052 -81419428 - MIR3 SINE MIR -39 169 93 * 1027 166 0 0 chr17 4019811 4019974 -81418506 + AluJb SINE Alu 134 296 -16 216 365 78 17 chr17 4019983 4020213 -81418267 - L2 LINE L2 -1544 1770 1527 195 222 37 19 chr17 4020944 4020998 -81417482 - L2 LINE L2 -212 3060 3006 307 310 77 36 chr17 4021389 4021558 -81416922 + MIR3 SINE MIR 3 183 -63 230 337 12 0 chr17 4021767 4021850 -81416630 - L2 LINE L2 -213 3059 2976 384 282 46 23 chr17 4022460 4022591 -81415889 + MIR SINE MIR 66 199 -63 357 281 0 0 chr17 4023152 4023287 -81415193 + (TG)n Simple_repeat Simple_repeat 1 135 0 294 414 37 0 chr17 4025762 4025924 -81412556 - MIR SINE MIR -59 203 36 2339 99 0 3 chr17 4026551 4026864 -81411616 + AluSx SINE Alu 1 312 0 370 325 20 54 chr17 4026982 4027185 -81411295 - L2 LINE L2 -85 3187 2992 227 222 22 74 chr17 4027239 4027374 -81411106 + L1MEd LINE L1 73 200 -5919 295 178 22 44 chr17 4027444 4027534 -81410946 - L1MC5 LINE L1 -35 7926 7839 783 304 66 68 chr17 4027767 4027896 -81410584 + L1MEd LINE L1 583 711 -5408 2173 86 10 3 chr17 4027896 4028188 -81410292 + AluSq SINE Alu 1 294 -19 783 304 66 68 chr17 4028188 4028544 -81409936 + L1MEd LINE L1 711 1067 -5052 188 391 30 17 chr17 4028610 4028763 -81409717 - L2 LINE L2 -455 2859 2701 2539 52 3 0 chr17 4028763 4029073 -81409407 + AluY SINE Alu 1 311 0 188 391 30 17 chr17 4029073 4029149 -81409331 - L2 LINE L2 -613 2701 2627 322 263 30 20 chr17 4030586 4030685 -81407795 + MIR3 SINE MIR 56 155 -53 428 230 135 32 chr17 4031243 4031369 -81407111 + MIR SINE MIR 13 151 -111 247 375 0 0 chr17 4031552 4031656 -81406824 + L2 LINE L2 2988 3091 -181 460 306 61 25 chr17 4031970 4032078 -81406402 - MIR SINE MIR -24 238 118 1874 207 39 42 chr17 4032078 4032437 -81406043 - MER63B DNA MER1_type -629 433 74 2175 105 0 0 chr17 4032437 4032733 -81405747 + AluSx SINE Alu 1 296 -16 1874 207 39 42 chr17 4032733 4032807 -81405673 - MER63B DNA MER1_type -988 74 1 460 306 61 25 chr17 4032807 4032894 -81405586 - MIR SINE MIR -144 118 36 227 191 32 32 chr17 4033056 4033119 -81405361 + CT-rich Low_complexity Low_complexity 1 63 0 937 275 53 77 chr17 4033419 4033677 -81404803 + L2 LINE L2 2702 2964 -349 2053 107 3 10 chr17 4033677 4033975 -81404505 + AluSx SINE Alu 1 296 -16 937 275 53 77 chr17 4033975 4034006 -81404474 + L2 LINE L2 2964 2994 -319 1751 111 96 4 chr17 4034006 4034276 -81404204 + AluSx SINE Alu 1 295 -17 937 275 53 77 chr17 4034276 4034530 -81403950 + L2 LINE L2 2994 3307 -6 381 257 62 9 chr17 4034617 4034730 -81403750 + MIR SINE MIR 30 148 -60 505 272 26 101 chr17 4034732 4034923 -81403557 + MIR SINE MIR 2 169 -93 2067 127 3 0 chr17 4034923 4035222 -81403258 + AluSx SINE Alu 1 300 -12 505 272 26 101 chr17 4035222 4035298 -81403182 + MIR SINE MIR 169 249 -13 440 258 8 32 chr17 4035980 4036104 -81402376 + MIR3 SINE MIR 7 127 -81 559 243 111 17 chr17 4036203 4036384 -81402096 + MIR SINE MIR 46 243 -19 354 265 39 10 chr17 4036409 4036511 -81401969 + L3 LINE CR1 1399 1503 -74 191 111 44 0 chr17 4036692 4036737 -81401743 - L2 LINE L2 -212 3060 3014 2293 109 0 0 chr17 4036841 4037153 -81401327 + AluSq SINE Alu 1 312 -1 181 352 48 8 chr17 4037174 4037299 -81401181 - L2 LINE L2 -481 2833 2704 1205 273 77 37 chr17 4038024 4038544 -81399936 + L1ME2 LINE L1 5247 5802 -362 2239 100 0 0 chr17 4038544 4038843 -81399637 - AluSq SINE Alu -14 299 1 1205 273 77 37 chr17 4038843 4038940 -81399540 + L1ME2 LINE L1 5802 5894 -270 1991 102 3 56 chr17 4038975 4039298 -81399182 - AluSq SINE Alu -7 306 1 1551 179 3 14 chr17 4039307 4039450 -81399030 - AluJo SINE Alu -25 287 144 2278 99 0 0 chr17 4039450 4039754 -81398726 - AluSg1 SINE Alu -5 304 1 1551 179 3 14 chr17 4039754 4039900 -81398580 - AluJo SINE Alu -168 144 1 1859 112 63 0 chr17 4039929 4040214 -81398266 + AluSg SINE Alu 1 303 -7 520 189 24 0 chr17 4042610 4042737 -81395743 + (TCCA)n Simple_repeat Simple_repeat 3 132 0 258 250 21 31 chr17 4047198 4047294 -81391186 + CT-rich Low_complexity Low_complexity 5 99 0 203 152 87 0 chr17 4048277 4048323 -81390157 + MIR SINE MIR 68 117 -91 1712 136 19 30 chr17 4049289 4049326 -81389154 + LTR47A LTR ERVL 13 49 -403 2050 99 3 65 chr17 4049326 4049648 -81388832 - AluSx SINE Alu -10 302 1 1712 136 19 30 chr17 4049648 4050005 -81388475 + LTR47A LTR ERVL 49 452 0 2118 120 0 13 chr17 4050026 4050342 -81388138 - AluSx SINE Alu 0 312 1 1745 221 85 38 chr17 4050351 4050961 -81387519 - L1M4 LINE L1 -892 5254 4616 1931 148 3 0 chr17 4050990 4051288 -81387192 + AluSx SINE Alu 1 299 -13 261 0 0 0 chr17 4051321 4051350 -81387130 + (TA)n Simple_repeat Simple_repeat 2 30 0 2334 79 0 7 chr17 4051350 4051653 -81386827 - AluSc SINE Alu -8 301 1 705 215 77 127 chr17 4051653 4052058 -81386422 + MLT1G3 LTR MaLR 106 595 0 2056 108 0 26 chr17 4052135 4052440 -81386040 + AluSx SINE Alu 1 297 -15 1828 80 0 4 chr17 4052572 4052811 -81385669 + AluY SINE Alu 1 238 -73 234 0 0 0 chr17 4052814 4052840 -81385640 + (A)n Simple_repeat Simple_repeat 1 26 0 322 73 18 18 chr17 4053561 4053616 -81384864 + (TG)n Simple_repeat Simple_repeat 2 56 0 2078 111 10 3 chr17 4053966 4054264 -81384216 + AluSx SINE Alu 1 300 -12 2412 81 0 0 chr17 4054650 4054957 -81383523 - AluSx SINE Alu -5 307 1 945 304 84 35 chr17 4054957 4055471 -81383009 - L1MC4a LINE L1 -977 6831 6293 2182 99 0 3 chr17 4055473 4055767 -81382713 + AluSx SINE Alu 1 293 -19 790 270 43 13 chr17 4055770 4056003 -81382477 - L1MC4a LINE L1 -2001 5807 5568 568 212 150 16 chr17 4056006 4056199 -81382281 - L1MC4a LINE L1 -2258 5550 5332 2230 97 0 22 chr17 4056202 4056522 -81381958 - AluSp SINE Alu 0 313 1 204 125 0 0 chr17 4056544 4056576 -81381904 + (TG)n Simple_repeat Simple_repeat 2 33 0 1894 120 11 4 chr17 4056576 4056852 -81381628 - AluSx SINE Alu -34 278 1 1879 160 3 13 chr17 4056883 4057190 -81381290 + AluJb SINE Alu 1 304 -8 452 313 28 17 chr17 4057208 4057387 -81381093 + L2 LINE L2 2550 2730 -584 741 193 7 0 chr17 4057456 4057596 -81380884 - LTR64 LTR ERVK -415 143 3 214 254 73 0 chr17 4057702 4057757 -81380723 + L2 LINE L2 3148 3206 -66 2361 58 3 26 chr17 4057778 4058089 -81380391 - AluY SINE Alu -7 304 1 2072 106 3 7 chr17 4059985 4060288 -81378192 + AluSq SINE Alu 1 302 -11 24 32 0 0 chr17 4060312 4060343 -81378137 + AT_rich Low_complexity Low_complexity 1 31 0 2175 106 0 7 chr17 4060348 4060649 -81377831 - AluSq SINE Alu -14 299 1 1154 150 19 33 chr17 4060653 4060816 -81377664 - AluJo SINE Alu -18 294 130 233 0 62 0 chr17 4060816 4060848 -81377632 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 2024 71 18 18 chr17 4060848 4061130 -81377350 - AluY SINE Alu -29 282 1 1154 150 19 33 chr17 4061130 4061178 -81377302 - AluJo SINE Alu -180 132 85 637 170 30 0 chr17 4061247 4061347 -81377133 - U6 snRNA snRNA -4 103 1 2026 125 0 0 chr17 4061453 4061750 -81376730 + AluSx SINE Alu 1 297 -15 2176 101 7 3 chr17 4061785 4062093 -81376387 + AluSg SINE Alu 1 309 -1 397 181 21 0 chr17 4062093 4062187 -81376293 + GA-rich Low_complexity Low_complexity 1 96 0 870 71 11 50 chr17 4062189 4062371 -81376109 + (GAAA)n Simple_repeat Simple_repeat 2 176 0 505 285 85 41 chr17 4062381 4062676 -81375804 - HAL1 LINE L1 -84 2423 2116 897 300 98 23 chr17 4062727 4063218 -81375262 + MLT1G LTR MaLR 10 555 0 1666 236 83 48 chr17 4063219 4063762 -81374718 + L2 LINE L2 2381 2942 -372 2356 266 123 36 chr17 4063770 4064990 -81373490 - HAL1 LINE L1 -439 2068 743 1759 141 19 44 chr17 4065006 4065410 -81373070 - AluSp SINE Alu 0 396 1 240 261 11 45 chr17 4065426 4065514 -81372966 - HAL1 LINE L1 -1783 724 640 357 338 109 42 chr17 4065542 4065945 -81372535 - HAL1 LINE L1 -2076 431 2 379 296 23 38 chr17 4066089 4066221 -81372259 + MIR SINE MIR 133 262 0 181 263 0 0 chr17 4066608 4066646 -81371834 + MIR SINE MIR 42 79 -129 526 240 113 70 chr17 4066653 4066882 -81371598 + MIR SINE MIR 20 258 -4 2115 84 0 7 chr17 4067237 4067550 -81370930 - AluSq SINE Alu 0 313 3 2338 93 0 0 chr17 4067682 4067984 -81370496 - AluSx SINE Alu -10 302 1 1220 242 31 92 chr17 4068386 4068960 -81369520 + MER34 LTR ERV1 1 539 -3 2134 91 14 0 chr17 4070396 4070683 -81367797 - AluSp SINE Alu -22 291 1 1874 103 46 4 chr17 4070903 4071184 -81367296 + AluSq SINE Alu 1 293 -20 2382 89 0 6 chr17 4071337 4071650 -81366830 + AluSx SINE Alu 1 311 -1 29 0 0 0 chr17 4072026 4072055 -81366425 + AT_rich Low_complexity Low_complexity 1 29 0 2260 90 0 3 chr17 4072055 4072354 -81366126 + AluSq SINE Alu 1 298 -15 1252 151 5 23 chr17 4072524 4072742 -81365738 + AluJb SINE Alu 85 298 -14 231 188 0 0 chr17 4072855 4072903 -81365577 + GA-rich Low_complexity Low_complexity 4 51 0 614 237 132 26 chr17 4073961 4074151 -81364329 - MER63A DNA MER1_type 0 210 1 3652 128 11 5 chr17 4075139 4075692 -81362788 + L1PA15 LINE L1 5606 6161 -4 1079 145 0 31 chr17 4075790 4075983 -81362497 - AluSg/x SINE Alu -5 305 119 473 209 18 67 chr17 4076002 4076192 -81362288 - MER106B DNA MER1_type -5 1054 856 2008 84 4 0 chr17 4076192 4076453 -81362027 + AluSq SINE Alu 1 262 -51 225 0 0 0 chr17 4076455 4076480 -81362000 + (TAA)n Simple_repeat Simple_repeat 2 26 0 473 209 18 67 chr17 4076480 4076548 -81361932 - MER106B DNA MER1_type -204 855 1 2045 117 10 10 chr17 4076644 4076942 -81361538 + AluSx SINE Alu 1 298 -14 214 346 55 16 chr17 4078434 4078561 -81359919 + L2 LINE L2 3180 3311 -2 1633 139 17 50 chr17 4078904 4079206 -81359274 - AluJb SINE Alu -20 292 1 460 263 2 14 chr17 4079234 4079371 -81359109 - MIR SINE MIR -62 146 16 203 354 0 0 chr17 4082307 4082389 -81356091 + G-rich Low_complexity Low_complexity 6 87 0 264 139 0 0 chr17 4082809 4082852 -81355628 - MIR SINE MIR -9 253 211 195 220 0 0 chr17 4083548 4083598 -81354882 + (CACG)n Simple_repeat Simple_repeat 2 51 0 187 268 71 71 chr17 4083742 4083854 -81354626 + L2 LINE L2 2722 2833 -481 2115 97 3 32 chr17 4084177 4084487 -81353993 - AluSg SINE Alu -9 301 1 245 333 37 37 chr17 4084560 4084695 -81353785 + L2 LINE L2 3129 3263 -9 2203 119 0 0 chr17 4084886 4085198 -81353282 - AluSx SINE Alu 0 312 1 1192 274 111 22 chr17 4085356 4085884 -81352596 - L1MC4a LINE L1 -588 5563 5396 2245 102 0 3 chr17 4085884 4086189 -81352291 - AluSq SINE Alu -9 304 1 1192 274 111 22 chr17 4086189 4086209 -81352271 - L1MC4a LINE L1 -755 5396 5379 532 221 40 137 chr17 4086405 4086531 -81351949 + MLT1F-int LTR MaLR 1078 1215 -156 2147 113 10 0 chr17 4086531 4086832 -81351648 + AluSq SINE Alu 3 306 -7 532 221 40 137 chr17 4086832 4087026 -81351454 + MLT1F-int LTR MaLR 1215 1367 -4 1457 211 36 75 chr17 4087032 4087472 -81351008 + MLT1F LTR MaLR 2 424 -118 1092 191 11 0 chr17 4087505 4087694 -81350786 - AluJb SINE Alu -8 304 114 2084 112 0 19 chr17 4087822 4088156 -81350324 - AluSx SINE Alu 0 312 3 1638 171 27 13 chr17 4088682 4088806 -81349674 + AluJo SINE Alu 3 124 -188 2232 107 0 3 chr17 4088806 4089114 -81349366 + AluSx SINE Alu 1 307 -5 1638 171 27 13 chr17 4089114 4089287 -81349193 + AluJo SINE Alu 124 304 -8 2178 88 14 10 chr17 4089357 4089654 -81348826 + AluSx SINE Alu 1 298 -14 1035 174 19 31 chr17 4090217 4090507 -81347973 - MER89 LTR ERV1 -170 389 1 707 201 41 106 chr17 4090507 4090800 -81347680 - L1ME LINE L1 -628 5538 5265 757 83 0 0 chr17 4090949 4091045 -81347435 + AluSc SINE Alu 201 296 -13 23 0 0 0 chr17 4091967 4091990 -81346490 + AT_rich Low_complexity Low_complexity 1 23 0 205 276 0 26 chr17 4092836 4092912 -81345568 + (TG)n Simple_repeat Simple_repeat 1 74 0 230 274 0 0 chr17 4097703 4097765 -81340715 + C-rich Low_complexity Low_complexity 6 67 0 2095 92 0 27 chr17 4098758 4099050 -81339430 - AluSg SINE Alu -26 284 1 1974 133 10 0 chr17 4099538 4099832 -81338648 - AluSg SINE Alu -13 297 1 271 317 125 0 chr17 4100285 4100405 -81338075 + MIR SINE MIR 95 229 -33 200 184 0 0 chr17 4101420 4101458 -81337022 + (GGCTG)n Simple_repeat Simple_repeat 4 41 0 2061 104 9 35 chr17 4102120 4102438 -81336042 + AluSq SINE Alu 1 310 -3 241 242 13 41 chr17 4103319 4103431 -81335049 + MIR SINE MIR 10 114 -94 * 311 349 61 28 chr17 4103414 4103626 -81334854 - MIR SINE MIR -3 259 41 744 156 0 0 chr17 4103653 4103762 -81334718 - FRAM SINE Alu -58 118 10 2310 92 0 0 chr17 4104052 4104347 -81334133 + AluSq SINE Alu 1 295 -18 2018 109 46 0 chr17 4105463 4105747 -81332733 - AluSx SINE Alu -15 297 1 198 208 21 21 chr17 4105818 4105866 -81332614 - MIR SINE MIR -186 76 29 1192 234 72 16 chr17 4106049 4106356 -81332124 + MER33 DNA MER1_type 1 324 0 320 311 116 66 chr17 4108318 4108620 -81329860 - L2 LINE L2 0 3313 2997 558 300 191 10 chr17 4108745 4109132 -81329348 - L2 LINE L2 -537 2777 2321 2282 89 0 7 chr17 4109937 4110241 -81328239 - AluSq SINE Alu -11 302 1 1688 186 0 0 chr17 4110242 4110551 -81327929 - AluJo SINE Alu 0 312 2 992 248 66 106 chr17 4113780 4114155 -81324325 + L1ME3A LINE L1 5690 6042 -128 2210 103 6 10 chr17 4114155 4114467 -81324013 - AluSq SINE Alu -2 311 1 992 248 66 106 chr17 4114467 4114592 -81323888 + L1ME3A LINE L1 6042 6170 0 359 299 86 0 chr17 4114719 4114836 -81323644 - MER5A DNA MER1_type -4 185 59 612 323 50 0 chr17 4115577 4115797 -81322683 + MIR SINE MIR 26 256 -6 213 39 0 0 chr17 4115869 4115895 -81322585 + (CA)n Simple_repeat Simple_repeat 1 26 0 215 227 0 0 chr17 4115917 4115961 -81322519 + (TTCA)n Simple_repeat Simple_repeat 2 45 0 634 241 59 18 chr17 4115962 4116132 -81322348 + MER5B DNA MER1_type 2 178 0 202 254 8 164 chr17 4116145 4116267 -81322213 + MER5B DNA MER1_type 17 119 -59 2225 104 0 3 chr17 4116274 4116572 -81321908 - AluSq SINE Alu -16 297 1 372 253 0 0 chr17 4116896 4116979 -81321501 - ERVL LTR ERVL -3757 2007 1925 824 77 0 0 chr17 4116988 4117092 -81321388 - AluSg/x SINE Alu -10 302 199 548 293 95 31 chr17 4117129 4117264 -81321216 + HERVL LTR ERVL 2333 2458 -3196 2091 94 18 0 chr17 4117264 4117623 -81320857 - AluSx SINE Alu 0 364 1 548 293 95 31 chr17 4117623 4117671 -81320809 + HERVL LTR ERVL 2458 2501 -3153 2217 121 0 0 chr17 4117671 4117976 -81320504 - AluSx SINE Alu -7 305 1 548 293 95 31 chr17 4117976 4118084 -81320396 + HERVL LTR ERVL 2501 2645 -3009 572 259 30 55 chr17 4118109 4118345 -81320135 + LTR67 LTR ERVL 328 557 0 2171 93 43 10 chr17 4118858 4119160 -81319320 - AluSx SINE Alu 0 312 1 207 0 0 0 chr17 4119170 4119193 -81319287 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 1367 94 0 6 chr17 4119215 4119396 -81319084 - AluSp SINE Alu -133 180 1 1504 213 94 43 chr17 4119470 4119982 -81318498 - LTR55 LTR ERV -10 538 1 1622 175 11 0 chr17 4120132 4120401 -81318079 - AluJo SINE Alu -4 308 37 2062 140 3 13 chr17 4120438 4120753 -81317727 - AluSx SINE Alu 0 312 1 2221 108 0 3 chr17 4120920 4121225 -81317255 - AluSx SINE Alu -5 307 4 265 143 200 0 chr17 4121252 4121322 -81317158 - MER105 DNA DNA 0 204 121 2108 107 3 10 chr17 4121718 4122017 -81316463 + AluSx SINE Alu 3 299 -13 649 268 49 0 chr17 4122048 4122272 -81316208 + L1MB2 LINE L1 5936 6170 -1 282 56 0 0 chr17 4122414 4122450 -81316030 + (TG)n Simple_repeat Simple_repeat 1 36 0 775 172 8 0 chr17 4123100 4123222 -81315258 - FLAM_C SINE Alu -18 125 3 210 37 0 0 chr17 4123253 4123280 -81315200 + (TA)n Simple_repeat Simple_repeat 2 28 0 2327 82 0 0 chr17 4123280 4123574 -81314906 - AluSg SINE Alu -16 294 1 23 33 0 0 chr17 4125195 4125225 -81313255 + AT_rich Low_complexity Low_complexity 1 30 0 2420 222 65 29 chr17 4125292 4125881 -81312599 - L1ME1 LINE L1 -108 6058 5435 795 88 0 0 chr17 4125881 4125994 -81312486 + (TG)n Simple_repeat Simple_repeat 2 114 0 2420 222 65 29 chr17 4125994 4126152 -81312328 - L1ME1 LINE L1 -731 5435 5284 819 149 0 0 chr17 4126152 4126286 -81312194 - AluSp/q SINE Alu -5 308 175 270 0 0 0 chr17 4127104 4127134 -81311346 + (TG)n Simple_repeat Simple_repeat 1 30 0 526 190 0 74 chr17 4127135 4127306 -81311174 - MIR SINE MIR -26 236 82 1585 115 27 103 chr17 4127821 4128152 -81310328 + AluYb8 SINE Alu 4 309 -9 206 264 217 39 chr17 4129049 4129178 -81309302 - L2 LINE L2 -219 3053 2902 1252 171 20 33 chr17 4329232 4329477 -81109003 - AluJo SINE Alu -70 242 1 798 328 85 32 chr17 4329499 4329996 -81108484 - L2 LINE L2 -1081 2233 1689 2185 108 0 20 chr17 4329996 4330301 -81108179 + AluSg SINE Alu 11 309 -1 798 328 85 32 chr17 4330301 4330483 -81107997 - L2 LINE L2 -1625 1689 1518 241 130 0 0 chr17 4330547 4330593 -81107887 + MADE1 DNA Mariner 1 46 -34 197 291 182 7 chr17 4330602 4330750 -81107730 - L2 LINE L2 -1897 1417 1244 330 146 0 0 chr17 4331063 4331111 -81107369 + AluSg/x SINE Alu 218 265 -37 21 0 0 0 chr17 4331214 4331235 -81107245 + AT_rich Low_complexity Low_complexity 1 21 0 304 333 103 10 chr17 4331509 4331713 -81106767 + L2 LINE L2 2847 3069 -244 2392 90 0 0 chr17 4331788 4332089 -81106391 + AluSx SINE Alu 1 301 -11 210 37 0 0 chr17 4332104 4332131 -81106349 + (TTG)n Simple_repeat Simple_repeat 3 29 0 180 195 73 0 chr17 4332759 4332800 -81105680 - L2 LINE L2 -3 3269 3226 548 212 78 60 chr17 4333417 4333634 -81104846 + L1MC4 LINE L1 5639 5859 -1949 979 248 125 21 chr17 4333634 4334135 -81104345 + L2 LINE L2 2509 3072 -241 288 0 0 0 chr17 4334135 4334167 -81104313 + (CA)n Simple_repeat Simple_repeat 1 32 0 1984 112 36 7 chr17 4334258 4334535 -81103945 + AluSg SINE Alu 1 285 -25 379 260 77 65 chr17 4334598 4334767 -81103713 + L2 LINE L2 3103 3273 -40 273 267 61 53 chr17 4334772 4334903 -81103577 + L1MD2 LINE L1 6198 6329 -30 366 333 0 0 chr17 4334911 4335001 -81103479 + L1MC4 LINE L1 6614 6703 -1339 339 298 48 0 chr17 4334959 4335043 -81103437 - L1MC4 LINE L1 -1339 6703 6616 * 1117 215 5 10 chr17 4335146 4335351 -81103129 - AluJo SINE Alu -108 204 1 1360 263 198 35 chr17 4335378 4335720 -81102760 + HAL1 LINE L1 126 411 -2096 1959 71 108 8 chr17 4335720 4335988 -81102492 + AluSx SINE Alu 1 295 -17 1360 263 198 35 chr17 4335988 4336010 -81102470 + HAL1 LINE L1 411 428 -2079 1554 170 99 7 chr17 4336010 4336293 -81102187 + AluJb SINE Alu 1 309 -3 1360 263 198 35 chr17 4336293 4336527 -81101953 + HAL1 LINE L1 428 823 -1684 1138 168 0 0 chr17 4336527 4336700 -81101780 - FRAM SINE Alu -6 170 1 287 247 35 0 chr17 4336703 4336788 -81101692 + HAL1 LINE L1 817 904 -1603 572 138 0 0 chr17 4336866 4336953 -81101527 + AluS SINE Alu 2 88 -224 2355 116 0 0 chr17 4337268 4337579 -81100901 + AluSx SINE Alu 1 311 -1 308 192 39 0 chr17 4337579 4337657 -81100823 + HAL1 LINE L1 2304 2384 -123 1035 150 63 77 chr17 4337666 4337715 -81100765 + AluJb SINE Alu 87 135 -177 2335 109 0 6 chr17 4337715 4338028 -81100452 + AluSx SINE Alu 1 311 -1 1035 150 63 77 chr17 4338028 4338185 -81100295 + AluJb SINE Alu 135 290 -22 396 203 144 25 chr17 4338190 4338308 -81100172 + HAL1 LINE L1 2376 2507 0 2240 119 7 0 chr17 4338336 4338662 -81099818 + AluSq SINE Alu 1 313 0 2429 99 0 0 chr17 4339056 4339358 -81099122 + AluSq SINE Alu 1 302 -11 2194 102 0 7 chr17 4339525 4339819 -81098661 + AluSx SINE Alu 1 292 -20 1597 194 113 100 chr17 4339973 4340095 -81098385 - L1MC4 LINE L1 -230 7812 7693 198 0 0 0 chr17 4340095 4340117 -81098363 + (CAA)n Simple_repeat Simple_repeat 2 23 0 1597 194 113 100 chr17 4340117 4340175 -81098305 - L1MC4 LINE L1 -349 7693 7637 1908 126 35 29 chr17 4340175 4340485 -81097995 - AluSx SINE Alu 0 312 1 1597 194 113 100 chr17 4340485 4340687 -81097793 - L1MC4 LINE L1 -405 7637 7439 713 124 7 103 chr17 4340687 4340832 -81097648 + FLAM_C SINE Alu 3 133 0 1597 194 113 100 chr17 4340832 4341075 -81097405 - L1MC4 LINE L1 -603 7439 7177 2485 288 64 47 chr17 4341150 4341304 -81097176 + L2 LINE L2 1882 2032 -1282 1767 175 10 10 chr17 4341304 4341613 -81096867 - AluJo SINE Alu -3 309 1 2485 288 64 47 chr17 4341613 4342494 -81095986 + L2 LINE L2 2032 2939 -375 1609 179 10 17 chr17 4342494 4342796 -81095684 - AluJo SINE Alu -12 300 1 2485 288 64 47 chr17 4342796 4342831 -81095649 + L2 LINE L2 2939 2972 -342 390 125 0 0 chr17 4342885 4342941 -81095539 + AluS SINE Alu 8 63 -237 185 261 134 0 chr17 4344045 4344164 -81094316 + L2 LINE L2 2723 2857 -457 232 283 248 25 chr17 4344308 4344626 -81093854 + L2 LINE L2 2879 3267 -46 2112 113 28 3 chr17 4345030 4345321 -81093159 + AluSq SINE Alu 1 298 -15 2240 119 3 0 chr17 4346971 4347266 -81091214 + AluSx SINE Alu 2 297 -15 208 150 25 0 chr17 4347425 4347465 -81091015 + (CCCCAG)n Simple_repeat Simple_repeat 6 46 0 363 23 0 0 chr17 4348365 4348409 -81090071 + (TG)n Simple_repeat Simple_repeat 2 45 0 186 191 0 0 chr17 4348427 4348469 -81090011 + (TG)n Simple_repeat Simple_repeat 2 43 0 309 100 0 0 chr17 4348499 4348549 -81089931 + (TG)n Simple_repeat Simple_repeat 2 51 0 357 62 0 0 chr17 4348585 4348633 -81089847 + (TG)n Simple_repeat Simple_repeat 2 49 0 251 293 13 0 chr17 4350057 4350132 -81088348 - MIR SINE MIR -8 254 179 2087 85 0 24 chr17 4350134 4350290 -81088190 - AluSx SINE Alu -14 288 141 2067 141 0 19 chr17 4350290 4350463 -81088017 - AluSx SINE Alu -6 306 140 2440 69 3 0 chr17 4350463 4350753 -81087727 - AluY SINE Alu -20 291 1 2067 141 0 19 chr17 4350753 4350891 -81087589 - AluSx SINE Alu -172 140 1 2087 85 0 24 chr17 4350891 4351029 -81087451 - AluSx SINE Alu -161 141 1 517 101 0 0 chr17 4351031 4351137 -81087343 + AluSg/x SINE Alu 214 319 0 575 232 73 6 chr17 4351137 4351301 -81087179 - MIR SINE MIR -87 175 1 241 247 34 22 chr17 4354099 4354188 -81084292 + (TCCA)n Simple_repeat Simple_repeat 2 91 0 196 296 163 10 chr17 4354188 4354286 -81084194 - L2 LINE L2 -28 3285 3173 485 104 0 0 chr17 4354436 4354513 -81083967 - Alu SINE Alu 0 311 235 6364 135 240 19 chr17 4354513 4355881 -81082599 + pTR5 LTR ERV1 748 2417 -21 346 190 76 0 chr17 4355892 4355971 -81082509 - AluSg/x SINE Alu -48 254 170 1358 129 177 12 chr17 4356249 4356497 -81081983 + AluSg SINE Alu 1 289 -11 2381 86 3 3 chr17 4356499 4356802 -81081678 + AluY SINE Alu 1 303 -8 739 196 14 0 chr17 4356803 4356946 -81081534 + AluJb SINE Alu 116 260 -52 808 364 62 44 chr17 4356947 4357759 -81080721 - L2 LINE L2 -15 3298 2474 2274 93 17 0 chr17 4357762 4358052 -81080428 + AluSx SINE Alu 1 295 -17 2419 61 3 10 chr17 4359045 4359341 -81079139 + AluSx SINE Alu 1 294 -18 302 221 13 39 chr17 4360296 4360373 -81078107 - L2 LINE L2 -3 3269 3195 298 310 87 45 chr17 4360418 4360742 -81077738 - L2 LINE L2 -195 3077 2746 280 329 65 29 chr17 4360737 4360907 -81077573 + L2 LINE L2 2426 2601 -713 * 1953 169 0 0 chr17 4361377 4361673 -81076807 - AluJb SINE Alu -16 296 1 333 278 87 24 chr17 4361995 4362121 -81076359 - L2 LINE L2 -5 3308 3175 464 299 13 32 chr17 4362251 4362405 -81076075 + L2 LINE L2 2597 2747 -567 207 0 0 0 chr17 4362794 4362817 -81075663 + (T)n Simple_repeat Simple_repeat 1 23 0 1782 149 25 38 chr17 4362852 4363167 -81075313 - AluJb SINE Alu -1 311 1 659 81 11 0 chr17 4363260 4363347 -81075133 - AluSq SINE Alu -125 188 101 2306 96 0 3 chr17 4363453 4363754 -81074726 - AluSg SINE Alu -10 300 1 1912 86 0 163 chr17 4363754 4364104 -81074376 - AluSg SINE Alu -17 293 1 188 33 0 33 chr17 4364105 4364135 -81074345 + (TTTTA)n Simple_repeat Simple_repeat 3 31 0 2028 117 0 28 chr17 4364135 4364425 -81074055 - AluSx SINE Alu -30 282 1 1234 187 49 49 chr17 4364427 4364753 -81073727 - L1MB7 LINE L1 -45 6139 5814 542 182 27 36 chr17 4364769 4364879 -81073601 - FLAM_A SINE Alu -33 109 1 1307 170 87 7 chr17 4364883 4364911 -81073569 - L1MB7 LINE L1 -356 5828 5804 2778 163 20 38 chr17 4364911 4365471 -81073009 + MER44D DNA MER2_type 1 605 0 1307 170 87 7 chr17 4365471 4365730 -81072750 - L1MB7 LINE L1 -380 5804 5518 395 247 17 98 chr17 4365734 4365771 -81072709 + L2 LINE L2 2991 3029 -284 2424 88 0 0 chr17 4365771 4366067 -81072413 - AluSq SINE Alu -17 296 1 395 247 17 98 chr17 4366067 4366264 -81072216 + L2 LINE L2 3029 3206 -107 2668 50 0 0 chr17 4366310 4366609 -81071871 - AluY SINE Alu -12 299 1 2191 127 0 0 chr17 4368064 4368355 -81070125 - AluSx SINE Alu -21 291 1 2717 145 12 79 chr17 4368365 4368771 -81069709 - L1PB3 LINE L1 -2 6152 5795 2179 97 4 4 chr17 4368771 4369049 -81069431 - AluSg SINE Alu -32 278 1 2717 145 12 79 chr17 4369049 4369223 -81069257 - L1PB3 LINE L1 -359 5795 5611 5959 194 22 13 chr17 4369228 4370428 -81068052 - L1MB7 LINE L1 -758 5388 4173 2125 143 0 3 chr17 4370428 4370742 -81067738 - AluSq SINE Alu 0 313 1 5959 194 22 13 chr17 4370742 4370909 -81067571 - L1MB7 LINE L1 -1973 4173 4009 382 292 106 0 chr17 4370973 4371086 -81067394 - L2 LINE L2 0 3272 3148 369 181 64 0 chr17 4371164 4371257 -81067223 - MER58 DNA MER1_type -232 109 1 422 86 0 0 chr17 4371273 4371343 -81067137 - AluY SINE Alu -7 302 233 1496 106 0 0 chr17 4371343 4371531 -81066949 - AluY SINE Alu -122 189 2 2079 153 3 0 chr17 4371726 4372034 -81066446 + AluSx SINE Alu 1 309 -3 2664 50 3 0 chr17 4372037 4372339 -81066141 + AluY SINE Alu 1 303 -8 1979 151 14 0 chr17 4373383 4373674 -81064806 - AluJb SINE Alu -17 295 1 21 0 0 0 chr17 4373692 4373713 -81064767 + AT_rich Low_complexity Low_complexity 1 21 0 2344 107 0 0 chr17 4373737 4374036 -81064444 - AluSc SINE Alu -10 299 1 1849 107 19 91 chr17 4374037 4374356 -81064124 - AluSx SINE Alu -16 296 1 2166 127 3 3 chr17 4374978 4375277 -81063203 + AluSx SINE Alu 1 299 -13 353 333 67 17 chr17 4375342 4375522 -81062958 - MIR SINE MIR -14 248 60 257 324 54 0 chr17 4375523 4375634 -81062846 + MER117 DNA MER1_type 26 142 -55 1478 156 5 9 chr17 4376299 4376523 -81061957 + AluSg/x SINE Alu 72 294 -18 897 171 29 0 chr17 4377079 4377219 -81061261 - FRAM SINE Alu -24 152 9 2390 95 0 3 chr17 4377463 4377759 -81060721 - AluSg SINE Alu -15 295 1 1780 139 63 21 chr17 4377759 4378046 -81060434 - AluJb SINE Alu -13 299 1 1154 209 60 38 chr17 4378046 4378362 -81060118 - Charlie4a DNA MER1_type -185 323 1 22 0 0 0 chr17 4381788 4381810 -81056670 + AT_rich Low_complexity Low_complexity 1 22 0 278 254 213 25 chr17 4381810 4381932 -81056548 - MIR SINE MIR -56 206 62 593 154 0 77 chr17 4383375 4383570 -81054910 + GA-rich Low_complexity Low_complexity 1 180 0 2067 120 10 0 chr17 4384950 4385250 -81053230 - AluSg SINE Alu -7 303 1 188 206 0 0 chr17 4385469 4385503 -81052977 - L2 LINE L2 -264 3049 3016 283 316 62 37 chr17 4385688 4385932 -81052548 - L1MC4 LINE L1 -104 7938 7689 267 295 67 9 chr17 4386029 4386134 -81052346 + L3 LINE CR1 157 267 -1310 22 0 0 0 chr17 4386305 4386327 -81052153 + AT_rich Low_complexity Low_complexity 1 22 0 286 319 121 28 chr17 4386512 4386760 -81051720 + L2 LINE L2 2690 2960 -354 1898 101 18 0 chr17 4386813 4387089 -81051391 + AluSx SINE Alu 15 295 -17 1503 120 4 21 chr17 4387982 4388044 -81050436 + AluSq SINE Alu 75 137 -176 2239 79 10 0 chr17 4388044 4388336 -81050144 + AluSx SINE Alu 1 295 -17 1503 120 4 21 chr17 4388336 4388515 -81049965 + AluSq SINE Alu 137 312 -1 338 273 167 0 chr17 4388741 4388873 -81049607 - MIR SINE MIR -62 200 47 186 191 0 0 chr17 4389465 4389507 -81048973 + (TAA)n Simple_repeat Simple_repeat 1 42 0 2051 90 11 4 chr17 4389830 4390137 -81048343 + AluSg SINE Alu 1 309 0 690 188 39 0 chr17 4390272 4390400 -81048080 + FLAM_C SINE Alu 1 133 0 238 200 0 0 chr17 4390659 4390704 -81047776 + L2 LINE L2 3267 3311 -2 1709 157 131 52 chr17 4391474 4391694 -81046786 - MER39 LTR ERV1 0 707 506 2201 88 14 0 chr17 4391694 4391988 -81046492 + AluSp SINE Alu 1 298 -15 1709 157 131 52 chr17 4391988 4392250 -81046230 - MER39 LTR ERV1 -201 506 5 371 281 10 97 chr17 4392368 4392564 -81045916 + MIR SINE MIR 25 203 -59 1904 102 11 0 chr17 4392753 4393018 -81045462 - AluSq SINE Alu -45 268 1 678 269 46 102 chr17 4393179 4393589 -81044891 - MLT1K LTR MaLR -26 562 176 1314 48 6 0 chr17 4393589 4393755 -81044725 - THE1C LTR MaLR 0 375 209 1113 67 0 0 chr17 4394055 4394190 -81044290 + AluSq/x SINE Alu 1 135 -177 2090 107 7 13 chr17 4394190 4394498 -81043982 + AluSx SINE Alu 1 306 -6 2168 129 8 38 chr17 4394707 4394843 -81043637 - L1PA16 LINE L1 0 6166 6028 2330 95 0 0 chr17 4394843 4395148 -81043332 - AluSx SINE Alu -7 305 1 2168 129 8 38 chr17 4395148 4395383 -81043097 - L1PA16 LINE L1 -138 6028 5806 445 286 70 66 chr17 4395420 4395586 -81042894 + MLT1J LTR MaLR 234 398 -113 189 0 0 0 chr17 4395586 4395607 -81042873 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 2101 92 0 7 chr17 4395609 4395893 -81042587 - AluSx SINE Alu -29 283 2 445 286 70 66 chr17 4395893 4395964 -81042516 + MLT1J LTR MaLR 398 475 -36 2148 105 23 3 chr17 4396137 4396443 -81042037 - AluSx SINE Alu 0 312 1 729 237 121 22 chr17 4396461 4396472 -81042008 + HsTC2 DNA Tc2 2 11 -1887 1554 117 121 23 chr17 4396472 4396736 -81041744 - AluSg SINE Alu -20 290 1 729 237 121 22 chr17 4396736 4396948 -81041532 + HsTC2 DNA Tc2 11 247 -1651 1502 214 21 8 chr17 4396954 4397333 -81041147 + L1M4 LINE L1 4375 4758 -1388 1068 165 114 111 chr17 4397334 4397653 -81040827 + AluJo SINE Alu 1 320 0 2143 97 13 13 chr17 4397662 4397971 -81040509 + AluSp SINE Alu 2 310 -3 1945 138 22 28 chr17 4397976 4398338 -81040142 + L1MC1 LINE L1 5918 6277 -56 969 113 0 0 chr17 4398338 4398471 -81040009 + AluSq/x SINE Alu 1 133 -179 222 118 0 0 chr17 4398471 4398505 -81039975 + (A)n Simple_repeat Simple_repeat 1 34 0 485 73 0 15 chr17 4398505 4398573 -81039907 + L1MC1 LINE L1 6261 6327 -6 1972 118 0 10 chr17 4398574 4398902 -81039578 + AluSx SINE Alu 1 312 0 574 209 201 14 chr17 4399031 4399316 -81039164 + HsTC2 DNA Tc2 1296 1811 -87 1987 131 0 0 chr17 4399316 4399626 -81038854 + AluSx SINE Alu 1 310 0 243 310 113 48 chr17 4399673 4399902 -81038578 - L2 LINE L2 -23 3290 3047 518 100 0 0 chr17 4400023 4400093 -81038387 + AluS SINE Alu 2 71 -241 273 57 0 0 chr17 4400587 4400622 -81037858 + (A)n Simple_repeat Simple_repeat 1 35 0 313 250 31 102 chr17 4400775 4400903 -81037577 - L2 LINE L2 -6 3307 3189 2345 68 0 3 chr17 4401080 4401374 -81037106 - AluSc SINE Alu -16 293 1 452 292 23 32 chr17 4401376 4401595 -81036885 - L1MC5 LINE L1 -429 7532 7316 280 325 155 48 chr17 4401598 4401717 -81036763 + L2 LINE L2 2809 2914 -358 2257 105 0 0 chr17 4401717 4402022 -81036458 - AluSq SINE Alu -8 305 1 280 325 155 48 chr17 4402022 4402314 -81036166 + L2 LINE L2 2914 3264 -8 279 330 80 18 chr17 4402633 4402745 -81035735 - L2 LINE L2 -4 3309 3191 854 241 108 56 chr17 4402747 4402857 -81035623 + MER58B DNA MER1_type 1 104 -2316 2261 58 0 21 chr17 4402857 4403148 -81035332 + AluY SINE Alu 17 301 -10 854 241 108 56 chr17 4403148 4403360 -81035120 + MER58B DNA MER1_type 104 340 -1 548 222 73 43 chr17 4403374 4403608 -81034872 - MER112 DNA MER1_type -12 248 8 726 139 47 47 chr17 4403608 4403737 -81034743 + FLAM_C SINE Alu 1 129 -4 356 259 9 19 chr17 4403851 4403959 -81034521 - L2 LINE L2 -196 3076 2970 2297 100 0 0 chr17 4403962 4404263 -81034217 + AluSg1 SINE Alu 2 302 -7 1324 102 5 0 chr17 4404564 4404751 -81033729 - AluSp SINE Alu -5 308 121 350 54 0 54 chr17 4404759 4404833 -81033647 + (TTTTG)n Simple_repeat Simple_repeat 1 70 0 1234 70 0 41 chr17 4404834 4405005 -81033475 - AluY SINE Alu -147 164 1 760 159 0 23 chr17 4405008 4405140 -81033340 - AluJo/FLAM SINE Alu -173 129 1 733 246 28 9 chr17 4405140 4405355 -81033125 - L1M4 LINE L1 -3371 2775 2557 711 259 118 4 chr17 4405503 4405731 -81032749 - MIR SINE MIR -3 259 6 2155 125 0 0 chr17 4405827 4406139 -81032341 - AluSx SINE Alu 0 312 1 1723 170 3 3 chr17 4406147 4406436 -81032044 - AluJb SINE Alu -23 289 1 2271 92 0 10 chr17 4406626 4406929 -81031551 + AluSx SINE Alu 2 301 -11 332 285 57 83 chr17 4406946 4407174 -81031306 + MIR SINE MIR 39 260 -2 1466 296 57 63 chr17 4407304 4407723 -81030757 + L2 LINE L2 107 527 -2787 2582 69 41 72 chr17 4407723 4408142 -81030338 - L1MA2 LINE L1 0 6304 5899 2055 117 3 13 chr17 4408142 4408451 -81030029 - AluSx SINE Alu -1 311 6 1466 296 57 63 chr17 4408451 4408951 -81029529 + L2 LINE L2 525 1021 -2293 1284 114 0 0 chr17 4408982 4409158 -81029322 - AluSx SINE Alu -136 176 1 201 363 22 22 chr17 4409172 4409263 -81029217 + L2 LINE L2 3222 3312 -1 1289 113 11 0 chr17 4409336 4409521 -81028959 + AluSp SINE Alu 1 187 -126 2165 101 13 7 chr17 4409785 4410092 -81028388 + AluSx SINE Alu 1 309 -3 233 213 85 11 chr17 4410229 4410323 -81028157 + L1MC5 LINE L1 7827 7927 -34 2361 77 0 0 chr17 4410339 4410636 -81027844 + AluSg SINE Alu 1 297 -13 310 229 9 48 chr17 4410643 4410748 -81027732 - MER113 DNA MER1_type? -417 104 4 240 226 0 0 chr17 4413365 4413427 -81025053 + GA-rich Low_complexity Low_complexity 2 63 0 718 255 128 30 chr17 4413712 4414010 -81024470 + MER102b DNA MER1_type 15 341 0 401 252 45 68 chr17 4415167 4415344 -81023136 + MIR3 SINE MIR 7 186 -75 1585 149 76 4 chr17 4415466 4415741 -81022739 + AluJb SINE Alu 1 295 -17 28 0 0 0 chr17 4418358 4418386 -81020094 + GC_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr17 4418453 4418474 -81020006 + GC_rich Low_complexity Low_complexity 1 21 0 1825 86 12 4 chr17 4418672 4418929 -81019551 - AluSq SINE Alu -8 305 47 848 49 0 0 chr17 4419369 4419471 -81019009 + AluS SINE Alu 1 102 -210 2242 92 3 0 chr17 4420042 4420347 -81018133 - AluY SINE Alu -5 306 1 29 0 0 0 chr17 4420417 4420446 -81018034 + AT_rich Low_complexity Low_complexity 1 29 0 578 157 10 0 chr17 4420528 4420630 -81017850 - AluJb SINE Alu 0 312 210 434 76 0 51 chr17 4420734 4420804 -81017676 + Alu SINE Alu 232 304 -7 2477 43 0 10 chr17 4420804 4421108 -81017372 + AluY SINE Alu 1 301 -10 607 148 157 0 chr17 4421110 4421225 -81017255 + FLAM_C SINE Alu 1 133 0 2046 108 10 3 chr17 4421230 4421526 -81016954 + AluSp SINE Alu 1 298 -15 2151 98 0 7 chr17 4421533 4421828 -81016652 + AluSq SINE Alu 1 293 -20 203 303 13 13 chr17 4421977 4422053 -81016427 + L2 LINE L2 3016 3091 -181 2244 66 0 10 chr17 4422241 4422555 -81015925 + AluSx SINE Alu 1 311 0 1665 135 13 50 chr17 4422695 4422998 -81015482 + AluJo SINE Alu 1 292 -20 316 325 33 26 chr17 4423069 4423220 -81015260 + L2 LINE L2 3150 3301 -12 2274 86 0 3 chr17 4423279 4423580 -81014900 + AluSc SINE Alu 1 300 -9 1007 208 13 22 chr17 4423651 4423882 -81014598 + AluJo SINE Alu 71 299 -13 1825 125 4 4 chr17 4423889 4424170 -81014310 + AluY SINE Alu 5 285 -26 31 0 0 0 chr17 4424170 4424201 -81014279 + AT_rich Low_complexity Low_complexity 1 31 0 915 142 0 0 chr17 4424233 4424374 -81014106 - AluJb SINE Alu -4 308 168 728 85 0 19 chr17 4424496 4424602 -81013878 + AluSp/q SINE Alu 198 301 -12 2220 89 3 13 chr17 4424944 4425300 -81013180 - AluY SINE Alu 0 353 1 2124 92 20 3 chr17 4425300 4425595 -81012885 - AluSp SINE Alu -13 300 1 26 50 0 0 chr17 4425648 4425688 -81012792 + AT_rich Low_complexity Low_complexity 1 40 0 1844 133 25 3 chr17 4425689 4425975 -81012505 - AluSx SINE Alu -20 292 1 562 71 0 36 chr17 4426007 4426091 -81012389 + AluJb SINE Alu 84 164 -148 2218 86 0 3 chr17 4426229 4426521 -81011959 - AluSc SINE Alu -14 295 5 1232 124 0 0 chr17 4427066 4427244 -81011236 - AluSc SINE Alu 0 309 132 2194 105 0 3 chr17 4427244 4427540 -81010940 - AluSp SINE Alu -18 295 1 1923 129 0 17 chr17 4427540 4427835 -81010645 - AluJb SINE Alu -12 300 11 281 321 94 31 chr17 4427835 4428147 -81010333 - L1ME LINE L1 -355 5809 5479 2063 76 6 51 chr17 4428156 4428471 -81010009 + AluSg SINE Alu 2 302 -8 238 162 0 0 chr17 4428532 4428569 -81009911 - MLT1B LTR MaLR 0 390 354 780 199 13 0 chr17 4428612 4428768 -81009712 - MLT1B LTR MaLR -41 349 192 2119 107 0 7 chr17 4430061 4430373 -81008107 - AluY SINE Alu -13 298 1 831 229 28 17 chr17 4430387 4430566 -81007914 + AluJb SINE Alu 131 311 -1 2221 107 10 0 chr17 4430587 4430896 -81007584 + AluSp SINE Alu 1 312 -1 323 128 0 0 chr17 4431338 4431385 -81007095 + AluSp/q SINE Alu 204 250 -53 1063 147 17 60 chr17 4431385 4431617 -81006863 + AluJo SINE Alu 85 306 -6 2280 74 0 0 chr17 4431632 4431915 -81006565 + AluSx SINE Alu 13 295 -17 494 339 23 6 chr17 4431935 4432106 -81006374 - MLT1K LTR MaLR -282 306 133 336 48 0 0 chr17 4432340 4432382 -81006098 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 2094 113 0 0 chr17 4432409 4432716 -81005764 - AluSq SINE Alu 0 309 3 1903 152 3 25 chr17 4433867 4434052 -81004428 - AluJb SINE Alu -4 308 131 2238 100 3 0 chr17 4434052 4434363 -81004117 - AluSx SINE Alu 0 312 1 1903 152 3 25 chr17 4434363 4434492 -81003988 - AluJb SINE Alu -181 131 1 2035 94 30 17 chr17 4435097 4435395 -81003085 + AluSx SINE Alu 5 306 -6 349 324 27 0 chr17 4435486 4435597 -81002883 + L2 LINE L2 3193 3306 -7 664 148 0 19 chr17 4435619 4435727 -81002753 + FRAM SINE Alu 62 167 -9 2281 103 3 0 chr17 4435785 4436095 -81002385 + AluSp SINE Alu 1 311 -2 311 347 134 14 chr17 4436119 4436420 -81002060 - L2 LINE L2 -228 3085 2741 2277 64 0 20 chr17 4436422 4436718 -81001762 - AluY SINE Alu -16 295 6 1896 232 96 45 chr17 4436764 4437021 -81001459 - L1ME3A LINE L1 -5 6165 5923 2033 84 24 14 chr17 4437021 4437308 -81001172 - AluSx SINE Alu -22 290 1 1896 232 96 45 chr17 4437308 4437447 -81001033 - L1ME3A LINE L1 -247 5923 5793 2177 124 0 6 chr17 4437447 4437761 -81000719 - AluSx SINE Alu 0 312 1 1896 232 96 45 chr17 4437761 4437988 -81000492 - L1ME3A LINE L1 -377 5793 5509 337 335 11 57 chr17 4438001 4438077 -81000403 - L2 LINE L2 -613 2701 2623 2152 111 3 0 chr17 4438077 4438384 -81000096 + AluSg SINE Alu 1 308 -2 337 335 11 57 chr17 4438384 4438483 -80999997 - L2 LINE L2 -691 2623 2534 1610 171 3 45 chr17 4438616 4438762 -80999718 + AluJo SINE Alu 1 129 -183 2201 95 3 0 chr17 4438762 4439057 -80999423 + AluSp SINE Alu 1 296 -17 1610 171 3 45 chr17 4439057 4439220 -80999260 + AluJo SINE Alu 129 297 -15 1674 169 28 0 chr17 4439492 4439776 -80998704 + AluJb SINE Alu 1 292 -20 2340 83 0 3 chr17 4439935 4440236 -80998244 + AluSc SINE Alu 1 300 -9 1620 182 30 0 chr17 4440315 4440612 -80997868 + AluJo SINE Alu 1 306 -6 2225 106 3 0 chr17 4441211 4441514 -80996966 - AluSp SINE Alu -9 304 1 254 300 56 0 chr17 4441549 4441639 -80996841 - MIR SINE MIR -70 192 98 1325 169 4 4 chr17 4442057 4442293 -80996187 + AluJo SINE Alu 1 236 -76 252 86 0 0 chr17 4442295 4442330 -80996150 + (A)n Simple_repeat Simple_repeat 1 35 0 1211 136 81 140 chr17 4442343 4442651 -80995829 + AluSq SINE Alu 2 291 -12 1859 144 6 13 chr17 4442661 4442974 -80995506 - AluSx SINE Alu -1 311 1 2040 91 63 0 chr17 4443251 4443537 -80994943 - AluSx SINE Alu -7 305 2 379 297 105 38 chr17 4444496 4444623 -80993857 - L2 LINE L2 -58 3255 3138 1712 139 49 7 chr17 4444623 4444910 -80993570 - AluJb SINE Alu -13 299 1 379 297 105 38 chr17 4444910 4445095 -80993385 - L2 LINE L2 -175 3138 2922 1958 136 7 3 chr17 4445212 4445514 -80992966 - AluJb SINE Alu -9 303 1 1910 143 17 0 chr17 4445631 4445924 -80992556 + AluSx SINE Alu 7 304 -8 2168 45 7 41 chr17 4446102 4446429 -80992051 + AluY SINE Alu 1 317 0 180 77 0 0 chr17 4447463 4447489 -80990991 + (CAG)n Simple_repeat Simple_repeat 3 28 0 562 267 53 16 chr17 4447707 4447894 -80990586 - MIR SINE MIR -3 259 66 2141 78 0 19 chr17 4448194 4448501 -80989979 - AluSc SINE Alu -8 301 1 1984 86 52 0 chr17 4448681 4448982 -80989498 - AluSx SINE Alu 0 315 1 245 347 116 0 chr17 4449049 4449170 -80989310 - L2 LINE L2 -1 3271 3137 226 247 340 0 chr17 4449178 4449275 -80989205 + L2 LINE L2 3141 3270 -2 1076 93 0 0 chr17 4449426 4449565 -80988915 + AluSg SINE Alu 1 139 -171 361 75 0 0 chr17 4449570 4449623 -80988857 + Alu SINE Alu 250 302 0 371 243 103 26 chr17 4449701 4449874 -80988606 - MIR SINE MIR -10 252 63 880 260 76 63 chr17 4451932 4452214 -80986266 + L2 LINE L2 2211 2503 -811 2341 93 0 0 chr17 4452214 4452526 -80985954 - AluSp SINE Alu -1 312 1 880 260 76 63 chr17 4452526 4452701 -80985779 + L2 LINE L2 2503 2674 -640 2210 107 0 13 chr17 4452742 4453059 -80985421 - AluSq SINE Alu 0 313 1 284 226 113 0 chr17 4453068 4453192 -80985288 - L1M4 LINE L1 -2191 3955 3818 1347 109 10 0 chr17 4453192 4453385 -80985095 - AluSg/x SINE Alu -9 301 107 338 23 0 0 chr17 4453385 4453428 -80985052 + AluSg/x SINE Alu 92 134 -166 741 231 64 0 chr17 4453428 4453584 -80984896 + AluJo/FRAM SINE Alu 137 302 0 2005 183 23 76 chr17 4453606 4453942 -80984538 + L1M4 LINE L1 3951 4246 -1900 1724 107 133 0 chr17 4453942 4454205 -80984275 + AluSg SINE Alu 1 298 -2 2005 183 23 76 chr17 4454205 4454437 -80984043 + L1M4 LINE L1 4246 4489 -1657 2113 110 10 0 chr17 4454437 4454737 -80983743 + AluSg SINE Alu 1 303 -7 269 23 0 70 chr17 4454751 4454794 -80983686 + (GAAAA)n Simple_repeat Simple_repeat 4 43 0 1562 171 19 20 chr17 4454795 4454948 -80983532 + L1M4 LINE L1 4741 4893 -1253 2284 65 10 19 chr17 4454948 4455256 -80983224 - AluY SINE Alu -5 306 2 1562 171 19 20 chr17 4455256 4455542 -80982938 + L1M4 LINE L1 4893 5308 -838 1774 98 0 8 chr17 4455543 4455788 -80982692 + AluSx SINE Alu 1 243 -69 2781 12 0 6 chr17 4455807 4456127 -80982353 + AluYb8 SINE Alu 1 318 0 783 151 22 29 chr17 4456132 4456271 -80982209 + FRAM SINE Alu 1 138 -38 1828 175 13 34 chr17 4456298 4456721 -80981759 + L1M4 LINE L1 5254 5667 -507 190 0 0 62 chr17 4456821 4456853 -80981627 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 1907 62 0 4 chr17 4456857 4457098 -80981382 - AluSg SINE Alu -37 273 34 2244 93 0 3 chr17 4458191 4458492 -80979988 + AluSx SINE Alu 1 300 -12 1343 187 37 23 chr17 4460390 4460562 -80977918 - AluJo SINE Alu -8 304 125 2068 138 0 0 chr17 4460562 4460874 -80977606 - AluSx SINE Alu 0 312 1 1343 187 37 23 chr17 4460874 4461001 -80977479 - AluJo SINE Alu -187 125 1 888 187 22 39 chr17 4461002 4461014 -80977466 - L1MC1 LINE L1 0 6333 6322 1946 103 4 0 chr17 4461014 4461277 -80977203 - AluSp SINE Alu -12 301 38 2223 94 0 7 chr17 4461277 4461576 -80976904 - AluSx SINE Alu -15 297 1 888 187 22 39 chr17 4461576 4461744 -80976736 - L1MC1 LINE L1 -9 6324 6155 691 279 67 41 chr17 4461744 4462059 -80976421 + L2 LINE L2 2974 3296 -17 818 202 5 58 chr17 4462785 4462895 -80975585 + MER45A DNA AcHobo 1 98 -1483 2209 82 10 0 chr17 4462895 4463188 -80975292 - AluY SINE Alu -15 296 1 818 202 5 58 chr17 4463188 4463265 -80975215 + MER45A DNA AcHobo 98 178 0 413 245 9 107 chr17 4464006 4464083 -80974397 - MIR SINE MIR -17 245 162 2118 102 3 7 chr17 4464083 4464378 -80974102 - AluSx SINE Alu -18 294 1 413 245 9 107 chr17 4464378 4464534 -80973946 - MIR SINE MIR -100 162 34 2451 65 0 7 chr17 4464576 4464885 -80973595 - AluY SINE Alu -4 307 1 1969 135 0 0 chr17 4464885 4465181 -80973299 - AluSx SINE Alu -16 296 1 2414 77 0 0 chr17 4465352 4465663 -80972817 - AluY SINE Alu 0 311 1 1926 97 56 3 chr17 4465755 4466043 -80972437 - AluSc SINE Alu -6 303 1 292 342 13 13 chr17 4466049 4466066 -80972414 - L1MA10 LINE L1 0 6334 6318 913 212 8 54 chr17 4466066 4466307 -80972173 - L1ME2 LINE L1 -9 6155 5926 2131 70 35 3 chr17 4466308 4466593 -80971887 + AluSp SINE Alu 1 294 -19 1307 117 187 44 chr17 4466602 4466829 -80971651 + AluJb SINE Alu 1 275 -37 2399 60 0 7 chr17 4466829 4467131 -80971349 + AluY SINE Alu 1 300 -11 1307 117 187 44 chr17 4467131 4467176 -80971304 + AluJb SINE Alu 275 312 0 1325 223 72 5 chr17 4467178 4467596 -80970884 + L1ME2 LINE L1 5326 5771 -393 365 314 116 0 chr17 4467648 4467769 -80970711 + L2 LINE L2 3137 3271 -1 25 75 0 0 chr17 4467934 4467987 -80970493 + GC_rich Low_complexity Low_complexity 1 53 0 21 57 0 0 chr17 4468169 4468204 -80970276 + GC_rich Low_complexity Low_complexity 1 35 0 36 77 0 0 chr17 4468234 4468312 -80970168 + GC_rich Low_complexity Low_complexity 1 78 0 23 0 0 0 chr17 4468698 4468721 -80969759 + GC_rich Low_complexity Low_complexity 1 23 0 1690 157 48 0 chr17 4469859 4470153 -80968327 - AluJo SINE Alu -4 308 1 2230 99 0 0 chr17 4471522 4471825 -80966655 + AluSq SINE Alu 1 303 -10 2100 62 87 3 chr17 4472448 4472737 -80965743 - AluSq SINE Alu 0 313 1 1376 170 33 33 chr17 4472974 4473274 -80965206 - AluJb SINE Alu -12 300 1 1185 111 0 0 chr17 4473281 4473443 -80965037 - AluSq SINE Alu -18 295 134 2160 120 0 0 chr17 4473443 4473752 -80964728 - AluSc SINE Alu 0 309 1 731 256 0 55 chr17 4473752 4473951 -80964529 + L1ME2 LINE L1 5925 6112 -52 2064 128 0 0 chr17 4474144 4474156 -80964324 - AluSx SINE Alu -15 297 286 195 69 0 0 chr17 4474156 4474185 -80964295 + (GTTTG)n Simple_repeat Simple_repeat 2 30 0 2064 128 0 0 chr17 4474185 4474469 -80964011 - AluSx SINE Alu -25 287 1 387 267 125 114 chr17 4474578 4474749 -80963731 - L1ME2 LINE L1 -368 5753 5585 2019 109 4 0 chr17 4474749 4475024 -80963456 + AluSx SINE Alu 13 288 -24 387 267 125 114 chr17 4475024 4475348 -80963132 - L1ME2 LINE L1 -536 5585 5251 344 268 39 4 chr17 4476223 4476459 -80962021 + (TGGA)n Simple_repeat Simple_repeat 1 244 0 2166 104 0 3 chr17 4477259 4477558 -80960922 + AluSx SINE Alu 1 298 -14 2178 91 0 7 chr17 4478540 4478836 -80959644 + AluSc SINE Alu 1 294 -15 2226 95 0 0 chr17 4478836 4479132 -80959348 + AluY SINE Alu 1 296 -15 1344 96 6 6 chr17 4480875 4481052 -80957428 + AluSq SINE Alu 1 177 -136 217 0 0 0 chr17 4481089 4481111 -80957369 + (TTG)n Simple_repeat Simple_repeat 1 22 -334 2412 72 10 0 chr17 4481111 4481403 -80957077 - AluSp SINE Alu -20 293 1 217 0 0 0 chr17 4481403 4481421 -80957059 + (TTG)n Simple_repeat Simple_repeat 21 356 0 217 0 0 0 chr17 4481421 4481445 -80957035 + (TTG)n Simple_repeat Simple_repeat 1 180 0 2121 98 40 0 chr17 4481445 4481716 -80956764 - AluSq SINE Alu -5 308 1 2556 46 7 3 chr17 4481733 4482035 -80956445 - AluY SINE Alu -8 303 1 2571 62 7 0 chr17 4482055 4482361 -80956119 - AluY SINE Alu -3 308 1 29 0 0 0 chr17 4482431 4482460 -80956020 + AT_rich Low_complexity Low_complexity 1 29 0 2051 154 3 3 chr17 4482542 4482854 -80955626 - AluJb SINE Alu 0 312 1 1821 103 96 21 chr17 4483220 4483501 -80954979 + AluSq SINE Alu 1 302 -11 1325 87 0 0 chr17 4483502 4483663 -80954817 + AluSq SINE Alu 134 294 -19 372 315 61 12 chr17 4484940 4485105 -80953375 + MIR SINE MIR 13 185 -77 302 277 107 9 chr17 4485102 4485214 -80953266 - L2 LINE L2 0 3313 3191 * 840 148 17 126 chr17 4485219 4485276 -80953204 - MER3 DNA MER1_type -3 206 144 2374 96 3 19 chr17 4485276 4485451 -80953029 - AluSx SINE Alu -3 309 140 2038 96 74 0 chr17 4485451 4485722 -80952758 - AluSg SINE Alu -17 293 3 2374 96 3 19 chr17 4485722 4485860 -80952620 - AluSx SINE Alu -172 140 1 840 148 17 126 chr17 4485860 4485907 -80952573 - MER3 DNA MER1_type -65 144 93 2368 92 3 13 chr17 4485907 4486211 -80952269 + AluSx SINE Alu 1 301 -11 840 148 17 126 chr17 4486211 4486335 -80952145 - MER3 DNA MER1_type -116 93 2 1897 162 11 0 chr17 4486480 4486758 -80951722 - AluJo SINE Alu -31 281 1 2396 109 0 6 chr17 4486769 4487081 -80951399 - AluSx SINE Alu -2 310 1 642 153 90 0 chr17 4487114 4487225 -80951255 + FLAM_A SINE Alu 1 121 -12 882 174 31 0 chr17 4487291 4487452 -80951028 - AluJo/FRAM SINE Alu 0 302 137 1944 138 7 16 chr17 4487452 4487757 -80950723 - AluJb SINE Alu -10 302 1 2550 65 10 3 chr17 4487765 4488074 -80950406 - AluSp SINE Alu 0 313 3 2351 100 7 0 chr17 4488106 4488415 -80950065 + AluY SINE Alu 1 311 0 2325 108 0 0 chr17 4488871 4489176 -80949304 - AluSg SINE Alu -5 305 1 423 181 252 0 chr17 4489312 4489439 -80949041 - MIR SINE MIR -13 249 91 2337 106 0 0 chr17 4489535 4489836 -80948644 - AluSx SINE Alu -11 301 1 217 311 78 57 chr17 4490024 4490268 -80948212 - L2 LINE L2 -188 3084 2836 778 228 0 0 chr17 4490274 4490432 -80948048 + FRAM SINE Alu 2 159 -7 2453 102 0 3 chr17 4490505 4490818 -80947662 - AluSx SINE Alu 0 312 1 2276 98 10 0 chr17 4490825 4491120 -80947360 - AluSp SINE Alu -15 298 1 590 143 151 0 chr17 4491120 4491239 -80947241 - FLAM_C SINE Alu -5 138 2 2622 43 0 10 chr17 4491242 4491546 -80946934 - AluY SINE Alu -10 301 1 2416 82 0 7 chr17 4491546 4491850 -80946630 - AluSx SINE Alu -9 303 1 281 149 0 0 chr17 4491853 4491900 -80946580 - AluSq/x SINE Alu -169 133 87 2204 106 0 3 chr17 4491901 4492185 -80946295 + AluSq SINE Alu 1 283 -30 258 56 0 0 chr17 4492277 4492313 -80946167 + (A)n Simple_repeat Simple_repeat 1 36 0 294 111 0 0 chr17 4492316 4492361 -80946119 - AluSq/x SINE Alu -199 104 60 1762 166 0 11 chr17 4492361 4492639 -80945841 + AluJb SINE Alu 22 296 -16 2657 61 0 0 chr17 4492643 4492954 -80945526 + AluY SINE Alu 1 311 0 431 276 41 8 chr17 4493192 4493315 -80945165 - MIR3 SINE MIR -17 191 65 262 226 21 75 chr17 4493901 4493994 -80944486 + GA-rich Low_complexity Low_complexity 3 90 0 2096 111 7 0 chr17 4496203 4496506 -80941974 + AluSx SINE Alu 1 305 0 341 298 118 0 chr17 4497374 4497535 -80940945 + MIR SINE MIR 57 236 -26 657 277 43 77 chr17 4497571 4497752 -80940728 + L2 LINE L2 3021 3190 -123 2176 108 0 29 chr17 4497752 4498058 -80940422 + AluSx SINE Alu 1 297 -15 657 277 43 77 chr17 4498058 4498176 -80940304 + L2 LINE L2 3190 3310 -3 2572 58 0 0 chr17 4499804 4500099 -80938381 - AluY SINE Alu -16 295 1 414 0 0 0 chr17 4500796 4500842 -80937638 + (TG)n Simple_repeat Simple_repeat 1 46 0 316 95 0 0 chr17 4500911 4500953 -80937527 + MER4E LTR ERV1 651 692 -74 2583 34 3 10 chr17 4502798 4503094 -80935386 + AluY SINE Alu 3 296 -15 2460 93 0 3 chr17 4504051 4504364 -80934116 + AluSx SINE Alu 1 312 0 660 224 105 53 chr17 4504492 4504720 -80933760 - MIR SINE MIR 0 262 23 2432 98 7 0 chr17 4504851 4505157 -80933323 - AluSx SINE Alu -4 308 1 1104 163 26 13 chr17 4505698 4505925 -80932555 - L1MB3 LINE L1 -1 6182 5953 2143 102 3 24 chr17 4506495 4506790 -80931690 - AluSx SINE Alu -15 297 9 812 204 7 0 chr17 4507538 4507690 -80930790 - FRAM SINE Alu -13 153 1 324 0 0 0 chr17 4508087 4508123 -80930357 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 858 152 65 0 chr17 4508123 4508261 -80930219 - AluSq SINE Alu -32 281 135 663 167 18 0 chr17 4508757 4508871 -80929609 + FLAM_C SINE Alu 2 117 -26 180 200 0 0 chr17 4508891 4508931 -80929549 + GA-rich Low_complexity Low_complexity 1 40 0 350 206 109 11 chr17 4509126 4509218 -80929262 + MIR SINE MIR 24 124 -138 2544 52 0 0 chr17 4509229 4509516 -80928964 - AluY SINE Alu -24 287 1 983 96 0 22 chr17 4509519 4509655 -80928825 - AluSq SINE Alu -180 133 1 421 198 62 0 chr17 4509656 4509752 -80928728 + MIR SINE MIR 113 214 -48 2384 77 3 3 chr17 4510430 4510729 -80927751 - AluSp SINE Alu -14 299 1 495 157 0 0 chr17 4510799 4510888 -80927592 - AluJ/FRAM SINE Alu -8 304 216 443 293 60 20 chr17 4510945 4511095 -80927385 + L2 LINE L2 3117 3272 0 286 327 96 0 chr17 4511213 4511369 -80927111 - L3b LINE CR1 -196 1387 1217 2439 97 3 0 chr17 4512575 4512884 -80925596 + AluSx SINE Alu 1 310 -2 383 192 0 67 chr17 4513625 4513818 -80924662 + (TGGG)n Simple_repeat Simple_repeat 1 180 0 258 95 0 0 chr17 4513979 4514021 -80924459 + (A)n Simple_repeat Simple_repeat 1 42 0 897 73 0 0 chr17 4514021 4514131 -80924349 - AluSq/x SINE Alu -202 110 1 1265 110 12 6 chr17 4514162 4514335 -80924145 + AluSg/x SINE Alu 138 311 -1 364 207 0 46 chr17 4514342 4514429 -80924051 - Tigger5 DNA MER2_type -2240 83 1 2130 124 0 3 chr17 4514842 4515165 -80923315 + AluSp SINE Alu 3 324 0 2430 99 0 0 chr17 4515566 4515879 -80922601 + AluSp SINE Alu 1 313 0 892 138 9 138 chr17 4515983 4516048 -80922432 - MER5A DNA MER1_type 0 189 117 2162 116 3 7 chr17 4516048 4516340 -80922140 + AluSx SINE Alu 1 291 -21 182 80 0 0 chr17 4516347 4516372 -80922108 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 892 138 9 138 chr17 4516372 4516515 -80921965 - MER5A DNA MER1_type -78 111 1 477 181 71 121 chr17 4516526 4516689 -80921791 + MER5B DNA MER1_type 4 159 -19 8094 53 2 15 chr17 4516689 4517668 -80920812 - LTR5 LTR ERVK -3 966 1 477 181 71 121 chr17 4517668 4517686 -80920794 + MER5B DNA MER1_type 159 176 -2 290 349 101 33 chr17 4517878 4518061 -80920419 - L2 LINE L2 -1968 1346 1132 2060 104 3 55 chr17 4518061 4518223 -80920257 - AluSg SINE Alu -17 293 153 2326 106 0 3 chr17 4518223 4518525 -80919955 - AluSg SINE Alu -3 307 7 2060 104 3 55 chr17 4518525 4518671 -80919809 - AluSg SINE Alu -157 153 1 290 349 101 33 chr17 4518671 4518794 -80919686 - L2 LINE L2 -2182 1132 1019 2214 80 0 32 chr17 4519154 4519466 -80919014 + AluSq SINE Alu 1 302 -11 2297 80 3 16 chr17 4519472 4519784 -80918696 + AluSp SINE Alu 1 308 -5 194 319 42 0 chr17 4519802 4519874 -80918606 - L2 LINE L2 -356 2958 2884 276 282 13 13 chr17 4521195 4521273 -80917207 - L2 LINE L2 -9 3263 3186 1584 134 90 43 chr17 4521301 4521578 -80916902 + AluJb SINE Alu 1 290 -22 2197 105 0 13 chr17 4521824 4522128 -80916352 + AluSx SINE Alu 1 300 -12 249 353 29 29 chr17 4522237 4522376 -80916104 - MLT1L LTR MaLR -287 328 190 608 199 12 53 chr17 4522516 4522687 -80915793 - Charlie2 DNA MER1_type -7 2855 2692 1425 98 36 22 chr17 4523164 4523389 -80915091 - AluY SINE Alu 0 311 84 435 324 28 28 chr17 4523464 4523643 -80914837 + Charlie2 DNA MER1_type 1 179 -2603 2104 115 0 16 chr17 4523644 4523981 -80914499 - AluY SINE Alu 0 311 3 86 103 0 0 chr17 4524061 4524333 -80914147 + GC_rich Low_complexity Low_complexity 1 272 0 329 234 120 53 chr17 4524563 4524710 -80913770 + L1M4 LINE L1 4469 4636 -1510 1990 101 8 0 chr17 4524710 4524967 -80913513 - AluSp SINE Alu -18 295 37 329 234 120 53 chr17 4524967 4525028 -80913452 + L1M4 LINE L1 4636 4691 -1455 2456 48 35 7 chr17 4525060 4525349 -80913131 + AluY SINE Alu 1 297 -14 1872 153 0 0 chr17 4525349 4525623 -80912857 - AluSx SINE Alu -37 275 1 302 289 13 0 chr17 4525795 4525871 -80912609 - LTR67 LTR ERVL -380 177 101 1937 108 0 0 chr17 4525945 4526196 -80912284 + AluSg SINE Alu 54 304 -6 602 319 72 17 chr17 4526260 4526552 -80911928 + L2 LINE L2 1121 1428 -1886 248 222 42 0 chr17 4526580 4526652 -80911828 + L2 LINE L2 1541 1615 -1699 1954 133 3 10 chr17 4526652 4526945 -80911535 - AluSg SINE Alu -19 291 1 399 138 0 0 chr17 4526983 4527041 -80911439 - AluS SINE Alu -250 58 1 * 663 240 58 0 chr17 4527041 4527192 -80911288 + MER20 DNA MER1_type 55 214 -5 2303 213 111 27 chr17 4527318 4527430 -80911050 - L1M4 LINE L1 -871 5275 5174 2285 116 6 0 chr17 4527430 4527741 -80910739 - AluSp SINE Alu 0 313 1 2303 213 111 27 chr17 4527741 4528216 -80910264 - L1M4 LINE L1 -972 5174 4609 2057 133 7 0 chr17 4528216 4528509 -80909971 + AluSq SINE Alu 1 295 -18 2303 213 111 27 chr17 4528509 4528671 -80909809 - L1M4 LINE L1 -1537 4609 4462 2435 96 0 0 chr17 4528673 4528976 -80909504 - AluSc SINE Alu -4 305 3 459 281 6 18 chr17 4528979 4529143 -80909337 - AluSq SINE Alu -5 308 147 264 217 103 69 chr17 4529509 4529684 -80908796 + Charlie7 DNA MER1_type 508 688 -1924 1365 169 110 0 chr17 4529827 4530063 -80908417 - AluJo SINE Alu -17 295 34 240 234 0 0 chr17 4530079 4530126 -80908354 + L2 LINE L2 3255 3301 -12 2361 99 0 3 chr17 4530128 4530431 -80908049 + AluSq SINE Alu 1 302 -11 2477 154 20 18 chr17 4530431 4530886 -80907594 + LTR62 LTR ERVK 262 717 -2 459 252 25 0 chr17 4531060 4531179 -80907301 - AluSq/x SINE Alu -189 123 2 1537 176 20 36 chr17 4531255 4531556 -80906924 - AluSx SINE Alu -16 296 1 330 257 37 37 chr17 4531677 4531786 -80906694 - MIR SINE MIR 0 262 154 2036 128 44 3 chr17 4531831 4532129 -80906351 - AluSg SINE Alu 0 310 1 2212 119 7 3 chr17 4532139 4532441 -80906039 - AluSx SINE Alu -9 303 1 2397 69 0 3 chr17 4532519 4532810 -80905670 + AluY SINE Alu 4 293 -18 197 302 32 0 chr17 4533167 4533230 -80905250 + L2 LINE L2 2714 2778 -536 2308 89 27 0 chr17 4533236 4533528 -80904952 + AluSx SINE Alu 1 300 -12 917 122 0 0 chr17 4534725 4534848 -80903632 + AluSq/x SINE Alu 11 133 -179 2344 100 0 0 chr17 4534851 4535160 -80903320 + AluY SINE Alu 1 309 -2 244 256 44 22 chr17 4535161 4535251 -80903229 + Charlie2 DNA MER1_type 219 310 -2552 1481 172 4 32 chr17 4535324 4535603 -80902877 - AluJb SINE Alu -24 288 18 275 246 111 40 chr17 4535611 4535737 -80902743 + Charlie2 DNA MER1_type 1931 2065 -797 2011 108 45 7 chr17 4536066 4536353 -80902127 + AluSp SINE Alu 1 298 -15 622 242 31 25 chr17 4536363 4536524 -80901956 - MER5B DNA MER1_type 0 178 17 2234 100 4 0 chr17 4536641 4536960 -80901520 - AluSx SINE Alu 0 320 1 2798 13 0 13 chr17 4537063 4537374 -80901106 - AluYa5 SINE Alu -4 307 1 2064 121 0 29 chr17 4537848 4538155 -80900325 - AluSx SINE Alu -14 298 1 2395 83 0 7 chr17 4538178 4538478 -80900002 - AluY SINE Alu -13 298 1 2522 77 0 3 chr17 4539533 4539845 -80898635 - AluY SINE Alu 0 311 1 1991 134 10 3 chr17 4539895 4540187 -80898293 - AluJo SINE Alu -9 303 10 639 256 152 61 chr17 4540332 4540793 -80897687 - LTR33 LTR ERVL -9 512 10 669 326 74 47 chr17 4540834 4541282 -80897198 + L2 LINE L2 2183 2642 -672 320 78 0 0 chr17 4541308 4541359 -80897121 - AluY SINE Alu -169 132 82 1549 107 9 5 chr17 4541359 4541575 -80896905 - AluY SINE Alu -94 217 1 860 269 70 60 chr17 4541945 4542443 -80896037 - MLT1J LTR MaLR -8 503 1 1627 181 0 21 chr17 4542502 4542790 -80895690 - AluJo SINE Alu -30 282 1 294 283 55 7 chr17 4543120 4543265 -80895215 + L1M4 LINE L1 4776 4927 -1219 1997 143 7 7 chr17 4543507 4543801 -80894679 - AluSx SINE Alu -13 299 6 802 117 23 8 chr17 4544083 4544211 -80894269 - AluJb SINE Alu -7 305 176 926 154 7 20 chr17 4546028 4546177 -80892303 - FRAM SINE Alu -12 164 18 743 203 0 8 chr17 4547089 4547207 -80891273 - FLAM_C SINE Alu -25 118 2 545 269 110 28 chr17 4547312 4547494 -80890986 + MIR3 SINE MIR 9 205 -3 579 224 165 72 chr17 4547551 4547648 -80890832 - MIR SINE MIR -2 260 173 452 184 39 0 chr17 4547648 4547751 -80890729 - L1MB8 LINE L1 0 6178 6072 579 224 165 72 chr17 4547751 4547890 -80890590 - MIR SINE MIR -89 173 2 2725 48 0 3 chr17 4551088 4551401 -80887079 + AluSx SINE Alu 1 312 0 1930 81 0 53 chr17 4551412 4551734 -80886746 + AluSg SINE Alu 5 309 -1 2441 91 0 3 chr17 4551891 4552199 -80886281 + AluSx SINE Alu 3 309 -3 2123 87 45 7 chr17 4552934 4553223 -80885257 + AluSp SINE Alu 2 301 -12 312 339 73 60 chr17 4553506 4553890 -80884590 + L2 LINE L2 2864 3252 -20 614 238 144 5 chr17 4553894 4554096 -80884384 - L1MEc LINE L1 -5955 441 212 1296 116 50 5 chr17 4554104 4554303 -80884177 + AluJb SINE Alu 1 208 -104 570 235 73 45 chr17 4554355 4554534 -80883946 - L1MEc LINE L1 -6174 222 39 1913 170 7 0 chr17 4554542 4554842 -80883638 - AluJb SINE Alu -10 302 1 2524 74 0 7 chr17 4555013 4555322 -80883158 - AluSq SINE Alu -2 311 5 27 0 0 0 chr17 4555332 4555359 -80883121 + AT_rich Low_complexity Low_complexity 1 27 0 451 312 57 6 chr17 4555532 4555689 -80882791 + MIR SINE MIR 24 188 -74 194 369 138 22 chr17 4556037 4556392 -80882088 + L2 LINE L2 2490 2885 -429 344 191 286 19 chr17 4556403 4556508 -80881972 - FLAM_A SINE Alu 0 133 1 366 244 0 52 chr17 4556509 4556624 -80881856 + MER63 DNA MER1_type 7 741 -321 542 176 29 114 chr17 4556767 4556840 -80881640 + LTR41 LTR ERVL 580 658 -115 1744 161 0 34 chr17 4556840 4557138 -80881342 - AluJb SINE Alu -24 288 1 2050 116 0 36 chr17 4557148 4557450 -80881030 - AluSx SINE Alu -21 291 1 542 176 29 114 chr17 4557450 4557575 -80880905 + LTR41 LTR ERVL 667 771 -2 818 162 0 22 chr17 4557636 4557772 -80880708 + FLAM_C SINE Alu 1 133 0 2414 61 14 3 chr17 4557872 4558169 -80880311 + AluY SINE Alu 1 300 -11 2191 109 0 10 chr17 4558181 4558483 -80879997 + AluSc SINE Alu 1 299 -10 2650 61 0 0 chr17 4560067 4560377 -80878103 + AluY SINE Alu 2 311 0 2149 95 20 10 chr17 4560503 4560797 -80877683 - AluSx SINE Alu -15 297 1 303 252 47 65 chr17 4560923 4561030 -80877450 + L1MDa LINE L1 1984 2088 -4452 265 208 56 14 chr17 4561668 4561740 -80876740 - MIR SINE MIR -75 187 113 232 83 83 21 chr17 4562042 4562090 -80876390 + LTR41 LTR ERVL 711 761 -12 2097 110 0 20 chr17 4562867 4563167 -80875313 - AluSx SINE Alu -18 294 1 1195 151 31 109 chr17 4563708 4564319 -80874161 - MER4C LTR ERV1 0 465 1 1466 131 17 37 chr17 4565429 4565726 -80872754 - AluY SINE Alu -1 310 20 226 121 0 0 chr17 4565765 4565798 -80872682 + Alu SINE Alu 92 124 -179 344 266 41 0 chr17 4565937 4566176 -80872304 + G-rich Low_complexity Low_complexity 1 248 0 296 204 58 29 chr17 4566180 4566352 -80872128 + (GTGTG)n Simple_repeat Simple_repeat 4 180 0 1865 106 4 34 chr17 4567784 4568049 -80870431 + AluSq SINE Alu 1 257 -56 2537 68 0 0 chr17 4568064 4568360 -80870120 + AluY SINE Alu 1 296 -15 2355 68 41 0 chr17 4568360 4568655 -80869825 + AluY SINE Alu 1 307 -4 1424 124 0 16 chr17 4568655 4568849 -80869631 + AluSq SINE Alu 108 298 -15 2206 123 0 3 chr17 4570318 4570627 -80867853 - AluSx SINE Alu -4 308 1 1596 107 0 30 chr17 4571317 4571550 -80866930 - AluSg/x SINE Alu 0 312 87 2376 80 0 0 chr17 4572389 4572675 -80865805 + AluSq SINE Alu 25 310 -3 2245 119 3 0 chr17 4574357 4574659 -80863821 - AluSx SINE Alu -9 303 1 905 173 33 75 chr17 4575058 4575232 -80863248 + MIR SINE MIR 23 188 -74 2423 83 3 0 chr17 4575232 4575532 -80862948 + AluSx SINE Alu 1 301 -11 905 173 33 75 chr17 4575532 4575571 -80862909 + MIR SINE MIR 188 227 -35 1818 179 3 10 chr17 4575614 4575916 -80862564 + AluJo SINE Alu 5 304 -8 551 302 148 0 chr17 4576435 4576637 -80861843 + MIR SINE MIR 27 258 -4 2319 81 3 0 chr17 4576640 4576948 -80861532 - AluSx SINE Alu 0 309 1 2436 81 3 0 chr17 4576977 4577274 -80861206 + AluSp SINE Alu 1 298 -15 2386 82 0 3 chr17 4577301 4577593 -80860887 + AluSq SINE Alu 1 291 -22 212 303 13 13 chr17 4577744 4577820 -80860660 + L2 LINE L2 3016 3091 -181 2362 66 0 10 chr17 4578008 4578322 -80860158 + AluSx SINE Alu 1 311 0 1817 136 13 46 chr17 4578462 4578764 -80859716 + AluJo SINE Alu 1 292 -20 351 234 85 11 chr17 4578874 4578968 -80859512 + L2 LINE L2 3182 3282 -31 2404 86 0 3 chr17 4579045 4579346 -80859134 + AluSc SINE Alu 1 300 -9 186 296 155 0 chr17 4579346 4579417 -80859063 - MIR SINE MIR -116 146 65 1095 204 13 22 chr17 4579417 4579648 -80858832 + AluJo SINE Alu 71 299 -13 2180 75 4 4 chr17 4579654 4579966 -80858514 + AluY SINE Alu 4 315 0 978 141 0 0 chr17 4579998 4580140 -80858340 - AluJb SINE Alu -3 309 168 832 176 8 0 chr17 4580227 4580358 -80858122 + FLAM_C SINE Alu 1 132 -1 2052 113 7 39 chr17 4580377 4580687 -80857793 + AluSx SINE Alu 1 300 -12 2737 172 62 26 chr17 4580690 4580831 -80857649 - L1MA4 LINE L1 -11 6289 6155 2270 125 0 0 chr17 4580831 4581136 -80857344 - AluSx SINE Alu -7 305 1 2737 172 62 26 chr17 4581136 4581603 -80856877 - L1MA4 LINE L1 -145 6155 5659 1099 168 0 22 chr17 4581597 4581776 -80856704 - AluJb SINE Alu -4 308 134 * 1239 169 15 140 chr17 4581604 4581776 -80856704 - AluJo SINE Alu -1 301 109 198 0 0 0 chr17 4581776 4581798 -80856682 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 2278 81 0 3 chr17 4581798 4582083 -80856397 - AluY SINE Alu -27 284 1 1239 169 15 140 chr17 4582083 4582297 -80856183 - AluJo SINE Alu -191 111 2 1699 148 10 30 chr17 4582086 4582105 -80856375 - AluJb SINE Alu 0 312 294 415 0 0 0 chr17 4582105 4582151 -80856329 + (TTTA)n Simple_repeat Simple_repeat 2 120 0 1699 148 10 30 chr17 4582151 4582435 -80856045 - AluJb SINE Alu -18 294 2 987 144 0 0 chr17 4582435 4582608 -80855872 - L1MA4 LINE L1 -634 5666 5494 313 128 0 169 chr17 4582609 4582761 -80855719 - Alu SINE Alu 0 302 236 2286 84 0 16 chr17 4582761 4583070 -80855410 - AluY SINE Alu -7 304 1 189 0 0 0 chr17 4583072 4583093 -80855387 + (T)n Simple_repeat Simple_repeat 1 21 0 804 140 0 44 chr17 4583100 4583236 -80855244 - AluJb SINE Alu -182 130 1 443 99 33 0 chr17 4583236 4583327 -80855153 - L1MA4 LINE L1 -812 5488 5395 3762 152 18 47 chr17 4583334 4583401 -80855079 - L1MB7 LINE L1 0 6184 6117 2112 137 0 6 chr17 4583401 4583714 -80854766 + AluJb SINE Alu 1 311 -1 3762 152 18 47 chr17 4583714 4584034 -80854446 - L1MB7 LINE L1 -67 6117 5825 1574 170 0 74 chr17 4584034 4584370 -80854110 - AluJo SINE Alu -1 311 1 3762 152 18 47 chr17 4584370 4584711 -80853769 - L1MB7 LINE L1 -359 5825 5476 720 155 0 0 chr17 4584730 4584833 -80853647 - FRAM SINE Alu -37 139 37 481 95 0 0 chr17 4584833 4584907 -80853573 + L1M4 LINE L1 5415 5488 -690 2022 128 7 3 chr17 4584907 4585205 -80853275 + AluSx SINE Alu 1 299 -13 848 142 8 0 chr17 4585215 4585349 -80853131 + AluJ SINE Alu 1 135 -177 2172 99 14 3 chr17 4585349 4585642 -80852838 + AluSg SINE Alu 1 296 -14 2061 141 0 3 chr17 4586465 4586778 -80851702 - AluSx SINE Alu 0 312 1 241 294 76 22 chr17 4586798 4586890 -80851590 - MIR3 SINE MIR -52 156 60 184 311 54 27 chr17 4588012 4588086 -80850394 + MIR3 SINE MIR 110 185 -23 829 216 6 0 chr17 4588184 4588346 -80850134 + AluJ SINE Alu 134 296 -16 2132 111 7 0 chr17 4588349 4588646 -80849834 + AluSp SINE Alu 1 299 -14 2074 128 0 0 chr17 4588655 4588953 -80849527 - AluY SINE Alu -13 298 1 1906 151 7 3 chr17 4589667 4589966 -80848514 + AluJo SINE Alu 4 303 -9 365 345 14 20 chr17 4590443 4590591 -80847889 - MIR SINE MIR 0 262 116 2589 43 0 0 chr17 4590665 4590968 -80847512 - AluY SINE Alu -8 303 1 2053 107 40 3 chr17 4593146 4593445 -80845035 - AluSx SINE Alu -2 310 1 2348 58 0 3 chr17 4593476 4593768 -80844712 + AluY SINE Alu 1 291 -20 1140 259 22 13 chr17 4595438 4595697 -80842783 - MER58B DNA MER1_type -2079 341 77 2325 95 0 0 chr17 4595697 4596001 -80842479 + AluSx SINE Alu 1 304 -8 1140 259 22 13 chr17 4596001 4596054 -80842426 - MER58B DNA MER1_type -2343 77 26 2292 87 0 3 chr17 4596064 4596362 -80842118 - AluSg SINE Alu -13 297 1 2203 87 0 31 chr17 4596375 4596696 -80841784 - AluY SINE Alu 0 311 1 928 95 0 29 chr17 4596888 4597025 -80841455 - AluSq/x SINE Alu -180 133 1 246 32 0 0 chr17 4600529 4600560 -80837920 + (CAG)n Simple_repeat Simple_repeat 1 31 0 2116 85 0 0 chr17 4600815 4601086 -80837394 + AluSx SINE Alu 24 294 -18 1988 113 23 17 chr17 4601211 4601513 -80836967 + AluSg SINE Alu 1 304 -6 2267 71 3 22 chr17 4601547 4601858 -80836622 - AluSp SINE Alu -8 305 1 271 295 0 0 chr17 4602502 4602607 -80835873 + (CAG)n Simple_repeat Simple_repeat 1 105 0 330 301 9 44 chr17 4602641 4602900 -80835580 + CT-rich Low_complexity Low_complexity 1 249 0 275 293 20 14 chr17 4602931 4603078 -80835402 + CT-rich Low_complexity Low_complexity 1 148 0 309 100 0 0 chr17 4603464 4603514 -80834966 + (CAG)n Simple_repeat Simple_repeat 3 52 0 297 75 0 0 chr17 4604044 4604084 -80834396 + (CA)n Simple_repeat Simple_repeat 2 41 0 321 309 118 22 chr17 4604814 4604950 -80833530 + MIR SINE MIR 40 188 -74 321 341 40 8 chr17 4607659 4607785 -80830695 - MIR SINE MIR -59 149 20 21 0 0 0 chr17 4612018 4612039 -80826441 + GC_rich Low_complexity Low_complexity 1 21 0 26 50 0 0 chr17 4612169 4612209 -80826271 + GC_rich Low_complexity Low_complexity 1 40 0 2223 76 0 7 chr17 4616727 4617015 -80821465 - AluSc SINE Alu -23 286 1 969 159 0 69 chr17 4617031 4617220 -80821260 - FRAM SINE Alu 0 176 1 397 231 58 70 chr17 4617222 4617378 -80821102 - MER5A DNA MER1_type 0 189 36 217 217 43 0 chr17 4617627 4617673 -80820807 - MIR SINE MIR -92 170 123 1680 133 13 53 chr17 4618125 4618426 -80820054 + AluJo SINE Alu 1 289 -23 2304 88 0 3 chr17 4618436 4618733 -80819747 + AluSx SINE Alu 1 296 -16 687 138 0 4 chr17 4619327 4619467 -80819013 + L1M LINE L1 5278 5413 -741 584 159 0 37 chr17 4619469 4619576 -80818904 + FLAM_A SINE Alu 40 142 0 337 179 13 0 chr17 4619582 4619660 -80818820 + AluSp/q SINE Alu 225 303 0 2727 88 21 0 chr17 4619663 4620093 -80818387 + L1MA1 LINE L1 5755 6193 -109 2425 45 3 16 chr17 4620140 4620449 -80818031 + AluY SINE Alu 1 305 -6 954 133 0 0 chr17 4620618 4620753 -80817727 + AluSq/x SINE Alu 1 135 -177 1927 112 24 7 chr17 4620753 4621049 -80817431 + AluSg SINE Alu 1 301 -9 887 131 0 5 chr17 4621536 4621941 -80816539 + (CA)n Simple_repeat Simple_repeat 1 402 0 1987 93 29 0 chr17 4622227 4622507 -80815973 - AluSx SINE Alu -11 301 14 260 207 52 60 chr17 4622628 4622744 -80815736 + MLT1K LTR MaLR 188 302 -286 2517 44 0 0 chr17 4623005 4623303 -80815177 + AluY SINE Alu 5 302 -9 982 154 5 53 chr17 4623303 4623491 -80814989 + AluSg/x SINE Alu 132 310 0 839 183 0 0 chr17 4623505 4623647 -80814833 + FLAM_C SINE Alu 1 142 -1 670 91 0 0 chr17 4623670 4623758 -80814722 + AluS SINE Alu 1 88 -225 188 143 24 0 chr17 4624200 4624242 -80814238 + GA-rich Low_complexity Low_complexity 5 47 0 2248 106 3 0 chr17 4624398 4624709 -80813771 + AluSx SINE Alu 1 312 0 2347 88 3 0 chr17 4625037 4625343 -80813137 + AluSx SINE Alu 1 307 -5 1240 174 9 30 chr17 4625355 4625585 -80812895 - AluJo SINE Alu -46 266 42 2041 114 16 7 chr17 4625699 4626005 -80812475 - AluSc SINE Alu 0 309 1 1970 115 61 0 chr17 4626020 4626315 -80812165 - AluSp SINE Alu 0 313 1 671 148 16 41 chr17 4626355 4626477 -80812003 + FLAM_C SINE Alu 11 129 -14 2078 115 27 0 chr17 4626508 4626803 -80811677 + AluSx SINE Alu 1 303 -9 1610 179 18 4 chr17 4627360 4627670 -80810810 - AluJb SINE Alu 0 314 1 2072 117 3 0 chr17 4627682 4627997 -80810483 - AluSx SINE Alu 0 316 1 1818 145 0 26 chr17 4628000 4628310 -80810170 - AluSx SINE Alu -10 302 1 241 216 39 0 chr17 4628325 4628376 -80810104 - MER66B LTR ERV1 -143 343 291 2551 203 71 50 chr17 4628410 4628452 -80810028 + L1MC4 LINE L1 7181 7221 -821 2129 81 7 42 chr17 4628452 4628760 -80809720 + AluSq SINE Alu 1 297 -16 2551 203 71 50 chr17 4628760 4629560 -80808920 + L1MC4 LINE L1 7221 8041 -1 1573 180 13 28 chr17 4629632 4629949 -80808531 - AluJb SINE Alu 0 312 1 255 275 72 14 chr17 4629969 4630107 -80808373 + L1ME LINE L1 5727 5872 -298 1615 148 35 4 chr17 4630109 4630365 -80808115 + AluSx SINE Alu 1 264 -48 1345 161 17 25 chr17 4630810 4630879 -80807601 + AluJo SINE Alu 52 120 -196 2221 101 0 0 chr17 4630879 4631176 -80807304 - AluSq SINE Alu -16 297 1 1345 161 17 25 chr17 4631176 4631373 -80807107 + AluJo SINE Alu 120 316 0 632 330 87 78 chr17 4631488 4631560 -80806920 + L1MEc LINE L1 2242 2312 -3903 2069 113 3 0 chr17 4631560 4631843 -80806637 + AluSx SINE Alu 1 284 -28 933 67 8 0 chr17 4631723 4631843 -80806637 + AluSg/x SINE Alu 162 317 0 316 0 0 0 chr17 4631843 4631878 -80806602 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 632 330 87 78 chr17 4631878 4631942 -80806538 + L1MEc LINE L1 2312 2374 -3841 2127 85 41 10 chr17 4631942 4632236 -80806244 + AluSq SINE Alu 3 305 -8 632 330 87 78 chr17 4632236 4632404 -80806076 + L1MEc LINE L1 2374 2510 -3705 1396 224 94 34 chr17 4632404 4632875 -80805605 + MLT1D LTR MaLR 1 386 -4 536 343 29 0 chr17 4632880 4633055 -80805425 + L1MEc LINE L1 2504 2683 -3532 1605 173 61 0 chr17 4633133 4633411 -80805069 + AluJb SINE Alu 1 295 -17 933 129 58 7 chr17 4633448 4633603 -80804877 + AluJb SINE Alu 114 276 -36 1399 173 24 45 chr17 4633603 4633624 -80804856 - MLT2D LTR ERVL -25 389 369 183 100 0 0 chr17 4633624 4633654 -80804826 + (CA)n Simple_repeat Simple_repeat 2 31 0 1399 173 24 45 chr17 4633654 4633967 -80804513 - MLT2D LTR ERVL -45 369 62 1047 177 21 0 chr17 4633987 4634173 -80804307 - AluSg/x SINE Alu -1 311 122 455 142 19 47 chr17 4634173 4634279 -80804201 - L1MDa LINE L1 -6437 103 1 554 143 0 0 chr17 4634286 4634377 -80804103 - FLAM_C SINE Alu -2 141 51 421 93 0 53 chr17 4634439 4634514 -80803966 + MLT2C2 LTR ERVL 1 71 -393 1973 143 20 0 chr17 4634514 4634814 -80803666 + AluSx SINE Alu 1 306 -6 919 115 0 8 chr17 4634822 4634952 -80803528 + AluSq/x SINE Alu 1 129 -184 2291 97 7 0 chr17 4634953 4635263 -80803217 + AluSx SINE Alu 1 312 0 1172 150 0 0 chr17 4635320 4635500 -80802980 - AluSq SINE Alu 0 313 134 1457 159 29 84 chr17 4635500 4635657 -80802823 - AluJo SINE Alu -10 302 169 2500 52 0 13 chr17 4635657 4635964 -80802516 + AluY SINE Alu 1 303 -8 1457 159 29 84 chr17 4635964 4636115 -80802365 - AluJo SINE Alu -143 169 11 2007 184 8 31 chr17 4636140 4636265 -80802215 - L1PB4 LINE L1 0 6156 6030 2138 95 27 0 chr17 4636265 4636559 -80801921 - AluSx SINE Alu -10 302 1 2007 184 8 31 chr17 4636559 4636814 -80801666 - L1PB4 LINE L1 -126 6030 5785 2316 102 0 6 chr17 4636830 4637144 -80801336 - AluSx SINE Alu 0 312 1 858 171 0 38 chr17 4637155 4637313 -80801167 - FRAM SINE Alu -24 152 1 232 103 0 0 chr17 4637315 4637354 -80801126 - L1PB4 LINE L1 -522 5780 5742 2246 90 3 3 chr17 4637781 4638080 -80800400 - AluSc SINE Alu -9 300 2 2857 9 0 0 chr17 4638098 4638416 -80800064 - AluYb8 SINE Alu 0 318 1 1825 136 3 53 chr17 4638448 4638820 -80799660 + AluJb SINE Alu 5 360 0 2160 76 9 54 chr17 4638843 4639159 -80799321 + AluSx SINE Alu 1 302 -10 4818 96 0 85 chr17 4639475 4639920 -80798560 - LTR8 LTR ERV1 -1 690 334 2305 85 7 0 chr17 4639920 4640227 -80798253 - AluSx SINE Alu -1 311 3 4818 96 0 85 chr17 4640227 4640535 -80797945 - LTR8 LTR ERV1 -357 334 1 845 167 0 0 chr17 4640563 4640701 -80797779 - AluJb SINE Alu -6 306 169 1523 171 4 29 chr17 4640701 4640981 -80797499 + AluJb SINE Alu 40 312 0 2516 40 0 10 chr17 4641014 4641316 -80797164 - AluY SINE Alu -12 299 1 268 268 80 62 chr17 4641317 4641541 -80796939 + L1 LINE L1 3526 3753 -2393 1941 117 4 0 chr17 4641541 4641814 -80796666 + AluSp SINE Alu 1 274 -39 1185 124 119 0 chr17 4641815 4642017 -80796463 + AluSc SINE Alu 71 296 -13 968 278 27 113 chr17 4642340 4642607 -80795873 - L2 LINE L2 -196 3076 2788 1956 127 3 7 chr17 4642607 4642907 -80795573 - AluSq SINE Alu -14 299 1 968 278 27 113 chr17 4642907 4643062 -80795418 - L2 LINE L2 -484 2788 2621 1564 157 7 18 chr17 4643062 4643336 -80795144 + AluJo SINE Alu 1 271 -41 1629 103 0 4 chr17 4643338 4643570 -80794910 + AluSg/x SINE Alu 81 311 -1 968 278 27 113 chr17 4643570 4644075 -80794405 - L2 LINE L2 -652 2620 2152 1058 106 0 0 chr17 4644076 4644217 -80794263 + AluSq/x SINE Alu 2 142 -171 483 323 127 26 chr17 4644220 4644618 -80793862 - L2 LINE L2 -1160 2154 1709 2226 71 17 14 chr17 4644618 4644913 -80793567 - AluSp SINE Alu -17 296 1 483 323 127 26 chr17 4644913 4644941 -80793539 - L2 LINE L2 -1605 1709 1685 207 280 60 24 chr17 4646604 4646772 -80791708 + (CCCCAA)n Simple_repeat Simple_repeat 3 176 0 337 313 43 0 chr17 4647633 4647796 -80790684 + L1ME4a LINE L1 5950 6119 -2 2255 108 0 0 chr17 4647802 4648109 -80790371 + AluSx SINE Alu 1 307 -5 1720 163 3 3 chr17 4648114 4648403 -80790077 + AluJb SINE Alu 1 289 -23 248 286 0 16 chr17 4653943 4654006 -80784474 + CT-rich Low_complexity Low_complexity 4 65 0 400 263 76 35 chr17 4654233 4654404 -80784076 + MIR SINE MIR 68 245 -17 229 62 0 0 chr17 4654459 4654491 -80783989 + Alu SINE Alu 1 32 -268 1672 112 0 0 chr17 4654491 4654723 -80783757 + AluSg/x SINE Alu 74 305 -5 687 117 0 100 chr17 4656395 4656515 -80781965 + AluJb SINE Alu 1 108 -204 1524 187 11 0 chr17 4656520 4656798 -80781682 + AluJb SINE Alu 27 307 -5 193 303 131 7 chr17 4659171 4659316 -80779164 - MIR3 SINE MIR -21 187 25 22 56 0 0 chr17 4660757 4660793 -80777687 + GC_rich Low_complexity Low_complexity 1 36 0 23 78 0 0 chr17 4661743 4661794 -80776686 + GC_rich Low_complexity Low_complexity 1 51 0 258 238 33 25 chr17 4662769 4662891 -80775589 + G-rich Low_complexity Low_complexity 2 124 0 1989 104 7 31 chr17 4664953 4665125 -80773355 - AluSx SINE Alu 0 305 142 2276 32 72 0 chr17 4665125 4665404 -80773076 - AluY SINE Alu -12 299 1 1989 104 7 31 chr17 4665404 4665543 -80772937 - AluSx SINE Alu -163 142 1 230 250 107 0 chr17 4666252 4666336 -80772144 - L2 LINE L2 -5 3267 3175 1055 194 38 13 chr17 4667070 4667307 -80771173 + MIR SINE MIR 19 261 -1 476 219 64 97 chr17 4667301 4667414 -80771066 - MIR SINE MIR -27 235 130 * 2153 79 59 0 chr17 4667414 4667704 -80770776 + AluSg SINE Alu 1 307 -3 476 219 64 97 chr17 4667704 4667807 -80770673 - MIR SINE MIR -132 130 25 591 64 86 0 chr17 4668567 4668707 -80769773 + (TCTCTG)n Simple_repeat Simple_repeat 1 152 0 1122 148 0 0 chr17 4670161 4670337 -80768143 + FRAM SINE Alu 1 175 -1 2498 58 3 3 chr17 4670565 4670874 -80767606 + AluSp SINE Alu 1 309 -4 738 310 15 5 chr17 4670889 4671089 -80767391 - MIR SINE MIR -42 220 19 1593 150 27 60 chr17 4671093 4671393 -80767087 - AluJo SINE Alu -22 290 1 817 165 15 0 chr17 4671393 4671526 -80766954 - AluJo SINE Alu -177 135 1 2194 111 0 3 chr17 4671567 4671873 -80766607 + AluSx SINE Alu 1 305 -7 274 323 54 31 chr17 4673755 4673794 -80764686 - L2 LINE L2 -3 3269 3232 1759 118 56 59 chr17 4673794 4673957 -80764523 - MER44D DNA MER2_type -1883 608 446 2304 84 7 0 chr17 4673957 4674254 -80764226 + AluSq SINE Alu 1 299 -14 2335 76 0 32 chr17 4674255 4674570 -80763910 + AluY SINE Alu 1 305 -6 1759 118 56 59 chr17 4674570 4674743 -80763737 - MER44D DNA MER2_type -2044 447 1 274 323 54 31 chr17 4674743 4674833 -80763647 - L2 LINE L2 -40 3232 3137 2223 103 0 3 chr17 4674896 4675196 -80763284 - AluSx SINE Alu -13 299 1 1139 164 5 55 chr17 4675198 4675417 -80763063 - AluJb SINE Alu -21 291 84 338 102 17 0 chr17 4675425 4675484 -80762996 - AluSg SINE Alu 0 301 242 1032 85 0 0 chr17 4675487 4675616 -80762864 - AluSg SINE Alu -168 142 14 798 229 40 63 chr17 4675623 4675846 -80762634 - AluJo SINE Alu -92 220 3 1367 165 189 0 chr17 4675892 4676146 -80762334 + AluJo SINE Alu 1 302 0 187 286 0 0 chr17 4676166 4676215 -80762265 - L2 LINE L2 -75 3238 3190 2446 79 0 0 chr17 4676233 4676538 -80761942 - AluSg SINE Alu -5 305 1 460 188 47 0 chr17 4676784 4676869 -80761611 + AluJ/FLAM SINE Alu 3 91 -221 2535 52 0 0 chr17 4677137 4677442 -80761038 - AluY SINE Alu -6 305 1 2053 94 3 14 chr17 4677520 4677684 -80760796 - AluSx SINE Alu -14 298 137 2322 87 0 10 chr17 4677684 4677994 -80760486 - AluSp SINE Alu -6 307 1 2053 94 3 14 chr17 4677994 4678117 -80760363 - AluSx SINE Alu -175 137 14 215 214 36 0 chr17 4678138 4678194 -80760286 + L2 LINE L2 2926 2983 -289 290 276 69 26 chr17 4678296 4678412 -80760068 + L2 LINE L2 3168 3288 -25 1667 155 10 39 chr17 4678441 4678608 -80759872 - AluJb SINE Alu -12 300 130 384 22 0 0 chr17 4678608 4678653 -80759827 + (TTTA)n Simple_repeat Simple_repeat 4 48 0 2174 64 0 0 chr17 4678653 4678919 -80759561 - AluSc SINE Alu -30 279 14 1667 155 10 39 chr17 4678919 4679059 -80759421 - AluJb SINE Alu -180 132 1 333 269 48 58 chr17 4679112 4679216 -80759264 + MIR SINE MIR 4 106 -156 1520 171 45 21 chr17 4684140 4684426 -80754054 - AluJo SINE Alu -19 293 1 1990 148 7 0 chr17 4684466 4684770 -80753710 - AluSx SINE Alu -6 306 1 302 383 82 27 chr17 4687999 4688255 -80750225 + L1M4c LINE L1 935 1204 -5180 266 243 66 44 chr17 4688735 4688788 -80749692 + L1ME4a LINE L1 5983 6033 -88 2349 90 0 0 chr17 4688788 4689087 -80749393 - AluSx SINE Alu -13 299 1 266 243 66 44 chr17 4689087 4689169 -80749311 + L1ME4a LINE L1 6033 6121 0 2128 122 0 6 chr17 4689198 4689510 -80748970 + AluSx SINE Alu 1 310 -2 1101 178 66 5 chr17 4690652 4690849 -80747631 + MER3 DNA MER1_type 1 209 0 384 347 18 24 chr17 4690955 4691125 -80747355 - MIR3 SINE MIR -23 185 17 334 299 0 11 chr17 4691464 4691551 -80746929 - L2 LINE L2 0 3272 3187 539 327 125 11 chr17 4691576 4691857 -80746623 - L3 LINE CR1 -74 1503 1191 2448 68 10 0 chr17 4692010 4692319 -80746161 + AluSq SINE Alu 1 312 -1 216 163 0 0 chr17 4692685 4692728 -80745752 + G-rich Low_complexity Low_complexity 5 47 0 2319 71 3 10 chr17 4696067 4696364 -80742116 - AluSq SINE Alu -16 297 3 2153 124 0 0 chr17 4696366 4696665 -80741815 - AluSx SINE Alu -13 299 1 2283 68 0 0 chr17 4696724 4697030 -80741450 - AluY SINE Alu 0 307 2 2245 87 7 0 chr17 4697520 4697818 -80740662 + AluSg SINE Alu 1 300 -10 1250 88 0 0 chr17 4697818 4697977 -80740503 + AluSp SINE Alu 134 292 -21 428 360 7 7 chr17 4697980 4698133 -80740347 + MIR SINE MIR 89 241 -21 2291 100 0 0 chr17 4698204 4698505 -80739975 - AluSx SINE Alu -11 301 1 957 90 298 6 chr17 4703297 4703381 -80735099 + MER30 DNA MER1_type 1 59 -171 2288 76 0 16 chr17 4703381 4703685 -80734795 + AluSq SINE Alu 1 299 -14 2281 89 10 0 chr17 4703695 4703999 -80734481 - AluSq SINE Alu -6 307 1 957 90 298 6 chr17 4703999 4704081 -80734399 + MER30 DNA MER1_type 65 230 0 905 284 251 15 chr17 4704289 4704807 -80733673 + L2 LINE L2 2057 2696 -618 467 240 34 17 chr17 4704812 4704991 -80733489 + L1MC5 LINE L1 7744 7925 -36 2049 123 10 7 chr17 4705063 4705365 -80733115 - AluJo SINE Alu -9 303 1 288 77 0 0 chr17 4705398 4705437 -80733043 + (TCCCC)n Simple_repeat Simple_repeat 4 42 0 191 105 53 0 chr17 4705444 4705482 -80732998 + CT-rich Low_complexity Low_complexity 1 40 0 874 220 0 0 chr17 4705496 4705655 -80732825 - FRAM SINE Alu -17 159 1 2231 107 0 0 chr17 4705661 4705961 -80732519 - AluSq SINE Alu -13 300 1 2247 94 7 0 chr17 4705961 4706259 -80732221 - AluSp SINE Alu -13 300 1 2296 65 3 3 chr17 4706259 4706549 -80731931 - AluY SINE Alu -21 290 1 2389 89 0 0 chr17 4706549 4706853 -80731627 - AluSx SINE Alu -8 304 1 605 271 90 0 chr17 4706855 4707043 -80731437 + L2 LINE L2 3109 3313 0 2390 89 0 0 chr17 4707291 4707595 -80730885 + AluSg SINE Alu 1 304 -6 2135 105 7 0 chr17 4707705 4707999 -80730481 + AluSx SINE Alu 1 296 -16 831 152 0 23 chr17 4708294 4708426 -80730054 + AluJo/FLAM SINE Alu 1 129 -173 2402 86 0 3 chr17 4708429 4708742 -80729738 + AluSp SINE Alu 1 312 -1 1672 151 37 27 chr17 4708884 4709182 -80729298 + AluJb SINE Alu 1 301 -11 2211 75 51 0 chr17 4709182 4709476 -80729004 + AluSx SINE Alu 1 310 -2 227 283 7 36 chr17 4710650 4710788 -80727692 + C-rich Low_complexity Low_complexity 1 134 0 26 50 0 0 chr17 4710798 4710838 -80727642 + GC_rich Low_complexity Low_complexity 1 40 0 223 333 11 11 chr17 4714369 4714459 -80724021 + MIR3 SINE MIR 3 92 -116 488 298 136 5 chr17 4714574 4714772 -80723708 + MIR SINE MIR 4 227 -35 426 296 84 28 chr17 4714963 4715142 -80723338 + MIR SINE MIR 33 221 -41 2223 98 0 31 chr17 4715810 4716128 -80722352 - AluSx SINE Alu -4 308 1 528 325 211 12 chr17 4717903 4718509 -80719971 + L3 LINE CR1 652 1378 -199 1478 92 0 0 chr17 4718509 4718704 -80719776 - AluSc SINE Alu -12 297 103 2193 96 3 0 chr17 4718706 4718997 -80719483 + AluSx SINE Alu 1 292 -20 700 156 18 0 chr17 4719007 4719116 -80719364 - AluSq/x SINE Alu -201 111 1 2211 89 10 0 chr17 4719126 4719417 -80719063 - AluSx SINE Alu -18 294 1 467 333 41 31 chr17 4719423 4719618 -80718862 + L3 LINE CR1 1374 1570 -7 194 347 0 0 chr17 4720791 4720866 -80717614 - L2 LINE L2 -227 3045 2971 203 254 15 60 chr17 4720917 4720984 -80717496 + L2 LINE L2 3249 3312 -1 2009 129 3 3 chr17 4721965 4722259 -80716221 - AluSg SINE Alu -16 294 1 2302 86 3 0 chr17 4722288 4722589 -80715891 + AluY SINE Alu 1 302 -9 1995 134 3 3 chr17 4722708 4723007 -80715473 - AluSx SINE Alu -13 299 1 601 257 87 52 chr17 4723022 4723248 -80715232 - L1MC4a LINE L1 -302 5819 5597 2461 38 3 0 chr17 4723248 4723539 -80714941 + AluY SINE Alu 1 292 -19 601 257 87 52 chr17 4723539 4723584 -80714896 - L1MC4a LINE L1 -524 5597 5555 1328 81 0 0 chr17 4723594 4723766 -80714714 - AluY SINE Alu -14 297 126 483 277 43 5 chr17 4723771 4723959 -80714521 - L1MC4a LINE L1 -2252 5556 5362 654 246 129 26 chr17 4727282 4727514 -80710966 + MIR SINE MIR 4 259 -3 2326 83 3 6 chr17 4728051 4728365 -80710115 - AluSp SINE Alu 0 313 1 2257 93 7 13 chr17 4728365 4728674 -80709806 - AluSx SINE Alu -1 311 4 1957 94 80 0 chr17 4728922 4729197 -80709283 - AluSx SINE Alu -15 297 1 1118 74 0 0 chr17 4729197 4729332 -80709148 - AluSg SINE Alu -175 135 1 2163 105 7 7 chr17 4729408 4729704 -80708776 + AluSx SINE Alu 6 301 -11 2470 45 3 16 chr17 4730072 4730384 -80708096 - AluY SINE Alu -3 308 1 398 277 53 71 chr17 4730472 4730654 -80707826 - MIR SINE MIR -30 178 1 2080 154 0 0 chr17 4730750 4731062 -80707418 - AluJb SINE Alu 0 312 1 393 302 18 62 chr17 4731124 4731166 -80707314 + L2 LINE L2 3099 3141 -172 2041 76 6 111 chr17 4731166 4731509 -80706971 + AluSp SINE Alu 1 307 -6 393 302 18 62 chr17 4731509 4731691 -80706789 + L2 LINE L2 3141 3313 0 222 309 52 41 chr17 4732174 4732271 -80706209 + L2 LINE L2 3161 3258 -14 235 282 28 0 chr17 4733867 4733938 -80704542 + MER113 DNA MER1_type? 7 79 -442 2249 85 10 10 chr17 4733951 4734257 -80704223 - AluSx SINE Alu -6 306 1 1723 159 3 10 chr17 4734263 4734558 -80703922 - AluJo SINE Alu -14 298 6 260 321 291 0 chr17 4734604 4734769 -80703711 - MIR SINE MIR -4 258 46 492 288 82 6 chr17 4735629 4735799 -80702681 + MER5A DNA MER1_type 7 189 0 2183 80 3 23 chr17 4735814 4736114 -80702366 - AluSc SINE Alu -15 294 1 310 302 19 44 chr17 4737528 4737687 -80700793 - L1ME3 LINE L1 -2 6160 6006 1394 114 144 23 chr17 4737718 4737981 -80700499 - AluSx SINE Alu -17 295 1 2146 73 7 23 chr17 4738343 4738645 -80699835 + AluY SINE Alu 1 297 -14 301 333 66 44 chr17 4739337 4739550 -80698930 + L1M4 LINE L1 3073 3293 -2853 1486 159 97 21 chr17 4739550 4739840 -80698640 + AluJo SINE Alu 1 312 0 301 333 66 44 chr17 4739840 4739854 -80698626 + L1M4 LINE L1 3293 3305 -2841 1000 77 14 43 chr17 4739883 4740092 -80698388 - AluSc SINE Alu -15 294 1 560 187 93 0 chr17 4740131 4740238 -80698242 + MLT1B LTR MaLR 1 117 -273 1673 88 0 4 chr17 4740239 4740467 -80698013 + AluSp SINE Alu 87 313 0 1617 194 0 3 chr17 4741223 4741516 -80696964 + AluJo SINE Alu 11 302 -10 1849 137 6 16 chr17 4741762 4742077 -80696403 + AluSx SINE Alu 1 312 0 652 144 0 45 chr17 4742157 4742268 -80696212 + AluSq/x SINE Alu 2 107 -205 2161 82 0 23 chr17 4742838 4743142 -80695338 + AluY SINE Alu 1 297 -14 1609 154 34 17 chr17 4743779 4744077 -80694403 + AluJb SINE Alu 1 303 -9 765 155 14 63 chr17 4744123 4744265 -80694215 + AluJo SINE Alu 2 136 -176 366 246 45 128 chr17 4744347 4744434 -80694046 - MIR SINE MIR -52 210 117 1989 107 0 17 chr17 4744434 4744753 -80693727 - AluSx SINE Alu 0 314 1 680 195 31 8 chr17 4744755 4744883 -80693597 - FLAM_A SINE Alu -2 131 1 366 246 45 128 chr17 4744883 4744970 -80693510 - MIR SINE MIR -146 116 47 1371 157 101 18 chr17 4745026 4745312 -80693168 + AluJo SINE Alu 1 310 -2 2047 112 0 16 chr17 4745823 4746128 -80692352 - AluSq SINE Alu -13 300 1 1697 178 3 13 chr17 4746134 4746437 -80692043 - AluJb SINE Alu 0 312 13 2114 92 0 7 chr17 4746450 4746770 -80691710 - AluSc SINE Alu 0 318 1 2184 82 23 7 chr17 4747343 4747649 -80690831 + AluSx SINE Alu 1 311 -1 1547 189 23 7 chr17 4747846 4748031 -80690449 - AluJo SINE Alu 0 312 119 189 0 0 0 chr17 4748031 4748052 -80690428 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 1547 189 23 7 chr17 4748052 4748173 -80690307 - AluJo SINE Alu -193 119 1 472 233 178 25 chr17 4748267 4748430 -80690050 + MIR SINE MIR 31 218 -44 2064 90 0 10 chr17 4748531 4748810 -80689670 + AluSg SINE Alu 4 281 -29 201 74 0 0 chr17 4748810 4748837 -80689643 + (CAAG)n Simple_repeat Simple_repeat 1 27 0 274 213 52 29 chr17 4749034 4749170 -80689310 + (CGGGG)n Simple_repeat Simple_repeat 5 143 0 2120 57 4 18 chr17 4749530 4749809 -80688671 + AluSg SINE Alu 3 277 -33 1897 111 0 14 chr17 4752398 4752715 -80685765 + AluSx SINE Alu 1 313 0 1181 198 16 108 chr17 4753087 4753401 -80685079 - AluJb SINE Alu -16 286 2 1950 89 58 14 chr17 4753428 4753721 -80684759 - AluSq SINE Alu -7 306 1 2396 71 0 3 chr17 4753794 4754103 -80684377 - AluSx SINE Alu -4 308 1 257 264 0 0 chr17 4754155 4754208 -80684272 + MER58B DNA MER1_type 35 87 -254 831 199 55 0 chr17 4754209 4754390 -80684090 - AluJo SINE Alu -1 311 121 800 175 13 7 chr17 4754416 4754570 -80683910 + AluJb SINE Alu 158 312 0 1144 157 0 68 chr17 4754572 4754633 -80683847 + MER58B DNA MER1_type 115 179 -2241 2050 103 3 26 chr17 4754633 4754935 -80683545 + AluSx SINE Alu 1 295 -17 1144 157 0 68 chr17 4754935 4755109 -80683371 + MER58B DNA MER1_type 179 334 -7 330 301 89 8 chr17 4755112 4755235 -80683245 + L2 LINE L2 3180 3312 -1 2401 58 0 10 chr17 4755308 4755618 -80682862 - AluY SINE Alu -4 307 1 750 244 0 12 chr17 4755644 4755808 -80682672 + FRAM SINE Alu 1 162 -14 246 308 33 33 chr17 4755808 4755899 -80682581 - MIR SINE MIR -155 107 17 2028 92 4 0 chr17 4755969 4756241 -80682239 - AluSx SINE Alu -39 273 1 1796 171 0 3 chr17 4756639 4756937 -80681543 - AluJo SINE Alu -6 306 10 2410 57 0 3 chr17 4757274 4757570 -80680910 - AluY SINE Alu -16 295 1 1607 172 31 21 chr17 4757572 4757734 -80680746 - AluJo SINE Alu -9 293 134 1771 130 3 60 chr17 4757734 4757928 -80680552 - AluSx SINE Alu 0 312 108 248 71 48 0 chr17 4757928 4757970 -80680510 + T-rich Low_complexity Low_complexity 2 45 0 1989 92 0 21 chr17 4757970 4758252 -80680228 - AluSq SINE Alu -27 286 11 1771 130 3 60 chr17 4758252 4758397 -80680083 - AluSx SINE Alu -202 110 3 1607 172 31 21 chr17 4758397 4758524 -80679956 - AluJo SINE Alu -168 134 1 1762 95 57 44 chr17 4759032 4759328 -80679152 - AluSp SINE Alu -12 301 2 2263 102 0 3 chr17 4759664 4759968 -80678512 - AluSx SINE Alu -9 303 1 197 330 108 35 chr17 4760096 4760354 -80678126 + L2 LINE L2 2836 3112 -160 2283 93 3 3 chr17 4760361 4760674 -80677806 - AluSp SINE Alu 0 313 1 1628 171 10 33 chr17 4760677 4760976 -80677504 - AluJo SINE Alu -16 296 5 211 243 146 68 chr17 4761227 4761330 -80677150 - MIR SINE MIR -125 137 27 242 314 49 10 chr17 4761449 4761551 -80676929 + MIR3 SINE MIR 3 108 -100 2038 115 3 16 chr17 4761785 4762089 -80676391 + AluSx SINE Alu 5 304 -8 2092 94 3 19 chr17 4762271 4762580 -80675900 - AluSx SINE Alu -8 304 1 518 278 124 0 chr17 4762655 4762824 -80675656 + MIR SINE MIR 71 260 -2 2032 110 0 0 chr17 4762856 4763137 -80675343 + AluSg SINE Alu 11 291 -19 2170 64 0 7 chr17 4763342 4763623 -80674857 + AluY SINE Alu 1 279 -32 219 24 49 24 chr17 4763623 4763664 -80674816 + (TAAAA)n Simple_repeat Simple_repeat 1 42 0 1907 139 10 0 chr17 4763673 4763961 -80674519 - AluJo SINE Alu -21 291 1 288 0 0 0 chr17 4763987 4764019 -80674461 + (TG)n Simple_repeat Simple_repeat 2 33 0 2160 108 0 9 chr17 4764521 4764836 -80673644 - AluSq SINE Alu -1 312 1 2164 77 0 11 chr17 4764884 4765207 -80673273 - AluSq SINE Alu 0 320 1 1340 147 23 27 chr17 4765371 4765500 -80672980 + AluJb SINE Alu 3 131 -181 2162 104 0 3 chr17 4765500 4765799 -80672681 + AluSc SINE Alu 2 299 -10 1340 147 23 27 chr17 4765799 4765927 -80672553 + AluJb SINE Alu 131 259 -53 525 152 101 0 chr17 4765927 4766026 -80672454 + FRAM SINE Alu 67 175 -1 1866 98 47 20 chr17 4766586 4766882 -80671598 + AluSq SINE Alu 9 312 -1 320 260 0 40 chr17 4767145 4767245 -80671235 + L1MB5 LINE L1 5865 5960 -214 2136 120 3 3 chr17 4767325 4767634 -80670846 + AluSp SINE Alu 3 311 -2 354 229 8 29 chr17 4767688 4767832 -80670648 + L1MC/D LINE L1 5314 5455 -701 1761 173 7 0 chr17 4767853 4768148 -80670332 + AluJb SINE Alu 1 297 -15 285 354 18 6 chr17 4768304 4768468 -80670012 - L1ME LINE L1 -439 5682 5517 2301 93 0 0 chr17 4768508 4768819 -80669661 + AluSq SINE Alu 1 311 -2 1927 92 51 3 chr17 4768994 4769287 -80669193 - AluSq SINE Alu -6 307 1 1043 144 5 60 chr17 4769291 4769506 -80668974 - LTR62 LTR ERVK -516 203 1 2324 88 0 3 chr17 4769814 4770121 -80668359 + AluSx SINE Alu 1 306 -6 584 208 219 6 chr17 4770152 4770330 -80668150 - MLT1D LTR MaLR 0 505 290 787 274 89 38 chr17 4770598 4770967 -80667513 - MLT1H1 LTR MaLR 0 555 168 1511 84 5 0 chr17 4770970 4771173 -80667307 - AluSg1 SINE Alu -16 294 91 817 205 37 23 chr17 4771173 4771388 -80667092 - LTR7 LTR ERV1 0 450 233 715 86 0 0 chr17 4772423 4772516 -80665964 - AluSg1 SINE Alu -215 94 2 467 238 61 37 chr17 4772519 4772683 -80665797 - MLT1H1 LTR MaLR -413 177 10 1808 148 7 3 chr17 4772749 4773056 -80665424 + AluJo SINE Alu 1 308 0 1134 221 92 7 chr17 4773231 4773512 -80664968 - MLT1D LTR MaLR -160 345 41 1963 121 3 19 chr17 4773840 4774154 -80664326 + AluSp SINE Alu 2 310 -3 199 281 18 0 chr17 4774888 4774945 -80663535 + L2 LINE L2 2983 3040 -273 303 280 131 0 chr17 4775231 4775338 -80663142 - MIR3 SINE MIR -52 156 36 2142 98 0 10 chr17 4775556 4775861 -80662619 - AluSx SINE Alu -10 302 1 370 236 63 0 chr17 4776966 4777105 -80661375 + MIR SINE MIR 45 191 -70 2266 57 0 3 chr17 4777246 4777529 -80660951 - AluSq SINE Alu -7 306 25 2071 99 0 7 chr17 4777874 4778177 -80660303 + AluSc SINE Alu 1 301 0 1958 126 3 10 chr17 4778545 4778846 -80659634 + AluSx SINE Alu 6 304 -8 303 250 70 0 chr17 4779117 4779217 -80659263 + (CACTG)n Simple_repeat Simple_repeat 4 110 0 1990 212 42 67 chr17 4779453 4779501 -80658979 - LTR31 LTR ERV1 -17 602 554 2156 55 0 35 chr17 4779501 4779812 -80658668 - AluY SINE Alu -11 300 1 1990 212 42 67 chr17 4779812 4780203 -80658277 - LTR31 LTR ERV1 -65 554 155 2194 104 10 10 chr17 4780203 4780512 -80657968 - AluSq SINE Alu -4 309 1 1990 212 42 67 chr17 4780512 4780636 -80657844 - LTR31 LTR ERV1 -464 155 52 1607 164 38 11 chr17 4780636 4780797 -80657683 - AluJo SINE Alu -15 297 123 270 0 0 0 chr17 4780797 4780827 -80657653 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 1607 164 38 11 chr17 4780827 4780952 -80657528 - AluJo SINE Alu -189 123 3 1990 212 42 67 chr17 4780952 4781003 -80657477 - LTR31 LTR ERV1 -567 52 1 627 163 10 0 chr17 4781472 4781570 -80656910 + AluJ/FLAM SINE Alu 2 100 -212 674 173 17 12 chr17 4781609 4781782 -80656698 + GA-rich Low_complexity Low_complexity 5 178 0 2188 113 0 6 chr17 4781904 4782215 -80656265 + AluSx SINE Alu 2 310 -2 396 295 18 9 chr17 4782764 4782876 -80655604 - L2 LINE L2 -42 3271 3159 1719 175 0 7 chr17 4782945 4783242 -80655238 - AluJo SINE Alu -13 299 5 1023 177 0 0 chr17 4783248 4783406 -80655074 - AluJb SINE Alu -15 297 140 2312 86 3 16 chr17 4783409 4783713 -80654767 - AluSg SINE Alu -6 304 5 736 123 9 0 chr17 4784098 4784204 -80654276 + AluSq/x SINE Alu 5 111 -201 885 176 66 44 chr17 4784223 4784285 -80654195 - AluJo SINE Alu -126 186 127 509 0 16 0 chr17 4784285 4784346 -80654134 + (TG)n Simple_repeat Simple_repeat 2 63 0 885 176 66 44 chr17 4784346 4784465 -80654015 - AluJo SINE Alu -185 127 1 756 161 0 0 chr17 4784465 4784583 -80653897 - AluSg/x SINE Alu -16 296 179 248 143 0 0 chr17 4784683 4784725 -80653755 + Alu SINE Alu 254 295 -4 1324 80 0 6 chr17 4784864 4785027 -80653453 - AluSp SINE Alu -151 162 1 264 30 0 0 chr17 4785095 4785128 -80653352 + (T)n Simple_repeat Simple_repeat 1 33 0 617 266 78 56 chr17 4785188 4785400 -80653080 + L2 LINE L2 2913 3138 -175 1942 138 51 0 chr17 4785400 4785696 -80652784 - AluSx SINE Alu -1 311 1 617 266 78 56 chr17 4785696 4785840 -80652640 + L2 LINE L2 3138 3277 -36 2130 113 19 13 chr17 4786002 4786311 -80652169 + AluSx SINE Alu 1 311 -1 2360 70 3 3 chr17 4786584 4786892 -80651588 + AluSp SINE Alu 2 309 0 324 295 11 0 chr17 4787175 4787270 -80651210 - MIR3 SINE MIR -2 206 111 1674 167 7 7 chr17 4787318 4787421 -80651059 + AluJb SINE Alu 31 133 -179 2351 105 0 0 chr17 4787421 4787715 -80650765 + AluSq SINE Alu 1 294 -19 1674 167 7 7 chr17 4787715 4787893 -80650587 + AluJb SINE Alu 132 312 0 2256 96 7 0 chr17 4788438 4788729 -80649751 + AluSc SINE Alu 5 297 -12 591 98 0 12 chr17 4788866 4788948 -80649532 - AluJb SINE Alu -148 164 84 1769 132 38 0 chr17 4788995 4789260 -80649220 + AluSx SINE Alu 18 292 -20 26 50 0 0 chr17 4789261 4789301 -80649179 + AT_rich Low_complexity Low_complexity 1 40 0 2253 96 20 0 chr17 4789354 4789646 -80648834 + AluSp SINE Alu 1 298 -15 2279 96 3 7 chr17 4789648 4789950 -80648530 + AluY SINE Alu 1 301 -10 303 275 101 36 chr17 4790055 4790193 -80648287 - L1MC/D LINE L1 -2183 5625 5479 2221 75 6 53 chr17 4790202 4790521 -80647959 + AluSg SINE Alu 2 305 -5 714 189 13 19 chr17 4790660 4790819 -80647661 - MLT1B LTR MaLR -41 349 192 218 171 0 0 chr17 4790870 4790905 -80647575 + GA-rich Low_complexity Low_complexity 1 35 0 427 215 16 0 chr17 4790920 4791041 -80647439 + CT-rich Low_complexity Low_complexity 1 123 0 582 180 0 27 chr17 4791041 4791152 -80647328 - AluJb SINE Alu -3 309 202 1447 177 0 4 chr17 4791154 4791386 -80647094 - AluJo SINE Alu -73 239 9 327 207 129 43 chr17 4791409 4791525 -80646955 - MLT1B LTR MaLR -263 127 2 1976 117 3 23 chr17 4791592 4791892 -80646588 - AluSg SINE Alu -15 295 2 991 117 0 0 chr17 4791983 4792111 -80646369 - AluJb SINE Alu -23 289 162 711 261 92 38 chr17 4792482 4792850 -80645630 - MLT1H1 LTR MaLR 0 555 168 1541 88 5 5 chr17 4792853 4793057 -80645423 - AluSg/x SINE Alu -16 296 93 698 209 32 41 chr17 4793057 4793277 -80645203 - LTR7 LTR ERV1 0 450 233 2302 109 3 0 chr17 4795466 4795777 -80642703 + AluSq SINE Alu 1 312 -1 378 0 0 0 chr17 4796277 4796319 -80642161 + (CA)n Simple_repeat Simple_repeat 2 43 0 1805 129 29 0 chr17 4796345 4796623 -80641857 + AluJo SINE Alu 1 286 -26 246 192 27 41 chr17 4796801 4796874 -80641606 + C-rich Low_complexity Low_complexity 1 72 0 28 0 0 0 chr17 4796968 4796996 -80641484 + GC_rich Low_complexity Low_complexity 1 28 0 5684 52 8 0 chr17 4797568 4798226 -80640254 + LTR5 LTR ERVK 1 663 -306 207 303 37 46 chr17 4798572 4798681 -80639799 - L2 LINE L2 -223 3049 2942 201 343 27 0 chr17 4798688 4798761 -80639719 + L2 LINE L2 2884 2958 -356 2390 81 3 3 chr17 4798779 4799087 -80639393 - AluSp SINE Alu -5 308 1 2210 82 13 16 chr17 4799093 4799396 -80639084 - AluSq SINE Alu -11 302 1 996 181 12 0 chr17 4800010 4800176 -80638304 + AluSg/x SINE Alu 138 305 -7 2029 121 3 36 chr17 4800329 4800662 -80637818 - AluSq SINE Alu 0 313 1 23 0 0 0 chr17 4800708 4800731 -80637749 + AT_rich Low_complexity Low_complexity 1 23 0 624 196 38 23 chr17 4800731 4800864 -80637616 - AluJb SINE Alu -176 136 2 907 126 0 0 chr17 4801335 4801454 -80637026 + AluSg/x SINE Alu 169 287 -23 2444 101 0 0 chr17 4801454 4801762 -80636718 + AluSx SINE Alu 1 308 -4 1901 116 0 56 chr17 4801951 4802235 -80636245 - AluSq SINE Alu -16 297 30 2087 127 20 0 chr17 4802371 4802663 -80635817 + AluSx SINE Alu 1 298 -14 2268 62 4 7 chr17 4802963 4803237 -80635243 + AluSp SINE Alu 32 304 -9 207 204 0 0 chr17 4803576 4803625 -80634855 + T-rich Low_complexity Low_complexity 3 51 0 4500 36 0 12 chr17 4803625 4804127 -80634353 - SVA Other Other 0 1386 891 2140 107 24 0 chr17 4804427 4804717 -80633763 - AluSx SINE Alu -15 297 1 303 252 47 65 chr17 4804843 4804950 -80633530 + L1MDa LINE L1 1984 2088 -4452 265 208 56 14 chr17 4805591 4805663 -80632817 - MIR SINE MIR -75 187 113 2334 79 0 0 chr17 4807257 4807537 -80630943 - AluSq SINE Alu -16 297 18 2396 83 0 13 chr17 4807708 4808022 -80630458 - AluSg SINE Alu 0 310 1 2640 67 0 0 chr17 4808027 4808339 -80630141 - AluSx SINE Alu 0 312 1 213 204 23 11 chr17 4808889 4808977 -80629503 + CT-rich Low_complexity Low_complexity 1 89 0 2308 107 3 3 chr17 4809296 4809605 -80628875 + AluSx SINE Alu 1 309 -3 426 282 141 33 chr17 4809634 4809847 -80628633 + MIR SINE MIR 21 256 -6 2139 105 3 3 chr17 4810013 4810308 -80628172 + AluSx SINE Alu 1 295 -17 2204 117 0 7 chr17 4810308 4810608 -80627872 + AluSg SINE Alu 1 298 -12 1406 150 0 0 chr17 4811381 4811588 -80626892 - AluSq SINE Alu -7 306 100 2247 81 0 7 chr17 4811590 4811875 -80626605 - AluY SINE Alu -28 283 1 2070 111 3 20 chr17 4812081 4812379 -80626101 - AluSx SINE Alu -19 293 1 253 314 49 10 chr17 4812610 4812712 -80625768 - MIR3 SINE MIR -100 108 3 231 182 158 87 chr17 4812831 4812934 -80625546 + MIR SINE MIR 27 138 -70 1747 166 10 30 chr17 4813181 4813483 -80624997 + AluJo SINE Alu 1 296 -16 2400 96 3 3 chr17 4813486 4813799 -80624681 + AluSp SINE Alu 1 313 0 202 313 113 45 chr17 4813806 4814071 -80624409 - L2 LINE L2 -160 3112 2830 2427 100 0 0 chr17 4814192 4814493 -80623987 + AluSx SINE Alu 1 301 -11 229 245 20 0 chr17 4814495 4814544 -80623936 + MIR3 SINE MIR 136 185 -23 1963 92 58 48 chr17 4814824 4815119 -80623361 + AluSp SINE Alu 2 299 -14 1337 114 11 0 chr17 4815221 4815396 -80623084 - AluSg SINE Alu -133 177 1 2084 122 30 7 chr17 4815459 4815754 -80622726 + AluSx SINE Alu 11 312 0 2183 105 7 13 chr17 4815756 4816061 -80622419 + AluSg SINE Alu 1 303 -7 277 330 0 0 chr17 4816068 4816159 -80622321 + L1ME LINE L1 5560 5650 -520 1849 173 77 0 chr17 4816165 4816478 -80622002 - MER1B DNA MER1_type 0 337 1 1703 168 10 20 chr17 4816544 4816847 -80621633 + AluJo SINE Alu 1 300 -12 1248 141 20 43 chr17 4816847 4817102 -80621378 - Charlie1b DNA MER1_type -216 307 59 321 300 36 18 chr17 4817219 4817329 -80621151 + L2 LINE L2 3152 3263 -9 2370 99 0 13 chr17 4817553 4817866 -80620614 + AluSp SINE Alu 1 309 -4 2175 124 0 0 chr17 4817938 4818236 -80620244 + AluSx SINE Alu 3 300 -12 2244 116 3 3 chr17 4818237 4818547 -80619933 + AluSp SINE Alu 1 310 -3 3140 179 92 28 chr17 4818553 4819234 -80619246 + MER21B LTR ERV1 94 818 -45 2321 86 0 0 chr17 4819255 4819565 -80618915 + AluSc SINE Alu 1 310 0 1492 193 4 22 chr17 4819572 4819847 -80618633 + AluJo SINE Alu 1 270 -42 252 0 0 0 chr17 4819866 4819894 -80618586 + (GAAAA)n Simple_repeat Simple_repeat 2 29 0 1304 161 81 22 chr17 4819923 4820196 -80618284 + AluJo SINE Alu 13 301 -11 27 49 0 0 chr17 4820267 4820308 -80618172 + AT_rich Low_complexity Low_complexity 1 41 0 300 246 158 35 chr17 4820516 4820630 -80617850 - L2 LINE L2 0 3313 3186 1193 148 6 0 chr17 4820719 4820895 -80617585 - AluSg/x SINE Alu -2 310 134 1932 129 3 45 chr17 4820895 4821205 -80617275 - AluSx SINE Alu -15 297 1 1825 73 0 0 chr17 4821241 4821475 -80617005 - L1PA6 LINE L1 -2 6152 5919 2131 109 3 10 chr17 4821594 4821897 -80616583 - AluSx SINE Alu -11 301 1 572 291 0 55 chr17 4822330 4822529 -80615951 - MIR SINE MIR -72 190 3 1790 88 0 0 chr17 4822647 4822874 -80615606 + AluSg/x SINE Alu 70 296 -14 2030 195 101 43 chr17 4823867 4824400 -80614080 - LTR6A LTR ERV1 0 564 1 2186 112 3 7 chr17 4824719 4825013 -80613467 - AluSx SINE Alu -19 293 1 1554 163 67 14 chr17 4825282 4825564 -80612916 + AluJo SINE Alu 1 297 -15 1759 164 44 0 chr17 4825564 4825856 -80612624 + AluJb SINE Alu 1 306 -6 757 161 0 0 chr17 4825858 4825970 -80612510 + FLAM_C SINE Alu 2 113 -30 24 0 0 0 chr17 4826021 4826045 -80612435 + AT_rich Low_complexity Low_complexity 1 24 0 2426 78 0 0 chr17 4826056 4826352 -80612128 + AluY SINE Alu 1 296 -15 845 138 23 0 chr17 4827088 4827218 -80611262 + FLAM_C SINE Alu 1 133 0 1157 242 11 23 chr17 4827294 4827558 -80610922 - MIR SINE MIR 0 262 2 2485 112 6 8 chr17 4827661 4828017 -80610463 + THE1A LTR MaLR 1 355 0 11729 91 10 8 chr17 4828017 4829594 -80608886 + THE1A-int LTR MaLR 1 1580 0 2272 127 17 17 chr17 4829594 4829949 -80608531 + THE1A LTR MaLR 1 355 0 1376 105 0 0 chr17 4830716 4830888 -80607592 + AluSq SINE Alu 1 172 -141 2159 105 18 0 chr17 4831258 4831544 -80606936 - AluSc SINE Alu -17 292 2 2070 126 7 3 chr17 4831834 4832128 -80606352 + AluSx SINE Alu 1 295 -17 7014 197 63 40 chr17 4832128 4832552 -80605928 + MLT1A1-int LTR MaLR 118 531 -1204 2207 126 3 0 chr17 4832552 4832861 -80605619 - AluSq SINE Alu -3 310 1 7014 197 63 40 chr17 4832861 4834018 -80604462 + MLT1A1-int LTR MaLR 531 1735 0 1825 167 39 28 chr17 4834018 4834170 -80604310 + MLT1A1 LTR MaLR 1 150 -215 1914 156 0 56 chr17 4834170 4834321 -80604159 + AluJo SINE Alu 1 126 -186 2382 96 0 10 chr17 4834321 4834624 -80603856 + AluY SINE Alu 1 300 -11 1914 156 0 56 chr17 4834624 4834793 -80603687 + AluJo SINE Alu 126 303 -9 1825 167 39 28 chr17 4834793 4835000 -80603480 + MLT1A1 LTR MaLR 150 364 -1 498 250 152 32 chr17 4835002 4835079 -80603401 + MLT1L LTR MaLR 201 267 -348 2242 92 46 0 chr17 4835079 4835363 -80603117 + AluSc SINE Alu 1 297 -12 498 250 152 32 chr17 4835363 4835628 -80602852 + MLT1L LTR MaLR 267 615 0 2186 119 14 0 chr17 4835767 4836061 -80602419 - AluSx SINE Alu -14 298 1 2263 102 13 3 chr17 4836197 4836500 -80601980 - AluSq SINE Alu -7 306 1 308 359 145 0 chr17 4836756 4836887 -80601593 - L2 LINE L2 -7 3265 3116 24 0 0 0 chr17 4836887 4836911 -80601569 + AT_rich Low_complexity Low_complexity 1 24 0 527 222 123 6 chr17 4836995 4837166 -80601314 - L2 LINE L2 -6 3307 3117 367 327 157 44 chr17 4837241 4837308 -80601172 - L2 LINE L2 -338 2976 2918 2316 107 3 3 chr17 4837308 4837617 -80600863 - AluSg SINE Alu -1 309 1 367 327 157 44 chr17 4837617 4838225 -80600255 - L2 LINE L2 -396 2918 2177 2252 98 0 30 chr17 4838225 4838530 -80599950 + AluSx SINE Alu 1 296 -16 367 327 157 44 chr17 4838530 4838725 -80599755 - L2 LINE L2 -1137 2177 2006 243 0 0 0 chr17 4838935 4838962 -80599518 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2046 74 4 0 chr17 4838964 4839207 -80599273 - AluSp SINE Alu -31 282 39 191 91 91 0 chr17 4840884 4840917 -80597563 - MIR SINE MIR -115 147 112 1941 163 0 7 chr17 4841051 4841352 -80597128 + AluJo SINE Alu 1 299 -13 2223 111 34 0 chr17 4841591 4841889 -80596591 + AluSx SINE Alu 5 312 0 750 261 33 58 chr17 4842030 4842164 -80596316 + MIR SINE MIR 28 155 -107 2548 73 0 0 chr17 4842164 4842467 -80596013 + AluY SINE Alu 1 303 -8 750 261 33 58 chr17 4842467 4842573 -80595907 + MIR SINE MIR 155 262 0 536 306 70 73 chr17 4842577 4842946 -80595534 - L2 LINE L2 0 3313 2946 1693 162 75 0 chr17 4843102 4843380 -80595100 - AluJb SINE Alu -13 299 1 2098 145 0 3 chr17 4843408 4843704 -80594776 + AluSx SINE Alu 1 295 -17 838 251 95 63 chr17 4843731 4844109 -80594371 + MLT1B LTR MaLR 1 390 0 2405 88 0 0 chr17 4844119 4844414 -80594066 + AluY SINE Alu 1 295 -16 2546 58 0 0 chr17 4844414 4844706 -80593774 + AluY SINE Alu 12 303 -8 1583 219 43 129 chr17 4845159 4845174 -80593306 + L1ME3A LINE L1 5564 5579 -591 2367 112 0 3 chr17 4845174 4845487 -80592993 + AluSx SINE Alu 1 312 0 1583 219 43 129 chr17 4845487 4845751 -80592729 + L1ME3A LINE L1 5579 5864 -306 1518 164 20 55 chr17 4845751 4846069 -80592411 + AluJo SINE Alu 1 308 0 1583 219 43 129 chr17 4846069 4846230 -80592250 + L1ME3A LINE L1 5864 5933 -237 2426 104 0 0 chr17 4846230 4846538 -80591942 + AluSg SINE Alu 2 309 -1 1583 219 43 129 chr17 4846538 4846753 -80591727 + L1ME3A LINE L1 5933 6165 -5 264 30 0 0 chr17 4847224 4847257 -80591223 + (TG)n Simple_repeat Simple_repeat 2 34 0 5067 31 0 0 chr17 4847257 4847873 -80590607 - L1PA4 LINE L1 -4 6151 5536 1942 160 0 0 chr17 4847873 4848167 -80590313 - AluJo SINE Alu -18 294 1 2361 105 7 0 chr17 4848175 4848481 -80589999 - AluSx SINE Alu -4 308 1 685 140 61 0 chr17 4848642 4848756 -80589724 - FLAM_C SINE Alu -17 126 6 2181 190 74 88 chr17 4848789 4848879 -80589601 + MER77 LTR ERV1 46 136 -469 2431 84 0 3 chr17 4848879 4849176 -80589304 + AluSg SINE Alu 1 296 -14 2110 137 0 3 chr17 4849186 4849486 -80588994 + AluSx SINE Alu 1 299 -13 2181 190 74 88 chr17 4849486 4849952 -80588528 + MER77 LTR ERV1 145 605 0 757 140 0 113 chr17 4850141 4850291 -80588189 + FLAM_A SINE Alu 1 133 0 2384 102 0 22 chr17 4850298 4850612 -80587868 + AluSg SINE Alu 1 307 -3 2391 92 0 0 chr17 4850620 4850913 -80587567 + AluSx SINE Alu 4 296 -16 298 264 0 0 chr17 4851277 4851349 -80587131 - MIR SINE MIR -176 86 15 236 152 22 0 chr17 4851389 4851435 -80587045 + L2 LINE L2 3224 3270 -2 2164 101 0 21 chr17 4851632 4851919 -80586561 - AluSq SINE Alu -31 282 2 2463 76 0 7 chr17 4851931 4852233 -80586247 - AluY SINE Alu -11 300 1 2404 99 0 0 chr17 4852505 4852807 -80585673 - AluSq SINE Alu -11 302 1 324 274 239 9 chr17 4852932 4853045 -80585435 - MIR3 SINE MIR -21 187 49 2267 110 0 23 chr17 4853383 4853692 -80584788 - AluSx SINE Alu -10 302 1 333 234 115 40 chr17 4853728 4853882 -80584598 + MIR SINE MIR 34 204 -58 2381 74 0 10 chr17 4853981 4854279 -80584201 - AluY SINE Alu -16 295 1 291 28 0 0 chr17 4854280 4854316 -80584164 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 2169 105 22 0 chr17 4854316 4854593 -80583887 - AluSg SINE Alu -27 283 1 2268 118 0 0 chr17 4855021 4855317 -80583163 + AluSx SINE Alu 1 296 -16 2222 120 0 3 chr17 4855317 4855616 -80582864 + AluSq SINE Alu 1 298 -15 1811 133 29 32 chr17 4855617 4855933 -80582547 + MER21A LTR ERV1 617 931 0 311 265 102 48 chr17 4855933 4856099 -80582381 + HAL1 LINE L1 2325 2499 -8 2263 113 3 3 chr17 4856820 4857121 -80581359 - AluSx SINE Alu -2 310 10 1019 144 4 105 chr17 4857191 4857420 -80581060 + L1 LINE L1 4827 5032 -1114 1028 113 0 0 chr17 4857420 4857562 -80580918 + AluSp/q SINE Alu 168 309 -4 363 236 28 69 chr17 4857724 4857868 -80580612 + MER117 DNA MER1_type 3 140 -57 484 181 0 0 chr17 4858338 4858421 -80580059 - Tigger5 DNA MER2_type 0 2323 2241 2173 115 26 0 chr17 4858421 4858725 -80579755 + AluSx SINE Alu 1 312 0 901 87 17 0 chr17 4858725 4858840 -80579640 - AluSq/x SINE Alu -195 117 1 1299 111 12 0 chr17 4858871 4859042 -80579438 + AluSg/x SINE Alu 138 310 -2 419 226 0 12 chr17 4859048 4859132 -80579348 - Tigger5 DNA MER2_type -2240 83 1 2131 123 0 3 chr17 4859542 4859864 -80578616 + AluSx SINE Alu 1 321 0 2395 99 0 3 chr17 4860267 4860581 -80577899 + AluSp SINE Alu 1 313 0 894 132 14 127 chr17 4860684 4860747 -80577733 - MER5A DNA MER1_type 0 189 121 2183 120 3 19 chr17 4860747 4861064 -80577416 + AluSx SINE Alu 1 312 0 894 132 14 127 chr17 4861064 4861213 -80577267 - MER5A DNA MER1_type -68 121 1 516 180 73 101 chr17 4861224 4861383 -80577097 + MER5B DNA MER1_type 4 159 -19 8201 64 2 3 chr17 4861383 4862353 -80576127 - LTR5 LTR ERVK 0 969 1 516 180 73 101 chr17 4862353 4862371 -80576109 + MER5B DNA MER1_type 159 176 -2 283 353 101 29 chr17 4862559 4862741 -80575739 - L2 LINE L2 -1968 1346 1132 2199 107 3 17 chr17 4862741 4862904 -80575576 - AluSg SINE Alu -16 294 135 2418 98 3 0 chr17 4862904 4863211 -80575269 - AluSg SINE Alu -2 308 1 2199 107 3 17 chr17 4863211 4863345 -80575135 - AluSg SINE Alu -175 135 1 283 353 101 29 chr17 4863345 4863468 -80575012 - L2 LINE L2 -2182 1132 1019 2325 78 3 19 chr17 4863827 4864134 -80574346 + AluSq SINE Alu 1 302 -11 2198 103 3 10 chr17 4864140 4864450 -80574030 + AluSp SINE Alu 1 308 -5 194 319 42 0 chr17 4864468 4864540 -80573940 - L2 LINE L2 -356 2958 2884 293 286 13 0 chr17 4865857 4865934 -80572546 - L2 LINE L2 -9 3263 3186 1652 127 91 36 chr17 4865962 4866237 -80572243 + AluJb SINE Alu 1 290 -22 2237 114 3 0 chr17 4866480 4866779 -80571701 + AluSx SINE Alu 1 300 -12 608 199 12 53 chr17 4867164 4867335 -80571145 - Charlie2 DNA MER1_type -7 2855 2692 1527 87 36 14 chr17 4867816 4868035 -80570445 - AluY SINE Alu -4 307 84 386 320 28 39 chr17 4868109 4868290 -80570190 + Charlie2 DNA MER1_type 1 179 -2603 1575 190 3 27 chr17 4868291 4868319 -80570161 - AluJb SINE Alu -2 310 283 264 30 0 0 chr17 4868319 4868352 -80570128 + (TTATA)n Simple_repeat Simple_repeat 4 36 0 1575 190 3 27 chr17 4868352 4868623 -80569857 - AluJb SINE Alu -29 283 18 260 252 110 47 chr17 4868631 4868758 -80569722 + Charlie2 DNA MER1_type 1931 2065 -797 2066 112 46 0 chr17 4869088 4869373 -80569107 + AluSp SINE Alu 1 298 -15 600 259 24 24 chr17 4869383 4869549 -80568931 - MER5A DNA MER1_type 0 189 24 2247 100 4 0 chr17 4869660 4869979 -80568501 - AluSx SINE Alu 0 320 1 2636 0 0 17 chr17 4870081 4870374 -80568106 - AluYa5 SINE Alu -6 305 18 1500 108 28 9 chr17 4870409 4870621 -80567859 + AluSg/x SINE Alu 92 307 -5 419 310 71 25 chr17 4870890 4871087 -80567393 - MIR SINE MIR 0 262 57 2193 108 3 7 chr17 4872191 4872498 -80565982 + AluSx SINE Alu 1 306 -6 751 174 122 31 chr17 4872498 4872694 -80565786 + MLT1A2 LTR MaLR 161 374 0 2149 101 3 0 chr17 4872916 4873202 -80565278 + AluSx SINE Alu 1 287 -25 189 0 0 0 chr17 4873202 4873223 -80565257 + (CA)n Simple_repeat Simple_repeat 2 22 0 200 259 25 0 chr17 4873908 4873989 -80564491 + (CCCCG)n Simple_repeat Simple_repeat 4 86 0 421 319 103 5 chr17 4874340 4874544 -80563936 + MIR SINE MIR 31 254 -8 233 265 128 26 chr17 4874530 4874647 -80563833 - L2 LINE L2 -301 3012 2884 * 293 304 25 44 chr17 4874762 4874889 -80563591 + L2 LINE L2 3159 3284 -29 2394 78 0 3 chr17 4874889 4875185 -80563295 + AluSg SINE Alu 3 297 -13 293 304 25 44 chr17 4875185 4875215 -80563265 + L2 LINE L2 3284 3313 0 456 273 106 30 chr17 4875237 4875435 -80563045 - L2 LINE L2 -515 2799 2587 1662 114 124 40 chr17 4875468 4875741 -80562739 + AluSg SINE Alu 1 296 -14 2187 222 61 48 chr17 4875853 4876555 -80561925 - LTR28 LTR ERV1 -2 1018 308 317 174 23 47 chr17 4876524 4876610 -80561870 - LTR1 LTR ERV1 -595 190 107 * 388 244 267 0 chr17 4876622 4876757 -80561723 - LTR28 LTR ERV1 -842 178 8 24 0 0 0 chr17 4877390 4877414 -80561066 + AT_rich Low_complexity Low_complexity 1 24 0 300 319 104 7 chr17 4877441 4877576 -80560904 - MIR SINE MIR -34 228 81 216 0 0 0 chr17 4878205 4878229 -80560251 + (TCTG)n Simple_repeat Simple_repeat 3 26 0 287 257 129 36 chr17 4878567 4878707 -80559773 - MIR3 SINE MIR -12 196 44 212 184 20 20 chr17 4880267 4880316 -80558164 + (CCCCAG)n Simple_repeat Simple_repeat 3 51 0 198 71 0 0 chr17 4881103 4881131 -80557349 + (GCGTG)n Simple_repeat Simple_repeat 4 31 0 279 133 0 0 chr17 4881615 4881660 -80556820 + (CA)n Simple_repeat Simple_repeat 1 45 0 249 117 30 0 chr17 4882244 4882293 -80556187 - MLT-int LTR MaLR -1159 212 140 729 183 17 46 chr17 4882330 4882505 -80555975 + MLT1C LTR MaLR 298 467 0 3082 133 4 12 chr17 4882703 4883190 -80555290 + MER1A DNA MER1_type 47 529 0 549 68 0 0 chr17 4883394 4883468 -80555012 + (CA)n Simple_repeat Simple_repeat 2 75 0 2390 94 3 7 chr17 4883514 4883821 -80554659 - AluSp SINE Alu -7 306 1 196 202 22 22 chr17 4884372 4884461 -80554019 + CT-rich Low_complexity Low_complexity 1 89 0 210 222 0 0 chr17 4884775 4884820 -80553660 + G-rich Low_complexity Low_complexity 4 48 0 183 80 0 0 chr17 4885304 4885329 -80553151 + (TGGA)n Simple_repeat Simple_repeat 4 28 0 1902 163 21 6 chr17 4885409 4885747 -80552733 + MER2 DNA MER2_type 2 344 0 233 175 18 53 chr17 4886764 4886821 -80551659 - SN5 Other centromeric -77 378 324 1069 295 42 31 chr17 4892159 4892831 -80545649 + L1MC3 LINE L1 5486 6164 -1621 502 248 39 107 chr17 4898007 4898147 -80540333 - L1MD3 LINE L1 0 7995 7886 1604 163 0 27 chr17 4898147 4898447 -80540033 + AluJo SINE Alu 1 292 -20 502 248 39 107 chr17 4898447 4898616 -80539864 - L1MD3 LINE L1 -109 7886 7707 372 173 0 40 chr17 4898820 4898895 -80539585 - AluJ/FRAM SINE Alu -11 291 220 * 1703 130 83 7 chr17 4898887 4899163 -80539317 + MER7A DNA MER2_type 48 342 -4 1692 137 16 46 chr17 4900784 4900918 -80537562 + AluSx SINE Alu 1 137 -175 6200 34 0 8 chr17 4900918 4901648 -80536832 + SVA Other Other 661 1384 -2 1692 137 16 46 chr17 4901648 4901819 -80536661 + AluSx SINE Alu 137 297 -15 239 222 30 30 chr17 4902093 4902235 -80536245 + (TTATA)n Simple_repeat Simple_repeat 1 142 0 229 365 117 7 chr17 4905198 4905335 -80533145 - MIR3 SINE MIR -15 193 42 678 200 113 16 chr17 4905640 4905771 -80532709 + MER3 DNA MER1_type 4 160 -49 1535 202 10 0 chr17 4905771 4906078 -80532402 - AluJb SINE Alu -2 310 1 678 200 113 16 chr17 4906078 4906131 -80532349 + MER3 DNA MER1_type 160 206 -3 31 44 0 0 chr17 4906775 4906820 -80531660 + AT_rich Low_complexity Low_complexity 1 45 0 2173 121 0 3 chr17 4907021 4907334 -80531146 + AluSx SINE Alu 1 312 0 577 197 8 38 chr17 4907360 4907492 -80530988 + FAM SINE Alu 1 45 -4 358 302 147 16 chr17 4907784 4907913 -80530567 + MIR3 SINE MIR 2 147 -61 1967 118 7 0 chr17 4907916 4908195 -80530285 + AluSq SINE Alu 1 281 -32 399 21 0 0 chr17 4908195 4908243 -80530237 + (TAAA)n Simple_repeat Simple_repeat 1 48 0 1268 204 92 79 chr17 4908332 4908405 -80530075 - MLT1C LTR MaLR 0 467 396 2111 91 7 10 chr17 4908405 4908701 -80529779 - AluSc SINE Alu -14 295 1 1268 204 92 79 chr17 4908701 4909083 -80529397 - MLT1C LTR MaLR -71 396 6 1564 217 141 40 chr17 4909130 4909344 -80529136 + L1ME3A LINE L1 4399 4590 -1556 347 0 23 0 chr17 4909344 4909387 -80529093 + (TG)n Simple_repeat Simple_repeat 1 44 0 1564 217 141 40 chr17 4909387 4909869 -80528611 + L1ME3A LINE L1 4590 5165 -981 2013 111 0 33 chr17 4909869 4910175 -80528305 + AluSg SINE Alu 1 296 -14 880 260 83 42 chr17 4910176 4910638 -80527842 + L1ME3A LINE L1 5392 5899 -271 1692 168 3 10 chr17 4910638 4910936 -80527544 + AluJb SINE Alu 6 301 -11 880 260 83 42 chr17 4910936 4910996 -80527484 + L1ME3A LINE L1 5899 5955 -215 317 297 34 47 chr17 4911063 4911211 -80527269 + L1ME3A LINE L1 5968 6113 -57 2158 94 3 7 chr17 4911211 4911509 -80526971 - AluSp SINE Alu -16 297 1 2111 119 0 3 chr17 4911576 4911878 -80526602 - AluSg SINE Alu -9 301 1 1531 181 13 10 chr17 4912663 4912961 -80525519 - AluJo SINE Alu -13 299 1 37 52 0 0 chr17 4913651 4913709 -80524771 + AT_rich Low_complexity Low_complexity 1 58 0 2173 106 6 3 chr17 4914230 4914542 -80523938 - AluSp SINE Alu 0 313 1 1849 153 7 3 chr17 4914673 4914968 -80523512 - AluSx SINE Alu -16 296 1 35 74 0 11 chr17 4914970 4915014 -80523466 + AT_rich Low_complexity Low_complexity 1 44 -50 2079 105 0 13 chr17 4915014 4915328 -80523152 - AluSx SINE Alu -2 310 1 35 74 0 11 chr17 4915328 4915378 -80523102 + AT_rich Low_complexity Low_complexity 44 94 0 799 236 112 117 chr17 4915512 4915597 -80522883 - L2 LINE L2 -799 2515 2431 2024 95 15 0 chr17 4915597 4915870 -80522610 - AluSc SINE Alu -32 277 1 799 236 112 117 chr17 4915870 4916229 -80522251 - L2 LINE L2 -883 2431 2073 1780 133 7 13 chr17 4916229 4916529 -80521951 + AluSx SINE Alu 1 298 -14 2579 13 10 7 chr17 4916996 4917300 -80521180 + AluYa5 SINE Alu 1 305 -6 2083 103 4 0 chr17 4917402 4917726 -80520754 + AluSx SINE Alu 1 325 0 646 259 24 24 chr17 4917836 4918002 -80520478 + MER5A DNA MER1_type 24 189 0 1920 112 46 0 chr17 4918012 4918297 -80520183 - AluSp SINE Alu -15 298 1 278 254 111 40 chr17 4918626 4918752 -80519728 - Charlie2 DNA MER1_type -797 2065 1931 1269 191 8 12 chr17 4918760 4919017 -80519463 + AluJb SINE Alu 18 273 -39 31 44 0 0 chr17 4919643 4919688 -80518792 + AT_rich Low_complexity Low_complexity 1 45 0 2179 125 0 0 chr17 4919889 4920201 -80518279 + AluSx SINE Alu 1 312 0 556 199 8 38 chr17 4920227 4920358 -80518122 + FAM SINE Alu 1 44 -5 358 302 147 16 chr17 4920647 4920776 -80517704 + MIR3 SINE MIR 2 147 -61 1899 120 18 0 chr17 4920779 4921063 -80517417 + AluSq SINE Alu 1 289 -24 288 0 0 0 chr17 4921071 4921103 -80517377 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 378 171 0 14 chr17 4921192 4921262 -80517218 - MLT1C LTR MaLR 0 467 399 2227 72 10 3 chr17 4921263 4921556 -80516924 - AluSc SINE Alu -14 295 1 1860 133 0 17 chr17 4921556 4921849 -80516631 - AluJb SINE Alu -14 298 11 643 280 63 19 chr17 4921849 4922161 -80516319 - L1ME LINE L1 -360 5806 5479 1955 93 6 42 chr17 4922170 4922481 -80515999 + AluSg SINE Alu 2 301 -9 247 162 0 0 chr17 4922540 4922577 -80515903 - MLT1B LTR MaLR 0 390 354 817 192 13 0 chr17 4922620 4922776 -80515704 - MLT1B LTR MaLR -41 349 192 218 171 0 0 chr17 4922827 4922862 -80515618 + GA-rich Low_complexity Low_complexity 1 35 0 427 215 16 0 chr17 4922877 4922998 -80515482 + CT-rich Low_complexity Low_complexity 1 123 0 556 189 0 27 chr17 4922998 4923109 -80515371 - AluJb SINE Alu -3 309 202 1356 181 4 0 chr17 4923111 4923349 -80515131 - AluJo SINE Alu -73 239 1 328 203 125 55 chr17 4923349 4923477 -80515003 - MLT1B LTR MaLR -252 138 2 2077 116 3 0 chr17 4923543 4923835 -80514645 - AluSg SINE Alu -16 294 2 1875 145 0 0 chr17 4923929 4924218 -80514262 - AluJb SINE Alu -23 289 1 1970 83 3 95 chr17 4924387 4924524 -80513956 + AluSq SINE Alu 1 149 -164 2033 78 50 0 chr17 4924524 4924807 -80513673 + AluY SINE Alu 1 297 -14 1970 83 3 95 chr17 4924807 4925006 -80513474 + AluSq SINE Alu 149 306 -7 2101 117 0 3 chr17 4925786 4926085 -80512395 - AluSg SINE Alu -12 298 1 1960 107 0 13 chr17 4926085 4926384 -80512096 - AluSx SINE Alu -17 295 1 413 271 145 42 chr17 4926551 4926765 -80511715 - MIR SINE MIR -6 256 21 1067 153 22 9 chr17 4926794 4927016 -80511464 - AluSq SINE Alu -4 309 85 262 239 31 25 chr17 4927150 4927309 -80511171 + (CGCGG)n Simple_repeat Simple_repeat 1 160 0 26 50 0 0 chr17 4927448 4927488 -80510992 + GC_rich Low_complexity Low_complexity 1 40 0 405 0 0 0 chr17 4927500 4927545 -80510935 + (GA)n Simple_repeat Simple_repeat 2 46 0 599 228 233 5 chr17 4927546 4927752 -80510728 - L2 LINE L2 -1239 2075 1823 1368 270 156 38 chr17 4927965 4928557 -80509923 - L2 LINE L2 -2241 1073 390 1876 157 0 7 chr17 4928557 4928863 -80509617 + AluJb SINE Alu 5 308 -4 1368 270 156 38 chr17 4928863 4928948 -80509532 - L2 LINE L2 -2924 390 316 366 171 11 34 chr17 4929269 4929357 -80509123 - L1MA9 LINE L1 -5 6307 6222 3074 31 3 0 chr17 4929455 4929811 -80508669 - L1P2 LINE L1 -354 5801 5445 757 71 0 0 chr17 4929811 4929905 -80508575 + L1PA4 LINE L1 6055 6152 -3 2016 115 14 0 chr17 4930606 4930892 -80507588 + AluSq SINE Alu 1 290 -23 1382 180 11 18 chr17 4931023 4931326 -80507154 - AluSx SINE Alu 0 301 1 21 36 0 0 chr17 4931688 4931716 -80506764 + AT_rich Low_complexity Low_complexity 1 28 0 2131 156 99 17 chr17 4932083 4932505 -80505975 - MSTB2 LTR MaLR 0 457 1 683 281 92 39 chr17 4933694 4934181 -80504299 + L1ME4a LINE L1 5608 6120 -1 1287 152 0 0 chr17 4934261 4934458 -80504022 + AluJb SINE Alu 85 322 0 234 73 0 24 chr17 4934458 4934499 -80503981 + (CAAAA)n Simple_repeat Simple_repeat 1 175 0 183 244 89 67 chr17 4935627 4935717 -80502763 + L2 LINE L2 436 527 -2787 1641 154 44 17 chr17 4936389 4936682 -80501798 - AluJb SINE Alu -11 301 1 411 306 148 27 chr17 4938030 4938213 -80500267 + MIR SINE MIR 34 238 -24 542 205 74 95 chr17 4938254 4938305 -80500175 + Charlie1 DNA MER1_type 32 83 -2678 1994 130 0 19 chr17 4938305 4938620 -80499860 - AluJb SINE Alu -3 309 1 542 205 74 95 chr17 4938620 4938758 -80499722 + Charlie1 DNA MER1_type 83 217 -2544 486 165 52 0 chr17 4938768 4938865 -80499615 + Charlie1 DNA MER1_type 2630 2731 -30 205 276 51 71 chr17 4938901 4938999 -80499481 + MIR SINE MIR 162 257 -5 1433 170 48 15 chr17 4939950 4940255 -80498225 + AluJo SINE Alu 6 319 0 2184 94 0 29 chr17 4940762 4941070 -80497410 + AluSx SINE Alu 1 299 -13 1995 104 7 3 chr17 4941130 4941417 -80497063 + AluSc SINE Alu 3 290 -19 2097 119 6 72 chr17 4944020 4944381 -80494099 + MER1B DNA MER1_type 1 337 0 2335 93 3 0 chr17 4944989 4945300 -80493180 + AluSp SINE Alu 1 312 -1 438 263 97 41 chr17 4945566 4945789 -80492691 + L1MC/D LINE L1 2963 3211 -2935 2028 97 7 3 chr17 4945789 4946087 -80492393 + AluY SINE Alu 1 299 -12 438 263 97 41 chr17 4946087 4946182 -80492298 + L1MC/D LINE L1 3211 3299 -2847 946 88 0 0 chr17 4946300 4946425 -80492055 + AluSq/x SINE Alu 1 125 -187 2121 109 3 0 chr17 4946429 4946732 -80491748 + AluSg SINE Alu 1 304 -6 787 278 55 44 chr17 4946734 4947299 -80491181 + L1MC/D LINE L1 3422 3992 -2154 254 247 21 10 chr17 4947605 4947702 -80490778 + L1MC/D LINE L1 4272 4369 -1777 1779 121 10 39 chr17 4948934 4949240 -80489240 - AluSq SINE Alu -16 297 1 761 143 0 0 chr17 4949426 4949538 -80488942 + FLAM_C SINE Alu 6 117 -26 26 0 0 0 chr17 4949545 4949571 -80488909 + AT_rich Low_complexity Low_complexity 1 26 0 29 0 0 0 chr17 4953570 4953599 -80484881 + AT_rich Low_complexity Low_complexity 1 29 0 681 246 15 41 chr17 4953600 4953795 -80484685 - LTR41 LTR ERVL -583 190 1 2442 107 8 8 chr17 4954039 4954394 -80484086 - THE1A LTR MaLR 0 355 1 11942 84 11 5 chr17 4954394 4955964 -80482516 - THE1A-int LTR MaLR 0 1580 1 2444 102 11 8 chr17 4955964 4956318 -80482162 - THE1A LTR MaLR 0 355 1 1170 239 15 23 chr17 4956421 4956684 -80481796 + MIR SINE MIR 2 262 0 831 138 23 0 chr17 4956759 4956889 -80481591 - FLAM_C SINE Alu 0 133 1 2386 61 0 3 chr17 4957620 4957917 -80480563 - AluY SINE Alu -15 296 1 2062 120 13 0 chr17 4958074 4958382 -80480098 + AluSx SINE Alu 1 312 0 1503 194 39 8 chr17 4958384 4958744 -80479736 + L1MC/D LINE L1 4480 4850 -1296 2182 101 0 0 chr17 4958749 4959045 -80479435 - AluY SINE Alu -15 296 1 253 180 0 0 chr17 4959049 4959099 -80479381 + L1MA10 LINE L1 6285 6334 0 1648 88 0 0 chr17 4960416 4960633 -80477847 + AluSg/x SINE Alu 83 299 -11 184 313 127 45 chr17 4960754 4960888 -80477592 - L2 LINE L2 -218 3054 2910 360 270 36 0 chr17 4962185 4962296 -80476184 + L1MC/D LINE L1 5486 5600 -744 2209 113 0 0 chr17 4962422 4962731 -80475749 + AluSq SINE Alu 1 309 -4 303 124 101 34 chr17 4962731 4962787 -80475693 - LTR37A LTR ERV1 -8 418 352 1499 116 0 0 chr17 4962787 4962994 -80475486 + AluSg/x SINE Alu 85 291 -21 303 124 101 34 chr17 4962994 4963026 -80475454 - LTR37A LTR ERV1 -74 352 324 347 107 0 0 chr17 4963032 4963088 -80475392 + Alu SINE Alu 247 302 0 686 193 33 82 chr17 4963094 4963165 -80475315 - LTR37A LTR ERV1 -111 315 242 4423 131 68 30 chr17 4963165 4963334 -80475146 + LTR39 LTR ERV1 1 162 -621 1998 111 0 20 chr17 4963334 4963665 -80474815 + AluSx SINE Alu 1 312 0 4423 131 68 30 chr17 4963665 4964080 -80474400 + LTR39 LTR ERV1 162 622 -161 2398 81 0 0 chr17 4964080 4964388 -80474092 + AluSx SINE Alu 1 308 -4 4423 131 68 30 chr17 4964388 4964557 -80473923 + LTR39 LTR ERV1 622 783 0 686 193 33 82 chr17 4964557 4964728 -80473752 - LTR37A LTR ERV1 -184 242 85 3184 123 35 0 chr17 4964744 4965206 -80473274 + MER1A DNA MER1_type 37 514 -15 1969 87 21 24 chr17 4965329 4965617 -80472863 - AluSc SINE Alu -14 295 9 897 169 38 0 chr17 4965641 4965801 -80472679 - FRAM SINE Alu 0 166 1 2368 57 0 10 chr17 4966330 4966629 -80471851 + AluSg SINE Alu 4 299 -11 2580 162 19 71 chr17 4966853 4966882 -80471598 + L1MB2 LINE L1 5446 5475 -696 222 37 0 0 chr17 4966882 4966909 -80471571 + (CA)n Simple_repeat Simple_repeat 2 28 0 2580 162 19 71 chr17 4966909 4967245 -80471235 + L1MB2 LINE L1 5475 5827 -344 2222 91 0 0 chr17 4967245 4967541 -80470939 + AluSx SINE Alu 1 296 -16 2580 162 19 71 chr17 4967541 4967664 -80470816 + L1MB2 LINE L1 5827 5901 -270 2272 96 0 0 chr17 4967664 4967957 -80470523 + AluSx SINE Alu 3 295 -17 2580 162 19 71 chr17 4967957 4968054 -80470426 + L1MB2 LINE L1 5901 6002 -169 22 70 0 0 chr17 4968113 4968156 -80470324 + AT_rich Low_complexity Low_complexity 1 43 0 1452 139 7 85 chr17 4968156 4968206 -80470274 + Tigger2 DNA MER2_type 2446 2498 -220 2107 88 12 34 chr17 4968206 4968526 -80469954 - AluSp SINE Alu 0 313 1 2029 133 3 0 chr17 4968526 4968827 -80469653 - AluSx SINE Alu -10 302 1 1452 139 7 85 chr17 4968827 4969070 -80469410 + Tigger2 DNA MER2_type 2496 2717 -1 194 200 160 20 chr17 4969088 4969138 -80469342 + L2 LINE L2 3024 3080 -233 697 239 133 70 chr17 4969138 4969428 -80469052 + L1MEc LINE L1 805 1140 -5256 2263 91 7 0 chr17 4969428 4969737 -80468743 + AluSp SINE Alu 1 311 -2 697 239 133 70 chr17 4969737 4969944 -80468536 + L1MEc LINE L1 1140 1333 -5063 721 170 7 21 chr17 4970205 4970346 -80468134 - AluY SINE Alu -22 289 151 278 150 0 0 chr17 4970346 4970386 -80468094 - Alu SINE Alu -259 40 1 266 188 12 47 chr17 4970388 4970473 -80468007 + L1MC4a LINE L1 5858 5939 -1869 2148 112 0 0 chr17 4970473 4970777 -80467703 + AluSq SINE Alu 1 304 -9 4215 185 43 21 chr17 4970833 4971502 -80466978 - L1MB7 LINE L1 0 6184 5531 2039 112 7 7 chr17 4971502 4971798 -80466682 - AluSq SINE Alu -17 296 1 4215 185 43 21 chr17 4971798 4972125 -80466355 - L1MB7 LINE L1 -653 5531 5212 2136 113 6 0 chr17 4972125 4972436 -80466044 - AluSp SINE Alu 0 313 1 4215 185 43 21 chr17 4972436 4972905 -80465575 - L1MB7 LINE L1 -972 5212 4683 351 125 0 0 chr17 4972911 4972959 -80465521 + Alu SINE Alu 1 48 -253 1267 281 93 21 chr17 4973092 4973662 -80464818 - HsTC2a DNA Tc2 0 744 134 204 40 0 0 chr17 4973878 4973903 -80464577 + (TTCA)n Simple_repeat Simple_repeat 4 28 0 817 192 13 0 chr17 4974396 4974552 -80463928 + MLT1B LTR MaLR 192 349 -41 247 162 0 0 chr17 4974595 4974632 -80463848 + MLT1B LTR MaLR 354 390 0 2063 77 6 45 chr17 4974691 4975003 -80463477 - AluSg SINE Alu -9 301 2 629 283 80 23 chr17 4975012 4975312 -80463168 + L1MC/D LINE L1 5479 5795 -2013 1898 129 0 17 chr17 4975324 4975619 -80462861 + AluJb SINE Alu 11 300 -12 2707 6 0 22 chr17 4975619 4975936 -80462544 + AluY SINE Alu 1 310 -1 2204 105 0 0 chr17 4975936 4976230 -80462250 + AluSp SINE Alu 1 294 -19 1177 135 0 0 chr17 4976230 4976408 -80462072 + AluSc SINE Alu 132 309 0 1136 142 0 0 chr17 4976911 4977080 -80461400 - AluJb SINE Alu -143 169 1 2200 73 7 17 chr17 4977712 4978012 -80460468 - AluY SINE Alu -14 297 1 413 115 16 0 chr17 4978285 4978346 -80460134 - AluS SINE Alu -255 63 2 2299 80 0 0 chr17 4978431 4978730 -80459750 + AluSg SINE Alu 1 299 -11 333 280 131 0 chr17 4978947 4979054 -80459426 + MIR3 SINE MIR 36 156 -52 224 283 17 0 chr17 4979336 4979396 -80459084 - L2 LINE L2 -273 3040 2980 2061 121 3 10 chr17 4980119 4980433 -80458047 - AluSp SINE Alu 0 313 2 1123 224 92 7 chr17 4980758 4981039 -80457441 + MLT1D LTR MaLR 41 345 -160 1778 148 7 3 chr17 4981214 4981521 -80456959 - AluJo SINE Alu 0 308 1 494 238 61 37 chr17 4981587 4981751 -80456729 + MLT1H1 LTR MaLR 10 177 -413 710 96 0 0 chr17 4981754 4981848 -80456632 + AluSg1 SINE Alu 2 95 -214 830 215 37 19 chr17 4983046 4983260 -80455220 + LTR7 LTR ERV1 233 450 0 1455 94 5 0 chr17 4983260 4983463 -80455017 + AluSg1 SINE Alu 93 296 -16 798 261 92 38 chr17 4983466 4983834 -80454646 + MLT1H1 LTR MaLR 168 555 0 599 208 219 6 chr17 4984102 4984280 -80454200 + MLT1D LTR MaLR 290 505 0 2319 88 0 3 chr17 4984311 4984619 -80453861 - AluSx SINE Alu -5 307 1 856 169 5 77 chr17 4984928 4985123 -80453357 + LTR62 LTR ERVK 1 181 -538 1214 206 0 23 chr17 4985148 4985449 -80453031 + AluSg SINE Alu 1 294 -16 2278 66 3 10 chr17 4985532 4985835 -80452645 + AluSp SINE Alu 1 301 -12 2205 113 0 3 chr17 4985844 4986155 -80452325 + AluSq SINE Alu 1 310 -3 1507 123 0 25 chr17 4986211 4986446 -80452034 + AluSq SINE Alu 85 313 0 5013 78 39 58 chr17 4986450 4987306 -80451174 + SVA Other Other 29 867 -519 244 323 10 10 chr17 4987437 4987536 -80450944 + L1MC4a LINE L1 5755 5853 -1955 802 134 0 0 chr17 4987551 4987670 -80450810 - AluSp/q SINE Alu -19 294 176 947 138 0 7 chr17 4987670 4987822 -80450658 - AluSg/x SINE Alu -8 302 152 293 143 0 0 chr17 4987822 4987864 -80450616 - Alu SINE Alu -259 42 1 289 191 12 36 chr17 4987866 4987950 -80450530 + L1MC4a LINE L1 5858 5939 -1869 1631 113 0 0 chr17 4987950 4988181 -80450299 + AluSx SINE Alu 1 231 -81 1387 141 0 0 chr17 4988282 4988495 -80449985 + AluSg/x SINE Alu 98 310 0 337 257 37 37 chr17 4988540 4988649 -80449831 + MIR SINE MIR 154 262 0 1719 148 16 29 chr17 4988770 4989080 -80449400 + AluSx SINE Alu 1 306 -6 1994 104 0 11 chr17 4989140 4989451 -80449029 + AluSx SINE Alu 1 308 0 863 91 0 0 chr17 4989474 4989584 -80448896 + AluSq/x SINE Alu 1 110 -203 225 94 0 0 chr17 4990027 4990059 -80448421 + (T)n Simple_repeat Simple_repeat 1 32 0 761 147 0 0 chr17 4990060 4990176 -80448304 - AluSc SINE Alu -62 247 132 1969 122 3 7 chr17 4990176 4990470 -80448010 - AluSx SINE Alu -19 293 1 697 203 8 8 chr17 4991283 4991416 -80447064 + FLAM_A SINE Alu 1 133 0 2048 95 10 23 chr17 4991854 4992159 -80446321 - AluSp SINE Alu -12 301 1 257 283 33 0 chr17 4992196 4992256 -80446224 - L2 LINE L2 -54 3218 3157 713 204 119 6 chr17 4992288 4992464 -80446016 - MIR SINE MIR -48 214 19 606 160 40 8 chr17 4992464 4992589 -80445891 - L1MB8 LINE L1 -1 6177 6049 1104 179 0 0 chr17 4992589 4992785 -80445695 - AluJb SINE Alu -6 306 111 180 0 0 0 chr17 4992785 4992805 -80445675 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 1841 115 25 4 chr17 4992805 4993083 -80445397 - AluSx SINE Alu -27 285 2 3227 219 104 66 chr17 4993086 4993600 -80444880 - L1M4 LINE L1 -863 5283 4790 2093 123 0 22 chr17 4993600 4993918 -80444562 - AluSx SINE Alu -1 311 1 3227 219 104 66 chr17 4993918 4994147 -80444333 - L1M4 LINE L1 -1356 4790 4571 261 108 0 0 chr17 4994147 4994184 -80444296 + THE1B LTR MaLR 328 364 0 3227 219 104 66 chr17 4994184 4994309 -80444171 - L1M4 LINE L1 -1575 4571 4452 1719 168 0 7 chr17 4994309 4994606 -80443874 + AluJb SINE Alu 1 295 -17 3227 219 104 66 chr17 4994606 4995176 -80443304 - L1M4 LINE L1 -1694 4452 3750 808 171 0 49 chr17 4995180 4995192 -80443288 - AluSg/x SINE Alu -23 289 278 1765 156 0 10 chr17 4995192 4995493 -80442987 - AluJb SINE Alu -13 299 2 243 0 0 0 chr17 4995493 4995520 -80442960 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 808 171 0 49 chr17 4995520 4995670 -80442810 - AluSg/x SINE Alu -32 280 134 1860 142 10 3 chr17 4995670 4995973 -80442507 - AluSx SINE Alu -7 305 1 701 243 177 54 chr17 4996599 4996751 -80441729 - MLT1D LTR MaLR 0 390 258 2258 92 3 3 chr17 4996751 4997056 -80441424 - AluSx SINE Alu -7 305 1 701 243 177 54 chr17 4997056 4997294 -80441186 - MLT1D LTR MaLR -132 258 1 1079 172 35 25 chr17 4998146 4998349 -80440131 + AluJo SINE Alu 86 290 -22 304 292 211 44 chr17 4999657 5000017 -80438463 + L2 LINE L2 664 1083 -2231 1008 266 51 43 chr17 5000043 5000393 -80438087 + MER67C LTR ERV1 157 509 -201 2044 132 3 0 chr17 5000393 5000696 -80437784 + AluSx SINE Alu 1 304 -8 1177 168 0 26 chr17 5000760 5000992 -80437488 - AluJb SINE Alu -2 310 85 687 181 0 0 chr17 5000992 5001097 -80437383 - AluSg/x SINE Alu -62 250 146 23 0 0 0 chr17 5001982 5002005 -80436475 + GC_rich Low_complexity Low_complexity 1 23 0 390 313 50 56 chr17 5003214 5003393 -80435087 + MER5B DNA MER1_type 1 178 0 2169 96 0 3 chr17 5003676 5003969 -80434511 + AluSq SINE Alu 1 292 -21 230 317 39 29 chr17 5004049 5004153 -80434327 + L2 LINE L2 2928 3032 -240 719 140 18 0 chr17 5004746 5004860 -80433620 + FLAM_C SINE Alu 2 117 -26 21 57 0 0 chr17 5004860 5004895 -80433585 + AT_rich Low_complexity Low_complexity 1 35 0 2053 117 3 0 chr17 5006277 5006576 -80431904 + AluSg SINE Alu 1 300 -10 209 301 243 10 chr17 5008567 5008670 -80429810 + MIR3 SINE MIR 4 130 -78 407 113 0 0 chr17 5008697 5008768 -80429712 - Alu SINE Alu -1 310 240 297 145 84 72 chr17 5009009 5009092 -80429388 + FAM SINE Alu 61 144 -31 251 143 0 24 chr17 5009078 5009120 -80429360 + FAM SINE Alu 104 144 -35 * 1596 181 0 0 chr17 5009125 5009395 -80429085 + AluJb SINE Alu 22 291 -21 581 286 160 6 chr17 5009468 5009793 -80428687 - L1ME LINE L1 -317 5804 5430 1459 166 0 46 chr17 5009856 5010140 -80428340 - AluJo SINE Alu -37 275 5 21 0 0 0 chr17 5010143 5010164 -80428316 + AT_rich Low_complexity Low_complexity 1 21 0 1506 197 106 6 chr17 5010168 5010498 -80427982 - L1MC4 LINE L1 -1139 6903 6541 1395 203 52 41 chr17 5010729 5011118 -80427362 - L1ME2 LINE L1 -20 6144 5755 2108 114 3 0 chr17 5011414 5011721 -80426759 - AluSx SINE Alu -1 311 4 315 275 75 6 chr17 5011722 5011882 -80426598 - L1ME LINE L1 -677 5444 5274 1612 100 118 42 chr17 5012130 5012460 -80426020 - L1MB3 LINE L1 -1 6182 5828 1352 124 9 14 chr17 5012460 5012670 -80425810 - AluSg/x SINE Alu -13 297 89 2246 75 3 3 chr17 5012670 5012965 -80425515 + AluSx SINE Alu 6 300 -12 283 168 158 42 chr17 5012965 5013060 -80425420 - L1MB3 LINE L1 -372 5799 5694 26 50 0 0 chr17 5014384 5014424 -80424056 + AT_rich Low_complexity Low_complexity 1 40 0 872 115 0 23 chr17 5014424 5014554 -80423926 - FLAM_C SINE Alu -16 127 1 225 146 0 0 chr17 5014555 5014603 -80423877 + (T)n Simple_repeat Simple_repeat 1 48 0 234 209 0 0 chr17 5016539 5016582 -80421898 + L2 LINE L2 2715 2757 -557 260 246 146 27 chr17 5016835 5016945 -80421535 - LTR11 LTR ERV -217 467 345 388 246 153 16 chr17 5017478 5017661 -80420819 + Charlie8 DNA MER1_type 35 242 -2175 213 193 0 136 chr17 5018516 5018604 -80419876 + MIR SINE MIR 116 191 -71 2355 60 3 10 chr17 5018733 5019047 -80419433 + AluSp SINE Alu 1 312 -1 2312 142 28 73 chr17 5020296 5020805 -80417675 - LTR19A LTR ERV1 0 486 1 3068 63 8 0 chr17 5020805 5021184 -80417296 - LTR19A-int LTR ERV1 0 5586 5205 3106 124 0 0 chr17 5021211 5021662 -80416818 - PABL_A-int LTR ERV1 -2039 2976 2526 1424 182 113 31 chr17 5021809 5022128 -80416352 - MER47A DNA MER2_type -2 364 20 881 195 32 45 chr17 5022556 5022777 -80415703 + MER46A DNA MER2_type 2 219 -17 198 328 166 20 chr17 5022777 5023030 -80415450 - L2 LINE L2 -2127 1187 898 207 323 168 19 chr17 5023106 5023267 -80415213 - L2 LINE L2 -16 3297 3113 636 269 29 43 chr17 5023546 5023825 -80414655 - L1ME LINE L1 -369 5752 5478 1689 171 20 0 chr17 5023872 5024170 -80414310 - AluJb SINE Alu -8 304 1 1715 150 17 3 chr17 5024178 5024472 -80414008 - AluJo SINE Alu -1 311 14 2018 96 17 14 chr17 5025134 5025426 -80413054 - AluSg SINE Alu -17 293 1 441 261 14 70 chr17 5025520 5025662 -80412818 + L2 LINE L2 3139 3272 0 2409 76 0 0 chr17 5025984 5026287 -80412193 + AluSx SINE Alu 1 303 -9 1469 92 0 5 chr17 5026375 5026581 -80411899 + AluSx SINE Alu 1 205 -107 2029 76 42 21 chr17 5026602 5026890 -80411590 - AluY SINE Alu -15 296 3 2277 95 0 0 chr17 5027417 5027723 -80410757 + AluSx SINE Alu 1 306 -6 254 219 67 92 chr17 5027859 5027910 -80410570 + MER112 DNA MER1_type 1 52 -208 2313 81 0 0 chr17 5027910 5028208 -80410272 + AluY SINE Alu 1 298 -13 254 219 67 92 chr17 5028208 5028275 -80410205 + MER112 DNA MER1_type 52 116 -144 872 138 7 22 chr17 5028277 5028415 -80410065 + AluJo SINE Alu 1 136 -176 1716 152 24 7 chr17 5028494 5028784 -80409696 + AluJo SINE Alu 1 295 -17 24 32 0 0 chr17 5028986 5029017 -80409463 + AT_rich Low_complexity Low_complexity 1 31 0 1646 174 3 7 chr17 5029021 5029308 -80409172 - AluJo SINE Alu -26 286 1 249 285 78 66 chr17 5029311 5029553 -80408927 - HAL1 LINE L1 0 2507 2263 617 230 0 0 chr17 5029631 5029757 -80408723 - FLAM_A SINE Alu -7 126 1 270 279 23 76 chr17 5029892 5030064 -80408416 - HAL1 LINE L1 -543 1964 1802 300 261 33 11 chr17 5030084 5030176 -80408304 - HAL1 LINE L1 -2090 417 324 37 81 0 0 chr17 5030502 5030588 -80407892 + AT_rich Low_complexity Low_complexity 1 86 0 1783 141 57 0 chr17 5030600 5030883 -80407597 - AluSx SINE Alu -13 299 1 2068 78 0 4 chr17 5030897 5031167 -80407313 - AluSx SINE Alu -11 301 33 333 115 0 0 chr17 5031618 5031679 -80406801 - AluJo SINE Alu -1 301 241 927 189 0 22 chr17 5031679 5031859 -80406621 - AluJo SINE Alu -136 176 1 430 276 104 27 chr17 5032515 5032736 -80405744 - MIR SINE MIR -12 250 13 443 231 56 0 chr17 5033846 5033954 -80404526 - MER81 DNA DNA 0 114 1 815 140 70 0 chr17 5034827 5034970 -80403510 - FAM SINE Alu -21 164 12 211 37 0 0 chr17 5035476 5035503 -80402977 + (TTTA)n Simple_repeat Simple_repeat 2 156 0 881 151 0 7 chr17 5035503 5035649 -80402831 - AluJb SINE Alu -1 310 140 2175 102 3 3 chr17 5035662 5035966 -80402514 - AluSx SINE Alu -8 304 1 297 252 26 52 chr17 5036300 5036415 -80402065 - L1ME LINE L1 -309 5855 5744 2037 120 3 0 chr17 5036819 5037111 -80401369 + AluSx SINE Alu 1 293 -19 362 267 17 97 chr17 5038320 5038487 -80399993 - MIR SINE MIR -19 243 89 2070 120 0 16 chr17 5038487 5038795 -80399685 + AluSx SINE Alu 1 303 -9 343 226 88 38 chr17 5038810 5038969 -80399511 - L1ME LINE L1 -770 5376 5210 657 192 146 0 chr17 5039141 5039271 -80399209 + FRAM SINE Alu 1 146 -30 21 82 0 0 chr17 5039603 5039652 -80398828 + AT_rich Low_complexity Low_complexity 1 49 0 446 214 65 54 chr17 5039730 5039898 -80398582 - L1ME4a LINE L1 0 6121 5952 2104 84 0 52 chr17 5039996 5040327 -80398153 - AluSx SINE Alu 0 315 1 1845 80 109 11 chr17 5040576 5040851 -80397629 - AluSc SINE Alu -7 302 1 1017 83 0 0 chr17 5040855 5040988 -80397492 - AluSq/x SINE Alu -180 133 1 227 247 86 37 chr17 5041593 5041674 -80396806 - MIR SINE MIR 0 262 178 539 246 16 0 chr17 5041720 5041842 -80396638 - MIR SINE MIR -77 185 62 215 265 0 0 chr17 5041878 5041927 -80396553 - L2 LINE L2 -227 3045 2997 1780 158 0 17 chr17 5041945 5042242 -80396238 + AluSx SINE Alu 1 292 -20 2346 87 0 0 chr17 5042845 5043154 -80395326 + AluSx SINE Alu 1 309 -3 414 273 77 28 chr17 5044240 5044383 -80394097 + MIR SINE MIR 77 226 -36 298 149 15 90 chr17 5045106 5045173 -80393307 - U7 snRNA snRNA -1 62 1 187 211 225 0 chr17 5045263 5045334 -80393146 + MIR3 SINE MIR 107 193 -15 225 0 0 0 chr17 5045948 5045973 -80392507 + (A)n Simple_repeat Simple_repeat 1 25 0 518 48 0 0 chr17 5045983 5046046 -80392434 + AluS SINE Alu 2 64 -248 1758 140 24 10 chr17 5046046 5046338 -80392142 + AluSx SINE Alu 16 311 -1 1191 191 108 0 chr17 5047476 5047717 -80390763 - MER21B LTR ERV1 -305 558 292 2959 147 75 10 chr17 5047988 5048506 -80389974 - MER21A LTR ERV1 -2 929 378 1639 103 63 16 chr17 5048513 5048765 -80389715 - MER21A LTR ERV1 -667 264 1 1591 126 89 0 chr17 5050615 5050886 -80387594 + AluSg SINE Alu 3 297 -13 1097 211 50 18 chr17 5050927 5051206 -80387274 - L1MB7 LINE L1 0 6184 5897 1855 92 42 0 chr17 5051220 5051482 -80386998 - AluSg SINE Alu -33 277 5 931 177 61 140 chr17 5051486 5051865 -80386615 - L1MB7 LINE L1 -838 5308 4960 2160 76 0 57 chr17 5052159 5052476 -80386004 - AluSc SINE Alu -10 299 1 2369 59 0 0 chr17 5053470 5053759 -80384721 + AluSc SINE Alu 13 301 -8 252 301 92 46 chr17 5054097 5054270 -80384210 - MIR3 SINE MIR -7 201 21 869 85 78 0 chr17 5056222 5056351 -80382129 + MER85 DNA T2_type 1 139 0 1814 155 7 0 chr17 5056723 5057019 -80381461 - AluSx SINE Alu -14 298 1 2179 112 0 6 chr17 5057728 5058041 -80380439 - AluSq SINE Alu -2 311 1 2148 101 0 0 chr17 5058051 5058338 -80380142 - AluSx SINE Alu -25 287 1 208 240 73 62 chr17 5058455 5058551 -80379929 - L2 LINE L2 -316 2956 2860 384 282 26 34 chr17 5058665 5058782 -80379698 + MIR3 SINE MIR 15 130 -78 189 171 0 0 chr17 5059435 5059470 -80379010 + (CATA)n Simple_repeat Simple_repeat 2 36 0 2252 94 0 0 chr17 5060793 5061090 -80377390 + AluSx SINE Alu 6 302 -10 2212 89 0 10 chr17 5061282 5061584 -80376896 + AluSg SINE Alu 1 299 -11 723 218 0 0 chr17 5061720 5061844 -80376636 + MER63A DNA MER1_type 50 173 -37 2139 96 7 7 chr17 5062588 5062891 -80375589 + AluSx SINE Alu 1 303 -9 253 234 252 47 chr17 5062963 5063070 -80375410 - L2 LINE L2 -2 3270 3142 811 219 14 0 chr17 5063083 5063229 -80375251 + MER58B DNA MER1_type 194 341 0 607 295 163 18 chr17 5063443 5063670 -80374810 - MIR SINE MIR -2 260 1 386 305 114 0 chr17 5063658 5063789 -80374691 - MIR SINE MIR 0 262 117 * 819 170 7 27 chr17 5063794 5063941 -80374539 + AluJ SINE Alu 2 145 -167 1718 166 0 17 chr17 5063943 5064245 -80374235 + AluJb SINE Alu 13 309 -3 22 0 0 0 chr17 5064277 5064299 -80374181 + AT_rich Low_complexity Low_complexity 1 22 0 1081 132 42 0 chr17 5064299 5064466 -80374014 + AluJ SINE Alu 129 302 -10 1527 170 22 58 chr17 5064683 5064994 -80373486 - AluJo SINE Alu 0 302 3 253 281 37 12 chr17 5065022 5065104 -80373376 + MIR SINE MIR 8 91 -171 361 335 64 6 chr17 5065721 5065894 -80372586 + MIR SINE MIR 80 262 0 347 306 116 16 chr17 5065965 5066086 -80372394 - MIR SINE MIR -58 150 18 1580 107 37 12 chr17 5066182 5066425 -80372055 + AluSx SINE Alu 47 295 -17 196 300 0 0 chr17 5066453 5066503 -80371977 + MER5A DNA MER1_type 81 130 -59 796 234 112 0 chr17 5067271 5067468 -80371012 + MER20 DNA MER1_type 1 219 0 269 253 72 24 chr17 5068212 5068295 -80370185 - L2 LINE L2 -953 2361 2275 262 303 64 9 chr17 5069096 5069205 -80369275 - L2 LINE L2 -176 3137 3023 2094 91 7 0 chr17 5069672 5069958 -80368522 + AluSx SINE Alu 1 288 -24 260 225 67 67 chr17 5070020 5070056 -80368424 + L2 LINE L2 3140 3175 -138 2174 91 7 13 chr17 5070056 5070364 -80368116 - AluSq SINE Alu -7 306 1 180 0 0 0 chr17 5070366 5070386 -80368094 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 1832 142 0 0 chr17 5070386 5070667 -80367813 - AluSx SINE Alu -31 281 1 260 225 67 67 chr17 5070667 5070715 -80367765 + L2 LINE L2 3174 3228 -85 898 164 0 44 chr17 5070739 5070922 -80367558 - AluJb SINE Alu -13 299 125 1317 163 47 57 chr17 5071090 5071391 -80367089 + AluJb SINE Alu 2 299 -3 222 37 0 0 chr17 5072016 5072043 -80366437 + (TG)n Simple_repeat Simple_repeat 2 28 0 2346 95 0 0 chr17 5072057 5072361 -80366119 - AluSx SINE Alu -8 304 1 446 117 0 0 chr17 5072429 5072489 -80365991 - Tigger5 DNA MER2_type 0 2323 2264 323 182 0 0 chr17 5072511 5072566 -80365914 + Tigger5 DNA MER2_type 1 55 -2268 248 86 224 52 chr17 5072535 5072593 -80365887 + Tigger5 DNA MER2_type 2251 2318 -5 * 309 289 51 64 chr17 5072669 5072825 -80365655 + MIR SINE MIR 59 212 -50 1859 146 3 3 chr17 5072904 5073206 -80365274 + AluSx SINE Alu 1 302 -10 39 0 0 0 chr17 5073206 5073245 -80365235 + AT_rich Low_complexity Low_complexity 1 39 0 590 100 0 0 chr17 5073245 5073325 -80365155 - AluSg/x SINE Alu -18 294 215 1697 129 19 0 chr17 5073328 5073584 -80364896 - AluSx SINE Alu -51 261 1 2084 102 3 3 chr17 5073729 5074023 -80364457 + AluSp SINE Alu 1 294 -19 336 330 40 17 chr17 5074512 5074688 -80363792 + MIR3 SINE MIR 20 199 -9 1178 164 45 0 chr17 5074952 5075153 -80363327 + AluJb SINE Alu 1 210 -102 444 167 0 83 chr17 5075691 5075787 -80362693 - Tigger7 DNA MER2_type -11 2476 2389 310 98 0 0 chr17 5075785 5075826 -80362654 - Tigger7 DNA MER2_type -284 266 226 * 2240 88 0 52 chr17 5076613 5076942 -80361538 - AluSx SINE Alu 0 312 1 209 364 53 30 chr17 5076953 5077085 -80361395 - L2 LINE L2 -5 3267 3133 753 117 8 17 chr17 5077646 5077766 -80360714 - AluJb SINE Alu -183 129 11 1033 273 145 26 chr17 5078055 5078640 -80359840 + L2 LINE L2 2661 3304 -9 486 278 88 78 chr17 5078647 5078827 -80359653 - L1ME4a LINE L1 -95 6026 5840 2480 69 0 0 chr17 5078827 5079132 -80359348 - AluSq SINE Alu -8 305 1 486 278 88 78 chr17 5079132 5079257 -80359223 - L1ME4a LINE L1 -281 5840 5718 185 330 11 78 chr17 5079780 5079959 -80358521 - L2 LINE L2 -76 3196 3030 1191 106 156 0 chr17 5081331 5081435 -80357045 - MER30 DNA MER1_type 0 230 144 195 42 0 0 chr17 5081435 5081459 -80357021 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 1191 106 156 0 chr17 5081459 5081553 -80356927 - MER30 DNA MER1_type -86 144 1 302 319 173 34 chr17 5082180 5082594 -80355886 - L2 LINE L2 -1010 2304 1822 917 164 41 55 chr17 5082594 5082813 -80355667 - MER20 DNA MER1_type -1 218 3 302 319 173 34 chr17 5082813 5082843 -80355637 - L2 LINE L2 -1492 1822 1798 192 304 139 13 chr17 5083167 5083246 -80355234 + L2 LINE L2 3166 3254 -18 2208 105 0 3 chr17 5083579 5083893 -80354587 - AluSq SINE Alu 0 313 1 1066 145 17 138 chr17 5084376 5084541 -80353939 + L1MA5 LINE L1 5601 5784 -519 1685 136 3 48 chr17 5084541 5084720 -80353760 - AluSx SINE Alu 0 305 144 2144 108 0 3 chr17 5084720 5085027 -80353453 - AluSg SINE Alu -3 307 2 1685 136 3 48 chr17 5085027 5085165 -80353315 - AluSx SINE Alu -161 144 1 1066 145 17 138 chr17 5085165 5085233 -80353247 + L1MA5 LINE L1 5784 5796 -507 1501 182 52 0 chr17 5085233 5085502 -80352978 - AluJb SINE Alu -19 283 1 1066 145 17 138 chr17 5085502 5085556 -80352924 + L1MA5 LINE L1 5796 5855 -448 186 194 76 6 chr17 5085728 5085799 -80352681 - MIR SINE MIR -31 177 100 2064 121 33 10 chr17 5085884 5086189 -80352291 - AluSp SINE Alu -1 312 1 2321 88 7 0 chr17 5086825 5087122 -80351358 - AluSp SINE Alu -14 299 1 30 0 0 0 chr17 5087128 5087158 -80351322 + AT_rich Low_complexity Low_complexity 1 30 0 2423 76 10 0 chr17 5087706 5088007 -80350473 - AluSg SINE Alu -6 304 1 576 169 127 28 chr17 5088030 5088172 -80350308 + Tigger1 DNA MER2_type 2 157 -2261 * 1096 158 32 50 chr17 5088161 5088382 -80350098 + Tigger1 DNA MER2_type 2202 2418 0 466 226 101 32 chr17 5088709 5088989 -80349491 + L1MB8 LINE L1 3120 3438 -2708 180 0 0 0 chr17 5089013 5089033 -80349447 + (A)n Simple_repeat Simple_repeat 1 20 0 2495 63 0 10 chr17 5089033 5089333 -80349147 + AluY SINE Alu 1 297 -14 2275 84 7 17 chr17 5089333 5089629 -80348851 + AluSc SINE Alu 1 293 -16 2213 103 3 7 chr17 5089633 5089934 -80348546 + AluSx SINE Alu 1 300 -12 1959 121 32 38 chr17 5090021 5090335 -80348145 + AluSx SINE Alu 1 312 0 480 199 14 55 chr17 5090362 5090508 -80347972 + L1MB8 LINE L1 3916 4055 -2091 1307 224 116 14 chr17 5090513 5090866 -80347614 - MLT1D LTR MaLR -2 503 115 1836 157 0 14 chr17 5090873 5091166 -80347314 - AluJb SINE Alu -23 289 1 382 198 124 8 chr17 5091166 5091287 -80347193 + L1MB8 LINE L1 5149 5283 -863 3615 162 51 48 chr17 5091305 5092003 -80346477 + L1MB8 LINE L1 5365 6067 -111 2228 106 0 3 chr17 5092003 5092296 -80346184 - AluSq SINE Alu -21 292 1 3615 162 51 48 chr17 5092296 5092404 -80346076 + L1MB8 LINE L1 6067 6173 -5 1875 127 46 3 chr17 5092406 5092689 -80345791 + AluSx SINE Alu 1 295 -17 1147 143 16 108 chr17 5092697 5092955 -80345525 + MER46A DNA MER2_type 2 235 -1 419 324 66 28 chr17 5093486 5093548 -80344932 + L2 LINE L2 2908 2966 -306 225 0 0 0 chr17 5093548 5093573 -80344907 + (CCCCAG)n Simple_repeat Simple_repeat 1 25 0 419 324 66 28 chr17 5093573 5093797 -80344683 + L2 LINE L2 2966 3205 -67 758 296 76 29 chr17 5093807 5094296 -80344184 + L2 LINE L2 1967 2478 -836 2211 122 0 3 chr17 5094490 5094793 -80343687 + AluSg SINE Alu 3 304 -6 1770 148 17 44 chr17 5094828 5094969 -80343511 + AluJb SINE Alu 1 144 -168 2274 90 3 17 chr17 5094969 5095268 -80343212 + AluSg SINE Alu 1 295 -15 1770 148 17 44 chr17 5095268 5095423 -80343057 + AluJb SINE Alu 144 289 -23 283 179 73 113 chr17 5095510 5095661 -80342819 + L1ME3 LINE L1 5940 6084 -78 372 282 77 45 chr17 5096948 5097202 -80341278 - MIR SINE MIR -4 258 1 1498 142 120 29 chr17 5097249 5097524 -80340956 + AluJo SINE Alu 1 300 -12 2376 87 7 0 chr17 5098042 5098340 -80340140 - AluSx SINE Alu -12 300 1 2341 103 7 0 chr17 5098428 5098728 -80339752 - AluSx SINE Alu -10 302 1 241 233 35 47 chr17 5099050 5099136 -80339344 + MARNA DNA Mariner 426 510 -76 2074 106 11 11 chr17 5099636 5099919 -80338561 + AluY SINE Alu 1 283 -28 2245 110 0 7 chr17 5099923 5100231 -80338249 + AluSx SINE Alu 1 306 -6 23 0 0 0 chr17 5105232 5105255 -80333225 + AT_rich Low_complexity Low_complexity 1 23 0 943 144 0 60 chr17 5105284 5105451 -80333029 - AluSq SINE Alu -21 292 136 2084 137 0 10 chr17 5105458 5105757 -80332723 - AluSx SINE Alu -16 296 1 2291 108 0 0 chr17 5105844 5106140 -80332340 + AluSx SINE Alu 3 298 -14 263 313 0 0 chr17 5108115 5108179 -80330301 - L2 LINE L2 -189 3083 3020 214 272 72 24 chr17 5108731 5108856 -80329624 - L2 LINE L2 -1552 1762 1632 2350 79 10 7 chr17 5110398 5110703 -80327777 + AluSp SINE Alu 1 306 -7 203 299 52 13 chr17 5111543 5111620 -80326860 - L2 LINE L2 0 3272 3193 891 175 6 47 chr17 5111878 5112049 -80326431 - FRAM SINE Alu -2 164 1 1544 128 128 12 chr17 5112085 5112361 -80326119 + AluSg SINE Alu 4 308 0 1574 154 0 55 chr17 5112502 5112814 -80325666 - AluJb SINE Alu -17 295 1 189 107 0 0 chr17 5113100 5113128 -80325352 + (A)n Simple_repeat Simple_repeat 1 28 0 2075 96 0 77 chr17 5113147 5113282 -80325198 + AluSx SINE Alu 1 145 -167 2120 113 3 28 chr17 5113282 5113600 -80324880 + AluSg SINE Alu 1 310 0 2075 96 0 77 chr17 5113600 5113788 -80324692 + AluSx SINE Alu 145 299 -13 1549 133 12 8 chr17 5113910 5114151 -80324329 + AluSx SINE Alu 55 296 -16 826 189 47 11 chr17 5114294 5114484 -80323996 + L1MB8 LINE L1 5842 6038 -140 432 0 0 0 chr17 5114486 5114534 -80323946 + (TG)n Simple_repeat Simple_repeat 2 49 0 755 161 35 0 chr17 5114558 5114701 -80323779 + L1MB7 LINE L1 6027 6174 -10 1870 134 13 17 chr17 5115170 5115468 -80323012 + AluSx SINE Alu 1 297 -15 2135 58 0 12 chr17 5115862 5116121 -80322359 - AluY SINE Alu -55 256 1 807 228 55 81 chr17 5116152 5116213 -80322267 - L1M4 LINE L1 -1455 4691 4630 1917 102 12 0 chr17 5116213 5116469 -80322011 + AluSp SINE Alu 37 295 -18 807 228 55 81 chr17 5116469 5116633 -80321847 - L1M4 LINE L1 -1516 4630 4463 2461 86 0 0 chr17 5116633 5116937 -80321543 - AluSc SINE Alu -4 305 2 2539 85 0 0 chr17 5116939 5117246 -80321234 - AluSq SINE Alu -6 307 1 807 228 55 81 chr17 5117246 5117363 -80321117 - L1M4 LINE L1 -1684 4462 4354 2513 64 0 0 chr17 5117363 5117659 -80320821 - AluY SINE Alu -15 296 1 1318 181 0 0 chr17 5117668 5117873 -80320607 - AluJb SINE Alu -23 289 85 2251 92 0 7 chr17 5117886 5118192 -80320288 - AluSx SINE Alu -8 304 1 2327 232 6 40 chr17 5118192 5118722 -80319758 - L1M4 LINE L1 -5697 845 334 500 239 26 0 chr17 5118726 5118843 -80319637 + L1M4 LINE L1 581 700 -5842 1001 133 0 0 chr17 5118868 5119018 -80319462 - AluSg/x SINE Alu -1 311 162 505 17 0 0 chr17 5119018 5119078 -80319402 - AluSp/q SINE Alu -16 297 238 1832 109 7 51 chr17 5119092 5119385 -80319095 - AluSx SINE Alu -32 280 1 1975 128 14 0 chr17 5119396 5119677 -80318803 - AluSx SINE Alu -7 305 21 888 182 50 0 chr17 5119761 5119917 -80318563 - MER20 DNA MER1_type -1 218 55 407 138 0 0 chr17 5119917 5119975 -80318505 + AluS SINE Alu 1 58 -250 180 0 0 0 chr17 5119991 5120011 -80318469 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 2506 65 0 7 chr17 5120012 5120319 -80318161 + AluY SINE Alu 1 305 -6 255 241 37 19 chr17 5120407 5120515 -80317965 + L1MC4 LINE L1 7932 8041 -1 905 278 229 50 chr17 5120564 5121036 -80317444 - L2 LINE L2 -1108 2206 1820 1605 164 114 0 chr17 5121036 5121316 -80317164 - AluJb SINE Alu 0 312 1 905 278 229 50 chr17 5121316 5121373 -80317107 - L2 LINE L2 -1494 1820 1775 2103 107 14 7 chr17 5121373 5121662 -80316818 + AluSg SINE Alu 1 291 -19 905 278 229 50 chr17 5121662 5122052 -80316428 - L2 LINE L2 -1539 1775 1121 1954 100 0 0 chr17 5122116 5122367 -80316113 - AluSg SINE Alu -6 304 54 754 292 104 39 chr17 5122441 5122797 -80315683 + LTR67 LTR ERVL 101 479 -78 2648 52 0 0 chr17 5122954 5123260 -80315220 - AluY SINE Alu -5 306 1 1657 181 56 3 chr17 5123504 5123792 -80314688 - AluJb SINE Alu -9 303 1 2273 92 27 0 chr17 5124656 5124949 -80313531 - AluSx SINE Alu -11 301 1 1068 219 75 67 chr17 5125319 5125373 -80313107 + Charlie7 DNA MER1_type 284 336 -2276 2443 75 0 0 chr17 5125373 5125668 -80312812 - AluY SINE Alu -16 295 1 2251 85 0 7 chr17 5125671 5125987 -80312493 - AluSg SINE Alu 0 314 1 1068 219 75 67 chr17 5125987 5126329 -80312151 + Charlie7 DNA MER1_type 337 688 -1924 1105 76 0 0 chr17 5126589 5126720 -80311760 - AluSg SINE Alu -179 131 1 425 287 21 122 chr17 5126941 5127227 -80311253 - L2 LINE L2 -20 3252 2996 862 234 172 39 chr17 5127346 5127619 -80310861 + L1MC4a LINE L1 5905 6140 -1668 2531 62 0 0 chr17 5127619 5127927 -80310553 + AluY SINE Alu 3 310 -1 862 234 172 39 chr17 5127927 5128118 -80310362 + L1MC4a LINE L1 6140 6431 -1377 968 262 121 32 chr17 5128120 5128623 -80309857 + L1MC4 LINE L1 7353 7900 -142 206 167 0 24 chr17 5128634 5128676 -80309804 + (CATA)n Simple_repeat Simple_repeat 4 44 0 2395 91 7 0 chr17 5128884 5129191 -80309289 + AluSp SINE Alu 1 309 -4 1851 103 0 8 chr17 5129759 5130012 -80308468 - AluSg SINE Alu -15 295 45 2148 97 7 29 chr17 5130826 5131135 -80307345 + AluSq SINE Alu 1 302 -11 2185 73 4 4 chr17 5131314 5131586 -80306894 + AluSg SINE Alu 1 272 -38 243 0 0 0 chr17 5131611 5131638 -80306842 + (TG)n Simple_repeat Simple_repeat 2 28 0 1986 131 31 0 chr17 5131822 5132112 -80306368 + AluSx SINE Alu 1 299 -13 2340 222 100 39 chr17 5132168 5133020 -80305460 + L1ME3A LINE L1 5267 6170 0 25 0 0 0 chr17 5133476 5133501 -80304979 + AT_rich Low_complexity Low_complexity 1 25 0 1945 79 86 11 chr17 5133829 5134109 -80304371 - AluSx SINE Alu -11 301 1 2092 124 10 0 chr17 5135041 5135348 -80303132 + AluSg SINE Alu 1 310 0 258 298 46 14 chr17 5136172 5136318 -80302162 + MIR SINE MIR 65 212 -50 307 370 58 23 chr17 5137476 5137649 -80300831 - L2 LINE L2 -4 3268 3090 325 324 171 11 chr17 5137692 5137967 -80300513 - L2 LINE L2 -929 2385 2067 2390 61 0 0 chr17 5137985 5138280 -80300200 - AluY SINE Alu -16 295 1 1292 196 116 7 chr17 5138329 5138605 -80299875 + L1MB5 LINE L1 5868 6173 -1 2486 67 0 3 chr17 5139187 5139487 -80298993 + AluY SINE Alu 1 299 -12 1934 134 0 20 chr17 5139499 5139805 -80298675 + AluJo SINE Alu 1 300 -12 1600 168 14 3 chr17 5139872 5140158 -80298322 - AluSx SINE Alu -10 302 14 21 0 0 0 chr17 5140195 5140216 -80298264 + AT_rich Low_complexity Low_complexity 1 21 0 1224 196 42 45 chr17 5140325 5140678 -80297802 + MER74A LTR ERVL 144 495 -63 2005 129 10 0 chr17 5140732 5141026 -80297454 + AluSx SINE Alu 1 297 -15 389 251 53 37 chr17 5141039 5141226 -80297254 + L1ME4a LINE L1 5753 5942 -179 2275 88 7 10 chr17 5141227 5141521 -80296959 + AluSg SINE Alu 1 293 -17 1415 108 47 9 chr17 5141544 5141757 -80296723 + AluJb SINE Alu 85 305 -7 407 216 88 24 chr17 5141801 5141926 -80296554 + L1ME4a LINE L1 5962 6094 -27 1253 157 10 10 chr17 5142048 5142245 -80296235 - AluSg/x SINE Alu -29 283 87 405 316 37 18 chr17 5143167 5143385 -80295095 - L2 LINE L2 -497 2817 2596 1704 171 10 14 chr17 5144409 5144701 -80293779 - AluJb SINE Alu -21 291 1 831 171 0 0 chr17 5144704 5144833 -80293647 - AluJo/FLAM SINE Alu -179 133 5 190 310 120 80 chr17 5144977 5145303 -80293177 - L2 LINE L2 -114 3158 2820 355 187 60 84 chr17 5145346 5145512 -80292968 + MIR SINE MIR 92 253 -9 382 105 0 0 chr17 5145554 5145611 -80292869 - Alu SINE Alu -2 299 243 325 298 53 7 chr17 5145847 5145998 -80292482 + L1MB7 LINE L1 5633 5790 -331 1780 159 3 24 chr17 5146071 5146367 -80292113 - AluJb SINE Alu -22 290 1 28 61 0 0 chr17 5146558 5146607 -80291873 + AT_rich Low_complexity Low_complexity 1 49 0 1399 79 129 10 chr17 5146737 5146939 -80291541 + MER30 DNA MER1_type 5 230 0 2610 44 0 0 chr17 5147486 5147782 -80290698 - AluY SINE Alu -15 296 1 344 213 98 41 chr17 5148032 5148154 -80290326 + MER103 DNA DNA 36 164 -2 1769 158 21 0 chr17 5148718 5149009 -80289471 + L1MB7 LINE L1 5882 6178 -6 2341 84 7 7 chr17 5149020 5149329 -80289151 + AluY SINE Alu 1 309 -2 191 418 0 0 chr17 5149506 5149597 -80288883 + L2 LINE L2 2956 3046 -226 2282 92 3 7 chr17 5149602 5149894 -80288586 + AluSp SINE Alu 1 291 -22 2004 138 0 0 chr17 5150427 5150753 -80287727 - AluSx SINE Alu 0 326 1 29 28 0 0 chr17 5151208 5151244 -80287236 + AT_rich Low_complexity Low_complexity 1 36 0 307 339 40 23 chr17 5151344 5151521 -80286959 - L1MC/D LINE L1 -2233 5811 5632 853 183 0 0 chr17 5151679 5151816 -80286664 + FLAM_C SINE Alu 3 139 -4 235 245 75 66 chr17 5152759 5152865 -80285615 - L1M1 LINE L1 -846 5457 5351 1083 119 0 36 chr17 5152893 5153061 -80285419 - AluSg/x SINE Alu -5 307 146 2510 71 0 0 chr17 5153079 5153390 -80285090 - AluY SINE Alu 0 311 1 1758 149 67 0 chr17 5153439 5153707 -80284773 - AluSx SINE Alu -26 286 1 271 229 57 43 chr17 5153718 5153858 -80284622 - L1MC/D LINE L1 -872 5510 5369 516 154 13 0 chr17 5153959 5154037 -80284443 - AluJ/FLAM SINE Alu -232 80 2 2027 112 32 0 chr17 5154047 5154332 -80284148 - AluSx SINE Alu -18 294 1 377 263 124 84 chr17 5154341 5154703 -80283777 - L1MC/D LINE L1 -1234 5148 4802 1524 132 123 8 chr17 5154703 5154954 -80283526 - AluSg1 SINE Alu -29 280 1 377 263 124 84 chr17 5154954 5155317 -80283163 - L1MC/D LINE L1 -1580 4802 4394 348 287 120 62 chr17 5155539 5156024 -80282456 - L1MC/D LINE L1 -2328 4054 3542 807 188 48 12 chr17 5156024 5156189 -80282291 - AluJo SINE Alu -19 293 123 373 265 103 7 chr17 5156194 5156330 -80282150 - L1MC/D LINE L1 -2875 3507 3359 2477 83 0 3 chr17 5156331 5156645 -80281835 - AluSq SINE Alu 0 313 1 244 279 15 0 chr17 5156847 5156915 -80281565 - MIR SINE MIR -27 235 167 506 224 20 61 chr17 5156925 5157072 -80281408 - MIR SINE MIR -58 204 64 405 270 110 19 chr17 5157167 5157485 -80280995 - L1MC/D LINE L1 -3530 2852 2506 2257 95 0 16 chr17 5157488 5157792 -80280688 - AluSx SINE Alu -11 301 3 870 248 0 0 chr17 5157794 5157955 -80280525 - AluJb SINE Alu -23 289 129 319 274 142 20 chr17 5157966 5158139 -80280341 - L1MC/D LINE L1 -3885 2499 2296 1517 172 54 37 chr17 5158139 5158435 -80280045 - AluJo SINE Alu -11 301 1 319 274 142 20 chr17 5158435 5158465 -80280015 - L1MC/D LINE L1 -4088 2296 2271 2168 92 7 26 chr17 5158725 5159029 -80279451 - AluSp SINE Alu -14 299 2 2427 57 0 27 chr17 5159606 5159906 -80278574 - AluY SINE Alu -19 292 1 22 0 0 0 chr17 5159907 5159929 -80278551 + AT_rich Low_complexity Low_complexity 1 22 0 1834 156 16 13 chr17 5160689 5161046 -80277434 + L1MC3 LINE L1 7450 7983 -12 205 305 95 48 chr17 5161415 5161520 -80276960 - L2 LINE L2 -3 3310 3201 452 223 31 136 chr17 5161525 5161812 -80276668 - L2 LINE L2 -78 3235 2979 446 299 162 5 chr17 5162272 5162476 -80276004 - MIR SINE MIR -21 241 6 1310 151 56 119 chr17 5162642 5162779 -80275701 + AluSx SINE Alu 1 145 -167 2372 90 0 0 chr17 5162779 5163078 -80275402 + AluSx SINE Alu 2 300 -12 1310 151 56 119 chr17 5163078 5163259 -80275221 + AluSx SINE Alu 145 299 -13 281 285 103 23 chr17 5163266 5163447 -80275033 + MLT1J LTR MaLR 2 159 -287 466 300 42 29 chr17 5163463 5163705 -80274775 + MLT1J LTR MaLR 305 499 -12 2348 90 0 0 chr17 5163848 5164147 -80274333 + AluY SINE Alu 1 299 -12 2263 86 3 35 chr17 5164400 5164713 -80273767 + AluSx SINE Alu 1 303 -9 21 0 0 0 chr17 5165434 5165455 -80273025 + AT_rich Low_complexity Low_complexity 1 21 0 511 254 163 14 chr17 5165542 5165751 -80272729 + MIR SINE MIR 13 252 -10 383 266 152 15 chr17 5165938 5166255 -80272225 - L1M3 LINE L1 -748 5398 5195 243 0 0 0 chr17 5166255 5166282 -80272198 + (A)n Simple_repeat Simple_repeat 1 27 0 1836 153 3 3 chr17 5166287 5166569 -80271911 - AluJo SINE Alu -30 282 1 300 330 102 0 chr17 5166660 5166778 -80271702 + MIR3 SINE MIR 4 133 -75 329 123 15 0 chr17 5167464 5167529 -80270951 + (TA)n Simple_repeat Simple_repeat 1 66 0 382 242 80 93 chr17 5167669 5167767 -80270713 - L1MC5 LINE L1 -49 7912 7814 2305 78 3 3 chr17 5167767 5168061 -80270419 - AluSq SINE Alu -19 294 1 382 242 80 93 chr17 5168061 5168350 -80270130 - L1MC5 LINE L1 -147 7814 7530 2096 75 65 0 chr17 5168360 5168639 -80269841 - AluSg SINE Alu -13 297 1 2023 159 0 3 chr17 5168639 5168947 -80269533 - AluJb SINE Alu -4 308 1 593 252 22 0 chr17 5169761 5169896 -80268584 + Tigger3(Golem) DNA MER2_type 2 139 -2890 2404 95 0 13 chr17 5169928 5170244 -80268236 - AluSx SINE Alu 0 312 1 1355 170 33 8 chr17 5170244 5170485 -80267995 + Tigger3(Golem) DNA MER2_type 2783 3029 0 4688 179 33 7 chr17 5170496 5171352 -80267128 - L1MC1 LINE L1 0 6333 5456 469 206 37 0 chr17 5171359 5171466 -80267014 - L1MC1 LINE L1 -941 5392 5282 * 1800 179 45 73 chr17 5171461 5171952 -80266528 - L1MA4 LINE L1 -1 7718 7242 1994 104 3 83 chr17 5171952 5172278 -80266202 - AluSq SINE Alu -12 301 2 6512 154 59 126 chr17 5172278 5174185 -80264295 - L1MA4 LINE L1 -638 7085 5327 2099 138 3 3 chr17 5174185 5174497 -80263983 - AluSx SINE Alu 0 312 1 6512 154 59 126 chr17 5174497 5174673 -80263807 - L1MA4 LINE L1 -2396 5327 5141 4768 208 50 45 chr17 5174678 5174915 -80263565 - L1MA4 LINE L1 -3528 4037 3803 1364 164 56 72 chr17 5174915 5175081 -80263399 - AluJo SINE Alu -12 300 140 2211 99 0 3 chr17 5175081 5175373 -80263107 - AluSq SINE Alu -22 291 1 1364 164 56 72 chr17 5175373 5175511 -80262969 - AluJo SINE Alu -172 140 1 4768 208 50 45 chr17 5175511 5175673 -80262807 - L1MA4 LINE L1 -3762 3803 3643 1775 163 10 10 chr17 5175673 5175829 -80262651 - AluJb SINE Alu -23 289 131 1992 149 0 3 chr17 5175829 5176130 -80262350 - AluJo SINE Alu -12 300 1 1775 163 10 10 chr17 5176130 5176262 -80262218 - AluJb SINE Alu -180 132 1 4768 208 50 45 chr17 5176262 5177628 -80260852 - L1MA4 LINE L1 -3922 3643 2254 2069 106 24 10 chr17 5177628 5177920 -80260560 + AluSx SINE Alu 1 296 -16 2245 101 10 3 chr17 5177933 5178241 -80260239 - AluSg SINE Alu 0 310 1 717 151 0 0 chr17 5178246 5178365 -80260115 - L1MA6 LINE L1 -5 6295 6177 1013 260 46 26 chr17 5178365 5178753 -80259727 - L1M4 LINE L1 -2284 3862 3490 239 132 0 0 chr17 5178887 5178925 -80259555 - L1MB8 LINE L1 0 6178 6141 3653 208 55 7 chr17 5178926 5179634 -80258846 - MER21B LTR ERV1 -86 777 36 204 40 0 0 chr17 5179639 5179664 -80258816 + (TA)n Simple_repeat Simple_repeat 1 25 0 2011 204 75 29 chr17 5179664 5180213 -80258267 - L1M4 LINE L1 -1960 4186 3613 997 169 0 11 chr17 5180213 5180391 -80258089 + AluSg/x SINE Alu 128 303 -9 2231 125 0 0 chr17 5180434 5180739 -80257741 - AluSx SINE Alu -7 305 1 2135 116 7 3 chr17 5180811 5181121 -80257359 - AluSx SINE Alu -1 311 1 472 269 133 50 chr17 5181169 5181416 -80257064 - HAL1 LINE L1 -856 1651 1426 2270 111 0 7 chr17 5181416 5181722 -80256758 - AluSx SINE Alu -8 304 1 472 269 133 50 chr17 5181722 5181932 -80256548 - HAL1 LINE L1 -1081 1426 1156 2538 57 0 0 chr17 5182474 5182771 -80255709 + AluY SINE Alu 1 297 -14 1693 104 0 0 chr17 5182830 5183060 -80255420 + AluSg/x SINE Alu 80 309 -1 2019 133 0 10 chr17 5184174 5184467 -80254013 - AluSx SINE Alu -22 290 1 2026 115 3 17 chr17 5184841 5185128 -80253352 + AluSx SINE Alu 1 283 -29 1437 217 64 31 chr17 5185156 5185571 -80252909 + Charlie2 DNA MER1_type 1854 2289 -573 2118 108 10 20 chr17 5185571 5185877 -80252603 - AluSg SINE Alu -7 303 1 1437 217 64 31 chr17 5185877 5185944 -80252536 + Charlie2 DNA MER1_type 2289 2352 -510 25 0 0 0 chr17 5186300 5186325 -80252155 + AT_rich Low_complexity Low_complexity 1 25 0 680 286 29 6 chr17 5186389 5186560 -80251920 + MER5A DNA MER1_type 1 175 -14 2267 90 0 0 chr17 5186566 5186855 -80251625 + AluSx SINE Alu 9 297 -15 443 276 91 22 chr17 5186897 5187060 -80251420 + Charlie2 DNA MER1_type 2509 2694 -168 1924 82 33 59 chr17 5187060 5187366 -80251114 + AluSg SINE Alu 1 298 -12 443 276 91 22 chr17 5187366 5187434 -80251046 + Charlie2 DNA MER1_type 2694 2756 -106 529 245 245 7 chr17 5187543 5187690 -80250790 + MER5A DNA MER1_type 7 188 -1 627 211 12 62 chr17 5187703 5187864 -80250616 - MER5A DNA MER1_type -36 153 1 2191 86 3 16 chr17 5187987 5188300 -80250180 - AluSp SINE Alu -4 309 1 255 256 23 35 chr17 5188388 5188474 -80250006 + L2 LINE L2 3229 3313 0 2360 77 0 0 chr17 5189142 5189440 -80249040 + AluSx SINE Alu 1 298 -14 2066 105 3 0 chr17 5190347 5190632 -80247848 - AluSx SINE Alu -26 286 1 225 204 74 0 chr17 5190701 5190755 -80247725 + Tigger5 DNA MER2_type 1 58 -2265 * 455 112 10 71 chr17 5190740 5190838 -80247642 + Tigger5 DNA MER2_type 2040 2131 -192 2208 95 0 0 chr17 5191029 5191323 -80247157 - AluSx SINE Alu -18 294 1 1023 152 92 0 chr17 5191431 5191615 -80246865 + Tigger5 DNA MER2_type 2121 2321 -2 2023 126 3 10 chr17 5193069 5193371 -80245109 - AluSq SINE Alu -13 300 1 2232 102 0 3 chr17 5193612 5193916 -80244564 - AluSq SINE Alu -9 304 2 1665 188 0 0 chr17 5194126 5194436 -80244044 + AluSx SINE Alu 1 310 0 1038 168 16 0 chr17 5194840 5195025 -80243455 + AluJo SINE Alu 1 188 -124 22 56 0 0 chr17 5195057 5195093 -80243387 + AT_rich Low_complexity Low_complexity 1 36 0 1944 138 0 0 chr17 5195127 5195424 -80243056 + AluSx SINE Alu 1 297 -15 470 323 81 44 chr17 5195516 5195860 -80242620 - L3 LINE CR1 -371 1206 850 180 345 0 0 chr17 5195921 5195979 -80242501 - L3 LINE CR1 -957 620 563 721 330 65 57 chr17 5196235 5196622 -80241858 + LTR67 LTR ERVL 36 429 -128 806 184 107 6 chr17 5196622 5196790 -80241690 + MER5A DNA MER1_type 2 186 -3 721 330 65 57 chr17 5196790 5196911 -80241569 + LTR67 LTR ERVL 429 548 -9 1570 180 80 43 chr17 5197096 5197469 -80241011 + L1MC3 LINE L1 7153 7539 -246 2232 97 0 0 chr17 5197641 5197949 -80240531 + AluSc SINE Alu 1 308 -1 915 166 137 66 chr17 5198297 5198508 -80239972 + L1MC5 LINE L1 6683 6908 -1053 298 182 268 71 chr17 5198566 5198714 -80239766 + L1MC5 LINE L1 7603 7721 -240 2465 50 0 0 chr17 5198714 5199012 -80239468 + AluY SINE Alu 1 298 -13 298 182 268 71 chr17 5199012 5199061 -80239419 + L1MC5 LINE L1 7721 7839 -122 474 189 277 14 chr17 5199825 5199973 -80238507 + MIR SINE MIR 5 191 -71 422 284 105 12 chr17 5200010 5200172 -80238308 - MIR SINE MIR -57 205 29 419 249 11 62 chr17 5200487 5200631 -80237849 + L1ME LINE L1 5627 5762 -359 1510 182 30 13 chr17 5200631 5200933 -80237547 + AluJb SINE Alu 1 307 -5 419 249 11 62 chr17 5200933 5200965 -80237515 + L1ME LINE L1 5762 5794 -327 454 300 65 39 chr17 5200991 5201108 -80237372 + L1ME LINE L1 3543 3655 -2491 2085 112 10 0 chr17 5201108 5201404 -80237076 + AluSp SINE Alu 1 299 -14 454 300 65 39 chr17 5201404 5201593 -80236887 + L1ME LINE L1 3655 3857 -2289 329 265 82 18 chr17 5201642 5201812 -80236668 + HAL1b LINE L1 76 256 -1092 239 248 114 78 chr17 5202039 5202265 -80236215 + L1ME LINE L1 5585 5826 -295 2014 115 0 23 chr17 5202265 5202569 -80235911 - AluSx SINE Alu -15 297 1 239 248 114 78 chr17 5202569 5202649 -80235831 + L1ME LINE L1 5826 5902 -219 999 143 0 0 chr17 5202792 5202953 -80235527 + MER2 DNA MER2_type 51 211 -134 1597 124 54 0 chr17 5202960 5203219 -80235261 - AluSg SINE Alu -1 309 37 355 234 0 0 chr17 5203223 5203287 -80235193 + MER2 DNA MER2_type 282 345 0 22 56 0 0 chr17 5203369 5203405 -80235075 + AT_rich Low_complexity Low_complexity 1 36 0 1382 171 89 0 chr17 5203664 5203933 -80234547 + AluJb SINE Alu 1 293 -19 1985 117 10 24 chr17 5204065 5204363 -80234117 - AluSp SINE Alu -19 294 1 1408 194 20 17 chr17 5204394 5204687 -80233793 + AluJb SINE Alu 6 299 -13 1895 139 17 0 chr17 5204687 5204989 -80233491 + AluSx SINE Alu 1 307 -5 23 0 0 0 chr17 5205044 5205067 -80233413 + AT_rich Low_complexity Low_complexity 1 23 0 270 296 145 48 chr17 5205111 5205462 -80233018 + L1ME4a LINE L1 5412 5822 -299 1750 138 18 7 chr17 5205462 5205745 -80232735 - AluSx SINE Alu -26 286 1 270 296 145 48 chr17 5205745 5205870 -80232610 + L1ME4a LINE L1 5822 5934 -187 25 51 0 0 chr17 5205884 5205923 -80232557 + AT_rich Low_complexity Low_complexity 1 39 0 1959 122 0 10 chr17 5205947 5206241 -80232239 - AluSg SINE Alu -18 292 2 1338 200 3 10 chr17 5206486 5206776 -80231704 + AluSx SINE Alu 11 298 -14 2389 54 0 3 chr17 5206983 5207279 -80231201 + AluY SINE Alu 1 295 -16 552 210 22 29 chr17 5207654 5207792 -80230688 + LTR41 LTR ERVL 594 730 -43 310 247 134 16 chr17 5207936 5208152 -80230328 + L1P LINE L1 5118 5358 -788 194 91 30 0 chr17 5208176 5208209 -80230271 + GA-rich Low_complexity Low_complexity 3 36 0 196 148 0 37 chr17 5208234 5208288 -80230192 + (GAAA)n Simple_repeat Simple_repeat 2 53 0 1888 143 0 7 chr17 5208367 5208674 -80229806 + AluSx SINE Alu 3 307 -5 2097 125 3 0 chr17 5208676 5208987 -80229493 + AluSx SINE Alu 1 312 0 201 316 0 0 chr17 5208991 5209048 -80229432 + L2 LINE L2 2718 2774 -540 196 311 33 0 chr17 5209143 5209204 -80229276 + L2 LINE L2 2995 3057 -215 1501 250 54 44 chr17 5209236 5209449 -80229031 + L2 LINE L2 2410 2619 -694 1751 144 28 11 chr17 5209449 5209733 -80228747 - AluJb SINE Alu -20 292 4 1501 250 54 44 chr17 5209733 5209747 -80228733 + L2 LINE L2 2619 2631 -682 2218 95 0 0 chr17 5209747 5210041 -80228439 - AluSx SINE Alu -5 307 14 1501 250 54 44 chr17 5210041 5210703 -80227777 + L2 LINE L2 2631 3309 -4 386 270 30 20 chr17 5210759 5210859 -80227621 + L2 LINE L2 3170 3270 -2 2176 97 0 0 chr17 5210867 5211157 -80227323 - AluSg SINE Alu -20 290 1 308 302 81 53 chr17 5211184 5211550 -80226930 + L1MC/D LINE L1 5466 5849 -321 592 274 47 16 chr17 5211573 5211763 -80226717 + MIR SINE MIR 37 232 -30 793 155 31 0 chr17 5211939 5212068 -80226412 + FLAM_C SINE Alu 1 133 0 22 0 0 0 chr17 5212377 5212399 -80226081 + AT_rich Low_complexity Low_complexity 1 22 0 1753 157 3 3 chr17 5212605 5212904 -80225576 + AluJb SINE Alu 1 299 -13 180 296 170 59 chr17 5214215 5214350 -80224130 - MIR3 SINE MIR -57 151 2 21 114 0 0 chr17 5214672 5214777 -80223703 + GC_rich Low_complexity Low_complexity 1 105 0 249 53 0 211 chr17 5215136 5215277 -80223203 + (GGGA)n Simple_repeat Simple_repeat 1 111 0 305 249 96 47 chr17 5215397 5215546 -80222934 + MIR3 SINE MIR 1 156 -65 201 238 313 0 chr17 5215632 5215712 -80222768 - L2 LINE L2 -4 3309 3205 2313 78 0 0 chr17 5215858 5216154 -80222326 - AluSg SINE Alu -14 296 1 250 278 0 0 chr17 5216254 5216308 -80222172 + MER115 DNA AcHobo 156 209 -484 2906 37 3 0 chr17 5216389 5216746 -80221734 + L1PA8 LINE L1 5817 6455 -14 2052 86 14 4 chr17 5216746 5217025 -80221455 + AluSg1 SINE Alu 1 282 -27 2906 37 3 0 chr17 5217025 5217041 -80221439 + L1PA8 LINE L1 6455 6469 0 1001 241 86 80 chr17 5217139 5217445 -80221035 + MER115 DNA AcHobo 304 614 -79 1989 125 3 13 chr17 5217445 5217756 -80220724 - AluSx SINE Alu 0 312 5 1001 241 86 80 chr17 5217756 5217835 -80220645 + MER115 DNA AcHobo 614 691 -2 1877 102 58 10 chr17 5218069 5218364 -80220116 + AluSx SINE Alu 1 309 -3 265 206 55 53 chr17 5218568 5218662 -80219818 + L1ME LINE L1 5606 5698 -423 275 272 87 0 chr17 5218736 5218828 -80219652 + L1ME LINE L1 5669 5768 -402 1164 90 0 0 chr17 5218850 5219005 -80219475 + AluY SINE Alu 139 293 -18 256 146 0 0 chr17 5219012 5219053 -80219427 + L1ME LINE L1 5788 5828 -342 2179 78 7 0 chr17 5219053 5219347 -80219133 + AluY SINE Alu 1 296 -15 560 306 151 39 chr17 5219369 5219860 -80218620 + L3 LINE CR1 967 1512 -65 2020 125 0 13 chr17 5219938 5220243 -80218237 + AluSx SINE Alu 1 301 -11 1224 125 0 0 chr17 5220900 5221076 -80217404 - AluSg/x SINE Alu -5 307 132 280 252 49 119 chr17 5221127 5221173 -80217307 + MIR SINE MIR 20 68 -194 2135 91 0 27 chr17 5221173 5221297 -80217183 + AluSx SINE Alu 11 137 -175 2144 87 0 14 chr17 5221297 5221613 -80216867 + AluY SINE Alu 1 312 0 2135 91 0 27 chr17 5221613 5221785 -80216695 + AluSx SINE Alu 137 300 -12 280 252 49 119 chr17 5221785 5221881 -80216599 + MIR SINE MIR 68 152 -110 2117 108 17 0 chr17 5222220 5222516 -80215964 - AluSx SINE Alu -11 301 1 198 0 0 0 chr17 5222539 5222561 -80215919 + (TTTTA)n Simple_repeat Simple_repeat 2 23 0 2042 109 0 0 chr17 5222563 5222847 -80215633 - AluSx SINE Alu -28 284 1 386 224 66 3 chr17 5223949 5224088 -80214392 + MIR SINE MIR 45 191 -70 2282 57 0 0 chr17 5224229 5224511 -80213969 - AluSq SINE Alu -7 306 25 2129 112 0 0 chr17 5224853 5225149 -80213331 + AluSc SINE Alu 1 296 -13 1959 127 3 7 chr17 5225517 5225817 -80212663 + AluSx SINE Alu 6 304 -8 254 256 70 0 chr17 5226083 5226169 -80212311 + (CACTG)n Simple_repeat Simple_repeat 4 95 0 2167 198 24 67 chr17 5226402 5226450 -80212030 - LTR31 LTR ERV1 -17 602 553 2449 40 3 7 chr17 5226450 5226750 -80211730 - AluY SINE Alu -12 299 1 2167 198 24 67 chr17 5226750 5227136 -80211344 - LTR31 LTR ERV1 -66 553 194 2198 100 10 10 chr17 5227136 5227445 -80211035 - AluSq SINE Alu -4 309 1 2167 198 24 67 chr17 5227445 5227560 -80210920 - LTR31 LTR ERV1 -425 194 76 1609 161 39 7 chr17 5227568 5227727 -80210753 - AluJo SINE Alu -16 296 123 270 0 0 0 chr17 5227727 5227757 -80210723 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 1609 161 39 7 chr17 5227757 5227882 -80210598 - AluJo SINE Alu -189 123 3 615 163 10 0 chr17 5228397 5228495 -80209985 + AluJ/FLAM SINE Alu 2 100 -212 674 173 17 12 chr17 5228533 5228706 -80209774 + GA-rich Low_complexity Low_complexity 5 178 0 2321 90 0 7 chr17 5228828 5229138 -80209342 + AluSx SINE Alu 2 309 -3 466 315 55 0 chr17 5229645 5229791 -80208689 - L2 LINE L2 -1 3312 3159 1701 179 0 3 chr17 5229860 5230156 -80208324 - AluJo SINE Alu -13 299 5 945 186 0 0 chr17 5230162 5230323 -80208157 - AluJb SINE Alu -16 296 136 2129 87 7 13 chr17 5230325 5230624 -80207856 - AluSg SINE Alu -9 301 5 805 93 0 0 chr17 5231009 5231116 -80207364 + AluSq/x SINE Alu 5 111 -202 948 208 16 0 chr17 5231134 5231195 -80207285 - AluJo SINE Alu -126 186 127 365 0 22 0 chr17 5231195 5231240 -80207240 + (TG)n Simple_repeat Simple_repeat 2 47 0 948 208 16 0 chr17 5231240 5231361 -80207119 - AluJo SINE Alu -185 127 1 2352 87 3 0 chr17 5231711 5232022 -80206458 + AluSx SINE Alu 1 312 0 2025 128 3 0 chr17 5232079 5232377 -80206103 - AluSx SINE Alu -13 299 1 786 262 50 57 chr17 5232649 5232931 -80205549 - MLT2F LTR ERVL -367 296 17 1221 192 28 0 chr17 5233034 5233289 -80205191 + L1MD3 LINE L1 7734 7995 0 927 85 4 2 chr17 5233473 5233730 -80204750 + AluSq SINE Alu 1 313 0 2173 105 0 13 chr17 5234459 5234772 -80203708 + AluSx SINE Alu 1 309 -3 182 342 0 51 chr17 5235545 5235624 -80202856 + L3b LINE CR1 1433 1507 -76 261 0 0 0 chr17 5235847 5235876 -80202604 + (TC)n Simple_repeat Simple_repeat 1 29 0 * 369 62 0 0 chr17 5235875 5235923 -80202557 + (CA)n Simple_repeat Simple_repeat 1 48 0 385 323 37 25 chr17 5235932 5236093 -80202387 + MIR SINE MIR 97 259 -3 297 256 136 48 chr17 5236141 5236266 -80202214 - MIR SINE MIR -74 188 53 217 167 0 30 chr17 5236973 5237039 -80201441 + GA-rich Low_complexity Low_complexity 2 65 0 263 226 17 52 chr17 5237048 5237163 -80201317 + (CAGAGA)n Simple_repeat Simple_repeat 6 116 0 531 273 14 7 chr17 5237245 5237384 -80201096 - MIR SINE MIR 0 262 123 748 258 220 18 chr17 5237590 5237931 -80200549 + L2 LINE L2 2904 3313 0 1174 301 46 26 chr17 5238204 5238619 -80199861 + LTR16A LTR ERVL 21 443 -7 577 303 12 47 chr17 5238645 5238899 -80199581 - L3 LINE CR1 -163 1414 1170 315 267 48 38 chr17 5240093 5240198 -80198282 - L2 LINE L2 -12 3260 3155 475 266 57 0 chr17 5240365 5240489 -80197991 + Charlie8 DNA MER1_type 92 222 -2195 304 309 0 94 chr17 5240582 5240731 -80197749 - L2 LINE L2 -238 3034 2900 2156 114 3 7 chr17 5240852 5241160 -80197320 + AluSx SINE Alu 5 311 -1 2098 220 50 45 chr17 5241284 5241820 -80196660 - MLT1G1 LTR MaLR -5 590 52 1496 178 23 33 chr17 5241823 5242311 -80196169 + AluJo SINE Alu 1 485 0 1128 71 0 33 chr17 5242127 5242355 -80196125 + (GAAA)n Simple_repeat Simple_repeat 3 224 0 1166 290 6 9 chr17 5242381 5242702 -80195778 - L2 LINE L2 -1018 2296 1977 195 296 26 70 chr17 5242716 5242831 -80195649 - L2 LINE L2 -563 2751 2642 2188 88 0 0 chr17 5243308 5243602 -80194878 + AluY SINE Alu 1 294 -17 214 239 226 9 chr17 5244280 5244437 -80194043 + MIR SINE MIR 35 262 0 808 236 106 22 chr17 5244676 5245123 -80193357 - LTR33A LTR ERVL 0 523 2 503 301 162 27 chr17 5245644 5246009 -80192471 + L2 LINE L2 2900 3313 0 222 265 0 0 chr17 5246009 5246077 -80192403 + (TAGA)n Simple_repeat Simple_repeat 2 69 0 230 336 35 0 chr17 5246091 5246204 -80192276 + (TGGA)n Simple_repeat Simple_repeat 1 117 0 299 227 10 0 chr17 5246211 5246308 -80192172 + (TGGG)n Simple_repeat Simple_repeat 2 99 0 1306 224 33 15 chr17 5246736 5247066 -80191414 + MLT2C1 LTR ERVL 1 336 -61 374 119 0 15 chr17 5247070 5247137 -80191343 + (CATATA)n Simple_repeat Simple_repeat 6 71 0 234 277 67 118 chr17 5247763 5247958 -80190522 - L2 LINE L2 -93 3179 2995 665 316 14 19 chr17 5247985 5248194 -80190286 - MIR SINE MIR -18 244 37 1723 175 3 0 chr17 5248223 5248508 -80189972 - AluJb SINE Alu -26 286 1 22 35 0 0 chr17 5248733 5248762 -80189718 + AT_rich Low_complexity Low_complexity 1 29 0 547 190 28 28 chr17 5248854 5248996 -80189484 + MER96B DNA MER1_type? 192 333 -84 418 330 19 39 chr17 5249074 5249280 -80189200 - L2 LINE L2 -433 2881 2680 2175 122 39 28 chr17 5249451 5249813 -80188667 + THE1C LTR MaLR 8 373 -2 2332 163 18 50 chr17 5250220 5250722 -80187758 + L1ME2 LINE L1 5677 6162 -2 1016 156 28 69 chr17 5250835 5251053 -80187427 + MER3 DNA MER1_type 1 209 0 263 369 63 0 chr17 5251268 5251379 -80187101 - HAL1 LINE L1 -1635 872 755 492 309 114 61 chr17 5251511 5251951 -80186529 - HAL1 LINE L1 -2044 463 1 369 290 30 38 chr17 5253584 5253715 -80184765 - MLT1J LTR MaLR -152 359 230 2200 98 0 0 chr17 5253715 5254012 -80184468 + AluY SINE Alu 1 297 -14 467 235 115 68 chr17 5254039 5254273 -80184207 - MLT1J LTR MaLR -257 254 10 213 389 0 8 chr17 5255901 5256027 -80182453 + (CA)n Simple_repeat Simple_repeat 1 125 0 2120 103 0 3 chr17 5256286 5256578 -80181902 + AluSx SINE Alu 1 291 -21 2065 166 133 33 chr17 5256622 5257080 -80181400 - MLT1D LTR MaLR -1 504 1 2086 111 13 0 chr17 5257195 5257502 -80180978 - AluSx SINE Alu -1 311 1 763 244 29 6 chr17 5257509 5257681 -80180799 + MIR SINE MIR 48 223 -39 251 273 55 9 chr17 5258036 5258146 -80180334 - MLT1G1-int LTR MaLR -1618 117 3 360 204 48 39 chr17 5258148 5258251 -80180229 - MLT1G1 LTR MaLR 0 549 446 461 274 0 0 chr17 5258384 5258486 -80179994 + MIR SINE MIR 45 146 -62 1874 125 36 0 chr17 5258488 5258769 -80179711 + AluJo SINE Alu 2 292 -20 736 262 4 42 chr17 5259148 5259385 -80179095 - MLT2F LTR ERVL 0 663 436 2905 195 84 14 chr17 5259399 5259494 -80178986 - MER63C DNA MER1_type -143 917 830 1748 134 42 18 chr17 5259494 5259778 -80178702 + AluSx SINE Alu 1 291 -21 2905 195 84 14 chr17 5259778 5260303 -80178177 - MER63C DNA MER1_type -230 830 254 1417 263 36 39 chr17 5260344 5260755 -80177725 - MLT2F LTR ERVL -237 426 17 254 193 0 53 chr17 5260838 5260895 -80177585 - MLT2F LTR ERVL -593 70 17 1264 249 75 48 chr17 5262598 5262980 -80175500 - MLT1G1 LTR MaLR -210 341 1 1882 156 10 0 chr17 5263251 5263546 -80174934 + AluSx SINE Alu 1 298 -14 1266 213 39 110 chr17 5263671 5264163 -80174317 - MLT2B1 LTR ERVL -62 458 2 275 277 116 18 chr17 5264421 5264533 -80173947 - L2 LINE L2 -18 3254 3132 2167 105 3 10 chr17 5264913 5265333 -80173147 - AluSx SINE Alu 0 418 1 565 272 52 28 chr17 5265400 5265578 -80172902 - MIR SINE MIR -33 229 44 2002 146 26 19 chr17 5265578 5265955 -80172525 - L1MA4 LINE L1 -6 6294 5915 565 272 52 28 chr17 5265955 5265989 -80172491 - MIR SINE MIR -218 44 12 791 142 80 40 chr17 5266469 5266645 -80171835 + MER96B DNA MER1_type? 1 183 -234 195 42 0 0 chr17 5266785 5266809 -80171671 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 2145 103 0 3 chr17 5266845 5267147 -80171333 - AluSg SINE Alu -9 301 1 29 28 0 0 chr17 5267237 5267273 -80171207 + AT_rich Low_complexity Low_complexity 1 36 0 1570 295 108 49 chr17 5267313 5267509 -80170971 - L1M4c LINE L1 -2005 4377 4194 2486 24 3 3 chr17 5267509 5267803 -80170677 - AluY SINE Alu -17 294 1 1570 295 108 49 chr17 5267803 5268298 -80170182 - L1M4c LINE L1 -2188 4194 3729 2245 109 0 3 chr17 5268298 5268609 -80169871 - AluSx SINE Alu -2 310 1 1570 295 108 49 chr17 5268609 5269562 -80168918 - L1M4c LINE L1 -2653 3729 2636 306 257 197 52 chr17 5269654 5269801 -80168679 - L1M4c LINE L1 -4019 2544 2420 2407 76 0 0 chr17 5269801 5270105 -80168375 - AluSg SINE Alu -6 304 1 306 257 197 52 chr17 5270105 5270206 -80168274 - L1M4c LINE L1 -4143 2420 2260 21 95 0 0 chr17 5270255 5270318 -80168162 + AT_rich Low_complexity Low_complexity 1 63 0 258 258 40 115 chr17 5270545 5270734 -80167746 - L1M4c LINE L1 -738 2005 1803 189 0 0 0 chr17 5270734 5270755 -80167725 + (TTAA)n Simple_repeat Simple_repeat 2 22 0 1560 184 7 0 chr17 5270758 5271046 -80167434 - AluJb SINE Alu -22 290 1 258 258 40 115 chr17 5271046 5271189 -80167291 - L1M4c LINE L1 -942 1801 1551 204 40 0 0 chr17 5271492 5271517 -80166963 + (TCCCC)n Simple_repeat Simple_repeat 3 27 0 1980 113 29 26 chr17 5271517 5271827 -80166653 - AluSx SINE Alu -1 311 1 254 291 47 12 chr17 5271908 5271994 -80166486 - MIR SINE MIR -48 214 126 479 284 41 50 chr17 5272254 5272472 -80166008 + L3b LINE CR1 1273 1488 -95 1564 169 7 36 chr17 5272819 5273120 -80165360 - AluJb SINE Alu -20 292 1 2249 82 0 0 chr17 5273181 5273475 -80165005 - AluSc SINE Alu -15 294 1 327 347 0 40 chr17 5273612 5273736 -80164744 + L2 LINE L2 3154 3272 0 279 282 59 0 chr17 5274150 5274235 -80164245 + L2 LINE L2 3204 3293 -20 215 335 52 31 chr17 5274984 5275175 -80163305 + L2 LINE L2 2563 2757 -557 541 336 92 36 chr17 5275217 5275628 -80162852 + L2 LINE L2 2831 3264 -8 924 250 113 76 chr17 5275818 5276306 -80162174 + LTR33A LTR ERVL 10 515 -8 2361 91 0 0 chr17 5277192 5277500 -80160980 - AluSg SINE Alu -2 308 1 351 273 89 99 chr17 5277608 5278022 -80160458 - L2 LINE L2 -18 3254 2845 411 266 75 44 chr17 5279490 5279681 -80158799 - MIR SINE MIR -67 141 3 21 0 0 0 chr17 5279811 5279832 -80158648 + AT_rich Low_complexity Low_complexity 1 21 0 808 245 135 5 chr17 5279959 5280167 -80158313 + MIR SINE MIR 28 262 0 230 266 43 21 chr17 5280284 5280378 -80158102 - L1ME LINE L1 -349 5817 5722 2255 87 3 7 chr17 5280702 5281011 -80157469 + AluSg SINE Alu 1 308 -2 592 205 111 8 chr17 5281107 5281224 -80157256 - MIR SINE MIR -71 191 63 228 35 0 0 chr17 5281633 5281662 -80156818 + (CAAAAA)n Simple_repeat Simple_repeat 3 31 0 251 239 43 123 chr17 5281995 5282158 -80156322 + L2 LINE L2 2935 3084 -188 339 355 8 0 chr17 5282439 5282560 -80155920 + L3 LINE CR1 695 816 -761 318 233 35 35 chr17 5282740 5282826 -80155654 + L2 LINE L2 3228 3313 0 1913 96 46 7 chr17 5282878 5283160 -80155320 - AluSq SINE Alu -20 293 1 264 324 185 0 chr17 5283347 5283455 -80155025 + L2 LINE L2 3143 3270 -2 2052 105 0 0 chr17 5283623 5283899 -80154581 - AluSx SINE Alu -36 276 1 483 345 66 12 chr17 5284728 5284986 -80153494 - MLT1L LTR MaLR -5 610 339 337 279 36 18 chr17 5285012 5285123 -80153357 - MLT1L LTR MaLR -322 293 181 240 186 0 0 chr17 5285173 5285216 -80153264 - MLT1L LTR MaLR -431 184 142 2106 124 3 0 chr17 5285271 5285577 -80152903 - AluSx SINE Alu -5 307 1 601 209 51 19 chr17 5285577 5285735 -80152745 - MLT1H LTR MaLR -4 545 383 1785 160 3 22 chr17 5285972 5286285 -80152195 + AluJb SINE Alu 1 307 -5 303 252 66 18 chr17 5286604 5286729 -80151751 - MIR SINE MIR -47 161 33 189 250 75 25 chr17 5286886 5286966 -80151514 + L2 LINE L2 3191 3274 -39 406 368 16 11 chr17 5287015 5287205 -80151275 - MIR SINE MIR -70 192 2 2437 90 3 0 chr17 5287350 5287651 -80150829 - AluSp SINE Alu -11 302 1 430 248 58 82 chr17 5287656 5287700 -80150780 - MIR SINE MIR -49 213 169 1776 181 0 10 chr17 5287700 5287999 -80150481 + AluJo SINE Alu 1 296 -16 430 248 58 82 chr17 5287999 5288160 -80150320 - MIR SINE MIR -93 169 13 735 240 18 98 chr17 5289348 5289623 -80148857 - MIR SINE MIR -2 260 8 334 343 45 0 chr17 5289955 5290089 -80148391 + MIR3 SINE MIR 48 187 -21 1917 204 24 13 chr17 5290463 5290925 -80147555 + L1M4 LINE L1 4817 5283 -863 2006 113 23 30 chr17 5290928 5291249 -80147231 + AluSx SINE Alu 2 312 0 1015 193 0 0 chr17 5291251 5291422 -80147058 + AluSg/x SINE Alu 136 306 -6 570 160 40 8 chr17 5291422 5291547 -80146933 + L1MB8 LINE L1 6049 6177 -1 655 204 119 6 chr17 5291547 5291723 -80146757 + MIR SINE MIR 19 214 -48 239 283 33 0 chr17 5291755 5291815 -80146665 + L2 LINE L2 3157 3218 -54 2191 116 0 3 chr17 5291852 5292154 -80146326 + AluSx SINE Alu 1 301 -11 1855 150 56 3 chr17 5292168 5292454 -80146026 + AluSx SINE Alu 1 301 -11 37 81 0 0 chr17 5292466 5292552 -80145928 + AT_rich Low_complexity Low_complexity 1 86 0 291 261 33 11 chr17 5292878 5292970 -80145510 + HAL1 LINE L1 324 417 -2090 264 304 24 60 chr17 5292994 5293162 -80145318 + HAL1 LINE L1 1803 1964 -543 540 211 8 23 chr17 5293297 5293425 -80145055 + FLAM_A SINE Alu 1 126 -7 230 293 78 62 chr17 5293490 5293746 -80144734 + HAL1 LINE L1 2248 2507 0 1785 190 3 7 chr17 5293749 5294059 -80144421 + AluJo SINE Alu 1 309 -3 1864 152 24 7 chr17 5294272 5294562 -80143918 - AluJo SINE Alu -17 295 1 914 145 7 22 chr17 5294641 5294779 -80143701 - AluJo SINE Alu -176 136 1 239 219 67 92 chr17 5294781 5294848 -80143632 - MER112 DNA MER1_type -144 116 52 2439 80 0 3 chr17 5294848 5295147 -80143333 - AluY SINE Alu -13 298 1 239 219 67 92 chr17 5295147 5295198 -80143282 - MER112 DNA MER1_type -208 52 1 2452 92 0 0 chr17 5295334 5295640 -80142840 - AluSx SINE Alu -6 306 1 27 62 0 0 chr17 5297549 5297597 -80140883 + GC_rich Low_complexity Low_complexity 1 48 0 274 236 33 93 chr17 5298222 5298404 -80140076 - L1ME4a LINE L1 -16 6105 5935 296 143 32 0 chr17 5299018 5299081 -80139399 + L1M4 LINE L1 5498 5562 -612 2156 117 3 7 chr17 5299085 5299384 -80139096 - AluSx SINE Alu -14 298 1 262 233 11 79 chr17 5299746 5299935 -80138545 + (GAATG)n Simple_repeat Simple_repeat 2 177 0 189 0 0 0 chr17 5300931 5300952 -80137528 + (CAG)n Simple_repeat Simple_repeat 2 22 0 406 313 33 7 chr17 5300952 5301102 -80137378 - MIR SINE MIR -12 250 97 2324 104 0 0 chr17 5301131 5301420 -80137060 + AluSx SINE Alu 1 289 -23 294 29 0 0 chr17 5301421 5301456 -80137024 + (AATAG)n Simple_repeat Simple_repeat 4 38 0 189 0 0 0 chr17 5301716 5301737 -80136743 + (TGG)n Simple_repeat Simple_repeat 1 21 0 2128 257 94 34 chr17 5301828 5302467 -80136013 - MER45C DNA AcHobo -275 678 2 2228 117 3 0 chr17 5302796 5303095 -80135385 + AluSq SINE Alu 1 300 -13 2808 162 32 13 chr17 5303190 5303403 -80135077 + L1MB3 LINE L1 5618 5825 -358 2388 88 0 31 chr17 5303403 5303721 -80134759 + AluSq SINE Alu 1 308 -5 2808 162 32 13 chr17 5303721 5304062 -80134418 + L1MB3 LINE L1 5825 6183 0 257 0 30 0 chr17 5304104 5304137 -80134343 + (TTAAA)n Simple_repeat Simple_repeat 2 35 0 2023 140 0 40 chr17 5304206 5304341 -80134139 + AluSx SINE Alu 1 140 -172 2131 104 17 24 chr17 5304341 5304638 -80133842 + AluY SINE Alu 1 295 -16 2416 85 0 0 chr17 5304647 5304942 -80133538 + AluSg SINE Alu 1 295 -15 2023 140 0 40 chr17 5304942 5305117 -80133363 + AluSx SINE Alu 148 308 -4 711 192 8 0 chr17 5305117 5305242 -80133238 - FLAM_C SINE Alu -6 127 2 436 320 78 24 chr17 5305246 5305577 -80132903 + L1ME4a LINE L1 5567 5915 -206 470 143 0 0 chr17 5306371 5306441 -80132039 - AluSq SINE Alu -23 290 221 1059 136 0 19 chr17 5306444 5306598 -80131882 - AluSq SINE Alu -161 151 1 712 153 0 24 chr17 5306855 5306979 -80131501 - FLAM_C SINE Alu -1 142 22 1340 129 35 139 chr17 5306994 5307160 -80131320 - AluJo SINE Alu -17 295 174 2109 120 3 27 chr17 5307160 5307460 -80131020 - AluSx SINE Alu -19 293 1 1340 129 35 139 chr17 5307460 5307603 -80130877 - AluJo SINE Alu -138 174 18 211 310 110 20 chr17 5307609 5307709 -80130771 + L2 LINE L2 3173 3281 -32 * 222 293 158 56 chr17 5307707 5307922 -80130558 - MIR SINE MIR -6 256 20 2434 62 0 32 chr17 5307942 5308250 -80130230 + AluSx SINE Alu 1 298 -14 489 220 23 12 chr17 5308514 5308687 -80129793 + CT-rich Low_complexity Low_complexity 4 178 0 966 188 6 0 chr17 5309406 5309582 -80128898 + MER45A DNA AcHobo 1 177 -1 777 143 40 0 chr17 5309595 5309721 -80128759 - MER41B LTR ERV1 -375 260 130 443 139 60 114 chr17 5309840 5310006 -80128474 + MER41B-int LTR ERV1 5923 6079 -252 698 195 31 0 chr17 5310056 5310184 -80128296 - FLAM_C SINE Alu 0 133 2 809 238 78 4 chr17 5310289 5310533 -80127947 + MER41B-int LTR ERV1 6412 6673 -3 2329 151 24 10 chr17 5310533 5310943 -80127537 + MER41B LTR ERV1 111 526 -109 26 74 0 0 chr17 5310943 5310997 -80127483 + AT_rich Low_complexity Low_complexity 1 54 0 403 115 16 0 chr17 5311002 5311063 -80127417 - U7 snRNA snRNA 0 63 2 316 211 8 40 chr17 5311063 5311185 -80127295 + MER41A LTR ERV1 395 466 -12 401 195 35 0 chr17 5312439 5312526 -80125954 - MIR3 SINE MIR -6 202 113 197 273 196 42 chr17 5312568 5312711 -80125769 - L3 LINE CR1 -70 1507 1343 569 344 129 35 chr17 5312762 5313353 -80125127 + L3 LINE CR1 733 1378 -199 521 232 73 40 chr17 5313393 5313544 -80124936 - MIR SINE MIR -60 202 47 2082 126 7 0 chr17 5314184 5314477 -80124003 - AluY SINE Alu -15 296 2 875 281 87 99 chr17 5314957 5315361 -80123119 + L2 LINE L2 2234 2642 -671 1095 195 172 19 chr17 5315361 5315622 -80122858 - AluJo SINE Alu -1 301 1 2018 128 0 39 chr17 5315631 5315798 -80122682 - AluSx SINE Alu -12 300 149 2481 78 0 0 chr17 5315798 5316094 -80122386 - AluY SINE Alu -15 296 1 2018 128 0 39 chr17 5316094 5316238 -80122242 - AluSx SINE Alu -163 149 1 2215 109 0 7 chr17 5316238 5316540 -80121940 - AluSq SINE Alu -13 300 1 875 281 87 99 chr17 5316540 5316641 -80121839 + L2 LINE L2 2649 2750 -563 2494 91 3 0 chr17 5316641 5316948 -80121532 - AluSx SINE Alu -4 308 1 875 281 87 99 chr17 5316948 5317197 -80121283 + L2 LINE L2 2750 2990 -323 994 210 23 14 chr17 5317197 5317416 -80121064 + MER90 LTR ERV1 392 612 -2 2536 84 0 0 chr17 5318609 5318917 -80119563 - AluSq SINE Alu -5 308 1 2097 146 16 14 chr17 5319013 5319377 -80119103 + MLT1A1 LTR MaLR 1 365 0 1094 198 0 0 chr17 5319931 5320108 -80118372 + FRAM SINE Alu 1 176 0 367 158 13 13 chr17 5320297 5320373 -80118107 + LTR67 LTR ERVL 460 535 -22 1790 117 44 0 chr17 5320718 5320966 -80117514 - AluSx SINE Alu -14 298 40 305 267 69 0 chr17 5321452 5321553 -80116927 - MIR SINE MIR -72 136 29 316 247 0 14 chr17 5321634 5321707 -80116773 + MER81 DNA DNA 1 72 -42 360 335 95 13 chr17 5321988 5322146 -80116334 - L2 LINE L2 0 3272 3102 540 303 160 0 chr17 5322433 5322627 -80115853 + MIR SINE MIR 1 220 -42 2087 137 3 10 chr17 5322772 5323072 -80115408 - AluJb SINE Alu -14 298 1 787 221 35 0 chr17 5323439 5323611 -80114869 + MER45A DNA AcHobo 1 178 0 1534 98 31 9 chr17 5323943 5324168 -80114312 + MER30 DNA MER1_type 1 230 0 292 331 25 43 chr17 5324341 5324504 -80113976 + MIR SINE MIR 103 262 0 463 304 39 68 chr17 5325872 5326158 -80112322 - L1MEc LINE L1 -4923 1387 1109 2443 72 7 0 chr17 5326158 5326463 -80112017 - AluY SINE Alu -4 307 1 463 304 39 68 chr17 5326463 5326485 -80111995 - L1MEc LINE L1 -5201 1109 1088 402 295 65 11 chr17 5326488 5326749 -80111731 - L1MEc LINE L1 -5193 926 652 550 286 80 24 chr17 5326809 5327022 -80111458 + LTR33 LTR ERVL 297 521 0 206 261 43 14 chr17 5327526 5327595 -80110885 - L2 LINE L2 -3 3269 3199 * 631 310 47 5 chr17 5327589 5327802 -80110678 + MIR SINE MIR 5 226 -36 588 12 0 36 chr17 5327938 5328022 -80110458 + (TCTA)n Simple_repeat Simple_repeat 4 84 0 1813 179 0 11 chr17 5328023 5328308 -80110172 - AluJb SINE Alu -30 282 1 263 263 92 0 chr17 5328554 5328630 -80109850 + L2 LINE L2 3153 3235 -37 874 229 51 85 chr17 5328642 5328750 -80109730 + L1MC5 LINE L1 7485 7595 -400 1960 136 0 14 chr17 5328750 5329037 -80109443 + AluSx SINE Alu 1 283 -29 225 65 0 0 chr17 5329037 5329068 -80109412 + (CAAAC)n Simple_repeat Simple_repeat 2 32 0 874 229 51 85 chr17 5329068 5329428 -80109052 + L1MC5 LINE L1 7593 7990 -5 1311 198 55 26 chr17 5330071 5330344 -80108136 + AluJb SINE Alu 1 281 -31 189 0 0 0 chr17 5330344 5330365 -80108115 + (T)n Simple_repeat Simple_repeat 1 21 0 2016 150 3 25 chr17 5330868 5331182 -80107298 + AluJo SINE Alu 1 307 -5 491 369 84 8 chr17 5331199 5331689 -80106791 + L2 LINE L2 2373 2899 -415 * 897 110 18 78 chr17 5331675 5331731 -80106749 - MER5A DNA MER1_type -4 185 127 2431 82 0 0 chr17 5331731 5332023 -80106457 + AluSg SINE Alu 1 292 -18 897 110 18 78 chr17 5332023 5332160 -80106320 - MER5A DNA MER1_type -62 127 5 702 251 174 20 chr17 5332159 5332510 -80105970 + L2 LINE L2 2868 3272 0 * 182 146 0 24 chr17 5332708 5332749 -80105731 + (ATGGTG)n Simple_repeat Simple_repeat 6 45 0 2349 117 0 0 chr17 5332930 5333238 -80105242 - AluSg SINE Alu -2 308 1 1291 124 0 0 chr17 5333238 5333415 -80105065 - AluY SINE Alu -8 303 127 1051 227 99 16 chr17 5333835 5334157 -80104323 - LTR16A LTR ERVL -4 446 98 517 284 119 35 chr17 5335122 5335516 -80102964 + L2 LINE L2 2862 3288 -25 246 62 0 0 chr17 5335517 5335549 -80102931 + (TGAA)n Simple_repeat Simple_repeat 1 32 0 25 31 0 0 chr17 5335653 5335685 -80102795 + AT_rich Low_complexity Low_complexity 1 32 0 2076 101 40 4 chr17 5335685 5335962 -80102518 - AluSx SINE Alu -25 287 1 492 200 83 0 chr17 5335980 5336100 -80102380 - MIR SINE MIR -72 190 61 245 184 13 92 chr17 5336697 5336773 -80101707 - AluYb8 SINE Alu -1 307 238 * 359 62 0 0 chr17 5336742 5336790 -80101690 - Alu SINE Alu -254 48 1 714 284 80 12 chr17 5336810 5337134 -80101346 + L1MC4a LINE L1 5591 5936 -1872 371 307 37 0 chr17 5337345 5337471 -80101009 + MIR SINE MIR 27 160 -48 2052 146 0 3 chr17 5337832 5338133 -80100347 - AluSx SINE Alu -7 305 6 190 211 79 0 chr17 5338317 5338355 -80100125 - MIR SINE MIR -77 185 145 768 273 86 49 chr17 5338990 5339506 -80098974 + L2 LINE L2 2702 3231 -82 557 137 16 24 chr17 5339506 5339630 -80098850 + CT-rich Low_complexity Low_complexity 1 123 0 2194 92 0 0 chr17 5339630 5339922 -80098558 - AluSx SINE Alu -20 292 1 356 296 11 11 chr17 5339922 5340010 -80098470 + L2 LINE L2 3226 3313 0 220 295 30 60 chr17 5340211 5340377 -80098103 - L2 LINE L2 -464 2850 2690 645 105 0 0 chr17 5340380 5340466 -80098014 + AluSg/x SINE Alu 212 297 -12 2886 250 99 44 chr17 5340673 5341576 -80096904 + MER45C DNA AcHobo 2 953 0 730 226 0 0 chr17 5341959 5342096 -80096384 + FRAM SINE Alu 5 141 -35 914 111 0 16 chr17 5342115 5342358 -80096122 + (CA)n Simple_repeat Simple_repeat 1 239 0 394 336 52 42 chr17 5342861 5343111 -80095369 + MIR SINE MIR 3 253 -9 639 214 16 8 chr17 5343423 5343598 -80094882 + L1MA9 LINE L1 5874 6056 -244 264 203 72 0 chr17 5343812 5343881 -80094599 + MIR SINE MIR 49 122 -86 215 143 0 120 chr17 5343899 5344032 -80094448 + (CATA)n Simple_repeat Simple_repeat 3 119 0 313 370 66 9 chr17 5344044 5344255 -80094225 - MIR SINE MIR -9 253 31 1195 314 165 33 chr17 5344666 5345698 -80092782 + L2 LINE L2 959 2126 -1188 6443 208 44 66 chr17 5345740 5346070 -80092410 - L1M4 LINE L1 -1495 4651 4315 1769 155 3 7 chr17 5346070 5346373 -80092107 - AluJb SINE Alu -10 302 1 6443 208 44 66 chr17 5346373 5347646 -80090834 - L1M4 LINE L1 -1831 4315 3015 5164 138 26 20 chr17 5347646 5348550 -80089930 - L1MC1 LINE L1 0 6333 5424 6443 208 44 66 chr17 5348550 5348571 -80089909 - L1M4 LINE L1 -3131 3015 2995 1451 203 3 20 chr17 5348571 5348866 -80089614 - AluJo SINE Alu -22 290 1 6443 208 44 66 chr17 5348866 5349199 -80089281 - L1M4 LINE L1 -3151 2995 2736 1078 299 68 82 chr17 5349234 5350007 -80088473 + L2 LINE L2 2294 3051 -221 236 283 103 48 chr17 5350549 5350694 -80087786 + L2 LINE L2 3120 3272 -41 34 42 0 0 chr17 5350719 5350767 -80087713 + AT_rich Low_complexity Low_complexity 1 48 0 1493 178 7 4 chr17 5351531 5351806 -80086674 + AluJo SINE Alu 1 276 -36 351 0 0 0 chr17 5351809 5351848 -80086632 + (CA)n Simple_repeat Simple_repeat 1 39 0 21 0 0 0 chr17 5351975 5351996 -80086484 + AT_rich Low_complexity Low_complexity 1 21 0 359 316 15 7 chr17 5352461 5352597 -80085883 + L1ME4a LINE L1 5712 5848 -273 1852 121 4 4 chr17 5352607 5352880 -80085600 + AluSx SINE Alu 6 278 -34 192 40 0 0 chr17 5352880 5352905 -80085575 + (TCTCTG)n Simple_repeat Simple_repeat 4 28 0 423 0 0 0 chr17 5352907 5352954 -80085526 + (CA)n Simple_repeat Simple_repeat 2 48 0 1663 184 0 13 chr17 5352959 5353275 -80085205 + AluJb SINE Alu 1 312 0 1801 98 11 11 chr17 5353418 5353684 -80084796 - AluSq SINE Alu -15 298 33 333 115 0 0 chr17 5354135 5354196 -80084284 - AluJo SINE Alu -1 301 241 879 194 0 22 chr17 5354196 5354376 -80084104 - AluJo SINE Alu -136 176 1 430 276 104 27 chr17 5355032 5355253 -80083227 - MIR SINE MIR -12 250 13 443 231 56 0 chr17 5356368 5356476 -80082004 - MER81 DNA DNA 0 114 1 1958 95 14 11 chr17 5357220 5357504 -80080976 - AluSq SINE Alu -28 285 1 1843 152 0 7 chr17 5357583 5357886 -80080594 - AluSx SINE Alu -11 301 1 245 259 179 9 chr17 5358099 5358211 -80080269 + L2 LINE L2 3179 3309 -4 533 218 9 9 chr17 5360839 5360949 -80077531 - L2 LINE L2 -5 3308 3199 263 203 177 0 chr17 5360928 5361007 -80077473 + MIR SINE MIR 60 152 -56 * 554 277 100 4 chr17 5361223 5361454 -80077026 + LTR16C LTR ERVL 238 490 -1 2136 103 7 0 chr17 5361634 5361936 -80076544 - AluSq SINE Alu -9 304 1 2595 7 0 0 chr17 5362034 5362323 -80076157 - AluYb8 SINE Alu -29 289 1 340 281 16 16 chr17 5363153 5363274 -80075206 + L1PA12 LINE L1 2182 2302 -5279 5627 198 16 18 chr17 5363312 5364608 -80073872 + L1PA15 LINE L1 1231 2522 -4275 29 0 0 0 chr17 5364613 5364642 -80073838 + AT_rich Low_complexity Low_complexity 1 29 0 6818 126 23 2 chr17 5364642 5365315 -80073165 - L1MA1 LINE L1 -4 7717 7002 2364 83 0 0 chr17 5365315 5365617 -80072863 - AluY SINE Alu -9 302 1 6818 126 23 2 chr17 5365617 5366230 -80072250 - L1MA1 LINE L1 -719 7002 6403 * 12086 139 34 13 chr17 5366221 5369575 -80068905 - L1MA1 LINE L1 -2457 5108 1684 * 13221 220 84 12 chr17 5369574 5372789 -80065691 + L1PA15 LINE L1 2507 5984 -832 1826 136 31 3 chr17 5372789 5373083 -80065397 + AluSx SINE Alu 1 302 -10 13221 220 84 12 chr17 5373083 5373185 -80065295 + L1PA15 LINE L1 5984 6077 -739 42905 55 6 3 chr17 5373186 5375011 -80063469 + L1PA5 LINE L1 2 1820 -4334 2267 88 0 10 chr17 5375011 5375316 -80063164 - AluY SINE Alu -8 303 2 42905 55 6 3 chr17 5375316 5379623 -80058857 + L1PA5 LINE L1 1820 6152 -2 358 223 0 8 chr17 5379623 5379714 -80058766 + MLT2B1 LTR ERVL 132 220 -177 4017 134 41 61 chr17 5379714 5380305 -80058175 + L1PA15 LINE L1 6064 6638 -178 2134 103 0 6 chr17 5380305 5380616 -80057864 + AluY SINE Alu 1 309 -2 4017 134 41 61 chr17 5380616 5380779 -80057701 + L1PA15 LINE L1 6638 6803 -13 300 146 0 0 chr17 5381288 5381343 -80057137 - L1PA16 LINE L1 -6 6160 6106 377 333 133 36 chr17 5381614 5381839 -80056641 + MIR SINE MIR 9 255 -7 188 218 18 18 chr17 5381884 5381939 -80056541 - MIR3 SINE MIR -144 64 10 182 238 200 25 chr17 5383398 5383478 -80055002 + MIR SINE MIR 33 126 -82 219 69 0 0 chr17 5383533 5383562 -80054918 + (CAG)n Simple_repeat Simple_repeat 1 29 0 702 266 119 5 chr17 5383574 5383792 -80054688 - MIR SINE MIR -13 249 7 206 224 0 20 chr17 5385631 5385680 -80052800 + MIR SINE MIR 104 145 -63 1512 117 51 40 chr17 5385717 5385990 -80052490 - AluSx SINE Alu -36 276 1 1558 242 58 58 chr17 5386174 5386724 -80051756 - MER21B LTR ERV1 -75 788 239 857 245 40 20 chr17 5386727 5386976 -80051504 + L2 LINE L2 2531 2784 -530 839 155 0 8 chr17 5386983 5387112 -80051368 + FLAM_C SINE Alu 6 133 -10 1783 119 25 21 chr17 5387126 5387411 -80051069 + AluSq SINE Alu 1 286 -27 216 0 0 0 chr17 5387424 5387448 -80051032 + (CAA)n Simple_repeat Simple_repeat 2 25 0 834 280 217 18 chr17 5387460 5387895 -80050585 + L2 LINE L2 2776 3295 -18 1864 209 44 38 chr17 5388949 5389451 -80049029 - LTR10B LTR ERV1 0 505 1 202 194 0 0 chr17 5389594 5389630 -80048850 + CT-rich Low_complexity Low_complexity 3 38 0 835 215 81 48 chr17 5389975 5390157 -80048323 - L1MD3 LINE L1 0 8042 7857 1909 125 3 29 chr17 5390157 5390469 -80048011 - AluSx SINE Alu -8 304 1 835 215 81 48 chr17 5390469 5390596 -80047884 - L1MD3 LINE L1 -185 7857 7736 488 313 16 61 chr17 5390819 5391152 -80047328 - L1MC4a LINE L1 -330 5912 5591 386 283 72 81 chr17 5391289 5391655 -80046825 + L1M4 LINE L1 1239 3902 -2742 553 296 91 78 chr17 5391657 5392556 -80045924 + L1M4c LINE L1 819 3739 -2643 417 294 16 16 chr17 5393170 5393296 -80045184 - FLAM_A SINE Alu -6 127 2 374 87 5 103 chr17 5393488 5393683 -80044797 + (TGGGGG)n Simple_repeat Simple_repeat 2 177 0 * 436 33 50 83 chr17 5393644 5393825 -80044655 + (GTGTG)n Simple_repeat Simple_repeat 4 178 0 357 96 60 42 chr17 5393850 5394017 -80044463 + (GGGTG)n Simple_repeat Simple_repeat 5 174 0 567 98 12 49 chr17 5394080 5394243 -80044237 + (TGGG)n Simple_repeat Simple_repeat 1 157 0 375 239 0 0 chr17 5394247 5394364 -80044116 + G-rich Low_complexity Low_complexity 1 117 0 2165 265 37 23 chr17 5394783 5395640 -80042840 - L1M4 LINE L1 -2147 3999 3131 1221 160 113 47 chr17 5397357 5397701 -80040779 + L1MB3 LINE L1 5816 6182 -1 284 275 75 6 chr17 5397949 5398109 -80040371 + L1ME LINE L1 5274 5444 -677 2050 122 3 0 chr17 5398113 5398417 -80040063 + AluSx SINE Alu 7 311 -1 1395 203 52 41 chr17 5398713 5399102 -80039378 + L1ME2 LINE L1 5755 6144 -20 1513 184 122 6 chr17 5399327 5399663 -80038817 + L1MC4 LINE L1 6529 6903 -1139 21 0 0 0 chr17 5399667 5399688 -80038792 + AT_rich Low_complexity Low_complexity 1 21 0 1361 177 3 46 chr17 5399691 5399974 -80038506 + AluJo SINE Alu 5 275 -37 497 272 181 33 chr17 5400037 5400362 -80038118 + L1ME LINE L1 5430 5804 -317 1396 194 0 11 chr17 5400435 5400708 -80037772 - AluJb SINE Alu -21 291 22 251 143 0 24 chr17 5400713 5400755 -80037725 - FAM SINE Alu -35 144 104 * 297 145 84 72 chr17 5400741 5400824 -80037656 - FAM SINE Alu -31 144 61 424 113 0 0 chr17 5401065 5401136 -80037344 + Alu SINE Alu 241 311 -1 209 301 243 10 chr17 5401159 5401262 -80037218 - MIR3 SINE MIR -78 130 4 2075 116 3 0 chr17 5403254 5403555 -80034925 - AluSx SINE Alu -10 302 1 21 57 0 0 chr17 5404937 5404972 -80033508 + AT_rich Low_complexity Low_complexity 1 35 0 719 140 18 0 chr17 5404972 5405086 -80033394 - FLAM_C SINE Alu -26 117 2 230 317 39 29 chr17 5405679 5405783 -80032697 - L2 LINE L2 -240 3032 2928 2094 109 0 3 chr17 5405863 5406156 -80032324 - AluSq SINE Alu -21 292 1 390 313 50 56 chr17 5406439 5406618 -80031862 - MER5B DNA MER1_type 0 178 1 23 0 0 0 chr17 5407831 5407854 -80030626 + GC_rich Low_complexity Low_complexity 1 23 0 687 181 0 0 chr17 5408740 5408845 -80029635 + AluSg/x SINE Alu 146 250 -62 1216 159 0 26 chr17 5408845 5409077 -80029403 + AluJb SINE Alu 85 310 -2 2025 135 3 0 chr17 5409141 5409444 -80029036 - AluSx SINE Alu -8 304 1 959 266 54 43 chr17 5409444 5409793 -80028687 - MER67C LTR ERV1 -201 509 157 272 321 199 36 chr17 5409819 5410180 -80028300 - L2 LINE L2 -2231 1083 664 1079 172 35 25 chr17 5411487 5411690 -80026790 - AluJo SINE Alu -22 290 86 750 234 177 54 chr17 5412547 5412785 -80025695 + MLT1D LTR MaLR 1 258 -132 2256 86 3 3 chr17 5412785 5413086 -80025394 + AluSx SINE Alu 1 301 -11 750 234 177 54 chr17 5413086 5413238 -80025242 + MLT1D LTR MaLR 258 390 0 1929 125 10 7 chr17 5413866 5414170 -80024310 + AluSx SINE Alu 1 305 -7 854 173 0 37 chr17 5414170 5414320 -80024160 + AluSg/x SINE Alu 134 288 -24 279 0 0 0 chr17 5414320 5414351 -80024129 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1741 160 0 10 chr17 5414351 5414651 -80023829 + AluJb SINE Alu 2 298 -14 2362 211 49 42 chr17 5414665 5415235 -80023245 + L1M4 LINE L1 3750 4327 -1819 1708 168 0 7 chr17 5415235 5415532 -80022948 - AluJo SINE Alu -17 295 1 2362 211 49 42 chr17 5415532 5415654 -80022826 + L1M4 LINE L1 4327 4447 -1699 261 108 0 0 chr17 5415657 5415694 -80022786 - THE1B LTR MaLR 0 364 328 1109 194 0 0 chr17 5415694 5415911 -80022569 + L1M4 LINE L1 4591 4807 -1339 806 144 0 0 chr17 5415923 5416041 -80022439 + AluSq/x SINE Alu 1 118 -194 1151 123 0 0 chr17 5416077 5416247 -80022233 - AluSg/x SINE Alu -12 300 131 806 133 7 7 chr17 5416259 5416394 -80022086 - AluYa5 SINE Alu -30 281 147 881 151 0 7 chr17 5416900 5417073 -80021407 - AluJb SINE Alu 0 311 140 2132 102 7 3 chr17 5417086 5417389 -80021091 - AluSx SINE Alu -8 304 1 297 252 26 52 chr17 5417723 5417838 -80020642 - L1ME LINE L1 -309 5855 5744 2037 120 3 0 chr17 5418242 5418534 -80019946 + AluSx SINE Alu 1 293 -19 306 276 62 53 chr17 5419501 5419744 -80018736 - L1MEd LINE L1 -4894 1225 981 310 303 80 55 chr17 5419834 5420072 -80018408 - HAL1 LINE L1 -1410 1097 854 2150 112 0 0 chr17 5420776 5421070 -80017410 + AluSx SINE Alu 1 294 -18 347 287 19 9 chr17 5421106 5421214 -80017266 + MIR SINE MIR 154 262 0 3793 115 32 2 chr17 5421253 5421808 -80016672 + LTR26 LTR ERV1 1 572 -31 387 314 51 22 chr17 5422052 5422189 -80016291 + MIR SINE MIR 51 191 -71 268 291 0 78 chr17 5423523 5423664 -80014816 - LTR16C LTR ERVL -15 476 347 2103 207 27 56 chr17 5423881 5424399 -80014081 + MLT1D LTR MaLR 1 503 -2 384 283 123 65 chr17 5424751 5424872 -80013608 - L2 LINE L2 -15 3298 3186 2233 98 0 0 chr17 5424872 5425168 -80013312 + AluSx SINE Alu 1 296 -16 384 283 123 65 chr17 5425168 5425371 -80013109 - L2 LINE L2 -127 3186 2955 328 307 45 61 chr17 5425671 5425866 -80012614 + MIR SINE MIR 7 198 -61 429 20 0 0 chr17 5426035 5426085 -80012395 + (GA)n Simple_repeat Simple_repeat 1 50 0 387 228 10 10 chr17 5426386 5426487 -80011993 - L1MD2 LINE L1 -3 6356 6256 2291 80 0 3 chr17 5427108 5427409 -80011071 + AluY SINE Alu 1 300 -11 367 269 56 9 chr17 5428067 5428175 -80010305 - MIR SINE MIR -111 151 39 399 291 0 47 chr17 5428446 5428573 -80009907 + MIR3 SINE MIR 10 130 -78 290 248 8 66 chr17 5428583 5428704 -80009776 + MIR SINE MIR 92 205 -57 804 100 0 0 chr17 5429579 5429699 -80008781 + (TTCTC)n Simple_repeat Simple_repeat 4 123 0 2205 81 0 0 chr17 5429699 5429984 -80008496 - AluSq SINE Alu -28 285 1 514 231 84 30 chr17 5430211 5430366 -80008114 - MIR SINE MIR -63 145 7 739 167 8 23 chr17 5431008 5431140 -80007340 - FLAM_C SINE Alu 0 133 4 1982 134 0 3 chr17 5431149 5431447 -80007033 - AluSx SINE Alu -15 297 1 2028 110 23 3 chr17 5431455 5431754 -80006726 - AluSx SINE Alu -7 305 1 310 289 11 11 chr17 5431864 5431954 -80006526 - MIR3 SINE MIR -27 181 92 554 296 47 28 chr17 5432375 5432588 -80005892 - MIR SINE MIR -37 225 9 1378 172 97 0 chr17 5433760 5434028 -80004452 + MLT1D LTR MaLR 1 294 -211 355 305 31 23 chr17 5484087 5484215 -79954265 - L2 LINE L2 -6 3307 3179 312 283 7 3 chr17 5484452 5484590 -79953890 + MIR SINE MIR 48 226 -36 358 305 52 55 chr17 5485215 5485559 -79952921 - L2 LINE L2 -94 3178 2836 287 304 29 0 chr17 5485632 5485734 -79952746 + MIR SINE MIR 36 140 -68 702 285 170 16 chr17 5485766 5486078 -79952402 - L2 LINE L2 0 3313 2954 391 259 61 27 chr17 5486092 5486239 -79952241 - MIR SINE MIR -27 235 84 258 105 0 0 chr17 5486470 5486508 -79951972 + (TCTCCC)n Simple_repeat Simple_repeat 2 39 0 1984 134 25 0 chr17 5486508 5486792 -79951688 - AluJo SINE Alu -21 291 1 353 288 34 68 chr17 5486904 5487050 -79951430 - L1ME4a LINE L1 -14 6107 5967 343 131 321 36 chr17 5487160 5487244 -79951236 + AluJb SINE Alu 1 108 -194 188 264 94 0 chr17 5487653 5487706 -79950774 - MIR SINE MIR -99 163 106 752 261 61 8 chr17 5488798 5489043 -79949437 - MIR SINE MIR 0 262 5 1891 127 22 120 chr17 5489081 5489497 -79948983 + THE1C LTR MaLR 1 375 0 222 281 101 96 chr17 5490556 5490734 -79947746 + L3 LINE CR1 274 452 -1125 230 283 81 40 chr17 5490761 5490860 -79947620 - MIR SINE MIR -82 180 78 402 305 168 20 chr17 5490931 5491223 -79947257 + L3 LINE CR1 427 761 -816 199 188 0 0 chr17 5491268 5491300 -79947180 + MIR SINE MIR 76 107 -155 556 290 53 0 chr17 5491424 5491593 -79946887 + MIR SINE MIR 6 183 -79 691 306 107 31 chr17 5491746 5491858 -79946622 + L2 LINE L2 2722 2824 -489 5129 74 8 46 chr17 5491858 5492576 -79945904 + LTR8 LTR ERV1 1 691 0 691 306 107 31 chr17 5492576 5493015 -79945465 + L2 LINE L2 2824 3313 0 291 243 36 45 chr17 5494833 5494944 -79943536 - MIR SINE MIR -127 135 26 517 249 68 39 chr17 5495450 5495888 -79942592 + L1ME4a LINE L1 5562 6041 -80 1085 216 98 53 chr17 5496072 5496451 -79942029 + MSTD LTR MaLR 1 396 0 325 253 0 13 chr17 5497251 5497330 -79941150 + Charlie8 DNA MER1_type 1347 1424 -993 363 261 0 63 chr17 5497804 5497915 -79940565 - MIR SINE MIR -88 120 17 581 237 72 20 chr17 5498267 5498419 -79940061 + MIR SINE MIR 28 187 -75 223 122 122 0 chr17 5498547 5498588 -79939892 + MIR SINE MIR 176 221 -41 2069 105 0 3 chr17 5500738 5501024 -79937456 + AluSx SINE Alu 21 305 -7 217 349 28 28 chr17 5501201 5501310 -79937170 + MIR SINE MIR 37 145 -117 333 277 109 25 chr17 5501665 5501784 -79936696 + MLT1I LTR MaLR 18 146 -263 369 211 58 19 chr17 5501943 5502047 -79936433 + MLT1G LTR MaLR 483 590 0 518 261 187 13 chr17 5502086 5502252 -79936228 - L1MC4a LINE L1 -552 5569 5622 1366 129 35 22 chr17 5502252 5502484 -79935996 - MER46A DNA MER2_type -1 235 1 518 261 187 13 chr17 5502484 5502627 -79935853 - L1MC4a LINE L1 -498 5623 5506 1010 243 72 40 chr17 5502729 5503005 -79935475 - MER113 DNA MER1_type? 0 521 227 1504 142 32 21 chr17 5503005 5503287 -79935193 - L1MA8 LINE L1 -1 6290 6006 1010 243 72 40 chr17 5503287 5503410 -79935070 - MER113 DNA MER1_type? -294 227 109 1940 210 83 19 chr17 5503431 5503685 -79934795 - L1MC4a LINE L1 0 7808 7572 2191 106 143 13 chr17 5503685 5504064 -79934416 + MSTA LTR MaLR 1 428 0 1940 210 83 19 chr17 5504064 5504276 -79934204 - L1MC4a LINE L1 -236 7572 7312 359 266 0 21 chr17 5505340 5505434 -79933046 - L2 LINE L2 -34 3279 3188 381 117 17 0 chr17 5505853 5505913 -79932567 - MSTB LTR MaLR 0 432 372 1261 112 32 5 chr17 5505913 5506101 -79932379 + AluSq SINE Alu 99 291 -22 1884 188 42 6 chr17 5506101 5506462 -79932018 - MSTB LTR MaLR -52 374 1 383 312 30 21 chr17 5506731 5506994 -79931486 + MLT1J2 LTR MaLR 109 435 -15 241 176 20 0 chr17 5507263 5507314 -79931166 - MIR SINE MIR -64 198 147 1068 204 0 18 chr17 5507314 5507539 -79930941 - AluJo SINE Alu -5 307 87 297 0 0 0 chr17 5507543 5507576 -79930904 + (TC)n Simple_repeat Simple_repeat 2 34 0 403 245 189 0 chr17 5507576 5507682 -79930798 - MIR SINE MIR -123 139 14 1054 266 98 77 chr17 5508407 5508771 -79929709 - MLT1G3 LTR MaLR -17 513 177 2143 110 0 0 chr17 5508771 5509079 -79929401 + AluSq SINE Alu 1 308 -5 1054 266 98 77 chr17 5509079 5509260 -79929220 - MLT1G3 LTR MaLR -353 177 1 298 261 31 39 chr17 5509359 5509489 -79928991 - LTR67 LTR ERVL 0 557 429 790 283 11 0 chr17 5509636 5509827 -79928653 + MIR SINE MIR 65 257 -5 2016 117 3 0 chr17 5509888 5510170 -79928310 - AluSx SINE Alu -25 287 5 212 281 101 34 chr17 5510176 5510265 -79928215 + L2 LINE L2 3177 3271 -1 2108 100 37 7 chr17 5510330 5510630 -79927850 - AluSp SINE Alu -4 309 1 1845 120 33 10 chr17 5510723 5510744 -79927736 - AluSq SINE Alu -6 307 288 1007 111 11 17 chr17 5510744 5510925 -79927555 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 1845 120 33 10 chr17 5510925 5511203 -79927277 - AluSq SINE Alu -25 288 1 221 322 161 71 chr17 5512741 5512996 -79925484 - L2 LINE L2 0 3272 2995 2101 96 28 0 chr17 5513010 5513301 -79925179 + AluSc SINE Alu 1 299 -10 806 304 23 5 chr17 5513312 5513532 -79924948 - MIR SINE MIR -2 260 37 647 317 44 26 chr17 5513730 5513957 -79924523 - MIR SINE MIR -12 250 20 195 45 0 68 chr17 5513957 5514001 -79924479 + (TTTTC)n Simple_repeat Simple_repeat 4 44 0 2259 99 0 6 chr17 5514003 5514316 -79924164 - AluSq SINE Alu 0 313 3 5273 42 12 9 chr17 5514340 5515442 -79923038 - SVA Other Other -954 1386 5 224 0 0 111 chr17 5515446 5515509 -79922971 + (GGGAGA)n Simple_repeat Simple_repeat 6 61 0 240 321 238 14 chr17 5515720 5516162 -79922318 + L2 LINE L2 2155 2695 -619 491 243 52 64 chr17 5516199 5516372 -79922108 + MIR SINE MIR 84 254 -8 268 328 134 0 chr17 5516392 5516511 -79921969 + L2 LINE L2 2713 2847 -467 307 158 0 0 chr17 5516582 5516639 -79921841 - L1MA8 LINE L1 -26 6265 6209 6304 235 81 30 chr17 5516679 5516714 -79921766 + L1MEc LINE L1 234 266 -5949 1514 186 53 42 chr17 5516714 5517075 -79921405 - MLT1A1 LTR MaLR 0 365 1 6304 235 81 30 chr17 5517075 5519447 -79919033 + L1MEc LINE L1 266 2720 -3495 9003 93 14 9 chr17 5519460 5520673 -79917807 + HSMAR1 DNA Mariner 5 1223 -64 7281 156 9 13 chr17 5520673 5520715 -79917765 + L1PB1 LINE L1 3796 3837 -2314 2911 88 6 135 chr17 5520715 5521235 -79917245 + MLT2A2 LTR ERVL 1 453 0 7281 156 9 13 chr17 5521235 5523553 -79914927 + L1PB1 LINE L1 3837 6150 -1 580 89 0 0 chr17 5523560 5523639 -79914841 + HSMAR1 DNA Mariner 1208 1286 -1 2119 98 0 55 chr17 5525306 5525633 -79912847 + AluSg SINE Alu 1 309 -1 219 280 0 0 chr17 5526154 5526204 -79912276 + CT-rich Low_complexity Low_complexity 3 52 0 2238 95 0 3 chr17 5527571 5527877 -79910603 + AluY SINE Alu 4 308 -3 2827 75 5 3 chr17 5528322 5528698 -79909782 + L1PA8 LINE L1 5796 6172 0 2377 167 50 27 chr17 5528739 5529224 -79909256 + L1MB3 LINE L1 5688 6183 0 410 321 99 9 chr17 5529235 5529447 -79909033 + L1MEd LINE L1 1210 1440 -4976 622 251 167 35 chr17 5529487 5529798 -79908682 - MLT1J LTR MaLR -43 468 117 232 208 0 19 chr17 5529823 5529876 -79908604 - MLT1L LTR MaLR -543 72 21 389 256 55 97 chr17 5529912 5530149 -79908331 + HAL1 LINE L1 1254 1466 -1041 2447 84 0 0 chr17 5530149 5530459 -79908021 + AluSx SINE Alu 1 310 -2 389 256 55 97 chr17 5530459 5530655 -79907825 + HAL1 LINE L1 1466 1669 -838 1558 221 42 32 chr17 5530830 5531008 -79907472 - L1M4 LINE L1 -824 5322 5147 2337 56 0 37 chr17 5531008 5531329 -79907151 - AluY SINE Alu -2 309 1 1558 221 42 32 chr17 5531329 5531584 -79906896 - L1M4 LINE L1 -999 5147 4885 213 313 0 0 chr17 5531933 5532000 -79906480 + T-rich Low_complexity Low_complexity 1 67 0 2230 101 0 0 chr17 5532241 5532539 -79905941 + AluSx SINE Alu 1 298 -14 834 154 7 13 chr17 5532674 5532823 -79905657 + AluJo SINE Alu 88 235 -77 771 274 89 78 chr17 5532835 5533187 -79905293 + L1MEd LINE L1 2223 2571 -3855 1902 131 0 39 chr17 5533187 5533499 -79904981 + AluSg SINE Alu 3 302 -8 771 274 89 78 chr17 5533499 5533742 -79904738 + L1MEd LINE L1 2571 2810 -3616 233 270 63 46 chr17 5534122 5534296 -79904184 + L1MEd LINE L1 3153 3329 -3097 454 322 7 20 chr17 5534534 5534683 -79903797 + MER5B DNA MER1_type 1 147 -31 471 293 104 30 chr17 5534700 5535257 -79903223 + L1M4 LINE L1 4131 4752 -1394 2107 150 3 15 chr17 5535257 5535598 -79902882 - MER1B DNA MER1_type 0 337 1 471 293 104 30 chr17 5535598 5535742 -79902738 + L1M4 LINE L1 4752 4884 -1262 784 268 91 78 chr17 5535762 5536259 -79902221 - MLT1J LTR MaLR 0 511 9 594 126 84 8 chr17 5536570 5536689 -79901791 + MER53 DNA DNA 1 128 -61 447 19 0 0 chr17 5536692 5536744 -79901736 + (CATA)n Simple_repeat Simple_repeat 3 54 0 6246 56 13 0 chr17 5537468 5538238 -79900242 - L1PA8A LINE L1 -28 6103 5324 189 333 0 18 chr17 5538242 5538299 -79900181 - MIR SINE MIR -133 75 20 2064 140 13 3 chr17 5539492 5539799 -79898681 - AluSg SINE Alu 0 310 1 379 244 81 81 chr17 5540184 5540231 -79898249 + L2 LINE L2 3117 3163 -150 2133 112 3 7 chr17 5540231 5540541 -79897939 - AluSx SINE Alu 0 309 1 379 244 81 81 chr17 5540541 5540689 -79897791 + L2 LINE L2 3162 3313 0 677 318 39 33 chr17 5540755 5541092 -79897388 - MLT1I LTR MaLR 0 409 71 616 147 104 61 chr17 5541354 5541373 -79897107 + MER21A LTR ERV1 6 23 -908 365 0 22 0 chr17 5541373 5541418 -79897062 + (TAGA)n Simple_repeat Simple_repeat 4 49 0 616 147 104 61 chr17 5541418 5541561 -79896919 + MER21A LTR ERV1 23 175 -756 * 2070 161 116 9 chr17 5541550 5541990 -79896490 + MER21B LTR ERV1 377 863 0 2004 106 0 15 chr17 5542251 5542524 -79895956 - AluSx SINE Alu -43 269 1 2243 110 3 49 chr17 5542861 5543188 -79895292 + AluSx SINE Alu 1 312 0 1328 171 38 46 chr17 5543581 5543844 -79894636 - AluJo SINE Alu -10 302 42 386 338 30 0 chr17 5544410 5544543 -79893937 - L3 LINE CR1 -1 1576 1440 535 314 12 17 chr17 5544566 5544738 -79893742 + MIR SINE MIR 90 260 -2 1345 104 6 0 chr17 5544856 5545029 -79893451 - AluSp SINE Alu -8 305 132 2478 96 0 0 chr17 5545029 5545341 -79893139 - AluSx SINE Alu 0 312 1 22 70 0 0 chr17 5545957 5546000 -79892480 + AT_rich Low_complexity Low_complexity 1 43 0 2327 80 0 48 chr17 5546337 5546651 -79891829 - AluSx SINE Alu -13 299 1 337 284 7 47 chr17 5546651 5546788 -79891692 + CT-rich Low_complexity Low_complexity 13 145 0 185 260 13 0 chr17 5546958 5547035 -79891445 + C-rich Low_complexity Low_complexity 4 81 0 290 274 32 19 chr17 5547045 5547202 -79891278 + (TCTCTG)n Simple_repeat Simple_repeat 3 161 0 180 111 0 0 chr17 5547213 5547240 -79891240 + (TCTCTG)n Simple_repeat Simple_repeat 2 28 0 3117 219 60 34 chr17 5548535 5549192 -79889288 - L1MD1 LINE L1 0 7808 7170 2182 114 3 0 chr17 5549192 5549490 -79888990 - AluSx SINE Alu -13 299 1 3117 219 60 34 chr17 5549490 5549706 -79888774 - L1MD1 LINE L1 -638 7170 6079 318 50 0 0 chr17 5549732 5549772 -79888708 + (TA)n Simple_repeat Simple_repeat 1 40 0 467 259 121 30 chr17 5550223 5550455 -79888025 + MLT1K LTR MaLR 329 581 -7 400 250 125 60 chr17 5550607 5550775 -79887705 + MIR SINE MIR 28 206 -56 1069 210 0 14 chr17 5551399 5551618 -79886862 - MER20 DNA MER1_type 0 219 4 609 266 27 23 chr17 5551623 5551812 -79886668 + MIR SINE MIR 1 197 -63 476 186 29 10 chr17 5551866 5551968 -79886512 + L2 LINE L2 3151 3254 -18 2545 77 3 0 chr17 5552578 5552889 -79885591 + AluSx SINE Alu 1 312 0 710 174 45 50 chr17 5553447 5553648 -79884832 + LTR45 LTR ERV1 326 525 0 331 346 78 7 chr17 5553798 5553951 -79884529 + L2 LINE L2 2562 2725 -589 365 314 129 16 chr17 5553974 5554292 -79884188 + L1ME4a LINE L1 5697 6050 -71 2287 95 7 3 chr17 5554443 5554737 -79883743 - AluSg SINE Alu -15 295 1 970 221 101 4 chr17 5554779 5555055 -79883425 - LTR16C LTR ERVL 0 491 189 2173 96 34 10 chr17 5555190 5555483 -79882997 + AluSx SINE Alu 1 300 -12 213 303 81 0 chr17 5555503 5555602 -79882878 + MIR SINE MIR 86 192 -70 324 0 0 0 chr17 5555606 5555642 -79882838 + (TG)n Simple_repeat Simple_repeat 2 37 0 379 141 13 51 chr17 5555644 5555722 -79882758 + MLT1A2 LTR MaLR 4 78 -296 1064 170 5 25 chr17 5555739 5555939 -79882541 + MLT1A2 LTR MaLR 179 374 0 699 186 9 0 chr17 5556385 5556498 -79881982 - MER81 DNA DNA 0 114 1 546 273 142 24 chr17 5558201 5558490 -79879990 + MLT1K LTR MaLR 17 339 -249 2067 127 0 3 chr17 5558949 5559264 -79879216 - AluSg SINE Alu 0 314 1 264 291 22 15 chr17 5560182 5560316 -79878164 + (TGGA)n Simple_repeat Simple_repeat 1 135 0 2323 96 3 0 chr17 5561487 5561779 -79876701 - AluSc SINE Alu -16 293 1 901 219 29 15 chr17 5561794 5561825 -79876655 - L1MA1 LINE L1 -380 5800 5771 1774 202 16 26 chr17 5561825 5562202 -79876278 - L1MB5 LINE L1 -8 6166 5794 4883 33 0 3 chr17 5562203 5562779 -79875701 + L1PA8 LINE L1 5594 6167 -5 901 219 29 15 chr17 5562779 5562995 -79875485 - L1MA1 LINE L1 -408 5772 5582 401 342 58 52 chr17 5562998 5563346 -79875134 + L2 LINE L2 2879 3228 -44 220 218 23 0 chr17 5563854 5563941 -79874539 + GA-rich Low_complexity Low_complexity 1 89 0 261 277 26 26 chr17 5564047 5564202 -79874278 + (CAGAGA)n Simple_repeat Simple_repeat 6 160 0 466 283 50 13 chr17 5564326 5564485 -79873995 - MIR SINE MIR -81 181 17 5996 146 105 89 chr17 5564559 5566228 -79872252 + pTR5 LTR ERV1 743 2438 0 2163 99 0 55 chr17 5566700 5567012 -79871468 + AluSc SINE Alu 6 300 -9 419 185 260 27 chr17 5567098 5567244 -79871236 + L2 LINE L2 3134 3313 0 205 319 104 0 chr17 5567375 5567510 -79870970 - L2 LINE L2 -560 2754 2606 361 133 0 80 chr17 5568067 5568180 -79870300 + (CCCCCA)n Simple_repeat Simple_repeat 2 105 0 347 310 161 35 chr17 5568609 5568957 -79869523 + L2 LINE L2 2873 3264 -8 252 246 35 70 chr17 5568971 5569085 -79869395 + MIR SINE MIR 29 138 -70 1017 259 17 4 chr17 5569160 5569399 -79869081 - MIR SINE MIR -10 252 11 626 246 191 5 chr17 5569422 5569621 -79868859 - MIR SINE MIR -7 255 20 252 402 0 9 chr17 5569639 5569746 -79868734 - MIR3 SINE MIR -54 154 49 629 253 69 35 chr17 5569885 5570207 -79868273 - MLT1H LTR MaLR -235 336 14 2371 94 7 0 chr17 5570217 5570516 -79867964 + AluSx SINE Alu 1 301 -11 2137 150 36 85 chr17 5571334 5571922 -79866558 + L1MB3 LINE L1 5625 6183 0 2402 98 0 3 chr17 5572619 5572924 -79865556 + AluSq SINE Alu 2 305 -8 182 333 65 36 chr17 5573251 5573352 -79865128 - MIR SINE MIR -23 239 131 2130 119 0 13 chr17 5573352 5573655 -79864825 + AluSx SINE Alu 1 299 -13 182 333 65 36 chr17 5573655 5573691 -79864789 - MIR SINE MIR -131 131 98 264 323 58 35 chr17 5573776 5574002 -79864478 - L2 LINE L2 -533 2781 2551 260 213 38 12 chr17 5574447 5574527 -79863953 + GA-rich Low_complexity Low_complexity 3 84 0 204 294 0 74 chr17 5575187 5575350 -79863130 + G-rich Low_complexity Low_complexity 12 162 0 344 333 108 5 chr17 5575554 5575740 -79862740 - MIR SINE MIR 0 262 58 2223 95 4 0 chr17 5575970 5576243 -79862237 - AluSx SINE Alu -38 274 1 796 191 114 64 chr17 5576516 5576736 -79861744 - MLT1D LTR MaLR 0 505 275 2556 206 36 10 chr17 5576819 5577405 -79861075 - MLT1H-int LTR MaLR -770 601 1 1736 217 2 42 chr17 5577407 5577817 -79860663 - MLT2C1 LTR ERVL -2 395 2 293 194 108 21 chr17 5578057 5578150 -79860330 - MLT1H LTR MaLR -13 536 436 439 282 161 10 chr17 5580525 5580802 -79857678 + MIR SINE MIR 4 252 -10 198 103 0 0 chr17 5580812 5580841 -79857639 + (CAT)n Simple_repeat Simple_repeat 2 30 0 31 44 0 0 chr17 5581032 5581077 -79857403 + AT_rich Low_complexity Low_complexity 1 45 0 185 284 123 25 chr17 5581118 5581199 -79857281 - MIR3 SINE MIR -33 175 87 1683 162 65 0 chr17 5581254 5581413 -79857067 - AluJo SINE Alu -11 301 154 194 88 0 29 chr17 5581413 5581447 -79857033 + (TTA)n Simple_repeat Simple_repeat 1 33 0 1683 162 65 0 chr17 5581447 5581565 -79856915 - AluJo SINE Alu -158 154 6 551 318 90 0 chr17 5581834 5582067 -79856413 - MIR SINE MIR -8 254 1 243 218 35 103 chr17 5582195 5582270 -79856210 + L2 LINE L2 3229 3299 -14 186 103 0 0 chr17 5582270 5582299 -79856181 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 243 218 35 103 chr17 5582299 5582310 -79856170 + L2 LINE L2 3299 3309 -4 2356 92 0 13 chr17 5582394 5582700 -79855780 + AluSx SINE Alu 1 302 -10 182 262 0 49 chr17 5582797 5582858 -79855622 - L2 LINE L2 -531 2783 2726 447 220 148 99 chr17 5584071 5584416 -79854064 + LTR33 LTR ERVL 2 363 -158 1102 285 103 14 chr17 5586226 5586664 -79851816 - L2 LINE L2 -8 3305 2829 219 250 88 15 chr17 5586897 5586965 -79851515 - L2 LINE L2 -23 3249 3177 291 315 33 0 chr17 5587329 5587421 -79851059 - MIR SINE MIR -78 184 90 546 279 85 5 chr17 5587425 5587626 -79850854 + LTR50 LTR ERVL 3 219 -576 406 295 179 0 chr17 5588674 5588847 -79849633 + MIR SINE MIR 58 261 -1 294 296 208 0 chr17 5588972 5589097 -79849383 + MIR SINE MIR 110 260 -2 934 356 59 41 chr17 5589161 5589741 -79848739 - L3 LINE CR1 -194 1383 788 2184 120 30 0 chr17 5589741 5590041 -79848439 - AluSx SINE Alu -3 309 1 934 356 59 41 chr17 5590041 5590125 -79848355 - L3 LINE CR1 -789 788 707 267 280 40 64 chr17 5590142 5590267 -79848213 - MIR SINE MIR -57 151 30 293 281 0 158 chr17 5590269 5590370 -79848110 - L3 LINE CR1 -4 1573 1536 1726 172 33 0 chr17 5590370 5590672 -79847808 - AluJo SINE Alu 0 312 1 293 281 0 158 chr17 5590672 5590830 -79847650 - L3 LINE CR1 -41 1536 1355 826 233 31 54 chr17 5591429 5591652 -79846828 + MER20 DNA MER1_type 2 219 0 630 222 50 61 chr17 5592337 5592535 -79845945 + MER63A DNA MER1_type 1 196 -14 553 190 12 104 chr17 5593467 5593630 -79844850 - MER58C DNA MER1_type -1 214 67 24 0 0 0 chr17 5594602 5594626 -79843854 + AT_rich Low_complexity Low_complexity 1 24 0 297 0 0 0 chr17 5594626 5594659 -79843821 + (TTA)n Simple_repeat Simple_repeat 2 34 0 1979 99 7 7 chr17 5594662 5594944 -79843536 - AluSx SINE Alu -30 282 1 264 349 23 0 chr17 5595876 5595962 -79842518 + L2 LINE L2 2686 2773 -541 479 167 9 0 chr17 5596021 5596135 -79842345 + (CA)n Simple_repeat Simple_repeat 1 115 0 408 232 80 115 chr17 5596483 5596948 -79841532 + L1MC4a LINE L1 5601 5824 -297 1821 174 32 32 chr17 5596972 5597414 -79841066 - L1MDa LINE L1 -4870 1670 1229 1076 160 26 90 chr17 5597427 5597695 -79840785 - L1MB8 LINE L1 -1 6177 5927 793 206 9 72 chr17 5597689 5597794 -79840686 - L1MDa LINE L1 -5306 1234 1149 * 2416 175 38 9 chr17 5597794 5598246 -79840234 - MLT1C LTR MaLR 0 467 3 793 206 9 72 chr17 5598246 5598363 -79840117 - L1MDa LINE L1 -5391 1149 1026 1509 181 199 6 chr17 5598363 5598530 -79839950 - MSTD LTR MaLR 0 396 263 186 43 0 0 chr17 5598530 5598553 -79839927 + (GA)n Simple_repeat Simple_repeat 2 24 0 1509 181 199 6 chr17 5598553 5598716 -79839764 - MSTD LTR MaLR -133 263 2 2258 229 262 21 chr17 5598716 5599529 -79838951 - L1MDa LINE L1 -5509 1031 23 440 308 21 12 chr17 5599560 5599751 -79838729 - L1 LINE L1 -2281 3865 3668 219 114 0 0 chr17 5600022 5600057 -79838423 + (T)n Simple_repeat Simple_repeat 1 35 0 578 320 119 50 chr17 5600188 5600826 -79837654 - L1 LINE L1 -2764 3382 2701 221 240 0 0 chr17 5601113 5601163 -79837317 + GA-rich Low_complexity Low_complexity 2 51 0 1753 120 0 0 chr17 5601386 5601636 -79836844 - AluSc SINE Alu -5 304 55 947 264 28 0 chr17 5602124 5602336 -79836144 + MIR SINE MIR 45 262 0 1567 169 196 88 chr17 5602816 5603347 -79835133 + LTR4 LTR ERV1 1 588 0 2086 259 87 32 chr17 5603802 5604185 -79834295 - HAL1 LINE L1 0 2507 2146 2010 154 3 0 chr17 5604185 5604491 -79833989 - AluSx SINE Alu -5 307 1 2086 259 87 32 chr17 5604491 5605004 -79833476 - HAL1 LINE L1 -361 2146 1562 1860 257 174 38 chr17 5605000 5605288 -79833192 - HAL1 LINE L1 -1165 1342 1095 * 2059 119 3 3 chr17 5605288 5605581 -79832899 - AluSc SINE Alu -16 293 1 1860 257 174 38 chr17 5605581 5605612 -79832868 - HAL1 LINE L1 -1412 1095 1070 3510 108 61 34 chr17 5605612 5605915 -79832565 + MER4B LTR ERV1 1 294 -316 2289 95 0 0 chr17 5605915 5606219 -79832261 - AluY SINE Alu -7 304 1 3510 108 61 34 chr17 5606219 5606509 -79831971 + MER4B LTR ERV1 294 610 0 1860 257 174 38 chr17 5606509 5607362 -79831118 - HAL1 LINE L1 -1437 1070 9 587 256 103 91 chr17 5607362 5607431 -79831049 - L1ME4a LINE L1 -3 6118 6051 2104 112 0 0 chr17 5607431 5607718 -79830762 + AluSx SINE Alu 26 312 0 587 256 103 91 chr17 5607718 5607934 -79830546 - L1ME4a LINE L1 -70 6051 5824 2284 82 3 0 chr17 5607934 5608228 -79830252 + AluSp SINE Alu 1 295 -18 587 256 103 91 chr17 5608228 5608359 -79830121 - L1ME4a LINE L1 -297 5824 5696 319 149 104 15 chr17 5608371 5608438 -79830042 + MER5B DNA MER1_type 72 144 -34 281 322 114 31 chr17 5608455 5608744 -79829736 - L1ME4a LINE L1 -2150 5658 5346 207 0 0 0 chr17 5609021 5609044 -79829436 + (CTG)n Simple_repeat Simple_repeat 2 24 0 2165 110 7 0 chr17 5609360 5609661 -79828819 - AluSx SINE Alu -9 303 1 797 216 42 6 chr17 5609914 5610081 -79828399 + MER5B DNA MER1_type 5 177 -1 343 217 250 0 chr17 5611016 5611136 -79827344 + MER5A DNA MER1_type 13 162 -27 528 223 54 34 chr17 5611142 5611290 -79827190 - MIR SINE MIR -110 152 2 228 274 81 40 chr17 5611389 5611513 -79826967 - L2 LINE L2 -212 3060 2932 1421 181 48 15 chr17 5612006 5612468 -79826012 - MER92B LTR ERV1 -2 552 1 401 263 54 70 chr17 5612844 5613030 -79825450 + MER5A DNA MER1_type 1 183 -6 * 425 289 58 28 chr17 5613018 5613339 -79825141 - L2 LINE L2 -215 3057 2727 433 333 88 5 chr17 5614527 5614743 -79823737 + L3 LINE CR1 1344 1577 0 368 261 185 0 chr17 5615257 5615376 -79823104 - MIR SINE MIR -5 257 117 3222 141 49 37 chr17 5615909 5616483 -79821997 - LTR1 LTR ERV1 -2 783 203 885 98 0 0 chr17 5616536 5616658 -79821822 - AluSq SINE Alu -13 300 179 676 91 0 0 chr17 5616658 5616746 -79821734 - AluSq SINE Alu -218 95 8 1101 93 115 11 chr17 5616746 5616928 -79821552 - LTR1 LTR ERV1 -584 201 1 299 196 22 76 chr17 5616990 5617048 -79821432 + HAL1 LINE L1 2409 2462 -45 1738 166 0 20 chr17 5617048 5617349 -79821131 - AluJo SINE Alu -17 295 1 299 196 22 76 chr17 5617349 5617382 -79821098 + HAL1 LINE L1 2462 2495 -12 1595 113 13 0 chr17 5617598 5617829 -79820651 - AluY SINE Alu -5 306 73 859 215 80 52 chr17 5618306 5618557 -79819923 + MIR SINE MIR 5 262 0 294 277 175 15 chr17 5618866 5619003 -79819477 - MER5A DNA MER1_type 0 189 31 2211 268 32 35 chr17 5620493 5621237 -79817243 + L1ME LINE L1 13 754 -5316 1733 15 0 0 chr17 5621341 5621538 -79816942 - L1P LINE L1 -1040 5106 4910 12060 26 1 2 chr17 5621538 5622947 -79815533 + L1P LINE L1 3515 4921 -1225 1645 113 41 15 chr17 5623066 5623141 -79815339 - L1PB3 LINE L1 -286 5868 5796 216 0 0 0 chr17 5623141 5623165 -79815315 + (CA)n Simple_repeat Simple_repeat 2 25 0 1645 113 41 15 chr17 5623165 5623355 -79815125 - L1PB3 LINE L1 -358 5796 5596 347 227 35 35 chr17 5623464 5623605 -79814875 - L1M4 LINE L1 -1481 4665 4525 991 265 0 0 chr17 5623741 5623964 -79814516 - MER58A DNA MER1_type 0 224 2 7965 17 0 4 chr17 5624071 5625097 -79813383 - L1PA3 LINE L1 -3 6152 5127 513 261 8 39 chr17 5625290 5625420 -79813060 - L2 LINE L2 -4 3309 3184 876 123 0 0 chr17 5625504 5625626 -79812854 + AluSq/x SINE Alu 14 135 -177 2125 132 0 0 chr17 5625626 5625936 -79812544 + AluSx SINE Alu 1 310 -2 2990 136 6 6 chr17 5625956 5626441 -79812039 + L1PA16 LINE L1 5682 6166 0 301 345 18 30 chr17 5626472 5626640 -79811840 - L2 LINE L2 -260 3053 2888 1832 164 59 0 chr17 5626791 5627114 -79811366 - MER54B LTR ERVL -451 342 1 199 265 61 10 chr17 5627167 5627265 -79811215 + L2 LINE L2 2853 2955 -317 233 271 0 12 chr17 5627692 5627777 -79810703 + GA-rich Low_complexity Low_complexity 1 84 0 384 326 98 36 chr17 5627779 5628601 -79809879 - L2 LINE L2 -82 3190 2316 302 336 18 0 chr17 5629870 5629983 -79808497 + MIR SINE MIR 34 148 -114 308 238 12 12 chr17 5630198 5630278 -79808202 + MIR SINE MIR 70 149 -113 2222 95 0 7 chr17 5630297 5630601 -79807879 - AluSg1 SINE Alu -7 302 1 1632 167 7 23 chr17 5630636 5630935 -79807545 + AluJb SINE Alu 1 294 -18 1288 237 219 9 chr17 5630950 5631406 -79807074 + L1MC4a LINE L1 7252 7803 -5 21 36 0 0 chr17 5631406 5631434 -79807046 + AT_rich Low_complexity Low_complexity 1 28 0 260 238 71 79 chr17 5632626 5632752 -79805728 + MIR SINE MIR 1 129 -79 292 271 12 12 chr17 5632944 5633029 -79805451 - L2 LINE L2 -31 3282 3198 688 271 52 49 chr17 5633200 5633548 -79804932 - L1MC/D LINE L1 -452 5669 5334 1670 141 65 3 chr17 5633648 5633938 -79804542 + AluSx SINE Alu 1 308 -4 3088 190 75 35 chr17 5635155 5635428 -79803052 - L1MB7 LINE L1 0 6184 5923 2430 50 3 0 chr17 5635428 5635729 -79802751 + AluY SINE Alu 1 302 -9 3088 190 75 35 chr17 5635729 5636232 -79802248 - L1MB7 LINE L1 -261 5923 5377 260 299 171 17 chr17 5636318 5636552 -79801928 - L1MC/D LINE L1 -1927 5881 5612 350 304 28 112 chr17 5636653 5636797 -79801683 + L3 LINE CR1 1381 1503 -74 2124 95 0 14 chr17 5636797 5637092 -79801388 - AluSx SINE Alu -19 293 3 350 304 28 112 chr17 5637092 5637161 -79801319 + L3 LINE CR1 1503 1576 -1 885 63 0 0 chr17 5637966 5638077 -79800403 - AluSc SINE Alu -10 299 189 2181 109 0 0 chr17 5638077 5638380 -79800100 + AluSg SINE Alu 3 305 -5 650 189 43 113 chr17 5638449 5638634 -79799846 + MER5B DNA MER1_type 7 178 0 270 282 13 0 chr17 5639149 5639227 -79799253 + MIR SINE MIR 57 135 -73 252 329 50 21 chr17 5639230 5639370 -79799110 - L3 LINE CR1 -137 1440 1297 2102 79 4 0 chr17 5639608 5639902 -79798578 + AluSx SINE Alu 16 310 0 602 298 124 3 chr17 5639971 5640330 -79798150 + L2 LINE L2 2623 3029 -284 1809 87 0 0 chr17 5640332 5640551 -79797929 - AluSg/x SINE Alu -19 293 75 395 119 0 0 chr17 5640552 5640611 -79797869 + AluS SINE Alu 5 63 -237 651 206 99 110 chr17 5640611 5640903 -79797577 + L2 LINE L2 3024 3312 -1 297 306 32 48 chr17 5640905 5641091 -79797389 + MIR SINE MIR 23 205 -57 2207 110 19 13 chr17 5641838 5642147 -79796333 - AluSx SINE Alu -1 311 1 672 211 146 89 chr17 5642157 5642493 -79795987 - L1ME3A LINE L1 0 6170 5816 244 195 110 0 chr17 5642862 5642944 -79795536 - L1ME LINE L1 -314 5856 5766 3738 122 14 4 chr17 5643045 5643595 -79794885 - LTR9B LTR ERV1 0 644 89 2333 71 10 3 chr17 5643595 5643892 -79794588 + AluY SINE Alu 1 299 -12 785 218 62 25 chr17 5643892 5644185 -79794295 - L1ME LINE L1 -639 5525 5224 1168 188 19 5 chr17 5645036 5645249 -79793231 - MER20 DNA MER1_type -3 216 1 558 294 84 33 chr17 5645550 5645849 -79792631 - MLT1K LTR MaLR 0 588 275 610 306 62 36 chr17 5646144 5646811 -79791669 - L1ME LINE L1 -2177 3969 3286 667 145 97 32 chr17 5647091 5647215 -79791265 + FLAM_C SINE Alu 1 132 -1 721 240 104 40 chr17 5648439 5648814 -79789666 - HAL1 LINE L1 -1012 1495 1097 1161 197 73 0 chr17 5648833 5649067 -79789413 + L1MB5 LINE L1 5858 6108 -66 460 290 52 72 chr17 5649167 5649376 -79789104 - HAL1 LINE L1 -1433 1074 873 2712 167 105 8 chr17 5649376 5649890 -79788590 + MLT1F1 LTR MaLR 4 567 0 460 290 52 72 chr17 5649890 5650028 -79788452 - HAL1 LINE L1 -1634 873 734 2076 125 0 4 chr17 5650401 5650680 -79787800 - AluSx SINE Alu -34 278 1 2302 100 0 0 chr17 5650958 5651249 -79787231 - AluSg SINE Alu -19 291 1 1035 213 0 82 chr17 5651316 5651560 -79786920 - MER58A DNA MER1_type 0 224 1 449 250 91 0 chr17 5651592 5651724 -79786756 + L1MD2 LINE L1 6211 6354 -5 1096 76 0 0 chr17 5651775 5651906 -79786574 + AluSp SINE Alu 2 132 -181 2294 96 13 0 chr17 5651908 5652210 -79786270 + AluSp SINE Alu 1 306 -7 974 156 6 31 chr17 5652540 5652700 -79785780 - FRAM SINE Alu -18 158 3 347 261 17 34 chr17 5653131 5653250 -79785230 - L2 LINE L2 -11 3261 3145 2471 91 0 0 chr17 5653859 5654168 -79784312 + AluSg SINE Alu 1 309 -1 182 194 0 0 chr17 5654404 5654440 -79784040 - L2 LINE L2 0 3313 3278 689 248 143 24 chr17 5654566 5655006 -79783474 - L2 LINE L2 -71 3242 2741 2385 79 0 3 chr17 5655009 5655300 -79783180 + AluSq SINE Alu 1 290 -23 457 121 33 0 chr17 5655300 5655391 -79783089 + G-rich Low_complexity Low_complexity 2 95 0 533 206 99 110 chr17 5655577 5655869 -79782611 - L2 LINE L2 -1 3312 3024 443 129 0 0 chr17 5655869 5655931 -79782549 - AluS SINE Alu -247 63 2 743 256 89 4 chr17 5655931 5656201 -79782279 - L2 LINE L2 -769 2545 2253 2297 95 0 13 chr17 5657674 5657979 -79780501 - AluY SINE Alu -10 301 1 267 319 25 8 chr17 5658156 5658275 -79780205 - MIR SINE MIR -29 233 113 378 303 36 18 chr17 5660150 5660315 -79778165 - L3 LINE CR1 -37 1540 1373 1686 263 70 92 chr17 5660585 5662061 -79776419 + L1MEc LINE L1 837 2237 -3978 983 234 128 35 chr17 5662061 5662104 -79776376 + L1M4 LINE L1 4287 4325 -1821 2322 115 0 0 chr17 5662104 5662408 -79776072 + AluSg SINE Alu 1 304 -6 983 234 128 35 chr17 5662408 5662740 -79775740 + L1M4 LINE L1 4325 4697 -1449 5539 148 50 35 chr17 5662747 5663139 -79775341 - Tigger3b DNA MER2_type -1797 1231 846 2276 117 0 0 chr17 5663139 5663448 -79775032 - AluSc SINE Alu 0 309 1 5539 148 50 35 chr17 5663448 5663691 -79774789 - Tigger3b DNA MER2_type -2182 846 608 189 0 0 0 chr17 5663691 5663712 -79774768 + (TATG)n Simple_repeat Simple_repeat 4 24 0 5539 148 50 35 chr17 5663712 5664002 -79774478 - Tigger3b DNA MER2_type -2420 608 286 2051 124 0 54 chr17 5664002 5664317 -79774163 + AluSq SINE Alu 1 298 -15 5539 148 50 35 chr17 5664317 5664431 -79774049 - Tigger3b DNA MER2_type -2742 286 175 1565 211 54 30 chr17 5664519 5665053 -79773427 + L1M4 LINE L1 4749 5343 -803 2574 68 0 3 chr17 5665078 5665385 -79773095 - AluY SINE Alu -5 306 1 1241 114 51 0 chr17 5665385 5665561 -79772919 - AluSg/x SINE Alu -3 309 125 378 291 7 11 chr17 5665610 5665760 -79772720 + MIR SINE MIR 21 168 -60 2745 42 0 0 chr17 5667067 5667377 -79771103 + AluY SINE Alu 1 310 -1 286 270 0 14 chr17 5667660 5667734 -79770746 - MIR SINE MIR -143 119 47 263 221 70 35 chr17 5668164 5668250 -79770230 - MIR SINE MIR -81 181 93 284 287 31 23 chr17 5668509 5668638 -79769842 + MIR3 SINE MIR 41 170 -38 1092 124 18 0 chr17 5668655 5668943 -79769537 + (TCCA)n Simple_repeat Simple_repeat 1 293 0 1029 227 10 0 chr17 5668994 5669192 -79769288 - MER58A DNA MER1_type -24 200 1 256 269 74 9 chr17 5669397 5669505 -79768975 - L2 LINE L2 -327 2986 2872 601 185 29 0 chr17 5670336 5670509 -79767971 + (TCCA)n Simple_repeat Simple_repeat 1 178 0 772 110 25 12 chr17 5670542 5670705 -79767775 + (TCCA)n Simple_repeat Simple_repeat 1 165 0 1285 110 0 0 chr17 5670732 5670905 -79767575 - AluSp SINE Alu -1 312 140 578 276 0 0 chr17 5671257 5671402 -79767078 + MIR SINE MIR 94 238 -24 202 320 96 32 chr17 5671990 5672209 -79766271 - L3 LINE CR1 -56 1521 1289 446 273 103 56 chr17 5672355 5672438 -79766042 + MLT1H LTR MaLR 25 103 -446 2255 85 0 10 chr17 5672438 5672731 -79765749 - AluSg SINE Alu -20 290 1 446 273 103 56 chr17 5672731 5673100 -79765380 + MLT1H LTR MaLR 103 543 -6 286 318 95 24 chr17 5673174 5673300 -79765180 + MIR3 SINE MIR 49 183 -25 2049 125 0 3 chr17 5673727 5674014 -79764466 - AluSx SINE Alu -26 286 1 231 308 53 24 chr17 5674339 5674508 -79763972 + L1MDa LINE L1 1534 1707 -4833 196 213 128 0 chr17 5674543 5674590 -79763890 - L2 LINE L2 0 3313 3261 282 114 10 44 chr17 5675462 5675514 -79762966 - MLT2C1 LTR ERVL 0 520 347 2450 150 61 74 chr17 5675589 5675698 -79762782 + LTR44 LTR ERV1 1 110 -409 2339 88 7 13 chr17 5675698 5676005 -79762475 - AluSx SINE Alu -7 305 1 2450 150 61 74 chr17 5676005 5676421 -79762059 + LTR44 LTR ERV1 110 519 0 2384 160 15 75 chr17 5677378 5677915 -79760565 + LTR57-int LTR ERVL 311 815 -4528 557 132 142 0 chr17 5677915 5678021 -79760459 + LTR49-int LTR ERV1 951 1071 -7049 * 785 235 53 30 chr17 5677981 5678245 -79760235 + LTR57-int LTR ERVL 1322 1591 -3752 * 1813 179 28 37 chr17 5678011 5678448 -79760032 + LTR49-int LTR ERV1 1317 1749 -6371 1316 171 100 150 chr17 5678460 5679282 -79759198 + LTR49-int LTR ERV1 2950 3730 -2868 2234 219 100 52 chr17 5679354 5679803 -79758677 + LTR49-int LTR ERV1 2477 2903 -3335 244 33 0 0 chr17 5679803 5679833 -79758647 - MADE1 DNA Mariner 0 80 51 2234 219 100 52 chr17 5679833 5680228 -79758252 + LTR49-int LTR ERV1 2903 3278 -2960 1868 141 0 14 chr17 5680228 5680518 -79757962 - AluSx SINE Alu -14 298 13 2234 219 100 52 chr17 5680518 5680914 -79757566 + LTR49-int LTR ERV1 3278 4964 -1274 2798 135 59 43 chr17 5681183 5681280 -79757200 + LTR44 LTR ERV1 1 95 -424 2554 54 0 0 chr17 5681280 5681576 -79756904 - AluY SINE Alu -15 296 1 2798 135 59 43 chr17 5681576 5681989 -79756491 + LTR44 LTR ERV1 95 519 0 1700 210 25 6 chr17 5681995 5682348 -79756132 - MLT2D LTR ERVL -54 360 1 2369 69 24 0 chr17 5682577 5682867 -79755613 + AluSc SINE Alu 1 297 -12 492 303 154 0 chr17 5682903 5683111 -79755369 - MIR SINE MIR -21 241 2 242 239 80 11 chr17 5683461 5683549 -79754931 - L2 LINE L2 -42 3230 3137 609 254 71 61 chr17 5683587 5683653 -79754827 - LTR16C LTR ERVL -28 463 399 2219 107 0 26 chr17 5683653 5683963 -79754517 + AluSx SINE Alu 1 302 -10 609 254 71 61 chr17 5683963 5684176 -79754304 - LTR16C LTR ERVL -92 399 181 2233 104 0 3 chr17 5684865 5685162 -79753318 - AluSq SINE Alu -4 309 14 362 299 21 36 chr17 5685258 5685452 -79753028 - L2 LINE L2 -2075 1239 1049 21 0 0 0 chr17 5685831 5685852 -79752628 + AT_rich Low_complexity Low_complexity 1 21 0 2578 62 0 0 chr17 5686363 5686672 -79751808 - AluY SINE Alu -2 309 1 575 171 117 0 chr17 5686744 5686855 -79751625 - MSTA LTR MaLR 0 428 305 3398 116 40 78 chr17 5686861 5687493 -79750987 - LTR1 LTR ERV1 0 785 178 29 47 0 0 chr17 5687523 5687566 -79750914 + AT_rich Low_complexity Low_complexity 1 43 0 330 86 32 75 chr17 5687583 5687769 -79750711 + (TATAA)n Simple_repeat Simple_repeat 2 179 0 * 348 111 64 23 chr17 5687728 5687899 -79750581 + (TA)n Simple_repeat Simple_repeat 1 178 0 210 235 12 25 chr17 5687900 5687981 -79750499 + (TTATA)n Simple_repeat Simple_repeat 5 84 0 211 74 56 68 chr17 5687994 5688156 -79750324 + (TATAA)n Simple_repeat Simple_repeat 5 164 0 2069 183 112 9 chr17 5688156 5689196 -79749284 - SATR1 Satellite Satellite -5 1147 1 1950 103 0 4 chr17 5689196 5689448 -79749032 - AluSq SINE Alu -62 251 1 1647 138 0 66 chr17 5689457 5689772 -79748708 - AluSg SINE Alu 0 310 20 935 128 78 11 chr17 5689780 5689960 -79748520 - LTR1 LTR ERV1 -593 192 1 1554 136 23 58 chr17 5689960 5690268 -79748212 - MSTA LTR MaLR -131 297 1 258 32 0 0 chr17 5690311 5690342 -79748138 + (TG)n Simple_repeat Simple_repeat 2 32 0 856 299 60 20 chr17 5690355 5691356 -79747124 - L1MC4a LINE L1 -529 5710 4957 1361 226 14 44 chr17 5691527 5691890 -79746590 - MLT1A1 LTR MaLR 0 365 14 1827 126 58 3 chr17 5692008 5692301 -79746179 - AluSx SINE Alu -3 309 1 665 97 0 124 chr17 5692402 5692547 -79745933 - AluY SINE Alu 0 311 185 980 308 128 22 chr17 5692548 5693460 -79745020 - L1MC4a LINE L1 -4326 2070 1062 2053 128 3 0 chr17 5693483 5693781 -79744699 - AluY SINE Alu -12 299 1 29 0 0 0 chr17 5694222 5694251 -79744229 + AT_rich Low_complexity Low_complexity 1 29 0 1672 120 89 0 chr17 5694251 5694509 -79743971 - L1PB3 LINE L1 -7 6147 5867 528 329 80 41 chr17 5694674 5695770 -79742710 - L1M4 LINE L1 -1872 4274 3136 392 167 14 14 chr17 5696241 5696313 -79742167 - MER68 LTR ERV1 -227 335 264 2158 117 0 0 chr17 5696904 5697204 -79741276 - AluSx SINE Alu -12 300 1 2765 195 19 35 chr17 5697401 5697971 -79740509 - MER68 LTR ERV1 0 562 2 2427 68 0 0 chr17 5698384 5698694 -79739786 - AluY SINE Alu -1 310 1 524 348 51 20 chr17 5698705 5699001 -79739479 + L2 LINE L2 2186 2490 -824 410 207 112 17 chr17 5699017 5699133 -79739347 - MLT1H LTR MaLR -2 547 421 496 293 122 11 chr17 5699150 5699338 -79739142 - MLT1H LTR MaLR -328 221 13 295 367 103 33 chr17 5699379 5699909 -79738571 + L2 LINE L2 2549 3129 -143 636 181 0 0 chr17 5699978 5700083 -79738397 + MER58B DNA MER1_type 225 329 -12 1149 218 5 0 chr17 5700809 5701020 -79737460 + MER58A DNA MER1_type 1 212 -12 756 115 0 44 chr17 5702446 5702559 -79735921 - AluSg/x SINE Alu -27 285 178 300 292 0 34 chr17 5702564 5702653 -79735827 + MIR SINE MIR 106 191 -71 2155 107 0 7 chr17 5702750 5703049 -79735431 - AluSx SINE Alu -15 297 1 1622 148 0 21 chr17 5703925 5704209 -79734271 - AluSc SINE Alu -3 306 29 305 302 87 8 chr17 5705081 5705207 -79733273 + MIR3 SINE MIR 69 204 -4 1033 49 18 18 chr17 5705336 5705499 -79732981 + (TTTC)n Simple_repeat Simple_repeat 4 166 0 337 130 43 0 chr17 5705507 5705576 -79732904 + CT-rich Low_complexity Low_complexity 2 73 0 1781 173 3 25 chr17 5705576 5705894 -79732586 - AluJo SINE Alu -1 311 1 603 363 116 3 chr17 5706215 5706604 -79731876 - L3 LINE CR1 -1 1576 1144 368 289 134 34 chr17 5706869 5707018 -79731462 - MIR3 SINE MIR -11 197 34 411 327 61 6 chr17 5707676 5707841 -79730639 + MIR SINE MIR 33 206 -56 560 200 9 0 chr17 5708012 5708122 -79730358 - MIR SINE MIR 0 262 152 1218 178 22 18 chr17 5708123 5708348 -79730132 + MER46A DNA MER2_type 3 228 -8 280 290 120 0 chr17 5708354 5708454 -79730026 - MIR SINE MIR -108 154 43 334 311 114 0 chr17 5708502 5708598 -79729882 - HAL1 LINE L1 -1016 1491 1375 2241 103 3 0 chr17 5708598 5708910 -79729570 - AluSp SINE Alu 0 313 1 334 311 114 0 chr17 5708910 5708945 -79729535 - HAL1 LINE L1 -1132 1375 1345 331 320 61 30 chr17 5708947 5709310 -79729170 - L1MEd LINE L1 -4886 1233 860 2089 131 0 6 chr17 5709854 5710168 -79728312 - AluSx SINE Alu 0 312 1 32 43 0 0 chr17 5710269 5710315 -79728165 + AT_rich Low_complexity Low_complexity 1 46 0 2058 97 0 58 chr17 5710517 5710847 -79727633 - AluSx SINE Alu -1 311 1 188 67 33 0 chr17 5712271 5712301 -79726179 + (TTCA)n Simple_repeat Simple_repeat 3 33 0 2178 79 10 0 chr17 5712303 5712593 -79725887 - AluSp SINE Alu -20 293 1 189 0 0 0 chr17 5713034 5713055 -79725425 + (T)n Simple_repeat Simple_repeat 1 21 0 944 191 46 128 chr17 5713577 5713750 -79724730 + MLT1B LTR MaLR 2 187 -203 2107 84 16 26 chr17 5713750 5714059 -79724421 + AluY SINE Alu 1 306 -5 944 191 46 128 chr17 5714059 5714179 -79724301 + MLT1B LTR MaLR 187 266 -124 1907 127 21 3 chr17 5714179 5714470 -79724010 + AluSx SINE Alu 1 296 -16 944 191 46 128 chr17 5714470 5714520 -79723960 + MLT1B LTR MaLR 266 318 -72 330 306 61 16 chr17 5714721 5714869 -79723611 - MIR SINE MIR -61 147 33 321 152 0 0 chr17 5717865 5717911 -79720569 + MER46A DNA MER2_type 1 46 -190 674 241 99 112 chr17 5718547 5719011 -79719469 + LTR33A LTR ERVL 66 523 0 356 298 158 14 chr17 5719077 5719439 -79719041 + L2 LINE L2 2460 2873 -441 2144 110 3 0 chr17 5719521 5719821 -79718659 - AluSx SINE Alu -11 301 1 542 365 36 18 chr17 5719853 5720130 -79718350 + L2 LINE L2 2966 3247 -25 919 148 228 0 chr17 5720844 5721033 -79717447 + MER46A DNA MER2_type 1 232 -4 1257 245 52 16 chr17 5721103 5721449 -79717031 + L1MD2 LINE L1 5978 6339 -20 2119 104 3 0 chr17 5721449 5721738 -79716742 - AluSg SINE Alu -20 290 1 1257 245 52 16 chr17 5721738 5721759 -79716721 + L1MD2 LINE L1 6339 6358 -1 459 152 0 0 chr17 5722527 5722606 -79715874 + (TG)n Simple_repeat Simple_repeat 1 79 0 302 323 57 31 chr17 5722783 5722975 -79715505 + MIR3 SINE MIR 1 197 -11 710 294 97 32 chr17 5723190 5723499 -79714981 - L3 LINE CR1 -106 1471 1143 2445 77 3 0 chr17 5723506 5723816 -79714664 - AluSp SINE Alu -2 311 1 237 292 52 0 chr17 5724123 5724219 -79714261 - L1ME LINE L1 -331 5790 5690 354 258 116 32 chr17 5724486 5724641 -79713839 + MIR SINE MIR 1 168 -94 1668 220 108 7 chr17 5724671 5725116 -79713364 - MLT1D LTR MaLR 0 505 16 1363 247 105 70 chr17 5725147 5725747 -79712733 + L2 LINE L2 2110 2730 -584 306 118 0 0 chr17 5726492 5726543 -79711937 - L1MB2 LINE L1 -1 6170 6120 1990 124 7 13 chr17 5726543 5726842 -79711638 - AluSq SINE Alu -16 297 1 362 297 120 0 chr17 5727783 5727958 -79710522 + MIR SINE MIR 51 246 -16 5105 56 0 0 chr17 5728372 5728993 -79709487 - L1PA8 LINE L1 0 6172 5552 180 250 0 0 chr17 5729087 5729123 -79709357 - MIR SINE MIR -70 192 157 375 23 0 0 chr17 5729280 5729324 -79709156 + (CA)n Simple_repeat Simple_repeat 2 45 0 1766 195 74 39 chr17 5729629 5729897 -79708583 - MLT1D LTR MaLR -4 501 209 204 67 0 0 chr17 5729897 5729927 -79708553 + (CACAT)n Simple_repeat Simple_repeat 4 33 0 1766 195 74 39 chr17 5729927 5730120 -79708360 - MLT1D LTR MaLR -296 209 24 253 247 47 47 chr17 5730363 5730448 -79708032 + ERVL LTR ERVL 3427 3511 -2253 2485 203 30 18 chr17 5730608 5731110 -79707370 - LTR40a LTR ERVL -4 515 8 212 149 257 40 chr17 5731172 5731246 -79707234 - MIR SINE MIR -66 196 107 684 320 44 55 chr17 5731301 5731484 -79706996 + ERVL LTR ERVL 4302 4485 -1279 2000 109 35 0 chr17 5731484 5731769 -79706711 - AluSp SINE Alu -18 295 1 684 320 44 55 chr17 5731769 5732041 -79706439 + ERVL LTR ERVL 4485 4752 -1012 378 241 23 11 chr17 5732103 5732190 -79706290 + ERVL LTR ERVL 4894 4981 -783 1939 144 0 0 chr17 5732694 5733000 -79705480 - AluSx SINE Alu -6 306 1 2205 92 0 13 chr17 5733119 5733425 -79705055 - AluSq SINE Alu -11 302 1 3316 152 29 15 chr17 5734014 5734285 -79704195 + L1MB3 LINE L1 5562 5828 -355 2262 95 0 3 chr17 5734285 5734590 -79703890 + AluSq SINE Alu 1 304 -9 3316 152 29 15 chr17 5734590 5734931 -79703549 + L1MB3 LINE L1 5828 6183 0 2121 124 0 3 chr17 5734942 5735256 -79703224 + AluSq SINE Alu 1 313 0 207 353 35 0 chr17 5735836 5735921 -79702559 + MIR SINE MIR 62 149 -59 186 80 9 0 chr17 5736640 5736715 -79701765 + (A)n Simple_repeat Simple_repeat 1 30 0 268 200 67 40 chr17 5736965 5737040 -79701440 - MER5B DNA MER1_type -101 77 1 381 307 200 5 chr17 5738122 5738327 -79700153 + MIR SINE MIR 17 261 -1 882 292 41 55 chr17 5738441 5738879 -79699601 + MLT1K LTR MaLR 140 571 -17 2110 110 0 0 chr17 5739875 5740175 -79698305 + AluY SINE Alu 1 300 -11 2172 124 51 28 chr17 5740481 5740837 -79697643 + THE1B LTR MaLR 1 364 0 2155 115 3 7 chr17 5742363 5742658 -79695822 - AluSq SINE Alu -19 294 1 353 282 147 29 chr17 5742836 5742957 -79695523 - MIR SINE MIR -70 192 44 2482 193 107 4 chr17 5742957 5743374 -79695106 - MLT1F1 LTR MaLR 0 567 86 198 0 0 0 chr17 5743374 5743396 -79695084 + (TTCA)n Simple_repeat Simple_repeat 4 25 0 2482 193 107 4 chr17 5743396 5743492 -79694988 - MLT1F1 LTR MaLR -481 86 1 353 282 147 29 chr17 5743492 5743540 -79694940 - MIR SINE MIR -218 44 3 290 317 138 17 chr17 5743952 5744311 -79694169 + L2 LINE L2 2644 3043 -229 189 0 0 0 chr17 5745580 5745601 -79692879 + (T)n Simple_repeat Simple_repeat 1 21 0 581 256 93 6 chr17 5745849 5746021 -79692459 - LTR33A LTR ERVL -40 483 297 208 316 26 0 chr17 5746240 5746316 -79692164 - L2 LINE L2 -633 2681 2604 767 230 7 0 chr17 5746322 5746474 -79692006 - MLT1E LTR MaLR -8 585 433 448 191 101 0 chr17 5746531 5746620 -79691860 - MLT1E1 LTR MaLR -556 98 1 360 165 24 24 chr17 5746620 5746705 -79691775 - L2 LINE L2 -704 2610 2526 2238 113 0 3 chr17 5747331 5747624 -79690856 - AluSq SINE Alu -17 296 5 375 325 132 8 chr17 5747729 5747845 -79690635 - L2 LINE L2 -337 2977 2877 2025 127 0 17 chr17 5747845 5748145 -79690335 + AluSq SINE Alu 1 295 -18 375 325 132 8 chr17 5748145 5748271 -79690209 - L2 LINE L2 -437 2877 2705 2402 90 0 3 chr17 5749395 5749695 -79688785 - AluSx SINE Alu -13 299 1 380 222 32 56 chr17 5749751 5749774 -79688706 - MIR SINE MIR -131 131 109 2068 211 132 9 chr17 5749774 5750304 -79688176 + MLT1G1 LTR MaLR 1 595 0 380 222 32 56 chr17 5750304 5750406 -79688074 - MIR SINE MIR -153 109 9 183 231 58 0 chr17 5750407 5750459 -79688021 + MIR SINE MIR 194 248 -14 241 317 0 0 chr17 5751248 5751308 -79687172 + (TCTA)n Simple_repeat Simple_repeat 2 61 0 639 251 112 27 chr17 5751315 5751538 -79686942 + MIR SINE MIR 1 242 -20 2046 142 0 40 chr17 5751745 5752068 -79686412 - AluSx SINE Alu -2 310 1 191 233 194 0 chr17 5752135 5752238 -79686242 - MIR SINE MIR -69 193 71 2288 116 0 0 chr17 5752869 5753170 -79685310 - AluSx SINE Alu -11 301 1 2392 97 3 0 chr17 5753405 5753705 -79684775 - AluSp SINE Alu -12 301 1 1438 217 32 32 chr17 5753734 5754075 -79684405 - MER58B DNA MER1_type 0 341 1 1444 43 0 32 chr17 5754452 5754639 -79683841 - L1PA8 LINE L1 -400 5772 5592 2871 71 15 18 chr17 5754639 5755030 -79683450 + L1PA8 LINE L1 5779 6170 -2 24 32 0 0 chr17 5755824 5755855 -79682625 + AT_rich Low_complexity Low_complexity 1 31 0 649 305 102 24 chr17 5756094 5756514 -79681966 + MLT1K LTR MaLR 101 553 -35 207 0 0 0 chr17 5756975 5756998 -79681482 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 248 77 26 0 chr17 5757279 5757318 -79681162 + (TTCC)n Simple_repeat Simple_repeat 3 42 0 8224 194 33 26 chr17 5757328 5759560 -79678920 - L1MC1 LINE L1 -7 6326 4111 2424 61 3 14 chr17 5759560 5759857 -79678623 - AluY SINE Alu -17 294 1 8224 194 33 26 chr17 5759857 5760153 -79678327 - L1MC1 LINE L1 -2222 4111 3819 2488 62 7 7 chr17 5760153 5760460 -79678020 - AluY SINE Alu -4 307 1 8224 194 33 26 chr17 5760460 5761086 -79677394 - L1MC1 LINE L1 -2514 3819 3153 2398 212 11 6 chr17 5761354 5761902 -79676578 + L1 LINE L1 4242 4792 -1354 22 70 0 0 chr17 5761924 5761967 -79676513 + AT_rich Low_complexity Low_complexity 1 43 0 4801 79 5 2 chr17 5761967 5762603 -79675877 - L1PB1 LINE L1 0 6151 5514 394 223 90 42 chr17 5762605 5762771 -79675709 - MLT1D LTR MaLR -219 286 113 916 197 112 5 chr17 5762838 5763017 -79675463 + MSTA LTR MaLR 1 202 -226 1971 98 52 38 chr17 5763017 5763304 -79675176 + AluSx SINE Alu 1 291 -21 2445 102 0 0 chr17 5763314 5763656 -79674824 - L1P LINE L1 -3154 2992 2651 4416 33 0 0 chr17 5763656 5764167 -79674313 + L1PA7 LINE L1 5642 6154 0 1228 159 100 9 chr17 5764171 5764391 -79674089 + MSTA LTR MaLR 187 426 -2 936 203 95 0 chr17 5764411 5764652 -79673828 + L1MA4 LINE L1 6036 6299 -1 1869 137 48 0 chr17 5764684 5764976 -79673504 + AluSp SINE Alu 1 306 -7 2298 118 0 9 chr17 5765714 5766029 -79672451 + AluSx SINE Alu 1 312 0 1919 233 99 8 chr17 5767723 5768229 -79670251 - MLT1H1 LTR MaLR 0 555 4 307 293 47 0 chr17 5768356 5768462 -79670018 + MIR SINE MIR 118 228 -34 305 200 128 124 chr17 5768552 5768802 -79669678 - MER112 DNA MER1_type -9 251 1 257 185 46 169 chr17 5769567 5769762 -79668718 + MLT1K LTR MaLR 408 578 -10 505 239 104 54 chr17 5770778 5771000 -79667480 + MER112 DNA MER1_type 3 235 -25 320 325 62 44 chr17 5771058 5771475 -79667005 - L2 LINE L2 -218 3054 2623 231 280 40 103 chr17 5771526 5771701 -79666779 - MER91A DNA MER1_type -32 164 1 207 303 71 10 chr17 5773114 5773213 -79665267 - MIR SINE MIR -130 132 28 1705 193 58 28 chr17 5774311 5774552 -79663928 + MLT1C LTR MaLR 22 281 -186 1668 102 0 4 chr17 5774552 5774777 -79663703 + AluSq SINE Alu 86 309 -4 1705 193 58 28 chr17 5774777 5774928 -79663552 + MLT1C LTR MaLR 281 426 -41 2269 95 6 25 chr17 5775620 5775935 -79662545 - AluSx SINE Alu -1 311 3 1415 218 51 9 chr17 5776753 5777069 -79661411 + Charlie1a DNA MER1_type 14 342 -1113 2033 67 0 0 chr17 5777085 5777355 -79661125 + AluY SINE Alu 44 313 0 1481 213 45 3 chr17 5777355 5777669 -79660811 - Charlie1a DNA MER1_type -1115 340 14 4380 185 102 18 chr17 5778066 5779107 -79659373 + Charlie1a DNA MER1_type 327 1454 -1 2001 137 42 70 chr17 5779476 5779642 -79658838 + MLT1B LTR MaLR 1 170 -220 2561 65 0 3 chr17 5779642 5779949 -79658531 + AluY SINE Alu 1 306 -5 2001 137 42 70 chr17 5779949 5780183 -79658297 + MLT1B LTR MaLR 170 390 0 1242 200 19 0 chr17 5780517 5780777 -79657703 + MER33 DNA MER1_type 1 265 -59 5277 147 39 4 chr17 5780782 5781814 -79656666 + L1PA8 LINE L1 5111 6174 0 2237 124 8 39 chr17 5781814 5782068 -79656412 + L1PA16 LINE L1 5778 6017 -149 2099 170 75 12 chr17 5782068 5782467 -79656013 + MSTB LTR MaLR 3 426 0 2237 124 8 39 chr17 5782467 5782599 -79655881 + L1PA16 LINE L1 6017 6152 -14 2373 69 0 39 chr17 5783059 5783365 -79655115 - AluYa5 SINE Alu -16 295 2 892 247 11 0 chr17 5783493 5783679 -79654801 + MER5A DNA MER1_type 1 188 -1 884 45 18 0 chr17 5783992 5784104 -79654376 + L1PA5 LINE L1 6039 6152 -2 290 186 29 20 chr17 5784426 5784528 -79653952 + CT-rich Low_complexity Low_complexity 2 104 0 329 250 12 12 chr17 5784579 5784663 -79653817 - MIR SINE MIR -21 241 158 546 206 66 0 chr17 5784767 5784900 -79653580 - MIR SINE MIR -52 156 17 1534 197 14 17 chr17 5785300 5785661 -79652819 + L1P LINE L1 4984 5343 -803 3231 233 36 17 chr17 5786169 5787075 -79651405 - L1ME1 LINE L1 -61 6900 5986 915 138 22 2 chr17 5787075 5787235 -79651245 + L1PB1 LINE L1 5989 6154 0 2451 253 95 29 chr17 5787249 5788685 -79649795 - L1ME1 LINE L1 -954 5987 4387 1312 233 75 30 chr17 5788710 5789233 -79649247 - L1ME1 LINE L1 -3526 3415 2897 6761 244 30 22 chr17 5789680 5790064 -79648416 - L1ME1 LINE L1 -4176 2946 2566 2001 98 4 4 chr17 5790064 5790330 -79648150 - AluSc SINE Alu -13 296 31 6761 244 30 22 chr17 5790330 5792683 -79645797 - L1ME1 LINE L1 -4556 2566 1 1416 224 139 91 chr17 5792781 5793299 -79645181 - MLT1G1 LTR MaLR 0 595 53 1435 172 0 48 chr17 5793300 5793403 -79645077 + AluJb SINE Alu 37 143 -169 1990 114 31 0 chr17 5793403 5793693 -79644787 + AluSq SINE Alu 1 299 -14 596 38 13 0 chr17 5793693 5793772 -79644708 + (TCTA)n Simple_repeat Simple_repeat 4 83 0 1435 172 0 48 chr17 5793772 5793957 -79644523 + AluJb SINE Alu 141 312 0 344 127 16 32 chr17 5793965 5794028 -79644452 - MLT1G1 LTR MaLR -533 62 1 679 296 22 30 chr17 5794327 5794557 -79643923 + MIR SINE MIR 28 255 -7 2107 101 0 3 chr17 5794558 5794846 -79643634 - AluSx SINE Alu -12 300 14 188 387 54 0 chr17 5795103 5795196 -79643284 - MIR SINE MIR -128 134 37 1141 124 0 17 chr17 5795555 5795733 -79642747 - AluSg/x SINE Alu -1 311 137 2331 60 0 3 chr17 5796167 5796478 -79642002 + AluSp SINE Alu 1 310 0 261 326 45 0 chr17 5796872 5796961 -79641519 + MIR SINE MIR 47 139 -69 2862 141 22 13 chr17 5797681 5797786 -79640694 + LTR24 LTR ERV1 10 113 -354 2158 95 24 0 chr17 5797786 5798081 -79640399 - AluSp SINE Alu -11 302 1 2862 141 22 13 chr17 5798081 5798429 -79640051 + LTR24 LTR ERV1 113 467 0 387 276 55 31 chr17 5798449 5798612 -79639868 - L1ME3 LINE L1 -1 6161 5995 321 130 0 0 chr17 5798613 5798659 -79639821 - L1PA5 LINE L1 -202 5952 5907 * 1751 76 25 4 chr17 5798632 5798869 -79639611 + L1PA4 LINE L1 5914 6155 0 264 240 39 19 chr17 5799378 5799482 -79638998 - L1ME3 LINE L1 -58 6104 5999 2204 84 19 0 chr17 5799719 5800109 -79638371 - L1M3 LINE L1 -581 5602 5201 1508 71 0 15 chr17 5800109 5800305 -79638175 + L1PA8 LINE L1 5973 6166 -6 798 188 17 33 chr17 5800308 5800489 -79637991 - L1MC3 LINE L1 -6 7779 7602 * 3995 189 38 6 chr17 5800488 5800934 -79637546 - L1MC3 LINE L1 -457 7328 6845 252 0 0 0 chr17 5800934 5800962 -79637518 + (TG)n Simple_repeat Simple_repeat 2 29 0 3995 189 38 6 chr17 5800962 5801296 -79637184 - L1MC3 LINE L1 -940 6845 6523 588 136 48 0 chr17 5801321 5801424 -79637056 + FRAM SINE Alu 69 176 0 319 148 0 0 chr17 5801428 5801482 -79636998 - L1MC3 LINE L1 -1635 6150 6097 2615 193 105 15 chr17 5801486 5801843 -79636637 - L1MC3 LINE L1 -1265 6520 6197 2084 106 3 3 chr17 5801843 5802135 -79636345 - AluSx SINE Alu -20 292 1 2615 193 105 15 chr17 5802135 5802166 -79636314 - L1MC3 LINE L1 -1588 6197 6170 1458 186 29 11 chr17 5802166 5802440 -79636040 + AluJo SINE Alu 1 279 -33 2615 193 105 15 chr17 5802440 5802728 -79635752 - L1MC3 LINE L1 -1615 6170 5782 2470 173 22 88 chr17 5802737 5802959 -79635521 - MER44D DNA MER2_type -1890 597 362 2051 93 3 45 chr17 5802959 5803270 -79635210 - AluY SINE Alu -13 298 1 2470 173 22 88 chr17 5803270 5803625 -79634855 - MER44D DNA MER2_type -2125 362 3 849 141 4 40 chr17 5803626 5803808 -79634672 - L1MC3 LINE L1 -560 5784 5606 2193 100 0 6 chr17 5803816 5804127 -79634353 + AluSq SINE Alu 5 313 0 5610 243 31 47 chr17 5804135 5804712 -79633768 - L1MC3 LINE L1 -8 7777 7193 2099 124 0 0 chr17 5804712 5805019 -79633461 - AluSx SINE Alu -5 307 1 5610 243 31 47 chr17 5805019 5806193 -79632287 - L1MC3 LINE L1 -592 7193 6053 771 250 72 19 chr17 5806210 5806474 -79632006 - L1ME3A LINE L1 -229 5941 5664 315 283 142 25 chr17 5806513 5806633 -79631847 - L1MEd LINE L1 -5967 152 19 188 353 25 49 chr17 5806706 5806828 -79631652 - MIR3 SINE MIR -75 133 15 224 303 0 15 chr17 5807053 5807119 -79631361 + GA-rich Low_complexity Low_complexity 1 65 0 664 311 78 91 chr17 5809074 5809181 -79629299 + L1M4 LINE L1 2142 2249 -3897 2126 103 7 3 chr17 5809181 5809483 -79628997 + AluSx SINE Alu 1 303 -9 664 311 78 91 chr17 5809483 5810179 -79628301 + L1M4 LINE L1 2249 2935 -3211 2029 71 0 15 chr17 5810192 5810459 -79628021 + AluY SINE Alu 1 263 -48 186 43 0 0 chr17 5810468 5810491 -79627989 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 2072 129 0 0 chr17 5810515 5810809 -79627671 + AluSx SINE Alu 1 294 -18 711 325 57 61 chr17 5810813 5811238 -79627242 + L1M4 LINE L1 2956 3378 -2768 280 309 135 39 chr17 5811350 5811415 -79627065 + L2 LINE L2 922 979 -2335 2231 77 3 3 chr17 5811415 5811713 -79626767 - AluY SINE Alu -13 298 1 280 309 135 39 chr17 5811713 5811906 -79626574 + L2 LINE L2 979 1205 -2109 1572 224 132 50 chr17 5812073 5812574 -79625906 + MLT1F LTR MaLR 1 542 0 225 0 0 0 chr17 5812844 5812869 -79625611 + (TG)n Simple_repeat Simple_repeat 2 26 0 452 314 32 11 chr17 5812880 5813068 -79625412 - L1MC4 LINE L1 -130 7912 7721 714 179 0 0 chr17 5813504 5813621 -79624859 - AluJb SINE Alu -194 118 2 1107 228 104 31 chr17 5813760 5814146 -79624334 - L1MC4 LINE L1 -466 7576 7163 22 0 0 0 chr17 5814770 5814792 -79623688 + AT_rich Low_complexity Low_complexity 1 22 0 531 239 18 0 chr17 5815302 5815411 -79623069 - MER81 DNA DNA -3 111 1 201 74 0 0 chr17 5815685 5815712 -79622768 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 188 299 69 11 chr17 5815714 5815801 -79622679 + L2 LINE L2 1874 1965 -1349 383 259 36 67 chr17 5815803 5816027 -79622453 + L1M4 LINE L1 4229 4445 -1701 856 217 28 0 chr17 5816047 5816227 -79622253 - MER5A DNA MER1_type -4 185 1 461 309 130 30 chr17 5816274 5816743 -79621737 + L2 LINE L2 1982 2497 -817 422 304 8 16 chr17 5817318 5817443 -79621037 + MIR3 SINE MIR 82 205 -3 207 0 0 0 chr17 5817819 5817842 -79620638 + (CA)n Simple_repeat Simple_repeat 2 24 0 1929 212 28 42 chr17 5818129 5818323 -79620157 - L1ME2 LINE L1 -108 6056 5861 1924 131 3 13 chr17 5818323 5818629 -79619851 + AluSq SINE Alu 3 305 -8 1929 212 28 42 chr17 5818629 5818935 -79619545 - L1ME2 LINE L1 -303 5861 5563 199 279 295 23 chr17 5819472 5819601 -79618879 - MIR3 SINE MIR -29 179 16 3558 128 60 15 chr17 5819732 5820316 -79618164 - LTR31 LTR ERV1 -9 610 1 844 171 0 0 chr17 5821448 5821588 -79616892 - LTR31 LTR ERV1 -111 508 369 196 318 30 0 chr17 5822692 5822758 -79615722 - MIR3 SINE MIR -24 184 117 547 209 62 16 chr17 5823359 5823488 -79614992 - Tigger1 DNA MER2_type 0 2418 2284 2648 244 105 45 chr17 5823488 5824576 -79613904 - L1ME3 LINE L1 -275 5887 4866 180 0 0 0 chr17 5824576 5824596 -79613884 + (TTAA)n Simple_repeat Simple_repeat 3 22 0 2648 244 105 45 chr17 5824596 5824635 -79613845 - L1ME3 LINE L1 -1296 4866 4831 2770 10 0 0 chr17 5824635 5824946 -79613534 - AluYa5 SINE Alu 0 311 1 2648 244 105 45 chr17 5824946 5825652 -79612828 - L1ME3 LINE L1 -1331 4831 3923 1931 125 11 0 chr17 5825652 5825973 -79612507 + AluSx SINE Alu 1 324 0 2648 244 105 45 chr17 5825973 5826040 -79612440 - L1ME3 LINE L1 -2239 3923 3861 2115 109 3 13 chr17 5826972 5827259 -79611221 + AluSg SINE Alu 1 286 -24 207 0 0 0 chr17 5827259 5827282 -79611198 + (TTAA)n Simple_repeat Simple_repeat 1 23 0 2115 109 3 13 chr17 5827282 5827307 -79611173 + AluSg SINE Alu 286 310 0 420 20 0 0 chr17 5828233 5828282 -79610198 + (TG)n Simple_repeat Simple_repeat 1 49 0 243 61 0 0 chr17 5828282 5828315 -79610165 + (TGG)n Simple_repeat Simple_repeat 3 35 0 289 309 90 51 chr17 5828315 5828626 -79609854 - L2 LINE L2 -337 2977 2655 275 275 297 0 chr17 5828602 5828666 -79609814 + MER5A DNA MER1_type 11 55 -134 * 2614 81 23 3 chr17 5828666 5829014 -79609466 - THE1A LTR MaLR 0 355 1 275 275 297 0 chr17 5829014 5829087 -79609393 + MER5A DNA MER1_type 55 189 0 213 362 26 9 chr17 5829116 5829232 -79609248 - L2 LINE L2 -639 2675 2558 276 233 93 35 chr17 5830353 5830439 -79608041 - L2 LINE L2 -40 3232 3142 225 298 54 127 chr17 5830798 5831184 -79607296 - L2 LINE L2 -94 3178 2821 193 332 142 40 chr17 5831717 5831970 -79606510 - L2 LINE L2 -99 3173 2895 644 204 0 0 chr17 5831999 5832112 -79606368 + Charlie3 DNA MER1_type 1 113 -2597 1962 126 0 16 chr17 5832112 5832429 -79606051 - AluSx SINE Alu 0 312 1 1651 274 88 32 chr17 5832440 5832791 -79605689 - L2 LINE L2 -243 3070 2740 2092 107 24 0 chr17 5832791 5833081 -79605399 + AluSx SINE Alu 1 297 -15 1651 274 88 32 chr17 5833081 5833438 -79605042 - L2 LINE L2 -573 2740 2316 643 290 71 25 chr17 5833773 5833914 -79604566 + MIR SINE MIR 4 162 -100 1317 145 114 77 chr17 5833914 5834266 -79604214 - MLT1A1 LTR MaLR 0 365 1 643 290 71 25 chr17 5834266 5834362 -79604118 + MIR SINE MIR 162 252 -10 2058 121 3 0 chr17 5834393 5834690 -79603790 - AluSq SINE Alu -15 298 1 376 236 13 66 chr17 5835429 5835586 -79602894 + MIR SINE MIR 2 147 -65 1786 170 61 86 chr17 5836081 5836331 -79602149 - MSTB LTR MaLR -7 419 183 2196 101 0 3 chr17 5836331 5836628 -79601852 - AluSx SINE Alu -16 296 1 1786 170 61 86 chr17 5836628 5836806 -79601674 - MSTB LTR MaLR -243 183 2 213 220 51 17 chr17 5837291 5837350 -79601130 - MIR SINE MIR -109 153 93 584 317 58 24 chr17 5838126 5838331 -79600149 - MIR SINE MIR -23 239 28 1894 112 0 0 chr17 5838363 5838631 -79599849 - AluSc SINE Alu 0 309 42 209 238 16 48 chr17 5838974 5839037 -79599443 - L2 LINE L2 -80 3192 3132 1579 225 71 88 chr17 5839179 5839744 -79598736 + MER68 LTR ERV1 2 556 -6 235 316 125 45 chr17 5839753 5840135 -79598345 - L2 LINE L2 -264 3008 2597 1254 151 18 18 chr17 5840370 5840588 -79597892 + MER20 DNA MER1_type 1 218 -1 850 194 15 63 chr17 5840598 5840804 -79597676 + MER3 DNA MER1_type 2 197 -12 534 299 0 7 chr17 5841520 5841667 -79596813 - MIR SINE MIR -95 167 22 2208 116 0 0 chr17 5841668 5841966 -79596514 - AluSx SINE Alu -28 284 1 749 226 26 15 chr17 5842594 5842789 -79595691 - MER117 DNA MER1_type 0 197 1 361 217 11 22 chr17 5842981 5843073 -79595407 - L3 LINE CR1 -97 1480 1390 2462 88 0 0 chr17 5843239 5843545 -79594935 + AluY SINE Alu 1 306 -5 324 250 105 24 chr17 5843586 5843710 -79594770 - L3 LINE CR1 -197 1380 1247 328 275 0 55 chr17 5843916 5844025 -79594455 - L2 LINE L2 -1 3271 3169 306 253 0 58 chr17 5844305 5844343 -79594137 - L1MC4 LINE L1 -1349 6693 6654 1932 114 3 50 chr17 5844343 5844670 -79593810 - AluSx SINE Alu 0 313 1 306 253 0 58 chr17 5844670 5844717 -79593763 - L1MC4 LINE L1 -1388 6654 6612 300 256 67 44 chr17 5844674 5844764 -79593716 + L1MC4 LINE L1 6614 6705 -1337 * 235 101 13 51 chr17 5844769 5844848 -79593632 + (TA)n Simple_repeat Simple_repeat 2 77 0 2233 167 38 38 chr17 5844850 5845353 -79593127 - L1MB4 LINE L1 -33 6147 5645 1765 176 38 32 chr17 5845417 5845801 -79592679 + MLT1B LTR MaLR 1 420 -8 21 0 0 0 chr17 5845863 5845884 -79592596 + AT_rich Low_complexity Low_complexity 1 21 0 794 173 0 0 chr17 5845933 5846066 -79592414 - FLAM_C SINE Alu 0 133 1 511 289 128 22 chr17 5846254 5846614 -79591866 - L1M4 LINE L1 -1242 4904 4507 22 0 0 0 chr17 5846630 5846652 -79591828 + AT_rich Low_complexity Low_complexity 1 22 0 721 315 43 40 chr17 5846834 5847055 -79591425 - L2 LINE L2 -567 2747 2523 2208 83 35 3 chr17 5847055 5847343 -79591137 + AluSg1 SINE Alu 1 297 -12 721 315 43 40 chr17 5847343 5847470 -79591010 - L2 LINE L2 -791 2523 2398 725 126 0 0 chr17 5848472 5848591 -79589889 + AluSg/x SINE Alu 193 311 -1 2225 116 7 3 chr17 5849790 5850092 -79588388 - AluSg SINE Alu -7 303 1 401 66 16 0 chr17 5850143 5850204 -79588276 + (GA)n Simple_repeat Simple_repeat 2 63 0 604 281 38 19 chr17 5850527 5850737 -79587743 - MIR SINE MIR -3 259 46 461 243 215 0 chr17 5850916 5851060 -79587420 - MER45A DNA AcHobo 0 178 4 946 140 21 0 chr17 5851407 5851574 -79586906 - AluSg/x SINE Alu 0 304 135 271 376 0 32 chr17 5852444 5852630 -79585850 + (TG)n Simple_repeat Simple_repeat 1 180 0 * 282 294 39 0 chr17 5852543 5852645 -79585835 + (TATATG)n Simple_repeat Simple_repeat 2 107 0 2029 123 34 3 chr17 5852724 5853016 -79585464 + AluSx SINE Alu 1 301 -11 303 242 78 47 chr17 5854726 5854854 -79583626 - L2 LINE L2 -7 3265 3134 246 183 0 0 chr17 5854990 5855047 -79583433 - MIR SINE MIR -65 143 96 393 22 0 0 chr17 5855124 5855170 -79583310 + (TG)n Simple_repeat Simple_repeat 2 47 0 2146 90 0 4 chr17 5855170 5855437 -79583043 - AluSq SINE Alu -26 287 22 527 261 55 12 chr17 5856036 5856201 -79582279 + MIR SINE MIR 47 218 -44 2459 56 0 0 chr17 5856513 5856885 -79581595 + AluY SINE Alu 1 372 0 1428 229 8 43 chr17 5857760 5858008 -79580472 + L1MD3 LINE L1 7634 7866 -129 2064 149 0 0 chr17 5858008 5858297 -79580183 + AluSx SINE Alu 1 289 -23 1428 229 8 43 chr17 5858297 5858420 -79580060 + L1MD3 LINE L1 7866 7992 -3 347 329 87 0 chr17 5859089 5859238 -79579242 - MIR3 SINE MIR -30 178 17 288 266 133 90 chr17 5860080 5860358 -79578122 - L2 LINE L2 -2 3311 3022 182 372 0 39 chr17 5860383 5860461 -79578019 + L3 LINE CR1 398 472 -1105 * 332 341 66 24 chr17 5860456 5860623 -79577857 - MIR SINE MIR 0 262 89 302 302 145 17 chr17 5860703 5860875 -79577605 + L3 LINE CR1 473 666 -911 356 318 55 28 chr17 5860920 5861137 -79577343 + L2 LINE L2 2836 3058 -214 384 40 0 0 chr17 5861178 5861228 -79577252 + (TCTA)n Simple_repeat Simple_repeat 3 52 0 539 267 136 30 chr17 5861230 5861742 -79576738 + MLT1L LTR MaLR 10 615 0 180 354 154 15 chr17 5861777 5861907 -79576573 + L2 LINE L2 3124 3271 -1 603 244 60 0 chr17 5862825 5862993 -79575487 + MER45A DNA AcHobo 1 178 0 366 23 0 0 chr17 5863728 5863771 -79574709 + (TG)n Simple_repeat Simple_repeat 1 43 0 207 0 0 0 chr17 5863770 5863793 -79574687 + (GA)n Simple_repeat Simple_repeat 1 23 0 * 377 39 20 0 chr17 5864116 5864167 -79574313 + (TG)n Simple_repeat Simple_repeat 2 53 0 216 0 0 0 chr17 5864495 5864519 -79573961 + (TG)n Simple_repeat Simple_repeat 2 25 0 22 94 0 0 chr17 5864585 5864649 -79573831 + GC_rich Low_complexity Low_complexity 1 64 0 22 56 0 0 chr17 5864673 5864709 -79573771 + GC_rich Low_complexity Low_complexity 1 36 0 228 75 38 38 chr17 5864731 5864784 -79573696 + (CCCG)n Simple_repeat Simple_repeat 2 54 0 231 245 9 38 chr17 5865155 5865261 -79573219 + G-rich Low_complexity Low_complexity 2 104 0 2087 151 3 6 chr17 5867694 5868006 -79570474 + AluSx SINE Alu 1 311 -1 318 299 19 0 chr17 5868242 5868349 -79570131 + MIR SINE MIR 78 186 -76 310 340 70 19 chr17 5870480 5870695 -79567785 + MIR SINE MIR 29 254 -8 241 286 103 40 chr17 5871243 5871369 -79567111 - L2 LINE L2 -1 3271 3138 2378 98 3 0 chr17 5871443 5871740 -79566740 - AluSc SINE Alu -11 298 1 422 370 65 27 chr17 5872533 5872871 -79565609 - L2 LINE L2 0 3272 2922 288 170 0 0 chr17 5872917 5872970 -79565510 + (TG)n Simple_repeat Simple_repeat 1 53 0 551 291 56 39 chr17 5872982 5873216 -79565264 - L2 LINE L2 -451 2863 2626 604 290 50 23 chr17 5874186 5874407 -79564073 + MIR SINE MIR 13 239 -23 567 264 63 6 chr17 5874466 5874625 -79563855 - MIR SINE MIR -71 191 24 22 42 0 0 chr17 5875310 5875334 -79563146 + GC_rich Low_complexity Low_complexity 1 24 0 2208 107 20 3 chr17 5875804 5876102 -79562378 + AluSx SINE Alu 1 303 -9 692 221 28 17 chr17 5876198 5876379 -79562101 + MER5A DNA MER1_type 2 184 -5 321 197 13 26 chr17 5876495 5876571 -79561909 - MIR SINE MIR -102 160 86 974 208 36 5 chr17 5876574 5876795 -79561685 - LTR16C LTR ERVL -2 489 262 210 353 69 28 chr17 5877097 5877315 -79561165 - L2 LINE L2 -429 2885 2659 281 167 45 30 chr17 5877860 5877926 -79560554 - AluS SINE Alu -237 71 5 897 73 0 9 chr17 5877927 5878036 -79560444 + AluSx SINE Alu 46 153 -159 2277 109 3 0 chr17 5878161 5878465 -79560015 - AluSq SINE Alu -5 308 4 1493 109 37 251 chr17 5878470 5878857 -79559623 + Tigger3(Golem) DNA MER2_type 2497 2679 -350 2376 70 0 10 chr17 5878857 5879157 -79559323 - AluY SINE Alu -14 297 1 1493 109 37 251 chr17 5879157 5879446 -79559034 + Tigger3(Golem) DNA MER2_type 2679 3028 -1 435 309 94 43 chr17 5879508 5879829 -79558651 - L1MDa LINE L1 -3936 2604 2355 1092 215 0 0 chr17 5880087 5880282 -79558198 - MLT1A1 LTR MaLR -2 363 169 333 250 0 0 chr17 5880272 5880340 -79558140 - MLT1A1 LTR MaLR -129 236 169 * 333 250 0 0 chr17 5880330 5880398 -79558082 - MLT1A1 LTR MaLR -129 236 169 * 1314 153 49 5 chr17 5880388 5880611 -79557869 - MLT1A1 LTR MaLR -129 236 4 206 290 138 21 chr17 5880805 5880950 -79557530 - L3 LINE CR1 -108 1469 1308 387 295 12 66 chr17 5881771 5881937 -79556543 + MIR3 SINE MIR 33 189 -19 2634 65 0 0 chr17 5882164 5882471 -79556009 - AluY SINE Alu -4 307 1 237 109 0 43 chr17 5882512 5882558 -79555922 - MIR SINE MIR -102 160 117 315 322 48 7 chr17 5882625 5882771 -79555709 - MIR SINE MIR -99 163 12 435 197 0 0 chr17 5883033 5883109 -79555371 - MER63 DNA MER1_type -84 752 677 593 273 163 22 chr17 5883621 5883984 -79554496 + L2 LINE L2 2899 3312 -1 301 310 56 56 chr17 5884080 5884293 -79554187 + MIR SINE MIR 27 239 -23 683 205 0 18 chr17 5884609 5884775 -79553705 - L1MB5 LINE L1 0 6174 6012 984 181 78 21 chr17 5884790 5885033 -79553447 - L1MD3 LINE L1 -9 7986 7730 499 328 104 27 chr17 5885342 5885717 -79552763 - MLT1I LTR MaLR -1 408 5 2202 107 7 3 chr17 5886089 5886388 -79552092 - AluSc SINE Alu -9 300 1 789 263 109 63 chr17 5886437 5886851 -79551629 + MLT1D LTR MaLR 1 433 -72 254 301 21 11 chr17 5887313 5887406 -79551074 + MIR SINE MIR 30 123 -85 21 0 0 0 chr17 5887643 5887664 -79550816 + AT_rich Low_complexity Low_complexity 1 21 0 2206 119 0 0 chr17 5887747 5888040 -79550440 - AluSx SINE Alu -19 293 1 254 301 42 42 chr17 5888049 5888192 -79550288 + L2 LINE L2 3169 3311 -2 1641 260 47 57 chr17 5888912 5889511 -79548969 - MLT1E LTR MaLR 0 593 1 198 71 0 0 chr17 5890432 5890460 -79548020 + (TC)n Simple_repeat Simple_repeat 1 28 0 1177 130 5 31 chr17 5891581 5891755 -79546725 - AluJb SINE Alu -4 308 138 2140 133 0 3 chr17 5891755 5892049 -79546431 - AluSx SINE Alu -19 293 1 1177 130 5 31 chr17 5892049 5892066 -79546414 - AluJb SINE Alu -174 138 122 321 232 12 49 chr17 5892171 5892253 -79546227 - L1MC4 LINE L1 -1355 6687 6609 441 282 44 92 chr17 5892612 5892735 -79545745 - L1ME LINE L1 -342 5779 5652 2311 97 13 7 chr17 5892735 5893043 -79545437 - AluSg SINE Alu 0 310 1 441 282 44 92 chr17 5893043 5893280 -79545200 - L1ME LINE L1 -469 5652 5434 545 284 38 48 chr17 5894037 5894136 -79544344 - MIR SINE MIR -3 259 160 2185 113 0 13 chr17 5894136 5894437 -79544043 - AluSq SINE Alu -16 297 1 545 284 38 48 chr17 5894437 5894595 -79543885 - MIR SINE MIR -102 160 5 554 319 28 66 chr17 5895092 5895412 -79543068 + L2 LINE L2 2932 3239 -33 1242 109 0 40 chr17 5895421 5895596 -79542884 + AluSx SINE Alu 1 168 -144 493 298 4 8 chr17 5895696 5895931 -79542549 - AluSq SINE Alu -77 236 3 1778 142 0 77 chr17 5896001 5896324 -79542156 - AluSx SINE Alu -12 300 3 356 377 63 6 chr17 5896616 5896791 -79541689 - HAL1 LINE L1 -710 1797 1613 1937 142 48 0 chr17 5897270 5897565 -79540915 + AluSc SINE Alu 1 309 0 211 289 96 0 chr17 5897938 5898021 -79540459 - L2 LINE L2 0 3272 3182 412 266 49 21 chr17 5898031 5898174 -79540306 + MIR3 SINE MIR 4 150 -58 395 237 105 48 chr17 5898226 5898452 -79540028 - MIR SINE MIR -2 260 19 2179 136 0 0 chr17 5898479 5898788 -79539692 - AluSx SINE Alu 0 312 4 323 349 71 0 chr17 5899190 5899316 -79539164 - MIR3 SINE MIR -25 183 49 938 217 4 71 chr17 5899429 5899669 -79538811 - MER58A DNA MER1_type 0 224 1 376 341 82 22 chr17 5899723 5899905 -79538575 + L2 LINE L2 3079 3271 -1 513 182 0 0 chr17 5900252 5900351 -79538129 + (TG)n Simple_repeat Simple_repeat 2 100 0 798 166 0 45 chr17 5900363 5900520 -79537960 + MLT1B LTR MaLR 34 183 -207 747 176 36 24 chr17 5900501 5900666 -79537814 + MLT1B LTR MaLR 298 464 -3 * 2262 88 7 7 chr17 5901468 5901763 -79536717 + AluSg SINE Alu 5 299 -11 733 252 18 91 chr17 5902021 5902295 -79536185 + MIR SINE MIR 9 262 0 303 258 0 0 chr17 5902765 5902831 -79535649 - MIR SINE MIR -65 143 78 364 324 27 60 chr17 5903416 5903601 -79534879 + MIR3 SINE MIR 3 181 -27 268 356 11 0 chr17 5903952 5904039 -79534441 - L2 LINE L2 -64 3208 3121 312 294 117 22 chr17 5904879 5905059 -79533421 - LTR16A1 LTR ERVL -93 364 168 366 80 0 0 chr17 5906159 5906209 -79532271 + (TTCA)n Simple_repeat Simple_repeat 3 52 0 351 271 202 26 chr17 5906240 5906763 -79531717 - L2 LINE L2 -95 3218 2602 387 325 0 4 chr17 5907443 5907679 -79530801 + (CA)n Simple_repeat Simple_repeat 1 234 0 195 42 0 0 chr17 5908232 5908256 -79530224 + (TCCA)n Simple_repeat Simple_repeat 1 24 0 389 317 26 118 chr17 5909156 5909462 -79529018 - L2 LINE L2 -19 3253 2976 330 270 117 55 chr17 5909625 5909953 -79528527 + L1MC5 LINE L1 1958 8032 -209 24 53 0 0 chr17 5909966 5910004 -79528476 + AT_rich Low_complexity Low_complexity 1 38 0 310 293 40 67 chr17 5910445 5910698 -79527782 - L2 LINE L2 -1230 2084 1839 274 215 124 41 chr17 5911436 5911557 -79526923 + MLT1H LTR MaLR 408 538 -11 481 282 28 21 chr17 5912644 5912786 -79525694 + MIR SINE MIR 61 203 -59 235 118 0 0 chr17 5912789 5912823 -79525657 + MLT1L LTR MaLR 4 37 -578 474 279 61 92 chr17 5912866 5912936 -79525544 + MLT1J LTR MaLR 111 182 -329 1824 93 61 83 chr17 5912936 5913248 -79525232 + AluSq SINE Alu 1 305 -8 474 279 61 92 chr17 5913248 5913589 -79524891 + MLT1J LTR MaLR 182 509 -2 2184 119 3 7 chr17 5913707 5914017 -79524463 - AluSg SINE Alu -1 309 1 206 281 0 18 chr17 5914042 5914099 -79524381 - L2 LINE L2 -224 3048 2993 948 239 93 89 chr17 5914983 5915081 -79523399 - MLT1H1 LTR MaLR -10 545 449 2359 113 0 3 chr17 5915081 5915391 -79523089 + AluSq SINE Alu 1 309 -4 948 239 93 89 chr17 5915391 5915867 -79522613 - MLT1H1 LTR MaLR -106 449 1 224 319 43 21 chr17 5917229 5917323 -79521157 + MIR SINE MIR 157 252 -10 610 139 14 36 chr17 5919571 5919857 -79518623 + GA-rich Low_complexity Low_complexity 1 279 0 1080 210 47 0 chr17 5921114 5921328 -79517152 - MIR SINE MIR -12 250 27 205 216 39 0 chr17 5922237 5922288 -79516192 + GA-rich Low_complexity Low_complexity 4 56 0 731 303 138 24 chr17 5922527 5922867 -79515613 - L1MC4a LINE L1 -1908 5900 5522 1990 131 0 67 chr17 5922992 5923320 -79515160 - AluJo SINE Alu -6 306 1 256 189 98 82 chr17 5924164 5924286 -79514194 + LTR9 LTR ERV1 1 124 -488 1958 107 0 36 chr17 5924287 5924595 -79513885 + AluSc SINE Alu 1 297 -12 2242 177 46 13 chr17 5924598 5925056 -79513424 + LTR9B LTR ERV1 170 642 -2 1049 183 48 5 chr17 5925675 5925883 -79512597 - MER20 DNA MER1_type 0 219 3 516 187 90 8 chr17 5926274 5926408 -79512072 + L1ME4a LINE L1 5734 5878 -243 478 247 13 83 chr17 5927849 5928098 -79510382 - L1MC/D LINE L1 -385 5736 5565 386 350 19 31 chr17 5928123 5928283 -79510197 + MIR SINE MIR 28 185 -77 2351 134 39 17 chr17 5929028 5929438 -79509042 - MSTB LTR MaLR 0 426 8 242 272 177 44 chr17 5929439 5929597 -79508883 - MIR3 SINE MIR -27 181 3 684 241 70 10 chr17 5931105 5931304 -79507176 - L2 LINE L2 -222 3091 2881 1914 166 33 14 chr17 5931317 5931594 -79506886 - MLT1B LTR MaLR -16 374 87 2117 117 0 0 chr17 5931594 5931876 -79506604 + AluSx SINE Alu 23 304 -8 1914 166 33 14 chr17 5931876 5931965 -79506515 - MLT1B LTR MaLR -303 87 1 413 257 182 14 chr17 5932951 5933099 -79505381 - MIR SINE MIR -34 228 56 231 286 0 0 chr17 5934984 5935040 -79503440 + MIR SINE MIR 92 147 -61 236 179 0 0 chr17 5935385 5935424 -79503056 - MER5A DNA MER1_type 0 189 151 2333 192 11 45 chr17 5935478 5935771 -79502709 + L1MA5 LINE L1 1356 1621 -5168 2480 95 3 0 chr17 5935771 5936076 -79502404 + AluSq SINE Alu 1 306 -7 2333 192 11 45 chr17 5936076 5936356 -79502124 + L1MA5 LINE L1 1621 1909 -4880 230 217 0 0 chr17 5936356 5936402 -79502078 - L1M2c LINE L1 -4844 1945 1900 * 995 168 20 0 chr17 5936400 5936603 -79501877 + L1MA5 LINE L1 3600 3806 -2982 * 7454 130 22 36 chr17 5936583 5939017 -79499463 + L1MA5 LINE L1 4552 6940 -2 25 23 0 23 chr17 5939017 5939035 -79499445 + AT_rich Low_complexity Low_complexity 1 18 -24 2637 80 0 8 chr17 5939035 5939398 -79499082 - L1PA8 LINE L1 0 6172 5813 25 23 0 23 chr17 5939398 5939422 -79499058 + AT_rich Low_complexity Low_complexity 18 42 0 550 205 17 8 chr17 5939437 5939554 -79498926 - MER5A DNA MER1_type -63 126 9 2090 131 3 31 chr17 5939941 5940262 -79498218 - AluSx SINE Alu 0 312 1 213 39 0 0 chr17 5940769 5940795 -79497685 + (CA)n Simple_repeat Simple_repeat 1 26 0 280 298 177 56 chr17 5941308 5941523 -79496957 + L2 LINE L2 3029 3269 -3 267 247 26 26 chr17 5941880 5941957 -79496523 + MIR SINE MIR 56 132 -130 1547 204 34 55 chr17 5943206 5943588 -79494892 - MLT1A2 LTR MaLR 0 374 1 202 360 45 0 chr17 5943743 5943854 -79494626 - L2 LINE L2 -2 3270 3155 290 319 18 26 chr17 5944083 5944196 -79494284 + MIR SINE MIR 37 148 -114 227 245 138 21 chr17 5948325 5948419 -79490061 + MIR SINE MIR 49 153 -55 742 329 40 40 chr17 5948514 5948943 -79489537 + MLT1K LTR MaLR 138 566 -22 190 286 71 14 chr17 5949217 5949287 -79489193 - MIR SINE MIR -70 192 119 842 145 0 0 chr17 5949530 5949749 -79488731 - FLAM_C SINE Alu 0 219 1 403 310 103 17 chr17 5949755 5949797 -79488683 - MIR SINE MIR -56 206 169 1134 242 102 50 chr17 5949797 5950277 -79488203 + MLT1D LTR MaLR 1 505 0 403 310 103 17 chr17 5950277 5950408 -79488072 - MIR SINE MIR -93 169 18 686 296 4 48 chr17 5950440 5950670 -79487810 + MIR SINE MIR 33 252 -10 817 216 64 5 chr17 5950752 5950956 -79487524 - MER20 DNA MER1_type 0 219 4 329 340 31 13 chr17 5951187 5951211 -79487269 + MIR SINE MIR 100 122 -140 6489 60 33 1 chr17 5951211 5952137 -79486343 + L1PA8 LINE L1 5218 6171 -1 329 340 31 13 chr17 5952137 5952271 -79486209 + MIR SINE MIR 122 261 -1 299 250 9 56 chr17 5952745 5952853 -79485627 + MIR SINE MIR 20 122 -86 4531 58 15 5 chr17 5953227 5953835 -79484645 - L1PA7 LINE L1 -1 6153 5540 345 319 26 0 chr17 5953883 5953990 -79484490 - MIR SINE MIR -77 185 76 248 227 0 113 chr17 5953990 5954087 -79484393 + MER91B DNA MER1_type 1 86 -104 1655 205 43 57 chr17 5954569 5955076 -79483404 - MLT1D LTR MaLR -3 502 3 1968 130 3 7 chr17 5955791 5956075 -79482405 + AluSq SINE Alu 1 283 -30 243 0 0 0 chr17 5956078 5956105 -79482375 + (TAAA)n Simple_repeat Simple_repeat 3 29 0 241 294 17 84 chr17 5957420 5957539 -79480941 + MIR SINE MIR 46 156 -106 23 0 0 0 chr17 5958299 5958322 -79480158 + AT_rich Low_complexity Low_complexity 1 23 0 338 231 0 13 chr17 5958337 5958415 -79480065 + MIR3 SINE MIR 115 191 -17 2082 126 3 10 chr17 5958581 5958882 -79479598 + AluSx SINE Alu 1 299 -13 334 210 6 160 chr17 5960197 5960378 -79478102 + HAL1b LINE L1 1185 1337 -11 488 293 11 42 chr17 5961361 5961552 -79476928 - MIR SINE MIR -6 256 72 303 272 0 43 chr17 5961792 5961884 -79476596 - MLT1H LTR MaLR -415 134 47 187 299 72 31 chr17 5962588 5962685 -79475795 + MIR3 SINE MIR 105 205 -3 300 264 230 40 chr17 5963038 5963103 -79475377 + MER5A DNA MER1_type 13 64 -125 2103 121 10 20 chr17 5963103 5963408 -79475072 + AluSx SINE Alu 1 302 -10 300 264 230 40 chr17 5963408 5963490 -79474990 + MER5A DNA MER1_type 64 188 -1 318 268 91 81 chr17 5963493 5963691 -79474789 + LTR16C LTR ERVL 2 201 -290 2195 201 82 46 chr17 5963691 5964254 -79474226 - MER119 DNA MER1_type 0 583 1 497 258 129 17 chr17 5964279 5964519 -79473961 + LTR16C LTR ERVL 222 488 -3 189 291 103 0 chr17 5964547 5964664 -79473816 - L2 LINE L2 -673 2641 2513 239 324 67 9 chr17 5965276 5965381 -79473099 - MIR SINE MIR -70 192 82 * 261 293 204 16 chr17 5965365 5965488 -79472992 - L2 LINE L2 -4 3309 3210 1571 111 134 0 chr17 5965488 5965750 -79472730 + AluY SINE Alu 1 297 -4 261 293 204 16 chr17 5965750 5965817 -79472663 - L2 LINE L2 -103 3210 3083 1848 244 42 33 chr17 5967225 5967747 -79470733 - MER74B LTR ERVL -58 564 35 2583 84 5 22 chr17 5967747 5968117 -79470363 - THE1B LTR MaLR 0 364 1 1848 244 42 33 chr17 5968117 5968144 -79470336 - MER74B LTR ERVL -587 35 10 511 308 27 0 chr17 5968148 5968333 -79470147 + L2 LINE L2 2867 3056 -257 369 298 169 35 chr17 5968583 5969120 -79469360 + L2 LINE L2 2172 2780 -534 215 61 30 0 chr17 5970012 5970045 -79468435 + (TC)n Simple_repeat Simple_repeat 2 35 0 359 303 35 14 chr17 5970597 5970739 -79467741 - L3 LINE CR1 -86 1491 1347 556 296 38 32 chr17 5970884 5971070 -79467410 - MIR SINE MIR -3 259 73 196 354 53 18 chr17 5971242 5971355 -79467125 + L2 LINE L2 3122 3238 -34 301 317 57 16 chr17 5971519 5971642 -79466838 + MIR3 SINE MIR 6 133 -75 358 233 25 42 chr17 5972102 5972222 -79466258 + L2 LINE L2 1371 1488 -1826 186 282 39 39 chr17 5972576 5972654 -79465826 - MIR SINE MIR -103 105 28 723 263 59 0 chr17 5972943 5973129 -79465351 + MLT1F LTR MaLR 9 205 -337 602 113 0 120 chr17 5973129 5973262 -79465218 - SVA Other Other -406 980 864 280 274 0 36 chr17 5973270 5973354 -79465126 + MLT1F LTR MaLR 216 296 -246 1234 209 25 53 chr17 5973354 5973425 -79465055 - MLT1A1 LTR MaLR 0 365 294 1453 180 3 25 chr17 5973425 5973741 -79464739 + AluSq SINE Alu 2 310 -3 1234 209 25 53 chr17 5973741 5973990 -79464490 - MLT1A1 LTR MaLR -71 294 54 841 166 140 47 chr17 5974204 5974439 -79464041 + MLT1F LTR MaLR 286 542 0 193 253 0 27 chr17 5975512 5975587 -79462893 + L2 LINE L2 3015 3087 -185 229 216 57 45 chr17 5976118 5976206 -79462274 + L3 LINE CR1 575 663 -914 546 303 88 43 chr17 5977437 5977481 -79460999 - L1ME4a LINE L1 -233 5888 5847 2257 102 3 10 chr17 5977481 5977784 -79460696 + AluY SINE Alu 1 301 -10 546 303 88 43 chr17 5977784 5978205 -79460275 - L1ME4a LINE L1 -274 5847 5402 1133 187 20 24 chr17 5978289 5978535 -79459945 - L1PB4 LINE L1 -2 6154 5910 419 182 11 0 chr17 5978535 5978623 -79459857 + L1PB4 LINE L1 5762 5850 -306 2333 113 0 0 chr17 5978644 5978953 -79459527 - AluSg SINE Alu -1 309 1 3498 152 7 8 chr17 5979013 5979627 -79458853 - L1PA16 LINE L1 0 6166 5554 512 209 0 22 chr17 5979629 5979763 -79458717 + L1 LINE L1 3209 3339 -2807 5788 174 17 42 chr17 5979869 5981344 -79457136 + L1P4 LINE L1 3994 5429 -737 1609 141 0 72 chr17 5981344 5981667 -79456813 + AluSx SINE Alu 31 312 0 5788 174 17 42 chr17 5981667 5981729 -79456751 + L1P4 LINE L1 5429 5491 -675 341 267 14 62 chr17 5982279 5982425 -79456055 - LTR33 LTR ERVL -28 493 355 1474 216 92 77 chr17 5982425 5982903 -79455577 + MLT1E LTR MaLR 1 485 -108 210 108 0 54 chr17 5982917 5982932 -79455548 + (GAAAA)n Simple_repeat Simple_repeat 2 16 -20 2013 113 0 31 chr17 5982932 5983252 -79455228 + AluSg SINE Alu 1 310 0 210 108 0 54 chr17 5983252 5983273 -79455207 + (GAAAA)n Simple_repeat Simple_repeat 16 36 0 1342 185 122 24 chr17 5983771 5984100 -79454380 + MLT1A1 LTR MaLR 5 365 0 200 318 15 0 chr17 5984227 5984293 -79454187 - MIR3 SINE MIR -38 170 104 198 71 0 0 chr17 5984645 5984673 -79453807 + (GAAAA)n Simple_repeat Simple_repeat 2 29 0 349 274 82 30 chr17 5985282 5985417 -79453063 + MIR3 SINE MIR 67 208 0 2056 156 0 13 chr17 5985431 5985739 -79452741 + AluJb SINE Alu 1 304 -8 2386 79 0 0 chr17 5985816 5986120 -79452360 - AluY SINE Alu -7 304 1 26 64 0 0 chr17 5986300 5986347 -79452133 + AT_rich Low_complexity Low_complexity 1 47 0 418 294 121 22 chr17 5986727 5986958 -79451522 + MIR SINE MIR 5 258 -4 402 57 0 0 chr17 5986995 5987048 -79451432 + (TCCA)n Simple_repeat Simple_repeat 1 53 0 208 344 32 43 chr17 5987052 5987145 -79451335 - L2 LINE L2 -16 3297 3206 320 247 26 0 chr17 5987505 5987582 -79450898 + MIR SINE MIR 163 241 -21 2399 98 0 0 chr17 5988027 5988322 -79450158 + AluSg SINE Alu 1 295 -15 809 171 0 0 chr17 5989470 5989587 -79448893 + FLAM_C SINE Alu 1 117 -26 712 57 29 0 chr17 5989587 5989692 -79448788 + (GAAA)n Simple_repeat Simple_repeat 3 110 0 873 272 62 49 chr17 5989942 5990310 -79448170 + MLT1H LTR MaLR 29 401 -148 486 228 0 0 chr17 5991005 5991163 -79447317 + (ATG)n Simple_repeat Simple_repeat 1 158 0 252 100 0 0 chr17 5991171 5991211 -79447269 + (ATGGTG)n Simple_repeat Simple_repeat 1 40 0 345 367 82 46 chr17 5991307 5991699 -79446781 + L2 LINE L2 2866 3271 -1 222 37 0 0 chr17 5992306 5992333 -79446147 + (CA)n Simple_repeat Simple_repeat 2 28 0 488 303 51 28 chr17 5992742 5992920 -79445560 - MIR SINE MIR -12 250 69 702 275 57 50 chr17 5993420 5993989 -79444491 - L1M4 LINE L1 -2837 3309 2733 326 283 20 30 chr17 5994107 5994206 -79444274 - L1M4 LINE L1 -3600 2546 2449 3428 133 8 10 chr17 5994277 5994789 -79443691 + Tigger3b DNA MER2_type 1 511 -720 225 250 0 36 chr17 5995063 5995147 -79443333 + (TA)n Simple_repeat Simple_repeat 2 82 0 1679 106 0 8 chr17 5995186 5995422 -79443058 + AluSg SINE Alu 61 294 -16 2170 110 7 0 chr17 5995614 5995924 -79442556 - AluSx SINE Alu 0 312 1 1901 143 0 3 chr17 5997266 5997566 -79440914 + AluSc SINE Alu 1 299 -10 292 281 238 5 chr17 5998113 5998298 -79440182 - L3 LINE CR1 -89 1488 1261 2167 97 20 0 chr17 5998665 5998964 -79439516 + AluSg SINE Alu 1 305 -5 25 0 0 0 chr17 5999214 5999239 -79439241 + AT_rich Low_complexity Low_complexity 1 25 0 389 323 41 66 chr17 6000032 6000370 -79438110 + L1MEc LINE L1 2140 2428 -3787 563 316 36 0 chr17 6000430 6000598 -79437882 - MIR SINE MIR 0 262 89 770 186 11 57 chr17 6001753 6001930 -79436550 + MER5B DNA MER1_type 1 169 -9 183 220 51 51 chr17 6002379 6002438 -79436042 + L2 LINE L2 3160 3218 -54 651 310 56 19 chr17 6002841 6003109 -79435371 + L1ME1 LINE L1 5885 6162 -4 536 285 18 18 chr17 6003278 6003443 -79435037 + MER90 LTR ERV1 445 609 -5 209 269 0 0 chr17 6004265 6004317 -79434163 + (CA)n Simple_repeat Simple_repeat 2 53 0 334 236 73 41 chr17 6004572 6004695 -79433785 + L2 LINE L2 2964 3090 -182 1059 260 69 53 chr17 6004746 6005181 -79433299 - MLT1J LTR MaLR 0 511 70 1933 118 17 10 chr17 6005192 6005488 -79432992 + AluSq SINE Alu 1 298 -15 399 194 0 58 chr17 6005881 6005984 -79432496 + LTR67 LTR ERVL 458 554 -3 701 151 8 0 chr17 6006044 6006163 -79432317 - L1MA4 LINE L1 -6 6294 6175 1772 134 0 7 chr17 6006521 6006840 -79431640 + AluSc SINE Alu 1 317 0 2578 211 25 13 chr17 6007676 6007705 -79430775 + MER68 LTR ERV1 1 28 -534 1677 135 4 4 chr17 6007705 6008007 -79430473 - AluSq SINE Alu 0 319 18 2578 211 25 13 chr17 6008007 6008531 -79429949 + MER68 LTR ERV1 28 562 0 640 167 0 0 chr17 6009068 6009170 -79429310 + U6 snRNA snRNA 1 102 -5 2335 62 0 0 chr17 6009170 6009462 -79429018 - AluY SINE Alu -19 292 1 464 150 40 30 chr17 6009480 6009580 -79428900 + L1MA6 LINE L1 6200 6300 0 375 252 84 15 chr17 6009678 6009809 -79428671 - MIR SINE MIR -115 147 8 2003 127 17 0 chr17 6010370 6010670 -79427810 + AluSg SINE Alu 1 305 -5 375 23 0 0 chr17 6010687 6010731 -79427749 + (GGA)n Simple_repeat Simple_repeat 1 44 0 360 321 63 70 chr17 6011041 6011328 -79427152 - L1 LINE L1 -853 5293 5009 900 315 195 25 chr17 6011366 6012059 -79426421 + L2 LINE L2 2149 2959 -355 439 82 0 0 chr17 6012084 6012145 -79426335 - AluSp/q SINE Alu -13 300 240 916 106 15 0 chr17 6012344 6012476 -79426004 + AluY SINE Alu 1 134 -177 2137 92 7 3 chr17 6012476 6012770 -79425710 + AluSc SINE Alu 1 295 -14 2277 101 0 0 chr17 6013124 6013431 -79425049 + AluSq SINE Alu 1 307 -6 4527 274 90 26 chr17 6013438 6015613 -79422867 + L1 LINE L1 2663 4977 -1169 1068 181 24 52 chr17 6015615 6015825 -79422655 + MLT1A2 LTR MaLR 11 214 -160 665 220 0 8 chr17 6015841 6015973 -79422507 + L1MD2 LINE L1 722 852 -5557 * 929 69 0 0 chr17 6015967 6016083 -79422397 - L1PA5 LINE L1 -167 5987 5872 1281 55 0 0 chr17 6016083 6016242 -79422238 + L1PA5 LINE L1 5992 6154 0 261 0 0 0 chr17 6016248 6016277 -79422203 + (TA)n Simple_repeat Simple_repeat 2 30 0 1511 202 15 3 chr17 6016277 6016599 -79421881 + L1MD2 LINE L1 841 1166 -5243 1259 190 106 44 chr17 6016643 6016829 -79421651 + L1MD2 LINE L1 3099 3272 -3134 2266 89 7 0 chr17 6016829 6017133 -79421347 + AluSc SINE Alu 1 306 -3 1259 190 106 44 chr17 6017133 6017382 -79421098 + L1MD2 LINE L1 3272 3561 -2845 711 147 66 22 chr17 6017384 6017520 -79420960 + FLAM_C SINE Alu 2 143 0 2104 239 37 31 chr17 6017520 6017681 -79420799 + L1MD2 LINE L1 3953 4112 -2294 1646 165 44 7 chr17 6017681 6017978 -79420502 + AluJb SINE Alu 1 308 -4 2104 239 37 31 chr17 6017978 6018468 -79420012 + L1MD2 LINE L1 4112 4608 -1798 903 54 0 0 chr17 6018468 6018580 -79419900 + AluSg/x SINE Alu 189 300 -12 7379 49 10 12 chr17 6018617 6020080 -79418400 + SVA Other Other 3 1383 -3 25 0 0 0 chr17 6020116 6020141 -79418339 + AT_rich Low_complexity Low_complexity 1 25 0 491 239 99 52 chr17 6020335 6020678 -79417802 + L1MC5 LINE L1 7389 7747 -214 2987 215 35 48 chr17 6020692 6021053 -79417427 + L1MD2 LINE L1 4602 4966 -1653 1835 98 77 21 chr17 6021053 6021339 -79417141 + AluY SINE Alu 1 302 -9 2987 215 35 48 chr17 6021339 6021620 -79416860 + L1MD2 LINE L1 4966 5249 -1370 2351 75 3 0 chr17 6021620 6021925 -79416555 - AluSp SINE Alu -7 306 1 2987 215 35 48 chr17 6021925 6022781 -79415699 + L1MD2 LINE L1 5249 6086 -533 1119 143 0 0 chr17 6022782 6022950 -79415530 + AluSg/x SINE Alu 134 301 -11 733 112 96 24 chr17 6022960 6023085 -79415395 + FLAM_C SINE Alu 8 141 -2 2090 120 0 0 chr17 6023085 6023377 -79415103 + AluSx SINE Alu 1 292 -20 1791 234 22 18 chr17 6023397 6023855 -79414625 + L1MD2 LINE L1 6071 6530 -89 418 138 25 0 chr17 6023908 6023988 -79414492 + L1MD2 LINE L1 6537 6618 -1 1961 142 0 13 chr17 6023998 6024300 -79414180 + AluSq SINE Alu 1 298 -15 234 258 16 0 chr17 6024344 6024406 -79414074 + (TGAA)n Simple_repeat Simple_repeat 3 65 0 1145 139 0 0 chr17 6024428 6024594 -79413886 + AluJo SINE Alu 1 166 -146 202 271 0 0 chr17 6025086 6025134 -79413346 + MIR SINE MIR 194 241 -21 341 245 0 60 chr17 6026379 6026683 -79411797 + (CA)n Simple_repeat Simple_repeat 1 285 0 288 0 0 0 chr17 6026699 6026731 -79411749 + (CA)n Simple_repeat Simple_repeat 2 33 0 1719 173 10 0 chr17 6027422 6027728 -79410752 - AluJb SINE Alu -3 309 1 1769 104 4 0 chr17 6028085 6028326 -79410154 + AluSx SINE Alu 27 268 -44 374 339 93 32 chr17 6028468 6028608 -79409872 - L1MC/D LINE L1 -747 5399 5269 1425 25 0 0 chr17 6028608 6028771 -79409709 + L1PA5 LINE L1 5987 6149 -5 374 339 93 32 chr17 6028771 6029178 -79409302 - L1MC/D LINE L1 -877 5269 4890 2404 51 0 3 chr17 6029437 6029733 -79408747 + AluY SINE Alu 1 295 -16 337 307 195 15 chr17 6029746 6030013 -79408467 - L1MC/D LINE L1 -1722 4424 4110 1915 133 6 38 chr17 6030067 6030382 -79408098 - AluSq SINE Alu -8 305 1 228 244 0 0 chr17 6030666 6030707 -79407773 - MIR SINE MIR -132 76 36 906 9 0 0 chr17 6030956 6031064 -79407416 + AluY SINE Alu 203 310 -1 443 283 45 71 chr17 6031571 6031734 -79406746 - MIR SINE MIR -69 193 34 2191 98 0 0 chr17 6031734 6032029 -79406451 - AluSx SINE Alu -17 295 1 443 283 45 71 chr17 6032029 6032063 -79406417 - MIR SINE MIR -228 34 1 2251 70 10 3 chr17 6032661 6032962 -79405518 - AluSq SINE Alu -10 303 1 378 297 27 27 chr17 6032973 6033158 -79405322 + L2 LINE L2 1705 1889 -1425 917 245 71 40 chr17 6033160 6033511 -79404969 + MER92A LTR ERV1 1 362 -50 511 297 221 26 chr17 6033526 6034636 -79403844 + L2 LINE L2 1888 3218 -95 381 93 0 0 chr17 6034666 6034720 -79403760 + (TGAA)n Simple_repeat Simple_repeat 3 56 0 327 294 117 22 chr17 6035817 6035997 -79402483 + LTR16A1 LTR ERVL 168 364 -93 266 356 11 0 chr17 6036830 6036917 -79401563 + L2 LINE L2 3121 3208 -64 393 304 31 58 chr17 6037259 6037450 -79401030 - MIR3 SINE MIR -20 188 3 296 258 0 0 chr17 6038034 6038100 -79400380 + MIR SINE MIR 78 143 -65 736 248 18 91 chr17 6038558 6038832 -79399648 - MIR SINE MIR 0 262 9 2198 88 7 0 chr17 6039089 6039383 -79399097 - AluSg SINE Alu -10 300 5 813 199 30 6 chr17 6040178 6040344 -79398136 - MLT1B LTR MaLR 0 467 298 * 849 153 12 43 chr17 6040319 6040482 -79397998 - MLT1B LTR MaLR -199 191 34 513 182 0 0 chr17 6040494 6040593 -79397887 + (CA)n Simple_repeat Simple_repeat 2 100 0 387 343 69 23 chr17 6040939 6041114 -79397366 - L2 LINE L2 -1 3271 3089 914 217 4 71 chr17 6041177 6041417 -79397063 + MER58A DNA MER1_type 1 224 0 319 349 71 0 chr17 6041530 6041656 -79396824 + MIR3 SINE MIR 49 183 -25 2031 136 0 0 chr17 6042055 6042364 -79396116 + AluSx SINE Alu 4 312 0 389 235 105 45 chr17 6042391 6042616 -79395864 + MIR SINE MIR 19 260 -2 407 266 49 21 chr17 6042668 6042811 -79395669 - MIR3 SINE MIR -58 150 4 209 289 96 0 chr17 6042821 6042904 -79395576 + L2 LINE L2 3182 3272 0 231 103 0 0 chr17 6043274 6043313 -79395167 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 1779 122 0 0 chr17 6043314 6043568 -79394912 - AluSc SINE Alu -55 254 1 364 391 39 6 chr17 6044047 6044226 -79394254 + HAL1 LINE L1 1613 1797 -710 1987 118 0 77 chr17 6044510 6044833 -79393647 + AluSx SINE Alu 3 300 -12 402 296 68 46 chr17 6044851 6044901 -79393579 + L1ME LINE L1 5267 5314 -807 2346 98 0 3 chr17 6044901 6045198 -79393282 + AluSx SINE Alu 1 296 -16 2478 65 7 3 chr17 6045200 6045507 -79392973 + AluY SINE Alu 1 308 -3 402 296 68 46 chr17 6045507 6045786 -79392694 + L1ME LINE L1 5314 5603 -518 3907 128 32 8 chr17 6046076 6046691 -79391789 + L1PA16 LINE L1 5533 6162 -4 760 274 91 11 chr17 6046850 6047223 -79391257 + LTR33A LTR ERVL 121 523 0 349 292 289 0 chr17 6047223 6047535 -79390945 - L2 LINE L2 -517 2797 2396 252 0 0 0 chr17 6047540 6047568 -79390912 + (TTTTG)n Simple_repeat Simple_repeat 4 31 0 1771 118 4 4 chr17 6047614 6047859 -79390621 - AluSq SINE Alu -11 302 58 309 318 20 47 chr17 6048717 6048865 -79389615 + MIR SINE MIR 63 206 -56 2328 96 23 0 chr17 6049587 6049890 -79388590 + AluSg SINE Alu 1 310 0 221 283 283 26 chr17 6050002 6050193 -79388287 - MIR SINE MIR -1 261 22 306 0 0 0 chr17 6050931 6050965 -79387515 + (TG)n Simple_repeat Simple_repeat 2 35 0 201 143 0 0 chr17 6050966 6051001 -79387479 + (GA)n Simple_repeat Simple_repeat 2 36 0 308 253 76 0 chr17 6051040 6051119 -79387361 + L2 LINE L2 3152 3236 -36 407 257 53 9 chr17 6051197 6051310 -79387170 + L2 LINE L2 3188 3305 -8 277 320 155 39 chr17 6051365 6051705 -79386775 + L3 LINE CR1 1116 1508 -69 1050 154 64 86 chr17 6051705 6051850 -79386630 + MER30 DNA MER1_type 2 142 -88 2267 90 0 23 chr17 6051850 6052150 -79386330 + AluSg SINE Alu 1 293 -17 1050 154 64 86 chr17 6052150 6052237 -79386243 + MER30 DNA MER1_type 142 229 -1 277 320 155 39 chr17 6052237 6052284 -79386196 + L3 LINE CR1 1508 1548 -29 2338 96 0 0 chr17 6052731 6053023 -79385457 + AluSg SINE Alu 1 292 -18 593 279 11 34 chr17 6053221 6053400 -79385080 + MIR SINE MIR 29 203 -59 1173 282 95 36 chr17 6053974 6054502 -79383978 + L2 LINE L2 2222 2780 -534 1846 42 0 30 chr17 6054865 6055102 -79383378 + L1PA5 LINE L1 5925 6154 0 208 299 72 0 chr17 6055110 6055207 -79383273 + L2 LINE L2 2766 2869 -445 578 175 0 10 chr17 6055888 6055991 -79382489 + MLT1C LTR MaLR 1 102 -365 2239 88 0 7 chr17 6055992 6056275 -79382205 - AluSc SINE Alu -8 301 21 254 200 0 0 chr17 6056277 6056332 -79382148 - L1MC4 LINE L1 -540 7502 7448 1844 165 8 58 chr17 6056348 6056741 -79381739 + MLT1C LTR MaLR 95 467 0 2469 245 120 20 chr17 6056741 6057912 -79380568 + L1MC4 LINE L1 6482 7713 -95 331 269 0 119 chr17 6057999 6058053 -79380427 - MER5A DNA MER1_type -63 126 96 2376 116 0 0 chr17 6058053 6058363 -79380117 + AluSx SINE Alu 1 310 -2 331 269 0 119 chr17 6058363 6058442 -79380038 - MER5A DNA MER1_type -93 96 9 450 275 76 18 chr17 6058456 6058627 -79379853 + L2 LINE L2 2880 3060 -253 2122 190 47 19 chr17 6058687 6059156 -79379324 - MLT1D LTR MaLR -2 503 22 277 257 67 12 chr17 6059258 6059383 -79379097 + MIR SINE MIR 60 191 -65 184 379 29 19 chr17 6060216 6060319 -79378161 - L2 LINE L2 -19 3294 3191 859 72 7 7 chr17 6060522 6060660 -79377820 + (CA)n Simple_repeat Simple_repeat 2 139 0 3518 148 2 29 chr17 6060673 6060724 -79377756 - L1PA15 LINE L1 0 6165 6114 275 0 0 28 chr17 6060724 6060760 -79377720 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 1987 83 0 0 chr17 6060760 6061000 -79377480 - AluSg SINE Alu -31 279 40 3518 148 2 29 chr17 6061000 6061537 -79376943 - L1PA15 LINE L1 -49 6116 5592 2230 101 14 0 chr17 6061685 6061973 -79376507 - AluSc SINE Alu -17 292 1 327 312 71 51 chr17 6062868 6063020 -79375460 + L2 LINE L2 2812 2972 -300 420 20 0 0 chr17 6063020 6063069 -79375411 + (CA)n Simple_repeat Simple_repeat 1 49 0 327 312 71 51 chr17 6063069 6063169 -79375311 + L2 LINE L2 2972 3069 -203 2381 116 0 0 chr17 6063810 6064120 -79374360 + AluSg SINE Alu 1 310 0 2092 104 50 0 chr17 6064650 6064929 -79373551 - AluSq SINE Alu -6 307 15 190 226 0 94 chr17 6065721 6065774 -79372706 - L2 LINE L2 -86 3227 3180 3078 103 53 0 chr17 6065783 6066218 -79372262 + LTR22A LTR ERVK 1 458 0 305 302 133 46 chr17 6066560 6066724 -79371756 + MIR SINE MIR 31 211 -51 1011 191 3 6 chr17 6067306 6067619 -79370861 + (CAT)n Simple_repeat Simple_repeat 2 313 0 541 315 24 33 chr17 6067621 6067834 -79370646 - MIR SINE MIR -1 261 51 2162 108 24 0 chr17 6068093 6068380 -79370100 + AluSg SINE Alu 1 294 -16 365 297 18 0 chr17 6068716 6068827 -79369653 + MIR3 SINE MIR 82 194 -14 2117 125 0 0 chr17 6069242 6069585 -79368895 + AluSg SINE Alu 1 343 0 297 257 28 55 chr17 6069739 6069848 -79368632 + MIR SINE MIR 74 179 -83 596 299 17 17 chr17 6070029 6070203 -79368277 + MIR SINE MIR 41 214 -48 2322 93 14 0 chr17 6070973 6071264 -79367216 - AluSx SINE Alu -17 295 1 627 284 65 20 chr17 6071685 6072040 -79366440 - L1ME3 LINE L1 -277 5885 5515 426 254 27 9 chr17 6072046 6072156 -79366324 - MIR SINE MIR -61 147 36 2139 119 3 7 chr17 6073047 6073357 -79365123 - AluSc SINE Alu 0 309 1 233 361 25 25 chr17 6073358 6073405 -79365075 + L2 LINE L2 3149 3195 -77 253 231 31 0 chr17 6073405 6073470 -79365010 + MIR SINE MIR 193 259 -3 446 299 148 31 chr17 6073855 6074055 -79364425 - MLT1I LTR MaLR 0 409 163 2657 194 56 6 chr17 6074055 6074595 -79363885 + MLT1F1 LTR MaLR 1 567 0 446 299 148 31 chr17 6074595 6074685 -79363795 - MLT1I LTR MaLR -246 163 85 187 283 0 19 chr17 6074825 6074878 -79363602 + L2 LINE L2 2701 2752 -562 187 307 202 23 chr17 6074890 6075108 -79363372 + L2 LINE L2 3016 3272 0 324 161 0 0 chr17 6075111 6075173 -79363307 + (TGGA)n Simple_repeat Simple_repeat 1 62 0 259 282 94 8 chr17 6076083 6076102 -79362378 - MIR SINE MIR -71 191 175 2252 101 0 28 chr17 6076102 6076383 -79362097 + AluY SINE Alu 1 274 -37 218 0 95 0 chr17 6076383 6076425 -79362055 + A-rich Low_complexity Low_complexity 1 46 0 2252 101 0 28 chr17 6076425 6076461 -79362019 + AluY SINE Alu 274 309 -2 259 282 94 8 chr17 6076461 6076558 -79361922 - MIR SINE MIR -87 175 65 482 285 26 65 chr17 6076565 6076781 -79361699 - MIR3 SINE MIR -51 211 3 2724 93 132 5 chr17 6076943 6077374 -79361106 - LTR19A LTR ERV1 0 486 1 642 272 132 55 chr17 6078257 6078800 -79359680 - MLT1H LTR MaLR -3 552 1 611 261 64 80 chr17 6079905 6080154 -79358326 + MIR SINE MIR 2 246 -16 425 268 8 24 chr17 6080202 6080325 -79358155 - MIR SINE MIR -140 122 2 490 257 56 0 chr17 6080332 6080476 -79358004 + MIR SINE MIR 84 235 -27 732 260 28 0 chr17 6080495 6080676 -79357804 + MIR SINE MIR 63 248 -14 2373 89 7 3 chr17 6080738 6081040 -79357440 - AluSx SINE Alu -9 303 1 2324 117 0 3 chr17 6081430 6081737 -79356743 - AluSq SINE Alu -7 306 1 482 297 57 38 chr17 6082063 6082275 -79356205 - MIR SINE MIR 0 262 47 726 184 207 0 chr17 6082302 6082476 -79356004 + MIR SINE MIR 21 230 -32 679 144 18 0 chr17 6082602 6082713 -79355767 + MER5A DNA MER1_type 6 118 -71 1528 213 23 35 chr17 6082713 6082869 -79355611 + MLT1A1 LTR MaLR 1 157 -208 2467 84 0 0 chr17 6082869 6083166 -79355314 + AluSq SINE Alu 1 297 -16 1528 213 23 35 chr17 6083166 6083357 -79355123 + MLT1A1 LTR MaLR 157 344 -21 240 329 0 0 chr17 6083370 6083440 -79355040 + MER5A DNA MER1_type 120 189 0 407 357 55 6 chr17 6083456 6083638 -79354842 + MIR SINE MIR 22 212 -50 206 276 35 0 chr17 6084539 6084597 -79353883 - L3 LINE CR1 -127 1450 1391 625 206 103 7 chr17 6084601 6084747 -79353733 + MER45A DNA AcHobo 16 175 -3 752 267 6 0 chr17 6084880 6085045 -79353435 - MER96 DNA MER1_type? 0 175 10 316 217 0 0 chr17 6085257 6085317 -79353163 + MER5A DNA MER1_type 21 80 -109 2118 162 28 0 chr17 6085324 6085683 -79352797 - L1MB1 LINE L1 -356 5812 5444 351 209 0 0 chr17 6085678 6085745 -79352735 + L1MB1 LINE L1 5839 5905 -263 * 1241 143 10 0 chr17 6085746 6085955 -79352525 + MER2 DNA MER2_type 1 211 -134 225 137 20 20 chr17 6085956 6086007 -79352473 + (TATTG)n Simple_repeat Simple_repeat 3 53 0 1080 175 10 0 chr17 6086083 6086283 -79352197 + L1MB1 LINE L1 5905 6106 -62 1262 131 11 0 chr17 6086294 6086477 -79352003 + AluSg/x SINE Alu 120 304 -8 269 136 0 0 chr17 6086477 6086521 -79351959 + L1MB1 LINE L1 6124 6167 -1 340 221 0 63 chr17 6086540 6086635 -79351845 + MER5A DNA MER1_type 61 149 -40 4155 193 38 10 chr17 6086892 6088048 -79350432 + L1MB4 LINE L1 4944 6135 -45 2022 107 3 40 chr17 6088064 6088364 -79350116 + AluSp SINE Alu 1 289 -24 186 351 39 0 chr17 6088519 6088596 -79349884 - MIR3 SINE MIR -17 191 112 554 239 42 24 chr17 6088876 6089034 -79349446 + MIR3 SINE MIR 34 197 -54 25 0 0 0 chr17 6089034 6089059 -79349421 + AT_rich Low_complexity Low_complexity 1 25 0 333 0 0 0 chr17 6089215 6089252 -79349228 + (TG)n Simple_repeat Simple_repeat 2 38 0 525 288 36 7 chr17 6089340 6089479 -79349001 - MIR SINE MIR -95 167 25 1212 117 0 103 chr17 6089687 6089900 -79348580 + AluSx SINE Alu 1 191 -121 347 85 0 0 chr17 6089904 6089951 -79348529 + AluSc SINE Alu 61 107 -192 1488 113 0 5 chr17 6090006 6090201 -79348279 + AluSg/x SINE Alu 108 301 -11 1529 257 36 5 chr17 6090447 6090859 -79347621 + LTR16A LTR ERVL 26 450 0 1059 238 141 35 chr17 6091597 6092050 -79346430 - MLT1D LTR MaLR -4 501 1 403 297 27 0 chr17 6092324 6092435 -79346045 - MER81 DNA DNA 0 114 1 1103 190 100 35 chr17 6092729 6092883 -79345597 - MLT1C LTR MaLR -2 465 323 2069 116 71 100 chr17 6092883 6093322 -79345158 + MSTA LTR MaLR 3 428 0 1103 190 100 35 chr17 6093322 6093457 -79345023 - MLT1C LTR MaLR -144 323 157 264 362 11 11 chr17 6093489 6093583 -79344897 + L2 LINE L2 3117 3210 -62 259 330 11 11 chr17 6093595 6093686 -79344794 - L3 LINE CR1 -97 1480 1390 754 272 80 34 chr17 6093943 6094267 -79344213 + L1MC4 LINE L1 5391 5729 -392 446 335 41 10 chr17 6094281 6094475 -79344005 + L1MC4 LINE L1 5793 5992 -1816 312 291 75 22 chr17 6095381 6095515 -79342965 + HAL1b LINE L1 1201 1341 -7 400 299 37 43 chr17 6095601 6095788 -79342692 - MIR3 SINE MIR -3 205 20 225 0 0 0 chr17 6097481 6097506 -79340974 + (CA)n Simple_repeat Simple_repeat 1 25 0 380 106 0 15 chr17 6097635 6097676 -79340804 - MLT2B1 LTR ERVL 0 520 479 405 0 0 0 chr17 6097676 6097721 -79340759 + (TG)n Simple_repeat Simple_repeat 2 46 0 380 106 0 15 chr17 6097721 6097745 -79340735 - MLT2B1 LTR ERVL -41 479 456 228 233 33 0 chr17 6097749 6097809 -79340671 + L1MC4 LINE L1 6635 6696 -1346 207 0 0 0 chr17 6097810 6097833 -79340647 + (GA)n Simple_repeat Simple_repeat 2 24 0 1148 185 35 142 chr17 6097839 6098234 -79340246 - MLT2D LTR ERVL -61 353 1 256 227 91 0 chr17 6098311 6098377 -79340103 - MIR SINE MIR -74 188 117 620 289 28 28 chr17 6098404 6098615 -79339865 + MIR SINE MIR 52 262 0 2266 171 76 78 chr17 6099835 6100390 -79338090 + MLT2B3 LTR ERVL 1 554 0 481 263 23 8 chr17 6101112 6101245 -79337235 - LTR16C LTR ERVL 0 491 357 216 191 0 0 chr17 6101346 6101393 -79337087 + T-rich Low_complexity Low_complexity 1 47 0 2246 82 10 3 chr17 6101396 6101699 -79336781 - AluSc SINE Alu -4 305 1 378 276 86 65 chr17 6101701 6101933 -79336547 - LTR16C LTR ERVL -253 238 2 519 358 39 25 chr17 6102043 6102322 -79336158 - L3 LINE CR1 -2 1575 1293 2155 186 86 0 chr17 6102409 6102851 -79335629 + MLT1D LTR MaLR 26 505 0 714 320 114 53 chr17 6102896 6103389 -79335091 - L3 LINE CR1 -354 1223 701 341 267 11 33 chr17 6104022 6104112 -79334368 - L3 LINE CR1 -903 674 587 2543 181 52 81 chr17 6104229 6104582 -79333898 + L1MB5 LINE L1 5258 5312 -862 1669 193 0 3 chr17 6104582 6104882 -79333598 + AluJo SINE Alu 1 299 -13 2543 181 52 81 chr17 6104882 6105389 -79333091 + L1MB5 LINE L1 5312 5832 -342 235 262 82 0 chr17 6105534 6105595 -79332885 + L3 LINE CR1 609 674 -903 597 193 0 17 chr17 6105632 6105751 -79332729 + L1MB5 LINE L1 6058 6174 0 1984 135 66 23 chr17 6105802 6106151 -79332329 - THE1B LTR MaLR 0 364 1 228 143 41 0 chr17 6106760 6106809 -79331671 + MER112 DNA MER1_type 106 156 -104 1945 130 33 0 chr17 6107160 6107460 -79331020 + AluSg SINE Alu 1 310 0 320 327 46 7 chr17 6107806 6108081 -79330399 + L1ME LINE L1 5373 5704 -417 433 268 41 8 chr17 6108145 6108268 -79330212 - MIR SINE MIR -51 211 85 430 182 0 0 chr17 6108350 6108416 -79330064 - L2 LINE L2 0 3272 3207 239 200 20 0 chr17 6108663 6108713 -79329767 - L2 LINE L2 0 3313 3263 1959 123 0 3 chr17 6108787 6109087 -79329393 + AluSx SINE Alu 1 299 -13 23 0 0 0 chr17 6109202 6109225 -79329255 + AT_rich Low_complexity Low_complexity 1 23 0 324 75 15 30 chr17 6109564 6109631 -79328849 + (TAAA)n Simple_repeat Simple_repeat 4 69 0 2121 55 7 0 chr17 6109786 6110058 -79328422 - AluY SINE Alu -1 310 37 439 70 42 0 chr17 6110068 6110139 -79328341 + T-rich Low_complexity Low_complexity 3 76 0 1641 178 10 0 chr17 6110141 6110444 -79328036 - AluSg SINE Alu -4 306 1 278 314 32 8 chr17 6111188 6111312 -79327168 + HAL1 LINE L1 23 149 -2358 2060 103 3 3 chr17 6111326 6111618 -79326862 + AluSq SINE Alu 1 292 -21 1077 171 6 0 chr17 6111939 6112115 -79326365 - MLT1F1 LTR MaLR 0 567 391 585 267 48 0 chr17 6112085 6112231 -79326249 + MER58B DNA MER1_type 150 302 -39 * 714 210 8 0 chr17 6112238 6112362 -79326118 - MER58B DNA MER1_type -22 319 195 * 1539 196 149 9 chr17 6112351 6112687 -79325793 - MLT1F1 LTR MaLR -184 383 1 782 274 71 110 chr17 6112758 6113544 -79324936 + HAL1 LINE L1 745 1471 -1036 1238 204 14 5 chr17 6113544 6113765 -79324715 + MER58A DNA MER1_type 2 224 0 782 274 71 110 chr17 6113765 6114169 -79324311 + HAL1 LINE L1 1471 1889 -618 2100 116 7 7 chr17 6115036 6115339 -79323141 + AluSq SINE Alu 1 303 -10 1919 118 3 41 chr17 6115758 6116073 -79322407 - AluSx SINE Alu -9 303 1 483 203 15 68 chr17 6116519 6116652 -79321828 - MIR SINE MIR -115 147 22 264 273 0 30 chr17 6117733 6117838 -79320642 + (CACG)n Simple_repeat Simple_repeat 1 101 0 2065 118 17 0 chr17 6118557 6118853 -79319627 + AluSx SINE Alu 1 301 -11 264 301 110 43 chr17 6119199 6119408 -79319072 - L2 LINE L2 -526 2788 2566 387 211 0 0 chr17 6119568 6119658 -79318822 + (CA)n Simple_repeat Simple_repeat 1 90 0 621 257 0 0 chr17 6119705 6119884 -79318596 + (CA)n Simple_repeat Simple_repeat 1 179 0 223 223 202 32 chr17 6120058 6120152 -79318328 - MIR SINE MIR -82 126 17 181 256 0 0 chr17 6120166 6120209 -79318271 - MIR3 SINE MIR -26 182 140 341 248 87 52 chr17 6120608 6120763 -79317717 + MIR3 SINE MIR 35 192 -42 1970 104 3 10 chr17 6120888 6121200 -79317280 + AluY SINE Alu 3 312 0 748 254 174 40 chr17 6121204 6121601 -79316879 - MLT1J LTR MaLR -51 460 11 184 321 71 0 chr17 6121829 6121913 -79316567 - L2 LINE L2 -695 2619 2530 275 227 91 11 chr17 6123182 6123270 -79315210 + L2 LINE L2 2916 3010 -262 210 276 92 40 chr17 6123248 6123324 -79315156 + L2 LINE L2 2722 2801 -513 * 407 257 20 10 chr17 6123341 6123442 -79315038 + MER94 DNA DNA 19 120 -14 555 308 86 4 chr17 6123452 6123686 -79314794 + L2 LINE L2 2809 3061 -252 1032 285 98 21 chr17 6124156 6124535 -79313945 - MLT1K LTR MaLR -34 554 147 246 266 42 112 chr17 6124690 6124833 -79313647 + MIR SINE MIR 60 192 -70 317 287 144 35 chr17 6125789 6125963 -79312517 + MIR SINE MIR 18 210 -52 1875 141 7 0 chr17 6126173 6126470 -79312010 - AluSg SINE Alu 0 310 12 432 236 34 0 chr17 6126603 6126692 -79311788 + L1MC5 LINE L1 7810 7901 -60 211 379 15 0 chr17 6127053 6127119 -79311361 - MIR SINE MIR -108 100 34 467 216 28 102 chr17 6127251 6127427 -79311053 - MIR SINE MIR -1 261 99 300 264 55 11 chr17 6127530 6127621 -79310859 - L1ME LINE L1 -340 5781 5687 384 248 38 53 chr17 6127640 6127773 -79310707 + L2 LINE L2 3180 3310 -3 439 141 22 0 chr17 6127796 6127888 -79310592 + GA-rich Low_complexity Low_complexity 1 94 0 662 216 24 72 chr17 6128005 6128049 -79310431 - MER5B DNA MER1_type 0 178 133 2382 63 0 10 chr17 6128049 6128349 -79310131 - AluSg SINE Alu -13 297 1 662 216 24 72 chr17 6128349 6128471 -79310009 - MER5B DNA MER1_type -45 133 20 465 293 18 24 chr17 6128705 6128869 -79309611 + MER5A DNA MER1_type 26 188 -1 414 255 114 62 chr17 6129540 6129865 -79308615 - HAL1 LINE L1 -832 1675 1334 395 198 127 32 chr17 6129899 6130025 -79308455 - MIR SINE MIR -17 245 108 2108 124 0 7 chr17 6130762 6131068 -79307412 + AluSx SINE Alu 1 304 -8 1974 156 122 64 chr17 6131612 6132094 -79306386 + MLT2B1 LTR ERVL 3 512 -8 287 116 0 116 chr17 6132360 6132429 -79306051 + MLT1K LTR MaLR 182 242 -346 246 235 20 0 chr17 6132396 6132447 -79306033 + MLT1K LTR MaLR 141 192 -396 * 315 291 106 70 chr17 6133186 6133543 -79304937 + L2 LINE L2 2450 2819 -495 2402 69 0 0 chr17 6134579 6134882 -79303598 - AluY SINE Alu -8 303 1 193 294 0 0 chr17 6135398 6135449 -79303031 + L2 LINE L2 2487 2537 -777 2241 141 19 14 chr17 6135549 6135912 -79302568 - LTR45B LTR ERV1 -101 388 24 1824 147 7 3 chr17 6135912 6136205 -79302275 + AluSx SINE Alu 1 294 -18 889 237 163 50 chr17 6136247 6136419 -79302061 + L2 LINE L2 2536 2687 -626 2033 83 3 53 chr17 6136419 6136744 -79301736 + AluSp SINE Alu 1 310 0 889 237 163 50 chr17 6136744 6137169 -79301311 + L2 LINE L2 2687 3221 -92 316 260 10 0 chr17 6137241 6137341 -79301139 - L1MC4 LINE L1 -17 8025 7925 206 214 0 0 chr17 6137345 6137387 -79301093 + (TCCA)n Simple_repeat Simple_repeat 4 45 0 1926 141 3 10 chr17 6137410 6137722 -79300758 - AluSg SINE Alu 0 310 1 570 216 20 40 chr17 6137843 6138011 -79300469 - L1ME2 LINE L1 -5 6161 5997 463 259 0 28 chr17 6138012 6138120 -79300360 + L2 LINE L2 3209 3313 0 2138 121 0 0 chr17 6138565 6138863 -79299617 - AluSq SINE Alu -15 298 1 528 16 0 0 chr17 6139074 6139135 -79299345 + (CA)n Simple_repeat Simple_repeat 2 62 0 225 327 144 26 chr17 6139504 6139657 -79298823 - L2 LINE L2 -1 3271 3101 242 321 47 0 chr17 6140229 6140335 -79298145 + L2 LINE L2 2550 2660 -654 333 0 0 0 chr17 6141348 6141385 -79297095 + (TG)n Simple_repeat Simple_repeat 2 38 0 2011 119 20 0 chr17 6142617 6142910 -79295570 - AluSx SINE Alu -13 299 1 1958 139 0 3 chr17 6142932 6143235 -79295245 - AluSx SINE Alu 0 312 11 1993 126 0 0 chr17 6143250 6143543 -79294937 - AluSx SINE Alu -11 301 9 1886 125 21 4 chr17 6143544 6143825 -79294655 - AluSx SINE Alu -26 286 1 629 304 65 42 chr17 6143866 6144221 -79294259 + L2 LINE L2 2910 3272 0 2448 81 0 0 chr17 6144222 6144520 -79293960 + AluY SINE Alu 1 298 -13 818 163 0 0 chr17 6144953 6145076 -79293404 - AluJo SINE Alu -22 290 168 816 134 0 0 chr17 6145078 6145190 -79293290 - AluJo SINE Alu -200 112 1 430 327 72 33 chr17 6146744 6147050 -79291430 + L1ME4a LINE L1 3459 3776 -2370 487 154 0 11 chr17 6147189 6147280 -79291200 + MLT1C LTR MaLR 1 90 -377 2323 113 3 0 chr17 6147298 6147607 -79290873 - AluSx SINE Alu -2 310 1 202 362 0 0 chr17 6147646 6147715 -79290765 + GA-rich Low_complexity Low_complexity 3 71 0 2097 50 0 12 chr17 6147887 6148146 -79290334 + L1PA8 LINE L1 5913 6168 -4 408 321 137 50 chr17 6148617 6149090 -79289390 + L1ME4a LINE L1 4726 5253 -893 255 301 83 68 chr17 6149091 6149228 -79289252 + L1ME4a LINE L1 5255 5388 -733 2188 118 16 3 chr17 6149228 6149534 -79288946 + AluSg SINE Alu 1 310 0 255 301 83 68 chr17 6149534 6149722 -79288758 + L1ME4a LINE L1 5388 5585 -536 262 300 74 33 chr17 6150363 6150876 -79287604 + L1ME4a LINE L1 5588 6121 0 898 283 118 30 chr17 6151740 6152118 -79286362 + L1MEd LINE L1 9 352 -5958 2196 120 0 13 chr17 6152118 6152434 -79286046 + AluSx SINE Alu 1 312 0 898 283 118 30 chr17 6152434 6152902 -79285578 + L1MEd LINE L1 352 777 -5533 2298 104 0 7 chr17 6152902 6153199 -79285281 + AluSp SINE Alu 1 295 -18 898 283 118 30 chr17 6153199 6153819 -79284661 + L1MEd LINE L1 777 1669 -4641 248 214 36 0 chr17 6154847 6154903 -79283577 + MER53 DNA DNA 132 189 0 250 235 49 25 chr17 6154916 6154997 -79283483 - MLT1K LTR MaLR -342 246 164 2096 76 11 4 chr17 6155086 6155349 -79283131 + AluSg SINE Alu 34 298 -12 834 185 93 6 chr17 6155626 6155788 -79282692 - MER5B DNA MER1_type -2 176 1 1461 127 162 4 chr17 6155935 6156188 -79282292 + AluSx SINE Alu 1 293 -19 2411 61 0 38 chr17 6156206 6156519 -79281961 + AluY SINE Alu 5 305 -6 306 201 71 32 chr17 6156580 6156734 -79281746 + L1ME4a LINE L1 5962 6121 0 558 290 51 19 chr17 6157758 6157972 -79280508 + MIR SINE MIR 25 245 -17 196 330 20 30 chr17 6158008 6158108 -79280372 + L2 LINE L2 3001 3099 -173 359 273 106 15 chr17 6159201 6159333 -79279147 + MIR3 SINE MIR 56 199 -9 1875 238 74 6 chr17 6159937 6160559 -79277921 + L1MEd LINE L1 2577 3240 -2889 645 165 0 31 chr17 6160560 6160687 -79277793 + MLT1A1 LTR MaLR 197 319 -46 3935 238 60 47 chr17 6160690 6161462 -79277018 + L1MEd LINE L1 3235 3996 -2149 2488 70 0 0 chr17 6161462 6161760 -79276720 + AluY SINE Alu 1 298 -13 3935 238 60 47 chr17 6161760 6162136 -79276344 + L1MEd LINE L1 3996 4366 -1779 1864 161 0 24 chr17 6162136 6162427 -79276053 - AluJb SINE Alu -14 298 15 3935 238 60 47 chr17 6162427 6163467 -79275013 + L1MEd LINE L1 4366 5449 -696 316 222 56 0 chr17 6163644 6163716 -79274764 - HERVL LTR ERVL -848 4806 4731 593 236 25 6 chr17 6163842 6163999 -79274481 + L1MB7 LINE L1 6007 6166 -18 2208 129 3 0 chr17 6164342 6164653 -79273827 + AluSx SINE Alu 1 312 0 1004 120 0 0 chr17 6164671 6164804 -79273676 + AluSg SINE Alu 1 133 -177 2129 138 3 3 chr17 6164804 6165115 -79273365 + AluSx SINE Alu 1 311 -1 403 213 13 20 chr17 6165115 6165265 -79273215 + GA-rich Low_complexity Low_complexity 2 150 0 385 225 96 53 chr17 6165830 6165992 -79272488 + L1M4 LINE L1 5069 5243 -903 4161 4 0 0 chr17 6165992 6166450 -79272030 + L1PA2 LINE L1 5698 6155 0 385 225 96 53 chr17 6166450 6166496 -79271984 + L1M4 LINE L1 5243 5286 -860 220 27 54 0 chr17 6166550 6166587 -79271893 + (TAAAA)n Simple_repeat Simple_repeat 3 41 0 539 186 155 0 chr17 6166600 6166793 -79271687 + L1ME1 LINE L1 5218 5440 -722 1355 112 0 0 chr17 6166793 6166963 -79271517 + AluSq SINE Alu 1 170 -143 735 273 62 32 chr17 6166964 6167305 -79271175 + L1ME1 LINE L1 5810 6160 -6 586 206 18 42 chr17 6167339 6167504 -79270976 - MLT1J1 LTR MaLR -285 161 1 240 309 41 24 chr17 6168376 6168499 -79269981 - MIR3 SINE MIR -48 160 36 2259 72 3 52 chr17 6168523 6168850 -79269630 + AluSq SINE Alu 2 313 0 2294 121 0 0 chr17 6169009 6169315 -79269165 + AluSx SINE Alu 1 306 -6 1140 157 0 5 chr17 6171069 6171266 -79267214 - MLT1D LTR MaLR 0 505 310 542 208 66 85 chr17 6171305 6171517 -79266963 - MLT1D LTR MaLR -295 210 3 1426 49 5 16 chr17 6171761 6171945 -79266535 - L1PA7 LINE L1 -1 6153 5972 291 297 93 0 chr17 6172695 6172813 -79265667 - MIR3 SINE MIR -46 162 34 267 54 0 0 chr17 6173843 6173880 -79264600 + (CAGGG)n Simple_repeat Simple_repeat 2 38 0 284 247 75 21 chr17 6174096 6174189 -79264291 + MIR3 SINE MIR 87 184 -24 233 351 9 0 chr17 6175140 6175251 -79263229 - L3 LINE CR1 -36 1541 1430 580 329 50 22 chr17 6175471 6175693 -79262787 - MIR SINE MIR -26 236 9 192 97 0 0 chr17 6176504 6176535 -79261945 + (CGGGGG)n Simple_repeat Simple_repeat 3 33 0 416 59 0 0 chr17 6176668 6176719 -79261761 - AluSp/q SINE Alu -37 276 226 2383 100 0 0 chr17 6177402 6177702 -79260778 + AluSg SINE Alu 1 300 -10 2376 98 3 9 chr17 6177771 6178086 -79260394 + AluSp SINE Alu 1 313 0 3988 64 14 50 chr17 6178479 6178806 -79259674 + L1PA8 LINE L1 5619 5918 -254 2417 108 0 0 chr17 6178806 6179112 -79259368 + AluSc SINE Alu 1 306 -3 3988 64 14 50 chr17 6179112 6179359 -79259121 + L1PA8 LINE L1 5918 6172 0 2262 54 0 0 chr17 6180011 6180271 -79258209 - AluSc SINE Alu -49 260 1 2198 109 13 16 chr17 6181043 6181347 -79257133 + AluSg SINE Alu 1 303 -7 204 280 120 13 chr17 6182168 6182243 -79256237 - MIR SINE MIR -1 261 179 361 127 0 0 chr17 6182243 6182298 -79256182 + MSTD LTR MaLR 1 55 -341 2430 83 0 3 chr17 6182316 6182616 -79255864 - AluSq SINE Alu -14 299 1 447 311 61 25 chr17 6182634 6182830 -79255650 + L1ME3 LINE L1 5766 5968 -202 1012 172 27 11 chr17 6183012 6183198 -79255282 - AluJo SINE Alu -4 308 120 1763 138 32 0 chr17 6183311 6183622 -79254858 - L1MA5A LINE L1 0 6297 5977 249 105 0 0 chr17 6183628 6183666 -79254814 + MLT1A2 LTR MaLR 75 112 -262 2748 204 35 24 chr17 6184130 6184761 -79253719 + LTR9B LTR ERV1 7 644 0 248 241 46 22 chr17 6184849 6184918 -79253562 + L1ME3 LINE L1 6025 6091 -79 1057 175 5 63 chr17 6184918 6185090 -79253390 + MER6B DNA MER2_type 1 159 -706 2143 107 0 67 chr17 6185090 6185417 -79253063 - AluSq SINE Alu -8 305 1 1057 175 5 63 chr17 6185417 6185467 -79253013 + MER6B DNA MER2_type 159 210 0 248 241 46 22 chr17 6185467 6185533 -79252947 + L1ME3 LINE L1 6091 6163 -7 312 91 0 0 chr17 6185934 6185978 -79252502 + (TCCCC)n Simple_repeat Simple_repeat 1 44 0 2105 117 7 26 chr17 6185978 6186287 -79252193 - AluSx SINE Alu -9 303 1 299 320 0 13 chr17 6186290 6186368 -79252112 - L3 LINE CR1 -1269 308 232 2391 74 0 10 chr17 6186937 6187236 -79251244 - AluSg SINE Alu -13 297 2 551 308 128 4 chr17 6188476 6188710 -79249770 - L2 LINE L2 -95 3177 2915 566 204 71 0 chr17 6189289 6189402 -79249078 + L2 LINE L2 3193 3313 0 207 213 0 43 chr17 6190268 6190315 -79248165 - MIR SINE MIR -88 120 79 321 345 34 14 chr17 6190432 6190580 -79247900 - L2 LINE L2 -529 2785 2635 2366 95 0 13 chr17 6190905 6191221 -79247259 - AluSx SINE Alu 0 312 1 2439 83 3 0 chr17 6191807 6192108 -79246372 + AluSx SINE Alu 1 302 -10 302 344 32 8 chr17 6192390 6192515 -79245965 - MIR SINE MIR -96 166 39 362 206 54 11 chr17 6193378 6193470 -79245010 + MIR3 SINE MIR 65 160 -48 219 253 101 25 chr17 6194533 6194612 -79243868 + MIR3 SINE MIR 102 186 -22 1075 207 45 5 chr17 6196645 6196867 -79241613 - AluJo SINE Alu -81 231 1 465 224 164 55 chr17 6197026 6197191 -79241289 + MER5A DNA MER1_type 4 186 -3 215 358 94 35 chr17 6197194 6197596 -79240884 + L2 LINE L2 2263 2688 -626 * 346 336 114 57 chr17 6197595 6198032 -79240448 + L2 LINE L2 2811 3272 0 237 65 0 0 chr17 6198044 6198075 -79240405 + (TGAA)n Simple_repeat Simple_repeat 2 32 0 207 100 0 0 chr17 6200172 6200202 -79238278 + (TTCA)n Simple_repeat Simple_repeat 2 31 0 281 347 32 0 chr17 6200203 6200298 -79238182 - L2 LINE L2 -13 3300 3203 499 332 72 11 chr17 6200362 6200624 -79237856 + L2 LINE L2 2481 2758 -556 272 325 179 51 chr17 6200887 6201222 -79237258 + L3 LINE CR1 1180 1557 -20 443 242 147 19 chr17 6201658 6201815 -79236665 - MIR SINE MIR -70 192 16 929 258 141 42 chr17 6202111 6202665 -79235815 + L1MC4a LINE L1 5364 5972 -1836 314 316 15 0 chr17 6203678 6203811 -79234669 + LTR33 LTR ERVL 382 516 -5 331 316 129 59 chr17 6203848 6204322 -79234158 + L2 LINE L2 2807 3313 0 763 49 0 0 chr17 6205384 6205486 -79232994 - L1P3 LINE L1 -357 5797 5696 223 342 13 0 chr17 6205566 6205642 -79232838 + MIR3 SINE MIR 101 177 -31 352 142 0 57 chr17 6205731 6205808 -79232672 + MIR SINE MIR 103 172 -90 253 303 74 33 chr17 6206233 6206355 -79232125 + L2 LINE L2 3145 3271 -1 1990 95 29 0 chr17 6206391 6206716 -79231764 + AluSg SINE Alu 1 333 0 239 274 27 0 chr17 6206964 6207037 -79231443 + MIR SINE MIR 65 139 -69 876 73 0 0 chr17 6207809 6207918 -79230562 + AluSq/x SINE Alu 25 133 -180 2044 127 0 10 chr17 6207926 6208225 -79230255 + AluSx SINE Alu 1 296 -16 478 290 34 0 chr17 6208326 6208502 -79229978 - MLT1J2 LTR MaLR -259 191 10 1660 65 9 13 chr17 6209482 6209712 -79228768 + AluSc SINE Alu 1 229 -80 1322 175 77 17 chr17 6209920 6210217 -79228263 - MER58B DNA MER1_type 0 341 27 583 189 42 100 chr17 6210248 6210438 -79228042 - MER5A DNA MER1_type 0 189 11 232 279 76 25 chr17 6210508 6210587 -79227893 + L2 LINE L2 3187 3269 -3 261 229 157 0 chr17 6210637 6210720 -79227760 + MIR SINE MIR 87 182 -80 493 214 0 103 chr17 6211538 6211683 -79226797 + MIR SINE MIR 79 208 -54 209 307 113 31 chr17 6211717 6212079 -79226401 + L2 LINE L2 2669 3096 -176 231 291 74 40 chr17 6212204 6212379 -79226101 - MER5A DNA MER1_type -5 184 4 516 170 0 0 chr17 6212901 6213007 -79225473 + GA-rich Low_complexity Low_complexity 4 109 0 229 380 65 0 chr17 6213015 6213107 -79225373 - MIR SINE MIR -81 127 30 2072 96 24 10 chr17 6214489 6214831 -79223649 - AluSp SINE Alu 0 313 1 195 389 0 0 chr17 6214893 6214965 -79223515 + L2 LINE L2 2427 2498 -816 305 254 40 63 chr17 6214980 6215106 -79223374 - L1MC5 LINE L1 -29 7932 7810 2495 173 16 42 chr17 6215964 6216331 -79222149 + L1MB8 LINE L1 5375 5723 -455 1463 106 55 0 chr17 6216331 6216369 -79222111 + AluSg/x SINE Alu 82 116 -194 206 32 32 0 chr17 6216369 6216400 -79222080 + (TAAAA)n Simple_repeat Simple_repeat 2 33 0 1463 106 55 0 chr17 6216400 6216578 -79221902 + AluSg/x SINE Alu 116 310 0 2495 173 16 42 chr17 6216578 6216781 -79221699 + L1MB8 LINE L1 5723 5930 -248 189 0 0 0 chr17 6216881 6216902 -79221578 + (TCCCC)n Simple_repeat Simple_repeat 5 25 0 700 183 137 0 chr17 6217166 6217297 -79221183 + AluSx SINE Alu 42 190 -122 470 317 128 32 chr17 6217345 6217815 -79220665 + L2 LINE L2 2350 2864 -450 253 323 40 32 chr17 6217970 6218094 -79220386 + L2 LINE L2 2677 2801 -513 201 264 0 85 chr17 6220085 6220214 -79218266 + L2 LINE L2 2932 3049 -223 334 393 9 5 chr17 6220940 6221159 -79217321 + L2 LINE L2 2871 3090 -182 2340 89 0 0 chr17 6221613 6221916 -79216564 + AluSx SINE Alu 1 303 -9 740 257 23 0 chr17 6222723 6222898 -79215582 - MER58A DNA MER1_type -1 223 45 2341 106 0 0 chr17 6223725 6224037 -79214443 - AluSx SINE Alu 0 312 1 255 277 62 39 chr17 6224920 6225050 -79213430 - L2 LINE L2 -219 3053 2921 337 264 20 81 chr17 6225559 6225707 -79212773 + L3b LINE CR1 1290 1428 -155 285 219 106 41 chr17 6225888 6226011 -79212469 + MER5A DNA MER1_type 29 159 -30 185 324 66 44 chr17 6225903 6226039 -79212441 - MER5B DNA MER1_type -37 141 3 * 666 294 108 5 chr17 6227219 6227423 -79211057 - MIR SINE MIR -22 240 16 2418 175 88 63 chr17 6227564 6228195 -79210285 + MER21B LTR ERV1 267 861 -2 2309 91 0 0 chr17 6228294 6228590 -79209890 - AluY SINE Alu -15 296 1 270 160 0 0 chr17 6229163 6229213 -79209267 + (CA)n Simple_repeat Simple_repeat 2 51 0 295 290 121 2 chr17 6229358 6229511 -79208969 - MIR3 SINE MIR -16 192 23 1874 192 32 68 chr17 6230032 6230498 -79207982 + MLT2B1 LTR ERVL 1 447 -73 2359 78 10 0 chr17 6230498 6230804 -79207676 - AluSp SINE Alu -4 309 1 1874 192 32 68 chr17 6230804 6230868 -79207612 + MLT2B1 LTR ERVL 447 512 -8 1157 195 32 18 chr17 6231146 6231367 -79207113 + MER58A DNA MER1_type 1 224 0 246 32 0 0 chr17 6232883 6232914 -79205566 + (TC)n Simple_repeat Simple_repeat 2 32 0 * 398 20 20 0 chr17 6232913 6232964 -79205516 + (TA)n Simple_repeat Simple_repeat 1 52 0 2300 111 0 0 chr17 6233323 6233629 -79204851 - AluSg SINE Alu -4 306 1 300 191 236 0 chr17 6233826 6233915 -79204565 + LTR16A1 LTR ERVL 7 116 -341 * 995 146 18 0 chr17 6233914 6234085 -79204395 + MER58A DNA MER1_type 42 215 -9 679 309 52 4 chr17 6234130 6234399 -79204081 + LTR16A1 LTR ERVL 170 451 -6 2164 123 3 0 chr17 6234732 6235041 -79203439 - AluY SINE Alu -1 310 1 387 304 200 24 chr17 6235120 6235370 -79203110 - L2 LINE L2 0 3272 2979 204 350 47 47 chr17 6235521 6235795 -79202685 - L2 LINE L2 -169 3103 2830 255 344 64 57 chr17 6235841 6236123 -79202357 - L2 LINE L2 -569 2745 2462 292 268 57 32 chr17 6236150 6236273 -79202207 + MIR3 SINE MIR 72 197 -11 572 309 80 0 chr17 6236282 6236483 -79201997 - MIR SINE MIR -41 221 5 379 324 84 6 chr17 6236779 6236958 -79201522 - MLT1J2 LTR MaLR 0 450 258 2385 77 0 0 chr17 6236973 6237271 -79201209 - AluY SINE Alu -11 300 3 1896 141 3 10 chr17 6237273 6237579 -79200901 - AluSq SINE Alu -9 304 1 916 127 18 6 chr17 6237581 6237746 -79200734 - MER58A DNA MER1_type -8 216 50 328 253 11 23 chr17 6237753 6237840 -79200640 - MER58A DNA MER1_type -12 95 10 265 263 95 80 chr17 6238055 6238192 -79200288 - L2 LINE L2 0 3272 3134 1154 186 4 72 chr17 6238298 6238561 -79199919 + AluJo SINE Alu 55 299 -13 272 286 39 0 chr17 6238583 6238660 -79199820 + L2 LINE L2 3162 3241 -31 180 0 0 0 chr17 6238675 6238695 -79199785 + (TGAA)n Simple_repeat Simple_repeat 1 20 0 2186 88 3 33 chr17 6238958 6239263 -79199217 - AluSx SINE Alu -16 296 1 330 327 6 42 chr17 6239335 6239500 -79198980 - MIR3 SINE MIR -35 173 15 2381 64 0 0 chr17 6239575 6239872 -79198608 - AluY SINE Alu -14 297 1 497 68 0 0 chr17 6239893 6239967 -79198513 - Alu SINE Alu 0 310 237 285 366 55 12 chr17 6240077 6240241 -79198239 - L2 LINE L2 -43 3270 3100 651 311 88 26 chr17 6240332 6240454 -79198026 - LTR33 LTR ERVL -3 518 405 4222 34 4 0 chr17 6240454 6240951 -79197529 + L1PA4 LINE L1 5657 6155 0 651 311 88 26 chr17 6240951 6241282 -79197198 - LTR33 LTR ERVL -116 405 37 2642 297 110 36 chr17 6241329 6242271 -79196209 + HAL1 LINE L1 26 897 -1610 2315 97 0 0 chr17 6242271 6242571 -79195909 + AluSx SINE Alu 1 300 -12 2642 297 110 36 chr17 6242571 6242892 -79195588 + HAL1 LINE L1 897 1193 -1314 2729 106 3 5 chr17 6242892 6243268 -79195212 - THE1C LTR MaLR 0 375 1 2642 297 110 36 chr17 6243268 6243369 -79195111 + HAL1 LINE L1 1193 1285 -1222 2692 154 12 51 chr17 6243369 6243787 -79194693 + MLT1C LTR MaLR 1 399 -68 1775 119 47 72 chr17 6243787 6244106 -79194374 - AluJo SINE Alu -1 311 1 2692 154 12 51 chr17 6244106 6244173 -79194307 + MLT1C LTR MaLR 399 467 0 2642 297 110 36 chr17 6244173 6244691 -79193789 + HAL1 LINE L1 1285 2050 -457 1070 282 102 15 chr17 6244691 6245092 -79193388 - L2 LINE L2 -26 3287 2852 1358 281 54 30 chr17 6245106 6245518 -79192962 - L2 LINE L2 -579 2735 2305 2184 201 24 72 chr17 6245518 6246100 -79192380 + MLT2B3 LTR ERVL 1 554 0 1358 281 54 30 chr17 6246100 6246225 -79192255 - L2 LINE L2 -1009 2305 2185 425 294 23 60 chr17 6246239 6246504 -79191976 + HAL1 LINE L1 2055 2309 -198 2345 133 72 8 chr17 6246855 6247255 -79191225 - MSTA LTR MaLR -2 426 1 405 70 0 0 chr17 6248171 6248228 -79190252 + (TC)n Simple_repeat Simple_repeat 2 58 0 1179 189 18 14 chr17 6248240 6248462 -79190018 - AluJo SINE Alu -16 296 74 2157 90 0 4 chr17 6248569 6248848 -79189632 - AluSx SINE Alu -34 278 1 2450 286 69 24 chr17 6249672 6250999 -79187481 - L1MEc LINE L1 -4410 1986 600 359 266 276 16 chr17 6251086 6251277 -79187203 - MLT1H1 LTR MaLR -189 366 126 1293 212 146 35 chr17 6251277 6251674 -79186806 + MLT2B1 LTR ERVL 1 441 -79 258 32 0 0 chr17 6251680 6251711 -79186769 + (CA)n Simple_repeat Simple_repeat 2 32 0 219 69 0 0 chr17 6251716 6251745 -79186735 + (TATG)n Simple_repeat Simple_repeat 3 31 0 29 0 0 62 chr17 6251748 6251796 -79186684 + AT_rich Low_complexity Low_complexity 1 45 0 372 197 0 0 chr17 6251812 6251878 -79186602 - Tigger5 DNA MER2_type 0 2323 2258 270 141 0 109 chr17 6251933 6251997 -79186483 - Tigger5 DNA MER2_type 0 2323 2267 246 116 0 0 chr17 6252008 6252051 -79186429 + (TG)n Simple_repeat Simple_repeat 2 44 0 378 0 0 0 chr17 6252152 6252194 -79186286 + (TG)n Simple_repeat Simple_repeat 2 43 0 294 77 0 0 chr17 6252200 6252239 -79186241 + MLT2D LTR ERVL 376 414 0 * 402 240 117 13 chr17 6252239 6252377 -79186103 - MLT1H LTR MaLR -421 174 1 1162 152 165 9 chr17 6252383 6252692 -79185788 + MSTA LTR MaLR 1 406 -26 2108 108 3 3 chr17 6252701 6252987 -79185493 - AluSg SINE Alu -1 309 24 281 139 0 0 chr17 6252994 6253037 -79185443 + MSTA LTR MaLR 386 428 0 1412 251 101 6 chr17 6253039 6253545 -79184935 - MER20B DNA MER1_type -61 722 169 318 331 13 53 chr17 6255086 6255237 -79183243 + L2 LINE L2 2607 2751 -563 231 167 0 91 chr17 6255333 6255399 -79183081 + MIR SINE MIR 132 191 -71 555 85 0 0 chr17 6255444 6255526 -79182954 + (CAT)n Simple_repeat Simple_repeat 1 82 0 537 110 30 0 chr17 6256404 6256504 -79181976 + (TCTA)n Simple_repeat Simple_repeat 2 104 0 263 306 153 8 chr17 6256504 6256628 -79181852 - L2 LINE L2 -4 3309 3168 197 341 57 16 chr17 6257248 6257371 -79181109 - MIR3 SINE MIR -78 130 3 827 200 107 19 chr17 6257464 6257669 -79180811 + MIR SINE MIR 16 238 -24 2205 130 0 13 chr17 6258187 6258495 -79179985 + AluSx SINE Alu 2 305 -7 356 206 66 110 chr17 6258849 6258985 -79179495 + MER91B DNA MER1_type 1 130 -60 342 218 0 12 chr17 6259000 6259081 -79179399 + MER91B DNA MER1_type 90 175 -21 193 148 0 148 chr17 6260125 6260186 -79178294 - MIR SINE MIR -56 206 155 379 211 11 0 chr17 6260193 6260283 -79178197 - MER69A DNA AcHobo -23 154 64 262 141 0 141 chr17 6260303 6260367 -79178113 - MIR SINE MIR -105 157 103 358 257 81 95 chr17 6260945 6261155 -79177325 - HAL1 LINE L1 -1 2506 2300 472 202 0 21 chr17 6261327 6261421 -79177059 - MER66B LTR ERV1 0 486 395 2481 89 0 6 chr17 6261441 6261754 -79176726 + AluSq SINE Alu 1 311 -2 1546 182 42 7 chr17 6261829 6262137 -79176343 - MER66B LTR ERV1 -141 345 27 2319 86 3 26 chr17 6262750 6263063 -79175417 - AluSx SINE Alu -6 306 1 298 211 88 70 chr17 6264254 6264368 -79174112 - MIR3 SINE MIR -6 202 87 626 0 14 0 chr17 6264399 6264473 -79174007 + (TTTTC)n Simple_repeat Simple_repeat 5 79 0 1874 181 65 65 chr17 6264840 6265267 -79173213 - MLT1D LTR MaLR -5 500 71 2408 94 0 0 chr17 6265267 6265566 -79172914 + AluSx SINE Alu 2 300 -12 1874 181 65 65 chr17 6265566 6265631 -79172849 - MLT1D LTR MaLR -433 72 8 418 248 10 10 chr17 6266533 6266634 -79171846 + L2 LINE L2 3209 3309 -4 194 304 18 0 chr17 6266675 6266731 -79171749 - MIR3 SINE MIR -31 177 121 1196 239 64 0 chr17 6266734 6267031 -79171449 + MER90 LTR ERV1 297 612 -2 310 363 73 0 chr17 6267258 6267462 -79171018 - L2 LINE L2 -522 2792 2574 2398 104 0 0 chr17 6268074 6268381 -79170099 - AluSq SINE Alu -6 307 1 1260 239 144 17 chr17 6268496 6268906 -79169574 - MLT1C LTR MaLR -5 462 1 203 357 123 7 chr17 6270041 6270195 -79168285 - L2 LINE L2 -544 2770 2599 579 193 36 94 chr17 6270275 6270467 -79168013 + MER91B DNA MER1_type 4 184 -6 558 254 75 10 chr17 6270999 6271200 -79167280 + LTR33 LTR ERVL 1 214 -307 238 290 122 36 chr17 6272297 6272576 -79165904 - L2 LINE L2 -653 2661 2359 409 306 31 83 chr17 6273329 6273443 -79165037 - MIR SINE MIR 0 262 164 2083 122 7 3 chr17 6273443 6273774 -79164706 - AluSx SINE Alu 0 312 2 409 306 31 83 chr17 6273774 6273888 -79164592 - MIR SINE MIR -98 164 46 2293 119 0 0 chr17 6274425 6274720 -79163760 - AluSx SINE Alu -17 295 1 1395 229 44 11 chr17 6275011 6275374 -79163106 + MER74B LTR ERVL 56 430 -192 336 239 11 34 chr17 6275542 6275630 -79162850 + MER74B LTR ERVL 447 532 -90 2023 135 0 20 chr17 6275916 6276219 -79162261 + AluSx SINE Alu 5 301 -11 874 245 5 33 chr17 6278473 6278637 -79159843 + MIR SINE MIR 45 212 -50 2346 99 3 7 chr17 6278637 6278940 -79159540 + AluSx SINE Alu 1 302 -10 186 43 0 0 chr17 6278940 6278963 -79159517 + (TA)n Simple_repeat Simple_repeat 2 24 0 874 245 5 33 chr17 6278963 6279009 -79159471 + MIR SINE MIR 210 250 -12 203 218 141 39 chr17 6279465 6279543 -79158937 - L2 LINE L2 -3 3310 3225 239 222 0 0 chr17 6279829 6279874 -79158606 - MIR SINE MIR -68 140 96 2247 278 75 56 chr17 6279920 6280105 -79158375 - MER45C DNA AcHobo -628 953 773 2441 100 0 0 chr17 6280105 6280414 -79158066 - AluSc SINE Alu 0 309 1 2247 278 75 56 chr17 6280414 6281046 -79157434 - MER45C DNA AcHobo -808 773 115 2406 98 0 0 chr17 6281046 6281351 -79157129 + AluSx SINE Alu 1 305 -7 2247 278 75 56 chr17 6281351 6281429 -79157051 - MER45C DNA AcHobo -1466 115 40 271 167 114 68 chr17 6281692 6281824 -79156656 + (CTGGGG)n Simple_repeat Simple_repeat 4 141 0 2016 108 0 0 chr17 6282122 6282373 -79156107 - AluSq SINE Alu -62 251 1 1315 73 6 0 chr17 6282386 6282550 -79155930 - AluY SINE Alu -14 297 133 2855 32 0 0 chr17 6282550 6282865 -79155615 - AluYb8 SINE Alu -3 315 1 637 287 78 41 chr17 6283163 6283407 -79155073 - L1M4 LINE L1 -2868 3278 3026 305 197 14 0 chr17 6283529 6283600 -79154880 + MER69A DNA AcHobo 106 177 0 339 275 90 85 chr17 6283731 6283920 -79154560 - L1M4 LINE L1 -3309 2837 2648 1876 179 3 3 chr17 6284061 6284369 -79154111 + AluJo SINE Alu 1 308 -4 366 354 65 10 chr17 6284709 6285017 -79153463 - HAL1 LINE L1 -741 1766 1442 961 131 0 14 chr17 6285028 6285173 -79153307 - FLAM_C SINE Alu 0 143 1 2544 65 0 3 chr17 6285329 6285639 -79152841 - AluY SINE Alu -2 309 1 1169 170 43 0 chr17 6285834 6286022 -79152458 - AluJo SINE Alu -116 196 1 183 42 0 0 chr17 6286026 6286050 -79152430 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 6519 181 52 17 chr17 6286369 6286492 -79151988 - L1MB7 LINE L1 -20 6164 6047 2374 104 0 13 chr17 6286492 6286808 -79151672 - AluSx SINE Alu 0 312 1 6519 181 52 17 chr17 6286808 6288973 -79149507 - L1MB7 LINE L1 -137 6047 3793 840 172 38 59 chr17 6289268 6289454 -79149026 + MER5A DNA MER1_type 7 188 -1 1516 107 158 12 chr17 6289967 6290220 -79148260 - AluSg SINE Alu -10 290 1 734 213 100 0 chr17 6290270 6290430 -79148050 + MER45A DNA AcHobo 3 178 0 196 321 12 37 chr17 6291282 6291363 -79147117 - L2 LINE L2 0 3272 3194 311 296 11 0 chr17 6291747 6291835 -79146645 + L1M4 LINE L1 3793 3881 -2265 2581 157 8 26 chr17 6292399 6292844 -79145636 + L1MB3 LINE L1 5695 6132 -51 2389 98 0 0 chr17 6292844 6293140 -79145340 + AluSx SINE Alu 1 296 -16 2581 157 8 26 chr17 6293140 6293190 -79145290 + L1MB3 LINE L1 6132 6181 -2 266 209 22 33 chr17 6293196 6293287 -79145193 + (TAA)n Simple_repeat Simple_repeat 3 92 0 24 0 0 0 chr17 6293327 6293351 -79145129 + AT_rich Low_complexity Low_complexity 1 24 0 232 329 76 55 chr17 6293603 6293986 -79144494 + L1MEd LINE L1 330 720 -5399 252 0 0 0 chr17 6294001 6294029 -79144451 + (CA)n Simple_repeat Simple_repeat 1 28 0 288 303 52 32 chr17 6294141 6294296 -79144184 - L2 LINE L2 -932 2382 2225 192 364 65 48 chr17 6294459 6294690 -79143790 + L2 LINE L2 3035 3269 -3 488 276 98 6 chr17 6294974 6295137 -79143343 - MIR SINE MIR -52 210 33 328 325 53 8 chr17 6295649 6295792 -79142688 + MIR SINE MIR 28 145 -63 202 220 40 90 chr17 6296122 6296222 -79142258 + MIR SINE MIR 45 139 -69 402 257 140 0 chr17 6297506 6297642 -79140838 + MIR SINE MIR 65 219 -43 709 236 85 19 chr17 6298697 6298909 -79139571 - MIR SINE MIR -9 253 28 411 309 157 5 chr17 6299276 6299486 -79138994 + MIR SINE MIR 2 243 -19 353 298 6 0 chr17 6300477 6300638 -79137842 + (TG)n Simple_repeat Simple_repeat 1 162 0 256 253 0 53 chr17 6300639 6300734 -79137746 + CT-rich Low_complexity Low_complexity 4 93 0 231 36 0 0 chr17 6300841 6300869 -79137611 + (CA)n Simple_repeat Simple_repeat 2 29 0 2100 112 3 3 chr17 6301351 6301646 -79136834 + AluSg SINE Alu 1 295 -15 342 266 52 32 chr17 6302076 6302225 -79136255 - MIR3 SINE MIR -52 156 33 210 298 181 0 chr17 6302967 6303061 -79135419 - MIR3 SINE MIR -52 156 46 463 252 54 77 chr17 6303797 6303863 -79134617 + L2 LINE L2 2848 2914 -399 2148 111 0 10 chr17 6303863 6304161 -79134319 + AluSq SINE Alu 5 299 -14 463 252 54 77 chr17 6304161 6304316 -79134164 + L2 LINE L2 2914 3064 -249 2530 239 61 28 chr17 6304366 6304607 -79133873 - L1ME1 LINE L1 -6 6160 5920 400 313 79 68 chr17 6304607 6305001 -79133479 - L1PB3 LINE L1 -229 5925 5537 2096 117 3 0 chr17 6305001 6305300 -79133180 - AluSp SINE Alu -13 300 1 400 313 79 68 chr17 6305300 6305488 -79132992 - L1PB3 LINE L1 -617 5537 5333 1973 124 24 7 chr17 6305488 6305786 -79132694 - AluSg SINE Alu -7 303 1 400 313 79 68 chr17 6305786 6305838 -79132642 - L1PB3 LINE L1 -821 5333 5283 283 295 54 54 chr17 6305847 6305976 -79132504 + L2 LINE L2 3185 3313 0 327 285 117 36 chr17 6305980 6306117 -79132363 + MIR3 SINE MIR 49 196 -12 256 281 27 96 chr17 6306568 6306714 -79131766 + MIR3 SINE MIR 19 154 -54 189 0 0 0 chr17 6307345 6307366 -79131114 + (GGCTG)n Simple_repeat Simple_repeat 5 25 0 1071 75 0 0 chr17 6307675 6307808 -79130672 + AluSq/x SINE Alu 1 133 -180 2110 135 0 19 chr17 6307814 6308132 -79130348 + AluSx SINE Alu 1 312 0 352 247 21 11 chr17 6308672 6308765 -79129715 - MIR SINE MIR -74 134 41 1897 65 47 127 chr17 6309285 6309624 -79128856 - AluSx SINE Alu 0 312 1 389 333 21 14 chr17 6309698 6309839 -79128641 + L2 LINE L2 3116 3257 -15 399 255 131 38 chr17 6310412 6310679 -79127801 - MLT1I LTR MaLR -1 408 117 207 286 29 14 chr17 6310743 6310813 -79127667 + MIR3 SINE MIR 118 188 -20 853 191 105 49 chr17 6311382 6311706 -79126774 + L1M4 LINE L1 4125 4466 -1680 207 300 55 9 chr17 6312117 6312227 -79126253 + L3 LINE CR1 1304 1418 -159 223 328 50 42 chr17 6312255 6312374 -79126106 - L2 LINE L2 -43 3229 3110 2380 84 0 0 chr17 6312699 6312997 -79125483 - AluSq SINE Alu -15 298 1 294 29 0 0 chr17 6313325 6313360 -79125120 + (TG)n Simple_repeat Simple_repeat 1 35 0 330 278 68 25 chr17 6313410 6313572 -79124908 - L2 LINE L2 -338 2975 2807 227 359 0 0 chr17 6313563 6313627 -79124853 + L3 LINE CR1 1505 1568 -9 * 339 338 26 7 chr17 6313899 6314050 -79124430 - MIR SINE MIR -3 259 106 510 294 114 5 chr17 6314536 6314747 -79123733 + MIR SINE MIR 3 236 -26 924 127 0 22 chr17 6314930 6315064 -79123416 - FLAM_C SINE Alu 0 133 3 201 121 0 0 chr17 6315389 6315422 -79123058 + (CAGA)n Simple_repeat Simple_repeat 3 35 0 1754 165 0 28 chr17 6316283 6316604 -79121876 + AluJo SINE Alu 1 312 0 270 0 0 0 chr17 6316666 6316696 -79121784 + (TC)n Simple_repeat Simple_repeat 1 30 0 * 309 89 0 0 chr17 6316695 6316740 -79121740 + (CA)n Simple_repeat Simple_repeat 1 45 0 309 89 0 0 chr17 6316888 6316933 -79121547 + (CA)n Simple_repeat Simple_repeat 1 45 0 626 280 60 10 chr17 6317112 6317312 -79121168 + MIR SINE MIR 39 248 -14 433 326 72 54 chr17 6317567 6317972 -79120508 + L2 LINE L2 2834 3245 -27 2151 98 0 7 chr17 6318771 6319066 -79119414 + AluSx SINE Alu 9 301 -11 248 329 0 15 chr17 6319123 6319236 -79119244 - MIR SINE MIR -68 140 76 258 32 0 0 chr17 6319761 6319792 -79118688 + (TTTTC)n Simple_repeat Simple_repeat 2 32 0 2148 70 29 0 chr17 6319794 6320067 -79118413 - AluSp SINE Alu -32 281 1 353 181 134 79 chr17 6322080 6322207 -79116273 - MIR3 SINE MIR -17 191 58 424 279 16 16 chr17 6322264 6322393 -79116087 + MIR SINE MIR 49 177 -85 2358 66 0 16 chr17 6323115 6323418 -79115062 + AluY SINE Alu 1 298 -13 728 202 0 16 chr17 6323634 6323763 -79114717 + FLAM_C SINE Alu 3 129 -4 27 0 0 0 chr17 6323764 6323791 -79114689 + AT_rich Low_complexity Low_complexity 1 27 0 225 304 44 22 chr17 6323986 6324121 -79114359 + MIR3 SINE MIR 61 198 -10 2383 82 0 13 chr17 6324793 6325108 -79113372 - AluY SINE Alu 0 311 1 266 204 19 0 chr17 6325527 6325581 -79112899 + MER91B DNA MER1_type 8 62 -128 284 305 42 0 chr17 6325883 6325978 -79112502 + MIR3 SINE MIR 110 208 0 2113 132 3 3 chr17 6326075 6326386 -79112094 + AluSx SINE Alu 1 311 -1 298 321 107 15 chr17 6326729 6326950 -79111530 + MIR SINE MIR 1 252 -10 183 42 0 0 chr17 6327008 6327032 -79111448 + (CA)n Simple_repeat Simple_repeat 1 24 0 263 200 14 71 chr17 6327688 6327758 -79110722 + L2 LINE L2 3206 3271 -1 23 54 0 0 chr17 6328383 6328420 -79110060 + GC_rich Low_complexity Low_complexity 1 37 0 180 125 36 18 chr17 6328549 6328605 -79109875 + (CCG)n Simple_repeat Simple_repeat 3 59 0 33 56 0 0 chr17 6328624 6328678 -79109802 + GC_rich Low_complexity Low_complexity 1 54 0 226 217 33 22 chr17 6328697 6328789 -79109691 + (CCCCG)n Simple_repeat Simple_repeat 4 96 0 476 275 26 96 chr17 6329695 6329924 -79108556 - L3 LINE CR1 -72 1505 1293 218 180 16 0 chr17 6330624 6330685 -79107795 + (TG)n Simple_repeat Simple_repeat 1 62 0 501 353 101 37 chr17 6331604 6332117 -79106363 + L3 LINE CR1 272 817 -760 1058 110 6 0 chr17 6332543 6332716 -79105764 + (TCC)n Simple_repeat Simple_repeat 2 175 0 937 140 17 3 chr17 6332749 6333103 -79105377 + CT-rich Low_complexity Low_complexity 1 359 0 2062 107 43 0 chr17 6333674 6333973 -79104507 - AluSx SINE Alu 0 312 1 449 366 33 15 chr17 6334080 6334416 -79104064 - L1MC4a LINE L1 -1911 5897 5556 1974 114 9 52 chr17 6334503 6334828 -79103652 + AluSq SINE Alu 1 311 -2 2162 94 44 0 chr17 6334976 6335273 -79103207 + AluSx SINE Alu 1 310 -2 2302 85 3 0 chr17 6335626 6335933 -79102547 + AluSg SINE Alu 1 308 -2 187 349 92 0 chr17 6336000 6336109 -79102371 - L3b LINE CR1 -123 1460 1342 2474 67 0 3 chr17 6336140 6336452 -79102028 + AluY SINE Alu 1 311 0 764 244 15 79 chr17 6336474 6336740 -79101740 - MIR SINE MIR 0 262 14 198 344 76 30 chr17 6336803 6336934 -79101546 + MIR3 SINE MIR 65 201 -7 265 324 57 45 chr17 6337733 6337909 -79100571 - MIR3 SINE MIR -29 179 2 1998 138 13 0 chr17 6338219 6338341 -79100139 + AluSx SINE Alu 1 120 -192 189 0 0 0 chr17 6338341 6338362 -79100118 + (TAAAA)n Simple_repeat Simple_repeat 2 22 0 1998 138 13 0 chr17 6338362 6338537 -79099943 + AluSx SINE Alu 120 302 -10 355 282 120 9 chr17 6339487 6339621 -79098859 + MIR SINE MIR 19 164 -60 2409 71 0 0 chr17 6339697 6340007 -79098473 - AluSg SINE Alu 0 310 1 2406 96 0 0 chr17 6341525 6341837 -79096643 - AluSx SINE Alu 0 312 1 965 279 56 37 chr17 6341926 6342303 -79096177 + MLT1K LTR MaLR 1 384 -204 269 310 95 0 chr17 6342695 6342811 -79095669 + MIR SINE MIR 92 218 -44 1127 96 30 0 chr17 6342977 6343170 -79095310 + AluSg/x SINE Alu 140 337 0 205 320 0 39 chr17 6343182 6343260 -79095220 + L2 LINE L2 3188 3262 -10 498 328 33 6 chr17 6343350 6343533 -79094947 + MIR SINE MIR 1 188 -74 559 243 40 20 chr17 6343820 6343968 -79094512 - MIR SINE MIR -2 260 110 212 220 9 119 chr17 6346602 6346711 -79091769 - L2 LINE L2 -1 3312 3216 677 239 55 0 chr17 6347306 6347469 -79091011 + MIR SINE MIR 91 262 0 2244 97 0 13 chr17 6349194 6349502 -79088978 + AluSx SINE Alu 1 304 -8 2553 50 0 7 chr17 6349656 6349955 -79088525 - AluY SINE Alu -14 297 1 288 0 0 0 chr17 6350239 6350271 -79088209 + (CA)n Simple_repeat Simple_repeat 2 33 0 5000 182 175 41 chr17 6350314 6351871 -79086609 - L1MC4 LINE L1 -216 7826 6032 1059 283 153 38 chr17 6351873 6353168 -79085312 - L1MEc LINE L1 -4074 2236 793 269 310 0 0 chr17 6353272 6353343 -79085137 - L1MEc LINE L1 -5488 631 561 2266 237 88 94 chr17 6353764 6354188 -79084292 - HAL1 LINE L1 -461 2046 1621 1529 153 42 0 chr17 6354188 6354429 -79084051 - AluJo SINE Alu -59 253 3 2266 237 88 94 chr17 6354429 6355242 -79083238 - HAL1 LINE L1 -886 1621 817 606 272 97 53 chr17 6355240 6355279 -79083201 - HAL1 LINE L1 -2150 357 321 * 2448 150 67 12 chr17 6355279 6355685 -79082795 + MSTA LTR MaLR 1 428 0 606 272 97 53 chr17 6355685 6355987 -79082493 - HAL1 LINE L1 -2186 321 1 2128 118 10 0 chr17 6356303 6356613 -79081867 + AluSx SINE Alu 12 312 0 679 316 51 40 chr17 6357079 6357548 -79080932 + HAL1 LINE L1 1 474 -2033 1031 267 119 38 chr17 6357549 6358070 -79080410 + HAL1 LINE L1 1585 2147 -360 1929 176 38 27 chr17 6358431 6358800 -79079680 + MLT1A2 LTR MaLR 1 373 -1 881 0 0 52 chr17 6360313 6360449 -79078031 + (GAA)n Simple_repeat Simple_repeat 1 129 0 194 315 61 88 chr17 6361186 6361516 -79076964 - L2 LINE L2 -26 3246 2926 906 253 36 44 chr17 6361897 6362261 -79076219 + L1ME2 LINE L1 4886 5246 -900 541 143 151 0 chr17 6362300 6362426 -79076054 + L1MB7 LINE L1 6040 6184 0 604 220 60 0 chr17 6362442 6362592 -79075888 + L1ME2 LINE L1 5232 5390 -756 349 227 77 56 chr17 6362593 6362945 -79075535 + AluSx SINE Alu 1 182 -120 1762 160 14 3 chr17 6362945 6363239 -79075241 + AluSx SINE Alu 1 297 -15 615 250 152 23 chr17 6363256 6363512 -79074968 + L1ME2 LINE L1 5440 5728 -2267 710 198 62 51 chr17 6363513 6363690 -79074790 + MLT1D LTR MaLR 305 483 -22 1041 190 144 9 chr17 6363743 6364035 -79074445 + L1ME2 LINE L1 5835 6164 0 344 266 53 39 chr17 6364073 6364280 -79074200 + L1MC4 LINE L1 7832 8041 -1 451 176 7 3 chr17 6364597 6364754 -79073726 + MER3 DNA MER1_type 1 203 -6 466 233 30 30 chr17 6364920 6365053 -79073427 + MIR3 SINE MIR 30 162 -46 243 266 76 38 chr17 6365327 6365406 -79073074 - MIR SINE MIR -147 115 34 223 170 0 21 chr17 6365688 6365735 -79072745 + (GGGTG)n Simple_repeat Simple_repeat 4 49 0 548 286 66 31 chr17 6366341 6366537 -79071943 + MIR SINE MIR 48 250 -12 263 256 0 12 chr17 6366571 6366657 -79071823 + L1P5 LINE L1 5346 5430 -721 289 286 29 0 chr17 6366754 6366859 -79071621 + L1MC4a LINE L1 5796 5903 -1905 368 273 11 0 chr17 6368886 6368974 -79069506 + MIR3 SINE MIR 79 167 -41 452 211 32 0 chr17 6369953 6370048 -79068432 - MER5A DNA MER1_type -80 109 12 421 220 214 29 chr17 6370125 6370298 -79068182 + HAL1 LINE L1 7 211 -2296 763 44 0 0 chr17 6370300 6370390 -79068090 - 5S rRNA rRNA -31 90 1 1214 268 82 31 chr17 6370390 6370901 -79067579 + HAL1 LINE L1 202 738 -1769 3306 216 65 22 chr17 6370908 6372142 -79066338 + L1ME2 LINE L1 4902 6333 -1 306 290 21 11 chr17 6372156 6372249 -79066231 + HAL1 LINE L1 776 869 -1638 1025 229 64 74 chr17 6372289 6372788 -79065692 + HAL1 LINE L1 971 1464 -1043 1961 199 43 21 chr17 6372832 6373250 -79065230 + L1MDa LINE L1 17 443 -6097 1366 165 30 33 chr17 6373280 6373583 -79064897 + L1MD1 LINE L1 5446 5747 -495 1087 121 0 0 chr17 6373583 6373724 -79064756 - AluJb SINE Alu -15 297 157 1971 172 135 31 chr17 6373726 6374179 -79064301 + L1MD1 LINE L1 5742 6241 -1 549 128 35 106 chr17 6374174 6374315 -79064165 + HAL1 LINE L1 1566 1696 -811 * 785 114 16 32 chr17 6374324 6374447 -79064033 + FLAM_C SINE Alu 19 139 -4 232 317 24 0 chr17 6374452 6374534 -79063946 + HAL1 LINE L1 1692 1775 -732 254 300 8 42 chr17 6375027 6375147 -79063333 + L1ME2 LINE L1 5966 6081 -83 326 376 143 8 chr17 6375257 6375515 -79062965 + L3 LINE CR1 1284 1576 -1 247 330 112 86 chr17 6377142 6377375 -79061105 + L2 LINE L2 2945 3183 -89 197 292 233 8 chr17 6378343 6378463 -79060017 + MIR3 SINE MIR 16 162 -46 372 233 68 53 chr17 6378923 6379056 -79059424 - L2 LINE L2 0 3313 3179 28 29 0 0 chr17 6379742 6379777 -79058703 + AT_rich Low_complexity Low_complexity 1 35 0 1708 134 4 8 chr17 6379845 6380099 -79058381 - AluJo SINE Alu 0 312 60 1907 146 31 0 chr17 6380642 6380929 -79057551 - AluJo SINE Alu -15 297 2 25 51 0 0 chr17 6381085 6381124 -79057356 + AT_rich Low_complexity Low_complexity 1 39 0 184 297 94 16 chr17 6381143 6381207 -79057273 + MIR SINE MIR 25 93 -169 277 345 75 51 chr17 6381662 6381924 -79056556 + L2 LINE L2 2444 2698 -616 2160 118 0 0 chr17 6381924 6382212 -79056268 + AluSq SINE Alu 1 288 -25 189 94 0 0 chr17 6382218 6382250 -79056230 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 277 345 75 51 chr17 6382250 6382313 -79056167 + L2 LINE L2 2702 2784 -530 997 285 142 34 chr17 6382313 6383900 -79054580 + L1ME3A LINE L1 4162 5929 -233 544 156 0 11 chr17 6384050 6384140 -79054340 + Tigger7 DNA MER2_type 22 110 -2377 2364 91 0 0 chr17 6384140 6384437 -79054043 - AluSx SINE Alu -15 297 1 1044 96 0 7 chr17 6384437 6384573 -79053907 - AluSq/x SINE Alu -177 135 1 1214 188 14 5 chr17 6384588 6384811 -79053669 + Tigger7 DNA MER2_type 201 425 -2062 1342 83 0 0 chr17 6384811 6384980 -79053500 + AluY SINE Alu 140 308 -3 330 248 102 80 chr17 6385839 6385881 -79052599 - MIR3 SINE MIR -52 156 116 2171 120 0 3 chr17 6385881 6386180 -79052300 + AluSx SINE Alu 1 298 -14 330 248 102 80 chr17 6386180 6386274 -79052206 - MIR3 SINE MIR -92 116 17 214 345 126 8 chr17 6386547 6386666 -79051814 - L2 LINE L2 -6 3266 3134 388 242 11 22 chr17 6386779 6386870 -79051610 + MER21B LTR ERV1 1 90 -773 3585 188 98 29 chr17 6386892 6387159 -79051321 + MER21B LTR ERV1 19 266 -597 2377 94 3 0 chr17 6387159 6387467 -79051013 + AluSp SINE Alu 1 309 -4 3585 188 98 29 chr17 6387467 6387988 -79050492 + MER21B LTR ERV1 266 861 -2 2281 111 0 3 chr17 6388285 6388583 -79049897 + AluSx SINE Alu 1 297 -15 2242 55 0 4 chr17 6388752 6389023 -79049457 - AluSg SINE Alu -40 270 1 2278 92 0 0 chr17 6389747 6390062 -79048418 + AluSx SINE Alu 1 315 0 2072 111 48 3 chr17 6390499 6390788 -79047692 + AluSx SINE Alu 1 302 -10 883 143 12 20 chr17 6390822 6391066 -79047414 + GA-rich Low_complexity Low_complexity 1 242 0 442 261 85 20 chr17 6391188 6391341 -79047139 + L1ME3A LINE L1 5989 6151 -19 1787 170 0 0 chr17 6391341 6391630 -79046850 - AluJo SINE Alu -19 293 5 342 185 46 0 chr17 6391758 6391823 -79046657 - HsTC2 DNA Tc2 -3 1895 1828 533 335 62 21 chr17 6391961 6392298 -79046182 + L1MC/D LINE L1 5292 5642 -2166 216 97 0 0 chr17 6392325 6392356 -79046124 + (TA)n Simple_repeat Simple_repeat 1 31 0 507 312 55 18 chr17 6395701 6395919 -79042561 - L2 LINE L2 -427 2887 2662 321 26 0 0 chr17 6396444 6396482 -79041998 + (CA)n Simple_repeat Simple_repeat 1 38 0 220 224 68 60 chr17 6396962 6397109 -79041371 - L3 LINE CR1 -16 1561 1338 2272 119 7 0 chr17 6397292 6397595 -79040885 + AluSx SINE Alu 1 305 -7 1705 149 91 0 chr17 6397632 6397908 -79040572 - AluSx SINE Alu -11 301 1 320 273 73 9 chr17 6398531 6398641 -79039839 + MER5C DNA MER1_type 5 121 -203 355 181 19 67 chr17 6398653 6398758 -79039722 + MER5C DNA MER1_type 225 324 0 255 345 6 6 chr17 6401330 6401504 -79036976 - L1ME LINE L1 -364 5757 5584 1494 156 0 13 chr17 6401803 6402055 -79036425 + AluSx SINE Alu 61 309 0 1059 211 97 20 chr17 6402067 6402365 -79036115 + L1MC4 LINE L1 5296 5616 -2192 342 186 72 10 chr17 6402370 6402467 -79036013 - MER50 LTR ERV1 -150 584 482 5326 201 71 76 chr17 6402467 6403792 -79034688 + L1MC4 LINE L1 5620 6951 -1044 225 0 0 0 chr17 6403792 6403817 -79034663 + (TTTA)n Simple_repeat Simple_repeat 4 28 0 1899 102 0 67 chr17 6403825 6404108 -79034372 - AluSx SINE Alu -48 264 1 5326 201 71 76 chr17 6404108 6405230 -79033250 + L1MC4 LINE L1 6958 7993 -2 2974 206 36 16 chr17 6405241 6405935 -79032545 + L1ME2 LINE L1 5431 6138 -26 2476 90 0 3 chr17 6405999 6406310 -79032170 - AluSx SINE Alu -2 310 1 622 321 62 35 chr17 6406555 6406895 -79031585 + L1MC4 LINE L1 7694 8042 0 201 74 0 0 chr17 6408406 6408433 -79030047 + (CA)n Simple_repeat Simple_repeat 2 28 0 440 258 101 22 chr17 6415524 6415703 -79022777 + MIR SINE MIR 49 256 -6 260 300 13 24 chr17 6416745 6416839 -79021641 - MIR SINE MIR -67 141 48 3001 220 131 12 chr17 6417007 6417968 -79020512 + L1MC4 LINE L1 6393 7467 -575 779 246 135 3 chr17 6417955 6418244 -79020236 + L1MD3 LINE L1 7657 7983 -12 * 4046 175 47 56 chr17 6418289 6419267 -79019213 + LTR5 LTR ERVK 1 969 0 271 233 0 0 chr17 6419271 6419331 -79019149 - MER113 DNA MER1_type? -458 63 4 443 262 248 0 chr17 6419342 6419483 -79018997 - MER5A DNA MER1_type 0 189 14 333 270 0 0 chr17 6419665 6419739 -79018741 + MIR SINE MIR 68 141 -121 581 267 154 60 chr17 6419816 6420296 -79018184 + L3 LINE CR1 726 1250 -327 545 272 28 11 chr17 6420356 6420536 -79017944 - Charlie8 DNA MER1_type -2187 230 48 529 267 191 11 chr17 6420571 6420844 -79017636 + L3 LINE CR1 1254 1575 -2 204 67 0 0 chr17 6421113 6421143 -79017337 + (T)n Simple_repeat Simple_repeat 1 30 0 295 234 0 0 chr17 6421250 6421314 -79017166 + MIR SINE MIR 185 248 -14 793 273 42 87 chr17 6421459 6421814 -79016666 - L2 LINE L2 -446 2868 2530 1969 51 0 8 chr17 6422810 6423047 -79015433 + AluY SINE Alu 67 301 -10 1079 267 89 23 chr17 6424841 6424875 -79013605 - L2 LINE L2 -17 3296 3266 2296 115 46 0 chr17 6424875 6425224 -79013256 - MER47A DNA MER2_type -1 365 1 1079 267 89 23 chr17 6425224 6425791 -79012689 - L2 LINE L2 -47 3266 2670 988 149 12 133 chr17 6425797 6426046 -79012434 + MER20 DNA MER1_type 1 219 0 205 103 0 0 chr17 6427407 6427436 -79011044 + MIR SINE MIR 224 252 -10 203 354 0 0 chr17 6427856 6427938 -79010542 + C-rich Low_complexity Low_complexity 6 87 0 209 103 0 0 chr17 6428228 6428257 -79010223 + MIR SINE MIR 224 252 -10 2367 100 0 0 chr17 6430098 6430389 -79008091 + AluSc SINE Alu 2 292 -17 430 284 2 24 chr17 6431161 6431313 -79007167 + MIR SINE MIR 16 160 -48 1824 146 3 48 chr17 6431326 6431635 -79006845 + AluJb SINE Alu 1 295 -17 446 0 19 0 chr17 6431701 6431755 -79006725 + (TC)n Simple_repeat Simple_repeat 2 56 0 205 214 233 10 chr17 6431926 6432029 -79006451 - MIR3 SINE MIR -75 133 8 205 284 0 15 chr17 6432951 6433018 -79005462 + G-rich Low_complexity Low_complexity 2 67 0 744 280 19 25 chr17 6433344 6433652 -79004828 - L1MEc LINE L1 -5966 430 44 980 149 14 0 chr17 6433907 6434114 -79004366 - AluSx SINE Alu 0 349 141 652 99 0 0 chr17 6434114 6434195 -79004285 - AluSx SINE Alu -231 82 2 455 178 140 46 chr17 6434342 6434598 -79003882 + LTR50 LTR ERVL 216 586 -209 280 244 99 45 chr17 6434614 6434815 -79003665 - L1M4 LINE L1 -747 5399 5188 421 187 75 0 chr17 6434948 6435055 -79003425 - MER112 DNA MER1_type -6 254 140 185 105 0 53 chr17 6435089 6435127 -79003353 + (GGAA)n Simple_repeat Simple_repeat 4 39 0 1945 91 76 0 chr17 6435141 6435433 -79003047 - AluSx SINE Alu 0 312 1 242 239 76 65 chr17 6436190 6436282 -79002198 - MIR3 SINE MIR -35 173 81 2406 94 0 0 chr17 6436407 6436705 -79001775 + AluSc SINE Alu 1 298 -11 2209 173 66 12 chr17 6436915 6437325 -79001155 + MSTB1 LTR MaLR 1 432 0 2157 118 0 37 chr17 6437553 6437874 -79000606 - AluSx SINE Alu -3 309 1 281 100 0 0 chr17 6437874 6437914 -79000566 - Alu SINE Alu -259 41 2 250 188 318 0 chr17 6437915 6438000 -79000480 - MER112 DNA MER1_type -141 119 8 1811 121 38 11 chr17 6438384 6438648 -78999832 - AluSx SINE Alu -41 271 1 680 245 159 14 chr17 6438674 6438882 -78999598 - MIR SINE MIR -10 252 15 248 254 208 25 chr17 6438953 6439150 -78999330 + L3 LINE CR1 1146 1378 -199 2334 98 0 0 chr17 6439181 6439476 -78999004 + AluSg SINE Alu 1 295 -15 2168 127 3 3 chr17 6440355 6440662 -78997818 - AluSg SINE Alu -3 307 1 553 258 108 27 chr17 6440667 6440853 -78997627 + L2 LINE L2 3113 3313 0 191 302 18 113 chr17 6440956 6441178 -78997302 + L2 LINE L2 2976 3176 -96 184 250 29 114 chr17 6441474 6441614 -78996866 - L2 LINE L2 -5 3267 3140 2384 97 13 0 chr17 6442195 6442494 -78995986 - AluSx SINE Alu -9 303 1 707 316 22 26 chr17 6442582 6442895 -78995585 - L1ME LINE L1 -426 5695 5384 186 194 14 97 chr17 6443923 6443978 -78994502 - MIR3 SINE MIR -6 202 153 2491 79 0 3 chr17 6443978 6444283 -78994197 - AluSg SINE Alu -6 304 1 186 194 14 97 chr17 6444283 6444299 -78994181 - MIR3 SINE MIR -55 153 137 245 234 65 19 chr17 6444329 6444436 -78994044 - L1ME4a LINE L1 -11 6110 5999 467 293 115 5 chr17 6444490 6444681 -78993799 - L1ME4a LINE L1 -218 5903 5692 2078 120 0 17 chr17 6444682 6444981 -78993499 + AluSx SINE Alu 1 294 -18 1018 125 0 80 chr17 6444983 6445159 -78993321 + AluSg/x SINE Alu 136 297 -13 318 266 126 14 chr17 6445159 6445302 -78993178 - L1ME4a LINE L1 -412 5709 5551 294 278 106 100 chr17 6445461 6445554 -78992926 - MIR SINE MIR -62 200 104 2419 74 0 35 chr17 6445554 6445865 -78992615 + AluSq SINE Alu 1 300 -13 294 278 106 100 chr17 6445865 6445951 -78992529 - MIR SINE MIR -158 104 20 302 259 82 83 chr17 6447231 6447428 -78991052 - MIR SINE MIR -37 225 35 183 284 198 0 chr17 6447784 6447865 -78990615 + L2 LINE L2 3162 3258 -14 183 294 103 0 chr17 6447975 6448043 -78990437 + L2 LINE L2 3149 3223 -49 216 97 0 0 chr17 6448098 6448129 -78990351 + (CA)n Simple_repeat Simple_repeat 1 31 0 494 262 70 60 chr17 6450499 6450791 -78987689 - L2 LINE L2 -69 3244 2947 1051 207 4 40 chr17 6450791 6451018 -78987462 + MER20 DNA MER1_type 1 219 0 180 0 0 0 chr17 6451075 6451095 -78987385 + (T)n Simple_repeat Simple_repeat 1 20 0 656 172 37 15 chr17 6451294 6451428 -78987052 + AluSg/x SINE Alu 135 271 -39 335 291 99 0 chr17 6451450 6451591 -78986889 + L1MC/D LINE L1 5655 5809 -1999 2396 47 0 7 chr17 6451593 6451871 -78986609 + AluY SINE Alu 17 292 -19 1598 216 100 10 chr17 6451899 6452381 -78986099 + L1ME2 LINE L1 5633 6157 -7 2005 65 4 0 chr17 6452402 6452649 -78985831 - AluY SINE Alu -63 248 1 2035 115 21 7 chr17 6453490 6453777 -78984703 - AluSg1 SINE Alu -18 291 1 259 183 133 0 chr17 6454484 6454544 -78983936 - MIR3 SINE MIR -29 179 112 810 282 103 46 chr17 6454771 6455335 -78983145 + MLT1L LTR MaLR 6 601 -14 223 337 32 11 chr17 6455356 6455451 -78983029 - MIR3 SINE MIR -102 106 10 441 315 22 28 chr17 6456312 6456490 -78981990 + MIR SINE MIR 20 196 -66 279 333 79 9 chr17 6458659 6458773 -78979707 - L3 LINE CR1 -1271 306 185 297 254 0 0 chr17 6459792 6459851 -78978629 - L2 LINE L2 -4 3309 3251 267 208 0 0 chr17 6460058 6460111 -78978369 + L2 LINE L2 3261 3313 0 420 245 7 0 chr17 6460171 6460311 -78978169 + L1ME4a LINE L1 5685 5828 -293 2435 76 0 3 chr17 6460392 6460683 -78977797 + AluSq SINE Alu 1 290 -23 686 269 108 11 chr17 6460824 6461110 -78977370 - L1ME4a LINE L1 -248 5873 5560 306 0 0 0 chr17 6461967 6462001 -78976479 + (A)n Simple_repeat Simple_repeat 1 34 0 442 336 36 38 chr17 6462868 6463285 -78975195 + L2 LINE L2 2097 2512 -802 373 310 66 10 chr17 6463377 6463574 -78974906 - L2 LINE L2 -1103 2211 2004 269 349 38 9 chr17 6463900 6464006 -78974474 + L2 LINE L2 3133 3241 -31 1368 105 4 0 chr17 6464011 6464261 -78974219 + (TGGA)n Simple_repeat Simple_repeat 1 251 0 226 296 102 11 chr17 6464261 6464349 -78974131 - L2 LINE L2 0 3313 3218 226 370 73 12 chr17 6464723 6464888 -78973592 - L2 LINE L2 0 3272 3098 468 0 0 0 chr17 6465084 6465136 -78973344 + (CA)n Simple_repeat Simple_repeat 2 53 0 629 313 103 17 chr17 6465165 6465698 -78972782 + L1ME4a LINE L1 5405 5983 -138 2271 92 24 3 chr17 6466242 6466534 -78971946 + AluSg SINE Alu 1 298 -12 2305 103 0 3 chr17 6467296 6467596 -78970884 - AluSx SINE Alu -13 299 1 830 292 4 26 chr17 6470487 6470661 -78967819 + MIR SINE MIR 35 204 -58 2117 122 0 25 chr17 6470661 6471027 -78967453 + AluSx SINE Alu 1 312 0 830 292 4 26 chr17 6471027 6471085 -78967395 + MIR SINE MIR 204 262 0 209 222 0 0 chr17 6471316 6471361 -78967119 + (TTA)n Simple_repeat Simple_repeat 2 46 0 2384 94 0 0 chr17 6471379 6471676 -78966804 - AluSx SINE Alu -15 297 1 1138 82 0 0 chr17 6471676 6471811 -78966669 - AluSq/x SINE Alu -178 135 1 231 224 167 32 chr17 6472642 6472798 -78965682 - L2 LINE L2 -238 3034 2858 2249 104 3 0 chr17 6473335 6473634 -78964846 + AluSg SINE Alu 1 300 -10 237 180 0 0 chr17 6476122 6476172 -78962308 + CT-rich Low_complexity Low_complexity 2 51 0 293 270 73 73 chr17 6476607 6476907 -78961573 + L2 LINE L2 2949 3248 -24 573 308 59 0 chr17 6477741 6477957 -78960523 + MIR SINE MIR 7 246 -16 204 214 0 0 chr17 6479259 6479301 -78959179 + CT-rich Low_complexity Low_complexity 1 42 0 383 185 50 8 chr17 6479385 6479504 -78958976 + GA-rich Low_complexity Low_complexity 3 126 0 21 0 0 0 chr17 6479525 6479546 -78958934 + AT_rich Low_complexity Low_complexity 1 21 0 957 155 0 0 chr17 6479573 6479816 -78958664 + L1PB3 LINE L1 5859 6151 -3 2166 112 17 0 chr17 6479877 6480173 -78958307 - AluSq SINE Alu -12 301 1 3036 173 17 6 chr17 6480335 6480877 -78957603 - MER6A DNA MER2_type 0 605 58 713 151 0 0 chr17 6480888 6481007 -78957473 - AluJb SINE Alu -4 308 190 370 152 0 80 chr17 6481008 6481083 -78957397 - MER6 DNA MER2_type -82 62 -1 2285 96 0 0 chr17 6481150 6481473 -78957007 - AluSc SINE Alu 0 323 1 781 201 69 0 chr17 6481723 6481897 -78956583 - MER20 DNA MER1_type 0 219 34 677 236 55 0 chr17 6482078 6482243 -78956237 + MER97b DNA MER1_type? 5 178 -875 225 0 0 0 chr17 6482668 6482693 -78955787 + (TG)n Simple_repeat Simple_repeat 2 26 0 21 57 0 0 chr17 6482851 6482886 -78955594 + AT_rich Low_complexity Low_complexity 1 35 0 264 59 0 0 chr17 6483334 6483368 -78955112 + (CA)n Simple_repeat Simple_repeat 2 35 0 825 122 0 20 chr17 6483392 6483641 -78954839 + (TG)n Simple_repeat Simple_repeat 1 243 0 305 221 126 11 chr17 6483977 6484072 -78954408 - MIR SINE MIR -62 146 41 23 68 0 0 chr17 6485348 6485392 -78953088 + GC_rich Low_complexity Low_complexity 1 44 0 218 307 13 0 chr17 6486152 6486227 -78952253 - L2 LINE L2 -11 3261 3186 766 143 33 91 chr17 6486669 6486800 -78951680 - L1MA6 LINE L1 0 6300 6184 2409 97 0 6 chr17 6486800 6487111 -78951369 - AluSx SINE Alu -3 309 1 766 143 33 91 chr17 6487111 6487189 -78951291 - L1MA6 LINE L1 -116 6184 6103 4754 54 29 2 chr17 6487337 6487966 -78950514 - L1PA8 LINE L1 0 6172 5527 564 292 75 18 chr17 6488010 6488236 -78950244 + MIR SINE MIR 21 259 -3 621 78 0 49 chr17 6488327 6488429 -78950051 + AluY SINE Alu 208 304 -7 596 273 116 29 chr17 6488553 6488898 -78949582 + L1M4 LINE L1 4495 4869 -1277 1315 181 24 74 chr17 6488912 6489037 -78949443 + Charlie2a DNA MER1_type 1011 1141 -1721 2410 77 0 48 chr17 6489037 6489349 -78949131 - AluSg SINE Alu -13 297 1 1315 181 24 74 chr17 6489349 6489644 -78948836 + Charlie2a DNA MER1_type 1141 1410 -1452 1855 174 106 26 chr17 6489663 6490088 -78948392 + LTR2B LTR ERV1 32 490 0 249 200 67 13 chr17 6490418 6490493 -78947987 + L1MD3 LINE L1 7905 7983 -12 22 0 0 0 chr17 6490555 6490577 -78947903 + AT_rich Low_complexity Low_complexity 1 22 0 2266 110 10 0 chr17 6490577 6490887 -78947593 - AluSq SINE Alu 0 313 1 1058 149 199 10 chr17 6490938 6491139 -78947341 + AluJb SINE Alu 1 239 -73 358 328 64 17 chr17 6491604 6491816 -78946664 - MLT1H LTR MaLR -150 264 65 1086 250 37 10 chr17 6492003 6492299 -78946181 + Charlie2a DNA MER1_type 1475 1778 -1084 705 145 0 0 chr17 6492299 6492416 -78946064 + FRAM SINE Alu 52 168 -8 25 0 0 0 chr17 6492563 6492588 -78945892 + AT_rich Low_complexity Low_complexity 1 25 0 2276 99 0 0 chr17 6493147 6493439 -78945041 - AluSc SINE Alu -16 293 2 3347 241 102 35 chr17 6493627 6494388 -78944092 + L2 LINE L2 1631 2340 -973 2100 106 29 4 chr17 6494388 6494662 -78943818 + AluSx SINE Alu 1 281 -31 3347 241 102 35 chr17 6494662 6494986 -78943494 + L2 LINE L2 2340 2641 -672 2493 115 20 54 chr17 6494986 6495229 -78943251 - MSTA LTR MaLR 0 428 178 2271 117 0 7 chr17 6495229 6495537 -78942943 - AluSg SINE Alu -4 306 1 2493 115 20 54 chr17 6495537 6495549 -78942931 - MSTA LTR MaLR -250 178 167 2530 71 0 3 chr17 6495549 6495858 -78942622 - AluY SINE Alu -3 308 1 2493 115 20 54 chr17 6495858 6496044 -78942436 - MSTA LTR MaLR -261 167 1 3347 241 102 35 chr17 6496044 6496284 -78942196 + L2 LINE L2 2641 2864 -449 2372 94 3 3 chr17 6496284 6496582 -78941898 + AluSx SINE Alu 1 298 -14 6874 45 7 2 chr17 6496583 6497773 -78940707 + L1PA6 LINE L1 4960 6152 -2 3347 241 102 35 chr17 6497773 6498023 -78940457 + L2 LINE L2 2863 3312 -1 300 137 0 0 chr17 6499354 6499405 -78939075 + (TA)n Simple_repeat Simple_repeat 2 52 0 22 35 0 0 chr17 6499413 6499442 -78939038 + AT_rich Low_complexity Low_complexity 1 29 0 203 232 62 0 chr17 6499444 6499556 -78938924 + (TA)n Simple_repeat Simple_repeat 2 120 0 910 220 11 0 chr17 6499556 6499733 -78938747 - AluJo SINE Alu -17 295 117 925 113 7 7 chr17 6499764 6499906 -78938574 - L1MB8 LINE L1 -11 6167 6026 354 137 0 0 chr17 6499906 6499957 -78938523 + L1 LINE L1 17 67 -7498 18819 165 48 38 chr17 6500111 6502070 -78936410 + L1 LINE L1 16 1954 -5611 340 60 0 8 chr17 6502070 6502121 -78936359 + MER4E LTR ERV1 653 692 -74 18819 165 48 38 chr17 6502121 6504867 -78933613 + L1 LINE L1 1954 4821 -2744 14525 157 94 84 chr17 6504870 6508925 -78929555 - HERVH LTR ERV1 -3619 4094 1 1226 171 129 89 chr17 6508932 6509358 -78929122 - LTR7 LTR ERV1 -7 443 1 3012 211 8 3 chr17 6509358 6510016 -78928464 + L1 LINE L1 5755 6415 -1150 933 88 0 0 chr17 6510017 6510130 -78928350 + AluY SINE Alu 1 113 -198 1824 186 121 38 chr17 6510347 6510794 -78927686 - LTR2B LTR ERV1 0 490 7 3208 246 192 42 chr17 6510813 6512650 -78925830 - HAL1 LINE L1 -145 2362 252 1895 251 76 44 chr17 6512660 6512978 -78925502 + L2 LINE L2 2286 2592 -721 2016 73 4 0 chr17 6512978 6513238 -78925242 + L1PA8 LINE L1 5912 6172 0 1895 251 76 44 chr17 6513238 6513847 -78924633 + L2 LINE L2 2592 3254 -59 5731 137 9 17 chr17 6513849 6515195 -78923285 + L1MA3 LINE L1 4333 5668 -637 3749 204 53 4 chr17 6515198 6515894 -78922586 + L1PA12 LINE L1 1 730 -6851 * 5647 144 24 19 chr17 6515890 6516839 -78921641 + L1PA13 LINE L1 4379 5342 -821 2427 96 0 0 chr17 6516839 6517151 -78921329 - AluSx SINE Alu 0 312 1 5647 144 24 19 chr17 6517151 6517958 -78920522 + L1PA13 LINE L1 5342 6143 -20 4243 109 15 14 chr17 6517972 6518466 -78920014 + L1MA3 LINE L1 5652 6152 -153 2274 67 3 11 chr17 6518466 6518792 -78919688 + AluY SINE Alu 1 324 0 4243 109 15 14 chr17 6518792 6518947 -78919533 + L1MA3 LINE L1 6152 6305 0 1911 221 81 109 chr17 6518996 6519447 -78919033 + L1ME LINE L1 503 965 -5575 642 151 0 0 chr17 6519447 6519553 -78918927 + L1MA4 LINE L1 6180 6285 -15 1911 221 81 109 chr17 6519553 6519602 -78918878 + L1ME LINE L1 965 1014 -5526 2355 91 0 0 chr17 6519602 6519900 -78918580 - AluSg SINE Alu -12 298 1 1911 221 81 109 chr17 6519900 6520913 -78917567 + L1ME LINE L1 1014 1970 -4570 1988 152 3 0 chr17 6520913 6521232 -78917248 + AluSx SINE Alu 1 312 0 300 214 18 0 chr17 6521325 6521381 -78917099 + MER77 LTR ERV1 292 348 -257 555 238 26 16 chr17 6521420 6521609 -78916871 + L1ME LINE L1 2397 2587 -3953 297 0 0 0 chr17 6522348 6522381 -78916099 + (CA)n Simple_repeat Simple_repeat 2 34 0 600 284 26 0 chr17 6522991 6523146 -78915334 + MER63 DNA MER1_type 1 785 -277 2341 110 0 0 chr17 6523150 6523489 -78914991 + AluSg1 SINE Alu 1 339 0 1265 219 64 0 chr17 6523841 6524106 -78914374 + AluJo SINE Alu 1 282 -30 2373 80 7 3 chr17 6526089 6526391 -78912089 - AluY SINE Alu -8 303 1 2482 86 0 0 chr17 6526392 6526693 -78911787 - AluSg SINE Alu -9 301 1 200 326 184 0 chr17 6526884 6526982 -78911498 + MIR SINE MIR 15 130 -132 205 248 171 19 chr17 6527030 6527135 -78911345 + MIR SINE MIR 116 236 -26 2296 93 3 37 chr17 6528884 6529208 -78909272 - AluSq SINE Alu 0 313 1 32 43 0 0 chr17 6529509 6529555 -78908925 + AT_rich Low_complexity Low_complexity 1 46 0 575 209 25 61 chr17 6529580 6529776 -78908704 - L1ME1 LINE L1 -6 6160 5972 252 0 0 0 chr17 6531668 6531696 -78906784 + (TG)n Simple_repeat Simple_repeat 2 29 0 2486 76 0 0 chr17 6532106 6532407 -78906073 + AluSg SINE Alu 1 301 -9 2408 72 3 0 chr17 6532911 6533202 -78905278 + AluSp SINE Alu 1 292 -21 243 0 0 0 chr17 6533759 6533786 -78904694 + (CACAA)n Simple_repeat Simple_repeat 3 29 0 295 221 147 22 chr17 6535040 6535176 -78903304 + Charlie8 DNA MER1_type 84 236 -2181 2081 107 4 4 chr17 6535978 6536283 -78902197 + AluSg SINE Alu 1 305 0 803 214 77 72 chr17 6536384 6536785 -78901695 - L1MC5 LINE L1 -54 7907 7505 24 0 0 0 chr17 6536995 6537019 -78901461 + AT_rich Low_complexity Low_complexity 1 24 0 7378 31 0 0 chr17 6537032 6538395 -78900085 - L1PA4 LINE L1 0 6155 4769 268 274 21 0 chr17 6538859 6538954 -78899526 + MIR SINE MIR 47 143 -119 623 256 53 19 chr17 6539021 6539228 -78899252 - MIR SINE MIR 0 262 49 3735 45 0 0 chr17 6539430 6539877 -78898603 - L1PA8 LINE L1 -5 6167 5721 422 302 105 12 chr17 6540754 6540926 -78897554 + MIR3 SINE MIR 19 206 -2 460 252 24 155 chr17 6541659 6542040 -78896440 + L2 LINE L2 2904 3234 -38 15661 152 15 24 chr17 6544152 6547270 -78891210 + L1MA3 LINE L1 2950 6007 -1717 225 0 0 0 chr17 6547270 6547295 -78891185 + (TG)n Simple_repeat Simple_repeat 2 26 0 15661 152 15 24 chr17 6547295 6548822 -78889658 + L1MA3 LINE L1 6007 7547 -177 1812 220 74 16 chr17 6549395 6549744 -78888736 - L1MB5 LINE L1 0 6174 5794 2051 84 0 15 chr17 6549744 6550017 -78888463 - AluSx SINE Alu -8 304 36 1812 220 74 16 chr17 6550017 6550099 -78888381 - L1MB5 LINE L1 -380 5794 5718 529 215 8 24 chr17 6550099 6550232 -78888248 + MER5A DNA MER1_type 4 119 -59 215 267 0 80 chr17 6550264 6550339 -78888141 - MER5B DNA MER1_type -4 174 106 227 198 264 24 chr17 6550512 6550604 -78887876 + MIR SINE MIR 40 150 -62 562 247 9 92 chr17 6550624 6550851 -78887629 + L2 LINE L2 1422 1629 -1685 2688 243 171 47 chr17 6551089 6551552 -78886928 + L2 LINE L2 1699 2104 -1209 2367 92 0 0 chr17 6551552 6551857 -78886623 + AluY SINE Alu 1 305 -6 2688 243 171 47 chr17 6551857 6552731 -78885749 + L2 LINE L2 2104 3186 -127 1412 222 66 36 chr17 6552754 6553255 -78885225 - HAL1 LINE L1 -78 2429 1914 703 222 30 30 chr17 6553298 6553465 -78885015 - HAL1 LINE L1 -706 1801 1635 464 208 0 28 chr17 6553519 6553625 -78884855 + L1MA5 LINE L1 6198 6300 0 302 374 17 0 chr17 6553812 6553927 -78884553 + HAL1 LINE L1 1464 1580 -927 336 287 93 20 chr17 6553958 6554108 -78884372 - L1MC5 LINE L1 -152 7809 7649 267 31 0 0 chr17 6554154 6554186 -78884294 + (CTG)n Simple_repeat Simple_repeat 2 33 0 2149 135 3 3 chr17 6554531 6554843 -78883637 - AluSx SINE Alu 0 312 1 1551 247 74 108 chr17 6554883 6555702 -78882778 - L1MEd LINE L1 -744 1746 904 994 100 20 0 chr17 6555702 6555852 -78882628 + L1MA7 LINE L1 6135 6287 -4 1551 247 74 108 chr17 6555852 6556438 -78882042 - L1MEd LINE L1 -1586 904 300 1233 186 138 63 chr17 6556528 6556862 -78881618 - MLT1A1 LTR MaLR -6 359 1 324 248 71 9 chr17 6556893 6557006 -78881474 - L1MEd LINE L1 -5981 138 19 208 368 66 0 chr17 6557623 6557729 -78880751 + L2 LINE L2 3160 3272 0 * 316 295 57 0 chr17 6557721 6557826 -78880654 - MIR3 SINE MIR -30 178 68 219 258 297 45 chr17 6557926 6558081 -78880399 - MIR SINE MIR 0 262 69 688 142 219 19 chr17 6558643 6558798 -78879682 + MER53 DNA DNA 1 186 -3 2292 99 3 3 chr17 6558892 6559196 -78879284 - AluSx SINE Alu -7 305 2 6660 176 19 16 chr17 6559727 6561009 -78877471 + L1P4 LINE L1 3870 5155 -991 1169 139 0 0 chr17 6561005 6561185 -78877295 + L1P4 LINE L1 5603 5782 -383 * 949 103 0 0 chr17 6561185 6561311 -78877169 + AluSq/x SINE Alu 1 126 -187 218 316 18 44 chr17 6561506 6561620 -78876860 + MIR SINE MIR 151 261 -1 239 295 259 7 chr17 6562064 6562203 -78876277 + MIR3 SINE MIR 28 201 -7 331 262 144 55 chr17 6562695 6562897 -78875583 + MIR SINE MIR 12 231 -31 296 262 10 29 chr17 6563851 6563954 -78874526 - MIR SINE MIR -41 221 121 400 184 41 51 chr17 6563962 6564060 -78874420 + MIR SINE MIR 38 134 -128 2286 103 3 22 chr17 6565164 6565483 -78872997 + AluSq SINE Alu 1 313 0 324 243 10 29 chr17 6566537 6566640 -78871840 - MIR SINE MIR -41 221 121 367 179 44 45 chr17 6566648 6566746 -78871734 + MIR SINE MIR 39 135 -73 375 297 125 1 chr17 6567071 6567282 -78871198 + MIR SINE MIR 16 250 -12 2055 115 44 0 chr17 6567394 6567689 -78870791 + AluSq SINE Alu 3 310 -3 821 196 0 19 chr17 6567709 6567778 -78870702 - AluJb SINE Alu 0 361 292 1030 93 6 27 chr17 6567778 6567961 -78870519 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 821 196 0 19 chr17 6567961 6568098 -78870382 - AluJb SINE Alu -69 292 158 190 163 0 47 chr17 6568115 6568158 -78870322 - MIR SINE MIR 0 262 222 240 308 0 0 chr17 6568207 6568272 -78870208 - L2 LINE L2 -207 3065 3001 244 340 100 30 chr17 6568445 6568716 -78869764 - L2 LINE L2 -646 2668 2379 2131 123 13 3 chr17 6568736 6569037 -78869443 + AluSx SINE Alu 1 304 -8 331 88 0 32 chr17 6569441 6569504 -78868976 - FAM SINE Alu -8 171 116 2905 39 0 0 chr17 6569524 6569880 -78868600 - L1P LINE L1 -803 5343 4988 993 27 0 0 chr17 6569880 6569985 -78868495 + L1PA5 LINE L1 6040 6149 -5 545 284 142 0 chr17 6571191 6571402 -78867078 + MIR SINE MIR 10 250 -12 344 274 103 17 chr17 6571483 6571600 -78866880 + MIR SINE MIR 19 145 -63 317 313 45 0 chr17 6571660 6571772 -78866708 - MIR SINE MIR -123 139 23 2015 136 4 0 chr17 6572206 6572486 -78865994 + AluSx SINE Alu 1 281 -31 6014 65 22 12 chr17 6572486 6573243 -78865237 + MER4E LTR ERV1 2 766 0 38165 48 0 1 chr17 6573714 6578327 -78860153 - L1P LINE L1 -1535 4611 2 32 26 0 0 chr17 6578483 6578522 -78859958 + AT_rich Low_complexity Low_complexity 1 39 0 364 309 0 0 chr17 6578619 6578703 -78859777 + Cheshire DNA MER1_type 1 84 -2336 6060 131 45 38 chr17 6578704 6578936 -78859544 - L1MC2 LINE L1 -12 6332 6103 2182 130 10 0 chr17 6578936 6579244 -78859236 - AluSx SINE Alu -1 311 1 6060 131 45 38 chr17 6579244 6580149 -78858331 - L1MC2 LINE L1 -241 6103 5188 1064 248 90 3 chr17 6580152 6580442 -78858038 + Cheshire DNA MER1_type 77 391 -2029 2309 81 0 26 chr17 6580446 6580755 -78857725 - AluSq SINE Alu -12 301 1 225 0 0 0 chr17 6580938 6580963 -78857517 + (CAT)n Simple_repeat Simple_repeat 2 26 0 252 0 0 0 chr17 6581020 6581048 -78857432 + (TG)n Simple_repeat Simple_repeat 1 28 0 668 280 92 5 chr17 6581055 6581262 -78857218 - MIR SINE MIR -30 232 8 315 220 0 0 chr17 6581529 6581588 -78856892 - MER63 DNA MER1_type -89 747 689 2206 137 49 22 chr17 6581674 6582039 -78856441 + THE1C LTR MaLR 1 375 0 519 254 35 7 chr17 6582948 6583090 -78855390 - MIR SINE MIR -39 223 78 375 160 80 0 chr17 6583090 6583190 -78855290 + L1MC4 LINE L1 6982 7089 -953 510 231 162 48 chr17 6583219 6583265 -78855215 + L1ME3A LINE L1 5841 5880 -290 369 0 0 0 chr17 6583265 6583306 -78855174 + (CA)n Simple_repeat Simple_repeat 2 42 0 510 231 162 48 chr17 6583306 6583488 -78854992 + L1ME3A LINE L1 5880 6095 -75 495 184 10 19 chr17 6583495 6583598 -78854882 + MLT1E LTR MaLR 10 111 -482 6319 52 0 3 chr17 6584965 6585697 -78852783 - L1PA6 LINE L1 -5 6149 5420 22 0 0 0 chr17 6585731 6585753 -78852727 + AT_rich Low_complexity Low_complexity 1 22 0 2242 94 3 0 chr17 6585828 6586114 -78852366 + AluSp SINE Alu 5 291 -22 188 139 0 23 chr17 6586129 6586172 -78852308 + (TAA)n Simple_repeat Simple_repeat 3 44 0 329 248 256 15 chr17 6586185 6586318 -78852162 - MIR SINE MIR -19 243 79 638 240 69 6 chr17 6586423 6586598 -78851882 + MIR SINE MIR 63 248 -14 319 371 68 37 chr17 6586781 6587075 -78851405 - L2 LINE L2 -385 2929 2627 1422 212 156 47 chr17 6587272 6587702 -78850778 + MLT1J LTR MaLR 28 504 -7 231 250 0 0 chr17 6588343 6588403 -78850077 - HAL1 LINE L1 0 2507 2448 2291 77 0 3 chr17 6588433 6588718 -78849762 - AluY SINE Alu -27 284 1 596 221 107 50 chr17 6588737 6589035 -78849445 - HAL1 LINE L1 -182 2325 2011 24 0 0 0 chr17 6589101 6589125 -78849355 + AT_rich Low_complexity Low_complexity 1 24 0 2275 207 53 14 chr17 6589323 6589873 -78848607 - HAL1 LINE L1 -542 1965 1395 2206 154 30 14 chr17 6589915 6590284 -78848196 + THE1C LTR MaLR 1 375 0 3315 117 190 3 chr17 6590287 6590861 -78847619 + THE1C-int LTR MaLR 4 684 -896 1783 166 3 3 chr17 6590873 6591157 -78847323 - AluJo SINE Alu -18 294 11 1607 238 107 46 chr17 6591157 6591809 -78846671 - HAL1 LINE L1 -1226 1281 590 396 306 65 36 chr17 6591914 6592162 -78846318 - HAL1 LINE L1 -2139 368 114 272 333 67 0 chr17 6592245 6592335 -78846145 - HAL1 LINE L1 -2396 111 16 255 308 143 42 chr17 6592393 6592546 -78845934 + L2 LINE L2 1860 1996 -1318 2525 75 0 0 chr17 6592546 6592852 -78845628 - AluY SINE Alu -5 306 1 255 308 143 42 chr17 6592852 6593033 -78845447 + L2 LINE L2 1996 2228 -1086 197 308 55 22 chr17 6593406 6593497 -78844983 + L2 LINE L2 3177 3270 -2 525 341 64 47 chr17 6593506 6594022 -78844458 - L2 LINE L2 -898 2416 1892 221 305 98 12 chr17 6594123 6594205 -78844275 + L2 LINE L2 3141 3229 -43 2601 254 70 35 chr17 6594212 6595348 -78843132 - L1ME3A LINE L1 0 6170 5074 477 0 0 0 chr17 6595348 6595401 -78843079 + (TAGA)n Simple_repeat Simple_repeat 2 54 0 2601 254 70 35 chr17 6595401 6595430 -78843050 - L1ME3A LINE L1 -1096 5074 5047 2271 95 0 0 chr17 6595430 6595725 -78842755 - AluY SINE Alu -16 295 1 2601 254 70 35 chr17 6595725 6595988 -78842492 - L1ME3A LINE L1 -1123 5047 4794 2441 75 3 7 chr17 6595988 6596293 -78842187 - AluSq SINE Alu -9 304 1 2601 254 70 35 chr17 6596293 6596577 -78841903 - L1ME3A LINE L1 -1376 4794 4393 2203 123 0 0 chr17 6596671 6596972 -78841508 - AluY SINE Alu -8 303 3 1026 265 52 34 chr17 6597124 6597449 -78841031 + MER102b DNA MER1_type 11 341 0 2099 115 7 0 chr17 6597600 6597886 -78840594 + AluSx SINE Alu 1 288 -24 818 192 0 0 chr17 6598045 6598175 -78840305 + MER2 DNA MER2_type 6 135 -210 329 131 16 0 chr17 6598177 6598238 -78840242 + CT-rich Low_complexity Low_complexity 2 63 0 751 216 0 8 chr17 6598242 6598376 -78840104 - FLAM_A SINE Alu 0 133 1 612 83 0 0 chr17 6598378 6598462 -78840018 + MER2 DNA MER2_type 127 210 -135 198 297 142 39 chr17 6598555 6598710 -78839770 + L2 LINE L2 3143 3313 0 2087 203 115 12 chr17 6599182 6599694 -78838786 - L1ME3A LINE L1 -8 6162 5598 285 182 0 0 chr17 6599729 6599784 -78838696 + GA-rich Low_complexity Low_complexity 3 57 0 208 299 169 40 chr17 6599942 6600267 -78838213 - L3 LINE CR1 -162 1415 1049 293 301 96 15 chr17 6600694 6600830 -78837650 + MIR3 SINE MIR 29 175 -33 288 311 60 11 chr17 6601036 6601219 -78837261 + HAL1 LINE L1 1158 1349 -1158 828 175 19 31 chr17 6601278 6601438 -78837042 + MER2 DNA MER2_type 16 173 -172 188 46 0 161 chr17 6601477 6601564 -78836916 + (CAATA)n Simple_repeat Simple_repeat 2 74 0 369 250 0 0 chr17 6601660 6601736 -78836744 + MER2 DNA MER2_type 269 344 -1 421 315 160 18 chr17 6601841 6602184 -78836296 + HAL1 LINE L1 1526 1917 -590 601 183 76 8 chr17 6602286 6602417 -78836063 + FRAM SINE Alu 11 150 -26 22 35 0 0 chr17 6602417 6602446 -78836034 + AT_rich Low_complexity Low_complexity 1 29 0 869 154 0 0 chr17 6602486 6602616 -78835864 + FLAM_C SINE Alu 1 130 -3 263 310 70 20 chr17 6602866 6602966 -78835514 - L2 LINE L2 0 3272 3168 982 223 45 67 chr17 6602971 6603400 -78835080 + L1MC4a LINE L1 5593 6016 -105 446 296 133 26 chr17 6604689 6604915 -78833565 - MIR SINE MIR -4 258 9 791 218 19 28 chr17 6605563 6605774 -78832706 + L1MC4a LINE L1 5673 5881 -1927 278 53 0 26 chr17 6605784 6605822 -78832658 - FRAM/FAM SINE Alu -99 67 31 250 271 181 45 chr17 6605863 6606084 -78832396 + L1MC4a LINE L1 5918 6168 -1640 27 0 0 0 chr17 6606090 6606117 -78832363 + AT_rich Low_complexity Low_complexity 1 27 0 1432 153 12 81 chr17 6606660 6606980 -78831500 - AluJo SINE Alu -14 298 1 448 242 67 17 chr17 6606980 6607100 -78831380 + MIR SINE MIR 77 202 -60 1509 117 36 97 chr17 6607100 6607320 -78831160 - THE1C LTR MaLR 0 375 178 2408 96 0 0 chr17 6607320 6607621 -78830859 + AluSx SINE Alu 1 301 -11 1509 117 36 97 chr17 6607621 6607708 -78830772 - THE1C LTR MaLR -197 178 87 22 0 0 0 chr17 6608034 6608056 -78830424 + AT_rich Low_complexity Low_complexity 1 22 0 760 232 16 20 chr17 6608155 6608401 -78830079 - L1ME LINE L1 -5054 1016 772 1694 180 7 7 chr17 6608714 6609003 -78829477 - AluJb SINE Alu -23 289 1 22 35 0 0 chr17 6609389 6609418 -78829062 + AT_rich Low_complexity Low_complexity 1 29 0 2349 90 3 0 chr17 6609896 6610206 -78828274 + AluY SINE Alu 1 311 0 1189 249 28 82 chr17 6611162 6611732 -78826748 - MER34 LTR ERV1 -3 539 1 22 0 0 0 chr17 6612018 6612040 -78826440 + AT_rich Low_complexity Low_complexity 1 22 0 563 268 41 36 chr17 6612600 6612794 -78825686 - MIR SINE MIR -48 214 20 377 197 0 0 chr17 6613257 6613328 -78825152 - MIR SINE MIR -34 228 158 962 272 75 80 chr17 6613502 6614327 -78824153 + HAL1 LINE L1 2 1019 -1488 6891 53 10 0 chr17 6614333 6615671 -78822809 - L1PA7 LINE L1 0 6154 4801 2052 77 50 0 chr17 6615671 6615932 -78822548 + AluY SINE Alu 21 294 -17 13350 103 4 28 chr17 6615932 6618390 -78820090 - L1P3 LINE L1 -4009 2452 7 2420 145 36 19 chr17 6618892 6619089 -78819391 + MSTA LTR MaLR 1 193 -235 2570 144 44 2 chr17 6619089 6619500 -78818980 - MSTA LTR MaLR 0 428 1 2420 145 36 19 chr17 6619500 6619723 -78818757 + MSTA LTR MaLR 193 428 0 551 293 131 52 chr17 6620845 6620960 -78817520 - HAL1 LINE L1 -1709 798 693 2211 78 27 10 chr17 6620960 6621256 -78817224 - AluY SINE Alu -10 301 1 551 293 131 52 chr17 6621256 6621638 -78816842 - HAL1 LINE L1 -1814 693 262 2005 176 40 62 chr17 6621734 6621814 -78816666 - MSTB LTR MaLR 0 426 346 2083 87 4 0 chr17 6621814 6622080 -78816400 + AluSc SINE Alu 35 301 -8 2005 176 40 62 chr17 6622080 6622419 -78816061 - MSTB LTR MaLR -80 346 16 24 0 0 0 chr17 6622434 6622458 -78816022 + AT_rich Low_complexity Low_complexity 1 24 0 874 275 48 34 chr17 6622469 6622883 -78815597 + L1PBa LINE L1 135 554 -6309 904 226 43 4 chr17 6622909 6623139 -78815341 + L1PBa LINE L1 612 850 -6013 266 214 18 0 chr17 6623368 6623424 -78815056 - MER89-int LTR ERV1 -2166 2481 2425 641 147 121 17 chr17 6623437 6623553 -78814927 - FLAM_C SINE Alu -14 129 2 481 211 0 90 chr17 6624045 6624178 -78814302 - MER89-int LTR ERV1 -4076 860 740 385 304 52 55 chr17 6624622 6624911 -78813569 - MER89-int LTR ERV1 -3156 3645 3358 4142 133 44 5 chr17 6625613 6626250 -78812230 - L1PA15 LINE L1 -22 6143 5482 606 280 92 5 chr17 6626644 6626851 -78811629 + MIR SINE MIR 8 232 -30 252 0 0 0 chr17 6626858 6626886 -78811594 + (CA)n Simple_repeat Simple_repeat 1 28 0 225 0 0 0 chr17 6626943 6626968 -78811512 + (ATG)n Simple_repeat Simple_repeat 2 26 0 2648 24 7 0 chr17 6627151 6627447 -78811033 + AluY SINE Alu 1 298 -13 1151 151 5 11 chr17 6627452 6627638 -78810842 - Tigger3(Golem) DNA MER2_type -284 2745 2561 715 115 10 0 chr17 6627639 6627743 -78810737 + AluSg SINE Alu 2 106 -204 16021 215 27 29 chr17 6627843 6631624 -78806856 - L1PA13 LINE L1 -826 5971 2185 890 109 0 51 chr17 6631624 6631761 -78806719 - FLAM_C SINE Alu -3 130 1 16021 215 27 29 chr17 6631761 6632057 -78806423 - L1PA13 LINE L1 -4612 2185 1890 1756 123 88 0 chr17 6632057 6632206 -78806274 - AluSg1 SINE Alu -24 285 151 360 0 0 0 chr17 6632206 6632246 -78806234 + (TG)n Simple_repeat Simple_repeat 2 41 0 1756 123 88 0 chr17 6632246 6632356 -78806124 - AluSg1 SINE Alu -158 151 3 16021 215 27 29 chr17 6632356 6633029 -78805451 - L1PA13 LINE L1 -4907 1890 1180 1070 297 58 52 chr17 6633008 6633530 -78804950 - L1PA13 LINE L1 -5818 969 445 * 810 203 0 7 chr17 6633527 6633680 -78804800 - L1PA13 LINE L1 -6632 155 4 * 1350 226 69 64 chr17 6633777 6634359 -78804121 + LTR24B LTR ERV1 1 635 0 1104 262 46 40 chr17 6634359 6634959 -78803521 + LTR24B-int LTR ERV1 2 745 -4378 180 179 0 0 chr17 6635268 6635307 -78803173 + CT-rich Low_complexity Low_complexity 5 43 0 324 307 17 40 chr17 6635973 6636149 -78802331 + MER89-int LTR ERV1 3480 3651 -3440 1810 144 17 10 chr17 6636237 6636535 -78801945 - AluJo SINE Alu -12 300 1 327 277 43 11 chr17 6636605 6636699 -78801781 + MER89-int LTR ERV1 2538 2634 -4167 2524 4 0 15 chr17 6636866 6637140 -78801340 + AluYb8 SINE Alu 20 289 -29 2080 96 0 31 chr17 6637383 6637674 -78800806 + AluSq SINE Alu 1 282 -31 180 0 0 0 chr17 6637675 6637695 -78800785 + (TGAA)n Simple_repeat Simple_repeat 3 22 0 205 182 0 0 chr17 6638386 6638419 -78800061 + polypurine Low_complexity Low_complexity 1 33 0 469 118 0 0 chr17 6638842 6638910 -78799570 + LTR24B LTR ERV1 501 568 -8 2353 92 0 3 chr17 6639127 6639422 -78799058 - AluSc SINE Alu -15 294 1 3689 198 106 15 chr17 6639422 6640229 -78798251 - L1MC2 LINE L1 -13 6331 5428 1707 167 23 13 chr17 6640229 6640535 -78797945 - AluJb SINE Alu -3 309 1 3689 198 106 15 chr17 6640535 6640651 -78797829 - L1MC2 LINE L1 -916 5428 5324 2402 92 0 0 chr17 6640651 6640956 -78797524 - AluSx SINE Alu -7 305 1 1016 125 60 50 chr17 6640981 6641181 -78797299 - L1MB2 LINE L1 -2 6169 5968 844 172 27 59 chr17 6641181 6641367 -78797113 - LTR57 LTR ERVL 0 411 232 2400 71 0 7 chr17 6641411 6641706 -78796774 - AluY SINE Alu -18 293 1 990 92 48 121 chr17 6641772 6641979 -78796501 - L1MA2 LINE L1 -18 6286 6095 2517 65 0 10 chr17 6641992 6642301 -78796179 - AluY SINE Alu -5 306 1 1415 129 37 0 chr17 6642301 6642518 -78795962 - LTR57 LTR ERVL -186 225 1 2438 106 0 0 chr17 6644101 6644413 -78794067 + AluSx SINE Alu 1 312 0 193 305 98 12 chr17 6644782 6644864 -78793616 + L2 LINE L2 3141 3229 -43 408 72 9 0 chr17 6644902 6644968 -78793512 - MER51A LTR ERV1 -308 69 1 238 278 130 17 chr17 6645000 6645115 -78793365 + L1M4 LINE L1 4902 5029 -1117 25 31 0 0 chr17 6645303 6645335 -78793145 + AT_rich Low_complexity Low_complexity 1 32 0 1524 108 33 21 chr17 6645532 6645879 -78792601 + LTR46 LTR ERV1 1 404 -56 354 23 0 0 chr17 6645883 6645926 -78792554 + (TC)n Simple_repeat Simple_repeat 2 44 0 2382 94 3 0 chr17 6645929 6646236 -78792244 - AluSp SINE Alu -5 308 1 563 82 0 0 chr17 6646245 6646317 -78792163 - MER4E LTR ERV1 -282 497 426 1934 148 26 58 chr17 6646317 6646695 -78791785 + MER66B LTR ERV1 1 366 -120 1636 112 13 0 chr17 6646701 6646925 -78791555 + AluSg/x SINE Alu 78 304 -8 1683 171 27 0 chr17 6646932 6647224 -78791256 + MER4D LTR ERV1 604 903 0 320 123 62 0 chr17 6647629 6647694 -78790786 + L1MC2 LINE L1 6267 6335 -9 7928 21 0 2 chr17 6648127 6649534 -78788946 + L1PA3 LINE L1 4752 6155 0 24 32 0 0 chr17 6649934 6649965 -78788515 + AT_rich Low_complexity Low_complexity 1 31 0 387 172 0 0 chr17 6650605 6650669 -78787811 - MSTD LTR MaLR 0 396 333 2253 92 3 0 chr17 6650677 6650959 -78787521 + AluY SINE Alu 2 284 -27 1262 234 97 6 chr17 6650979 6651299 -78787181 - MSTD LTR MaLR -47 349 1 21 36 0 0 chr17 6651987 6652015 -78786465 + AT_rich Low_complexity Low_complexity 1 28 0 1496 159 90 34 chr17 6652164 6652594 -78785886 + LTR54 LTR ERV1 1 493 -5 1184 268 45 59 chr17 6652993 6653486 -78784994 - LTR33A LTR ERVL 0 523 38 797 199 17 6 chr17 6653532 6653708 -78784772 + L1MC4 LINE L1 7438 7615 -427 556 138 0 47 chr17 6653717 6653963 -78784517 + AluJ SINE Alu 11 294 -18 1067 256 73 42 chr17 6653964 6654348 -78784132 + L1MC4 LINE L1 7620 8019 -23 2078 127 0 3 chr17 6654348 6654640 -78783840 - AluSg SINE Alu -17 293 3 1067 256 73 42 chr17 6654640 6654665 -78783815 + L1MC4 LINE L1 8019 8042 0 629 270 90 69 chr17 6654880 6655115 -78783365 + MLT1H LTR MaLR 1 230 -365 5533 45 1 1 chr17 6655115 6655781 -78782699 + L1PA7 LINE L1 5483 6148 -6 629 270 90 69 chr17 6655781 6656004 -78782476 + MLT1H LTR MaLR 230 447 -148 2478 42 19 13 chr17 6656004 6656313 -78782167 - AluY SINE Alu 0 311 1 629 270 90 69 chr17 6656313 6656356 -78782124 + MLT1H LTR MaLR 447 488 -107 2308 138 14 6 chr17 6656356 6656719 -78781761 + MER47A DNA MER2_type 1 366 0 629 270 90 69 chr17 6656719 6656736 -78781744 + MLT1H LTR MaLR 488 588 -7 9952 195 90 16 chr17 6656864 6657471 -78781009 - L1M3c LINE L1 -835 6730 6169 2411 196 16 43 chr17 6657471 6657728 -78780752 - MER70A LTR ERVL 0 472 233 1897 122 79 0 chr17 6657728 6658007 -78780473 - AluSg SINE Alu -9 301 1 2411 196 16 43 chr17 6658007 6658234 -78780246 - MER70A LTR ERVL -239 233 1 9952 195 90 16 chr17 6658234 6659702 -78778778 - L1M3c LINE L1 -1396 6169 4810 189 0 0 0 chr17 6659702 6659723 -78778757 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 9952 195 90 16 chr17 6659723 6660376 -78778104 - L1M3c LINE L1 -2755 4810 4206 2371 90 0 0 chr17 6660376 6660675 -78777805 + AluSg1 SINE Alu 1 299 -10 9952 195 90 16 chr17 6660675 6661065 -78777415 - L1M3c LINE L1 -3359 4206 3207 1454 202 37 118 chr17 6661066 6661663 -78776817 - L1 LINE L1 -4171 3395 2719 270 0 0 0 chr17 6661665 6661695 -78776785 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 7353 11 2 0 chr17 6661695 6662511 -78775969 - L1PA3 LINE L1 -10 6145 5328 498 213 25 0 chr17 6662484 6662606 -78775874 - L1M3c LINE L1 -4555 2941 2817 * 537 306 117 20 chr17 6662711 6662959 -78775521 - L1M3c LINE L1 -5546 1950 1679 1540 250 32 5 chr17 6663033 6663409 -78775071 - L1M3c LINE L1 -5755 1741 1356 269 297 50 30 chr17 6663883 6663984 -78774496 - L2 LINE L2 -4 3309 3207 507 212 63 112 chr17 6664007 6664248 -78774232 - L1MC5 LINE L1 -126 7916 7665 1942 115 7 7 chr17 6664248 6664527 -78773953 + AluSx SINE Alu 1 279 -33 279 54 0 0 chr17 6664527 6664564 -78773916 + (CAAT)n Simple_repeat Simple_repeat 3 39 0 507 212 63 112 chr17 6664564 6664660 -78773820 - L1MC5 LINE L1 -375 7667 7505 669 249 39 11 chr17 6664783 6664964 -78773516 - L1ME2 LINE L1 -158 6006 5821 1452 104 0 0 chr17 6664981 6665163 -78773317 + AluSg SINE Alu 1 182 -128 2200 97 3 23 chr17 6665171 6665480 -78773000 + AluSx SINE Alu 1 303 -9 284 83 21 0 chr17 6665480 6665528 -78772952 + L1PA16 LINE L1 6118 6166 0 2098 120 0 10 chr17 6665543 6665869 -78772611 + AluSx SINE Alu 5 312 0 300 345 117 19 chr17 6666449 6666655 -78771825 + L1ME LINE L1 598 823 -5573 387 210 313 25 chr17 6666684 6667059 -78771421 + L1ME LINE L1 776 1205 -5201 4091 243 52 37 chr17 6667080 6669407 -78769073 + L1PBa LINE L1 3 1644 -5219 1576 160 3 30 chr17 6669404 6669691 -78768789 + L1PB3 LINE L1 5889 6161 -5 * 1383 262 52 15 chr17 6669696 6670158 -78768322 + L1ME LINE L1 1217 1695 -4711 6110 78 29 19 chr17 6670158 6671062 -78767418 + L1PB1 LINE L1 5237 6148 -3 1403 194 9 34 chr17 6671072 6671422 -78767058 + L1ME LINE L1 1691 2031 -4375 180 0 0 0 chr17 6671659 6671679 -78766801 + (CA)n Simple_repeat Simple_repeat 2 21 0 439 231 46 0 chr17 6672154 6672262 -78766218 - L2 LINE L2 -2 3311 3199 261 258 114 135 chr17 6672850 6673183 -78765297 + L2 LINE L2 2943 3268 -4 1649 175 0 31 chr17 6673650 6673941 -78764539 + AluJo SINE Alu 1 282 -30 226 268 18 116 chr17 6673962 6674074 -78764406 - L2 LINE L2 -14 3258 3158 270 0 0 0 chr17 6674192 6674222 -78764258 + (TG)n Simple_repeat Simple_repeat 1 30 0 742 149 9 0 chr17 6674223 6674337 -78764143 - FLAM_C SINE Alu -28 115 1 2272 104 7 10 chr17 6675180 6675315 -78763165 + AluSx SINE Alu 1 135 -177 2377 95 0 7 chr17 6675315 6675621 -78762859 + AluSg SINE Alu 1 304 -6 2272 104 7 10 chr17 6675621 6675794 -78762686 + AluSx SINE Alu 135 308 -4 2344 76 0 3 chr17 6676450 6676741 -78761739 - AluY SINE Alu -21 290 1 338 67 0 0 chr17 6676822 6676867 -78761613 - MADE1 DNA Mariner -35 45 1 2767 215 77 58 chr17 6677610 6678291 -78760189 - HAL1 LINE L1 -604 1903 1196 2615 55 0 7 chr17 6678291 6678600 -78759880 - AluY SINE Alu -4 307 1 2767 215 77 58 chr17 6678600 6678914 -78759566 - HAL1 LINE L1 -1311 1196 889 2610 146 34 0 chr17 6679033 6679451 -78759029 + MSTB1 LTR MaLR 1 432 0 349 287 0 10 chr17 6679452 6679553 -78758927 + MIR SINE MIR 101 200 -62 1123 259 90 25 chr17 6679690 6680077 -78758403 + MLT1K LTR MaLR 108 588 0 871 295 16 28 chr17 6680173 6680536 -78757944 - L1ME LINE L1 -343 5778 5420 191 277 48 48 chr17 6680696 6680779 -78757701 + MIR SINE MIR 25 107 -101 387 248 48 0 chr17 6680960 6681085 -78757395 + L1ME1 LINE L1 6035 6165 -1 1460 76 0 0 chr17 6681091 6681263 -78757217 + AluY SINE Alu 1 172 -139 1757 196 124 28 chr17 6681366 6681628 -78756852 - L1MDa LINE L1 -4791 1749 1514 195 42 0 0 chr17 6681628 6681652 -78756828 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 1757 196 124 28 chr17 6681652 6681890 -78756590 - L1MDa LINE L1 -5026 1514 1201 2174 136 0 7 chr17 6681891 6682200 -78756280 - AluSx SINE Alu -5 307 1 1910 240 27 27 chr17 6682219 6682665 -78755815 - L1MDa LINE L1 -6061 479 34 2448 169 62 102 chr17 6682666 6683489 -78754991 - L1ME1 LINE L1 -341 5825 5065 2073 88 0 4 chr17 6683489 6683750 -78754730 + AluSg SINE Alu 37 296 -14 2448 169 62 102 chr17 6683750 6684107 -78754373 - L1ME1 LINE L1 -1101 5065 4695 606 217 35 0 chr17 6684208 6684323 -78754157 - MER44D DNA MER2_type -220 389 1 412 225 75 116 chr17 6684331 6684470 -78754010 - HAL1 LINE L1 -2223 284 162 2418 89 3 3 chr17 6684470 6684783 -78753697 - AluSp SINE Alu 0 313 1 412 225 75 116 chr17 6684783 6684936 -78753544 - HAL1 LINE L1 -2345 162 4 348 276 95 65 chr17 6684910 6685178 -78753302 - L1MEd LINE L1 -4901 1235 945 * 2503 64 3 0 chr17 6685178 6685474 -78753006 - AluY SINE Alu -14 297 1 348 276 95 65 chr17 6685474 6685680 -78752800 - L1MEd LINE L1 -5191 945 747 26 30 0 0 chr17 6685826 6685859 -78752621 + AT_rich Low_complexity Low_complexity 1 33 0 461 104 0 0 chr17 6685860 6685927 -78752553 - L1PA10 LINE L1 -13 6155 6089 4460 91 15 7 chr17 6685927 6686540 -78751940 + L1PA10 LINE L1 5459 6076 -92 2387 73 7 3 chr17 6686541 6686844 -78751636 - AluY SINE Alu -7 304 1 962 197 126 74 chr17 6687077 6687426 -78751054 - MER66A LTR ERV1 -40 438 66 2251 113 7 0 chr17 6687426 6687736 -78750744 - AluSx SINE Alu 0 312 1 962 197 126 74 chr17 6687736 6687776 -78750704 - MER66A LTR ERV1 -412 66 29 25 0 0 0 chr17 6687854 6687879 -78750601 + AT_rich Low_complexity Low_complexity 1 25 0 2044 148 3 3 chr17 6687972 6688282 -78750198 - AluJo SINE Alu -2 310 1 251 179 0 36 chr17 6688542 6688598 -78749882 - MIR SINE MIR -21 241 188 1144 223 47 69 chr17 6688820 6689215 -78749265 + MLT1K LTR MaLR 165 586 -29 2146 120 3 13 chr17 6689245 6689554 -78748926 - AluSq SINE Alu -2 311 6 258 246 29 0 chr17 6689561 6689630 -78748850 + MLT1K LTR MaLR 514 584 -4 2429 77 3 22 chr17 6689814 6690125 -78748355 - AluSp SINE Alu -8 305 1 284 0 28 0 chr17 6690379 6690415 -78748065 + (TTA)n Simple_repeat Simple_repeat 3 39 0 2346 152 44 12 chr17 6690467 6690875 -78747605 - MSTB LTR MaLR -4 422 2 2386 89 0 0 chr17 6691035 6691326 -78747154 - AluSx SINE Alu -21 291 1 434 110 0 0 chr17 6691648 6691721 -78746759 - L1MC3 LINE L1 -1 7784 7712 2001 82 74 0 chr17 6692407 6692677 -78745803 - AluSx SINE Alu -22 290 1 787 276 133 44 chr17 6692679 6693121 -78745359 - HAL1 LINE L1 -1656 851 357 2251 110 0 3 chr17 6693121 6693429 -78745051 - AluSq SINE Alu -6 307 1 787 276 133 44 chr17 6693429 6693489 -78744991 - HAL1 LINE L1 -2150 357 304 328 165 44 77 chr17 6693501 6693592 -78744888 - Tigger7 DNA MER2_type 0 2587 2500 471 171 0 0 chr17 6693729 6693799 -78744681 - AluJ/FLAM SINE Alu -240 72 3 216 0 0 0 chr17 6693812 6693836 -78744644 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 1840 98 0 0 chr17 6693836 6694072 -78744408 - AluSx SINE Alu -32 280 45 5356 103 31 16 chr17 6694076 6694472 -78744008 - Tigger1 DNA MER2_type -948 1470 1081 2274 114 0 0 chr17 6694472 6694771 -78743709 - AluSg SINE Alu -10 300 2 5356 103 31 16 chr17 6694771 6695187 -78743293 - Tigger1 DNA MER2_type -1337 1081 646 1349 108 15 0 chr17 6695187 6695382 -78743098 - AluSc SINE Alu -13 296 99 530 161 0 76 chr17 6695493 6695611 -78742869 + AluJo SINE Alu 112 220 -92 195 167 136 0 chr17 6695653 6695719 -78742761 + MIR SINE MIR 127 201 -61 267 31 0 0 chr17 6695743 6695775 -78742705 + (CA)n Simple_repeat Simple_repeat 1 32 0 591 212 8 0 chr17 6696212 6696353 -78742127 + FLAM_A SINE Alu 1 142 0 905 169 17 11 chr17 6696398 6696576 -78741904 - MER96B DNA MER1_type? -237 180 2 2313 110 0 7 chr17 6697053 6697362 -78741118 + AluSx SINE Alu 1 307 -5 265 359 57 31 chr17 6697426 6697744 -78740736 + L2 LINE L2 1217 1542 -1772 623 165 65 88 chr17 6697744 6697793 -78740687 - MER106A DNA MER1_type -3 233 184 2362 95 3 7 chr17 6697793 6698099 -78740381 - AluSp SINE Alu -8 305 1 623 165 65 88 chr17 6698099 6698219 -78740261 - MER106A DNA MER1_type -52 184 68 659 149 0 0 chr17 6698249 6698343 -78740137 + 5S rRNA rRNA 1 94 -27 1141 150 86 0 chr17 6698730 6698960 -78739520 - L1MA9 LINE L1 0 6312 6064 1186 206 26 90 chr17 6698951 6699020 -78739460 + MSTB2 LTR MaLR 7 79 -378 1984 142 7 3 chr17 6699020 6699322 -78739158 + AluJb SINE Alu 9 311 -1 1186 206 26 90 chr17 6699322 6699597 -78738883 + MSTB2 LTR MaLR 79 329 -128 2186 88 3 3 chr17 6699698 6699994 -78738486 - AluSq SINE Alu -17 296 1 1549 150 52 21 chr17 6700281 6700294 -78738186 - AluJb SINE Alu -7 295 284 459 63 0 0 chr17 6700294 6700357 -78738123 + (TATG)n Simple_repeat Simple_repeat 2 64 0 1549 150 52 21 chr17 6700357 6700629 -78737851 - AluJb SINE Alu -18 284 1 267 345 54 20 chr17 6700951 6701176 -78737304 + L2 LINE L2 2745 2969 -303 957 189 4 88 chr17 6701587 6701652 -78736828 + MIR SINE MIR 6 75 -187 4161 186 36 45 chr17 6701652 6702614 -78735866 - LTR13 LTR ERVK 0 954 1 957 189 4 88 chr17 6702614 6702786 -78735694 + MIR SINE MIR 75 223 -39 1852 151 0 19 chr17 6702823 6703135 -78735345 - AluSx SINE Alu -6 306 1 900 125 21 0 chr17 6703431 6703575 -78734905 + AluSp/q SINE Alu 163 309 -4 1061 92 12 0 chr17 6703575 6703738 -78734742 + Tigger1 DNA MER2_type 1584 1748 -670 1777 101 0 0 chr17 6703738 6703975 -78734505 + AluSq SINE Alu 1 237 -76 1945 126 0 26 chr17 6704246 6704555 -78733925 + AluJb SINE Alu 1 301 -11 2171 104 0 7 chr17 6704592 6704890 -78733590 + AluSx SINE Alu 1 296 -16 240 237 13 40 chr17 6704892 6704968 -78733512 + MER67C LTR ERV1 28 101 -609 2050 140 25 6 chr17 6705068 6705082 -78733398 + MER67C LTR ERV1 347 359 -351 2268 104 0 0 chr17 6705082 6705379 -78733101 + AluSx SINE Alu 1 297 -15 2050 140 25 6 chr17 6705379 6705721 -78732759 + MER67C LTR ERV1 359 710 0 200 282 84 0 chr17 6705883 6705954 -78732526 - MIR SINE MIR -1 261 185 207 0 0 0 chr17 6706344 6706367 -78732113 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2360 69 0 10 chr17 6709133 6709437 -78729043 - AluY SINE Alu -10 301 1 203 208 19 38 chr17 6710192 6710245 -78728235 + C-rich Low_complexity Low_complexity 2 53 0 207 310 129 9 chr17 6711664 6711780 -78726700 + MIR3 SINE MIR 36 165 -43 984 216 16 0 chr17 6712277 6712462 -78726018 - MER5A DNA MER1_type 0 189 2 1911 152 0 13 chr17 6712526 6712828 -78725652 - AluSx SINE Alu -14 298 1 838 174 0 0 chr17 6714084 6714216 -78724264 + FLAM_C SINE Alu 2 133 0 1714 182 0 3 chr17 6715010 6715306 -78723174 - AluJo SINE Alu -17 295 1 395 314 95 71 chr17 6715613 6716107 -78722373 - L1M4 LINE L1 -2640 3506 3001 404 342 67 53 chr17 6715656 6716092 -78722388 + HAL1b LINE L1 903 1344 -4 23 0 0 0 chr17 6716119 6716142 -78722338 + AT_rich Low_complexity Low_complexity 1 23 0 360 311 56 25 chr17 6716504 6716665 -78721815 - MIR SINE MIR -69 193 28 2179 73 0 0 chr17 6717051 6717326 -78721154 - AluSg SINE Alu -4 306 32 21 0 0 0 chr17 6717633 6717654 -78720826 + GC_rich Low_complexity Low_complexity 1 21 0 1332 207 74 45 chr17 6719150 6719183 -78719297 - MLT1A1 LTR MaLR -2 363 332 2368 73 3 0 chr17 6719183 6719483 -78718997 + AluSg SINE Alu 1 301 -9 1332 207 74 45 chr17 6719483 6719802 -78718678 - MLT1A1 LTR MaLR -33 332 1 316 339 54 0 chr17 6719920 6720032 -78718448 + MIR SINE MIR 30 147 -61 1913 109 8 0 chr17 6720073 6720338 -78718142 + AluSx SINE Alu 29 295 -17 240 279 149 11 chr17 6720357 6720626 -78717854 - HAL1 LINE L1 -1306 1201 896 1001 124 103 5 chr17 6720635 6720829 -78717651 - AluSg/x SINE Alu -15 295 83 453 89 0 0 chr17 6720948 6721004 -78717476 - AluJ/FLAM SINE Alu -247 65 10 2354 64 0 0 chr17 6721024 6721320 -78717160 - AluY SINE Alu -15 296 1 329 274 234 11 chr17 6721402 6721577 -78716903 - MIR SINE MIR 0 262 49 947 220 117 47 chr17 6722534 6722834 -78715646 - MER58B DNA MER1_type -2 339 19 1712 126 15 4 chr17 6723414 6723683 -78714797 - AluSx SINE Alu 0 312 41 1811 54 0 0 chr17 6724882 6725105 -78713375 + AluSg/x SINE Alu 75 297 -13 618 246 110 18 chr17 6725845 6726073 -78712407 + MIR SINE MIR 14 262 0 26 101 0 0 chr17 6726916 6727005 -78711475 + GC_rich Low_complexity Low_complexity 1 89 0 297 0 0 0 chr17 6736664 6736697 -78701783 + (CAG)n Simple_repeat Simple_repeat 1 33 0 767 212 53 6 chr17 6737250 6737420 -78701060 + MER5B DNA MER1_type 1 178 0 1165 173 0 20 chr17 6737518 6737720 -78700760 + AluJo SINE Alu 1 198 -114 233 289 56 22 chr17 6741865 6741955 -78696525 + MIR3 SINE MIR 106 198 -10 1762 183 112 23 chr17 6741955 6742250 -78696230 - MSTC LTR MaLR 0 428 88 2268 78 7 7 chr17 6742250 6742546 -78695934 - AluY SINE Alu -15 296 1 1762 183 112 23 chr17 6742546 6742643 -78695837 - MSTC LTR MaLR -340 88 1 5287 205 92 106 chr17 6742643 6742933 -78695547 - MSTC-int LTR MaLR 0 1735 1442 2236 82 7 0 chr17 6742933 6743227 -78695253 - AluSg SINE Alu -14 296 1 5287 205 92 106 chr17 6743227 6743828 -78694652 - MSTC-int LTR MaLR -293 1442 834 333 0 0 0 chr17 6743828 6743865 -78694615 + (CA)n Simple_repeat Simple_repeat 2 38 0 5287 205 92 106 chr17 6743865 6744504 -78693976 - MSTC-int LTR MaLR -901 834 230 2310 79 3 0 chr17 6744504 6744808 -78693672 - AluSg SINE Alu -5 305 1 5287 205 92 106 chr17 6744808 6745034 -78693446 - MSTC-int LTR MaLR -1505 230 2 933 135 88 31 chr17 6745044 6745237 -78693243 - MSTC LTR MaLR -4 424 221 281 140 0 53 chr17 6745383 6745440 -78693040 - MSTC LTR MaLR -250 178 125 647 165 108 19 chr17 6745440 6745598 -78692882 - MSTC LTR MaLR -256 172 1 2205 109 0 6 chr17 6745673 6745986 -78692494 + AluSq SINE Alu 1 311 -2 454 281 88 72 chr17 6746065 6746256 -78692224 - MIR SINE MIR -6 256 58 2115 95 0 0 chr17 6746256 6746570 -78691910 + AluSx SINE Alu 1 314 0 454 281 88 72 chr17 6746570 6746626 -78691854 - MIR SINE MIR -204 58 4 2457 43 27 0 chr17 6748821 6749122 -78689358 + AluSg SINE Alu 1 309 -1 2647 53 0 0 chr17 6749205 6749507 -78688973 + AluY SINE Alu 1 302 -9 273 230 206 40 chr17 6749524 6749650 -78688830 - MIR SINE MIR -93 169 23 * 440 319 80 5 chr17 6749638 6749826 -78688654 - MIR SINE MIR -38 224 23 328 294 39 10 chr17 6750690 6750792 -78687688 - MER91C DNA MER1_type -35 105 1 1394 39 0 0 chr17 6751084 6751239 -78687241 + AluY SINE Alu 147 301 -10 2190 80 0 104 chr17 6751921 6752259 -78686221 - AluSg SINE Alu -7 303 1 2453 92 0 0 chr17 6752666 6752972 -78685508 + AluSg SINE Alu 1 306 -4 2096 92 14 11 chr17 6756123 6756449 -78682031 + AluSx SINE Alu 1 327 0 699 243 26 30 chr17 6756589 6756856 -78681624 - LTR13 LTR ERVK -741 266 1 784 157 6 81 chr17 6756856 6757028 -78681452 + MIR SINE MIR 65 223 -39 2156 137 0 10 chr17 6757064 6757377 -78681103 - AluSx SINE Alu -2 310 1 2480 81 3 0 chr17 6757684 6757991 -78680489 + AluSp SINE Alu 1 308 -5 735 294 43 62 chr17 6758024 6758524 -78679956 - L2 LINE L2 0 3272 2778 2482 70 0 0 chr17 6758711 6759051 -78679429 - AluY SINE Alu 0 311 1 2383 86 3 0 chr17 6759617 6759908 -78678572 - AluSp SINE Alu -21 292 1 1412 122 0 0 chr17 6760416 6760605 -78677875 - AluSg/x SINE Alu -1 311 123 2382 84 0 0 chr17 6760846 6761157 -78677323 - AluSx SINE Alu 0 311 1 425 314 0 0 chr17 6761216 6761337 -78677143 - LTR67 LTR ERVL -8 549 429 239 266 0 16 chr17 6761505 6761569 -78676911 - LTR67 LTR ERVL -386 171 109 256 215 94 111 chr17 6761681 6761832 -78676648 - L1M4 LINE L1 -2976 3170 3024 1591 110 0 5 chr17 6761832 6762069 -78676411 + AluSq SINE Alu 78 313 0 256 215 94 111 chr17 6762069 6762214 -78676266 - L1M4 LINE L1 -3122 3024 2878 2318 95 0 3 chr17 6762621 6762915 -78675565 + AluSx SINE Alu 2 294 -18 224 280 53 27 chr17 6762983 6763058 -78675422 - MIR SINE MIR -137 125 49 494 122 52 17 chr17 6764346 6764518 -78673962 + (CA)n Simple_repeat Simple_repeat 2 179 0 1711 192 16 39 chr17 6765122 6765503 -78672977 - MLT1A2 LTR MaLR 0 374 3 2464 153 32 114 chr17 6765840 6766063 -78672417 - LTR9 LTR ERV1 -11 601 361 2316 75 4 0 chr17 6766063 6766372 -78672108 - AluSq SINE Alu 0 314 5 2464 153 32 114 chr17 6766372 6766802 -78671678 - LTR9 LTR ERV1 -251 361 1 864 88 0 0 chr17 6766952 6767065 -78671415 + AluSg/x SINE Alu 192 304 -5 3070 167 22 90 chr17 6767702 6768321 -78670159 + LTR8 LTR ERV1 1 661 -30 1204 170 83 104 chr17 6768321 6768781 -78669699 - LTR7 LTR ERV1 0 450 1 2240 100 0 7 chr17 6768781 6769072 -78669408 + AluSc SINE Alu 1 289 -20 3070 167 22 90 chr17 6769072 6769193 -78669287 + LTR8 LTR ERV1 659 691 0 1020 130 13 7 chr17 6769353 6769507 -78668973 + AluJo SINE Alu 12 166 -146 290 150 12 113 chr17 6769515 6769595 -78668885 - MER66A LTR ERV1 -12 466 395 2356 89 0 3 chr17 6769600 6769892 -78668588 + AluSx SINE Alu 15 305 -7 2565 62 0 7 chr17 6769892 6770201 -78668279 + AluSg SINE Alu 1 307 -3 2243 164 2 84 chr17 6770201 6770676 -78667804 - MER41B LTR ERV1 -68 567 132 868 132 0 23 chr17 6770697 6770855 -78667625 + AluJo SINE Alu 157 311 0 829 90 42 102 chr17 6771330 6771353 -78667127 + MER4A LTR ERV1 1 24 -640 1931 112 12 68 chr17 6771353 6771676 -78666804 + AluSx SINE Alu 1 305 -7 829 90 42 102 chr17 6771676 6771819 -78666661 + MER4A LTR ERV1 24 157 -507 * 1789 80 124 0 chr17 6771817 6772092 -78666388 + MER4A LTR ERV1 342 650 -14 2470 78 3 7 chr17 6772562 6772871 -78665609 - AluSx SINE Alu -4 308 1 2246 95 0 3 chr17 6773155 6773440 -78665040 - AluSg SINE Alu -24 286 3 2544 44 0 13 chr17 6774283 6774581 -78663899 + AluY SINE Alu 1 294 -17 1020 251 128 34 chr17 6774714 6775152 -78663328 + ERVL LTR ERVL 4320 4798 -966 1929 95 88 0 chr17 6775167 6775440 -78663040 - AluSg SINE Alu -13 297 1 827 280 37 8 chr17 6775474 6775717 -78662763 + ERVL LTR ERVL 4879 5128 -636 329 166 18 11 chr17 6775815 6775903 -78662577 - Alu SINE Alu -250 52 1 2440 98 3 9 chr17 6775934 6776249 -78662231 - AluSp SINE Alu 0 313 1 1596 179 34 0 chr17 6776324 6776586 -78661894 - AluJb SINE Alu -41 271 1 422 282 118 0 chr17 6776589 6776759 -78661721 - HAL1b LINE L1 -613 735 546 3588 145 7 16 chr17 6776764 6777015 -78661465 + L1MC2 LINE L1 5189 5441 -903 1402 184 63 19 chr17 6777015 6777323 -78661157 + AluJb SINE Alu 1 320 0 3588 145 7 16 chr17 6777323 6777777 -78660703 + L1MC2 LINE L1 5441 5891 -453 1312 118 0 0 chr17 6777778 6777956 -78660524 + AluSp SINE Alu 136 313 0 588 155 23 39 chr17 6777960 6778089 -78660391 + L1MC2 LINE L1 5880 6006 -338 408 305 53 64 chr17 6778110 6778387 -78660093 - HAL1b LINE L1 -840 508 235 700 176 0 37 chr17 6778387 6778523 -78659957 - FLAM_C SINE Alu -2 131 1 408 305 53 64 chr17 6778523 6778622 -78659858 - HAL1b LINE L1 -1113 235 136 2270 98 16 3 chr17 6778789 6779096 -78659384 - AluSp SINE Alu -2 311 1 2956 105 85 0 chr17 6779096 6779554 -78658926 - THE1B-int LTR MaLR -1083 497 1 2610 89 11 3 chr17 6779554 6779915 -78658565 - THE1B LTR MaLR 0 364 1 622 101 0 0 chr17 6779916 6780005 -78658475 + AluSg/x SINE Alu 215 303 -9 2291 112 0 0 chr17 6780617 6780920 -78657560 + AluSg SINE Alu 1 303 -7 2405 87 7 0 chr17 6780986 6781285 -78657195 + AluY SINE Alu 1 301 -10 395 106 15 0 chr17 6781648 6781714 -78656766 + (GA)n Simple_repeat Simple_repeat 2 68 0 2581 63 0 0 chr17 6782254 6782554 -78655926 + AluSc SINE Alu 1 300 -9 2828 115 0 58 chr17 6782782 6783172 -78655308 - L1PB3 LINE L1 -3 6151 5795 2329 117 3 0 chr17 6783172 6783479 -78655001 - AluSx SINE Alu 0 312 5 2828 115 0 58 chr17 6783479 6783592 -78654888 - L1PB3 LINE L1 -359 5795 5677 2505 83 3 3 chr17 6783592 6783905 -78654575 - AluSp SINE Alu 0 313 1 415 283 81 63 chr17 6784004 6784094 -78654386 - L1M4 LINE L1 -1310 4836 4749 4028 193 34 51 chr17 6784094 6785080 -78653400 + LTR5 LTR ERVK 1 969 0 415 283 81 63 chr17 6785080 6785344 -78653136 - L1M4 LINE L1 -1397 4749 4470 2508 43 26 10 chr17 6785344 6785648 -78652832 - AluY SINE Alu -2 309 1 415 283 81 63 chr17 6785648 6785734 -78652746 - L1M4 LINE L1 -1676 4470 4387 258 284 21 42 chr17 6785908 6786003 -78652477 + LTR16C LTR ERVL 96 188 -303 586 231 22 22 chr17 6786075 6786257 -78652223 + LTR16C LTR ERVL 310 491 0 2406 82 0 7 chr17 6786625 6786929 -78651551 + AluSx SINE Alu 1 302 -10 265 204 28 36 chr17 6787148 6787272 -78651208 - L1M LINE L1 -810 5336 5222 2177 119 24 3 chr17 6787288 6787583 -78650897 - AluJb SINE Alu -11 301 1 317 286 128 25 chr17 6787583 6787786 -78650694 - L1MC5 LINE L1 -470 7491 7268 2550 66 3 0 chr17 6787960 6788263 -78650217 - AluSg SINE Alu -6 304 1 294 314 85 8 chr17 6788321 6788439 -78650041 + MIR SINE MIR 130 256 -6 2180 112 3 3 chr17 6789506 6789800 -78648680 - AluSx SINE Alu -18 294 1 2464 67 0 3 chr17 6790435 6790735 -78647745 + AluY SINE Alu 1 299 -12 24 32 0 0 chr17 6790737 6790768 -78647712 + AT_rich Low_complexity Low_complexity 1 31 0 697 263 19 0 chr17 6790809 6790969 -78647511 + MIR SINE MIR 2 164 -98 1307 158 72 66 chr17 6790992 6791053 -78647427 + MLT1A1 LTR MaLR 1 60 -305 2534 73 0 7 chr17 6791053 6791355 -78647125 + AluSp SINE Alu 1 300 -13 1307 158 72 66 chr17 6791355 6791597 -78646883 + MLT1A1 LTR MaLR 60 306 -59 549 210 73 0 chr17 6791599 6791723 -78646757 - FLAM_C SINE Alu -10 133 1 341 191 15 0 chr17 6791724 6791792 -78646688 + MLT1A1 LTR MaLR 297 365 0 242 217 9 113 chr17 6791810 6791870 -78646610 + MIR SINE MIR 147 193 -69 2766 13 0 3 chr17 6791870 6792168 -78646312 - AluY SINE Alu -14 297 1 242 217 9 113 chr17 6792168 6792213 -78646267 + MIR SINE MIR 193 241 -21 2109 125 0 19 chr17 6792226 6792538 -78645942 - AluSg SINE Alu -4 306 1 709 179 0 15 chr17 6792538 6792672 -78645808 - AluJo SINE Alu -178 134 3 694 165 39 18 chr17 6792672 6792835 -78645645 - MLT1A1 LTR MaLR -207 167 1 * 868 316 88 10 chr17 6792835 6793242 -78645238 - MLT1L LTR MaLR -80 535 97 2285 92 10 3 chr17 6793356 6793659 -78644821 - AluSq SINE Alu -8 305 1 2024 78 4 0 chr17 6794589 6794834 -78643646 + AluY SINE Alu 1 246 -65 849 98 0 0 chr17 6794934 6795046 -78643434 - AluSg SINE Alu -198 112 1 4085 150 25 27 chr17 6795234 6796019 -78642461 + LTR1 LTR ERV1 1 784 -1 2169 85 6 63 chr17 6796073 6796404 -78642076 + AluSx SINE Alu 1 312 0 209 281 11 67 chr17 6796983 6797072 -78641408 + L2 LINE L2 2279 2362 -952 2466 96 3 0 chr17 6797103 6797415 -78641065 - AluSq SINE Alu 0 313 1 2250 80 0 40 chr17 6797603 6797905 -78640575 - AluSq SINE Alu -19 294 5 424 310 82 35 chr17 6797922 6798241 -78640239 + L2 LINE L2 2543 2876 -438 2550 91 0 0 chr17 6798967 6799276 -78639204 - AluSc SINE Alu 0 309 1 225 0 0 0 chr17 6799363 6799388 -78639092 + (A)n Simple_repeat Simple_repeat 1 25 0 598 293 35 20 chr17 6799388 6799586 -78638894 - MIR SINE MIR -38 224 24 422 273 115 34 chr17 6799753 6799962 -78638518 - L2 LINE L2 -5 3308 3083 2292 103 0 3 chr17 6800343 6800643 -78637837 - AluSx SINE Alu -13 299 1 5403 40 0 2 chr17 6801529 6802172 -78636308 - L1PA4 LINE L1 -3 6152 5511 8341 52 4 8 chr17 6802319 6803330 -78635150 - LTR13 LTR ERVK 0 1007 1 2319 93 7 0 chr17 6803565 6803856 -78634624 - AluSx SINE Alu -8 304 12 2090 48 0 24 chr17 6804008 6804258 -78634222 - AluY SINE Alu -17 294 51 553 41 0 41 chr17 6804258 6804331 -78634149 - AluY SINE Alu -164 147 78 655 165 10 0 chr17 6804543 6804646 -78633834 - AluJb SINE Alu -13 299 196 2099 108 11 7 chr17 6804650 6804937 -78633543 - AluSx SINE Alu -24 288 1 1720 176 78 22 chr17 6805457 6805983 -78632497 - MLT2A2 LTR ERVL 0 554 1 2208 111 3 0 chr17 6806477 6806775 -78631705 + AluSx SINE Alu 1 299 -13 282 263 5 88 chr17 6806930 6807135 -78631345 - HAL1 LINE L1 -310 2197 2010 256 216 189 0 chr17 6807340 6807414 -78631066 + LOR1a LTR ERV1 3 90 -407 2275 104 0 0 chr17 6807432 6807731 -78630749 - AluY SINE Alu -12 299 1 2376 94 3 0 chr17 6807863 6808161 -78630319 - AluSp SINE Alu -12 301 3 972 288 54 25 chr17 6808389 6808833 -78629647 - HAL1 LINE L1 -833 1674 1218 2494 83 0 3 chr17 6809254 6809566 -78628914 + AluSq SINE Alu 1 311 -2 527 295 90 18 chr17 6809810 6810173 -78628307 + L1M2 LINE L1 5262 5648 -643 588 111 0 0 chr17 6810175 6810265 -78628215 + (TTCC)n Simple_repeat Simple_repeat 3 92 0 1054 149 12 6 chr17 6810273 6810441 -78628039 - FRAM SINE Alu -7 169 1 258 216 122 0 chr17 6810529 6810603 -78627877 + L1ME2 LINE L1 5729 5811 -1997 319 341 38 8 chr17 6810627 6810759 -78627721 + L1ME2 LINE L1 5811 5946 -218 1123 244 53 67 chr17 6810815 6811290 -78627190 - MLT1H LTR MaLR 0 549 82 2275 77 59 3 chr17 6811557 6811844 -78626636 + AluSq SINE Alu 1 303 -10 226 231 0 19 chr17 6812210 6812262 -78626218 - MER112 DNA MER1_type -6 254 204 307 247 148 0 chr17 6812342 6812423 -78626057 - L2 LINE L2 0 3313 3221 2478 78 7 0 chr17 6812828 6813137 -78625343 - AluSq SINE Alu -2 311 1 403 281 22 22 chr17 6813214 6813353 -78625127 + MIR SINE MIR 88 226 -36 207 171 0 0 chr17 6813668 6813703 -78624777 + GA-rich Low_complexity Low_complexity 2 36 0 241 120 53 13 chr17 6814396 6814471 -78624009 + (CCCCAG)n Simple_repeat Simple_repeat 6 83 0 438 159 40 23 chr17 6814899 6815075 -78623405 + (TG)n Simple_repeat Simple_repeat 2 180 0 663 116 56 0 chr17 6815094 6815432 -78623048 + (TG)n Simple_repeat Simple_repeat 1 357 0 1059 169 0 17 chr17 6815584 6815761 -78622719 - AluJo SINE Alu -55 257 84 238 343 40 0 chr17 6816084 6816183 -78622297 + L2 LINE L2 3146 3248 -24 425 246 217 11 chr17 6816448 6816623 -78621857 - L1MEc LINE L1 -5083 1313 1103 364 335 29 4 chr17 6816919 6817164 -78621316 - HAL1 LINE L1 -902 1605 1355 581 167 0 0 chr17 6817188 6817284 -78621196 + MSTB LTR MaLR 327 422 -4 4062 189 66 44 chr17 6817287 6818200 -78620280 - L1 LINE L1 -3752 3813 2921 1831 185 7 7 chr17 6818200 6818503 -78619977 + AluJb SINE Alu 2 304 -8 4062 189 66 44 chr17 6818503 6818659 -78619821 - L1 LINE L1 -4644 2921 2770 1622 138 120 22 chr17 6818659 6818934 -78619546 - AluSg SINE Alu -8 302 1 4062 189 66 44 chr17 6818934 6819242 -78619238 - L1 LINE L1 -4795 2770 2405 6538 222 16 7 chr17 6819268 6820596 -78617884 + L1PA13 LINE L1 1 1340 -5447 1595 219 20 122 chr17 6820597 6821195 -78617285 + L1ME1 LINE L1 5510 6046 -120 408 158 40 0 chr17 6821207 6821283 -78617197 + MLT1D LTR MaLR 28 106 -399 2218 102 7 3 chr17 6821292 6821595 -78616885 + AluSx SINE Alu 1 304 -8 1436 211 31 0 chr17 6821687 6821976 -78616504 + MLT2B3 LTR ERVL 210 507 -47 243 203 0 0 chr17 6821977 6822041 -78616439 + (TATATG)n Simple_repeat Simple_repeat 3 66 0 255 118 0 0 chr17 6822046 6822093 -78616387 + MLT2B3 LTR ERVL 459 544 -10 481 284 109 40 chr17 6822274 6822590 -78615890 + L1MDa LINE L1 2365 2700 -3840 1947 88 0 16 chr17 6822627 6822877 -78615603 + AluSc SINE Alu 1 246 -63 481 123 32 52 chr17 6822978 6823133 -78615347 + C-rich Low_complexity Low_complexity 1 152 0 1528 151 14 76 chr17 6823146 6823437 -78615043 - AluJb SINE Alu -39 273 1 1466 205 57 40 chr17 6823437 6823494 -78614986 - L1MEc LINE L1 -5279 1117 1062 2548 71 0 0 chr17 6823494 6823804 -78614676 - AluY SINE Alu -1 310 1 1466 205 57 40 chr17 6823804 6824170 -78614310 - L1MEc LINE L1 -5334 1062 687 879 303 8 11 chr17 6824170 6824434 -78614046 - L1MEc LINE L1 -6054 342 80 625 287 28 17 chr17 6824491 6824672 -78613808 - MIR SINE MIR -50 212 30 194 104 0 62 chr17 6825308 6825356 -78613124 + (TG)n Simple_repeat Simple_repeat 1 45 0 183 189 0 0 chr17 6825466 6825519 -78612961 + (TG)n Simple_repeat Simple_repeat 2 54 0 345 179 26 26 chr17 6827360 6827477 -78611003 + (TG)n Simple_repeat Simple_repeat 1 117 0 416 131 51 23 chr17 6827536 6827711 -78610769 + (TG)n Simple_repeat Simple_repeat 1 180 0 187 91 61 45 chr17 6827701 6827767 -78610713 + (GTGTG)n Simple_repeat Simple_repeat 4 70 0 * 2310 88 0 3 chr17 6828275 6828572 -78609908 - AluY SINE Alu -15 296 1 325 215 0 0 chr17 6828716 6828781 -78609699 + MER116 DNA Mariner 16 80 0 391 320 59 40 chr17 6828790 6829012 -78609468 - L1M4 LINE L1 -3675 2471 2246 384 277 0 21 chr17 6829015 6829109 -78609371 - MER5B DNA MER1_type -1 177 86 407 42 0 0 chr17 6829110 6829158 -78609322 + AluY SINE Alu 2 49 -263 1464 171 0 13 chr17 6829258 6829497 -78608983 - AluSx SINE Alu -67 245 10 2358 95 0 3 chr17 6829910 6830205 -78608275 - AluSg SINE Alu -16 294 1 2248 118 3 0 chr17 6830226 6830530 -78607950 - AluSx SINE Alu -7 305 1 2377 99 3 0 chr17 6830530 6830831 -78607649 - AluSp SINE Alu -8 305 3 1317 19 0 0 chr17 6830964 6831118 -78607362 + L1PA4 LINE L1 6001 6154 -1 218 350 95 7 chr17 6832400 6832537 -78605943 + MIR SINE MIR 109 257 -5 2904 113 210 70 chr17 6833807 6834967 -78603513 + pTR5 LTR ERV1 743 2468 0 2258 106 0 0 chr17 6835249 6835541 -78602939 - AluSx SINE Alu -20 292 1 333 259 49 105 chr17 6835938 6836100 -78602380 + L1MC/D LINE L1 3808 3960 -2186 803 269 86 20 chr17 6836101 6836402 -78602078 - MLT1J LTR MaLR -148 363 43 2141 121 0 58 chr17 6836442 6836772 -78601708 - AluSx SINE Alu -1 311 1 1790 134 6 75 chr17 6836774 6837109 -78601371 - AluJb SINE Alu 0 312 1 832 215 49 0 chr17 6837109 6837272 -78601208 + MER58B DNA MER1_type 171 341 0 247 263 20 30 chr17 6837331 6837430 -78601050 + L1MC/D LINE L1 4101 4198 -1948 434 319 67 51 chr17 6837561 6837617 -78600863 + L1MC/D LINE L1 4557 4611 -1535 2151 124 3 0 chr17 6837617 6837908 -78600572 - AluSx SINE Alu -20 292 1 434 319 67 51 chr17 6837908 6838366 -78600114 + L1MC/D LINE L1 4611 5082 -1064 2273 112 3 0 chr17 6838366 6838671 -78599809 - AluSc SINE Alu -3 306 1 434 319 67 51 chr17 6838671 6838768 -78599712 + L1MC/D LINE L1 5082 5176 -970 608 211 181 20 chr17 6838768 6839189 -78599291 - LTR33 LTR ERVL 0 521 1 330 316 115 64 chr17 6839219 6839493 -78598987 + L1MC/D LINE L1 5306 5565 -2243 2384 88 0 0 chr17 6839493 6839787 -78598693 + AluSg SINE Alu 1 294 -16 330 316 115 64 chr17 6839787 6839798 -78598682 + L1MC/D LINE L1 5565 5574 -2234 2184 117 0 39 chr17 6839798 6840107 -78598373 + AluSq SINE Alu 1 297 -16 330 316 115 64 chr17 6840107 6840256 -78598224 + L1MC/D LINE L1 5574 5763 -2045 1306 133 20 5 chr17 6840298 6840494 -78597986 + AluSp SINE Alu 20 218 -95 227 287 0 52 chr17 6840833 6840969 -78597511 - L1MC/D LINE L1 -1923 5885 5757 1461 218 3 40 chr17 6841151 6841454 -78597026 + AluJo SINE Alu 1 292 -20 302 298 35 28 chr17 6841591 6841732 -78596748 - HAL1 LINE L1 -85 2422 2281 536 327 53 43 chr17 6841760 6842063 -78596417 - HAL1 LINE L1 -312 2195 1890 578 193 91 30 chr17 6842074 6842271 -78596209 - MER69 DNA AcHobo -10 2516 2308 320 214 0 0 chr17 6842281 6842337 -78596143 - L1MC4 LINE L1 -1339 6703 6648 1454 145 0 0 chr17 6842338 6842538 -78595942 - AluJo SINE Alu -13 299 100 447 134 0 0 chr17 6842589 6842656 -78595824 - AluJ/FLAM SINE Alu -224 88 22 327 248 138 18 chr17 6842664 6842773 -78595707 + MER50 LTR ERV1 10 131 -603 2114 93 0 4 chr17 6842774 6843044 -78595436 - AluSg1 SINE Alu -40 269 1 3334 170 7 38 chr17 6843045 6843621 -78594859 - L1MD2 LINE L1 -465 6288 5732 2196 89 7 0 chr17 6843621 6843924 -78594556 - AluSx SINE Alu 0 307 3 3334 170 7 38 chr17 6843924 6844073 -78594407 - L1MD2 LINE L1 -1021 5732 5580 2382 98 0 0 chr17 6844374 6844680 -78593800 - AluSx SINE Alu -6 306 1 286 301 44 0 chr17 6845459 6845596 -78592884 - LTR16A1 LTR ERVL -10 481 305 363 252 50 8 chr17 6845669 6845788 -78592692 - LTR16C LTR ERVL -164 327 204 2357 74 20 0 chr17 6845886 6846185 -78592295 + AluY SINE Alu 1 305 -6 3359 234 18 32 chr17 6846310 6846837 -78591643 - L1MD2 LINE L1 -2138 4402 3869 1583 133 20 119 chr17 6846837 6847182 -78591298 - AluJb SINE Alu -1 311 1 3359 234 18 32 chr17 6847182 6847211 -78591269 - L1MD2 LINE L1 -2671 3869 3841 2146 90 11 4 chr17 6847211 6847530 -78590950 - AluY SINE Alu 0 321 1 3359 234 18 32 chr17 6847530 6847706 -78590774 - L1MD2 LINE L1 -2699 3841 3664 4230 170 40 51 chr17 6847706 6848670 -78589810 + LTR13 LTR ERVK 1 954 0 3359 234 18 32 chr17 6848670 6848966 -78589514 - L1MD2 LINE L1 -2876 3664 3385 2000 124 60 0 chr17 6848966 6849248 -78589232 + AluSx SINE Alu 1 299 -13 1094 217 49 80 chr17 6849248 6849451 -78589029 - L1MD2 LINE L1 -5027 1516 1308 1835 163 0 40 chr17 6849451 6849776 -78588704 - AluJb SINE Alu 0 312 1 1094 217 49 80 chr17 6849776 6850014 -78588466 - L1MD2 LINE L1 -5235 1308 1064 205 40 0 0 chr17 6850014 6850039 -78588441 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 1720 112 123 8 chr17 6850039 6850290 -78588190 - AluSg1 SINE Alu -29 280 1 1094 217 49 80 chr17 6850290 6850347 -78588133 - L1MD2 LINE L1 -5477 1066 1001 1296 161 39 84 chr17 6850360 6850535 -78587945 - LTR5 LTR ERVK 0 969 788 304 28 0 0 chr17 6850535 6850571 -78587909 + (TTTTA)n Simple_repeat Simple_repeat 2 65 0 2263 54 18 4 chr17 6850571 6850849 -78587631 - AluY SINE Alu -1 317 1 4486 159 32 37 chr17 6850849 6851661 -78586819 - LTR5 LTR ERVK -161 808 1 1296 161 39 84 chr17 6850849 6850982 -78587498 - LTR5 LTR ERVK -179 790 674 325 288 8 8 chr17 6851665 6851783 -78586697 - L1MD2 LINE L1 -5511 1032 915 208 233 0 0 chr17 6852250 6852267 -78586213 + A-rich Low_complexity Low_complexity 4 20 -26 2378 94 7 0 chr17 6852267 6852574 -78585906 + AluSc SINE Alu 1 309 0 208 233 0 0 chr17 6852574 6852599 -78585881 + A-rich Low_complexity Low_complexity 19 46 0 307 394 49 39 chr17 6852664 6852948 -78585532 - L1MD2 LINE L1 -6234 306 20 1250 258 92 32 chr17 6852949 6853150 -78585330 + L1M4 LINE L1 2748 2935 -3211 2485 65 0 10 chr17 6853150 6853459 -78585021 + AluY SINE Alu 1 306 -5 1250 258 92 32 chr17 6853459 6853745 -78584735 + L1M4 LINE L1 2935 3202 -2944 1969 157 7 10 chr17 6853745 6853879 -78584601 + AluSx SINE Alu 1 134 -178 2387 57 47 0 chr17 6853879 6854175 -78584305 + AluY SINE Alu 1 310 -1 1969 157 7 10 chr17 6854175 6854340 -78584140 + AluSx SINE Alu 134 299 -13 1250 258 92 32 chr17 6854340 6854379 -78584101 + L1M4 LINE L1 3202 3237 -2909 2532 60 3 19 chr17 6854379 6854694 -78583786 + AluY SINE Alu 1 310 -1 1250 258 92 32 chr17 6854694 6854945 -78583535 + L1M4 LINE L1 3237 3574 -2572 284 155 357 0 chr17 6854939 6855068 -78583412 + L1M4 LINE L1 4878 5052 -1094 * 1210 176 14 5 chr17 6855068 6855278 -78583202 + AluJo SINE Alu 1 212 -100 250 306 72 0 chr17 6855285 6855396 -78583084 - L1M4 LINE L1 -1898 4248 4130 1175 246 81 48 chr17 6855887 6856427 -78582053 + L2 LINE L2 2473 3069 -244 2816 109 23 32 chr17 6856427 6856605 -78581875 + MSTA LTR MaLR 1 179 -249 2493 72 7 0 chr17 6856605 6856909 -78581571 - AluY SINE Alu -5 306 1 2816 109 23 32 chr17 6856909 6857162 -78581318 + MSTA LTR MaLR 179 428 0 1175 246 81 48 chr17 6857162 6857416 -78581064 + L2 LINE L2 3069 3313 0 3859 48 13 0 chr17 6857434 6857908 -78580572 + L1PA8 LINE L1 5691 6170 -2 248 294 22 0 chr17 6857946 6858038 -78580442 + L1MC4a LINE L1 4498 4591 -1555 261 333 152 0 chr17 6858246 6858411 -78580069 + LTR16A LTR ERVL 261 450 0 2186 103 33 0 chr17 6858463 6858765 -78579715 + AluSx SINE Alu 1 312 0 310 298 90 75 chr17 6858765 6858953 -78579527 + L1MC4a LINE L1 5719 5909 -1899 783 176 0 0 chr17 6860163 6860305 -78578175 + AluSp/q SINE Alu 172 313 0 1749 142 14 17 chr17 6860409 6860698 -78577782 - AluSx SINE Alu -21 291 4 258 398 6 0 chr17 6860708 6860869 -78577611 + (CCCCAA)n Simple_repeat Simple_repeat 2 163 0 223 369 23 17 chr17 6860948 6861124 -78577356 + (CCCCAA)n Simple_repeat Simple_repeat 1 177 0 221 209 76 51 chr17 6862700 6862858 -78575622 + (ATGGTG)n Simple_repeat Simple_repeat 3 164 0 580 311 47 0 chr17 6862861 6863073 -78575407 + MIR SINE MIR 12 233 -29 2380 83 6 10 chr17 6863493 6863805 -78574675 + AluSq SINE Alu 1 311 -2 541 231 125 25 chr17 6864416 6864576 -78573904 - MER5B DNA MER1_type -1 177 2 292 263 56 44 chr17 6865240 6865261 -78573219 - L1MA10 LINE L1 -2 6332 6312 597 243 30 82 chr17 6865261 6865528 -78572952 - L1ME2 LINE L1 -13 6151 5899 1423 227 101 55 chr17 6865799 6866324 -78572156 - MLT1H LTR MaLR 0 549 1 2318 95 3 3 chr17 6866346 6866652 -78571828 - AluSp SINE Alu -7 306 1 865 213 14 36 chr17 6866765 6866986 -78571494 - L2 LINE L2 -793 2521 2306 1897 161 11 0 chr17 6867131 6867410 -78571070 - AluJo SINE Alu -30 282 1 462 262 76 0 chr17 6867411 6867556 -78570924 - LTR33 LTR ERVL -40 481 326 272 324 11 45 chr17 6867948 6868124 -78570356 + (CCCCAG)n Simple_repeat Simple_repeat 4 173 0 244 370 6 6 chr17 6868184 6868346 -78570134 + (CCCCAA)n Simple_repeat Simple_repeat 4 165 0 1161 52 8 0 chr17 6868497 6868631 -78569849 + AluSq/x SINE Alu 1 135 -178 2369 101 3 3 chr17 6868632 6868940 -78569540 + AluSc SINE Alu 1 308 -1 698 265 105 13 chr17 6869074 6869387 -78569093 - MER115 DNA AcHobo -313 380 39 906 47 0 58 chr17 6869428 6869599 -78568881 + (TTTC)n Simple_repeat Simple_repeat 2 162 0 2128 95 29 0 chr17 6869601 6869874 -78568606 - AluSp SINE Alu -32 281 1 2400 146 57 5 chr17 6870752 6871157 -78567323 + MSTA LTR MaLR 1 426 -2 9531 164 20 4 chr17 6871160 6872779 -78565701 + MSTA-int LTR MaLR 7 1651 0 2437 125 62 34 chr17 6872779 6872966 -78565514 + MSTA LTR MaLR 1 181 -247 2096 138 0 3 chr17 6872966 6873262 -78565218 - AluSg SINE Alu -15 295 1 2437 125 62 34 chr17 6873262 6873490 -78564990 + MSTA LTR MaLR 181 428 0 543 337 25 10 chr17 6873627 6873826 -78564654 + MIR SINE MIR 32 233 -29 307 73 0 0 chr17 6875102 6875143 -78563337 + L1MA9 LINE L1 5910 5950 -362 2392 97 0 0 chr17 6875143 6875441 -78563039 + AluSg SINE Alu 1 298 -12 1106 78 0 0 chr17 6877222 6877363 -78561117 - AluSp/q SINE Alu -2 311 171 2192 108 0 7 chr17 6877365 6877661 -78560819 - AluSx SINE Alu -18 294 1 1248 192 0 5 chr17 6877745 6877964 -78560516 - AluJo SINE Alu -11 301 84 2465 67 7 0 chr17 6878271 6878570 -78559910 + AluSx SINE Alu 1 301 -11 876 159 62 40 chr17 6878660 6878836 -78559644 + MLT1C LTR MaLR 38 217 -250 1851 105 6 125 chr17 6878837 6879180 -78559300 + AluSx SINE Alu 1 302 0 2180 78 0 7 chr17 6880027 6880297 -78558183 - AluSc SINE Alu -41 268 1 364 253 95 56 chr17 6880467 6880729 -78557751 + MLT1J2 LTR MaLR 163 443 -7 315 317 56 21 chr17 6880908 6881050 -78557430 - L2 LINE L2 -1252 2062 1916 246 250 37 81 chr17 6881468 6881533 -78556947 - L1M LINE L1 -790 5390 5333 2233 107 0 20 chr17 6881533 6881832 -78556648 - AluSc SINE Alu -16 293 1 246 250 37 81 chr17 6881832 6881902 -78556578 - L1M LINE L1 -847 5333 5261 302 223 122 47 chr17 6881902 6882050 -78556430 - L1MEc LINE L1 -4807 1589 1431 236 347 42 21 chr17 6882747 6882842 -78555638 - MER91C DNA MER1_type -30 110 14 2319 121 0 13 chr17 6883230 6883544 -78554936 + AluSq SINE Alu 2 311 -2 2349 100 3 0 chr17 6883663 6883963 -78554517 - AluSx SINE Alu -11 301 1 2148 43 90 14 chr17 6884087 6884365 -78554115 - AluY SINE Alu -12 299 1 290 256 44 80 chr17 6885035 6885114 -78553366 + MIR SINE MIR 103 176 -86 2199 109 3 3 chr17 6885114 6885407 -78553073 - AluSq SINE Alu -18 295 3 290 256 44 80 chr17 6885407 6885464 -78553016 + MIR SINE MIR 176 234 -28 1496 290 100 19 chr17 6888341 6889092 -78549388 + L2 LINE L2 1562 2373 -941 189 195 0 0 chr17 6889365 6889406 -78549074 + (TG)n Simple_repeat Simple_repeat 2 42 0 1000 147 26 103 chr17 6890446 6890678 -78547802 + MER20 DNA MER1_type 6 219 0 2243 91 7 17 chr17 6893384 6893680 -78544800 - AluSx SINE Alu -16 296 4 228 191 0 21 chr17 6894390 6894437 -78544043 + MLT1K LTR MaLR 509 554 -34 528 243 53 32 chr17 6895572 6895761 -78542719 - LTR33 LTR ERVL -2 519 327 10184 144 35 39 chr17 6895857 6896831 -78541649 + L1MA3 LINE L1 2191 3168 -4397 1668 56 0 95 chr17 6896831 6897062 -78541418 - AluSc SINE Alu -100 209 1 10184 144 35 39 chr17 6897062 6899787 -78538693 + L1MA3 LINE L1 3168 5855 -1710 14253 34 5 11 chr17 6899788 6902908 -78535572 + L1PA4 LINE L1 3046 6154 -1 22 35 0 0 chr17 6902952 6902981 -78535499 + AT_rich Low_complexity Low_complexity 1 29 0 5219 123 21 25 chr17 6903107 6903288 -78535192 + L1MA3 LINE L1 5896 6076 -1648 444 19 0 0 chr17 6903288 6903341 -78535139 + (CA)n Simple_repeat Simple_repeat 2 54 0 5219 123 21 25 chr17 6903341 6904751 -78533729 + L1MA3 LINE L1 6076 7478 -246 3681 114 6 4 chr17 6904751 6905261 -78533219 + MER9 LTR ERVK 1 511 0 32807 58 19 18 chr17 6905261 6906018 -78532462 + HERVK9 LTR ERVK 1 755 -5161 187 233 0 83 chr17 6906018 6906078 -78532402 + MER5B DNA MER1_type 55 109 -69 32807 58 19 18 chr17 6906078 6909421 -78529059 + HERVK9 LTR ERVK 755 4166 -1750 6561 70 21 1 chr17 6909417 6910243 -78528237 + HERVK9 LTR ERVK 4793 5634 -282 * 2342 105 17 12 chr17 6910268 6910620 -78527860 + HERVK9 LTR ERVK 4936 5916 0 3817 93 0 10 chr17 6910620 6911136 -78527344 + MER9 LTR ERVK 1 511 0 1538 88 20 36 chr17 6911136 6911386 -78527094 + L1MA2 LINE L1 6057 6302 -2 555 329 44 16 chr17 6911582 6911831 -78526649 + MIR SINE MIR 7 262 0 402 57 0 0 chr17 6912003 6912056 -78526424 + (T)n Simple_repeat Simple_repeat 1 53 0 978 148 216 26 chr17 6912296 6912689 -78525791 + MER51A LTR ERV1 1 633 -1 1223 152 186 26 chr17 6912690 6912954 -78525526 + MER51A-int LTR ERV1 1 306 -7510 262 270 0 0 chr17 6913216 6913290 -78525190 + MER51A-int LTR ERV1 976 1049 -5480 1406 276 59 71 chr17 6913673 6914701 -78523779 + MER51A-int LTR ERV1 4779 5805 -1951 2487 44 0 0 chr17 6914754 6915052 -78523428 - AluY SINE Alu -13 298 1 1946 99 4 4 chr17 6915052 6915324 -78523156 - AluSp SINE Alu -19 294 23 363 303 47 38 chr17 6915530 6915741 -78522739 + MER51A-int LTR ERV1 4654 4866 -1810 225 0 0 0 chr17 6915812 6915837 -78522643 + (T)n Simple_repeat Simple_repeat 1 25 0 1791 186 58 0 chr17 6915909 6916221 -78522259 + MER51A-int LTR ERV1 7487 7816 0 820 128 195 46 chr17 6916223 6916418 -78522062 + MER51A LTR ERV1 1 224 -410 * 1175 128 78 25 chr17 6916415 6916619 -78521861 + MER51A LTR ERV1 420 634 0 353 224 56 37 chr17 6916620 6916727 -78521753 - L1M4 LINE L1 -1276 4870 4762 515 290 52 8 chr17 6916743 6916995 -78521485 - L1ME LINE L1 -3322 2758 2496 594 272 46 57 chr17 6916996 6917367 -78521113 - L1ME LINE L1 -5703 367 1 1357 125 0 42 chr17 6917549 6917606 -78520874 + L1PA15 LINE L1 5444 5502 -663 2298 53 0 7 chr17 6917606 6917922 -78520558 + AluY SINE Alu 1 314 0 1357 125 0 42 chr17 6917922 6918079 -78520401 + L1PA15 LINE L1 5502 5650 -515 2574 109 6 3 chr17 6918089 6918436 -78520044 - THE1B LTR MaLR -16 348 1 3590 116 4 0 chr17 6918436 6918952 -78519528 + L1PA15 LINE L1 5646 6163 -2 4272 144 57 54 chr17 6919168 6919461 -78519019 - L1MB5 LINE L1 0 6174 5883 207 0 0 0 chr17 6919461 6919484 -78518996 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2115 99 0 0 chr17 6919484 6919766 -78518714 - AluSg SINE Alu -28 282 1 4272 144 57 54 chr17 6919766 6920359 -78518121 - L1MB5 LINE L1 -290 5884 5284 266 295 115 105 chr17 6920471 6920656 -78517824 - MLT1K LTR MaLR -129 459 277 1048 65 0 7 chr17 6920656 6920794 -78517686 + L1PA7 LINE L1 6011 6147 -7 1762 166 0 23 chr17 6920798 6920970 -78517510 - AluJo SINE Alu -7 305 142 2088 60 4 4 chr17 6920970 6921235 -78517245 - AluY SINE Alu -5 306 42 1762 166 0 23 chr17 6921235 6921370 -78517110 - AluJo SINE Alu -170 142 5 266 295 115 105 chr17 6921370 6921569 -78516911 - MLT1K LTR MaLR -313 275 66 5539 155 31 21 chr17 6922341 6924132 -78514348 - L1MA4 LINE L1 -11 6289 4464 298 193 0 0 chr17 6924574 6924631 -78513849 - MLT1K LTR MaLR -8 580 524 4671 171 9 38 chr17 6925885 6926645 -78511835 - L1P LINE L1 -782 5364 4658 1981 138 0 3 chr17 6926645 6926950 -78511530 - AluSx SINE Alu -8 304 1 4671 171 9 38 chr17 6926950 6927203 -78511277 - L1P LINE L1 -1488 4658 4399 1628 173 68 0 chr17 6927190 6927526 -78510954 - L1MA4 LINE L1 -1983 4163 3805 * 4939 155 16 39 chr17 6927525 6928012 -78510468 + L1MA7 LINE L1 5341 5797 -494 2241 106 0 0 chr17 6928012 6928323 -78510157 + AluSx SINE Alu 1 311 -1 4939 155 16 39 chr17 6928323 6928807 -78509673 + L1MA7 LINE L1 5797 6290 -1 805 179 0 15 chr17 6928965 6929099 -78509381 + AluSq/x SINE Alu 4 135 -178 1862 124 3 28 chr17 6929099 6929185 -78509295 + AluSg SINE Alu 1 88 -223 6877 62 27 25 chr17 6929185 6930080 -78508400 + MER11D LTR ERVK 1 897 0 1862 124 3 28 chr17 6930080 6930311 -78508169 + AluSg SINE Alu 88 311 0 917 211 0 12 chr17 6930313 6930479 -78508001 + FRAM SINE Alu 1 164 -2 979 261 67 46 chr17 6930515 6930605 -78507875 - L1M4 LINE L1 -3382 2764 2677 656 224 0 8 chr17 6930605 6930730 -78507750 + FLAM_A SINE Alu 2 125 -8 979 261 67 46 chr17 6930730 6931058 -78507422 - L1M4 LINE L1 -3469 2677 2326 2162 99 0 16 chr17 6931058 6931371 -78507109 + AluSg1 SINE Alu 1 308 -1 979 261 67 46 chr17 6931371 6931564 -78506916 - L1M4 LINE L1 -3820 2326 2139 554 113 0 0 chr17 6931954 6932034 -78506446 + AluSg/x SINE Alu 218 297 -13 810 136 0 0 chr17 6933172 6933290 -78505190 - AluJo SINE Alu -108 204 87 1082 119 85 0 chr17 6933291 6933468 -78505012 - MER46B DNA MER2_type -169 67 1 1677 154 73 20 chr17 6933683 6933784 -78504696 - L1MB3 LINE L1 -7 6176 6082 2316 68 0 13 chr17 6933784 6934093 -78504387 - AluSc SINE Alu -4 305 1 1677 154 73 20 chr17 6934093 6934335 -78504145 - L1MB3 LINE L1 -101 6082 5815 630 128 11 0 chr17 6934337 6934431 -78504049 - AluJo/FRAM SINE Alu -25 287 193 2041 81 0 28 chr17 6934433 6934716 -78503764 - AluSq SINE Alu -38 275 1 695 188 0 7 chr17 6934720 6934858 -78503622 - L1PB4 LINE L1 0 6156 6020 357 213 22 4 chr17 6935087 6935322 -78503158 + (CA)n Simple_repeat Simple_repeat 1 239 0 452 261 6 6 chr17 6935333 6935513 -78502967 + (CA)n Simple_repeat Simple_repeat 1 180 0 275 227 8 0 chr17 6935559 6935687 -78502793 + (CA)n Simple_repeat Simple_repeat 1 129 0 334 237 0 48 chr17 6935700 6935833 -78502647 + (CTCA)n Simple_repeat Simple_repeat 4 127 -53 219 103 0 0 chr17 6935833 6935872 -78502608 + (CA)n Simple_repeat Simple_repeat 1 39 0 334 237 0 48 chr17 6935872 6935924 -78502556 + (CTCA)n Simple_repeat Simple_repeat 127 180 0 * 393 273 12 0 chr17 6935915 6936295 -78502185 + (CA)n Simple_repeat Simple_repeat 1 384 0 339 208 0 0 chr17 6936316 6936441 -78502039 + (CA)n Simple_repeat Simple_repeat 1 125 0 284 0 28 0 chr17 6936560 6936596 -78501884 + (CCCCAG)n Simple_repeat Simple_repeat 1 37 0 265 233 17 0 chr17 6938189 6938249 -78500231 + (CTGGGG)n Simple_repeat Simple_repeat 5 65 0 2026 112 7 3 chr17 6938348 6938653 -78499827 - AluSx SINE Alu -2 310 5 433 289 16 0 chr17 6939594 6939715 -78498765 - MIR SINE MIR -118 144 22 2216 89 3 0 chr17 6939894 6940214 -78498266 + AluSx SINE Alu 1 321 0 2351 86 0 0 chr17 6940219 6940520 -78497960 + AluSq SINE Alu 1 301 -12 2168 94 3 0 chr17 6940852 6941149 -78497331 + AluSq SINE Alu 1 298 -15 508 302 16 16 chr17 6941149 6941341 -78497139 + L1ME3A LINE L1 5974 6165 -5 654 198 0 9 chr17 6941443 6941589 -78496891 - FLAM_A SINE Alu 0 145 1 1461 130 153 11 chr17 6941802 6942063 -78496417 + AluJo SINE Alu 1 298 -4 2149 97 0 13 chr17 6942094 6942394 -78496086 + AluSg1 SINE Alu 1 296 -13 2271 71 0 34 chr17 6942484 6942806 -78495674 + AluY SINE Alu 1 311 0 1731 159 0 3 chr17 6942812 6943095 -78495385 + AluSx SINE Alu 1 282 -30 1023 54 0 0 chr17 6943098 6943264 -78495216 + AluSc SINE Alu 152 317 0 2003 107 3 7 chr17 6943936 6944234 -78494246 + AluSx SINE Alu 1 297 -15 405 0 0 0 chr17 6944237 6944282 -78494198 + (TA)n Simple_repeat Simple_repeat 2 46 0 333 308 75 15 chr17 6944503 6944636 -78493844 + MIR SINE MIR 116 256 -6 2085 84 0 24 chr17 6945477 6945773 -78492707 - AluSg SINE Alu -21 289 1 559 256 98 6 chr17 6945881 6946045 -78492435 - MIR SINE MIR 0 262 84 389 290 233 40 chr17 6946220 6946624 -78491856 + L2 LINE L2 2827 3308 -5 2042 72 7 31 chr17 6946893 6947218 -78491262 + AluSq SINE Alu 1 318 0 2138 113 0 3 chr17 6947426 6947726 -78490754 + AluSq SINE Alu 1 299 -14 285 276 31 10 chr17 6947736 6947834 -78490646 - MER5B DNA MER1_type 0 178 79 2092 111 3 0 chr17 6948466 6948764 -78489716 + AluSq SINE Alu 1 299 -14 2197 98 3 0 chr17 6948846 6949153 -78489327 + AluSg SINE Alu 1 308 -2 235 209 0 0 chr17 6950510 6950553 -78487927 + MER91A DNA MER1_type 119 161 -35 1167 81 6 0 chr17 6950599 6950760 -78487720 - AluSq SINE Alu -4 309 148 266 62 0 0 chr17 6950760 6950792 -78487688 - Alu SINE Alu -266 37 6 388 241 11 59 chr17 6952007 6952194 -78486286 + GA-rich Low_complexity Low_complexity 2 179 0 290 256 0 80 chr17 6952384 6952560 -78485920 + GA-rich Low_complexity Low_complexity 5 166 0 2151 83 40 7 chr17 6954385 6954686 -78483794 + AluY SINE Alu 1 311 0 351 308 53 57 chr17 6955022 6955285 -78483195 - L2 LINE L2 -831 2483 2222 428 214 22 160 chr17 6956992 6957126 -78481354 - L1MC5 LINE L1 -428 7533 7467 1975 105 40 17 chr17 6957126 6957422 -78481058 - AluSx SINE Alu -9 303 1 428 214 22 160 chr17 6957422 6957605 -78480875 - L1MC5 LINE L1 -494 7467 7260 235 248 168 30 chr17 6957738 6957839 -78480641 - L1MC5 LINE L1 -741 7220 7106 2144 120 3 0 chr17 6957839 6958139 -78480341 + AluSx SINE Alu 1 301 -11 1228 126 12 89 chr17 6958144 6958206 -78480274 + AluSg/x SINE Alu 83 148 -162 2279 87 0 3 chr17 6958206 6958504 -78479976 + AluSg1 SINE Alu 1 297 -12 1228 126 12 89 chr17 6958504 6958688 -78479792 + AluSg/x SINE Alu 148 310 0 559 197 108 100 chr17 6958700 6958829 -78479651 - L1MC5 LINE L1 -861 7100 6973 2254 107 0 3 chr17 6958829 6959139 -78479341 - AluSq SINE Alu -4 309 1 559 197 108 100 chr17 6959139 6959335 -78479145 - L1MC5 LINE L1 -988 6973 6769 2490 58 0 6 chr17 6959335 6959648 -78478832 + AluY SINE Alu 1 311 0 559 197 108 100 chr17 6959648 6959711 -78478769 - L1MC5 LINE L1 -1192 6769 6708 780 320 62 52 chr17 6959715 6960177 -78478303 - L1M4 LINE L1 -1369 4777 4321 2355 87 3 10 chr17 6960177 6960488 -78477992 - AluSp SINE Alu -4 309 1 2192 99 0 13 chr17 6960490 6960804 -78477676 - AluSx SINE Alu -2 310 1 780 320 62 52 chr17 6960804 6960968 -78477512 - L1M4 LINE L1 -1825 4321 4160 814 254 78 10 chr17 6960968 6961173 -78477307 + MER20 DNA MER1_type 1 219 0 780 320 62 52 chr17 6961173 6961239 -78477241 - L1M4 LINE L1 -1986 4160 4096 2290 103 0 0 chr17 6961239 6961551 -78476929 + AluSq SINE Alu 1 312 -1 780 320 62 52 chr17 6961551 6961743 -78476737 - L1M4 LINE L1 -2050 4096 3879 1400 149 65 19 chr17 6961743 6962004 -78476476 - AluJo SINE Alu -39 273 1 393 356 115 0 chr17 6962016 6962328 -78476152 - L1M4 LINE L1 -2277 3869 3522 210 258 0 0 chr17 6964050 6964112 -78474368 + (CA)n Simple_repeat Simple_repeat 1 62 0 289 256 0 58 chr17 6965337 6965493 -78472987 + C-rich Low_complexity Low_complexity 4 150 0 1020 141 39 0 chr17 6965677 6965833 -78472647 - FRAM SINE Alu -16 160 1 253 352 6 22 chr17 6966654 6966833 -78471647 + GA-rich Low_complexity Low_complexity 2 177 0 207 0 0 0 chr17 6966932 6966955 -78471525 + (CAGC)n Simple_repeat Simple_repeat 2 24 0 482 186 0 28 chr17 6967267 6967412 -78471068 + (CA)n Simple_repeat Simple_repeat 2 142 0 1753 134 7 22 chr17 6969091 6969366 -78469114 + AluJb SINE Alu 25 295 -17 1729 113 32 0 chr17 6969395 6969642 -78468838 + AluSx SINE Alu 46 300 -12 262 214 0 57 chr17 6971283 6971419 -78467061 + G-rich Low_complexity Low_complexity 1 128 0 492 165 0 0 chr17 6972245 6972324 -78466156 + FLAM SINE Alu 50 128 -15 2092 105 0 0 chr17 6972328 6972613 -78465867 + AluSg SINE Alu 1 285 -25 21 0 0 0 chr17 6972613 6972634 -78465846 + AT_rich Low_complexity Low_complexity 1 21 0 2228 99 0 6 chr17 6972656 6972969 -78465511 - AluSx SINE Alu 0 312 2 249 288 0 0 chr17 6974427 6974486 -78463994 + L2 LINE L2 3252 3310 -3 189 187 40 13 chr17 6976842 6976917 -78461563 + G-rich Low_complexity Low_complexity 2 78 0 209 192 0 19 chr17 6977177 6977229 -78461251 + GA-rich Low_complexity Low_complexity 3 53 0 224 398 16 8 chr17 6977946 6978069 -78460411 + L3 LINE CR1 1448 1571 -6 21 36 0 0 chr17 6979734 6979762 -78458718 + GC_rich Low_complexity Low_complexity 1 28 0 198 0 0 0 chr17 6984175 6984197 -78454283 + (CCCCCA)n Simple_repeat Simple_repeat 3 24 0 569 222 74 37 chr17 6986381 6986570 -78451910 - MER91A DNA MER1_type 0 196 1 371 261 96 0 chr17 6987776 6987891 -78450589 + L1ME3 LINE L1 5837 5962 -208 303 235 0 121 chr17 6987925 6988091 -78450389 + L1ME3 LINE L1 5940 6085 -77 2054 118 0 3 chr17 6988153 6988450 -78450030 - AluSx SINE Alu -16 296 1 2071 92 64 0 chr17 6990750 6991032 -78447448 + AluSq SINE Alu 1 300 -13 2196 116 10 0 chr17 6991146 6991448 -78447032 + AluSx SINE Alu 1 305 -7 252 346 48 0 chr17 6992139 6992243 -78446237 - MIR SINE MIR -107 155 47 2446 55 7 3 chr17 6992373 6992683 -78445797 + AluY SINE Alu 1 311 0 2158 60 0 18 chr17 6993028 6993313 -78445167 - AluY SINE Alu -13 298 19 24 0 0 0 chr17 6994002 6994026 -78444454 + GC_rich Low_complexity Low_complexity 1 24 0 243 146 0 0 chr17 6995728 6995769 -78442711 + (TTC)n Simple_repeat Simple_repeat 1 41 0 21 0 0 0 chr17 6997479 6997500 -78440980 + GC_rich Low_complexity Low_complexity 1 21 0 23 54 0 0 chr17 6997565 6997602 -78440878 + GC_rich Low_complexity Low_complexity 1 37 0 236 326 11 33 chr17 6997859 6998040 -78440440 + C-rich Low_complexity Low_complexity 2 178 0 25 31 0 0 chr17 6999045 6999077 -78439403 + GC_rich Low_complexity Low_complexity 1 32 0 294 98 33 16 chr17 6999082 6999143 -78439337 + CT-rich Low_complexity Low_complexity 1 62 0 2003 125 7 10 chr17 7004455 7004590 -78433890 + AluJo SINE Alu 1 135 -177 2217 108 0 3 chr17 7004590 7004895 -78433585 + AluSg SINE Alu 1 304 -6 2003 125 7 10 chr17 7004895 7005062 -78433418 + AluJo SINE Alu 135 302 -10 2311 87 0 3 chr17 7005067 7005377 -78433103 - AluSg SINE Alu -1 309 1 21 36 0 0 chr17 7005377 7005405 -78433075 + AT_rich Low_complexity Low_complexity 1 28 0 256 297 103 32 chr17 7006980 7007037 -78431443 - MIR SINE MIR 0 262 210 2195 112 0 0 chr17 7007037 7007340 -78431140 - AluSg SINE Alu -1 309 7 256 297 103 32 chr17 7007340 7007437 -78431043 - MIR SINE MIR -52 210 97 328 267 100 0 chr17 7007439 7007559 -78430921 + L2 LINE L2 3174 3305 -8 2395 81 0 0 chr17 7007560 7007867 -78430613 + AluSc SINE Alu 1 307 -2 2274 98 3 3 chr17 7007930 7008236 -78430244 - AluSg SINE Alu -4 306 1 2009 104 35 3 chr17 7009215 7009504 -78428976 + AluSx SINE Alu 1 298 -14 40 67 0 0 chr17 7010884 7010959 -78427521 + GC_rich Low_complexity Low_complexity 1 75 0 296 277 0 50 chr17 7011183 7011284 -78427196 + G-rich Low_complexity Low_complexity 3 98 0 196 321 0 0 chr17 7012647 7012703 -78425777 + L2 LINE L2 3258 3313 0 182 167 0 24 chr17 7012796 7012838 -78425642 - L2 LINE L2 -665 2649 2609 294 331 60 23 chr17 7012849 7012982 -78425498 - L2 LINE L2 -1 3312 3175 2381 64 7 3 chr17 7013293 7013591 -78424889 + AluSp SINE Alu 1 299 -14 352 296 301 10 chr17 7013826 7014022 -78424458 - MIR SINE MIR -2 260 8 224 241 0 0 chr17 7014490 7014544 -78423936 + T-rich Low_complexity Low_complexity 1 54 0 307 330 106 28 chr17 7014605 7014784 -78423696 - L2 LINE L2 0 3313 3121 2355 54 3 10 chr17 7014823 7015119 -78423361 + AluY SINE Alu 1 294 -17 2116 91 24 3 chr17 7015361 7015648 -78422832 + AluSx SINE Alu 3 295 -17 1975 117 24 0 chr17 7015652 7015943 -78422537 + AluSg1 SINE Alu 3 300 -9 867 138 0 0 chr17 7016727 7016850 -78421630 - AluJb SINE Alu -189 123 1 229 336 64 0 chr17 7016884 7016994 -78421486 - MIR SINE MIR -38 224 108 1568 193 10 20 chr17 7017011 7017316 -78421164 - AluJb SINE Alu -10 302 1 2070 123 0 0 chr17 7017369 7017653 -78420827 + AluSg SINE Alu 3 286 -24 437 87 0 0 chr17 7017662 7017731 -78420749 + MER41B LTR ERV1 480 548 -87 2245 114 0 0 chr17 7017746 7018044 -78420436 + AluSx SINE Alu 1 298 -14 24 32 0 0 chr17 7019486 7019517 -78418963 + AT_rich Low_complexity Low_complexity 1 31 0 25 31 0 0 chr17 7021030 7021062 -78417418 + GC_rich Low_complexity Low_complexity 1 32 0 28 79 0 0 chr17 7022094 7022157 -78416323 + GC_rich Low_complexity Low_complexity 1 63 0 1667 164 13 10 chr17 7023182 7023486 -78414994 - AluJb SINE Alu -7 305 1 2234 102 0 10 chr17 7023867 7024170 -78414310 - AluSq SINE Alu -13 300 1 738 204 21 14 chr17 7024239 7024381 -78414099 - FRAM SINE Alu -25 151 9 2199 93 0 3 chr17 7024391 7024680 -78413800 - AluSx SINE Alu -16 296 9 2484 55 0 10 chr17 7024698 7025010 -78413470 - AluY SINE Alu 0 311 3 1836 114 8 4 chr17 7025010 7025264 -78413216 - AluSx SINE Alu -57 255 1 189 0 0 0 chr17 7025270 7025291 -78413189 + (T)n Simple_repeat Simple_repeat 1 21 0 2313 96 0 6 chr17 7025305 7025617 -78412863 - AluSg SINE Alu 0 310 1 715 136 9 0 chr17 7025635 7025745 -78412735 - HY1 scRNA scRNA 0 112 2 265 267 222 11 chr17 7025802 7025982 -78412498 + L2 LINE L2 2531 2748 -566 2082 43 43 43 chr17 7025983 7026298 -78412182 + AluY SINE Alu 1 315 0 532 250 89 72 chr17 7026352 7026712 -78411768 + L2 LINE L2 2869 3234 -79 2198 130 0 9 chr17 7026786 7027101 -78411379 - AluSx SINE Alu 0 312 1 347 273 176 91 chr17 7027102 7027143 -78411337 - L2 LINE L2 -10 3303 3267 1061 164 6 0 chr17 7027143 7027302 -78411178 + FRAM SINE Alu 1 160 -6 2135 109 0 3 chr17 7027308 7027601 -78410879 + AluSg SINE Alu 1 292 -18 2038 88 26 39 chr17 7027609 7027917 -78410563 + AluSg SINE Alu 1 304 -6 2335 94 0 0 chr17 7027917 7028216 -78410264 + AluSq SINE Alu 1 299 -14 347 273 176 91 chr17 7028216 7028443 -78410037 - L2 LINE L2 -56 3257 2982 2165 114 0 13 chr17 7028443 7028750 -78409730 + AluSq SINE Alu 1 303 -10 347 273 176 91 chr17 7028750 7028804 -78409676 - L2 LINE L2 -331 2982 2934 688 180 78 106 chr17 7028857 7029074 -78409406 - MER20 DNA MER1_type 0 219 9 2131 115 10 0 chr17 7029154 7029450 -78409030 + AluSp SINE Alu 1 299 -14 362 286 97 39 chr17 7029459 7029674 -78408806 - L2 LINE L2 -2167 1147 946 1805 148 0 43 chr17 7029674 7029979 -78408501 + AluJb SINE Alu 3 294 -18 2060 75 45 24 chr17 7029979 7030292 -78408188 + AluY SINE Alu 1 311 0 362 286 97 39 chr17 7030292 7030334 -78408146 - L2 LINE L2 -2367 947 874 799 168 29 92 chr17 7030374 7030547 -78407933 + AluSq SINE Alu 1 162 -151 511 66 0 0 chr17 7030549 7030625 -78407855 + Alu SINE Alu 226 301 0 855 164 0 0 chr17 7030636 7030770 -78407710 + AluSg/x SINE Alu 161 294 -18 1979 132 24 0 chr17 7030775 7031064 -78407416 + AluSx SINE Alu 2 297 -15 954 321 106 27 chr17 7031066 7031393 -78407087 - L2 LINE L2 -2474 840 540 2293 91 0 0 chr17 7031393 7031691 -78406789 + AluSg SINE Alu 1 298 -12 2177 76 10 16 chr17 7031691 7031995 -78406485 + AluY SINE Alu 1 302 -9 954 321 106 27 chr17 7031995 7032268 -78406212 - L2 LINE L2 -2773 541 191 284 316 20 7 chr17 7032602 7032754 -78405726 + L1M4 LINE L1 3605 3758 -2388 2107 123 0 16 chr17 7032754 7032891 -78405589 + AluSx SINE Alu 1 139 -173 2176 67 0 0 chr17 7032891 7033161 -78405319 + AluY SINE Alu 37 306 -5 2107 123 0 16 chr17 7033161 7033333 -78405147 + AluSx SINE Alu 139 305 -7 262 316 0 60 chr17 7033333 7033379 -78405101 + L1M4 LINE L1 3844 3891 -2255 2178 116 0 0 chr17 7033379 7033681 -78404799 + AluY SINE Alu 1 302 -9 2438 75 3 0 chr17 7033685 7033991 -78404489 + AluSp SINE Alu 1 307 -6 262 316 0 60 chr17 7033991 7034107 -78404373 + L1M4 LINE L1 3894 4001 -2145 309 264 27 78 chr17 7034137 7034269 -78404211 + L1M4 LINE L1 4075 4212 -1934 2143 118 3 0 chr17 7034269 7034575 -78403905 + AluSg SINE Alu 2 308 -2 309 264 27 78 chr17 7034575 7034628 -78403852 + L1M4 LINE L1 4212 4246 -1900 2114 112 10 0 chr17 7034628 7034933 -78403547 + AluSp SINE Alu 2 309 -4 309 264 27 78 chr17 7034933 7035004 -78403476 + L1M4 LINE L1 4246 4319 -1827 315 122 0 0 chr17 7035067 7035116 -78403364 + (A)n Simple_repeat Simple_repeat 1 49 0 1833 170 23 3 chr17 7035116 7035422 -78403058 + AluJb SINE Alu 1 312 0 1082 331 66 64 chr17 7035429 7035455 -78403025 + L1M4 LINE L1 4345 4369 -1777 1942 127 0 3 chr17 7035455 7035760 -78402720 + AluSg SINE Alu 1 304 0 1082 331 66 64 chr17 7035760 7035989 -78402491 + L1M4 LINE L1 4369 4596 -1550 2082 121 0 3 chr17 7035989 7036287 -78402193 + AluSq SINE Alu 1 297 -16 1082 331 66 64 chr17 7036287 7036438 -78402042 + L1M4 LINE L1 4596 4745 -1401 2221 108 3 6 chr17 7036438 7036752 -78401728 + AluSq SINE Alu 1 313 0 1082 331 66 64 chr17 7036752 7037160 -78401320 + L1M4 LINE L1 4745 5167 -979 2022 138 0 0 chr17 7037160 7037457 -78401023 + AluSx SINE Alu 1 297 -15 1082 331 66 64 chr17 7037457 7037543 -78400937 + L1M4 LINE L1 5167 5251 -895 2287 104 3 0 chr17 7037550 7037858 -78400622 - AluSp SINE Alu -4 309 1 2163 89 0 0 chr17 7037869 7038175 -78400305 - AluY SINE Alu 0 306 1 2148 113 7 0 chr17 7038267 7038569 -78399911 + AluSx SINE Alu 1 304 -8 730 225 33 0 chr17 7038665 7038816 -78399664 + AluJb SINE Alu 140 295 -17 2163 110 3 7 chr17 7038818 7039127 -78399353 + AluSp SINE Alu 2 309 -4 2072 118 10 0 chr17 7039301 7039597 -78398883 - AluSx SINE Alu -13 299 1 205 362 92 28 chr17 7039916 7040134 -78398346 - L2 LINE L2 -708 2606 2375 304 268 27 80 chr17 7042412 7042524 -78395956 - MIR SINE MIR -75 187 82 220 261 0 0 chr17 7046451 7046497 -78391983 + C-rich Low_complexity Low_complexity 2 47 0 2292 68 13 7 chr17 7046695 7047002 -78391478 - AluY SINE Alu -1 310 2 1911 118 28 14 chr17 7048446 7048735 -78389745 - AluSx SINE Alu -13 299 7 959 154 91 11 chr17 7051142 7051317 -78387163 - MER5A DNA MER1_type 0 189 1 376 306 11 17 chr17 7053937 7054117 -78384363 + (CCG)n Simple_repeat Simple_repeat 2 180 0 21 36 0 0 chr17 7054324 7054352 -78384128 + GC_rich Low_complexity Low_complexity 1 28 0 943 86 0 0 chr17 7054831 7054959 -78383521 - AluSg/x SINE Alu 0 312 185 1976 99 7 3 chr17 7055055 7055357 -78383123 - AluSx SINE Alu 0 303 1 243 215 32 75 chr17 7055482 7055575 -78382905 + L2 LINE L2 2910 2998 -315 319 298 144 21 chr17 7055605 7055793 -78382687 + L2 LINE L2 3102 3312 -1 258 56 0 0 chr17 7055865 7055914 -78382566 + Alu SINE Alu 1 34 -267 2316 112 0 3 chr17 7056590 7056904 -78381576 + AluSq SINE Alu 1 313 0 1935 106 6 45 chr17 7056918 7057055 -78381425 + AluSx SINE Alu 1 142 -170 2085 78 13 42 chr17 7057055 7057362 -78381118 + AluY SINE Alu 1 298 -13 1935 106 6 45 chr17 7057362 7057536 -78380944 + AluSx SINE Alu 142 300 -12 1509 74 79 0 chr17 7057538 7057741 -78380739 + AluY SINE Alu 1 219 -92 1891 141 0 0 chr17 7057841 7058117 -78380363 - AluSx SINE Alu -36 276 1 1809 149 17 7 chr17 7058194 7058496 -78379984 - AluJb SINE Alu -7 305 1 668 267 172 9 chr17 7058602 7058934 -78379546 + MLT1G3 LTR MaLR 8 357 -173 2426 57 0 0 chr17 7059072 7059368 -78379112 + AluY SINE Alu 1 296 -15 395 328 111 16 chr17 7059570 7059759 -78378721 - L2 LINE L2 0 3313 3107 1207 131 0 0 chr17 7059804 7059979 -78378501 - AluSg/x SINE Alu -4 308 134 1953 59 4 0 chr17 7059979 7060217 -78378263 - AluSx SINE Alu -15 297 59 1824 146 0 55 chr17 7060394 7060544 -78377936 + AluJo SINE Alu 1 125 -187 2268 90 7 0 chr17 7060544 7060844 -78377636 + AluSg SINE Alu 1 302 -8 1824 146 0 55 chr17 7060844 7061021 -78377459 + AluJo SINE Alu 125 310 -2 2017 108 4 0 chr17 7061180 7061481 -78376999 + AluSx SINE Alu 6 307 0 235 340 65 39 chr17 7061574 7061806 -78376674 - L2 LINE L2 -224 3048 2811 196 322 163 56 chr17 7061798 7062031 -78376449 - L2 LINE L2 -763 2551 2294 * 1843 87 4 12 chr17 7062122 7062375 -78376105 + AluSc SINE Alu 1 251 -58 545 302 42 0 chr17 7062490 7062679 -78375801 + MIR SINE MIR 6 202 -60 380 295 0 0 chr17 7062679 7062791 -78375689 + MLT1F LTR MaLR 1 112 -430 752 219 18 0 chr17 7062796 7062965 -78375515 + MLT1F LTR MaLR 65 236 -306 2143 97 7 0 chr17 7062965 7063254 -78375226 + AluSx SINE Alu 1 291 -21 268 379 0 24 chr17 7063295 7063419 -78375061 - MIR SINE MIR -108 154 34 2071 136 0 0 chr17 7063504 7063799 -78374681 + AluSx SINE Alu 1 295 -17 229 322 89 0 chr17 7063837 7063927 -78374553 - L2 LINE L2 -46 3226 3129 233 307 74 61 chr17 7063943 7064106 -78374374 + L2 LINE L2 3037 3201 -112 1951 141 10 13 chr17 7064975 7065109 -78373371 + AluJb SINE Alu 1 134 -178 2191 105 0 25 chr17 7065109 7065423 -78373057 + AluSx SINE Alu 1 306 -6 1951 141 10 13 chr17 7065423 7065600 -78372880 + AluJb SINE Alu 134 311 -1 2014 157 0 0 chr17 7066209 7066508 -78371972 + AluSx SINE Alu 1 299 -13 2578 174 32 100 chr17 7066508 7066627 -78371853 + L1ME1 LINE L1 5429 5555 -611 1602 211 0 13 chr17 7066627 7066931 -78371549 + AluJo SINE Alu 1 300 -12 2232 78 0 7 chr17 7066933 7067257 -78371223 + AluY SINE Alu 1 322 0 2168 111 0 0 chr17 7067257 7067545 -78370935 + AluSx SINE Alu 2 289 -23 2107 85 32 3 chr17 7067554 7067837 -78370643 + AluSq SINE Alu 1 291 -22 2578 174 32 100 chr17 7067837 7067928 -78370552 + L1ME1 LINE L1 5563 5659 -507 2346 70 0 13 chr17 7067928 7068230 -78370250 + AluY SINE Alu 1 298 -13 2578 174 32 100 chr17 7068230 7068790 -78369690 + L1ME1 LINE L1 5659 6161 -5 1826 100 85 18 chr17 7068908 7069189 -78369291 + AluSq SINE Alu 1 300 -13 1584 218 26 71 chr17 7069351 7069841 -78368639 + MER21B LTR ERV1 1 468 -395 207 100 0 0 chr17 7069846 7069876 -78368604 + (TCCC)n Simple_repeat Simple_repeat 1 30 0 2136 136 7 0 chr17 7069876 7070185 -78368295 - AluSx SINE Alu -1 311 1 1053 99 0 0 chr17 7070191 7070333 -78368147 - AluJb SINE Alu -170 142 1 1222 210 48 12 chr17 7070333 7070666 -78367814 + MER21B LTR ERV1 461 805 -58 219 349 92 0 chr17 7070809 7070918 -78367562 + L2 LINE L2 2705 2823 -491 * 330 248 165 0 chr17 7070897 7071006 -78367474 + L2 LINE L2 3146 3272 0 217 215 0 159 chr17 7071185 7071292 -78367188 + L2 LINE L2 2946 3035 -237 2261 101 0 0 chr17 7071293 7071591 -78366889 - AluSq SINE Alu -15 298 1 290 179 0 0 chr17 7071778 7071834 -78366646 + FLAM_A SINE Alu 11 66 -67 299 302 32 16 chr17 7071910 7072036 -78366444 + L1MEd LINE L1 561 688 -5431 890 209 12 0 chr17 7072050 7072222 -78366258 + FAM SINE Alu 1 46 -3 241 182 121 0 chr17 7072225 7072291 -78366189 + L1MEd LINE L1 682 755 -5364 368 306 64 25 chr17 7072507 7072638 -78365842 + L1M4 LINE L1 2662 2801 -4048 1849 167 23 3 chr17 7072638 7072944 -78365536 + AluJb SINE Alu 1 312 0 368 306 64 25 chr17 7072944 7072969 -78365511 + L1M4 LINE L1 2801 2824 -4025 * 551 332 66 19 chr17 7072951 7072977 -78365503 + L1M4 LINE L1 5047 5070 -1778 1942 127 0 3 chr17 7072977 7073286 -78365194 + AluSg SINE Alu 1 308 0 551 332 66 19 chr17 7073286 7073514 -78364966 + L1M4 LINE L1 5070 5314 -1534 2068 124 0 3 chr17 7073515 7073813 -78364667 + AluSq SINE Alu 1 297 -16 2207 100 3 7 chr17 7073964 7074264 -78364216 + AluSq SINE Alu 1 299 -14 352 296 301 10 chr17 7074505 7074701 -78363779 - MIR SINE MIR -2 260 8 215 245 0 0 chr17 7075169 7075222 -78363258 + T-rich Low_complexity Low_complexity 1 53 0 307 330 106 28 chr17 7075283 7075462 -78363018 - L2 LINE L2 0 3313 3121 2355 54 3 10 chr17 7075501 7075797 -78362683 + AluY SINE Alu 1 294 -17 2081 90 24 7 chr17 7076039 7076327 -78362153 + AluSx SINE Alu 3 295 -17 1975 117 24 0 chr17 7076331 7076622 -78361858 + AluSg1 SINE Alu 3 300 -9 841 146 0 0 chr17 7077406 7077529 -78360951 - AluJb SINE Alu -189 123 1 229 336 64 0 chr17 7077563 7077673 -78360807 - MIR SINE MIR -38 224 108 1559 102 13 0 chr17 7077853 7078079 -78360401 - AluY SINE Alu -82 229 1 299 227 21 31 chr17 7078083 7078180 -78360300 - L1M4 LINE L1 -492 5682 5587 228 35 0 0 chr17 7078228 7078257 -78360223 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 1228 199 12 72 chr17 7078381 7078702 -78359778 - AluJo SINE Alu -10 302 1 212 307 27 0 chr17 7078746 7078821 -78359659 - MIR SINE MIR -102 160 84 2249 96 3 3 chr17 7078858 7079170 -78359310 - AluSx SINE Alu 0 312 1 2213 62 10 16 chr17 7079377 7079683 -78358797 - AluSg SINE Alu -6 304 1 2184 85 23 3 chr17 7079697 7080004 -78358476 - AluSp SINE Alu 0 313 1 276 130 0 0 chr17 7080931 7080977 -78357503 + (CGG)n Simple_repeat Simple_repeat 3 48 0 327 341 93 48 chr17 7083673 7084108 -78354372 - L1M4c LINE L1 -4863 1256 814 180 0 0 0 chr17 7085461 7085481 -78352999 + (T)n Simple_repeat Simple_repeat 1 20 0 207 100 0 0 chr17 7085654 7085684 -78352796 + (GGGGA)n Simple_repeat Simple_repeat 1 30 0 182 256 0 0 chr17 7085868 7085907 -78352573 + L2 LINE L2 253 291 -3023 243 321 12 0 chr17 7087987 7088071 -78350409 + CT-rich Low_complexity Low_complexity 6 90 0 22 88 0 0 chr17 7088616 7088673 -78349807 + GC_rich Low_complexity Low_complexity 1 57 0 23 33 0 0 chr17 7088724 7088754 -78349726 + GC_rich Low_complexity Low_complexity 1 30 0 335 309 149 54 chr17 7089832 7090118 -78348362 + L2 LINE L2 2836 3166 -147 2259 67 27 3 chr17 7090118 7090418 -78348062 + AluSc SINE Alu 1 307 -2 335 309 149 54 chr17 7090418 7090500 -78347980 + L2 LINE L2 3166 3239 -74 1195 133 0 11 chr17 7092162 7092342 -78346138 - AluJo SINE Alu -132 180 3 1860 163 0 0 chr17 7094067 7094367 -78344113 - AluJb SINE Alu -12 300 1 423 349 43 30 chr17 7097775 7098007 -78340473 - MIR SINE MIR -11 251 17 186 278 97 0 chr17 7099444 7099516 -78338964 + MIR SINE MIR 128 206 -56 2109 105 0 3 chr17 7099532 7099828 -78338652 - AluSx SINE Alu -17 295 1 1575 153 41 57 chr17 7101297 7101611 -78336869 - AluJo SINE Alu -3 309 1 4329 183 36 46 chr17 7102214 7103177 -78335303 + LTR13 LTR ERVK 1 954 0 2203 110 0 3 chr17 7103907 7104216 -78334264 - AluSg SINE Alu -1 309 2 2155 119 0 0 chr17 7104227 7104530 -78333950 - AluSx SINE Alu -4 308 6 224 226 30 83 chr17 7106428 7106561 -78331919 + G-rich Low_complexity Low_complexity 6 131 0 1730 186 3 0 chr17 7107051 7107342 -78331138 + AluJo SINE Alu 1 292 -20 833 272 92 13 chr17 7107645 7108140 -78330340 - L2 LINE L2 -69 3244 2709 385 214 0 0 chr17 7108156 7108226 -78330254 - MER91B DNA MER1_type -1 189 120 1995 164 0 0 chr17 7108235 7108547 -78329933 - AluSx SINE Alu 0 312 1 2011 117 7 10 chr17 7108566 7108866 -78329614 - AluSx SINE Alu 0 312 14 340 302 69 25 chr17 7108867 7109026 -78329454 - MER91B DNA MER1_type -13 177 12 239 209 0 75 chr17 7111416 7111483 -78326997 - L2 LINE L2 -18 3254 3193 450 273 120 34 chr17 7112218 7112303 -78326177 + MIR SINE MIR 1 77 -185 2334 64 7 0 chr17 7112303 7112598 -78325882 - AluY SINE Alu -14 297 1 450 273 120 34 chr17 7112598 7112721 -78325759 + MIR SINE MIR 77 227 -35 2412 40 0 13 chr17 7113533 7113833 -78324647 - AluSc SINE Alu -13 296 1 270 247 12 49 chr17 7114014 7114095 -78324385 - L2 LINE L2 0 3313 3236 30 45 0 0 chr17 7114992 7115036 -78323444 + GC_rich Low_complexity Low_complexity 1 44 0 1012 177 21 0 chr17 7119896 7120088 -78318392 + MER20 DNA MER1_type 1 196 -23 730 120 16 0 chr17 7120108 7120233 -78318247 + GA-rich Low_complexity Low_complexity 3 129 0 434 259 28 0 chr17 7120449 7120557 -78317923 - MER5B DNA MER1_type -5 173 63 2343 99 3 0 chr17 7120660 7120972 -78317508 - AluSq SINE Alu 0 313 1 47 14 0 29 chr17 7120983 7121019 -78317461 + AT_rich Low_complexity Low_complexity 1 36 -31 2162 114 3 0 chr17 7121019 7121316 -78317164 - AluSx SINE Alu -14 298 1 47 14 0 29 chr17 7121316 7121348 -78317132 + AT_rich Low_complexity Low_complexity 36 67 0 717 217 0 0 chr17 7121348 7121468 -78317012 - FLAM_C SINE Alu -23 120 1 276 272 0 87 chr17 7121495 7121587 -78316893 - MIR3 SINE MIR -49 159 76 21 0 0 0 chr17 7172508 7172529 -78265951 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr17 7173518 7173546 -78264934 + AT_rich Low_complexity Low_complexity 1 28 0 33 56 0 0 chr17 7174163 7174217 -78264263 + AT_rich Low_complexity Low_complexity 1 54 0 1969 159 72 100 chr17 7174543 7175072 -78263408 - LTR8A LTR ERV1 0 727 214 1109 188 0 0 chr17 7175205 7175423 -78263057 + L1 LINE L1 3592 3809 -2337 22 35 0 0 chr17 7175748 7175777 -78262703 + AT_rich Low_complexity Low_complexity 1 29 0 613 240 134 6 chr17 7175945 7176124 -78262356 + MLT1D LTR MaLR 304 505 0 266 132 19 0 chr17 7176295 7176348 -78262132 + (TA)n Simple_repeat Simple_repeat 1 54 0 1850 171 68 11 chr17 7176355 7176706 -78261774 - MSTB LTR MaLR -55 371 1 678 169 16 0 chr17 7176706 7176830 -78261650 - MSTB-int LTR MaLR 0 1651 1526 380 296 45 0 chr17 7176937 7177069 -78261411 + MIR SINE MIR 121 258 -4 204 40 0 0 chr17 7177266 7177291 -78261189 + (T)n Simple_repeat Simple_repeat 1 25 0 360 293 108 24 chr17 7177697 7177864 -78260616 - MIR3 SINE MIR -3 205 25 31 26 0 0 chr17 7178171 7178209 -78260271 + AT_rich Low_complexity Low_complexity 1 38 0 241 265 44 0 chr17 7178690 7178758 -78259722 + MIR SINE MIR 129 199 -63 694 144 23 0 chr17 7178883 7179015 -78259465 - L1MD1 LINE L1 -1 6241 6107 870 95 0 0 chr17 7179115 7179255 -78259225 + AluSg/x SINE Alu 166 305 0 2151 105 4 0 chr17 7179470 7179747 -78258733 - AluSq SINE Alu -35 278 1 808 103 52 0 chr17 7180371 7180517 -78257963 + AluY SINE Alu 163 314 0 2260 105 10 0 chr17 7180582 7180878 -78257602 - AluSq SINE Alu -14 299 1 473 271 110 7 chr17 7180878 7181024 -78257456 + MIR SINE MIR 95 259 -3 656 273 34 59 chr17 7181043 7181281 -78257199 - MIR SINE MIR -14 248 17 604 94 0 24 chr17 7181347 7181432 -78257048 + AluS SINE Alu 2 84 -229 320 229 10 52 chr17 7181432 7181528 -78256952 - L2 LINE L2 -414 2900 2809 2262 118 0 13 chr17 7181700 7182015 -78256465 - AluSx SINE Alu -1 311 1 736 232 24 66 chr17 7182403 7182474 -78256006 - L2 LINE L2 -538 2776 2704 2277 118 0 6 chr17 7182474 7182788 -78255692 - AluSx SINE Alu 0 312 1 736 232 24 66 chr17 7182788 7182927 -78255553 - L2 LINE L2 -610 2704 2575 1229 172 98 8 chr17 7182927 7183171 -78255309 + MER66B LTR ERV1 1 266 -220 2026 137 7 3 chr17 7183171 7183464 -78255016 + AluSx SINE Alu 1 294 -18 266 175 79 0 chr17 7183471 7183534 -78254946 - L2 LINE L2 -907 2407 2340 2278 109 3 3 chr17 7183535 7183846 -78254634 - AluSq SINE Alu -2 311 1 1416 157 7 19 chr17 7183967 7184265 -78254215 + MER61C LTR ERV1 17 404 -30 875 258 40 6 chr17 7184266 7184363 -78254117 + L1M4 LINE L1 1368 1460 -5082 2351 89 0 43 chr17 7184363 7184689 -78253791 + AluSx SINE Alu 1 312 0 875 258 40 6 chr17 7184689 7184913 -78253567 + L1M4 LINE L1 1460 1700 -4842 * 1069 204 28 34 chr17 7184894 7184926 -78253554 + L1MB8 LINE L1 5709 5740 -438 2229 107 10 7 chr17 7184926 7185236 -78253244 + AluSx SINE Alu 1 311 -1 1069 204 28 34 chr17 7185236 7185527 -78252953 + L1MB8 LINE L1 5740 6030 -148 2284 102 10 13 chr17 7185527 7185832 -78252648 - AluSg SINE Alu -6 304 1 1850 120 25 11 chr17 7185832 7186114 -78252366 - AluSq SINE Alu -5 308 22 822 109 0 0 chr17 7186214 7186324 -78252156 + AluSg/x SINE Alu 195 304 -8 2070 94 3 74 chr17 7186340 7186649 -78251831 + AluSq SINE Alu 16 302 -11 727 243 36 61 chr17 7186672 7186772 -78251708 - MIR SINE MIR -20 242 141 1966 83 55 0 chr17 7186772 7187026 -78251454 - AluSq SINE Alu -45 268 1 727 243 36 61 chr17 7187026 7187172 -78251308 - MIR SINE MIR -121 141 2 291 328 94 43 chr17 7187258 7187655 -78250825 + L2 LINE L2 2457 2897 -375 771 204 0 0 chr17 7187655 7187787 -78250693 + FLAM_A SINE Alu 1 132 -1 291 328 94 43 chr17 7187787 7187985 -78250495 + L2 LINE L2 2897 3084 -188 787 268 43 16 chr17 7188190 7188444 -78250036 + MIR SINE MIR 2 262 0 183 129 32 0 chr17 7188580 7188611 -78249869 - MIR SINE MIR -112 150 119 257 289 33 8 chr17 7190815 7190885 -78247595 + C-rich Low_complexity Low_complexity 1 77 -47 204 40 0 0 chr17 7190885 7190910 -78247570 + (CCG)n Simple_repeat Simple_repeat 3 27 0 257 289 33 8 chr17 7190910 7190960 -78247520 + C-rich Low_complexity Low_complexity 77 124 0 180 0 0 0 chr17 7190979 7190999 -78247481 + (CCG)n Simple_repeat Simple_repeat 1 20 0 2634 39 0 3 chr17 7191727 7192033 -78246447 + AluY SINE Alu 1 305 -6 2048 110 7 29 chr17 7192162 7192470 -78246010 + AluSp SINE Alu 1 301 -12 1222 145 0 6 chr17 7192470 7192649 -78245831 + AluSp SINE Alu 134 311 -2 780 280 85 63 chr17 7196508 7196727 -78241753 - L2 LINE L2 -13 3300 3087 1864 82 0 0 chr17 7196727 7196993 -78241487 - AluSx SINE Alu 0 319 54 752 101 14 79 chr17 7196999 7197138 -78241342 - FLAM_C SINE Alu 0 133 4 780 280 85 63 chr17 7197138 7197594 -78240886 - L2 LINE L2 -230 3083 2583 313 278 56 0 chr17 7197716 7197806 -78240674 + L1ME LINE L1 4959 5053 -1093 545 262 150 30 chr17 7197989 7198301 -78240179 + L1ME LINE L1 5209 5583 -833 2218 109 7 0 chr17 7198301 7198595 -78239885 - AluSq SINE Alu -17 296 1 545 262 150 30 chr17 7198595 7198672 -78239808 + L1ME LINE L1 5583 5649 -767 980 292 128 42 chr17 7198694 7199292 -78239188 + L2 LINE L2 2370 2916 -397 1458 104 54 117 chr17 7199292 7199408 -78239072 - AluJo SINE Alu -15 297 175 2048 129 7 0 chr17 7199408 7199688 -78238792 + AluSg SINE Alu 17 298 -12 2512 67 0 0 chr17 7199688 7199987 -78238493 + AluY SINE Alu 1 299 -12 1458 104 54 117 chr17 7199987 7200186 -78238294 - AluJo SINE Alu -135 177 1 980 292 128 42 chr17 7200186 7200451 -78238029 + L2 LINE L2 2916 3313 0 372 340 49 14 chr17 7200452 7200596 -78237884 + L1ME LINE L1 5653 5801 -320 1779 202 104 49 chr17 7200613 7201073 -78237407 + MER119 DNA MER1_type 5 501 -82 1949 138 7 10 chr17 7201073 7201363 -78237117 - AluSx SINE Alu -23 289 1 1779 202 104 49 chr17 7201363 7201451 -78237029 + MER119 DNA MER1_type 501 583 0 786 145 0 30 chr17 7201549 7201680 -78236800 + FLAM_C SINE Alu 9 135 -8 1451 186 0 0 chr17 7201682 7201918 -78236562 + AluSq SINE Alu 1 236 -77 2114 127 0 17 chr17 7202449 7202749 -78235731 - AluSg SINE Alu -15 295 1 1073 96 0 0 chr17 7202749 7202885 -78235595 - AluSq/x SINE Alu -176 136 1 711 290 125 8 chr17 7202981 7203229 -78235251 - L2 LINE L2 -4 3268 2992 2164 134 16 0 chr17 7203575 7203882 -78234598 + AluSx SINE Alu 1 312 0 562 298 110 44 chr17 7204468 7204787 -78233693 - L2 LINE L2 -8 3264 2925 40 0 0 0 chr17 7204966 7205006 -78233474 + AT_rich Low_complexity Low_complexity 1 40 0 442 63 48 16 chr17 7205210 7205273 -78233207 + Alu SINE Alu 226 290 -20 213 405 46 6 chr17 7205503 7205676 -78232804 - L2 LINE L2 -905 2409 2230 549 163 163 57 chr17 7205683 7205824 -78232656 - Tigger1 DNA MER2_type 0 2418 2263 2322 89 0 7 chr17 7205827 7206130 -78232350 - AluSx SINE Alu -11 301 1 2226 84 20 0 chr17 7206296 7206595 -78231885 + AluSc SINE Alu 1 305 -4 293 245 70 77 chr17 7208424 7208567 -78229913 + MIR SINE MIR 47 188 -74 182 357 56 8 chr17 7209770 7209896 -78228584 + L2 LINE L2 3137 3268 -4 2064 111 0 26 chr17 7209935 7210241 -78228239 - AluSx SINE Alu -8 304 7 2481 50 0 3 chr17 7211182 7211483 -78226997 + AluY SINE Alu 1 300 -11 1874 146 7 0 chr17 7211491 7211778 -78226702 + AluSq SINE Alu 1 289 -24 310 346 19 43 chr17 7215208 7215462 -78223018 - MIR SINE MIR 0 262 16 1877 97 43 18 chr17 7215500 7215778 -78222702 + AluSg SINE Alu 1 285 -25 26 0 0 0 chr17 7215916 7215942 -78222538 + AT_rich Low_complexity Low_complexity 1 26 0 3398 180 48 24 chr17 7215950 7215997 -78222483 + L1MB7 LINE L1 4456 4500 -1646 2059 112 14 0 chr17 7215997 7216293 -78222187 + AluSp SINE Alu 1 300 -13 3398 180 48 24 chr17 7216293 7217118 -78221362 + L1MB7 LINE L1 4500 5349 -797 2218 105 3 0 chr17 7217120 7217426 -78221054 + AluSp SINE Alu 1 307 -6 1069 45 0 8 chr17 7217428 7217560 -78220920 + AluY SINE Alu 1 131 -180 1941 184 89 49 chr17 7217574 7218050 -78220430 + L1MB7 LINE L1 5338 5793 -391 1509 151 50 14 chr17 7218050 7218328 -78220152 + AluSx SINE Alu 8 295 -17 1704 159 28 14 chr17 7218337 7218627 -78219853 + AluJb SINE Alu 1 294 -18 1941 184 89 49 chr17 7218627 7218656 -78219824 + L1MB7 LINE L1 5800 5753 -431 697 207 0 0 chr17 7218656 7218772 -78219708 + FLAM_C SINE Alu 2 117 -16 1941 184 89 49 chr17 7218772 7218851 -78219629 + L1MB7 LINE L1 5752 5826 -358 2119 93 7 14 chr17 7218969 7219260 -78219220 + AluSx SINE Alu 1 289 -23 2115 127 0 3 chr17 7219811 7220119 -78218361 + AluSq SINE Alu 3 309 -4 1495 64 11 0 chr17 7221010 7221197 -78217283 + AluSp SINE Alu 1 189 -124 2198 96 10 0 chr17 7221630 7221931 -78216549 + AluSp SINE Alu 1 304 -9 672 144 0 18 chr17 7222254 7222365 -78216115 + AluSg/x SINE Alu 190 298 -14 383 276 0 42 chr17 7224462 7224781 -78213699 + (CCCA)n Simple_repeat Simple_repeat 1 305 0 200 324 0 41 chr17 7225178 7225348 -78213132 + (CCCA)n Simple_repeat Simple_repeat 1 163 0 237 307 57 11 chr17 7226026 7226114 -78212366 - L2 LINE L2 -27 3286 3195 268 295 57 16 chr17 7226143 7226265 -78212215 - L1ME4a LINE L1 -28 6093 5967 1977 135 10 3 chr17 7226479 7226783 -78211697 - AluSx SINE Alu -6 306 1 372 186 21 52 chr17 7226785 7226882 -78211598 - L1MDa LINE L1 -4595 1945 1852 325 184 23 46 chr17 7226892 7226979 -78211501 - LTR9 LTR ERV1 -86 526 442 344 281 79 14 chr17 7226992 7227131 -78211349 - L1MDa LINE L1 -4707 1833 1686 248 185 37 0 chr17 7227131 7227185 -78211295 - MLT2B2 LTR ERVL 0 515 460 2230 189 23 63 chr17 7227279 7227754 -78210726 - MLT2B2 LTR ERVL -58 457 2 351 304 41 50 chr17 7227756 7227855 -78210625 - L1MDa LINE L1 -4853 1687 1589 2240 91 0 0 chr17 7227855 7228152 -78210328 - AluY SINE Alu -14 297 1 351 304 41 50 chr17 7228152 7228272 -78210208 - L1MDa LINE L1 -4951 1589 1470 1886 123 13 51 chr17 7228277 7228593 -78209887 - AluSq SINE Alu -9 304 1 192 40 0 0 chr17 7228603 7228628 -78209852 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 2421 60 0 0 chr17 7228657 7228958 -78209522 - AluY SINE Alu -10 301 1 965 227 152 4 chr17 7228961 7229225 -78209255 + MER82 DNA MER2_type 351 653 0 1821 151 14 0 chr17 7229292 7229577 -78208903 - AluJb SINE Alu -23 289 1 1963 129 23 7 chr17 7229584 7229887 -78208593 - AluSc SINE Alu -1 308 1 381 43 0 0 chr17 7229990 7230037 -78208443 + (TA)n Simple_repeat Simple_repeat 1 47 0 1851 124 9 46 chr17 7230037 7230350 -78208130 - AluSx SINE Alu -8 304 2 520 245 86 48 chr17 7230414 7230505 -78207975 - L1M4 LINE L1 -3700 2446 2360 2207 114 0 0 chr17 7230505 7230811 -78207669 - AluSx SINE Alu -6 306 1 520 245 86 48 chr17 7230811 7231033 -78207447 - L1M4 LINE L1 -3786 2360 2121 32 67 0 0 chr17 7231189 7231249 -78207231 + AT_rich Low_complexity Low_complexity 1 60 0 857 226 6 0 chr17 7231268 7231432 -78207048 + AluJb SINE Alu 121 285 -27 21 0 0 0 chr17 7232088 7232109 -78206371 + GC_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr17 7232316 7232337 -78206143 + GC_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr17 7234412 7234440 -78204040 + GC_rich Low_complexity Low_complexity 1 28 0 206 175 0 18 chr17 7234459 7234516 -78203964 + (CCG)n Simple_repeat Simple_repeat 3 58 0 189 0 0 0 chr17 7234949 7234970 -78203510 + (CAAAAA)n Simple_repeat Simple_repeat 2 22 0 30 27 0 0 chr17 7235959 7235996 -78202484 + GC_rich Low_complexity Low_complexity 1 37 0 237 33 0 0 chr17 7237083 7237113 -78201367 + (CAGA)n Simple_repeat Simple_repeat 3 32 0 203 328 0 0 chr17 7237313 7237377 -78201103 + C-rich Low_complexity Low_complexity 5 68 0 875 143 0 0 chr17 7238451 7238584 -78199896 - AluSq/x SINE Alu -179 133 1 307 285 49 8 chr17 7242361 7242484 -78195996 + MER112 DNA MER1_type 34 161 -99 507 17 0 0 chr17 7242484 7242544 -78195936 + (TG)n Simple_repeat Simple_repeat 1 60 0 559 167 0 53 chr17 7242548 7242662 -78195818 - FLAM_C SINE Alu -34 109 2 297 268 12 0 chr17 7242663 7242745 -78195735 + MER112 DNA MER1_type 166 248 -12 368 348 6 25 chr17 7242750 7242908 -78195572 - MIR3 SINE MIR -39 169 15 29 47 0 0 chr17 7243141 7243184 -78195296 + GC_rich Low_complexity Low_complexity 1 43 0 2190 97 16 3 chr17 7243967 7244275 -78194205 + AluSq SINE Alu 2 313 0 2267 83 3 3 chr17 7244276 7244577 -78193903 + AluSq SINE Alu 1 301 -12 2492 53 0 0 chr17 7245277 7245576 -78192904 - AluY SINE Alu -12 299 1 815 169 0 0 chr17 7245692 7245816 -78192664 + AluJb SINE Alu 162 285 -27 839 145 0 0 chr17 7245820 7245944 -78192536 - FLAM_C SINE Alu -19 124 1 2326 86 3 0 chr17 7246550 7246854 -78191626 - AluSq SINE Alu -8 305 1 2475 49 3 0 chr17 7247801 7248108 -78190372 - AluSx SINE Alu -4 308 1 407 276 32 32 chr17 7248751 7248790 -78189690 + L2 LINE L2 3190 3228 -85 2376 65 3 0 chr17 7248790 7249084 -78189396 + AluSp SINE Alu 1 295 -18 407 276 32 32 chr17 7249084 7249167 -78189313 + L2 LINE L2 3227 3312 -1 788 186 0 0 chr17 7249210 7249339 -78189141 + FLAM_C SINE Alu 2 130 -3 321 282 64 9 chr17 7249536 7249646 -78188834 + MIR SINE MIR 96 211 -51 2104 102 0 0 chr17 7249724 7250009 -78188471 - AluSg SINE Alu -9 301 17 850 142 0 0 chr17 7250112 7250232 -78188248 - FLAM_C SINE Alu -23 120 1 2203 103 7 0 chr17 7250261 7250562 -78187918 + AluSq SINE Alu 3 305 -8 247 303 63 42 chr17 7250565 7250707 -78187773 + MER102b DNA MER1_type 169 313 -28 210 200 20 0 chr17 7251746 7251796 -78186684 + (TA)n Simple_repeat Simple_repeat 1 51 0 369 141 0 0 chr17 7254774 7254845 -78183635 + (TCC)n Simple_repeat Simple_repeat 2 72 0 740 83 28 0 chr17 7256098 7256206 -78182274 + AluSg/x SINE Alu 198 308 -1 2289 85 0 29 chr17 7256309 7256625 -78181855 + AluSx SINE Alu 1 307 -5 2557 50 0 0 chr17 7256629 7256931 -78181549 + AluY SINE Alu 2 303 -8 2053 97 13 32 chr17 7256932 7257243 -78181237 + AluSg SINE Alu 2 306 -4 615 152 20 0 chr17 7257243 7257342 -78181138 - AluJo/FLAM SINE Alu -187 125 25 432 161 0 0 chr17 7258221 7258302 -78180178 + GA-rich Low_complexity Low_complexity 3 83 0 2224 77 0 26 chr17 7259841 7260151 -78178329 + AluSq SINE Alu 1 302 -11 817 111 8 0 chr17 7260921 7261038 -78177442 - AluSg/x SINE Alu -13 299 182 1817 125 22 47 chr17 7261570 7261889 -78176591 + AluSx SINE Alu 1 311 -1 2182 103 3 0 chr17 7261891 7262192 -78176288 + AluSc SINE Alu 1 302 -7 2044 143 0 0 chr17 7262204 7262498 -78175982 + AluJo SINE Alu 1 294 -18 2159 109 0 7 chr17 7262500 7262802 -78175678 + AluSq SINE Alu 1 300 -13 439 353 0 0 chr17 7262806 7262928 -78175552 - MIR SINE MIR -136 126 5 322 331 190 0 chr17 7262981 7263123 -78175357 - MER91A DNA MER1_type -22 174 6 1271 152 0 14 chr17 7263279 7263489 -78174991 - AluJo SINE Alu -19 293 87 198 329 0 14 chr17 7263492 7263565 -78174915 - MIR SINE MIR -21 241 170 657 197 16 8 chr17 7263749 7263871 -78174609 + MIR SINE MIR 76 198 -64 425 295 98 6 chr17 7264095 7264278 -78174202 + L2 LINE L2 2942 3141 -172 2320 81 0 0 chr17 7264279 7264577 -78173903 - AluSg SINE Alu -12 298 1 926 135 0 14 chr17 7264578 7264719 -78173761 - AluSq/x SINE Alu -173 139 1 1840 166 3 10 chr17 7264720 7265033 -78173447 - AluJb SINE Alu -1 311 1 2055 78 0 32 chr17 7265040 7265200 -78173280 - AluSx SINE Alu -15 297 148 2413 56 0 10 chr17 7265200 7265503 -78172977 - AluY SINE Alu -11 300 1 2055 78 0 32 chr17 7265503 7265626 -78172854 - AluSx SINE Alu -164 148 23 1713 179 0 10 chr17 7265637 7265938 -78172542 - AluJb SINE Alu -14 298 1 2068 115 0 38 chr17 7265993 7266307 -78172173 - AluSx SINE Alu -8 304 3 1782 167 3 10 chr17 7266309 7266609 -78171871 - AluJb SINE Alu -14 298 1 332 241 0 80 chr17 7266610 7266722 -78171758 + L2 LINE L2 3210 3312 -1 821 93 0 0 chr17 7266821 7266928 -78171552 + AluSq/x SINE Alu 1 107 -205 430 341 0 0 chr17 7268967 7269143 -78169337 + (CTGGGG)n Simple_repeat Simple_repeat 3 178 0 214 278 17 17 chr17 7269183 7269298 -78169182 + (CTGGGG)n Simple_repeat Simple_repeat 1 115 0 356 309 6 23 chr17 7269318 7269493 -78168987 + (CTGGGG)n Simple_repeat Simple_repeat 2 173 0 1857 100 55 52 chr17 7270817 7271023 -78167457 - AluSx SINE Alu -1 311 102 2321 89 0 7 chr17 7271023 7271327 -78167153 - AluY SINE Alu -9 302 1 1857 100 55 52 chr17 7271327 7271430 -78167050 - AluSx SINE Alu -210 102 1 237 178 0 0 chr17 7273012 7273057 -78165423 + (CGG)n Simple_repeat Simple_repeat 3 47 0 2012 123 18 0 chr17 7274517 7274802 -78163678 + AluSx SINE Alu 1 290 -22 609 14 0 0 chr17 7274803 7274873 -78163607 + (GGAA)n Simple_repeat Simple_repeat 3 72 0 1781 110 88 0 chr17 7274877 7275175 -78163305 + AluSx SINE Alu 2 323 0 298 325 16 16 chr17 7275735 7275858 -78162622 + MIR SINE MIR 73 195 -67 2430 71 0 19 chr17 7275880 7276191 -78162289 - AluY SINE Alu -6 305 1 2039 78 13 49 chr17 7276191 7276498 -78161982 - AluY SINE Alu -15 296 1 971 155 25 6 chr17 7276782 7276943 -78161537 + AluJb SINE Alu 120 283 -29 1336 160 53 97 chr17 7276963 7277100 -78161380 + AluJo SINE Alu 3 144 -168 1983 129 0 7 chr17 7277100 7277394 -78161086 + AluSx SINE Alu 5 296 -16 1336 160 53 97 chr17 7277394 7277426 -78161054 + AluJo SINE Alu 144 176 -136 180 0 0 0 chr17 7277426 7277446 -78161034 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1336 160 53 97 chr17 7277446 7277594 -78160886 + AluJo SINE Alu 176 307 -5 224 208 21 0 chr17 7281170 7281218 -78157262 + G-rich Low_complexity Low_complexity 1 49 0 250 289 0 10 chr17 7281632 7281736 -78156744 + G-rich Low_complexity Low_complexity 3 105 0 290 287 22 39 chr17 7282556 7282737 -78155743 + (CAGA)n Simple_repeat Simple_repeat 3 180 0 * 307 279 12 43 chr17 7282688 7282849 -78155631 + (CAGAGA)n Simple_repeat Simple_repeat 4 159 0 244 273 45 0 chr17 7283117 7283183 -78155297 + L2 LINE L2 3210 3278 -35 328 159 16 0 chr17 7285469 7285532 -78152948 - MER61-int LTR ERV1 -239 4978 4915 2006 99 64 3 chr17 7285532 7285814 -78152666 + AluSx SINE Alu 1 299 -13 1892 97 44 69 chr17 7285817 7286136 -78152344 + AluSq SINE Alu 3 313 0 6060 110 7 8 chr17 7286138 7287092 -78151388 - MER61-int LTR ERV1 -631 4586 3634 1973 114 61 7 chr17 7287100 7287397 -78151083 - AluSp SINE Alu 0 313 1 320 176 0 14 chr17 7287402 7287476 -78151004 + C-rich Low_complexity Low_complexity 1 73 0 1921 136 0 4 chr17 7287485 7287765 -78150715 - AluSx SINE Alu -33 279 1 5706 96 6 22 chr17 7287765 7288394 -78150086 - MER61-int LTR ERV1 -1586 3631 3018 2424 58 0 0 chr17 7288394 7288689 -78149791 - AluY SINE Alu -16 295 1 5706 96 6 22 chr17 7288689 7288966 -78149514 - MER61-int LTR ERV1 -2199 3018 2738 2899 55 3 31 chr17 7288966 7289081 -78149399 - L1PA8 LINE L1 -2 6170 6053 2066 101 7 7 chr17 7289081 7289096 -78149384 - AluSp SINE Alu -17 296 282 270 0 0 0 chr17 7289096 7289126 -78149354 + (TG)n Simple_repeat Simple_repeat 1 30 0 198 0 0 0 chr17 7289125 7289147 -78149333 + (GA)n Simple_repeat Simple_repeat 1 22 0 * 2066 101 7 7 chr17 7289126 7289427 -78149053 - AluSp SINE Alu -30 283 1 2899 55 3 31 chr17 7289427 7289692 -78148788 - L1PA8 LINE L1 -119 6053 5801 581 297 110 78 chr17 7340499 7340843 -78097637 + L2 LINE L2 1598 1929 -1385 2337 103 0 0 chr17 7340843 7341145 -78097335 - AluSx SINE Alu -9 303 2 581 297 110 78 chr17 7341145 7341671 -78096809 + L2 LINE L2 1929 2496 -818 755 212 29 0 chr17 7341782 7341952 -78096528 - Charlie8 DNA MER1_type -2157 260 86 2646 40 0 0 chr17 7342087 7342383 -78096097 - AluY SINE Alu -15 296 1 332 280 89 78 chr17 7342415 7342616 -78095864 + L1M4 LINE L1 4214 4420 -1726 315 0 0 0 chr17 7342616 7342651 -78095829 + (TG)n Simple_repeat Simple_repeat 2 36 0 332 280 89 78 chr17 7342651 7342706 -78095774 + L1M4 LINE L1 4420 4473 -1673 808 203 7 13 chr17 7342706 7342859 -78095621 + AluJb SINE Alu 134 285 -27 267 31 0 0 chr17 7342859 7342891 -78095589 + (CA)n Simple_repeat Simple_repeat 2 33 0 782 293 150 49 chr17 7342899 7343387 -78095093 + L1M4 LINE L1 4519 5055 -1091 29 0 0 0 chr17 7343387 7343416 -78095064 + AT_rich Low_complexity Low_complexity 1 29 0 595 156 0 2 chr17 7343419 7343695 -78094785 + AluSx SINE Alu 1 325 0 252 221 15 0 chr17 7344132 7344200 -78094280 + HAL1 LINE L1 840 908 -1599 837 204 171 24 chr17 7344214 7344548 -78093932 + HAL1 LINE L1 1581 1963 -544 538 133 7 156 chr17 7344629 7344764 -78093716 + AluSq/x SINE Alu 2 116 -196 207 100 0 0 chr17 7344765 7344795 -78093685 + (TAA)n Simple_repeat Simple_repeat 2 31 0 2324 88 0 7 chr17 7344802 7345097 -78093383 - AluSg SINE Alu -17 293 1 400 290 49 11 chr17 7345098 7345281 -78093199 + HAL1 LINE L1 2029 2218 -289 2533 83 3 0 chr17 7345473 7345785 -78092695 - AluSp SINE Alu 0 313 1 1907 158 3 3 chr17 7346016 7346319 -78092161 + AluJb SINE Alu 1 303 -9 352 242 25 50 chr17 7347381 7347542 -78090938 + L1MC4a LINE L1 5734 5890 -1918 709 112 103 26 chr17 7347547 7347663 -78090817 + FLAM_C SINE Alu 5 129 -4 2551 79 0 0 chr17 7347798 7348102 -78090378 - AluSq SINE Alu -4 309 6 337 272 97 61 chr17 7348800 7348914 -78089566 - MIR SINE MIR -122 140 23 1861 125 96 0 chr17 7348992 7349272 -78089208 - AluJo SINE Alu 0 312 6 1107 80 12 19 chr17 7349286 7349448 -78089032 - L1PA13 LINE L1 0 6163 6003 2387 99 0 0 chr17 7349517 7349819 -78088661 + AluSx SINE Alu 1 302 -10 1845 77 0 0 chr17 7350493 7350714 -78087766 - AluSg/x SINE Alu -5 307 87 348 221 77 10 chr17 7350831 7350935 -78087545 + L2 LINE L2 3199 3309 -4 2103 124 7 0 chr17 7351130 7351428 -78087052 - AluJb SINE Alu -12 300 1 2180 132 0 3 chr17 7352361 7352664 -78085816 - AluSx SINE Alu -10 302 1 2441 85 7 0 chr17 7352849 7353155 -78085325 + AluSp SINE Alu 1 308 -5 2456 70 0 3 chr17 7353155 7353606 -78084874 + AluY SINE Alu 1 451 0 804 292 29 0 chr17 7354484 7354693 -78083787 - MIR SINE MIR -20 242 28 2384 79 0 0 chr17 7355384 7355688 -78082792 - AluSx SINE Alu -8 304 1 2293 76 0 19 chr17 7356183 7356500 -78081980 + AluY SINE Alu 1 311 0 2238 109 0 0 chr17 7357809 7358112 -78080368 - AluSq SINE Alu -10 303 1 792 125 117 0 chr17 7358639 7358759 -78079721 + AluJo SINE Alu 3 136 -176 2318 86 0 0 chr17 7358759 7359063 -78079417 + AluSx SINE Alu 1 304 -8 1903 139 36 3 chr17 7359073 7359375 -78079105 + AluJb SINE Alu 1 312 0 2235 94 3 22 chr17 7359382 7359700 -78078780 + AluSx SINE Alu 1 312 0 2351 90 0 3 chr17 7361035 7361345 -78077135 + AluSg SINE Alu 1 309 -1 418 226 59 0 chr17 7361926 7362028 -78076452 + L2 LINE L2 3205 3312 -1 2297 105 0 0 chr17 7362353 7362659 -78075821 - AluSx SINE Alu -6 306 1 2393 93 0 0 chr17 7362755 7363065 -78075415 - AluSp SINE Alu -3 310 1 1067 218 102 18 chr17 7363099 7363540 -78074940 - HAL1b LINE L1 0 1348 871 312 265 147 0 chr17 7363535 7363637 -78074843 - L1MC4 LINE L1 -359 7683 7567 * 2147 113 0 10 chr17 7363637 7363650 -78074830 - AluSx SINE Alu -5 307 295 257 0 30 0 chr17 7363650 7363683 -78074797 + (TTTAA)n Simple_repeat Simple_repeat 2 35 0 2147 113 0 10 chr17 7363683 7363979 -78074501 - AluSx SINE Alu -17 295 1 780 83 0 50 chr17 7363984 7364104 -78074376 - AluSg/x SINE Alu -9 300 187 433 256 7 29 chr17 7364104 7364241 -78074239 - L1MC4 LINE L1 -465 7577 7444 273 251 161 35 chr17 7364287 7364486 -78073994 - HAL1b LINE L1 -1055 293 70 2180 85 3 0 chr17 7365082 7365385 -78073095 + AluSp SINE Alu 1 304 0 741 177 0 8 chr17 7365405 7365535 -78072945 - FLAM_A SINE Alu -1 141 13 2110 124 0 0 chr17 7365798 7366097 -78072383 - AluJb SINE Alu -1 311 13 345 361 50 41 chr17 7366123 7366342 -78072138 - L1M4 LINE L1 -1593 4553 4333 334 209 77 11 chr17 7366373 7366464 -78072016 - U6 snRNA snRNA -9 98 2 326 278 40 48 chr17 7366492 7366618 -78071862 - L1MC4 LINE L1 0 8042 7918 347 330 86 40 chr17 7366804 7367030 -78071450 + L2 LINE L2 2934 3179 -93 2345 81 0 13 chr17 7367030 7367340 -78071140 - AluSc SINE Alu -3 306 1 347 330 86 40 chr17 7367340 7367416 -78071064 + L2 LINE L2 3179 3250 -22 225 0 0 0 chr17 7367884 7367909 -78070571 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 2210 98 3 0 chr17 7368209 7368504 -78069976 + AluSx SINE Alu 1 296 -16 2092 109 0 0 chr17 7368506 7368817 -78069663 + AluSx SINE Alu 1 311 0 338 329 72 83 chr17 7368886 7369063 -78069417 + L1ME4a LINE L1 5640 5817 -304 2040 97 0 58 chr17 7369063 7369371 -78069109 + AluSg SINE Alu 1 290 -20 338 329 72 83 chr17 7369371 7369422 -78069058 + L1ME4a LINE L1 5817 5867 -254 2153 117 0 0 chr17 7369422 7369730 -78068750 + AluSx SINE Alu 1 308 -4 338 329 72 83 chr17 7369730 7369769 -78068711 + L1ME4a LINE L1 5867 5905 -216 2009 140 0 3 chr17 7369769 7370069 -78068411 + AluSx SINE Alu 1 299 -13 338 329 72 83 chr17 7370069 7370155 -78068325 + L1ME4a LINE L1 5905 5990 -131 2092 101 9 25 chr17 7370155 7370473 -78068007 - AluSq SINE Alu 0 313 1 338 329 72 83 chr17 7370473 7370587 -78067893 + L1ME4a LINE L1 5990 6105 -16 2206 106 3 0 chr17 7371240 7371543 -78066937 + AluSx SINE Alu 1 304 -8 2385 77 0 6 chr17 7371543 7371855 -78066625 + AluY SINE Alu 1 311 0 1690 210 75 5 chr17 7371874 7372274 -78066206 + L1MB5 LINE L1 5593 6020 -154 697 169 54 0 chr17 7372349 7372497 -78065983 + L1MB7 LINE L1 6029 6184 0 2054 110 3 23 chr17 7372507 7372817 -78065663 + AluSx SINE Alu 1 304 -8 2303 90 0 0 chr17 7373338 7373639 -78064841 + AluSx SINE Alu 1 301 -11 1153 142 0 0 chr17 7373639 7373815 -78064665 + AluSg/x SINE Alu 137 312 0 2257 102 0 3 chr17 7375383 7375686 -78062794 + AluSx SINE Alu 1 302 -10 222 347 7 20 chr17 7376823 7376970 -78061510 + C-rich Low_complexity Low_complexity 2 146 0 24 0 0 0 chr17 7377577 7377601 -78060879 + GC_rich Low_complexity Low_complexity 1 24 0 1762 89 155 4 chr17 7380321 7380592 -78057888 + AluSx SINE Alu 1 312 0 372 43 0 0 chr17 7380645 7380691 -78057789 + (CA)n Simple_repeat Simple_repeat 2 47 0 691 299 115 20 chr17 7381123 7381307 -78057173 + L2 LINE L2 2884 3049 -264 2021 94 0 14 chr17 7381307 7381630 -78056850 + AluSx SINE Alu 1 319 0 691 299 115 20 chr17 7381630 7381836 -78056644 + L2 LINE L2 3049 3312 -1 21 0 0 0 chr17 7383452 7383473 -78055007 + AT_rich Low_complexity Low_complexity 1 21 0 385 225 45 36 chr17 7388063 7388174 -78050306 - MIR SINE MIR -131 131 20 22 56 0 0 chr17 7389758 7389794 -78048686 + GC_rich Low_complexity Low_complexity 1 36 0 486 288 0 34 chr17 7390056 7390237 -78048243 - MIR3 SINE MIR -55 153 14 190 269 30 0 chr17 7392825 7392892 -78045588 + MIR SINE MIR 76 144 -118 1133 60 0 0 chr17 7393407 7393541 -78044939 + AluSx SINE Alu 1 134 -179 1969 129 14 0 chr17 7393543 7393837 -78044643 + AluSx SINE Alu 1 298 -14 1038 98 0 75 chr17 7394275 7394449 -78044031 - AluSx SINE Alu -151 161 1 1122 154 0 0 chr17 7394586 7394774 -78043706 + AluSx SINE Alu 124 311 -1 1826 148 20 3 chr17 7394779 7395083 -78043397 + AluJb SINE Alu 1 309 -3 796 66 0 16 chr17 7395272 7395394 -78043086 + (TA)n Simple_repeat Simple_repeat 2 121 0 795 315 89 40 chr17 7395932 7396000 -78042480 + L2 LINE L2 2826 2889 -424 2007 131 3 0 chr17 7396000 7396328 -78042152 - AluSx SINE Alu 0 329 1 1882 152 0 0 chr17 7396330 7396626 -78041854 - AluSx SINE Alu -16 296 1 795 315 89 40 chr17 7396626 7397001 -78041479 + L2 LINE L2 2889 3295 -18 2089 129 0 0 chr17 7397007 7397309 -78041171 + AluSx SINE Alu 1 302 -10 494 263 141 57 chr17 7399131 7399428 -78039052 - L2 LINE L2 -2 3311 2990 2696 211 99 40 chr17 7401289 7401519 -78036961 - L1ME2 LINE L1 0 6164 5949 2051 71 43 4 chr17 7401519 7401799 -78036681 + AluSq SINE Alu 1 291 -22 2696 211 99 40 chr17 7401799 7402791 -78035689 - L1ME2 LINE L1 -215 5949 4873 1663 161 37 3 chr17 7402841 7403139 -78035341 - AluJo SINE Alu -4 308 1 1417 224 56 105 chr17 7403185 7403245 -78035235 + L1M4 LINE L1 3554 3615 -2531 2114 130 3 0 chr17 7403245 7403552 -78034928 + AluSx SINE Alu 1 308 -4 1417 224 56 105 chr17 7403552 7403724 -78034756 + L1M4 LINE L1 3615 3794 -2352 2191 109 0 13 chr17 7403724 7403860 -78034620 + AluSx SINE Alu 1 137 -175 2241 79 14 0 chr17 7403860 7404151 -78034329 + AluSg SINE Alu 1 295 -15 2191 109 0 13 chr17 7404151 7404326 -78034154 + AluSx SINE Alu 137 308 -4 1417 224 56 105 chr17 7404326 7404385 -78034095 + L1M4 LINE L1 3794 3854 -2292 748 162 8 0 chr17 7404385 7404502 -78033978 + FLAM_C SINE Alu 1 118 -15 1417 224 56 105 chr17 7404502 7404742 -78033738 + L1M4 LINE L1 3854 4104 -2042 2385 60 6 19 chr17 7404742 7405056 -78033424 + AluY SINE Alu 2 311 0 1417 224 56 105 chr17 7405056 7405163 -78033317 + L1M4 LINE L1 4104 4215 -1931 2470 62 0 0 chr17 7405163 7405470 -78033010 + AluY SINE Alu 1 307 -4 1931 124 0 46 chr17 7405478 7405620 -78032860 + AluSq SINE Alu 6 153 -160 2360 74 0 3 chr17 7405620 7405917 -78032563 + AluSq SINE Alu 1 296 -17 1931 124 0 46 chr17 7405917 7406097 -78032383 + AluSq SINE Alu 153 313 0 1417 224 56 105 chr17 7406097 7406169 -78032311 + L1M4 LINE L1 4222 4296 -1850 1796 105 52 8 chr17 7406169 7406435 -78032045 + AluSq SINE Alu 1 278 -35 2100 102 12 46 chr17 7406435 7406758 -78031722 + AluSx SINE Alu 1 312 0 1417 224 56 105 chr17 7406436 7406836 -78031644 + L1M4 LINE L1 4296 4313 -1833 928 171 22 75 chr17 7406836 7407064 -78031416 + MER2 DNA MER2_type 2 217 -128 230 241 35 0 chr17 7407558 7407616 -78030864 - MIR SINE MIR -3 259 200 1927 124 14 3 chr17 7407643 7407977 -78030503 + AluSq SINE Alu 1 313 0 2355 73 13 0 chr17 7408039 7408340 -78030140 + AluSp SINE Alu 1 305 -8 1070 147 47 21 chr17 7408453 7408502 -78029978 + AluJo SINE Alu 88 134 -174 2165 114 0 16 chr17 7408502 7408819 -78029661 + AluSx SINE Alu 1 312 0 1070 147 47 21 chr17 7408819 7408985 -78029495 + AluJo SINE Alu 134 308 0 2107 112 6 3 chr17 7408992 7409304 -78029176 + AluSq SINE Alu 1 313 0 354 242 96 45 chr17 7409451 7409649 -78028831 - L2 LINE L2 -17 3296 3089 2108 118 3 0 chr17 7410020 7410317 -78028163 + AluSx SINE Alu 1 298 -14 210 285 134 45 chr17 7410318 7410497 -78027983 - L2 LINE L2 -1810 1504 1310 1941 146 0 13 chr17 7411558 7411867 -78026613 + AluJb SINE Alu 1 305 -7 218 280 21 54 chr17 7412489 7412582 -78025898 - MIR SINE MIR -70 192 103 2296 60 7 13 chr17 7412596 7412895 -78025585 + AluY SINE Alu 1 297 -14 844 112 0 0 chr17 7413986 7414111 -78024369 - MER47A DNA MER2_type 0 366 242 2165 82 0 51 chr17 7414111 7414427 -78024053 - AluSg SINE Alu -10 300 1 1121 179 28 14 chr17 7414439 7414657 -78023823 - AluJo SINE Alu -11 301 81 868 163 0 25 chr17 7414665 7414825 -78023655 - AluJb SINE Alu -24 288 133 236 53 26 0 chr17 7414825 7414863 -78023617 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 2234 78 0 0 chr17 7414863 7415146 -78023334 - AluSg SINE Alu -27 283 1 1522 192 31 3 chr17 7415148 7415440 -78023040 - AluJo SINE Alu -12 300 1 923 116 0 26 chr17 7415440 7415595 -78022885 - MER47A DNA MER2_type -116 250 100 2271 80 7 0 chr17 7415656 7415955 -78022525 + AluSx SINE Alu 1 301 -11 735 176 0 24 chr17 7415958 7416083 -78022397 + FLAM_A SINE Alu 5 126 -7 2019 138 0 0 chr17 7416084 7416382 -78022098 + AluSx SINE Alu 1 298 -14 521 217 0 19 chr17 7416397 7416503 -78021977 - MER47A DNA MER2_type -259 107 4 2147 80 23 13 chr17 7417058 7417360 -78021120 + AluSp SINE Alu 1 305 -8 246 320 58 10 chr17 7418011 7418114 -78020366 + MIR SINE MIR 110 217 -45 1853 159 10 0 chr17 7418399 7418708 -78019772 - AluJb SINE Alu 0 312 1 25 0 0 0 chr17 7419982 7420007 -78018473 + AT_rich Low_complexity Low_complexity 1 25 0 810 213 23 74 chr17 7420007 7420223 -78018257 - L1MA9 LINE L1 -2 6310 6106 2119 113 3 0 chr17 7420386 7420688 -78017792 + AluSq SINE Alu 1 303 -10 238 258 118 21 chr17 7420794 7420887 -78017593 - L2 LINE L2 -3 3310 3209 1208 113 0 6 chr17 7421023 7421200 -78017280 + AluSg/x SINE Alu 137 312 0 537 134 0 72 chr17 7421341 7421438 -78017042 + AluJo/FLAM SINE Alu 22 111 -201 2428 75 0 0 chr17 7421439 7421746 -78016734 - AluY SINE Alu -4 307 1 36 77 0 0 chr17 7421761 7421839 -78016641 + AT_rich Low_complexity Low_complexity 1 78 0 1988 101 61 7 chr17 7421855 7422151 -78016329 - AluSx SINE Alu 0 312 1 324 272 57 57 chr17 7422151 7422309 -78016171 + L1M4 LINE L1 3820 3977 -2169 1938 122 7 7 chr17 7422378 7422673 -78015807 + AluSx SINE Alu 1 295 -17 703 241 41 20 chr17 7422673 7422773 -78015707 + AluJo SINE Alu 11 107 -205 921 16 24 0 chr17 7422773 7422896 -78015584 + (TAGA)n Simple_repeat Simple_repeat 1 126 0 2142 100 0 7 chr17 7422900 7423200 -78015280 + AluSc SINE Alu 1 298 -11 703 241 41 20 chr17 7423200 7423289 -78015191 + AluJo SINE Alu 109 209 -103 24 22 0 43 chr17 7423317 7423338 -78015142 + AT_rich Low_complexity Low_complexity 1 21 -23 2103 99 7 0 chr17 7423338 7423632 -78014848 + AluSg SINE Alu 1 296 -14 24 22 0 43 chr17 7423632 7423656 -78014824 + AT_rich Low_complexity Low_complexity 21 44 0 1999 123 0 3 chr17 7423681 7423997 -78014483 - AluSg SINE Alu 0 310 1 244 0 27 27 chr17 7424087 7424124 -78014356 + (TTATA)n Simple_repeat Simple_repeat 5 41 0 544 292 92 71 chr17 7424158 7424332 -78014148 + L1M4 LINE L1 4217 4386 -1760 2011 144 7 0 chr17 7424332 7424637 -78013843 + AluSx SINE Alu 1 307 -5 544 292 92 71 chr17 7424637 7424910 -78013570 + L1M4 LINE L1 4386 4673 -1473 2030 100 4 4 chr17 7424947 7425226 -78013254 + AluSc SINE Alu 1 279 -30 1728 108 8 4 chr17 7425239 7425498 -78012982 + AluSx SINE Alu 44 303 -9 1937 145 0 3 chr17 7425505 7425816 -78012664 + AluSx SINE Alu 1 310 -2 23 54 0 0 chr17 7425817 7425854 -78012626 + AT_rich Low_complexity Low_complexity 1 37 0 2102 107 13 13 chr17 7425919 7426229 -78012251 + AluSq SINE Alu 4 313 0 2308 102 0 9 chr17 7426416 7426731 -78011749 - AluSp SINE Alu -1 312 1 2001 142 0 3 chr17 7426735 7427044 -78011436 - AluSx SINE Alu -4 308 1 1992 147 0 0 chr17 7427152 7427451 -78011029 + AluSx SINE Alu 1 299 -13 2068 132 0 0 chr17 7427523 7427833 -78010647 + AluSx SINE Alu 1 310 -2 2160 105 10 3 chr17 7428231 7428535 -78009945 - AluSq SINE Alu -7 306 1 2241 75 3 23 chr17 7428581 7428886 -78009594 - AluSq SINE Alu -14 299 1 295 341 117 40 chr17 7428975 7429248 -78009232 + L2 LINE L2 3003 3296 -17 22 0 0 0 chr17 7429495 7429517 -78008963 + AT_rich Low_complexity Low_complexity 1 22 0 219 36 0 0 chr17 7429847 7429875 -78008605 + (TTTTTG)n Simple_repeat Simple_repeat 3 30 0 2120 77 0 74 chr17 7430275 7430601 -78007879 + AluSp SINE Alu 1 302 -11 204 208 0 0 chr17 7430975 7431023 -78007457 + (TGGG)n Simple_repeat Simple_repeat 1 48 0 212 162 0 0 chr17 7431863 7431900 -78006580 + (TG)n Simple_repeat Simple_repeat 2 38 0 751 111 19 0 chr17 7432708 7432816 -78005664 + FLAM_A SINE Alu 22 131 -11 314 231 108 39 chr17 7437110 7437240 -78001240 - L2 LINE L2 -10 3262 3124 2167 105 0 13 chr17 7437264 7437398 -78001082 + AluSg SINE Alu 1 135 -175 2295 56 13 20 chr17 7437398 7437701 -78000779 + AluY SINE Alu 1 301 -10 2167 105 0 13 chr17 7437701 7437872 -78000608 + AluSg SINE Alu 135 302 -8 1909 101 10 68 chr17 7437882 7438190 -78000290 + AluSq SINE Alu 1 290 -23 198 0 0 0 chr17 7438200 7438222 -78000258 + (TGAA)n Simple_repeat Simple_repeat 1 22 0 478 395 47 13 chr17 7438252 7438551 -77999929 - L2 LINE L2 -345 2969 2661 656 189 20 59 chr17 7438551 7438659 -77999821 - MER45 DNA AcHobo 0 1581 1479 1928 126 40 3 chr17 7438659 7438960 -77999520 - AluSx SINE Alu 0 312 1 656 189 20 59 chr17 7438960 7439004 -77999476 - MER45 DNA AcHobo -102 1479 1435 1875 143 0 27 chr17 7439004 7439305 -77999175 - AluSx SINE Alu -18 294 2 325 222 37 37 chr17 7439314 7439395 -77999085 - AluJ SINE Alu -102 200 120 2404 70 0 0 chr17 7439419 7439717 -77998763 - AluSg SINE Alu -12 298 1 643 140 28 9 chr17 7439760 7439867 -77998613 - AluJ SINE Alu -195 117 9 1347 199 41 8 chr17 7439867 7440133 -77998347 - MER45B DNA AcHobo -425 615 341 1018 143 82 152 chr17 7440133 7440448 -77998032 - AluJo SINE Alu -7 305 13 1158 211 97 100 chr17 7440519 7440870 -77997610 - MER45B DNA AcHobo -690 350 1 2064 134 3 0 chr17 7441030 7441328 -77997152 - AluSx SINE Alu -13 299 1 238 272 247 19 chr17 7441384 7441450 -77997030 - L2 LINE L2 -93 3220 3170 1917 128 11 0 chr17 7441450 7441774 -77996706 - AluSx SINE Alu 0 327 1 238 272 247 19 chr17 7441774 7441864 -77996616 - L2 LINE L2 -143 3170 3027 2019 120 13 0 chr17 7441864 7442164 -77996316 - AluSx SINE Alu -8 304 1 499 184 23 0 chr17 7442169 7442256 -77996224 - FRAM SINE Alu -17 159 71 1096 149 80 0 chr17 7442578 7442766 -77995714 + AluSx SINE Alu 1 203 -109 520 82 27 0 chr17 7442766 7442839 -77995641 + AluSq/x SINE Alu 69 143 -170 1782 117 68 7 chr17 7442839 7443120 -77995360 + AluSg SINE Alu 1 298 -12 2246 88 3 0 chr17 7443120 7443414 -77995066 + AluSp SINE Alu 1 297 -16 2051 65 79 0 chr17 7443415 7443692 -77994788 + AluY SINE Alu 1 299 -12 1877 96 40 63 chr17 7443695 7443786 -77994694 + AluSx SINE Alu 1 93 -219 2290 81 7 0 chr17 7443786 7444095 -77994385 + AluSp SINE Alu 2 312 -1 1877 96 40 63 chr17 7444095 7444305 -77994175 + AluSx SINE Alu 93 295 -17 7059 110 177 90 chr17 7444981 7446541 -77991939 - pTR5 LTR ERV1 0 2438 743 866 139 0 13 chr17 7446674 7446832 -77991648 + L1MB3 LINE L1 5987 6142 -41 893 112 0 0 chr17 7446833 7446958 -77991522 + AluSg/x SINE Alu 173 297 -13 633 128 128 9 chr17 7446970 7447079 -77991401 + AluJb SINE Alu 3 124 -188 365 109 0 47 chr17 7447079 7447091 -77991389 + L1MB2 LINE L1 6111 6122 -49 1866 164 0 10 chr17 7447091 7447226 -77991254 + AluSx SINE Alu 1 136 -176 2069 77 60 0 chr17 7447226 7447511 -77990969 + AluSx SINE Alu 1 302 -10 1866 164 0 10 chr17 7447511 7447674 -77990806 + AluSx SINE Alu 136 296 -16 365 109 0 47 chr17 7447674 7447725 -77990755 + L1MB2 LINE L1 6122 6171 0 901 193 0 23 chr17 7447768 7447944 -77990536 + AluJo SINE Alu 1 172 -140 212 169 34 51 chr17 7447991 7448026 -77990454 + A-rich Low_complexity Low_complexity 2 36 -23 2077 127 3 3 chr17 7448026 7448325 -77990155 + AluSx SINE Alu 1 299 -13 2216 116 0 0 chr17 7448325 7448635 -77989845 + AluY SINE Alu 1 310 -1 212 169 34 51 chr17 7448635 7448657 -77989823 + A-rich Low_complexity Low_complexity 34 59 0 445 282 65 24 chr17 7448914 7449084 -77989396 - MIR SINE MIR -12 250 74 2095 128 0 3 chr17 7449090 7449403 -77989077 - AluSx SINE Alu 0 312 1 2226 116 0 0 chr17 7449517 7449819 -77988661 + AluSx SINE Alu 1 302 -10 2154 122 0 0 chr17 7449819 7450115 -77988365 + AluSx SINE Alu 1 296 -16 2304 78 0 0 chr17 7450115 7450411 -77988069 + AluY SINE Alu 1 296 -15 457 272 117 31 chr17 7450965 7451222 -77987258 + L2 LINE L2 2951 3229 -84 1402 61 4 2 chr17 7451224 7451488 -77986992 - AluY SINE Alu 0 311 2 335 243 0 0 chr17 7451488 7451558 -77986922 + L2 LINE L2 3179 3248 -24 2203 98 0 10 chr17 7451939 7452259 -77986221 - AluSx SINE Alu 0 312 1 2321 69 0 10 chr17 7452966 7453272 -77985208 + AluSq SINE Alu 1 303 -10 513 308 68 43 chr17 7453276 7453338 -77985142 + L2 LINE L2 3028 3087 -226 2447 64 0 3 chr17 7453338 7453650 -77984830 - AluY SINE Alu 0 311 1 513 308 68 43 chr17 7453650 7453866 -77984614 + L2 LINE L2 3087 3313 0 1566 164 27 7 chr17 7454793 7455091 -77983389 - AluJo SINE Alu -8 304 1 241 287 37 28 chr17 7456197 7456305 -77982175 + MIR SINE MIR 99 207 -55 195 129 0 0 chr17 7457019 7457050 -77981430 + (CAG)n Simple_repeat Simple_repeat 3 33 0 531 213 66 29 chr17 7457511 7457647 -77980833 + MIR SINE MIR 74 214 -48 369 0 0 0 chr17 7457839 7457880 -77980600 + (TTTTA)n Simple_repeat Simple_repeat 1 41 0 1747 140 0 18 chr17 7457880 7458165 -77980315 - AluSx SINE Alu -32 280 1 2242 100 0 0 chr17 7458177 7458478 -77980002 - AluSq SINE Alu -8 305 5 992 136 0 30 chr17 7458495 7458510 -77979970 + AluSg/x SINE Alu 122 136 -180 2140 112 3 10 chr17 7458510 7458824 -77979656 + AluSx SINE Alu 1 312 0 992 136 0 30 chr17 7458824 7459008 -77979472 + AluSg/x SINE Alu 136 316 0 2002 107 40 0 chr17 7461036 7461334 -77977146 - AluSg SINE Alu 0 310 1 2001 114 3 29 chr17 7461339 7461647 -77976833 - AluSq SINE Alu -13 300 1 2309 88 3 0 chr17 7461652 7461959 -77976521 - AluY SINE Alu -3 308 1 2264 98 3 0 chr17 7462007 7462312 -77976168 + AluSq SINE Alu 1 306 -7 1405 174 10 30 chr17 7462312 7462616 -77975864 + AluJb SINE Alu 15 312 0 * 1410 179 0 39 chr17 7462615 7462716 -77975764 + AluJb SINE Alu 27 130 -182 1972 122 28 0 chr17 7462716 7463004 -77975476 + AluSx SINE Alu 1 296 -16 1995 123 19 10 chr17 7463005 7463313 -77975167 + AluSx SINE Alu 1 311 -1 1410 179 0 39 chr17 7463313 7463494 -77974986 + AluJb SINE Alu 129 300 -12 1587 191 3 7 chr17 7463496 7463789 -77974691 + AluJb SINE Alu 1 292 -20 2060 112 10 0 chr17 7463849 7464145 -77974335 - AluSp SINE Alu -14 299 1 2244 81 0 26 chr17 7464199 7464508 -77973972 - AluY SINE Alu -10 301 1 2287 90 0 0 chr17 7464683 7464982 -77973498 + AluSx SINE Alu 1 299 -13 2218 91 0 26 chr17 7465111 7465418 -77973062 + AluSx SINE Alu 1 299 -13 32 26 0 0 chr17 7465571 7465610 -77972870 + AT_rich Low_complexity Low_complexity 1 39 0 2235 93 0 19 chr17 7465631 7465941 -77972539 - AluSx SINE Alu -8 304 1 572 122 0 0 chr17 7465943 7466025 -77972455 - AluSq/x SINE Alu -176 136 55 370 191 44 0 chr17 7466049 7466117 -77972363 - tRNA-Ile-ATT tRNA tRNA -5 72 2 1647 148 3 66 chr17 7466132 7466327 -77972153 - AluJo SINE Alu -1 311 105 1942 156 0 0 chr17 7466327 7466629 -77971851 + AluSq SINE Alu 3 304 -9 2066 123 0 13 chr17 7466637 7466946 -77971534 + AluSx SINE Alu 3 307 -5 1647 148 3 66 chr17 7466946 7467073 -77971407 - AluJo SINE Alu -214 98 1 812 231 0 0 chr17 7467151 7467311 -77971169 - FRAM SINE Alu -16 160 1 243 182 0 0 chr17 7467322 7467366 -77971114 + Alu SINE Alu 211 254 -48 1547 246 110 35 chr17 7467464 7467522 -77970958 - HAL1 LINE L1 -260 2247 2195 2188 92 7 16 chr17 7467522 7467825 -77970655 - AluSq SINE Alu -8 305 6 1547 246 110 35 chr17 7467825 7467850 -77970630 - HAL1 LINE L1 -312 2195 2173 2260 98 3 0 chr17 7467850 7468147 -77970333 - AluSp SINE Alu -15 298 1 1547 246 110 35 chr17 7468147 7468649 -77969831 - HAL1 LINE L1 -334 2173 1609 1799 136 0 106 chr17 7468649 7468979 -77969501 + AluSx SINE Alu 1 295 -7 1547 246 110 35 chr17 7468979 7469020 -77969460 - HAL1 LINE L1 -898 1609 1572 2095 111 0 14 chr17 7469022 7469319 -77969161 - AluSx SINE Alu -19 293 1 831 170 0 0 chr17 7469319 7469454 -77969026 - AluJb SINE Alu -177 135 1 295 246 0 56 chr17 7469480 7469622 -77968858 - HAL1 LINE L1 -1214 1293 1160 2075 97 32 32 chr17 7469624 7469935 -77968545 - AluSx SINE Alu -1 311 1 35 0 0 0 chr17 7469943 7469978 -77968502 + AT_rich Low_complexity Low_complexity 1 35 0 2162 113 0 3 chr17 7470291 7470600 -77967880 - AluSg SINE Alu -2 308 1 2202 71 0 55 chr17 7470604 7470930 -77967550 - AluY SINE Alu -3 308 1 1602 121 16 52 chr17 7470931 7471236 -77967244 - AluSc SINE Alu -15 294 1 824 116 31 0 chr17 7471236 7471365 -77967115 - AluJb SINE Alu -176 136 4 2002 76 3 99 chr17 7471395 7471737 -77966743 - AluSx SINE Alu -3 309 1 200 208 19 19 chr17 7472364 7472417 -77966063 + (CGG)n Simple_repeat Simple_repeat 2 54 0 188 197 0 16 chr17 7472430 7472491 -77965989 + (CGG)n Simple_repeat Simple_repeat 2 61 0 27 49 0 0 chr17 7472518 7472559 -77965921 + GC_rich Low_complexity Low_complexity 1 41 0 26 50 0 0 chr17 7472577 7472617 -77965863 + GC_rich Low_complexity Low_complexity 1 40 0 2483 52 0 3 chr17 7474233 7474541 -77963939 - AluY SINE Alu -4 307 1 2130 124 0 0 chr17 7475559 7475866 -77962614 - AluSx SINE Alu -1 311 5 257 260 14 0 chr17 7475998 7476071 -77962409 - U13 snRNA snRNA -26 78 5 994 162 9 90 chr17 7477086 7477211 -77961269 - AluSx SINE Alu -87 225 124 1032 156 0 0 chr17 7477211 7477391 -77961089 + (TA)n Simple_repeat Simple_repeat 1 180 0 994 162 9 90 chr17 7477391 7477487 -77960993 - AluSx SINE Alu -188 124 22 1178 186 0 9 chr17 7478115 7478335 -77960145 - AluJb SINE Alu 0 312 95 542 232 27 21 chr17 7478349 7478527 -77959953 - L1MA10 LINE L1 0 6334 5998 1465 177 9 78 chr17 7478610 7478944 -77959536 - AluSx SINE Alu -1 311 1 244 148 93 0 chr17 7478945 7478999 -77959481 + L1M4 LINE L1 4889 4947 -1199 836 158 8 0 chr17 7479002 7479129 -77959351 + FLAM_C SINE Alu 2 129 -14 23 0 0 0 chr17 7479129 7479152 -77959328 + AT_rich Low_complexity Low_complexity 1 23 0 639 194 8 97 chr17 7479152 7479165 -77959315 + L1M4 LINE L1 4942 4955 -1191 2031 106 16 19 chr17 7479165 7479477 -77959003 + AluSp SINE Alu 1 311 -2 639 194 8 97 chr17 7479477 7479529 -77958951 + L1M4 LINE L1 4955 5010 -1136 2000 118 7 3 chr17 7479529 7479818 -77958662 + AluSx SINE Alu 1 290 -22 639 194 8 97 chr17 7479818 7479907 -77958573 + L1M4 LINE L1 5010 5070 -1076 2297 103 3 0 chr17 7479907 7480219 -77958261 - AluSq SINE Alu 0 313 1 639 194 8 97 chr17 7480219 7480310 -77958170 + L1M4 LINE L1 5070 5167 -979 2011 128 3 0 chr17 7481858 7482169 -77956311 - AluSx SINE Alu 0 312 1 2296 92 0 3 chr17 7482233 7482536 -77955944 + AluSq SINE Alu 1 302 -11 2006 120 17 0 chr17 7482551 7482842 -77955638 - AluSx SINE Alu -16 296 1 827 193 73 73 chr17 7482890 7483108 -77955372 - AluJo SINE Alu -94 218 1 2448 80 3 0 chr17 7483698 7484010 -77954470 - AluSp SINE Alu 0 313 1 846 170 0 15 chr17 7484056 7484191 -77954289 - FLAM_C SINE Alu 0 133 1 2267 74 0 42 chr17 7484507 7484675 -77953805 - AluSg SINE Alu -11 299 148 2249 78 0 14 chr17 7484675 7484971 -77953509 - AluSg SINE Alu -17 293 2 2267 74 0 42 chr17 7484971 7485114 -77953366 - AluSg SINE Alu -162 148 1 2190 105 0 0 chr17 7485315 7485609 -77952871 - AluSc SINE Alu -15 294 1 2144 110 3 0 chr17 7486057 7486358 -77952122 - AluSx SINE Alu -10 302 1 2008 132 0 0 chr17 7486364 7486652 -77951828 - AluSg SINE Alu -22 288 1 473 203 0 0 chr17 7486653 7486732 -77951748 - AluJ/FLAM SINE Alu -225 87 9 1749 116 53 32 chr17 7486767 7487051 -77951429 + AluSp SINE Alu 5 294 -19 2335 71 0 3 chr17 7487057 7487352 -77951128 + AluSq SINE Alu 1 294 -19 2046 125 13 3 chr17 7487357 7487661 -77950819 - AluSx SINE Alu -5 307 1 1735 177 3 25 chr17 7487925 7488104 -77950376 - AluSx SINE Alu -2 310 139 1751 146 38 0 chr17 7488104 7488392 -77950088 - AluSx SINE Alu -13 299 1 1735 177 3 25 chr17 7488392 7488529 -77949951 - AluSx SINE Alu -173 139 1 587 141 0 0 chr17 7488532 7488624 -77949856 - AluSg/x SINE Alu -4 305 214 418 297 195 31 chr17 7488624 7488771 -77949709 - L2 LINE L2 -430 2884 2762 2206 59 0 17 chr17 7488771 7489087 -77949393 - AluY SINE Alu 0 311 1 418 297 195 31 chr17 7489087 7489261 -77949219 - L2 LINE L2 -552 2762 2509 781 190 27 15 chr17 7489270 7489547 -77948933 + MER21B LTR ERV1 1 316 -547 604 110 26 3 chr17 7489547 7489777 -77948703 + AluSx SINE Alu 1 305 -4 2020 122 3 0 chr17 7490149 7490435 -77948045 - AluSc SINE Alu -22 287 1 207 252 89 98 chr17 7490604 7490727 -77947753 - MIR SINE MIR -64 144 23 2216 101 0 0 chr17 7490798 7491096 -77947384 + AluSx SINE Alu 1 298 -14 1284 148 110 76 chr17 7491510 7491800 -77946680 + AluJb SINE Alu 3 302 0 639 184 54 101 chr17 7491806 7491974 -77946506 + FRAM SINE Alu 2 161 -5 547 236 36 0 chr17 7491975 7492085 -77946395 - AluJo/FLAM SINE Alu -197 115 2 1574 148 3 96 chr17 7492111 7492455 -77946025 - AluSx SINE Alu 0 312 1 2252 72 24 0 chr17 7500801 7501091 -77937389 - AluSq SINE Alu -16 297 1 2115 124 0 3 chr17 7501703 7502001 -77936479 - AluSx SINE Alu -15 297 1 2382 71 0 3 chr17 7502237 7502545 -77935935 - AluSq SINE Alu -6 307 1 1839 77 26 89 chr17 7505301 7505614 -77932866 - AluSx SINE Alu -19 293 1 202 203 25 25 chr17 7507240 7507319 -77931161 + (TGG)n Simple_repeat Simple_repeat 1 79 0 1752 160 38 3 chr17 7510073 7510366 -77928114 - AluJo SINE Alu -9 303 1 798 247 34 38 chr17 7510412 7510472 -77928008 + L1M4 LINE L1 3554 3613 -2533 2051 129 23 3 chr17 7510472 7510774 -77927706 + AluSx SINE Alu 1 308 -4 798 247 34 38 chr17 7510774 7510946 -77927534 + L1M4 LINE L1 3613 3787 -2359 2325 109 0 13 chr17 7510946 7511082 -77927398 + AluSx SINE Alu 1 137 -175 2351 83 14 0 chr17 7511082 7511372 -77927108 + AluSg SINE Alu 1 294 -16 2325 109 0 13 chr17 7511372 7511547 -77926933 + AluSx SINE Alu 137 308 -4 798 247 34 38 chr17 7511547 7511605 -77926875 + L1M4 LINE L1 3787 3844 -2302 705 162 8 0 chr17 7511607 7511724 -77926756 + FLAM_C SINE Alu 2 119 -24 919 229 56 102 chr17 7511733 7511961 -77926519 + L1M4 LINE L1 3839 4076 -2070 2431 73 6 19 chr17 7511961 7512275 -77926205 + AluY SINE Alu 2 311 0 919 229 56 102 chr17 7512275 7512382 -77926098 + L1M4 LINE L1 4076 4186 -1960 2583 59 3 0 chr17 7512382 7512688 -77925792 + AluY SINE Alu 1 307 -4 1997 127 0 46 chr17 7512696 7512838 -77925642 + AluSq SINE Alu 6 153 -160 2436 78 3 3 chr17 7512838 7513134 -77925346 + AluSq SINE Alu 1 296 -17 1997 127 0 46 chr17 7513134 7513314 -77925166 + AluSq SINE Alu 153 313 0 919 229 56 102 chr17 7513314 7513388 -77925092 + L1M4 LINE L1 4193 4269 -1877 1787 106 64 8 chr17 7513388 7513651 -77924829 + AluSq SINE Alu 1 278 -35 2156 106 19 44 chr17 7513651 7513971 -77924509 + AluSx SINE Alu 1 312 0 919 229 56 102 chr17 7513652 7514048 -77924432 + L1M4 LINE L1 4269 4313 -1833 806 168 59 77 chr17 7514048 7514268 -77924212 + MER2 DNA MER2_type 2 217 -128 228 241 35 0 chr17 7514762 7514820 -77923660 - MIR SINE MIR -3 259 200 1992 128 14 3 chr17 7514847 7515179 -77923301 + AluSq SINE Alu 1 313 0 2443 80 13 0 chr17 7515243 7515544 -77922936 + AluSp SINE Alu 1 305 -8 1051 165 46 21 chr17 7515654 7515706 -77922774 + AluJo SINE Alu 85 134 -174 2258 117 0 16 chr17 7515706 7516023 -77922457 + AluSx SINE Alu 1 312 0 1051 165 46 21 chr17 7516023 7516189 -77922291 + AluJo SINE Alu 134 308 0 2165 125 6 0 chr17 7516196 7516507 -77921973 + AluSq SINE Alu 1 313 0 360 242 96 45 chr17 7516652 7516850 -77921630 - L2 LINE L2 -17 3296 3089 2216 118 3 0 chr17 7517221 7517517 -77920963 + AluSx SINE Alu 1 297 -15 199 268 134 45 chr17 7517518 7517697 -77920783 - L2 LINE L2 -1810 1504 1310 2024 143 0 16 chr17 7518740 7519047 -77919433 + AluJb SINE Alu 1 302 -10 184 283 33 54 chr17 7519669 7519761 -77918719 - MIR SINE MIR -70 192 103 2441 60 7 13 chr17 7519775 7520074 -77918406 + AluY SINE Alu 1 297 -14 729 108 15 54 chr17 7521164 7521294 -77917186 - MER47A DNA MER2_type 0 366 242 2252 95 0 47 chr17 7521294 7521611 -77916869 - AluSg SINE Alu -8 302 1 1204 179 28 14 chr17 7521623 7521841 -77916639 - AluJo SINE Alu -11 301 81 928 163 0 25 chr17 7521849 7522009 -77916471 - AluJb SINE Alu -24 288 133 236 53 26 0 chr17 7522009 7522047 -77916433 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 2145 85 7 11 chr17 7522047 7522330 -77916150 - AluSg SINE Alu -28 282 1 1631 192 31 3 chr17 7522332 7522624 -77915856 - AluJo SINE Alu -12 300 1 884 136 0 26 chr17 7522624 7522779 -77915701 - MER47A DNA MER2_type -116 250 100 2327 84 14 0 chr17 7522841 7523138 -77915342 + AluSx SINE Alu 1 301 -11 693 176 0 24 chr17 7523141 7523266 -77915214 + FLAM_A SINE Alu 5 126 -7 1717 161 28 3 chr17 7523267 7523558 -77914922 + AluSx SINE Alu 1 298 -14 441 245 0 19 chr17 7523573 7523679 -77914801 - MER47A DNA MER2_type -259 107 4 2260 83 23 13 chr17 7524236 7524538 -77913942 + AluSp SINE Alu 1 305 -8 242 320 58 10 chr17 7525192 7525295 -77913185 + MIR SINE MIR 110 217 -45 1936 153 10 0 chr17 7525587 7525887 -77912593 - AluJb SINE Alu -2 310 8 507 133 88 0 chr17 7526548 7526661 -77911819 - AluSq/x SINE Alu -190 123 1 708 326 96 16 chr17 7526667 7527041 -77911439 - L2 LINE L2 -18 3295 2892 2124 125 7 3 chr17 7527041 7527344 -77911136 + AluSx SINE Alu 1 304 -8 255 321 104 25 chr17 7527356 7527448 -77911032 + L2 LINE L2 1826 1909 -1405 2375 54 44 7 chr17 7527448 7527742 -77910738 - AluY SINE Alu -6 305 1 255 321 104 25 chr17 7527742 7527889 -77910591 + L2 LINE L2 1909 2084 -1230 286 286 0 0 chr17 7527960 7528023 -77910457 - L2 LINE L2 -2069 1245 1183 501 221 21 97 chr17 7528043 7528138 -77910342 + MIR SINE MIR 122 204 -58 2315 107 7 3 chr17 7528138 7528446 -77910034 + AluSx SINE Alu 1 309 -3 501 221 21 97 chr17 7528446 7528495 -77909985 + MIR SINE MIR 204 255 -7 196 288 25 25 chr17 7528558 7528638 -77909842 - L2 LINE L2 -2227 1087 1008 1160 80 7 20 chr17 7528702 7528852 -77909628 + AluSq/x SINE Alu 1 148 -165 27 49 0 0 chr17 7528862 7528903 -77909577 + AT_rich Low_complexity Low_complexity 1 41 0 2166 121 13 19 chr17 7528927 7529241 -77909239 - AluSx SINE Alu 0 312 1 907 193 73 73 chr17 7529289 7529507 -77908973 - AluJo SINE Alu -94 218 1 2592 80 3 0 chr17 7530097 7530409 -77908071 - AluSp SINE Alu 0 313 1 796 170 0 15 chr17 7530455 7530590 -77907890 - FLAM_C SINE Alu 0 133 1 2412 74 0 42 chr17 7530906 7531074 -77907406 - AluSg SINE Alu -11 299 148 2399 74 0 14 chr17 7531074 7531370 -77907110 - AluSg SINE Alu -17 293 2 2412 74 0 42 chr17 7531370 7531513 -77906967 - AluSg SINE Alu -162 148 1 2173 128 3 3 chr17 7531714 7532011 -77906469 - AluSx SINE Alu -15 297 1 1855 177 3 25 chr17 7532275 7532454 -77906026 - AluSx SINE Alu -2 310 139 1857 146 38 0 chr17 7532454 7532741 -77905739 - AluSx SINE Alu -14 298 1 1855 177 3 25 chr17 7532741 7532878 -77905602 - AluSx SINE Alu -173 139 1 550 141 0 0 chr17 7532881 7532973 -77905507 - AluSg/x SINE Alu -4 305 214 399 288 198 34 chr17 7532973 7533120 -77905360 - L2 LINE L2 -430 2884 2762 2347 59 0 17 chr17 7533120 7533436 -77905044 - AluY SINE Alu 0 311 1 399 288 198 34 chr17 7533436 7533610 -77904870 - L2 LINE L2 -552 2762 2509 772 190 27 15 chr17 7533619 7533896 -77904584 + MER21B LTR ERV1 1 316 -547 566 110 26 3 chr17 7533896 7534126 -77904354 + AluSx SINE Alu 1 305 -4 2148 122 3 0 chr17 7534498 7534784 -77903696 - AluSc SINE Alu -22 287 1 203 252 89 98 chr17 7534953 7535076 -77903404 - MIR SINE MIR -64 144 23 2348 101 0 0 chr17 7535147 7535445 -77903035 + AluSx SINE Alu 1 298 -14 1298 159 110 69 chr17 7535859 7536149 -77902331 + AluJo SINE Alu 3 304 -8 680 163 52 99 chr17 7536151 7536323 -77902157 + AluJb SINE Alu 134 297 -15 507 236 36 0 chr17 7536324 7536434 -77902046 - AluJo/FLAM SINE Alu -197 115 2 1680 151 3 96 chr17 7536460 7536804 -77901676 - AluSx SINE Alu 0 312 1 1949 134 7 0 chr17 7537466 7537750 -77900730 - AluSx SINE Alu -26 286 1 1626 160 93 0 chr17 7537782 7538051 -77900429 + AluJo SINE Alu 6 299 -13 2467 54 0 10 chr17 7538166 7538461 -77900019 - AluY SINE Alu -19 292 1 274 315 35 54 chr17 7538909 7539112 -77899368 + L2 LINE L2 2431 2629 -685 324 293 32 75 chr17 7539265 7539453 -77899027 - L2 LINE L2 -189 3083 2904 2664 52 0 0 chr17 7539497 7539804 -77898676 - AluY SINE Alu -4 307 1 372 298 113 36 chr17 7539890 7540138 -77898342 - L2 LINE L2 -785 2529 2263 344 272 28 51 chr17 7540219 7540245 -77898235 + L1ME3A LINE L1 5278 5303 -2505 2453 97 3 0 chr17 7540245 7540556 -77897924 + AluSx SINE Alu 1 312 0 344 272 28 51 chr17 7540556 7540584 -77897896 + L1ME3A LINE L1 5303 5330 -2478 2181 134 7 3 chr17 7540584 7540891 -77897589 + AluSx SINE Alu 1 308 -4 344 272 28 51 chr17 7540891 7541052 -77897428 + L1ME3A LINE L1 5330 5489 -2319 1307 180 9 0 chr17 7541077 7541288 -77897192 - AluJo SINE Alu -15 297 85 419 324 99 17 chr17 7541288 7541581 -77896899 + L1ME3A LINE L1 5517 5833 -337 1549 163 19 70 chr17 7541656 7541802 -77896678 + AluJo SINE Alu 1 153 -159 2173 93 4 7 chr17 7541802 7542080 -77896400 + AluSg1 SINE Alu 1 277 -32 306 0 0 0 chr17 7542082 7542116 -77896364 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 1549 163 19 70 chr17 7542116 7542279 -77896201 + AluJo SINE Alu 154 297 -15 2014 132 4 4 chr17 7542344 7542625 -77895855 + AluSx SINE Alu 1 281 -31 1991 124 3 26 chr17 7542974 7543280 -77895200 + AluSq SINE Alu 1 299 -14 2098 144 0 3 chr17 7543326 7543631 -77894849 + AluSx SINE Alu 1 304 -8 2359 88 0 26 chr17 7543639 7543946 -77894534 + AluSx SINE Alu 1 299 -13 32 26 0 0 chr17 7544099 7544138 -77894342 + AT_rich Low_complexity Low_complexity 1 39 0 2277 110 0 16 chr17 7544159 7544467 -77894013 - AluSx SINE Alu -9 303 1 532 122 0 0 chr17 7544469 7544551 -77893929 - AluSq/x SINE Alu -177 136 55 363 191 44 0 chr17 7544575 7544643 -77893837 - tRNA-Ile-ATT tRNA tRNA -5 72 2 1747 149 3 67 chr17 7544658 7544850 -77893630 - AluJo SINE Alu -4 308 105 2070 156 0 0 chr17 7544850 7545152 -77893328 + AluSq SINE Alu 3 304 -9 2197 123 0 13 chr17 7545160 7545469 -77893011 + AluSx SINE Alu 3 307 -5 1747 149 3 67 chr17 7545469 7545596 -77892884 - AluJo SINE Alu -214 98 1 207 209 0 0 chr17 7545616 7545659 -77892821 + T-rich Low_complexity Low_complexity 1 43 0 873 228 0 0 chr17 7545677 7545835 -77892645 - FRAM SINE Alu -18 158 1 238 182 0 0 chr17 7545846 7545890 -77892590 + Alu SINE Alu 211 254 -48 234 264 0 0 chr17 7545899 7545952 -77892528 - HAL1 LINE L1 -213 2294 2242 2324 92 7 16 chr17 7546046 7546349 -77892131 - AluSq SINE Alu -8 305 6 2420 91 3 0 chr17 7546374 7546671 -77891809 - AluSp SINE Alu -15 298 1 883 170 0 0 chr17 7546671 7546806 -77891674 - AluJb SINE Alu -177 135 1 335 228 0 102 chr17 7546807 7546974 -77891506 - HAL1 LINE L1 -1198 1309 1160 2217 97 32 32 chr17 7546976 7547287 -77891193 - AluSx SINE Alu -1 311 1 35 0 0 0 chr17 7547295 7547330 -77891150 + AT_rich Low_complexity Low_complexity 1 35 0 2300 94 0 3 chr17 7547665 7547952 -77890528 - AluSg SINE Alu -24 286 1 2367 71 0 43 chr17 7547956 7548278 -77890202 - AluY SINE Alu -3 308 1 1721 115 20 56 chr17 7548279 7548584 -77889896 - AluSc SINE Alu -15 294 1 713 119 56 0 chr17 7548584 7548710 -77889770 - AluJb SINE Alu -176 136 4 205 231 11 22 chr17 7548839 7548930 -77889550 + G-rich Low_complexity Low_complexity 5 94 0 405 174 0 0 chr17 7549504 7549573 -77888907 - AluS SINE Alu -239 70 2 207 191 44 0 chr17 7549666 7549734 -77888746 + (TA)n Simple_repeat Simple_repeat 2 72 0 328 300 94 65 chr17 7549744 7549904 -77888576 + L1M4 LINE L1 4225 4379 -1767 2147 144 7 0 chr17 7549904 7550210 -77888270 + AluSx SINE Alu 1 308 -4 328 300 94 65 chr17 7550210 7550436 -77888044 + L1M4 LINE L1 4379 4622 -1524 2159 100 4 4 chr17 7550520 7550799 -77887681 + AluSc SINE Alu 1 279 -30 1836 108 8 4 chr17 7550812 7551071 -77887409 + AluSx SINE Alu 44 303 -9 2117 129 0 3 chr17 7551078 7551373 -77887107 + AluSx SINE Alu 1 294 -18 1448 137 15 0 chr17 7551929 7552133 -77886347 - AluSx SINE Alu -105 207 1 948 49 21 0 chr17 7552137 7552280 -77886200 + (TCTA)n Simple_repeat Simple_repeat 1 146 0 413 190 60 0 chr17 7552280 7552380 -77886100 - FLAM_C SINE Alu -27 116 11 2194 116 0 3 chr17 7552382 7552676 -77885804 - AluSx SINE Alu -19 293 1 1427 239 106 20 chr17 7552676 7553178 -77885302 + HAL1 LINE L1 1600 2144 -363 477 139 0 13 chr17 7553180 7553259 -77885221 + AluS SINE Alu 2 79 -233 480 179 0 0 chr17 7553547 7553631 -77884849 + AluJ/FRAM SINE Alu 216 299 -13 1200 193 10 0 chr17 7553746 7553953 -77884527 - AluJo SINE Alu -19 293 85 212 286 236 11 chr17 7555392 7555574 -77882906 + L2 LINE L2 2492 2714 -600 1285 117 0 48 chr17 7555579 7555767 -77882713 + AluSc SINE Alu 1 179 -130 332 198 77 11 chr17 7755829 7755920 -77682560 - U6 snRNA snRNA -9 98 2 369 330 131 44 chr17 7755961 7756486 -77681994 + L2 LINE L2 2524 3182 -90 2239 119 0 13 chr17 7756486 7756796 -77681684 - AluSc SINE Alu -3 306 1 369 330 131 44 chr17 7756796 7756872 -77681608 + L2 LINE L2 3182 3250 -22 595 229 150 9 chr17 7757090 7757101 -77681379 + L1MB2 LINE L1 5892 5900 -271 1927 170 0 0 chr17 7757101 7757407 -77681073 + AluJb SINE Alu 1 306 -6 595 229 150 9 chr17 7757407 7757622 -77680858 + L1MB2 LINE L1 5900 6150 -21 2230 98 0 7 chr17 7757631 7757918 -77680562 - AluY SINE Alu -26 285 1 861 157 0 0 chr17 7758263 7758384 -77680096 - FLAM_C SINE Alu -22 121 1 702 253 54 5 chr17 7758575 7758761 -77679719 + MIR SINE MIR 67 261 -1 2130 126 7 0 chr17 7759019 7759312 -77679168 - AluSx SINE Alu -17 295 1 229 281 62 42 chr17 7759802 7759898 -77678582 - MIR SINE MIR -6 256 159 800 277 210 12 chr17 7760118 7760699 -77677781 + L2 LINE L2 1889 2584 -730 214 210 0 32 chr17 7761902 7761964 -77676516 + C-rich Low_complexity Low_complexity 6 65 0 22 56 0 0 chr17 7762069 7762105 -77676375 + AT_rich Low_complexity Low_complexity 1 36 0 2228 124 0 0 chr17 7762240 7762539 -77675941 + AluJb SINE Alu 13 311 -1 745 177 0 8 chr17 7762802 7762932 -77675548 + FLAM_A SINE Alu 13 141 -1 2305 85 3 0 chr17 7762952 7763255 -77675225 - AluSp SINE Alu 0 304 1 241 259 50 29 chr17 7763911 7764050 -77674430 + HAL1b LINE L1 152 293 -1055 328 270 0 11 chr17 7764096 7764185 -77674295 + L1MC4 LINE L1 7444 7531 -511 498 77 15 0 chr17 7764300 7764365 -77674115 - AluS SINE Alu -246 67 2 1647 194 41 6 chr17 7764366 7764711 -77673769 + MER21B LTR ERV1 447 803 -60 2070 99 59 6 chr17 7764717 7764784 -77673696 - MER2 DNA MER2_type 0 345 283 2319 74 0 42 chr17 7764784 7765096 -77673384 + AluSx SINE Alu 3 301 -11 2070 99 59 6 chr17 7765096 7765351 -77673129 - MER2 DNA MER2_type -62 283 6 225 184 0 0 chr17 7765354 7765392 -77673088 + MER21B LTR ERV1 815 852 -11 211 341 0 31 chr17 7765910 7766039 -77672441 + G-rich Low_complexity Low_complexity 4 128 0 619 303 101 0 chr17 7766332 7766550 -77671930 + MIR SINE MIR 3 242 -20 1972 163 0 0 chr17 7766582 7766888 -77671592 + AluJb SINE Alu 1 306 -6 2551 79 0 0 chr17 7767102 7767406 -77671074 - AluSq SINE Alu -4 309 6 337 272 97 61 chr17 7768104 7768218 -77670262 - MIR SINE MIR -122 140 23 1861 125 96 0 chr17 7768295 7768575 -77669905 - AluJo SINE Alu 0 312 6 1107 80 12 19 chr17 7768589 7768751 -77669729 - L1PA13 LINE L1 0 6163 6003 2045 114 4 4 chr17 7768820 7769100 -77669380 + AluSx SINE Alu 1 280 -32 2274 105 0 38 chr17 7769501 7769815 -77668665 + AluSx SINE Alu 1 302 -10 526 160 0 75 chr17 7771605 7771711 -77666769 + FLAM_A SINE Alu 1 98 -44 2082 93 0 25 chr17 7771879 7772159 -77666321 - AluSx SINE Alu -39 273 1 22 0 0 0 chr17 7772159 7772181 -77666299 + AT_rich Low_complexity Low_complexity 1 22 0 876 187 0 13 chr17 7772473 7772646 -77665834 - AluSg/x SINE Alu 0 304 134 2388 104 0 3 chr17 7772972 7773279 -77665201 - AluSx SINE Alu -6 306 1 524 218 88 41 chr17 7773417 7773564 -77664916 + MIR SINE MIR 20 173 -89 2091 119 25 0 chr17 7773850 7774136 -77664344 + AluSx SINE Alu 6 298 -14 1149 145 36 54 chr17 7775017 7775238 -77663242 - AluJo SINE Alu -5 307 91 2085 103 65 14 chr17 7775253 7775544 -77662936 - AluSx SINE Alu -6 306 1 487 229 109 18 chr17 7775740 7775920 -77662560 + MIR SINE MIR 17 212 -50 346 288 45 51 chr17 7776003 7776087 -77662393 - L2 LINE L2 -177 3095 3012 2487 75 3 0 chr17 7776087 7776393 -77662087 - AluY SINE Alu -4 307 1 346 288 45 51 chr17 7776393 7776485 -77661995 - L2 LINE L2 -260 3012 2920 467 273 12 62 chr17 7776559 7776720 -77661760 - MIR SINE MIR -62 200 48 2283 85 0 42 chr17 7776739 7776910 -77661570 - AluSg SINE Alu -16 294 117 180 0 0 0 chr17 7776910 7776930 -77661550 + (TTTA)n Simple_repeat Simple_repeat 3 22 0 2226 69 44 0 chr17 7776931 7777205 -77661275 - AluY SINE Alu -25 286 1 2283 85 0 42 chr17 7777205 7777338 -77661142 - AluSg SINE Alu -192 118 1 2029 159 0 3 chr17 7778213 7778521 -77659959 - AluSx SINE Alu -5 307 1 189 0 0 0 chr17 7778542 7778563 -77659917 + (T)n Simple_repeat Simple_repeat 1 21 0 1115 106 0 4 chr17 7778600 7778817 -77659663 - AluJb SINE Alu -10 302 2 2264 101 10 0 chr17 7779378 7779675 -77658805 + AluSx SINE Alu 1 300 -12 2181 83 0 0 chr17 7779933 7780199 -77658281 - AluSx SINE Alu -46 266 1 336 298 48 36 chr17 7780199 7780367 -77658113 - L1MC4a LINE L1 -1916 5892 5723 23 0 0 0 chr17 7780413 7780436 -77658044 + AT_rich Low_complexity Low_complexity 1 23 0 379 290 142 12 chr17 7780445 7780614 -77657866 - MIR3 SINE MIR -4 204 14 556 165 119 0 chr17 7781165 7781274 -77657206 - FLAM_C SINE Alu -17 126 5 277 121 0 35 chr17 7781283 7781341 -77657139 + (TTCC)n Simple_repeat Simple_repeat 3 58 0 2189 134 0 3 chr17 7781341 7781654 -77656826 - AluJb SINE Alu 0 312 1 2203 109 0 0 chr17 7781666 7781978 -77656502 - AluSx SINE Alu 0 312 1 268 267 67 0 chr17 7782018 7782093 -77656387 + MER5B DNA MER1_type 61 140 -38 1704 208 58 3 chr17 7782767 7783113 -77655367 - MLT1A1 LTR MaLR 0 365 1 782 293 150 49 chr17 7783363 7783851 -77654629 + L1M4 LINE L1 4519 5055 -1091 29 0 0 0 chr17 7783851 7783880 -77654600 + AT_rich Low_complexity Low_complexity 1 29 0 595 155 0 2 chr17 7783883 7784147 -77654333 + AluSx SINE Alu 1 312 0 252 221 15 0 chr17 7784584 7784652 -77653828 + HAL1 LINE L1 840 908 -1599 824 197 152 26 chr17 7784666 7784975 -77653505 + HAL1 LINE L1 1581 1928 -579 529 133 13 0 chr17 7785081 7785156 -77653324 + AluS SINE Alu 2 77 -235 2311 92 0 7 chr17 7785254 7785549 -77652931 - AluSg SINE Alu -17 293 1 420 284 49 11 chr17 7785550 7785733 -77652747 + HAL1 LINE L1 2029 2218 -289 2540 81 3 0 chr17 7785916 7786226 -77652254 - AluSp SINE Alu -2 311 1 1907 158 3 3 chr17 7786457 7786760 -77651720 + AluJb SINE Alu 1 303 -9 352 242 25 50 chr17 7787822 7787983 -77650497 + L1MC4a LINE L1 5734 5890 -1918 709 112 103 26 chr17 7787988 7788104 -77650376 + FLAM_C SINE Alu 5 129 -4 1562 136 17 4 chr17 7788223 7788458 -77650022 - AluJb SINE Alu -74 238 1 347 160 140 0 chr17 7788461 7788561 -77649919 - Charlie5 DNA MER1_type -76 2536 2423 1952 134 35 0 chr17 7788573 7788856 -77649624 - AluSx SINE Alu -19 293 1 2306 141 19 8 chr17 7789551 7789912 -77648568 - MLT1A1 LTR MaLR 0 365 1 865 211 30 20 chr17 7789978 7790140 -77648340 - MER3 DNA MER1_type 0 209 43 406 101 159 0 chr17 7790140 7790209 -77648271 + MADE1 DNA Mariner 1 80 0 865 211 30 20 chr17 7790209 7790245 -77648235 - MER3 DNA MER1_type -166 43 9 332 281 88 77 chr17 7791846 7791904 -77646576 - L1M4 LINE L1 -1670 4476 4420 387 41 0 0 chr17 7791904 7791953 -77646527 + (CA)n Simple_repeat Simple_repeat 2 50 0 332 281 88 77 chr17 7791953 7792154 -77646326 - L1M4 LINE L1 -1726 4420 4214 2646 40 0 0 chr17 7792186 7792482 -77645998 + AluY SINE Alu 1 296 -15 756 194 35 6 chr17 7792617 7792787 -77645693 + Charlie8 DNA MER1_type 75 249 -2168 582 297 110 78 chr17 7792898 7793424 -77645056 - L2 LINE L2 -818 2496 1929 2337 103 0 0 chr17 7793424 7793726 -77644754 + AluSx SINE Alu 2 303 -9 582 297 110 78 chr17 7793726 7794070 -77644410 - L2 LINE L2 -1385 1929 1598 475 326 91 50 chr17 7794748 7795186 -77643294 - L2 LINE L2 -1756 1558 1103 2593 59 0 7 chr17 7796086 7796393 -77642087 - AluY SINE Alu -6 305 1 1661 103 0 4 chr17 7796436 7796678 -77641802 - Tigger5 DNA MER2_type -31 2292 2052 271 136 0 0 chr17 7796674 7796718 -77641762 - Tigger5 DNA MER2_type -2265 58 15 * 27 49 0 0 chr17 7796763 7796804 -77641676 + AT_rich Low_complexity Low_complexity 1 41 0 2045 138 3 10 chr17 7796899 7797199 -77641281 - AluJb SINE Alu -16 296 1 203 360 140 18 chr17 7797232 7797346 -77641134 + L2 LINE L2 3181 3308 -5 2357 81 0 0 chr17 7797908 7798205 -77640275 - AluSx SINE Alu -15 297 1 418 329 24 44 chr17 7798569 7798821 -77639659 + L2 LINE L2 2511 2757 -557 879 152 0 0 chr17 7798944 7799076 -77639404 - FLAM_C SINE Alu -1 132 1 2124 107 3 0 chr17 7799088 7799378 -77639102 - AluSx SINE Alu -19 293 3 1813 115 4 4 chr17 7799481 7799741 -77638739 - AluSq SINE Alu -53 260 1 1833 146 28 0 chr17 7800098 7800385 -77638095 - AluJb SINE Alu -17 295 1 1539 177 89 0 chr17 7800568 7800735 -77637745 - AluJb SINE Alu -5 307 156 189 0 0 0 chr17 7800735 7800756 -77637724 + (TTG)n Simple_repeat Simple_repeat 1 21 0 1539 177 89 0 chr17 7800756 7800870 -77637610 - AluJb SINE Alu -156 156 1 2223 85 13 3 chr17 7800929 7801234 -77637246 - AluSq SINE Alu -5 308 1 332 313 55 0 chr17 7801246 7801485 -77636995 - L1ME3A LINE L1 -295 5875 5677 1048 26 45 7 chr17 7803297 7803451 -77635029 + (TTTC)n Simple_repeat Simple_repeat 1 160 0 812 155 14 7 chr17 7803485 7803627 -77634853 - AluJo SINE Alu -169 143 1 421 220 10 10 chr17 7804509 7804609 -77633871 + MER96B DNA MER1_type? 1 100 -317 1837 135 0 0 chr17 7804612 7804879 -77633601 - AluSx SINE Alu -6 306 40 806 189 22 22 chr17 7805032 7805254 -77633226 - MER96B DNA MER1_type? -97 320 99 1674 154 0 4 chr17 7805254 7805513 -77632967 + AluJb SINE Alu 1 258 -54 313 70 35 0 chr17 7805514 7805571 -77632909 + (TA)n Simple_repeat Simple_repeat 2 60 0 1573 107 9 5 chr17 7805578 7805802 -77632678 + AluSp SINE Alu 1 225 -88 1150 148 0 0 chr17 7807262 7807438 -77631042 - AluSg/x SINE Alu 0 312 137 2327 90 0 0 chr17 7807438 7807739 -77630741 - AluSx SINE Alu -11 301 1 2132 108 3 10 chr17 7808260 7808566 -77629914 - AluSx SINE Alu -8 304 1 662 169 54 0 chr17 7808576 7808724 -77629756 - L1MB7 LINE L1 0 6184 6029 1566 220 72 2 chr17 7808799 7809199 -77629281 - L1MB5 LINE L1 -154 6020 5593 2455 74 0 3 chr17 7809218 7809530 -77628950 - AluY SINE Alu 0 311 1 2223 106 3 0 chr17 7809530 7809831 -77628649 - AluSx SINE Alu -9 303 1 1289 100 0 0 chr17 7810571 7810741 -77627739 - AluSx SINE Alu -142 170 1 390 271 23 97 chr17 7810742 7810801 -77627679 - L1MB5 LINE L1 -749 5397 5335 2049 96 0 59 chr17 7810801 7811104 -77627376 - AluSg SINE Alu -25 285 1 390 271 23 97 chr17 7811104 7811245 -77627235 - L1MB5 LINE L1 -811 5335 5244 2123 109 0 0 chr17 7811350 7811661 -77626819 - AluSx SINE Alu 0 311 1 2230 99 3 0 chr17 7811663 7811957 -77626523 - AluSx SINE Alu -17 295 1 225 0 0 0 chr17 7812257 7812282 -77626198 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 369 363 73 26 chr17 7812750 7812826 -77625654 - L2 LINE L2 -22 3250 3179 2363 81 0 13 chr17 7812826 7813136 -77625344 + AluSc SINE Alu 1 306 -3 369 363 73 26 chr17 7813136 7813362 -77625118 - L2 LINE L2 -93 3179 2934 683 189 0 0 chr17 7813522 7813633 -77624847 - FLAM_C SINE Alu -32 111 1 198 0 0 0 chr17 7813654 7813676 -77624804 + (T)n Simple_repeat Simple_repeat 1 22 0 1105 101 0 4 chr17 7813712 7813930 -77624550 - AluJb SINE Alu -10 302 1 2382 87 0 3 chr17 7814638 7814948 -77623532 - AluSc SINE Alu 0 309 1 3359 172 33 57 chr17 7815471 7815512 -77622968 - L1MB5 LINE L1 0 6174 6134 2196 113 0 7 chr17 7815512 7815821 -77622659 - AluSx SINE Alu -5 307 1 3359 172 33 57 chr17 7815821 7816600 -77621880 - L1MB5 LINE L1 -40 6134 5374 3486 149 35 20 chr17 7817291 7817893 -77620587 - L1MA8 LINE L1 -1 6290 5680 2032 133 0 13 chr17 7818025 7818333 -77620147 - AluSx SINE Alu -8 304 1 509 317 70 10 chr17 7818340 7818539 -77619941 - L1MB5 LINE L1 -964 5182 4972 23 33 0 0 chr17 7818570 7818600 -77619880 + AT_rich Low_complexity Low_complexity 1 30 0 484 211 16 32 chr17 7818739 7818862 -77619618 + MIR SINE MIR 100 220 -42 820 247 60 40 chr17 7820477 7820737 -77617743 + MIR SINE MIR 2 261 -1 240 263 47 23 chr17 7821000 7821171 -77617309 + (CAGAGA)n Simple_repeat Simple_repeat 1 175 0 468 77 0 0 chr17 7826346 7826411 -77612069 + (CCA)n Simple_repeat Simple_repeat 2 66 0 219 69 0 0 chr17 7826901 7826930 -77611550 + (CAG)n Simple_repeat Simple_repeat 1 29 0 1335 82 0 0 chr17 7827350 7827521 -77610959 + AluSq SINE Alu 136 306 -7 671 267 108 0 chr17 7827538 7827714 -77610766 - MER91A DNA MER1_type 0 196 2 187 360 58 12 chr17 7829349 7829435 -77609045 + MIR SINE MIR 21 110 -152 2194 97 3 7 chr17 7829697 7829996 -77608484 + AluSq SINE Alu 1 298 -15 234 241 0 60 chr17 7831606 7831689 -77606791 + G-rich Low_complexity Low_complexity 3 80 0 201 39 0 0 chr17 7832102 7832128 -77606352 + (CGGGG)n Simple_repeat Simple_repeat 3 28 0 2404 94 0 0 chr17 7834069 7834377 -77604103 + AluSp SINE Alu 1 308 -5 2324 105 0 0 chr17 7834473 7834779 -77603701 + AluSx SINE Alu 1 306 -6 415 232 71 0 chr17 7835104 7835216 -77603264 - L2 LINE L2 -1 3312 3193 2363 93 0 3 chr17 7835787 7836097 -77602383 - AluSg SINE Alu -1 309 1 2260 94 3 22 chr17 7837432 7837750 -77600730 - AluSx SINE Alu 0 312 1 1936 139 36 3 chr17 7837757 7838059 -77600421 - AluJb SINE Alu 0 312 1 1147 143 94 25 chr17 7837974 7838069 -77600411 - AluJo SINE Alu -92 220 133 2458 86 0 0 chr17 7838069 7838373 -77600107 - AluSx SINE Alu -8 304 1 1147 143 94 25 chr17 7838373 7838493 -77599987 - AluJo SINE Alu -179 133 3 2375 109 0 0 chr17 7839020 7839323 -77599157 + AluSq SINE Alu 1 303 -10 2434 76 0 19 chr17 7840632 7840949 -77597531 - AluY SINE Alu 0 311 1 2524 79 0 0 chr17 7841444 7841748 -77596732 + AluSx SINE Alu 1 304 -8 762 292 29 0 chr17 7842440 7842649 -77595831 + MIR SINE MIR 28 242 -20 740 183 0 7 chr17 7843523 7843676 -77594804 + CT-rich Low_complexity Low_complexity 1 152 0 2472 70 0 3 chr17 7843676 7843975 -77594505 - AluY SINE Alu -13 298 1 1817 90 9 0 chr17 7843975 7844207 -77594273 - AluSp SINE Alu -6 307 74 2197 132 0 3 chr17 7844396 7844699 -77593781 + AluSx SINE Alu 1 302 -10 2123 124 7 0 chr17 7845632 7845930 -77592550 + AluJb SINE Alu 1 300 -12 317 231 74 9 chr17 7846121 7846229 -77592251 - L2 LINE L2 0 3313 3199 1846 77 0 0 chr17 7846346 7846567 -77591913 + AluSg/x SINE Alu 87 307 -5 391 103 0 0 chr17 7847241 7847299 -77591181 - Alu SINE Alu 0 301 244 2272 82 41 0 chr17 7847640 7847933 -77590547 + AluSg SINE Alu 1 305 -5 350 249 259 16 chr17 7848112 7848208 -77590272 + L1ME LINE L1 4373 4444 -1702 858 245 58 37 chr17 7848208 7848502 -77589978 + AluJo SINE Alu 1 300 -2 350 249 259 16 chr17 7848502 7848722 -77589758 + L1ME LINE L1 4444 4766 -1380 1376 189 66 4 chr17 7848738 7848997 -77589483 + AluJb SINE Alu 6 280 -32 216 0 0 0 chr17 7848998 7849022 -77589458 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 1037 244 88 31 chr17 7849029 7849206 -77589274 + L1ME LINE L1 4773 4939 -1207 2291 123 0 0 chr17 7849206 7849516 -77588964 + AluSx SINE Alu 1 310 -2 1037 244 88 31 chr17 7849516 7849818 -77588662 + L1ME LINE L1 4939 5279 -867 231 267 19 29 chr17 7849808 7849913 -77588567 + L1ME LINE L1 5818 5921 -249 * 2469 79 3 3 chr17 7850112 7850416 -77588064 + AluSx SINE Alu 1 304 -8 1617 104 0 58 chr17 7850623 7850864 -77587616 + AluSx SINE Alu 1 227 -85 482 160 0 0 chr17 7850939 7851014 -77587466 - AluS SINE Alu -237 76 2 243 235 20 0 chr17 7851050 7851101 -77587379 - MLT1B LTR MaLR -295 95 44 668 198 28 55 chr17 7851881 7852063 -77586417 + MIR SINE MIR 86 262 0 269 118 20 0 chr17 7853570 7853621 -77584859 + CT-rich Low_complexity Low_complexity 1 52 0 2302 111 3 0 chr17 7853641 7853939 -77584541 - AluSq SINE Alu -14 299 1 815 240 102 79 chr17 7854163 7854634 -77583846 - L2 LINE L2 0 3313 2832 2010 107 0 18 chr17 7854681 7854961 -77583519 + AluJb SINE Alu 1 275 -37 736 240 158 58 chr17 7854973 7855335 -77583145 - L2 LINE L2 -1961 1353 956 2181 118 3 0 chr17 7855907 7856194 -77582286 - AluSq SINE Alu -25 288 1 276 263 50 12 chr17 7856233 7856313 -77582167 - L2 LINE L2 -15 3257 3175 753 158 0 0 chr17 7856844 7856971 -77581509 + FLAM_C SINE Alu 2 128 -5 399 198 31 0 chr17 7857143 7857239 -77581241 + MER5A DNA MER1_type 4 102 -87 278 278 93 0 chr17 7857312 7857420 -77581060 - L2 LINE L2 -1021 2293 2176 501 231 134 43 chr17 7860395 7860581 -77577899 + MIR SINE MIR 3 205 -57 869 135 8 15 chr17 7860852 7860985 -77577495 + AluJb SINE Alu 1 132 -180 497 308 0 15 chr17 7861181 7861451 -77577029 + (TG)n Simple_repeat Simple_repeat 1 265 0 629 97 11 0 chr17 7861838 7861931 -77576549 + AluSg1 SINE Alu 2 95 -214 347 324 15 93 chr17 7861970 7862082 -77576398 - HAL1 LINE L1 -13 2494 2404 1974 104 90 0 chr17 7862082 7862360 -77576120 - AluSp SINE Alu -10 303 1 347 324 15 93 chr17 7862360 7862451 -77576029 - HAL1 LINE L1 -103 2404 2307 469 300 104 58 chr17 7862478 7862708 -77575772 - L1MC5 LINE L1 -32 8010 7660 184 264 264 0 chr17 7862936 7863027 -77575453 + L2 LINE L2 3156 3270 -2 2387 97 0 0 chr17 7863027 7863326 -77575154 - AluSx SINE Alu -13 299 1 531 261 31 0 chr17 7863399 7863560 -77574920 - L1MC4a LINE L1 -1959 5849 5684 705 118 26 92 chr17 7863562 7863714 -77574766 + FLAM_C SINE Alu 2 143 0 1970 107 0 92 chr17 7863987 7864313 -77574167 - AluSq SINE Alu -17 296 1 938 191 0 0 chr17 7864313 7864465 -77574015 - FRAM SINE Alu -9 167 16 2455 88 3 7 chr17 7864884 7865192 -77573288 - AluSx SINE Alu -5 307 1 214 171 0 0 chr17 7865636 7865671 -77572809 + (CA)n Simple_repeat Simple_repeat 1 35 0 2262 124 0 3 chr17 7866315 7866622 -77571858 - AluSx SINE Alu -6 306 1 346 196 196 0 chr17 7868118 7868215 -77570265 + MIR SINE MIR 17 132 -130 422 293 32 16 chr17 7868256 7868379 -77570101 - L2 LINE L2 -6 3307 3183 312 192 88 16 chr17 7868624 7868672 -77569808 - L1MEd LINE L1 -3175 2954 2911 2435 68 0 29 chr17 7868672 7868980 -77569500 + AluSx SINE Alu 1 299 -13 312 192 88 16 chr17 7868980 7869056 -77569424 - L1MEd LINE L1 -3218 2911 2821 788 280 21 7 chr17 7869080 7869362 -77569118 - L1M4 LINE L1 -3531 2615 2330 931 222 54 102 chr17 7869468 7869511 -77568969 - L1MEd LINE L1 -3435 2694 2650 782 222 0 18 chr17 7869511 7869678 -77568802 - FRAM SINE Alu -2 164 1 931 222 54 102 chr17 7869678 7870153 -77568327 - L1MEd LINE L1 -3479 2650 2201 269 175 0 38 chr17 7870168 7870248 -77568232 - HAL1 LINE L1 -413 2094 2018 1470 186 91 11 chr17 7870249 7870534 -77567946 - AluJb SINE Alu -4 308 1 243 0 0 0 chr17 7870547 7870574 -77567906 + (TTTTTG)n Simple_repeat Simple_repeat 3 29 0 736 263 91 51 chr17 7870583 7870698 -77567782 - HAL1 LINE L1 -481 2026 1917 2457 67 3 0 chr17 7870698 7871007 -77567473 + AluSp SINE Alu 1 310 0 736 263 91 51 chr17 7871007 7871221 -77567259 - HAL1 LINE L1 -590 1917 1683 901 183 35 6 chr17 7871221 7871390 -77567090 - AluJo SINE Alu -138 174 1 1417 279 79 47 chr17 7871396 7872171 -77566309 - L1MEd LINE L1 -5318 801 2 252 320 23 64 chr17 7872253 7872425 -77566055 - L2 LINE L2 -2299 1015 851 376 267 69 0 chr17 7872436 7872537 -77565943 - MIR SINE MIR -68 140 33 2114 142 0 10 chr17 7872572 7872882 -77565598 - AluJb SINE Alu -5 307 1 1992 103 0 0 chr17 7875206 7875459 -77563021 + AluSx SINE Alu 1 253 -59 198 0 0 0 chr17 7875461 7875483 -77562997 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 708 104 0 0 chr17 7876916 7877022 -77561458 - AluJo SINE Alu -1 311 206 1028 96 39 45 chr17 7877022 7877178 -77561302 - AluJo SINE Alu -157 155 1 2273 128 0 0 chr17 7877584 7877890 -77560590 - AluSx SINE Alu -6 306 1 2517 83 3 6 chr17 7878355 7878669 -77559811 - AluSp SINE Alu 0 313 1 3894 137 51 48 chr17 7879574 7880043 -77558437 + MER44D DNA MER2_type 1 346 -2141 2436 104 0 0 chr17 7880043 7880350 -77558130 + AluSx SINE Alu 1 307 -5 3894 137 51 48 chr17 7880350 7880611 -77557869 + MER44D DNA MER2_type 346 605 0 2152 112 3 3 chr17 7880999 7881320 -77557160 + AluSp SINE Alu 1 321 0 22 0 0 0 chr17 7881753 7881775 -77556705 + AT_rich Low_complexity Low_complexity 1 22 0 2028 138 7 0 chr17 7882057 7882347 -77556133 + AluSx SINE Alu 1 292 -20 22 0 0 0 chr17 7882347 7882369 -77556111 + AT_rich Low_complexity Low_complexity 1 22 0 201 175 0 0 chr17 7883882 7883922 -77554558 + (CAG)n Simple_repeat Simple_repeat 1 40 0 306 50 0 0 chr17 7884482 7884522 -77553958 + (CCA)n Simple_repeat Simple_repeat 2 41 0 226 253 0 36 chr17 7884540 7884623 -77553857 + C-rich Low_complexity Low_complexity 2 81 0 21 0 0 0 chr17 7889327 7889348 -77549132 + GC_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr17 7889605 7889640 -77548840 + AT_rich Low_complexity Low_complexity 1 35 0 31 0 0 0 chr17 7890349 7890380 -77548100 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr17 7890705 7890726 -77547754 + AT_rich Low_complexity Low_complexity 1 21 0 381 362 65 25 chr17 7896056 7896090 -77542390 - MIR SINE MIR -35 227 196 1528 137 23 46 chr17 7896090 7896353 -77542127 - AluJo SINE Alu -18 294 38 381 362 65 25 chr17 7896353 7896517 -77541963 - MIR SINE MIR -66 196 21 478 310 221 28 chr17 7897561 7898219 -77540261 + L2 LINE L2 2472 3267 -5 2330 101 0 13 chr17 7898398 7898714 -77539766 + AluSq SINE Alu 1 312 -1 1322 167 107 4 chr17 7900307 7900540 -77537940 - AluJo SINE Alu -55 257 1 437 148 206 77 chr17 7900540 7900565 -77537915 - Tigger4(Zombi) DNA MER2_type -186 2545 2525 2092 121 31 0 chr17 7900565 7900855 -77537625 + AluSx SINE Alu 1 299 -13 437 148 206 77 chr17 7900855 7900984 -77537496 - Tigger4(Zombi) DNA MER2_type -206 2525 1 438 248 38 15 chr17 7901128 7901261 -77537219 - MIR SINE MIR -62 200 65 374 197 0 0 chr17 7901341 7901402 -77537078 - MLT1G1 LTR MaLR -70 525 465 588 204 157 9 chr17 7901420 7901695 -77536785 - MLT1G1 LTR MaLR -194 348 3 365 237 119 17 chr17 7901840 7901958 -77536522 - L2 LINE L2 0 3272 3143 2506 43 0 68 chr17 7902027 7902350 -77536130 - AluY SINE Alu -10 301 1 2256 89 31 0 chr17 7902720 7903012 -77535468 - AluSg SINE Alu -7 303 3 304 320 107 0 chr17 7903196 7903318 -77535162 - L2 LINE L2 -7 3306 3172 603 334 218 22 chr17 7903603 7904955 -77533525 - L2 LINE L2 -1230 2084 469 2497 85 3 3 chr17 7904957 7905264 -77533216 + AluSq SINE Alu 1 307 -6 1860 160 3 3 chr17 7905267 7905574 -77532906 + AluJo SINE Alu 1 307 0 1761 165 10 13 chr17 7905679 7905982 -77532498 - AluJo SINE Alu -1 311 10 3020 135 56 4 chr17 7906008 7906564 -77531916 - L1MB7 LINE L1 -19 6165 5581 325 219 143 19 chr17 7907201 7907306 -77531174 - L1MC4a LINE L1 -1818 5990 5873 365 273 74 69 chr17 7907596 7907812 -77530668 - L1MC4a LINE L1 -1780 6028 5812 328 106 0 0 chr17 7907828 7907875 -77530605 - MER4E LTR ERV1 -69 710 664 498 313 30 20 chr17 7907900 7908101 -77530379 - L1MC4a LINE L1 -2032 5776 5574 329 344 46 7 chr17 7908228 7908379 -77530101 + MIR3 SINE MIR 16 172 -36 540 178 20 27 chr17 7908511 7908657 -77529823 - MER113 DNA MER1_type? -365 156 12 2016 93 0 15 chr17 7908819 7909088 -77529392 + AluSq SINE Alu 26 290 -23 24 53 0 0 chr17 7909089 7909127 -77529353 + AT_rich Low_complexity Low_complexity 1 38 0 351 178 48 27 chr17 7909270 7909416 -77529064 + (TA)n Simple_repeat Simple_repeat 2 150 0 32 0 0 0 chr17 7910035 7910067 -77528413 + AT_rich Low_complexity Low_complexity 1 32 0 253 186 29 29 chr17 7910355 7910425 -77528055 + GA-rich Low_complexity Low_complexity 2 71 0 245 307 18 18 chr17 7910555 7910747 -77527733 + GA-rich Low_complexity Low_complexity 1 192 0 348 309 24 18 chr17 7912178 7912343 -77526137 + (CAGG)n Simple_repeat Simple_repeat 2 167 0 244 306 8 32 chr17 7912319 7912443 -77526037 + GA-rich Low_complexity Low_complexity 6 126 0 * 234 0 0 0 chr17 7914426 7914452 -77524028 + (CA)n Simple_repeat Simple_repeat 2 27 0 381 43 0 0 chr17 7914803 7914850 -77523630 + (TA)n Simple_repeat Simple_repeat 1 47 0 360 0 0 0 chr17 7915052 7915092 -77523388 + (GGA)n Simple_repeat Simple_repeat 2 41 0 582 79 0 0 chr17 7915093 7915169 -77523311 + AluSg/x SINE Alu 153 228 -82 227 189 0 0 chr17 7915270 7915323 -77523157 + GA-rich Low_complexity Low_complexity 1 53 0 396 71 0 0 chr17 7915394 7915450 -77523030 + (CCG)n Simple_repeat Simple_repeat 2 57 0 240 35 0 0 chr17 7915676 7915705 -77522775 + (CCG)n Simple_repeat Simple_repeat 2 30 0 1976 99 21 14 chr17 8121321 8121603 -77316877 + AluSx SINE Alu 18 301 -11 2114 134 13 0 chr17 8121603 8121908 -77316572 + AluSx SINE Alu 1 309 -3 188 293 0 40 chr17 8121935 8122010 -77316470 - L2 LINE L2 0 3313 3242 634 124 10 0 chr17 8122013 8122110 -77316370 + MER4A LTR ERV1 1 98 -566 308 47 23 0 chr17 8122106 8122149 -77316331 + MER4A LTR ERV1 257 300 -364 * 2190 84 0 3 chr17 8122155 8122441 -77316039 + AluSc SINE Alu 5 289 -20 1958 152 0 3 chr17 8123240 8123549 -77314931 - AluSx SINE Alu -4 308 1 762 181 0 8 chr17 8123747 8123874 -77314606 + FLAM_C SINE Alu 1 126 -17 189 181 14 42 chr17 8124256 8124328 -77314152 + (TATATG)n Simple_repeat Simple_repeat 3 72 0 2055 134 0 0 chr17 8124438 8124737 -77313743 + AluSx SINE Alu 3 301 -11 421 224 51 0 chr17 8124820 8124918 -77313562 + MIR SINE MIR 28 130 -132 2367 85 0 0 chr17 8125160 8125467 -77313013 - AluSq SINE Alu -6 307 1 299 268 41 0 chr17 8125718 8125815 -77312665 - MLT1K LTR MaLR 0 588 488 2107 131 0 0 chr17 8125815 8126120 -77312360 + AluSx SINE Alu 1 305 -7 884 195 0 6 chr17 8126120 8126313 -77312167 + AluSg/x SINE Alu 134 312 0 269 245 137 50 chr17 8126313 8126452 -77312028 - MLT1K LTR MaLR -111 477 327 260 134 0 149 chr17 8126588 8126608 -77311872 + MER58 DNA MER1_type 2364 2385 -35 1944 98 12 67 chr17 8126608 8126935 -77311545 - AluSg SINE Alu -1 309 1 260 134 0 149 chr17 8126935 8126981 -77311499 + MER58 DNA MER1_type 2385 2420 0 277 200 50 40 chr17 8127225 8127325 -77311155 - HAL1 LINE L1 -347 2160 2060 369 175 9 85 chr17 8127401 8127497 -77310983 + AluJ/FLAM SINE Alu 1 75 -227 976 102 88 0 chr17 8127505 8127652 -77310828 + FRAM SINE Alu 1 40 0 235 284 31 16 chr17 8127846 8127973 -77310507 - L1ME3A LINE L1 -213 5957 5829 2224 91 0 7 chr17 8128016 8128323 -77310157 + AluSg SINE Alu 1 305 -5 2271 56 56 0 chr17 8128475 8128760 -77309720 + AluY SINE Alu 1 301 -10 453 318 95 0 chr17 8129260 8129439 -77309041 - MIR SINE MIR -4 258 63 1977 128 7 16 chr17 8129439 8129744 -77308736 + AluSq SINE Alu 1 302 -11 201 39 0 0 chr17 8129854 8129880 -77308600 + (TAAA)n Simple_repeat Simple_repeat 3 28 0 206 213 0 43 chr17 8129953 8130000 -77308480 + A-rich Low_complexity Low_complexity 5 49 0 990 192 63 7 chr17 8130216 8130449 -77308031 - MSTB1 LTR MaLR 0 432 175 633 251 80 54 chr17 8130589 8130939 -77307541 + LTR45 LTR ERV1 266 525 0 869 134 78 66 chr17 8130939 8131144 -77307336 - MSTB1 LTR MaLR -229 203 3 318 211 0 0 chr17 8131394 8131451 -77307029 - AluS SINE Alu -238 62 6 254 159 16 32 chr17 8131454 8131517 -77306963 + MLT1J LTR MaLR 441 502 -9 2259 102 0 0 chr17 8131803 8132098 -77306382 - AluSx SINE Alu -17 295 1 1184 150 40 0 chr17 8132684 8132849 -77305631 - AluSg/x SINE Alu -20 292 116 195 69 0 0 chr17 8132849 8132878 -77305602 + (TTTTA)n Simple_repeat Simple_repeat 4 32 0 1184 150 40 0 chr17 8132878 8132912 -77305568 - AluSg/x SINE Alu -196 116 85 962 98 15 0 chr17 8132927 8133059 -77305421 - AluSg SINE Alu -176 134 1 507 257 47 34 chr17 8133063 8133211 -77305269 + L2 LINE L2 3164 3313 0 2161 98 0 3 chr17 8133432 8133727 -77304753 - AluSc SINE Alu -15 294 1 839 287 126 59 chr17 8134530 8135144 -77303336 - L2 LINE L2 -77 3195 2473 2129 103 0 0 chr17 8135144 8135425 -77303055 + AluSg SINE Alu 1 281 -29 839 287 126 59 chr17 8135425 8135705 -77302775 - L2 LINE L2 -799 2473 2213 1826 100 38 72 chr17 8136014 8136334 -77302146 + AluSp SINE Alu 1 309 -4 1235 195 167 39 chr17 8136471 8136802 -77301678 + LTR47A LTR ERVL 2 392 -60 2032 102 24 10 chr17 8136802 8137097 -77301383 - AluSx SINE Alu -4 308 10 1235 195 167 39 chr17 8137097 8137154 -77301326 + LTR47A LTR ERVL 392 440 -12 2150 89 31 0 chr17 8137778 8138069 -77300411 - AluSg SINE Alu 0 310 11 744 253 23 73 chr17 8138251 8138512 -77299968 - MER21B LTR ERV1 -151 712 465 984 112 0 0 chr17 8138522 8138656 -77299824 + AluSq/x SINE Alu 3 136 -177 2440 74 3 0 chr17 8138656 8138968 -77299512 + AluSp SINE Alu 1 313 0 460 72 58 0 chr17 8138989 8139058 -77299422 + Alu SINE Alu 230 302 -8 2274 92 0 3 chr17 8139058 8139363 -77299117 + AluY SINE Alu 1 304 -7 1655 148 30 11 chr17 8139365 8139636 -77298844 - AluJo SINE Alu -36 276 1 351 294 188 60 chr17 8139722 8140042 -77298438 - L2 LINE L2 -41 3231 2857 2221 83 3 3 chr17 8140042 8140343 -77298137 + AluSx SINE Alu 1 301 -11 351 294 188 60 chr17 8140343 8140390 -77298090 - L2 LINE L2 -415 2857 2817 317 78 0 0 chr17 8140769 8140820 -77297660 - AluSp/q SINE Alu 0 303 253 902 123 27 0 chr17 8140826 8140972 -77297508 - AluJb SINE Alu -26 286 137 1725 159 17 7 chr17 8140972 8141273 -77297207 - AluJb SINE Alu -8 304 1 828 244 53 8 chr17 8141274 8141536 -77296944 + Charlie4a DNA MER1_type 78 351 -157 1713 176 0 23 chr17 8141538 8141845 -77296635 - AluSx SINE Alu -12 300 1 814 187 33 0 chr17 8141848 8141998 -77296482 + AluJb SINE Alu 156 310 -2 321 266 0 0 chr17 8141998 8142077 -77296403 + Charlie4a DNA MER1_type 430 508 0 1020 83 0 0 chr17 8143256 8143389 -77295091 - AluSq/x SINE Alu -179 133 1 191 88 29 0 chr17 8143398 8143432 -77295048 - MIR SINE MIR -65 143 109 1707 156 6 41 chr17 8143684 8143998 -77294482 + AluJo SINE Alu 1 303 -9 2153 104 7 10 chr17 8144327 8144634 -77293846 + AluSp SINE Alu 1 306 -7 200 314 20 0 chr17 8144649 8144700 -77293780 - L2 LINE L2 -30 3242 3191 1429 132 29 50 chr17 8145147 8145428 -77293052 + AluJb SINE Alu 1 275 -37 252 0 0 0 chr17 8145430 8145458 -77293022 + (CAAT)n Simple_repeat Simple_repeat 4 31 0 2188 87 0 20 chr17 8148763 8148895 -77289585 + AluSx SINE Alu 4 137 -175 2152 93 0 0 chr17 8148895 8149200 -77289280 + AluSg SINE Alu 2 306 0 2188 87 0 20 chr17 8149200 8149366 -77289114 + AluSx SINE Alu 137 297 -15 328 257 0 0 chr17 8150143 8150213 -77288267 + MIR SINE MIR 61 130 -78 448 282 92 48 chr17 8150366 8150531 -77287949 - MIR SINE MIR 0 262 83 2442 52 3 0 chr17 8150531 8150841 -77287639 - AluY SINE Alu 0 311 1 448 282 92 48 chr17 8150841 8150902 -77287578 - MIR SINE MIR -179 83 26 2348 70 0 0 chr17 8150904 8151203 -77287277 - AluY SINE Alu -12 299 1 2360 60 23 0 chr17 8152903 8153204 -77285276 - AluY SINE Alu -3 308 1 1272 200 148 38 chr17 8153204 8153726 -77284754 - L1MC3 LINE L1 -892 7103 6640 2155 114 0 0 chr17 8153726 8154025 -77284455 + AluSx SINE Alu 1 299 -13 1272 200 148 38 chr17 8154025 8154299 -77284181 - L1MC3 LINE L1 -1355 6640 6149 25 0 0 0 chr17 8154317 8154342 -77284138 + AT_rich Low_complexity Low_complexity 1 25 0 2021 101 3 14 chr17 8154349 8154637 -77283843 + AluSp SINE Alu 3 287 -26 396 55 0 0 chr17 8154641 8154696 -77283784 + (TCTA)n Simple_repeat Simple_repeat 3 57 0 921 100 0 50 chr17 8154698 8154838 -77283642 + AluSc SINE Alu 1 133 -176 2347 71 3 0 chr17 8154838 8155135 -77283345 + AluY SINE Alu 1 298 -13 2207 94 3 10 chr17 8155139 8155474 -77283006 + AluSx SINE Alu 1 312 0 672 142 0 0 chr17 8155486 8155613 -77282867 - L1M4 LINE L1 -1070 5076 4950 397 149 11 11 chr17 8155633 8155720 -77282760 + CT-rich Low_complexity Low_complexity 1 87 0 456 218 28 7 chr17 8155720 8155862 -77282618 - L1M4 LINE L1 -1251 4895 4751 847 213 197 8 chr17 8156368 8156607 -77281873 - MLT1K LTR MaLR -11 577 294 1940 171 47 75 chr17 8156607 8157058 -77281422 - LTR8 LTR ERV1 0 691 254 2207 105 0 3 chr17 8157060 8157364 -77281116 - AluSg SINE Alu -7 303 1 1698 183 146 84 chr17 8157364 8157422 -77281058 - LTR8 LTR ERV1 -109 582 529 2296 46 0 0 chr17 8157422 8157732 -77280748 - AluY SINE Alu 0 310 1 1698 183 146 84 chr17 8157732 8158220 -77280260 - LTR8 LTR ERV1 -162 529 1 207 0 0 0 chr17 8158234 8158257 -77280223 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1958 89 33 0 chr17 8158714 8159008 -77279472 + AluSg SINE Alu 1 303 0 2283 102 0 0 chr17 8159501 8159804 -77278676 - AluSq SINE Alu -10 303 1 1270 167 83 62 chr17 8159812 8159968 -77278512 - AluJo SINE Alu -16 296 130 2217 97 0 3 chr17 8159968 8160267 -77278213 - AluSq SINE Alu -15 298 1 1270 167 83 62 chr17 8160267 8160398 -77278082 - AluJo SINE Alu -182 130 3 414 0 0 0 chr17 8160498 8160544 -77277936 + (CA)n Simple_repeat Simple_repeat 2 47 0 553 286 12 12 chr17 8164044 8164131 -77274349 + MIR SINE MIR 13 102 -160 2169 101 0 3 chr17 8164131 8164429 -77274051 + AluSq SINE Alu 1 297 -16 553 286 12 12 chr17 8164429 8164509 -77273971 + MIR SINE MIR 101 180 -82 807 157 0 50 chr17 8165002 8165142 -77273338 + FLAM_C SINE Alu 1 133 0 420 195 0 0 chr17 8166775 8166857 -77271623 + MIR SINE MIR 43 124 -84 495 219 42 8 chr17 8166910 8167029 -77271451 + MER106A DNA MER1_type 1 123 -113 1999 110 21 0 chr17 8167264 8167546 -77270934 - AluSx SINE Alu -24 288 1 1345 166 24 20 chr17 8167614 8167861 -77270619 - AluJo SINE Alu -62 250 3 511 284 193 9 chr17 8167980 8168198 -77270282 - MIR SINE MIR -3 259 2 21 0 0 0 chr17 8168217 8168238 -77270242 + AT_rich Low_complexity Low_complexity 1 21 0 2234 80 13 7 chr17 8168248 8168547 -77269933 + AluSx SINE Alu 1 301 -11 711 244 11 22 chr17 8168550 8168730 -77269750 - MIR SINE MIR -14 248 71 2024 122 10 0 chr17 8170268 8170564 -77267916 - AluSx SINE Alu 0 312 14 927 102 0 36 chr17 8170587 8170724 -77267756 - FLAM_C SINE Alu -1 132 1 1276 238 84 27 chr17 8170731 8171298 -77267182 - L2 LINE L2 0 3313 2725 204 279 0 0 chr17 8172219 8172262 -77266218 + (TG)n Simple_repeat Simple_repeat 2 44 0 186 103 0 0 chr17 8173337 8173366 -77265114 + (TGG)n Simple_repeat Simple_repeat 2 30 0 2229 131 3 0 chr17 8173466 8173771 -77264709 + AluJb SINE Alu 1 306 -6 565 207 29 81 chr17 8173817 8173991 -77264489 - L2 LINE L2 -1 3312 3148 1101 96 0 0 chr17 8173993 8174129 -77264351 + AluSq/x SINE Alu 1 136 -177 2304 85 0 36 chr17 8174129 8174434 -77264046 + AluSx SINE Alu 1 294 -18 2550 70 3 0 chr17 8174438 8174740 -77263740 + AluSp SINE Alu 1 303 -10 282 306 38 50 chr17 8174832 8174992 -77263488 - L2 LINE L2 -236 3077 2920 1788 149 28 84 chr17 8176113 8176157 -77262323 - LTR56 LTR ERV1 0 445 400 2284 112 0 6 chr17 8176157 8176469 -77262011 + AluSx SINE Alu 1 310 -2 1788 149 28 84 chr17 8176469 8176827 -77261653 - LTR56 LTR ERV1 -45 400 70 1813 118 0 0 chr17 8176827 8177073 -77261407 - AluJo SINE Alu -13 299 54 1788 149 28 84 chr17 8177073 8177133 -77261347 - LTR56 LTR ERV1 -375 70 8 21 36 0 0 chr17 8177738 8177766 -77260714 + GC_rich Low_complexity Low_complexity 1 28 0 2079 124 10 3 chr17 8178393 8178692 -77259788 - AluSg SINE Alu -9 301 1 303 269 34 139 chr17 8178714 8179038 -77259442 + MLT1K LTR MaLR 188 477 -111 946 195 0 6 chr17 8179038 8179231 -77259249 - AluSg/x SINE Alu 0 310 132 2283 125 0 0 chr17 8179231 8179534 -77258946 - AluSx SINE Alu -7 305 3 189 181 14 42 chr17 8179644 8179716 -77258764 + (CATATA)n Simple_repeat Simple_repeat 3 72 0 2176 89 3 51 chr17 8179987 8180179 -77258301 - AluSx SINE Alu -14 298 125 2604 66 0 0 chr17 8180179 8180484 -77257996 - AluY SINE Alu -6 305 1 2176 89 3 51 chr17 8180484 8180604 -77257876 - AluSx SINE Alu -187 125 1 2546 60 7 0 chr17 8180804 8181104 -77257376 + AluSp SINE Alu 2 303 -10 1241 276 40 13 chr17 8181249 8181647 -77256833 + MLT1I LTR MaLR 1 409 0 571 279 63 123 chr17 8181820 8182308 -77256172 - LTR67 LTR ERVL 0 557 99 2126 149 7 0 chr17 8182352 8182660 -77255820 - AluSx SINE Alu -2 310 1 286 206 21 103 chr17 8182971 8183045 -77255435 + MIR SINE MIR 75 142 -120 2527 39 0 0 chr17 8183045 8183369 -77255111 + AluY SINE Alu 1 324 0 286 206 21 103 chr17 8183369 8183390 -77255090 + MIR SINE MIR 142 163 -99 991 228 14 0 chr17 8183390 8183605 -77254875 - LTR16C LTR ERVL 0 491 274 2271 100 10 0 chr17 8184018 8184308 -77254172 - AluSx SINE Alu -18 294 2 1575 141 0 28 chr17 8184309 8184558 -77253922 + AluJo SINE Alu 67 308 -4 784 179 0 8 chr17 8185540 8185674 -77252806 + FLAM_A SINE Alu 1 133 0 2290 107 0 3 chr17 8185678 8185976 -77252504 + AluSp SINE Alu 1 297 -16 1058 146 5 47 chr17 8186250 8186442 -77252038 - AluJo SINE Alu -2 310 127 616 232 32 13 chr17 8186727 8186836 -77251644 - MIR SINE MIR -73 189 75 367 167 26 0 chr17 8186836 8186914 -77251566 + MER116 DNA Mariner 1 80 0 616 232 32 13 chr17 8186914 8186959 -77251521 - MIR SINE MIR -187 75 32 2263 95 9 25 chr17 8187007 8187322 -77251158 - AluSq SINE Alu -3 310 1 22 0 0 0 chr17 8187333 8187355 -77251125 + AT_rich Low_complexity Low_complexity 1 22 0 1669 161 13 33 chr17 8187500 8187804 -77250676 - AluJo SINE Alu -14 298 1 538 298 114 35 chr17 8187814 8187906 -77250574 - L1ME LINE L1 -297 5824 5741 2132 144 0 3 chr17 8187906 8188204 -77250276 - AluSx SINE Alu -15 297 1 538 298 114 35 chr17 8188204 8188453 -77250027 - L1ME LINE L1 -380 5741 5456 1034 91 0 8 chr17 8188453 8188585 -77249895 - AluSc SINE Alu -178 131 1 306 0 0 0 chr17 8188587 8188621 -77249859 + (TG)n Simple_repeat Simple_repeat 2 35 0 1699 116 5 0 chr17 8188635 8188859 -77249621 - AluSx SINE Alu -86 226 2 716 186 0 0 chr17 8188871 8188995 -77249485 - FLAM_C SINE Alu -9 124 1 323 245 72 10 chr17 8188999 8189146 -77249334 - L1M3 LINE L1 -741 5430 5287 375 315 0 93 chr17 8189180 8189260 -77249220 - L1ME LINE L1 -659 5462 5403 2200 101 37 3 chr17 8189260 8189557 -77248923 - AluSg SINE Alu -2 308 2 375 315 0 93 chr17 8189557 8189638 -77248842 - L1ME LINE L1 -718 5403 5316 184 206 59 59 chr17 8190631 8190699 -77247781 + L2 LINE L2 186 253 -3061 4596 140 19 29 chr17 8191565 8192445 -77246035 - pTR5 LTR ERV1 -604 1600 31 1918 109 0 0 chr17 8192498 8192746 -77245734 + AluSx SINE Alu 1 248 -64 2083 84 14 28 chr17 8192821 8193138 -77245342 - AluSp SINE Alu 0 313 1 365 117 67 0 chr17 8193483 8193543 -77244937 - Charlie8 DNA MER1_type -1 2416 2353 628 177 8 16 chr17 8193588 8193712 -77244768 - MLT1F LTR MaLR 0 542 420 26 0 0 0 chr17 8193716 8193742 -77244738 + AT_rich Low_complexity Low_complexity 1 26 0 2410 145 25 20 chr17 8193746 8193979 -77244501 - L1MA8 LINE L1 -20 6271 6041 2361 52 55 3 chr17 8193979 8194269 -77244211 - AluY SINE Alu -5 306 2 2284 110 0 3 chr17 8194270 8194569 -77243911 - AluSq SINE Alu -14 299 2 2410 145 25 20 chr17 8194569 8194780 -77243700 - L1MA8 LINE L1 -249 6042 5823 2215 145 0 0 chr17 8194780 8195090 -77243390 - AluSq SINE Alu -3 310 1 1627 131 41 28 chr17 8195454 8195744 -77242736 + AluSp SINE Alu 1 294 -19 431 239 80 75 chr17 8195860 8196061 -77242419 + LTR67 LTR ERVL 348 549 -8 254 216 40 14 chr17 8196070 8196144 -77242336 - Charlie8 DNA MER1_type -2254 163 88 1579 154 0 82 chr17 8196154 8196337 -77242143 - AluJo SINE Alu -10 292 96 2174 111 0 54 chr17 8196337 8196484 -77241996 + AluSx SINE Alu 1 154 -158 2361 68 4 0 chr17 8196484 8196764 -77241716 + AluSp SINE Alu 1 281 -32 273 29 0 0 chr17 8196765 8196799 -77241681 + (CAAAA)n Simple_repeat Simple_repeat 1 34 0 2174 111 0 54 chr17 8196799 8196965 -77241515 + AluSx SINE Alu 153 299 -13 1579 154 0 82 chr17 8196965 8197099 -77241381 - AluJo SINE Alu -206 96 1 1075 201 4 39 chr17 8197119 8197353 -77241127 - MLT1A1 LTR MaLR 0 365 140 1039 67 0 0 chr17 8197359 8197479 -77241001 + AluSq/x SINE Alu 1 120 -192 388 80 0 0 chr17 8197483 8197533 -77240947 - AluSp SINE Alu -43 260 211 1342 137 89 117 chr17 8197533 8197994 -77240486 - LTR7 LTR ERV1 -2 448 1 1800 74 5 0 chr17 8197994 8198209 -77240271 - AluSp SINE Alu -97 216 1 463 193 42 17 chr17 8198244 8198363 -77240117 + MLT2F LTR ERVL 12 133 -530 627 250 39 34 chr17 8198381 8198492 -77239988 + MLT1I LTR MaLR 201 315 -94 1349 224 15 64 chr17 8198492 8198885 -77239595 + MLT1A2 LTR MaLR 1 374 0 627 250 39 34 chr17 8198885 8198981 -77239499 + MLT1I LTR MaLR 315 409 0 1831 174 0 0 chr17 8199201 8199505 -77238975 + AluJb SINE Alu 9 312 0 331 170 0 0 chr17 8199680 8199733 -77238747 + Tigger7 DNA MER2_type 26 78 -2409 2377 102 3 0 chr17 8199737 8200040 -77238440 + AluSx SINE Alu 1 304 -8 438 177 0 0 chr17 8200279 8200358 -77238122 + FLAM_A SINE Alu 29 107 -35 4001 150 37 47 chr17 8200369 8200767 -77237713 + L1MC2 LINE L1 5186 5587 -757 1826 135 59 17 chr17 8200767 8201056 -77237424 - AluSg SINE Alu -9 301 1 4001 150 37 47 chr17 8201056 8201089 -77237391 + L1MC2 LINE L1 5587 5619 -725 2432 71 0 3 chr17 8201089 8201384 -77237096 - AluY SINE Alu -17 294 1 4001 150 37 47 chr17 8201384 8201881 -77236599 + L1MC2 LINE L1 5619 6106 -238 995 193 6 0 chr17 8201881 8202047 -77236433 + FRAM SINE Alu 1 162 -14 317 125 0 0 chr17 8202051 8202099 -77236381 + L1MC2 LINE L1 6103 6150 -194 983 85 0 0 chr17 8202099 8202228 -77236252 + AluSp/q SINE Alu 181 309 -4 2241 112 23 0 chr17 8202287 8202590 -77235890 - AluSx SINE Alu -2 310 1 2831 173 73 38 chr17 8203054 8203157 -77235323 - L1MC4 LINE L1 0 8322 8224 2447 72 7 0 chr17 8203157 8203449 -77235031 - AluSg SINE Alu -14 296 3 2831 173 73 38 chr17 8203449 8203504 -77234976 - L1MC4 LINE L1 -98 8224 8172 297 0 0 0 chr17 8203504 8203537 -77234943 + (CA)n Simple_repeat Simple_repeat 1 33 0 2831 173 73 38 chr17 8203537 8204059 -77234421 - L1MC4 LINE L1 -150 8172 7617 258 318 47 0 chr17 8204246 8204331 -77234149 + L2 LINE L2 3224 3312 -1 228 67 0 0 chr17 8205044 8205074 -77233406 + (TAA)n Simple_repeat Simple_repeat 2 31 0 234 330 23 23 chr17 8206068 8206156 -77232324 - MIR3 SINE MIR -22 186 99 1202 153 113 4 chr17 8206364 8206593 -77231887 - AluJo SINE Alu -58 254 1 2372 70 10 23 chr17 8206805 8207107 -77231373 + AluY SINE Alu 1 298 -13 2128 228 110 9 chr17 8207297 8207832 -77230648 - MLT1G1 LTR MaLR -5 590 2 2086 129 17 0 chr17 8208120 8208407 -77230073 - AluSx SINE Alu -20 292 1 402 192 14 68 chr17 8208535 8208630 -77229850 - L1MC4 LINE L1 -1339 6983 6884 2364 106 0 0 chr17 8208630 8208933 -77229547 - AluSx SINE Alu -9 303 1 402 192 14 68 chr17 8208933 8208960 -77229520 - L1MC4 LINE L1 -1438 6884 1974 331 267 82 22 chr17 8208972 8209107 -77229373 - L1M4 LINE L1 -1182 4964 4822 969 205 23 0 chr17 8209110 8209281 -77229199 - AluJb SINE Alu -1 311 137 659 275 24 29 chr17 8209376 8209517 -77228963 - Charlie8 DNA MER1_type -134 207 66 2347 113 0 0 chr17 8209517 8209819 -77228661 + AluSq SINE Alu 2 303 -10 659 275 24 29 chr17 8209819 8209884 -77228596 - Charlie8 DNA MER1_type -275 66 2 212 243 36 126 chr17 8210422 8210533 -77227947 - MIR SINE MIR -41 221 121 2235 84 6 22 chr17 8210611 8210922 -77227558 + AluSg SINE Alu 1 306 -4 292 301 58 19 chr17 8210965 8211068 -77227412 - L2 LINE L2 -2 3270 3164 2092 119 10 3 chr17 8211491 8211784 -77226696 - AluSx SINE Alu -17 295 1 2115 112 7 0 chr17 8212168 8212446 -77226034 - AluSg SINE Alu -30 280 1 2285 91 0 10 chr17 8212643 8212940 -77225540 + AluSc SINE Alu 1 294 -15 1200 117 0 6 chr17 8212940 8213103 -77225377 + AluSc SINE Alu 132 293 -16 1642 12 0 0 chr17 8213103 8213273 -77225207 - SVA Other Other -99 1287 1118 901 20 0 0 chr17 8213273 8213374 -77225106 + SVA Other Other 1284 1384 -2 696 152 80 16 chr17 8213405 8213530 -77224950 + FLAM_C SINE Alu 1 133 0 416 225 80 14 chr17 8213536 8213674 -77224806 + MLT1C LTR MaLR 27 173 -332 1080 217 34 49 chr17 8213837 8214061 -77224419 + MLT1C LTR MaLR 205 426 -41 2203 124 7 0 chr17 8214061 8214359 -77224121 - AluSx SINE Alu -12 300 1 1080 217 34 49 chr17 8214359 8214401 -77224079 + MLT1C LTR MaLR 426 467 0 2218 106 7 3 chr17 8216306 8216599 -77221881 + AluSx SINE Alu 1 294 -18 623 84 0 75 chr17 8217793 8217900 -77220580 - AluJb SINE Alu -179 133 35 * 666 180 0 9 chr17 8217899 8218010 -77220470 - AluSq/x SINE Alu -202 111 2 856 153 0 0 chr17 8218203 8218334 -77220146 + FLAM_C SINE Alu 3 133 0 10105 59 9 85 chr17 8218554 8220053 -77218427 + SVA Other Other 1 1386 0 2192 94 34 0 chr17 8220072 8220369 -77218111 + AluY SINE Alu 1 307 -4 474 292 20 64 chr17 8220381 8220420 -77218060 + MER102b DNA MER1_type 97 136 -1292 2394 81 0 0 chr17 8220420 8220715 -77217765 - AluY SINE Alu -16 295 1 474 292 20 64 chr17 8220715 8220925 -77217555 + MER102b DNA MER1_type 136 335 -6 1083 128 75 102 chr17 8220929 8221155 -77217325 - AluJb SINE Alu -6 306 87 397 284 123 25 chr17 8221670 8221832 -77216648 + MIR SINE MIR 46 223 -39 184 299 0 52 chr17 8221857 8221934 -77216546 + L2 LINE L2 2993 3065 -207 2081 133 0 16 chr17 8223452 8223761 -77214719 + AluSx SINE Alu 1 304 -8 839 126 8 8 chr17 8223781 8223908 -77214572 + AluSp/q SINE Alu 170 296 -17 277 262 177 26 chr17 8224104 8224368 -77214112 - L2 LINE L2 -56 3257 2920 478 230 119 0 chr17 8224387 8224513 -77213967 - MER5A DNA MER1_type -2 187 47 633 100 20 10 chr17 8224578 8224678 -77213802 - AluSp/q SINE Alu -1 312 212 1969 122 21 10 chr17 8224692 8224980 -77213500 + AluSx SINE Alu 1 291 -21 3271 145 46 55 chr17 8226094 8226791 -77211689 + LTR8 LTR ERV1 1 691 0 325 165 126 4 chr17 8226883 8227044 -77211436 + AluJo SINE Alu 70 282 -20 2355 73 0 10 chr17 8227044 8227346 -77211134 + AluSq SINE Alu 1 299 -14 2337 66 36 10 chr17 8229430 8229447 -77209033 - AluSq SINE Alu 0 313 298 558 0 0 0 chr17 8229447 8229509 -77208971 + (TG)n Simple_repeat Simple_repeat 2 63 0 2337 66 36 10 chr17 8229509 8229796 -77208684 - AluSq SINE Alu -15 298 1 608 265 64 23 chr17 8229904 8230123 -77208357 - MIR SINE MIR 0 262 35 785 171 16 0 chr17 8230284 8230413 -77208067 + FLAM_C SINE Alu 2 132 -11 2320 63 0 11 chr17 8230450 8230774 -77207706 + AluY SINE Alu 5 311 0 508 259 131 40 chr17 8230780 8231132 -77207348 + L1ME4a LINE L1 5613 5996 -125 22 0 0 0 chr17 8231444 8231466 -77207014 + AT_rich Low_complexity Low_complexity 1 22 0 747 158 6 11 chr17 8231483 8231660 -77206820 + (TAGA)n Simple_repeat Simple_repeat 3 178 0 407 210 3 27 chr17 8231685 8231983 -77206497 + (TAGA)n Simple_repeat Simple_repeat 1 290 0 679 214 19 44 chr17 8231984 8232143 -77206337 - MIR SINE MIR -10 252 98 292 262 0 0 chr17 8232124 8232185 -77206295 - MIR SINE MIR -67 141 81 * 602 100 0 0 chr17 8232581 8232661 -77205819 + AluSc SINE Alu 202 281 -28 402 57 0 0 chr17 8233458 8233511 -77204969 + (CA)n Simple_repeat Simple_repeat 2 54 0 405 264 40 35 chr17 8233725 8233899 -77204581 + L3 LINE CR1 997 1171 -406 194 233 75 120 chr17 8234008 8234141 -77204339 + MER5A DNA MER1_type 3 129 -60 * 250 267 111 11 chr17 8234059 8234149 -77204331 - MER5A DNA MER1_type -27 162 64 2128 91 45 3 chr17 8234365 8234651 -77203829 + AluSx SINE Alu 1 298 -14 295 71 18 18 chr17 8234759 8234815 -77203665 + (CAAAAA)n Simple_repeat Simple_repeat 4 59 0 1256 171 24 0 chr17 8234829 8235075 -77203405 + L1M3 LINE L1 5483 5734 -449 335 295 124 47 chr17 8236464 8236593 -77201887 - MER91A DNA MER1_type -36 160 22 1822 104 0 50 chr17 8236861 8237121 -77201359 - AluSx SINE Alu -65 247 1 2192 107 0 26 chr17 8237401 8237709 -77200771 - AluSx SINE Alu -11 301 2 1535 146 31 8 chr17 8237748 8238002 -77200478 + AluSx SINE Alu 1 260 -52 1570 72 5 5 chr17 8238097 8238292 -77200188 + AluY SINE Alu 1 195 -116 460 171 0 0 chr17 8238619 8238695 -77199785 + MIR3 SINE MIR 87 162 -46 2241 157 122 9 chr17 8238936 8239387 -77199093 - MLT1D LTR MaLR 0 505 4 576 239 70 35 chr17 8240435 8240518 -77197962 - L1ME LINE L1 -331 5790 5711 2352 96 0 3 chr17 8240518 8240819 -77197661 + AluSp SINE Alu 1 300 -13 576 239 70 35 chr17 8240819 8240965 -77197515 - L1ME LINE L1 -410 5711 5553 2047 68 0 0 chr17 8240978 8241214 -77197266 + AluSg SINE Alu 61 296 -14 483 96 0 14 chr17 8241941 8242014 -77196466 - MER5A DNA MER1_type -83 106 35 247 175 41 124 chr17 8241943 8242040 -77196440 + MER5A DNA MER1_type 96 184 -5 * 815 243 17 6 chr17 8242176 8242353 -77196127 + MIR SINE MIR 76 254 -8 1999 120 14 0 chr17 8242454 8242730 -77195750 + AluSg1 SINE Alu 1 280 -29 212 257 168 26 chr17 8243148 8243261 -77195219 - L2 LINE L2 -10 3262 3134 776 63 9 0 chr17 8243999 8244110 -77194370 + (TAGA)n Simple_repeat Simple_repeat 2 113 0 261 0 0 0 chr17 8244175 8244204 -77194276 + (CA)n Simple_repeat Simple_repeat 2 30 0 2369 100 0 0 chr17 8244466 8244756 -77193724 + AluSg SINE Alu 3 292 -18 475 304 49 104 chr17 8244891 8245256 -77193224 + L2 LINE L2 2928 3272 0 2589 42 0 10 chr17 8245489 8245795 -77192685 + AluY SINE Alu 1 303 -8 1103 106 0 0 chr17 8245800 8245941 -77192539 + AluSq/x SINE Alu 1 141 -172 652 208 107 0 chr17 8246109 8246258 -77192222 - MIR SINE MIR -42 220 56 294 225 181 75 chr17 8246256 8246416 -77192064 - MIR3 SINE MIR -11 197 21 * 403 232 165 52 chr17 8246808 8247153 -77191327 + L1ME4a LINE L1 5738 6121 0 695 235 9 0 chr17 8247224 8247241 -77191239 + GA-rich Low_complexity Low_complexity 1 16 -529 1730 201 7 3 chr17 8247241 8247549 -77190931 + AluJb SINE Alu 1 309 -3 695 235 9 0 chr17 8247549 8247765 -77190715 + GA-rich Low_complexity Low_complexity 16 545 0 473 314 12 40 chr17 8247823 8248075 -77190405 + L1ME4a LINE L1 5309 5553 -2255 1377 260 72 100 chr17 8248095 8249023 -77189457 + HAL1 LINE L1 16 906 -1601 1437 148 186 11 chr17 8249023 8249286 -77189194 + AluSg1 SINE Alu 1 309 0 1377 260 72 100 chr17 8249286 8249537 -77188943 + HAL1 LINE L1 905 1162 -1345 1491 245 90 20 chr17 8249656 8250255 -77188225 + HAL1 LINE L1 1126 1766 -741 * 1613 115 0 8 chr17 8250247 8250500 -77187980 + L1MB3 LINE L1 5892 6142 -41 2173 96 0 4 chr17 8250500 8250780 -77187700 + AluSg SINE Alu 1 279 -31 1771 127 50 4 chr17 8250834 8251119 -77187361 + AluJb SINE Alu 11 307 0 1204 190 5 5 chr17 8251167 8251372 -77187108 + AluJb SINE Alu 100 304 -8 231 125 0 0 chr17 8251372 8251412 -77187068 + (GA)n Simple_repeat Simple_repeat 1 40 0 354 211 141 122 chr17 8251428 8251732 -77186748 + HAL1 LINE L1 1721 2030 -477 665 191 8 0 chr17 8251732 8251858 -77186622 + FLAM_A SINE Alu 5 131 -2 2525 58 0 0 chr17 8251869 8252161 -77186319 - AluY SINE Alu -19 292 1 935 266 64 10 chr17 8252162 8252553 -77185927 + L1ME4a LINE L1 5552 5963 -158 364 198 29 77 chr17 8253779 8253818 -77184662 + MIR SINE MIR 57 96 -139 2390 89 0 0 chr17 8253818 8254111 -77184369 + AluSx SINE Alu 3 295 -17 364 198 29 77 chr17 8254111 8254187 -77184293 + MIR SINE MIR 96 167 -68 597 92 92 0 chr17 8254287 8254374 -77184106 - AluJ/FLAM SINE Alu -216 96 2 1252 264 81 49 chr17 8254382 8254434 -77184046 - L1MC4a LINE L1 -1826 5982 5933 2486 88 0 0 chr17 8254434 8254739 -77183741 - AluSx SINE Alu -7 305 1 1252 264 81 49 chr17 8254739 8255293 -77183187 - L1MC4a LINE L1 -1875 5933 5357 2454 73 3 3 chr17 8255317 8255619 -77182861 - AluSg SINE Alu 0 310 9 2398 72 14 0 chr17 8256027 8256317 -77182163 - AluSg SINE Alu -16 294 1 203 56 83 0 chr17 8258111 8258147 -77180333 + (GCCTG)n Simple_repeat Simple_repeat 5 43 0 275 320 0 24 chr17 8258564 8258689 -77179791 + CT-rich Low_complexity Low_complexity 2 123 0 690 321 81 29 chr17 8259104 8259477 -77179003 - MARNA DNA Mariner -14 572 167 2200 110 0 13 chr17 8259477 8259778 -77178702 - AluSx SINE Alu -9 303 7 690 321 81 29 chr17 8259778 8259884 -77178596 - MARNA DNA Mariner -419 167 68 777 243 63 29 chr17 8260329 8260535 -77177945 + MIR SINE MIR 50 262 0 180 77 0 0 chr17 8260941 8260967 -77177513 + (TCCA)n Simple_repeat Simple_repeat 3 28 0 393 257 119 9 chr17 8260974 8261083 -77177397 - L2 LINE L2 -6 3307 3187 345 336 36 7 chr17 8261200 8261340 -77177140 - MIR3 SINE MIR -16 192 49 224 227 0 67 chr17 8261748 8261823 -77176657 + CT-rich Low_complexity Low_complexity 4 73 0 25 0 0 0 chr17 8262055 8262080 -77176400 + AT_rich Low_complexity Low_complexity 1 25 0 404 261 162 0 chr17 8262080 8262222 -77176258 - MIR SINE MIR -1 261 97 216 111 0 0 chr17 8262606 8262642 -77175838 + (TC)n Simple_repeat Simple_repeat 1 36 0 330 292 104 10 chr17 8263403 8263605 -77174875 + L1ME4a LINE L1 5844 6064 -57 2059 138 7 14 chr17 8263650 8263947 -77174533 + AluSx SINE Alu 3 297 -15 2074 138 3 3 chr17 8264210 8264508 -77173972 + AluJb SINE Alu 1 298 -14 184 255 85 0 chr17 8264520 8264567 -77173913 - L2 LINE L2 -1 3312 3262 1481 235 7 0 chr17 8264694 8265000 -77173480 - AluJo SINE Alu -4 308 1 338 263 183 0 chr17 8265024 8265161 -77173319 + L2 LINE L2 3151 3312 -1 2226 114 0 22 chr17 8266329 8266646 -77171834 + AluSx SINE Alu 1 310 -2 218 280 0 0 chr17 8266725 8266775 -77171705 - L2 LINE L2 -3 3310 3261 434 266 50 50 chr17 8266981 8267180 -77171300 + L2 LINE L2 3114 3312 -1 383 0 21 0 chr17 8267225 8267272 -77171208 + (TG)n Simple_repeat Simple_repeat 2 49 0 2336 110 0 0 chr17 8267273 8267573 -77170907 - AluSg SINE Alu -10 300 1 2250 97 14 0 chr17 8267593 8267883 -77170597 - AluY SINE Alu -17 294 1 26 64 0 0 chr17 8267883 8267930 -77170550 + AT_rich Low_complexity Low_complexity 1 47 0 415 302 93 80 chr17 8268181 8268621 -77169859 - L2 LINE L2 -1 3271 2826 461 236 34 61 chr17 8270294 8270442 -77168038 + MIR SINE MIR 103 246 -16 538 283 71 49 chr17 8270460 8270686 -77167794 + MIR SINE MIR 2 232 -30 7172 122 23 60 chr17 8270686 8270788 -77167692 - HSMAR2 DNA Mariner 0 1302 1198 1873 140 49 11 chr17 8270788 8271074 -77167406 - AluSx SINE Alu -15 297 1 7172 122 23 60 chr17 8271074 8271216 -77167264 - HSMAR2 DNA Mariner -104 1198 1052 398 75 15 0 chr17 8271216 8271283 -77167197 + (TA)n Simple_repeat Simple_repeat 2 69 0 7172 122 23 60 chr17 8271283 8271308 -77167172 - HSMAR2 DNA Mariner -250 1052 1028 2498 59 0 0 chr17 8271308 8271595 -77166885 - AluY SINE Alu -24 287 1 7172 122 23 60 chr17 8271595 8272593 -77165887 - HSMAR2 DNA Mariner -274 1028 81 850 172 0 8 chr17 8272593 8272727 -77165753 - FLAM_C SINE Alu 0 133 1 7172 122 23 60 chr17 8272727 8272782 -77165698 - HSMAR2 DNA Mariner -1221 81 26 2540 28 7 0 chr17 8273176 8273459 -77165021 + AluSq SINE Alu 1 312 0 244 0 0 0 chr17 8273459 8273486 -77164994 + (CAAA)n Simple_repeat Simple_repeat 2 88 0 372 307 154 36 chr17 8273669 8273975 -77164505 - L2 LINE L2 0 3313 2972 23 0 0 0 chr17 8274536 8274559 -77163921 + GC_rich Low_complexity Low_complexity 1 23 0 26 30 0 0 chr17 8275609 8275642 -77162838 + AT_rich Low_complexity Low_complexity 1 33 0 22 0 0 0 chr17 8275738 8275760 -77162720 + AT_rich Low_complexity Low_complexity 1 22 0 2202 82 7 0 chr17 8276351 8276643 -77161837 - AluSg SINE Alu -16 294 1 501 268 80 74 chr17 8276848 8276900 -77161580 - MARNA DNA Mariner -201 385 335 1713 176 3 3 chr17 8276900 8277202 -77161278 - AluJb SINE Alu -10 302 1 501 268 80 74 chr17 8277202 8277312 -77161168 - MARNA DNA Mariner -251 335 227 2294 73 3 16 chr17 8277312 8277626 -77160854 - AluY SINE Alu -1 310 1 2058 99 6 41 chr17 8277626 8277940 -77160540 - AluSq SINE Alu -10 303 1 501 268 80 74 chr17 8277940 8278111 -77160369 - MARNA DNA Mariner -358 228 48 848 188 90 106 chr17 8278166 8278421 -77160059 - MIR SINE MIR -10 252 2 2148 107 7 0 chr17 8278622 8278922 -77159558 + AluSg SINE Alu 1 302 -8 273 242 44 0 chr17 8280156 8280247 -77158233 - HAL1 LINE L1 -698 1809 1715 848 128 5 138 chr17 8280804 8280992 -77157488 - FRAM SINE Alu -13 163 1 2318 57 33 10 chr17 8281164 8281465 -77157015 - AluY SINE Alu -3 308 1 206 214 107 71 chr17 8281536 8281620 -77156860 - L2 LINE L2 -5 3308 3222 239 328 121 35 chr17 8281727 8281925 -77156555 - L2 LINE L2 -215 3057 2843 1316 173 191 8 chr17 8283443 8283830 -77154650 - Charlie4a DNA MER1_type -3 505 48 2094 128 0 0 chr17 8285531 8285829 -77152651 - AluSx SINE Alu -14 298 1 535 70 14 0 chr17 8286389 8286460 -77152020 - MER51A LTR ERV1 -284 350 279 * 811 129 0 0 chr17 8286456 8286582 -77151898 - MER51A LTR ERV1 -501 133 18 1434 140 53 4 chr17 8287097 8287325 -77151155 - MER8 DNA MER2_type 0 239 1 2172 97 0 0 chr17 8287379 8287667 -77150813 - AluSg SINE Alu -22 288 1 608 228 16 0 chr17 8287692 8287815 -77150665 - FLAM_C SINE Alu -18 125 1 2691 164 50 2 chr17 8287815 8288296 -77150184 - L1MB2 LINE L1 -43 6128 5625 2280 82 0 20 chr17 8288387 8288690 -77149790 + AluSx SINE Alu 1 297 -15 403 262 162 26 chr17 8289602 8289831 -77148649 - L1ME4a LINE L1 -4 6117 5858 608 147 86 0 chr17 8290271 8290387 -77148093 - MER3 DNA MER1_type 0 209 84 346 19 75 0 chr17 8291056 8291109 -77147371 + CT-rich Low_complexity Low_complexity 2 58 0 2119 126 10 0 chr17 8291116 8291425 -77147055 - AluSq SINE Alu -1 312 1 507 293 61 12 chr17 8291569 8291733 -77146747 - L2 LINE L2 -24 3289 3118 367 224 370 5 chr17 8291744 8291936 -77146544 - MIR SINE MIR 0 262 1 386 293 77 28 chr17 8292013 8292300 -77146180 + L1ME LINE L1 4513 4813 -1333 254 308 94 6 chr17 8292361 8292520 -77145960 + L1ME LINE L1 4901 5073 -1073 367 331 70 6 chr17 8292589 8292746 -77145734 + L1ME LINE L1 5232 5398 -748 586 279 149 30 chr17 8292754 8293055 -77145425 + L1ME LINE L1 5456 5792 -329 2372 62 3 7 chr17 8293792 8294098 -77144382 + AluSq SINE Alu 1 305 -8 239 248 106 26 chr17 8294679 8294792 -77143688 - HAL1 LINE L1 -99 2408 2287 25 51 0 0 chr17 8294795 8294834 -77143646 + AT_rich Low_complexity Low_complexity 1 39 0 2287 101 0 0 chr17 8294880 8295186 -77143294 - AluSx SINE Alu -6 306 1 334 344 78 7 chr17 8295659 8295813 -77142667 - HAL1 LINE L1 -698 1809 1645 210 244 61 17 chr17 8296226 8296341 -77142139 + (TATATG)n Simple_repeat Simple_repeat 5 124 0 349 337 203 11 chr17 8296370 8296848 -77141632 + L2 LINE L2 1772 2341 -973 189 0 0 0 chr17 8296936 8296957 -77141523 + (TG)n Simple_repeat Simple_repeat 2 22 0 1880 148 0 16 chr17 8297108 8297419 -77141061 - AluSx SINE Alu -6 306 1 322 283 28 78 chr17 8299208 8299388 -77139092 - L1ME4a LINE L1 -189 5932 5762 770 109 78 16 chr17 8299802 8299930 -77138550 - AluJo SINE Alu -176 136 1 202 211 0 0 chr17 8301191 8301229 -77137251 + (TG)n Simple_repeat Simple_repeat 2 39 0 308 196 62 52 chr17 8304642 8304739 -77133741 + L1MC4 LINE L1 6608 6705 -1337 527 239 22 50 chr17 8304856 8305036 -77133444 - L1ME4a LINE L1 -206 5915 5741 1941 91 0 0 chr17 8307146 8307398 -77131082 + AluSg SINE Alu 36 287 -23 21 0 0 0 chr17 8308020 8308041 -77130439 + AT_rich Low_complexity Low_complexity 1 21 0 339 89 0 0 chr17 8308048 8308093 -77130387 - HY4 scRNA scRNA -3 90 46 1943 93 30 43 chr17 8308093 8308395 -77130085 - AluSx SINE Alu -14 298 1 344 129 106 129 chr17 8309447 8309532 -77128948 - HsTC2 DNA Tc2 -349 1549 1291 1255 104 6 0 chr17 8309532 8309715 -77128765 - AluSp SINE Alu -7 306 123 271 149 21 0 chr17 8309715 8309762 -77128718 - HsTC2 DNA Tc2 -595 1303 1256 235 176 98 0 chr17 8309763 8309814 -77128666 - HsTC2 DNA Tc2 -1763 135 80 1744 118 7 36 chr17 8310759 8311064 -77127416 + AluSx SINE Alu 1 296 -16 2054 114 3 10 chr17 8311575 8311873 -77126607 - AluSx SINE Alu -16 296 1 491 259 175 0 chr17 8314645 8314788 -77123692 - MER58C DNA MER1_type -29 186 19 467 284 8 8 chr17 8316367 8316494 -77121986 - L2 LINE L2 -7 3306 3180 2081 98 0 3 chr17 8317123 8317419 -77121061 - AluSx SINE Alu -17 295 1 625 257 163 33 chr17 8318969 8319331 -77119149 + L2 LINE L2 2405 2813 -501 397 278 103 8 chr17 8320514 8320640 -77117840 - MIR3 SINE MIR -64 144 7 693 271 50 13 chr17 8321410 8321709 -77116771 + L1MB8 LINE L1 2788 3097 -3049 513 263 80 6 chr17 8321754 8321929 -77116551 - L1MEd LINE L1 -5900 219 32 407 218 228 0 chr17 8322714 8322815 -77115665 - FLAM_C SINE Alu -9 124 1 313 188 43 29 chr17 8322840 8322909 -77115571 - L1ME4a LINE L1 0 6121 6052 3257 195 57 62 chr17 8322915 8323852 -77114628 + L1MB8 LINE L1 3689 4620 -1526 239 164 104 0 chr17 8323892 8323959 -77114521 + L1MB8 LINE L1 5229 5302 -844 3831 173 35 20 chr17 8323965 8324744 -77113736 + L1MB8 LINE L1 5389 6178 0 463 214 92 0 chr17 8324816 8324914 -77113566 + AluJb SINE Alu 199 305 -7 315 0 0 0 chr17 8324931 8324966 -77113514 + (A)n Simple_repeat Simple_repeat 1 35 0 242 159 45 102 chr17 8325187 8325275 -77113205 - L1ME LINE L1 -372 5749 5667 1504 229 28 30 chr17 8325641 8326068 -77112412 + L1MB8 LINE L1 5753 6178 0 331 247 93 41 chr17 8326141 8326238 -77112242 + FRAM SINE Alu 64 165 -1 318 303 81 66 chr17 8326260 8326458 -77112022 - L1ME4a LINE L1 -49 6072 5872 285 150 46 100 chr17 8326502 8326599 -77111881 - L1ME4a LINE L1 -372 5749 5667 1627 173 198 29 chr17 8328600 8329080 -77109400 + MLT1F1 LTR MaLR 5 565 -2 2126 108 0 0 chr17 8329132 8329419 -77109061 + AluSx SINE Alu 1 287 -25 342 0 0 0 chr17 8329419 8329457 -77109023 + (CA)n Simple_repeat Simple_repeat 2 39 0 23 0 0 0 chr17 8329879 8329902 -77108578 + AT_rich Low_complexity Low_complexity 1 23 0 292 330 51 0 chr17 8331274 8331429 -77107051 - MIR SINE MIR -65 143 16 200 233 0 0 chr17 8332329 8332372 -77106108 + T-rich Low_complexity Low_complexity 1 43 0 1860 126 56 0 chr17 8332788 8333073 -77105407 + AluSx SINE Alu 1 301 -11 229 250 62 0 chr17 8334266 8334330 -77104150 + L2 LINE L2 3204 3271 -1 2103 89 7 3 chr17 8335426 8335719 -77102761 - AluSg SINE Alu -16 294 1 22 0 0 0 chr17 8335793 8335815 -77102665 + AT_rich Low_complexity Low_complexity 1 22 0 221 331 29 29 chr17 8336085 8336224 -77102256 + MIR SINE MIR 6 144 -118 2945 192 22 0 chr17 8336424 8336961 -77101519 + MER68 LTR ERV1 14 562 0 505 199 50 71 chr17 8337096 8337168 -77101312 - MER2 DNA MER2_type 0 345 276 2463 74 0 0 chr17 8337168 8337478 -77101002 + AluY SINE Alu 1 310 -1 505 199 50 71 chr17 8337478 8337546 -77100934 - MER2 DNA MER2_type -69 276 208 549 270 29 64 chr17 8337691 8337866 -77100614 - L1ME LINE L1 -397 5724 5555 2194 98 0 3 chr17 8337866 8338173 -77100307 + AluY SINE Alu 1 306 -5 549 270 29 64 chr17 8338173 8338201 -77100279 - L1ME LINE L1 -566 5555 5528 245 304 0 0 chr17 8338854 8338910 -77099570 + L2 LINE L2 3258 3313 0 810 289 44 8 chr17 8339206 8339455 -77099025 + MIR SINE MIR 4 261 -1 861 191 51 0 chr17 8340458 8340615 -77097865 + AluJb SINE Alu 144 308 -4 225 0 0 0 chr17 8341781 8341806 -77096674 + (TG)n Simple_repeat Simple_repeat 2 26 0 280 210 16 0 chr17 8341842 8341904 -77096576 - L3b LINE CR1 -350 1233 1171 2367 73 3 3 chr17 8342301 8342614 -77095866 + AluSp SINE Alu 1 313 0 227 250 42 108 chr17 8344361 8344481 -77093999 - MIR SINE MIR -97 111 12 2082 116 7 0 chr17 8344999 8345300 -77093180 + AluSx SINE Alu 1 303 -9 2202 107 3 3 chr17 8346990 8347300 -77091180 + AluSq SINE Alu 1 310 -3 591 200 25 0 chr17 8347347 8347467 -77091013 - AluJo/FRAM SINE Alu -14 298 176 1393 161 17 0 chr17 8347467 8347703 -77090777 - AluJo SINE Alu -72 240 1 269 284 71 43 chr17 8348079 8348113 -77090367 + L2 LINE L2 3125 3157 -115 3099 169 30 40 chr17 8348113 8348721 -77089759 + MER7C DNA MER2_type 1 602 0 269 284 71 43 chr17 8348721 8348827 -77089653 + L2 LINE L2 3157 3269 -3 21 0 0 0 chr17 8349051 8349072 -77089408 + AT_rich Low_complexity Low_complexity 1 21 0 311 288 121 44 chr17 8349312 8349341 -77089139 + L1ME4a LINE L1 5409 5434 -736 1887 78 0 16 chr17 8349341 8349599 -77088881 - AluY SINE Alu -14 297 44 311 288 121 44 chr17 8349599 8349818 -77088662 + L1ME4a LINE L1 5434 5683 -487 352 285 139 7 chr17 8349828 8349972 -77088508 + L1ME4a LINE L1 5710 5872 -249 609 150 0 9 chr17 8350243 8350316 -77088164 + L1MA2 LINE L1 6193 6266 -38 444 82 0 0 chr17 8350316 8350377 -77088103 + (TA)n Simple_repeat Simple_repeat 2 62 0 609 150 0 9 chr17 8350377 8350416 -77088064 + L1MA2 LINE L1 6266 6304 0 399 115 16 0 chr17 8350425 8350486 -77087994 + U7 snRNA snRNA 1 62 -1 2337 87 3 0 chr17 8350538 8350850 -77087630 + AluSq SINE Alu 1 313 0 782 228 14 27 chr17 8350993 8351212 -77087268 - L1MC5 LINE L1 -49 7912 7697 206 341 112 28 chr17 8354263 8354442 -77084038 + L2 LINE L2 3078 3271 -1 2280 93 0 3 chr17 8354835 8355145 -77083335 - AluSx SINE Alu -3 309 1 2388 56 0 10 chr17 8356158 8356461 -77082019 + AluY SINE Alu 1 300 -11 229 337 27 53 chr17 8356841 8357028 -77081452 + L2 LINE L2 2508 2689 -625 364 332 131 9 chr17 8357088 8357317 -77081163 + L2 LINE L2 2829 3085 -228 225 0 0 0 chr17 8357325 8357350 -77081130 + (TG)n Simple_repeat Simple_repeat 1 25 0 396 0 0 0 chr17 8357404 8357448 -77081032 + (TG)n Simple_repeat Simple_repeat 2 45 0 1753 154 0 3 chr17 8357448 8357733 -77080747 - AluJb SINE Alu -28 284 1 406 261 0 0 chr17 8358721 8358809 -77079671 + L1ME3 LINE L1 6075 6162 0 347 256 122 12 chr17 8359348 8359512 -77078968 + L1ME4a LINE L1 5936 6117 -4 2011 87 11 3 chr17 8359537 8359824 -77078656 + AluY SINE Alu 21 309 -2 230 299 112 10 chr17 8361559 8361701 -77076779 - MIR SINE MIR -36 226 59 200 322 58 11 chr17 8362562 8362649 -77075831 + L2 LINE L2 3223 3313 0 652 314 79 48 chr17 8362911 8363369 -77075111 - L2 LINE L2 -620 2694 2223 2249 103 0 28 chr17 8363458 8363779 -77074701 + AluSx SINE Alu 1 312 0 356 267 50 10 chr17 8364195 8364296 -77074184 + MIR SINE MIR 71 175 -87 1421 176 9 46 chr17 8364603 8364927 -77073553 + AluSx SINE Alu 1 312 0 363 250 77 10 chr17 8365341 8365445 -77073035 + MIR SINE MIR 71 181 -81 217 355 18 9 chr17 8365563 8365673 -77072807 + L2 LINE L2 2941 3051 -221 237 273 91 0 chr17 8365904 8365959 -77072521 + L2 LINE L2 3249 3308 -5 2193 107 0 0 chr17 8366236 8366536 -77071944 - AluSg SINE Alu -10 300 1 187 255 43 0 chr17 8367416 8367463 -77071017 + L2 LINE L2 3202 3250 -22 271 264 0 14 chr17 8369722 8369794 -77068686 - L2 LINE L2 -49 3223 3153 965 96 0 22 chr17 8372000 8372136 -77066344 - FLAM_C SINE Alu 0 133 1 239 281 0 0 chr17 8374005 8374062 -77064418 + MIR SINE MIR 206 262 0 2112 88 0 0 chr17 8376996 8377259 -77061221 + AluSg SINE Alu 33 295 -15 1107 183 18 9 chr17 8377263 8377487 -77060993 + L1MB7 LINE L1 5940 6165 -19 2269 105 0 13 chr17 8378640 8378955 -77059525 - AluSq SINE Alu -2 311 1 1730 197 53 26 chr17 8379280 8379697 -77058783 + MSTC LTR MaLR 1 428 0 1790 185 7 3 chr17 8380036 8380334 -77058146 - AluJo SINE Alu -13 299 1 2062 135 0 16 chr17 8380437 8380740 -77057740 - AluSx SINE Alu -14 298 1 204 231 41 99 chr17 8383185 8383306 -77055174 + L2 LINE L2 3137 3250 -22 226 283 17 0 chr17 8383752 8383812 -77054668 + L2 LINE L2 3168 3228 -44 2318 82 14 0 chr17 8383926 8384217 -77054263 - AluSg1 SINE Alu -14 295 1 484 255 31 46 chr17 8384463 8384659 -77053821 - L1MC4a LINE L1 -1926 5882 5690 458 346 42 4 chr17 8384689 8384929 -77053551 - L1MC4a LINE L1 -1610 4536 4288 356 285 242 29 chr17 8385411 8385853 -77052627 + L2 LINE L2 2781 3312 -1 2295 105 0 0 chr17 8386508 8386804 -77051676 - AluSx SINE Alu -16 296 1 1912 149 23 7 chr17 8387353 8387654 -77050826 - 7SLRNA srpRNA srpRNA -14 306 1 411 89 65 8 chr17 8388162 8388285 -77050195 + (TA)n Simple_repeat Simple_repeat 2 131 0 420 216 52 45 chr17 8388334 8388468 -77050012 + Charlie8 DNA MER1_type 87 221 -2196 210 37 0 0 chr17 8390141 8390168 -77048312 + (TCTCCC)n Simple_repeat Simple_repeat 3 29 0 6926 66 17 6 chr17 8390168 8391597 -77046883 + SVA Other Other 53 1380 -6 25 0 0 0 chr17 8391597 8391622 -77046858 + AT_rich Low_complexity Low_complexity 1 25 0 24 32 0 0 chr17 8392242 8392273 -77046207 + AT_rich Low_complexity Low_complexity 1 31 0 29 28 0 0 chr17 8392609 8392645 -77045835 + AT_rich Low_complexity Low_complexity 1 36 0 262 345 84 28 chr17 8392980 8393122 -77045358 - MIR SINE MIR -112 150 1 21 36 0 0 chr17 8394675 8394703 -77043777 + AT_rich Low_complexity Low_complexity 1 28 0 320 338 108 33 chr17 8394807 8395112 -77043368 + L1ME1 LINE L1 3364 3691 -2455 2194 104 0 10 chr17 8395114 8395413 -77043067 + AluSx SINE Alu 1 296 -16 971 73 0 0 chr17 8395456 8395579 -77042901 + AluSc SINE Alu 187 309 0 1846 223 40 29 chr17 8395712 8396263 -77042217 + L1ME1 LINE L1 4611 5167 -979 2489 234 50 18 chr17 8396372 8397095 -77041385 + L1ME1 LINE L1 5397 6142 -24 298 200 0 0 chr17 8397185 8397240 -77041240 + U6 snRNA snRNA 48 102 -5 194 79 0 26 chr17 8398820 8398858 -77039622 + (CAAAAA)n Simple_repeat Simple_repeat 2 38 0 4523 182 74 19 chr17 8399012 8400149 -77038331 - Looper DNA T2_type -358 1200 1 237 196 0 0 chr17 8404222 8404273 -77034207 + A-rich Low_complexity Low_complexity 3 53 0 294 317 33 17 chr17 8404908 8405028 -77033452 + L2 LINE L2 3188 3309 -4 329 254 98 16 chr17 8405069 8405191 -77033289 - L2 LINE L2 -77 3236 3105 371 318 31 87 chr17 8405252 8405541 -77032939 - L2 LINE L2 -749 2565 2293 212 189 0 0 chr17 8405542 8405579 -77032901 + L2 LINE L2 3259 3295 -18 873 200 51 33 chr17 8406303 8406518 -77031962 - MER20 DNA MER1_type 0 219 1 1758 214 81 36 chr17 8406612 8407107 -77031373 + MLT1F LTR MaLR 26 542 0 1404 159 12 4 chr17 8407794 8408046 -77030434 + MLT1B LTR MaLR 1 254 -136 1150 247 47 14 chr17 8408178 8408538 -77029942 + MER87 LTR ERV1 168 539 -2 793 141 7 14 chr17 8408539 8408681 -77029799 + MLT1B LTR MaLR 250 390 0 295 211 0 0 chr17 8409260 8409312 -77029168 + AluJ/monomer SINE Alu 1 52 -250 2332 204 81 22 chr17 8409457 8410577 -77027903 + L1ME1 LINE L1 4330 5742 -424 1822 129 37 55 chr17 8410577 8410925 -77027555 + MER2 DNA MER2_type 3 344 0 2332 204 81 22 chr17 8410925 8411144 -77027336 + L1ME1 LINE L1 5742 5947 -219 2421 87 7 0 chr17 8411366 8411676 -77026804 - AluSp SINE Alu -1 312 1 2136 104 14 10 chr17 8412100 8412397 -77026083 - AluSx SINE Alu -14 298 1 216 214 0 0 chr17 8412576 8412632 -77025848 + GA-rich Low_complexity Low_complexity 4 59 0 322 229 43 0 chr17 8413059 8413129 -77025351 + HAL1 LINE L1 2030 2102 -405 343 116 0 29 chr17 8413237 8413306 -77025174 + (GAAA)n Simple_repeat Simple_repeat 2 68 0 211 193 0 35 chr17 8413324 8413381 -77025099 + (TTTA)n Simple_repeat Simple_repeat 1 55 0 2114 107 7 23 chr17 8413566 8413866 -77024614 - AluSg SINE Alu -15 295 1 1171 77 0 6 chr17 8413929 8414085 -77024395 - AluY SINE Alu -12 299 145 398 288 131 76 chr17 8414520 8414659 -77023821 - L1M4 LINE L1 -3060 3086 2956 2100 141 0 0 chr17 8414659 8414956 -77023524 - AluJb SINE Alu -15 297 1 398 288 131 76 chr17 8414956 8415435 -77023045 - L1M4 LINE L1 -3190 2956 2434 323 188 62 0 chr17 8415439 8415535 -77022945 + L2 LINE L2 1301 1402 -1912 484 342 131 47 chr17 8415874 8416937 -77021543 - L2 LINE L2 -1908 1406 255 378 60 0 0 chr17 8417676 8417726 -77020754 - L2 LINE L2 0 3313 3264 233 309 29 91 chr17 8417813 8417928 -77020552 + L3 LINE CR1 636 738 -839 2260 93 0 10 chr17 8417928 8418229 -77020251 - AluY SINE Alu -13 298 1 233 309 29 91 chr17 8418229 8418288 -77020192 + L3 LINE CR1 738 799 -778 1155 139 0 48 chr17 8418566 8418775 -77019705 + AluJo SINE Alu 98 296 -16 287 329 100 7 chr17 8418871 8419011 -77019469 - MIR SINE MIR -18 244 92 284 200 78 0 chr17 8419043 8419133 -77019347 + Charlie5 DNA MER1_type 2508 2604 -8 1972 48 0 0 chr17 8420712 8420940 -77017540 - AluY SINE Alu -6 305 78 1745 102 91 18 chr17 8421044 8421329 -77017151 + AluY SINE Alu 1 306 -5 291 28 0 0 chr17 8421772 8421808 -77016672 + (TG)n Simple_repeat Simple_repeat 1 36 0 234 0 0 0 chr17 8421807 8421833 -77016647 + (GA)n Simple_repeat Simple_repeat 1 26 0 * 225 240 27 67 chr17 8421877 8421952 -77016528 + L2 LINE L2 3201 3272 0 1168 82 38 43 chr17 8421968 8422152 -77016328 - MER30B DNA MER1_type -4 186 4 3353 162 59 12 chr17 8423402 8424081 -77014399 + L1MB8 LINE L1 5451 6161 -17 888 210 25 0 chr17 8425515 8425677 -77012803 - FRAM SINE Alu 0 166 1 28 0 0 0 chr17 8425679 8425707 -77012773 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr17 8425958 8425979 -77012501 + AT_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr17 8426039 8426069 -77012411 + AT_rich Low_complexity Low_complexity 1 30 0 26 50 0 0 chr17 8426965 8427005 -77011475 + AT_rich Low_complexity Low_complexity 1 40 0 2082 148 0 0 chr17 8427070 8427367 -77011113 - AluSx SINE Alu -15 297 1 1857 141 4 4 chr17 8427767 8428036 -77010444 - AluSx SINE Alu 0 312 44 1607 176 31 7 chr17 8428540 8428829 -77009651 + AluJo SINE Alu 1 296 -16 299 269 59 17 chr17 8428961 8429080 -77009400 + MIR3 SINE MIR 71 194 -14 1168 125 0 0 chr17 8429513 8429673 -77008807 + AluSg/x SINE Alu 134 293 -19 347 325 81 61 chr17 8430256 8430755 -77007725 - L2 LINE L2 0 3272 2761 207 217 67 0 chr17 8431183 8431243 -77007237 + MIR SINE MIR 114 177 -85 470 257 193 23 chr17 8431366 8431584 -77006896 + MIR SINE MIR 1 255 -7 194 125 0 25 chr17 8431600 8431640 -77006840 + (ATG)n Simple_repeat Simple_repeat 1 39 0 243 138 36 6 chr17 8432954 8433010 -77005470 - LTR29 LTR ERV1 -66 556 513 1477 201 95 22 chr17 8433884 8434293 -77004187 - LTR56 LTR ERV1 0 445 7 2274 99 3 0 chr17 8434367 8434678 -77003802 - AluSp SINE Alu 0 312 1 215 170 21 0 chr17 8434702 8434749 -77003731 + (TATATG)n Simple_repeat Simple_repeat 6 53 0 305 311 0 0 chr17 8434757 8434847 -77003633 + L1MC4 LINE L1 6614 6703 -1339 207 0 0 0 chr17 8434847 8434870 -77003610 + (TA)n Simple_repeat Simple_repeat 1 23 0 319 96 164 45 chr17 8434880 8434977 -77003503 - LTR48B LTR ERV1 -38 749 499 317 225 110 38 chr17 8435236 8435402 -77003078 + L1ME2 LINE L1 5978 6154 -10 291 186 108 0 chr17 8435838 8435940 -77002540 + MER34 LTR ERV1 425 537 -5 329 275 75 0 chr17 8435973 8436093 -77002387 + L1MC4 LINE L1 7913 8041 -1 440 231 146 31 chr17 8436780 8436910 -77001570 + MLT1H LTR MaLR 405 549 0 961 324 109 31 chr17 8436968 8438263 -77000217 + L2 LINE L2 1328 2723 -591 361 314 35 30 chr17 8438948 8439117 -76999363 + MER5A DNA MER1_type 18 187 -2 402 236 14 56 chr17 8439430 8439574 -76998906 - MIR SINE MIR -108 154 17 2069 141 3 0 chr17 8439868 8440173 -76998307 - AluJb SINE Alu -6 306 1 2614 63 0 0 chr17 8440435 8440738 -76997742 - AluY SINE Alu -8 303 1 196 275 100 12 chr17 8440958 8441038 -76997442 + MIR SINE MIR 54 140 -68 3310 236 45 27 chr17 8441767 8442493 -76995987 + L1M4 LINE L1 3029 3782 -2364 459 0 0 0 chr17 8442493 8442544 -76995936 + (TA)n Simple_repeat Simple_repeat 1 51 0 3310 236 45 27 chr17 8442544 8442886 -76995594 + L1M4 LINE L1 3782 4116 -2030 1949 145 0 22 chr17 8443458 8443743 -76994737 + AluJo SINE Alu 1 280 -32 329 0 0 24 chr17 8443743 8443785 -76994695 + (TAA)n Simple_repeat Simple_repeat 2 42 0 1949 145 0 22 chr17 8443785 8443817 -76994663 + AluJo SINE Alu 280 311 -1 274 257 18 55 chr17 8444205 8444314 -76994166 + L1ME4a LINE L1 5847 5951 -170 194 311 136 0 chr17 8444389 8444492 -76993988 + L2 LINE L2 3181 3297 -16 1107 175 28 0 chr17 8444947 8445158 -76993322 - MIR SINE MIR -23 239 23 207 69 0 0 chr17 8446507 8446536 -76991944 + (CACCC)n Simple_repeat Simple_repeat 3 31 0 408 254 129 40 chr17 8447692 8447893 -76990587 + MIR SINE MIR 38 256 -6 271 178 0 0 chr17 8447960 8448005 -76990475 - tRNA-Thr-ACT tRNA tRNA -32 45 1 601 258 107 24 chr17 8448011 8448302 -76990178 - L3 LINE CR1 -701 876 562 32 0 0 0 chr17 8449675 8449707 -76988773 + AT_rich Low_complexity Low_complexity 1 32 0 292 133 82 0 chr17 8449998 8450059 -76988421 - LTR41 LTR ERVL -2 793 712 185 289 13 40 chr17 8450165 8450241 -76988239 + MIR SINE MIR 109 182 -80 2073 165 36 65 chr17 8450290 8450433 -76988047 + Charlie1 DNA MER1_type 2207 2353 -408 2053 122 0 4 chr17 8450433 8450712 -76987768 + AluSg SINE Alu 1 278 -32 261 0 0 0 chr17 8450712 8450741 -76987739 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 2073 165 36 65 chr17 8450741 8451116 -76987364 + Charlie1 DNA MER1_type 2351 2711 -50 185 357 12 0 chr17 8453683 8453767 -76984713 + L2 LINE L2 2898 2982 -290 2505 50 3 3 chr17 8453780 8454080 -76984400 - AluY SINE Alu -11 300 1 227 279 23 23 chr17 8454939 8455025 -76983455 + L1MC5 LINE L1 7132 7217 -744 189 0 0 0 chr17 8455241 8455262 -76983218 + (A)n Simple_repeat Simple_repeat 1 21 0 831 165 0 8 chr17 8455276 8455409 -76983071 + FLAM_C SINE Alu 1 132 -1 25 0 0 0 chr17 8456371 8456396 -76982084 + GC_rich Low_complexity Low_complexity 1 25 0 210 150 0 0 chr17 8456981 8457021 -76981459 + (TTCA)n Simple_repeat Simple_repeat 4 43 0 24 0 0 0 chr17 8457229 8457253 -76981227 + AT_rich Low_complexity Low_complexity 1 24 0 309 151 0 0 chr17 8457894 8457947 -76980533 + (TA)n Simple_repeat Simple_repeat 1 53 0 2268 103 0 10 chr17 8457947 8458258 -76980222 - AluSc SINE Alu -1 308 1 348 98 34 28 chr17 8459082 8459191 -76979289 + L1MB8 LINE L1 5330 5440 -714 2300 105 0 0 chr17 8459195 8459491 -76978989 + AluSx SINE Alu 3 298 -14 185 0 40 0 chr17 8459521 8459546 -76978934 + (CAA)n Simple_repeat Simple_repeat 2 27 0 916 223 0 0 chr17 8459548 8459723 -76978757 + L1MB8 LINE L1 5433 5607 -577 883 116 31 0 chr17 8459766 8459895 -76978585 + AluSq/x SINE Alu 1 133 -179 315 211 157 64 chr17 8459921 8460125 -76978355 + L1MB8 LINE L1 5945 6167 -11 1955 93 12 0 chr17 8460158 8460406 -76978074 + AluSq SINE Alu 48 298 -15 1905 220 66 35 chr17 8460407 8460758 -76977722 + L1MB8 LINE L1 5599 5975 -203 2392 99 0 6 chr17 8460758 8461070 -76977410 + AluSg SINE Alu 1 310 0 1905 220 66 35 chr17 8461070 8461281 -76977199 + L1MB8 LINE L1 5975 6178 0 385 288 144 7 chr17 8461294 8461447 -76977033 + Charlie8 DNA MER1_type 104 277 -2140 2213 124 0 6 chr17 8461454 8461768 -76976712 - AluSx SINE Alu 0 312 1 1744 136 10 14 chr17 8462319 8462613 -76975867 + L1PB2 LINE L1 5858 6150 -1 2131 106 3 7 chr17 8462615 8462907 -76975573 + AluSx SINE Alu 1 291 -21 22 0 0 0 chr17 8462907 8462929 -76975551 + AT_rich Low_complexity Low_complexity 1 22 0 293 311 44 7 chr17 8462993 8463128 -76975352 - L2 LINE L2 -13 3300 3161 2363 80 3 0 chr17 8463442 8463729 -76974751 + AluSc SINE Alu 1 288 -21 441 0 0 0 chr17 8463729 8463778 -76974702 + (TA)n Simple_repeat Simple_repeat 1 49 0 380 313 38 84 chr17 8463791 8464241 -76974239 - L2 LINE L2 -343 2971 2543 1486 168 27 40 chr17 8464512 8464840 -76973640 - MER33 DNA MER1_type 0 324 1 313 242 15 0 chr17 8464876 8464942 -76973538 + L2 LINE L2 3201 3267 -5 785 163 6 0 chr17 8464951 8465129 -76973351 + (TGGA)n Simple_repeat Simple_repeat 2 180 0 456 213 11 6 chr17 8465171 8465345 -76973135 + (TGGA)n Simple_repeat Simple_repeat 4 178 0 482 209 7 85 chr17 8466257 8466340 -76972140 + MIR SINE MIR 81 149 -113 1554 167 3 60 chr17 8466340 8466729 -76971751 + AluJo SINE Alu 1 372 0 482 209 7 85 chr17 8466729 8466797 -76971683 + MIR SINE MIR 149 221 -41 2418 116 31 0 chr17 8467317 8467670 -76970810 + THE1B LTR MaLR 1 364 0 566 254 21 0 chr17 8467706 8467848 -76970632 + MIR SINE MIR 63 207 -55 1885 172 6 13 chr17 8467889 8468203 -76970277 - AluJo SINE Alu 0 312 1 1755 206 78 64 chr17 8468225 8468867 -76969613 + L1MC5 LINE L1 7308 7958 -3 1341 163 107 24 chr17 8469152 8469404 -76969076 + AluJb SINE Alu 1 273 -39 2329 143 30 21 chr17 8469866 8470293 -76968187 - L1MA6 LINE L1 0 6300 5870 2358 84 0 0 chr17 8470522 8470806 -76967674 - AluSx SINE Alu -24 288 5 1825 134 4 7 chr17 8471552 8471821 -76966659 - AluSx SINE Alu -44 268 1 2894 77 55 10 chr17 8472304 8472720 -76965760 + MLT2A1 LTR ERVL 1 435 -9 272 75 0 25 chr17 8472750 8472790 -76965690 + MLT2A2 LTR ERVL 415 453 0 2228 84 13 27 chr17 8473006 8473305 -76965175 - AluY SINE Alu -16 295 1 317 243 139 35 chr17 8473575 8473748 -76964732 - MIR3 SINE MIR 0 208 18 191 300 0 33 chr17 8473773 8473833 -76964647 - L2 LINE L2 -20 3293 3236 2291 98 10 0 chr17 8474125 8474422 -76964058 + AluSp SINE Alu 1 300 -13 276 248 118 34 chr17 8474514 8474700 -76963780 + MIR SINE MIR 14 260 -2 427 240 19 0 chr17 8475398 8475502 -76962978 - MIR SINE MIR 0 262 157 787 204 127 30 chr17 8475505 8475792 -76962688 - MLT1A2 LTR MaLR 0 374 1 2145 112 10 10 chr17 8475971 8476276 -76962204 + AluSq SINE Alu 1 305 -8 222 37 0 0 chr17 8476287 8476314 -76962166 + (A)n Simple_repeat Simple_repeat 1 27 0 711 232 34 58 chr17 8476993 8477286 -76961194 + L1MC5 LINE L1 5257 5542 -2266 1491 102 0 0 chr17 8477348 8477553 -76960927 - AluSg/x SINE Alu -4 306 102 698 260 29 10 chr17 8477553 8477757 -76960723 - Zaphod DNA AcHobo -3823 208 1 3227 215 93 81 chr17 8477760 8477836 -76960644 + L1MC5 LINE L1 5846 5920 -2041 1790 166 84 0 chr17 8477836 8478156 -76960324 + MER7A DNA MER2_type 1 345 -1 3227 215 93 81 chr17 8478156 8478783 -76959697 + L1MC5 LINE L1 5920 6538 -1423 2422 73 0 0 chr17 8478783 8479084 -76959396 + AluSg SINE Alu 1 301 -9 3227 215 93 81 chr17 8479084 8479963 -76958517 + L1MC5 LINE L1 6538 7405 -556 2036 125 0 10 chr17 8479963 8480266 -76958214 + AluSx SINE Alu 1 300 -12 1905 152 0 29 chr17 8480269 8480617 -76957863 + MER44D DNA MER2_type 1 608 -1 3227 215 93 81 chr17 8480617 8480834 -76957646 + L1MC5 LINE L1 7406 7692 -269 1365 191 0 0 chr17 8480835 8481076 -76957404 - AluJb SINE Alu -14 298 58 594 147 96 6 chr17 8481086 8481242 -76957238 + L1MC5 LINE L1 7681 7850 -111 668 183 15 23 chr17 8481568 8481699 -76956781 + L2 LINE L2 3182 3311 -2 1751 234 97 21 chr17 8481772 8482222 -76956258 + MLT1H1 LTR MaLR 1 496 -59 1668 159 14 3 chr17 8482222 8482518 -76955962 + AluJo SINE Alu 1 299 -13 1751 234 97 21 chr17 8482518 8482583 -76955897 + MLT1H1 LTR MaLR 496 555 0 257 339 49 81 chr17 8482879 8483170 -76955310 + L2 LINE L2 2935 3215 -57 2216 92 0 7 chr17 8483170 8483473 -76955007 + AluY SINE Alu 1 301 -10 257 339 49 81 chr17 8483473 8483526 -76954954 + L2 LINE L2 3215 3268 -4 268 164 29 173 chr17 8483606 8483710 -76954770 + MIR SINE MIR 104 192 -70 1382 266 64 37 chr17 8484088 8484602 -76953878 - MLT1K LTR MaLR -51 537 10 527 233 52 70 chr17 8485020 8485090 -76953390 + MLT1K LTR MaLR 420 490 -98 2271 184 22 11 chr17 8485090 8485552 -76952928 + MLT1C LTR MaLR 1 467 0 527 233 52 70 chr17 8485552 8485653 -76952827 + MLT1K LTR MaLR 490 588 0 201 283 75 0 chr17 8485662 8485715 -76952765 - L2 LINE L2 -47 3225 3169 1093 98 11 6 chr17 8486009 8486183 -76952297 + (TTCC)n Simple_repeat Simple_repeat 2 176 0 510 118 29 10 chr17 8486195 8486297 -76952183 + CT-rich Low_complexity Low_complexity 4 107 0 228 125 0 0 chr17 8486304 8486336 -76952144 + (TC)n Simple_repeat Simple_repeat 1 32 0 1828 155 3 0 chr17 8486336 8486627 -76951853 - AluJb SINE Alu -20 292 1 214 358 74 34 chr17 8486692 8486818 -76951662 + L2 LINE L2 2866 3002 -270 2018 200 40 15 chr17 8486818 8487274 -76951206 - MLT1C LTR MaLR 0 467 1 214 358 74 34 chr17 8487274 8487323 -76951157 + L2 LINE L2 3002 3048 -224 190 317 17 0 chr17 8487424 8487484 -76950996 - MIR SINE MIR -180 82 22 1625 171 13 29 chr17 8487518 8487834 -76950646 + AluJo SINE Alu 1 311 -1 515 146 21 0 chr17 8487834 8487930 -76950550 + GA-rich Low_complexity Low_complexity 2 99 0 964 305 57 9 chr17 8488979 8489297 -76949183 + MLT1I LTR MaLR 59 391 -18 592 285 28 0 chr17 8489301 8489445 -76949035 - MIR SINE MIR -102 160 13 2122 92 27 0 chr17 8489627 8489921 -76948559 + AluSg SINE Alu 1 302 -8 2265 86 0 0 chr17 8490399 8490691 -76947789 - AluSc SINE Alu -16 293 2 474 291 47 0 chr17 8490785 8490799 -76947681 - L1MA10 LINE L1 0 6334 6321 468 305 30 11 chr17 8490799 8491055 -76947425 - L1ME1 LINE L1 -5 6161 5850 2155 84 17 7 chr17 8491633 8491930 -76946550 + AluSg SINE Alu 1 300 -10 908 98 13 173 chr17 8492395 8492493 -76945987 + MER53 DNA DNA 1 45 -144 2174 98 0 0 chr17 8492493 8492779 -76945701 - AluSg SINE Alu -24 286 1 908 98 13 173 chr17 8492779 8492905 -76945575 + MER53 DNA DNA 44 189 0 3483 158 42 56 chr17 8493244 8493932 -76944548 - L1MA7 LINE L1 0 6291 5614 2241 85 13 0 chr17 8493932 8494237 -76944243 - AluSp SINE Alu -4 309 1 3483 158 42 56 chr17 8494237 8494310 -76944170 - L1MA7 LINE L1 -677 5614 5541 420 134 0 0 chr17 8495262 8495344 -76943136 - AluSc SINE Alu 0 309 228 261 0 0 0 chr17 8495363 8495392 -76943088 + (TA)n Simple_repeat Simple_repeat 1 29 0 1939 107 41 0 chr17 8495403 8495693 -76942787 + AluSx SINE Alu 1 302 -10 1324 83 12 132 chr17 8495707 8495757 -76942723 - Tigger2a DNA MER2_type -2465 253 199 668 241 80 0 chr17 8495757 8495919 -76942561 + FAM SINE Alu 1 175 0 1324 83 12 132 chr17 8495919 8496146 -76942334 - Tigger2a DNA MER2_type -2519 199 1 2050 71 45 0 chr17 8496511 8496807 -76941673 - AluY SINE Alu 0 308 1 2609 168 86 19 chr17 8496860 8497385 -76941095 + L1MB3 LINE L1 5617 6176 -7 317 273 68 30 chr17 8497438 8497473 -76941007 - MER103 DNA DNA -11 155 123 288 0 0 0 chr17 8497473 8497505 -76940975 + (CA)n Simple_repeat Simple_repeat 2 33 0 317 273 68 30 chr17 8497505 8497601 -76940879 - MER103 DNA DNA -43 123 19 323 222 26 104 chr17 8497804 8497949 -76940531 - MIR SINE MIR -62 146 30 337 340 47 20 chr17 8498242 8498392 -76940088 - MER5A DNA MER1_type -24 165 1 218 330 18 46 chr17 8498401 8498510 -76939970 - MIR3 SINE MIR -27 181 76 327 257 102 136 chr17 8499366 8499572 -76938908 + MIR SINE MIR 20 218 -44 1313 142 0 5 chr17 8499812 8500023 -76938457 - AluJb SINE Alu -19 293 84 239 95 48 0 chr17 8500056 8500098 -76938382 + T-rich Low_complexity Low_complexity 4 47 0 1465 139 13 0 chr17 8500108 8500345 -76938135 - AluSg/x SINE Alu 0 310 71 496 246 58 105 chr17 8500371 8500482 -76937998 - L1ME LINE L1 -527 5594 5479 1648 112 164 6 chr17 8500482 8500794 -76937686 - MER46B DNA MER2_type 0 236 1 2021 107 52 0 chr17 8500803 8501094 -76937386 - AluSx SINE Alu -6 306 1 496 246 58 105 chr17 8501094 8501229 -76937251 - L1ME LINE L1 -650 5471 5354 2103 117 3 0 chr17 8501229 8501529 -76936951 - AluSq SINE Alu -12 301 1 496 246 58 105 chr17 8501529 8501596 -76936884 - L1ME LINE L1 -767 5354 5285 352 292 169 51 chr17 8501629 8501865 -76936615 - L1ME LINE L1 -852 5294 5031 785 193 28 40 chr17 8501920 8502096 -76936384 - MER3 DNA MER1_type -82 127 1 453 371 42 24 chr17 8502160 8502448 -76936032 - L1ME LINE L1 -1215 4931 4639 299 323 96 76 chr17 8502622 8502913 -76935567 + L2 LINE L2 2971 3267 -5 791 220 18 26 chr17 8503365 8503558 -76934922 + MIR SINE MIR 69 257 -5 1526 122 122 7 chr17 8503558 8503828 -76934652 - AluSg SINE Alu -9 301 1 2374 50 10 0 chr17 8505849 8506149 -76932331 - AluY SINE Alu -8 303 1 4999 68 6 6 chr17 8506269 8506915 -76931565 - L1PA7 LINE L1 0 6154 5509 21 36 0 0 chr17 8506959 8506987 -76931493 + AT_rich Low_complexity Low_complexity 1 28 0 1459 144 20 78 chr17 8506987 8507293 -76931187 - AluJo SINE Alu -24 288 1 743 215 151 13 chr17 8507672 8507959 -76930521 + L1MD3 LINE L1 7238 7484 -511 2011 112 0 0 chr17 8507959 8508235 -76930245 + AluSx SINE Alu 6 281 -31 743 215 151 13 chr17 8508235 8508587 -76929893 + L1MD3 LINE L1 7484 7984 -11 1569 53 0 0 chr17 8508754 8508943 -76929537 - AluSc SINE Alu -5 304 116 1823 60 0 4 chr17 8508944 8509178 -76929302 + AluY SINE Alu 79 311 0 2213 63 18 3 chr17 8509474 8509759 -76928721 + AluY SINE Alu 1 289 -22 1996 117 7 13 chr17 8510192 8510491 -76927989 - AluSx SINE Alu -15 297 1 2021 265 11 40 chr17 8510517 8511071 -76927409 - MER115 DNA AcHobo -5 688 151 425 170 9 38 chr17 8511089 8511195 -76927285 + C-rich Low_complexity Low_complexity 5 107 0 849 142 23 20 chr17 8511310 8511666 -76926814 + C-rich Low_complexity Low_complexity 1 357 0 696 316 22 4 chr17 8511760 8512029 -76926451 - L1M4 LINE L1 -2283 3863 3590 300 285 61 79 chr17 8512057 8512271 -76926209 - L1ME4a LINE L1 -12 6109 5900 286 133 56 33 chr17 8512297 8512387 -76926093 + CT-rich Low_complexity Low_complexity 2 93 0 925 146 38 195 chr17 8512389 8512407 -76926073 - AluJb SINE Alu -1 311 292 1903 158 7 0 chr17 8512407 8512717 -76925763 - AluSx SINE Alu 0 312 1 925 146 38 195 chr17 8512717 8513067 -76925413 - AluJb SINE Alu -20 292 1 271 271 54 42 chr17 8513078 8513244 -76925236 - L1ME4a LINE L1 -1926 5882 5715 509 230 54 108 chr17 8513244 8513466 -76925014 + L2 LINE L2 3104 3313 0 359 303 45 84 chr17 8513474 8513727 -76924753 - L1ME4a LINE L1 -421 5700 5439 971 161 6 12 chr17 8513727 8513888 -76924592 + FRAM SINE Alu 4 163 -3 2000 92 4 7 chr17 8513896 8514177 -76924303 + AluSx SINE Alu 1 280 -32 359 303 45 84 chr17 8514177 8514458 -76924022 - L1ME4a LINE L1 -689 5432 5175 2523 56 0 0 chr17 8514602 8514908 -76923572 - AluY SINE Alu -5 306 1 1471 161 80 18 chr17 8515316 8515590 -76922890 - AluJb SINE Alu -10 292 2 25 0 0 0 chr17 8515737 8515762 -76922718 + AT_rich Low_complexity Low_complexity 1 25 0 530 282 29 18 chr17 8515807 8515977 -76922503 + MER5B DNA MER1_type 1 172 -6 540 264 109 33 chr17 8516011 8516379 -76922101 + L1MC5 LINE L1 7371 7766 -195 2305 81 7 0 chr17 8516380 8516688 -76921792 + AluSx SINE Alu 3 312 0 1059 123 12 0 chr17 8516688 8516850 -76921630 + AluSg/x SINE Alu 131 294 -18 293 262 92 14 chr17 8516896 8517037 -76921443 + L1MC4 LINE L1 7891 8042 0 1803 167 0 3 chr17 8517543 8517855 -76920625 + AluJb SINE Alu 1 311 -1 2398 84 6 0 chr17 8518508 8518819 -76919661 - AluSq SINE Alu 0 313 1 469 277 0 0 chr17 8519315 8519427 -76919053 + MIR SINE MIR 48 159 -103 2047 117 0 10 chr17 8519585 8519885 -76918595 + AluSx SINE Alu 3 299 -13 280 266 130 32 chr17 8520093 8520247 -76918233 + MER5B DNA MER1_type 10 178 0 206 170 21 0 chr17 8520551 8520598 -76917882 - L2 LINE L2 -1035 2279 2232 297 0 0 0 chr17 8521966 8521999 -76916481 + (CA)n Simple_repeat Simple_repeat 2 34 0 225 289 109 57 chr17 8522213 8522424 -76916056 - L2 LINE L2 -195 3077 2856 211 256 0 0 chr17 8522551 8522590 -76915890 + (CG)n Simple_repeat Simple_repeat 1 39 0 525 257 46 20 chr17 8523335 8523511 -76914969 - MLT1F LTR MaLR -376 191 1 369 118 0 0 chr17 8523511 8523561 -76914919 + MLT1F LTR MaLR 493 542 0 2094 102 0 0 chr17 8523681 8524014 -76914466 - AluSq SINE Alu 0 333 1 373 284 9 9 chr17 8524634 8524743 -76913737 + L2 LINE L2 3200 3308 -5 423 326 182 16 chr17 8524996 8525484 -76912996 + L2 LINE L2 1616 2184 -1130 1392 129 5 0 chr17 8525502 8525711 -76912769 - AluJb SINE Alu -17 295 86 360 254 161 51 chr17 8525835 8526052 -76912428 + MLT1I LTR MaLR 122 362 -47 195 100 0 0 chr17 8526054 8526084 -76912396 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 714 272 0 0 chr17 8526084 8526257 -76912223 - L1M4 LINE L1 -2463 3683 3511 193 93 0 47 chr17 8526259 8526302 -76912178 + (TTTC)n Simple_repeat Simple_repeat 2 42 0 263 197 0 0 chr17 8526307 8526368 -76912112 - L1MA9 LINE L1 -7 6305 6245 1178 57 0 86 chr17 8526401 8526576 -76911904 - L1PA7 LINE L1 -7 6147 5988 413 186 106 9 chr17 8526577 8526690 -76911790 - L1MA9 LINE L1 -64 6248 6125 * 2108 211 122 34 chr17 8526684 8526885 -76911595 - L1M4 LINE L1 -2614 3532 3350 4712 138 96 59 chr17 8526885 8527869 -76910611 - LTR28 LTR ERV1 0 1020 1 2108 211 122 34 chr17 8527869 8528542 -76909938 - L1M4 LINE L1 -2796 3350 2585 1181 275 119 43 chr17 8528592 8528824 -76909656 + L2 LINE L2 2236 2449 -865 2373 93 17 0 chr17 8528824 8529114 -76909366 - AluSx SINE Alu -17 295 1 1181 275 119 43 chr17 8529114 8529571 -76908909 + L2 LINE L2 2449 2977 -337 2306 99 3 0 chr17 8529620 8529912 -76908568 - AluSq SINE Alu -20 293 1 321 278 0 11 chr17 8529971 8530061 -76908419 - LTR16B LTR ERVL 0 464 376 274 351 8 15 chr17 8530059 8530190 -76908290 - LTR16B LTR ERVL -285 179 50 * 452 261 21 28 chr17 8531016 8531158 -76907322 + MIR SINE MIR 17 157 -105 320 125 0 0 chr17 8531220 8531268 -76907212 - MER103 DNA DNA -66 100 53 436 287 25 25 chr17 8531610 8531767 -76906713 - MIR3 SINE MIR -3 205 49 2614 53 0 0 chr17 8532560 8532860 -76905620 + AluY SINE Alu 1 300 -11 222 257 95 0 chr17 8533347 8533421 -76905059 + MIR SINE MIR 61 141 -121 2247 87 0 68 chr17 8533431 8533752 -76904728 + AluY SINE Alu 1 299 -12 309 345 31 21 chr17 8533876 8534070 -76904410 + L2 LINE L2 2667 2862 -452 2183 160 15 5 chr17 8534074 8534473 -76904007 + MER57A LTR ERV1 1 403 0 211 214 0 0 chr17 8534601 8534643 -76903837 + MIR SINE MIR 70 111 -151 831 292 154 23 chr17 8534655 8535135 -76903345 + MLT1H LTR MaLR 7 549 0 544 236 8 8 chr17 8535138 8535261 -76903219 + MIR SINE MIR 126 248 -14 225 246 82 16 chr17 8535306 8535367 -76903113 + L2 LINE L2 3188 3252 -20 2315 99 7 0 chr17 8535610 8535903 -76902577 + AluSc SINE Alu 1 295 -14 2091 104 57 0 chr17 8536069 8536348 -76902132 - AluSx SINE Alu -17 295 1 346 308 15 23 chr17 8537596 8537729 -76900751 + MIR SINE MIR 129 260 -2 653 191 0 0 chr17 8537763 8537878 -76900602 + FLAM_A SINE Alu 1 115 -18 920 244 122 70 chr17 8538184 8538299 -76900181 - L2 LINE L2 -1 3312 3204 261 0 0 0 chr17 8538299 8538328 -76900152 + (TG)n Simple_repeat Simple_repeat 1 29 0 2288 71 14 0 chr17 8538329 8538611 -76899869 - AluY SINE Alu -25 286 1 920 244 122 70 chr17 8538611 8539037 -76899443 - L2 LINE L2 -108 3205 2736 1046 229 34 38 chr17 8539149 8539442 -76899038 + MLT1A2 LTR MaLR 1 292 -82 302 279 0 0 chr17 8539467 8539546 -76898934 + L1MC4 LINE L1 7822 7900 -142 1655 179 56 24 chr17 8539575 8539950 -76898530 + MLT1B LTR MaLR 1 387 -3 1687 228 63 31 chr17 8539951 8540008 -76898472 - MLT1F1 LTR MaLR -16 551 497 2198 116 3 0 chr17 8540008 8540300 -76898180 - AluSx SINE Alu -19 293 1 1687 228 63 31 chr17 8540300 8540461 -76898019 - MLT1F1 LTR MaLR -70 497 343 1934 127 3 7 chr17 8540461 8540745 -76897735 + AluSq SINE Alu 1 283 -30 282 29 0 0 chr17 8540748 8540783 -76897697 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 1687 228 63 31 chr17 8540783 8541037 -76897443 - MLT1F1 LTR MaLR -225 342 59 6022 121 32 57 chr17 8541039 8542623 -76895857 - pTR5 LTR ERV1 0 2438 743 2270 123 0 0 chr17 8543171 8543472 -76895008 - AluSx SINE Alu -11 301 1 615 200 50 14 chr17 8543615 8543755 -76894725 - MIR SINE MIR -32 230 86 594 205 53 78 chr17 8544348 8544507 -76893973 + LTR37A LTR ERV1 189 341 -85 2206 129 0 10 chr17 8544507 8544817 -76893663 - AluSx SINE Alu -4 308 2 594 205 53 78 chr17 8544817 8544901 -76893579 + LTR37A LTR ERV1 341 426 0 273 340 0 10 chr17 8544927 8545030 -76893450 + L2 LINE L2 2640 2741 -573 1740 138 15 67 chr17 8545454 8545781 -76892699 + AluJb SINE Alu 2 311 -1 330 267 141 30 chr17 8545781 8545916 -76892564 + L2 LINE L2 2741 2890 -424 256 372 35 0 chr17 8546199 8546312 -76892168 + L2 LINE L2 3134 3250 -22 2501 58 0 29 chr17 8546318 8546627 -76891853 - AluY SINE Alu -11 300 1 2588 169 40 33 chr17 8546703 8547302 -76891178 + L1MB7 LINE L1 5573 6175 -9 2530 69 0 0 chr17 8547303 8547606 -76890874 - AluY SINE Alu -8 303 1 1803 156 45 7 chr17 8547886 8548174 -76890306 - AluJo SINE Alu -13 299 1 1894 217 70 4 chr17 8548334 8548794 -76889686 + MLT1E2 LTR MaLR 137 626 0 1734 236 29 87 chr17 8551070 8551723 -76886757 + MLT2F LTR ERVL 3 617 -46 638 109 46 17 chr17 8551745 8551920 -76886560 + (TCTA)n Simple_repeat Simple_repeat 1 180 0 401 80 100 13 chr17 8551940 8552090 -76886390 + (TCTA)n Simple_repeat Simple_repeat 3 165 0 720 89 0 0 chr17 8552090 8552191 -76886289 + (TCCA)n Simple_repeat Simple_repeat 3 103 0 435 19 0 0 chr17 8552191 8552243 -76886237 + (TCTA)n Simple_repeat Simple_repeat 1 52 0 1006 158 27 0 chr17 8552346 8552530 -76885950 - MER5A DNA MER1_type 0 189 1 540 336 0 0 chr17 8552970 8553116 -76885364 - L3 LINE CR1 -719 858 713 312 255 69 44 chr17 8553318 8553339 -76885141 + L1M4 LINE L1 1230 1249 -5395 2105 98 46 0 chr17 8553339 8553624 -76884856 + AluSq SINE Alu 16 313 0 312 255 69 44 chr17 8553624 8553749 -76884731 + L1M4 LINE L1 1249 3695 -2949 2163 133 0 13 chr17 8554364 8554679 -76883801 - AluSx SINE Alu -1 311 1 267 213 21 117 chr17 8555121 8555215 -76883265 + MIR3 SINE MIR 88 172 -36 4707 106 13 4 chr17 8555224 8555923 -76882557 + L1PA13 LINE L1 5418 6122 -41 1201 59 0 0 chr17 8555925 8556060 -76882420 + AluY SINE Alu 1 135 -176 2768 26 3 0 chr17 8556061 8556366 -76882114 + AluY SINE Alu 1 306 -5 22 0 0 0 chr17 8556388 8556410 -76882070 + AT_rich Low_complexity Low_complexity 1 22 0 274 286 0 0 chr17 8556518 8556595 -76881885 - MIR SINE MIR -105 157 81 2320 88 7 0 chr17 8557548 8557831 -76880649 - AluSq SINE Alu -28 285 1 1780 194 53 45 chr17 8557902 8558371 -76880109 + Charlie1b DNA MER1_type 19 491 -32 636 100 0 0 chr17 8558608 8558698 -76879782 - AluS SINE Alu -222 91 2 449 180 56 0 chr17 8558699 8558788 -76879692 - MER113 DNA MER1_type? -203 318 225 722 232 73 6 chr17 8558863 8559040 -76879440 + MER5A DNA MER1_type 1 189 0 258 81 0 0 chr17 8559337 8559374 -76879106 + (TG)n Simple_repeat Simple_repeat 1 37 0 23 0 0 0 chr17 8559405 8559428 -76879052 + GC_rich Low_complexity Low_complexity 1 23 0 504 229 39 50 chr17 8559887 8560066 -76878414 - MER5B DNA MER1_type -1 177 1 262 319 18 98 chr17 8560108 8560271 -76878209 - L2 LINE L2 -8 3264 3115 459 209 5 53 chr17 8560953 8561140 -76877340 + GA-rich Low_complexity Low_complexity 3 180 0 560 185 105 136 chr17 8561320 8561644 -76876836 + L1MC5 LINE L1 6835 7148 -813 506 182 31 8 chr17 8561661 8561777 -76876703 - L1ME3 LINE L1 -177 5985 5883 * 708 234 99 73 chr17 8561772 8561877 -76876603 + L1MC5 LINE L1 7513 7614 -347 1764 165 0 34 chr17 8561877 8562168 -76876312 - AluJb SINE Alu -31 281 1 708 234 99 73 chr17 8562168 8562447 -76876033 + L1MC5 LINE L1 7614 7907 -54 2500 73 0 3 chr17 8562507 8562807 -76875673 - AluSg SINE Alu -11 299 1 227 282 119 30 chr17 8563155 8563357 -76875123 - L2 LINE L2 -639 2675 2456 2459 94 0 0 chr17 8563578 8563885 -76874595 - AluSq SINE Alu -6 307 1 2325 69 10 3 chr17 8564265 8564554 -76873926 + AluSq SINE Alu 15 305 -8 362 331 28 17 chr17 8564843 8565021 -76873459 + MIR SINE MIR 63 242 -20 266 293 16 8 chr17 8565142 8565265 -76873215 + (CA)n Simple_repeat Simple_repeat 2 125 0 315 348 56 28 chr17 8566730 8566908 -76871572 - MER5A DNA MER1_type 0 189 7 180 77 0 0 chr17 8567370 8567396 -76871084 + (TTCA)n Simple_repeat Simple_repeat 3 28 0 2449 87 0 0 chr17 8569416 8569725 -76868755 - AluSx SINE Alu -3 309 1 279 54 0 0 chr17 8570874 8570911 -76867569 + (TTCCC)n Simple_repeat Simple_repeat 4 40 0 333 187 47 65 chr17 8571054 8571133 -76867347 + Tigger2 DNA MER2_type 2614 2692 -26 181 0 33 33 chr17 8571133 8571163 -76867317 + (CCCCCG)n Simple_repeat Simple_repeat 4 33 0 333 187 47 65 chr17 8571163 8571190 -76867290 + Tigger2 DNA MER2_type 2692 2718 0 2375 93 3 10 chr17 8571851 8572163 -76866317 + AluSg SINE Alu 1 310 0 3308 163 38 52 chr17 8573118 8573191 -76865289 + L1MA7 LINE L1 5541 5614 -677 2403 88 13 0 chr17 8573191 8573497 -76864983 + AluSp SINE Alu 1 310 -3 3308 163 38 52 chr17 8573497 8574185 -76864295 + L1MA7 LINE L1 5614 6291 0 927 99 14 127 chr17 8574524 8574650 -76863830 - MER53 DNA DNA 0 189 95 2308 111 0 0 chr17 8574650 8574948 -76863532 + AluSg SINE Alu 1 298 -12 927 99 14 127 chr17 8574948 8575034 -76863446 - MER53 DNA DNA -94 95 1 2297 81 17 10 chr17 8575499 8575796 -76862684 - AluSg SINE Alu -11 299 1 489 298 28 18 chr17 8576358 8576631 -76861849 + L1ME1 LINE L1 5835 6161 -5 2417 86 0 0 chr17 8576739 8577031 -76861449 + AluSc SINE Alu 2 293 -16 2245 99 27 0 chr17 8577509 8577803 -76860677 - AluSg SINE Alu -8 302 1 592 285 28 0 chr17 8577985 8578129 -76860351 + MIR SINE MIR 13 160 -102 964 305 57 9 chr17 8578133 8578451 -76860029 - MLT1I LTR MaLR -18 391 59 1605 174 13 29 chr17 8579490 8579904 -76858576 - AluJo SINE Alu 0 409 1 190 317 17 0 chr17 8579938 8579998 -76858482 + MIR SINE MIR 22 82 -180 230 352 74 34 chr17 8580099 8580148 -76858332 - L2 LINE L2 -224 3048 3002 2018 200 40 15 chr17 8580148 8580604 -76857876 + MLT1C LTR MaLR 1 467 0 230 352 74 34 chr17 8580604 8580730 -76857750 - L2 LINE L2 -270 3002 2866 1828 155 3 0 chr17 8580795 8581086 -76857394 + AluJb SINE Alu 1 292 -20 228 125 0 0 chr17 8581086 8581118 -76857362 + (GA)n Simple_repeat Simple_repeat 1 32 0 474 122 31 10 chr17 8581125 8581223 -76857257 + GA-rich Low_complexity Low_complexity 4 103 0 1232 88 0 6 chr17 8581244 8581425 -76857055 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 201 283 75 0 chr17 8581719 8581772 -76856708 + L2 LINE L2 3169 3225 -47 527 233 52 70 chr17 8581781 8581882 -76856598 - MLT1K LTR MaLR 0 588 490 2271 184 22 11 chr17 8581882 8582344 -76856136 - MLT1C LTR MaLR 0 467 1 527 233 52 70 chr17 8582344 8582414 -76856066 - MLT1K LTR MaLR -98 490 420 1382 266 64 37 chr17 8582832 8583346 -76855134 + MLT1K LTR MaLR 10 537 -51 268 164 29 173 chr17 8583724 8583828 -76854652 - MIR SINE MIR -70 192 104 244 342 49 81 chr17 8583908 8583961 -76854519 - L2 LINE L2 -4 3268 3215 2216 92 0 7 chr17 8583961 8584264 -76854216 - AluY SINE Alu -10 301 1 244 342 49 81 chr17 8584264 8584555 -76853925 - L2 LINE L2 -57 3215 2935 1741 234 97 21 chr17 8584850 8584915 -76853565 - MLT1H1 LTR MaLR 0 555 496 1668 159 14 3 chr17 8584915 8585211 -76853269 - AluJo SINE Alu -13 299 1 1741 234 97 21 chr17 8585211 8585661 -76852819 - MLT1H1 LTR MaLR -59 496 1 668 183 15 23 chr17 8585734 8585865 -76852615 - L2 LINE L2 -2 3311 3182 594 147 96 6 chr17 8586191 8586347 -76852133 - L1MC5 LINE L1 -111 7850 7681 1365 191 0 0 chr17 8586357 8586598 -76851882 + AluJb SINE Alu 58 298 -14 429 190 156 83 chr17 8586599 8586804 -76851676 - L1MC5 LINE L1 -269 7692 7473 1893 155 0 29 chr17 8586816 8587164 -76851316 - MER44D DNA MER2_type -1 608 1 1232 114 5 35 chr17 8587167 8587368 -76851112 - AluSg/x SINE Alu -12 300 106 410 268 99 23 chr17 8587570 8587770 -76850710 - MIR SINE MIR -49 213 8 274 294 24 12 chr17 8588214 8588299 -76850181 - L2 LINE L2 -1 3271 3186 441 308 38 25 chr17 8588411 8588570 -76849910 + MIR SINE MIR 13 173 -89 960 96 0 15 chr17 8589274 8589409 -76849071 - FLAM_C SINE Alu 0 133 1 250 118 20 39 chr17 8590950 8591001 -76847479 - L2 LINE L2 -22 3250 3201 445 299 33 33 chr17 8591009 8591193 -76847287 + MIR3 SINE MIR 20 203 -5 2170 107 3 3 chr17 8591206 8591506 -76846974 + AluSp SINE Alu 1 300 -13 251 259 0 0 chr17 8591611 8591669 -76846811 - MIR3 SINE MIR -4 204 147 291 331 16 24 chr17 8591718 8591842 -76846638 + MARNA DNA Mariner 81 203 -383 311 317 61 43 chr17 8591981 8592145 -76846335 + HAL1b LINE L1 498 664 -684 1223 307 92 57 chr17 8592226 8593184 -76845296 + L1M4 LINE L1 4304 5294 -852 815 252 25 80 chr17 8593227 8593501 -76844979 + MIR SINE MIR 2 260 -2 4066 57 2 2 chr17 8593514 8594023 -76844457 + L1PA8 LINE L1 5660 6168 -4 265 247 26 26 chr17 8594566 8594643 -76843837 + MIR SINE MIR 60 136 -72 661 53 21 0 chr17 8594943 8595037 -76843443 + (GA)n Simple_repeat Simple_repeat 1 96 0 565 279 32 20 chr17 8595410 8595611 -76842869 + MIR SINE MIR 1 208 -54 629 218 0 5 chr17 8596292 8596884 -76841596 + (CA)n Simple_repeat Simple_repeat 1 588 0 878 302 20 24 chr17 8597744 8597999 -76840481 - MIR SINE MIR -6 256 3 2310 72 0 10 chr17 8598081 8598388 -76840092 + AluY SINE Alu 1 304 -7 1270 103 0 0 chr17 8598400 8598574 -76839906 + AluJb SINE Alu 134 307 -5 838 199 4 108 chr17 8599323 8599554 -76838926 + MIR SINE MIR 36 242 -20 1950 91 12 75 chr17 8599592 8599923 -76838557 - AluSx SINE Alu -2 310 1 373 241 0 36 chr17 8600587 8600670 -76837810 + L2 LINE L2 3185 3264 -49 261 200 20 0 chr17 8600675 8600725 -76837755 - L2 LINE L2 -38 3275 3225 251 239 45 102 chr17 8600722 8600761 -76837719 - L2 LINE L2 -248 3065 3025 * 2258 91 0 3 chr17 8600761 8601059 -76837421 - AluSc SINE Alu -12 297 1 251 239 45 102 chr17 8601059 8601107 -76837373 - L2 LINE L2 -288 3025 2983 1151 206 3 57 chr17 8601326 8601494 -76836986 + L1M4 LINE L1 2626 2773 -3373 2225 91 0 0 chr17 8601494 8601791 -76836689 - AluSx SINE Alu -15 297 1 1151 206 3 57 chr17 8601791 8601918 -76836562 + L1M4 LINE L1 2773 2905 -3241 1152 125 0 27 chr17 8603316 8603500 -76834980 + FRAM SINE Alu 1 176 0 1365 82 6 0 chr17 8603866 8604049 -76834431 - AluSp SINE Alu -129 184 1 514 158 0 0 chr17 8604049 8604218 -76834262 - L1M4 LINE L1 -1763 4383 4185 240 171 0 0 chr17 8604218 8604252 -76834228 - MLT1C LTR MaLR 0 467 434 388 118 0 0 chr17 8604252 8604303 -76834177 - Tigger5 DNA MER2_type 0 2323 2273 2240 93 0 10 chr17 8604311 8604613 -76833867 - AluSx SINE Alu -13 299 1 1622 238 36 19 chr17 8604648 8605110 -76833370 - MLT1C LTR MaLR -33 593 11 231 229 0 0 chr17 8605233 8605294 -76833186 + C-rich Low_complexity Low_complexity 5 65 0 229 339 12 24 chr17 8605304 8605469 -76833011 + L1M4 LINE L1 4497 4659 -1487 294 282 49 14 chr17 8605776 8605918 -76832562 + L1M4 LINE L1 4801 4947 -1199 1232 222 43 49 chr17 8606177 8606227 -76832253 + MLT1A1 LTR MaLR 1 50 -315 2483 106 17 0 chr17 8606227 8606576 -76831904 - THE1A LTR MaLR 0 355 1 1232 222 43 49 chr17 8606576 8606854 -76831626 + MLT1A1 LTR MaLR 50 327 -38 844 159 53 0 chr17 8606850 8607001 -76831479 + MLT1A1 LTR MaLR 207 365 0 * 289 185 96 25 chr17 8607001 8607186 -76831294 - L1MC/D LINE L1 -761 5410 5254 1743 141 7 33 chr17 8607500 8607670 -76830810 - AluJb SINE Alu -16 296 136 2057 94 0 24 chr17 8607670 8607968 -76830512 - AluSc SINE Alu -18 291 1 1743 141 7 33 chr17 8607968 8608101 -76830379 - AluJb SINE Alu -176 136 1 1717 127 0 0 chr17 8608517 8608769 -76829711 + AluSq SINE Alu 9 260 -53 207 0 0 0 chr17 8608792 8608815 -76829665 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 2138 92 0 0 chr17 8608831 8609137 -76829343 + AluY SINE Alu 1 306 0 1119 155 5 0 chr17 8611212 8611412 -76827068 - AluJb SINE Alu -25 287 87 645 165 24 24 chr17 8612105 8612232 -76826248 + AluJo SINE Alu 2 128 -174 206 234 0 0 chr17 8612518 8612565 -76825915 + L2 LINE L2 3267 3313 0 1363 191 39 11 chr17 8612715 8612997 -76825483 + AluJo SINE Alu 11 300 -12 1012 163 0 0 chr17 8614475 8614641 -76823839 + AluJo SINE Alu 137 302 0 230 0 33 0 chr17 8615290 8615320 -76823160 + (TTTTA)n Simple_repeat Simple_repeat 5 35 0 791 229 0 0 chr17 8615320 8615464 -76823016 - FRAM SINE Alu -32 144 1 180 0 0 0 chr17 8616169 8616189 -76822291 + (TC)n Simple_repeat Simple_repeat 2 21 0 1724 122 0 8 chr17 8616189 8616443 -76822037 - AluSc SINE Alu -17 292 41 1413 207 7 0 chr17 8617748 8618033 -76820447 + AluJo SINE Alu 1 287 -25 545 350 66 34 chr17 8618172 8618609 -76819871 - L3 LINE CR1 -156 1421 971 998 195 0 0 chr17 8618662 8618852 -76819628 + AluJb SINE Alu 6 195 -117 277 245 21 0 chr17 8618894 8618973 -76819507 - MER5A DNA MER1_type -32 146 65 1495 175 3 7 chr17 8619217 8619503 -76818977 + AluJb SINE Alu 13 297 -15 383 340 72 30 chr17 8619570 8619805 -76818675 + L1 LINE L1 4538 4782 -1364 1509 174 57 63 chr17 8620416 8620462 -76818018 + MLT1A1 LTR MaLR 1 46 -319 2620 99 3 3 chr17 8620462 8620817 -76817663 - THE1A LTR MaLR 0 355 1 1509 174 57 63 chr17 8620817 8621137 -76817343 + MLT1A1 LTR MaLR 46 365 0 322 200 0 0 chr17 8621137 8621192 -76817288 - L1MC/D LINE L1 -2305 6001 5947 1881 145 7 0 chr17 8621629 8621925 -76816555 - AluJb SINE Alu -14 298 1 1979 129 0 7 chr17 8622337 8622631 -76815849 + AluSx SINE Alu 3 294 -18 2107 94 0 7 chr17 8622753 8623041 -76815439 - AluY SINE Alu -25 286 1 4089 153 11 25 chr17 8623177 8623299 -76815181 - L1MB2 LINE L1 -2 6169 6047 2355 73 0 3 chr17 8623299 8623602 -76814878 + AluY SINE Alu 1 302 -9 4089 153 11 25 chr17 8623602 8624226 -76814254 - L1MB2 LINE L1 -124 6047 5434 383 299 102 16 chr17 8624356 8624483 -76813997 - L2 LINE L2 -7 3306 3169 1419 191 0 47 chr17 8625722 8626052 -76812428 - AluJb SINE Alu 0 316 1 23 0 0 0 chr17 8626278 8626301 -76812179 + AT_rich Low_complexity Low_complexity 1 23 0 227 252 148 30 chr17 8626603 8626738 -76811742 - MIR3 SINE MIR -4 204 54 3947 67 12 2 chr17 8626874 8627382 -76811098 + LTR10D LTR ERV1 1 513 0 1684 162 28 99 chr17 8627591 8627985 -76810495 + MLT1A2 LTR MaLR 1 366 -8 488 322 91 91 chr17 8628196 8628809 -76809671 + L1MEd LINE L1 683 1420 -1070 822 285 142 19 chr17 8628848 8629321 -76809159 - L1MC4a LINE L1 -1661 6147 5617 417 262 88 59 chr17 8629324 8629510 -76808970 - L1MC/D LINE L1 -775 5869 5690 2639 58 0 0 chr17 8629510 8629819 -76808661 - AluY SINE Alu -2 309 1 1671 168 7 34 chr17 8629826 8630124 -76808356 - AluJb SINE Alu -22 290 1 417 262 88 59 chr17 8630124 8630269 -76808211 - L1MC/D LINE L1 -959 5685 5520 2130 118 7 3 chr17 8630274 8630571 -76807909 - AluJb SINE Alu -14 298 1 236 290 39 32 chr17 8630574 8630729 -76807751 - L1MC/D LINE L1 -1103 5541 5386 2356 114 0 3 chr17 8631031 8631337 -76807143 - AluSx SINE Alu -7 305 1 1636 110 24 12 chr17 8631358 8631613 -76806867 - L1MA2 LINE L1 0 6304 6047 287 243 0 9 chr17 8631613 8631720 -76806760 - L1MC/D LINE L1 -1641 5003 4898 510 246 130 19 chr17 8631735 8631950 -76806530 + HAL1 LINE L1 1431 1669 -838 3591 238 28 40 chr17 8631983 8633313 -76805167 - L1MC/D LINE L1 -4314 2511 1166 2438 80 0 0 chr17 8633313 8633614 -76804866 - AluY SINE Alu -10 301 1 3591 238 28 40 chr17 8633614 8633635 -76804845 - L1MC/D LINE L1 -5659 1166 1146 1494 175 46 103 chr17 8633635 8634020 -76804460 + MSTB1 LTR MaLR 1 357 -75 1798 188 0 3 chr17 8634020 8634323 -76804157 - AluJo SINE Alu -6 306 5 1494 175 46 103 chr17 8634323 8634395 -76804085 + MSTB1 LTR MaLR 357 432 0 3591 238 28 40 chr17 8634395 8634565 -76803915 - L1MC/D LINE L1 -5679 1146 880 2011 253 55 67 chr17 8634620 8635506 -76802974 - L1MC/D LINE L1 -5653 889 14 433 273 131 22 chr17 8636062 8636520 -76801960 + L1ME2 LINE L1 2113 2620 -3526 527 258 85 51 chr17 8636587 8637022 -76801458 + L1ME2 LINE L1 2750 3199 -2947 237 200 0 18 chr17 8637120 8637175 -76801305 - MLT1L LTR MaLR -205 410 357 247 171 12 110 chr17 8637297 8637379 -76801101 - MLT1L LTR MaLR -534 81 8 1208 279 98 83 chr17 8637379 8637830 -76800650 + L1ME2 LINE L1 3356 3799 -2347 2446 87 0 3 chr17 8637830 8638130 -76800350 + AluSq SINE Alu 1 299 -14 1208 279 98 83 chr17 8638130 8638319 -76800161 + L1ME2 LINE L1 3799 3984 -2162 1102 174 190 28 chr17 8638319 8638566 -76799914 + AluJo SINE Alu 2 288 -14 1208 279 98 83 chr17 8638566 8639059 -76799421 + L1ME2 LINE L1 3984 4468 -1678 2468 65 0 0 chr17 8639059 8639375 -76799105 + AluY SINE Alu 1 316 0 1208 279 98 83 chr17 8639375 8640188 -76798292 + L1ME2 LINE L1 4468 5334 -812 6501 142 42 85 chr17 8640313 8641518 -76796962 + L1MCa LINE L1 21 1162 -5264 2356 92 0 3 chr17 8641518 8641822 -76796658 + AluSg SINE Alu 1 303 -7 6501 142 42 85 chr17 8641822 8641965 -76796515 + L1MCa LINE L1 1162 1310 -5116 3187 138 7 41 chr17 8641964 8642285 -76796195 - L1M3 LINE L1 -363 5820 5531 * 1858 137 32 0 chr17 8642285 8642582 -76795898 - AluSx SINE Alu 0 306 1 3187 138 7 41 chr17 8642582 8642932 -76795548 - L1M3 LINE L1 -652 5531 5171 329 227 9 45 chr17 8644988 8645098 -76793382 - MIR3 SINE MIR -18 190 85 2665 114 62 0 chr17 8645130 8645533 -76792947 - MSTC LTR MaLR 0 428 1 2319 60 20 27 chr17 8645816 8645992 -76792488 - AluY SINE Alu -12 299 124 225 0 0 0 chr17 8645992 8646017 -76792463 + (TG)n Simple_repeat Simple_repeat 2 26 0 2319 60 20 27 chr17 8646017 8646141 -76792339 - AluY SINE Alu -187 124 1 351 258 42 42 chr17 8646606 8646726 -76791754 + MIR SINE MIR 32 151 -111 204 290 21 21 chr17 8647037 8647130 -76791350 + MIR SINE MIR 104 196 -66 448 275 22 0 chr17 8647339 8647477 -76791003 + MER103 DNA DNA 23 163 -3 2236 205 4 52 chr17 8649393 8649453 -76789027 + L1ME2 LINE L1 5382 5443 -723 1397 180 134 10 chr17 8649453 8649758 -76788722 - MER2 DNA MER2_type 0 344 2 2236 205 4 52 chr17 8649758 8650199 -76788281 + L1ME2 LINE L1 5443 5859 -307 994 211 119 144 chr17 8650209 8650938 -76787542 + MER21B LTR ERV1 9 719 -144 271 181 110 40 chr17 8650938 8651039 -76787441 + L1ME2 LINE L1 5870 5986 -180 300 127 55 0 chr17 8651098 8651153 -76787327 + L1MA10 LINE L1 6277 6334 0 2612 62 0 0 chr17 8651436 8651745 -76786735 + AluY SINE Alu 1 309 -2 22 0 0 0 chr17 8651746 8651768 -76786712 + AT_rich Low_complexity Low_complexity 1 22 0 335 41 20 0 chr17 8651906 8651955 -76786525 + (TG)n Simple_repeat Simple_repeat 2 51 0 206 288 27 41 chr17 8651971 8652044 -76786436 + L2 LINE L2 3151 3222 -50 728 241 80 44 chr17 8652469 8652718 -76785762 + MIR SINE MIR 2 259 -3 259 221 93 48 chr17 8652793 8652907 -76785573 - MER5A DNA MER1_type -14 165 39 195 256 150 25 chr17 8652952 8653094 -76785386 + MIR SINE MIR 29 189 -73 253 275 99 28 chr17 8653197 8653339 -76785141 + MLT1J LTR MaLR 5 156 -355 1820 146 11 7 chr17 8653370 8653677 -76784803 - AluJo SINE Alu 0 312 11 500 260 111 37 chr17 8653728 8653971 -76784509 + MLT1L LTR MaLR 224 560 -55 2093 101 0 28 chr17 8654040 8654374 -76784106 + AluSc SINE Alu 1 326 0 2343 87 0 0 chr17 8654978 8655264 -76783216 - AluSc SINE Alu -23 286 1 180 111 0 0 chr17 8657751 8657778 -76780702 + (CGGGGG)n Simple_repeat Simple_repeat 3 29 0 407 245 7 135 chr17 8658020 8658302 -76780178 + L2 LINE L2 2978 3223 -90 416 293 8 8 chr17 8658325 8658448 -76780032 - LTR16A LTR ERVL -264 186 64 2408 83 0 3 chr17 8658771 8659071 -76779409 + AluY SINE Alu 1 299 -12 984 104 7 14 chr17 8660383 8660527 -76777953 + FLAM_C SINE Alu 1 143 0 2270 96 13 22 chr17 8660539 8660851 -76777629 + AluSx SINE Alu 1 309 -3 764 176 21 21 chr17 8660855 8660997 -76777483 + AluJb SINE Alu 131 272 -40 201 366 42 0 chr17 8663202 8663273 -76775207 - L3b LINE CR1 0 1583 1510 * 325 217 245 35 chr17 8663259 8663402 -76775078 - MER5B DNA MER1_type -5 173 1 711 199 226 5 chr17 8663549 8663735 -76774745 + MIR SINE MIR 16 242 -20 2283 109 0 7 chr17 8664036 8664338 -76774142 + AluSx SINE Alu 1 300 -12 303 253 74 0 chr17 8665554 8665649 -76772831 + L3 LINE CR1 1342 1443 -134 299 285 21 90 chr17 8665928 8666072 -76772408 - L2 LINE L2 -219 3053 2920 646 180 9 0 chr17 8666308 8666419 -76772061 - MER81 DNA DNA 0 114 3 298 239 67 67 chr17 8666605 8666739 -76771741 - MIR SINE MIR -8 254 121 454 177 25 0 chr17 8666759 8666838 -76771642 - MER2 DNA MER2_type -264 81 1 535 224 80 0 chr17 8666840 8666965 -76771515 - MIR SINE MIR -116 146 12 202 380 107 10 chr17 8666977 8667285 -76771195 - L2 LINE L2 -957 2357 2020 2018 228 25 0 chr17 8667461 8667895 -76770585 + L1PA15-16 LINE L1 2445 2889 -3960 1224 142 0 71 chr17 8667899 8668111 -76770369 + AluJb SINE Alu 1 197 -115 1339 184 82 3 chr17 8668114 8668430 -76770050 + L1 LINE L1 2881 3221 -3628 2395 110 42 20 chr17 8668434 8668790 -76769690 - THE1B LTR MaLR 0 364 1 11908 78 25 5 chr17 8668790 8670339 -76768141 - THE1B-int LTR MaLR 0 1580 1 2357 94 50 20 chr17 8670347 8670688 -76767792 - THE1B LTR MaLR -13 351 1 8146 194 13 11 chr17 8670688 8672387 -76766093 + L1 LINE L1 3221 4922 -1927 2373 99 0 0 chr17 8672618 8672920 -76765560 - AluSg SINE Alu -8 302 1 1053 257 43 36 chr17 8672993 8673409 -76765071 + HAL1 LINE L1 1116 1534 -973 2209 90 0 0 chr17 8673644 8673923 -76764557 + AluSc SINE Alu 17 295 -14 1281 283 76 35 chr17 8674095 8674161 -76764319 + L1MEd LINE L1 330 392 -5727 186 43 0 0 chr17 8674161 8674184 -76764296 + (CAAA)n Simple_repeat Simple_repeat 4 26 0 1281 283 76 35 chr17 8674184 8674658 -76763822 + L1MEd LINE L1 392 892 -5227 450 144 222 78 chr17 8674678 8674831 -76763649 + MER104 DNA Tc2 6 180 0 346 278 148 60 chr17 8675035 8675722 -76762758 + L1ME4a LINE L1 5330 6077 -44 2233 93 4 0 chr17 8675764 8676076 -76762404 + AluSg SINE Alu 1 313 0 207 100 0 0 chr17 8676311 8676341 -76762139 + (T)n Simple_repeat Simple_repeat 1 30 0 2199 128 0 0 chr17 8676769 8677065 -76761415 + AluSx SINE Alu 1 296 -16 21 0 0 0 chr17 8678048 8678069 -76760411 + AT_rich Low_complexity Low_complexity 1 21 0 231 204 0 0 chr17 8678073 8678122 -76760358 + (CATATA)n Simple_repeat Simple_repeat 4 52 0 228 200 18 0 chr17 8678122 8678177 -76760303 - L1MCa LINE L1 -4362 2064 2009 216 216 0 0 chr17 8678183 8678234 -76760246 + (TA)n Simple_repeat Simple_repeat 1 51 0 330 218 0 89 chr17 8678241 8678342 -76760138 + L1MC4 LINE L1 6614 6705 -1337 1379 83 10 42 chr17 8678357 8678550 -76759930 - AluSg/x SINE Alu -20 292 106 347 278 43 71 chr17 8678793 8678952 -76759528 - MIR SINE MIR -62 146 8 272 296 74 9 chr17 8679396 8679504 -76758976 - L2 LINE L2 -1 3312 3198 440 308 38 25 chr17 8679593 8679752 -76758728 + MIR SINE MIR 13 173 -89 975 96 0 15 chr17 8680455 8680590 -76757890 - FLAM_C SINE Alu 0 133 1 252 118 20 39 chr17 8682131 8682182 -76756298 - L2 LINE L2 -22 3250 3201 453 299 33 33 chr17 8682190 8682374 -76756106 + MIR3 SINE MIR 20 203 -5 2323 107 3 3 chr17 8682387 8682687 -76755793 + AluSp SINE Alu 1 300 -13 252 259 0 0 chr17 8682792 8682850 -76755630 - MIR3 SINE MIR -4 204 147 267 331 16 24 chr17 8682899 8683023 -76755457 + MARNA DNA Mariner 81 203 -383 316 317 61 43 chr17 8683162 8683326 -76755154 + HAL1b LINE L1 498 664 -684 1287 302 96 62 chr17 8683407 8684365 -76754115 + L1M4 LINE L1 4304 5294 -852 827 259 25 80 chr17 8684408 8684682 -76753798 + MIR SINE MIR 2 260 -2 4067 57 2 2 chr17 8684695 8685204 -76753276 + L1PA8 LINE L1 5660 6168 -4 266 247 26 26 chr17 8685747 8685824 -76752656 + MIR SINE MIR 60 136 -72 661 53 21 0 chr17 8686124 8686218 -76752262 + (GA)n Simple_repeat Simple_repeat 1 96 0 568 279 32 20 chr17 8686591 8686792 -76751688 + MIR SINE MIR 1 208 -54 629 218 0 5 chr17 8687473 8688065 -76750415 + (CA)n Simple_repeat Simple_repeat 1 588 0 887 302 20 24 chr17 8688925 8689180 -76749300 - MIR SINE MIR -6 256 3 2457 72 0 10 chr17 8689262 8689569 -76748911 + AluY SINE Alu 1 304 -7 1354 103 0 0 chr17 8689581 8689755 -76748725 + AluJb SINE Alu 134 307 -5 835 199 4 108 chr17 8690504 8690735 -76747745 + MIR SINE MIR 36 242 -20 2094 91 12 75 chr17 8690773 8691104 -76747376 - AluSx SINE Alu -2 310 1 374 241 0 36 chr17 8691768 8691851 -76746629 + L2 LINE L2 3185 3264 -49 257 196 22 0 chr17 8691856 8691902 -76746578 - L2 LINE L2 -38 3275 3229 717 232 20 111 chr17 8691903 8691942 -76746538 - L2 LINE L2 -248 3065 3024 2404 91 0 3 chr17 8691942 8692240 -76746240 - AluSc SINE Alu -12 297 1 717 232 20 111 chr17 8692240 8692287 -76746193 - L2 LINE L2 -289 3024 2974 2319 68 41 3 chr17 8692287 8692579 -76745901 + AluY SINE Alu 1 303 -8 717 232 20 111 chr17 8692579 8692793 -76745687 - L2 LINE L2 -339 2974 2810 1519 187 37 30 chr17 8692793 8693093 -76745387 - AluJo SINE Alu -10 302 1 717 232 20 111 chr17 8693093 8693154 -76745326 - L2 LINE L2 -503 2810 2745 2242 113 0 0 chr17 8693245 8693538 -76744942 - AluSx SINE Alu -19 293 1 231 207 184 23 chr17 8694022 8694109 -76744371 - Charlie8 DNA MER1_type -2141 276 176 184 153 0 68 chr17 8695330 8695389 -76743091 + GA-rich Low_complexity Low_complexity 2 56 0 675 212 16 22 chr17 8696675 8696859 -76741621 - MER113 DNA MER1_type? -304 217 35 2263 128 0 0 chr17 8697466 8697778 -76740702 + AluSx SINE Alu 1 312 0 375 219 27 0 chr17 8698305 8698378 -76740102 - MER113 DNA MER1_type? -5 516 442 410 167 2 98 chr17 8698418 8699093 -76739387 + (TA)n Simple_repeat Simple_repeat 1 610 0 260 57 0 0 chr17 8699101 8699136 -76739344 - MADE1 DNA Mariner 0 80 46 2377 88 0 0 chr17 8699136 8699152 -76739328 - AluY SINE Alu -14 297 282 180 0 0 0 chr17 8699152 8699172 -76739308 + (TG)n Simple_repeat Simple_repeat 1 20 0 2377 88 0 0 chr17 8699172 8699452 -76739028 - AluY SINE Alu -28 283 1 27 0 0 0 chr17 8699500 8699527 -76738953 + AT_rich Low_complexity Low_complexity 1 27 0 226 231 0 131 chr17 8699582 8699640 -76738840 - MER113 DNA MER1_type? -402 119 86 2017 171 72 22 chr17 8699640 8700084 -76738396 + MER31B LTR ERV1 1 466 0 226 231 0 131 chr17 8700084 8700155 -76738325 - MER113 DNA MER1_type? -435 86 7 357 276 117 41 chr17 8700156 8700237 -76738243 + LTR16B LTR ERVL 1 74 -390 2501 117 57 29 chr17 8700237 8700657 -76737823 + MSTB1 LTR MaLR 1 432 0 357 276 117 41 chr17 8700657 8700972 -76737508 + LTR16B LTR ERVL 74 464 0 209 140 0 40 chr17 8701475 8701525 -76736955 + (CGGGG)n Simple_repeat Simple_repeat 2 49 0 23 54 0 0 chr17 8701901 8701938 -76736542 + GC_rich Low_complexity Low_complexity 1 37 0 251 179 60 0 chr17 8702929 8702996 -76735484 + G-rich Low_complexity Low_complexity 4 74 0 1660 163 0 45 chr17 8702998 8703287 -76735193 - AluJb SINE Alu -36 276 1 361 293 63 26 chr17 8703339 8703530 -76734950 - HAL1b LINE L1 -669 679 482 181 313 47 0 chr17 8703548 8703612 -76734868 + MIR SINE MIR 166 232 -30 699 117 27 0 chr17 8703688 8703799 -76734681 - FRAM SINE Alu -6 170 57 800 177 61 61 chr17 8703880 8703950 -76734530 - AluJo SINE Alu -130 182 113 2304 85 6 38 chr17 8703950 8704266 -76734214 - AluY SINE Alu -5 306 1 800 177 61 61 chr17 8704266 8704376 -76734104 - AluJo SINE Alu -198 114 2 292 381 45 0 chr17 8704499 8704633 -76733847 + MIR3 SINE MIR 50 189 -19 3902 142 24 39 chr17 8704676 8705155 -76733325 + L1MB8 LINE L1 5432 5898 -280 2309 104 0 3 chr17 8705155 8705463 -76733017 + AluSc SINE Alu 1 307 -2 3902 142 24 39 chr17 8705463 8705736 -76732744 + L1MB8 LINE L1 5898 6173 -5 293 320 50 30 chr17 8705745 8705845 -76732635 - L2 LINE L2 -15 3298 3197 2406 85 3 0 chr17 8706007 8706301 -76732179 - AluSp SINE Alu -12 301 7 986 190 6 0 chr17 8706448 8706622 -76731858 - AluJb SINE Alu -5 307 133 462 261 171 25 chr17 8706622 8706821 -76731659 + MIR SINE MIR 8 235 -27 969 243 78 51 chr17 8707233 8707268 -76731212 - MER20B DNA MER1_type -31 752 719 2394 93 3 0 chr17 8707268 8707578 -76730902 + AluSx SINE Alu 1 311 -1 969 243 78 51 chr17 8707578 8707683 -76730797 - MER20B DNA MER1_type -64 719 618 2184 132 0 7 chr17 8707683 8707993 -76730487 + AluSx SINE Alu 1 308 -4 969 243 78 51 chr17 8707993 8708538 -76729942 - MER20B DNA MER1_type -165 618 2 684 306 40 99 chr17 8709536 8709941 -76728539 - L2 LINE L2 -1 3271 2891 * 800 248 25 95 chr17 8709937 8710211 -76728269 - MIR SINE MIR -1 261 7 2398 167 95 6 chr17 8710311 8710814 -76727666 + MER74A LTR ERVL 1 548 -10 2276 122 0 7 chr17 8710814 8711117 -76727363 - AluSq SINE Alu -12 301 1 1053 202 5 10 chr17 8711303 8711511 -76726969 - AluJo SINE Alu -21 291 85 751 272 25 20 chr17 8711666 8711868 -76726612 - MIR SINE MIR 0 262 60 1972 128 28 14 chr17 8711868 8712156 -76726324 - AluSc SINE Alu -17 292 1 1939 103 72 0 chr17 8712167 8712603 -76725877 - AluSx SINE Alu 0 455 1 1966 198 8 45 chr17 8713446 8713855 -76724625 + Charlie4a DNA MER1_type 39 462 -1499 2234 46 0 4 chr17 8713855 8714116 -76724364 + AluY SINE Alu 1 260 -51 200 35 35 0 chr17 8714116 8714145 -76724335 + (CAAAA)n Simple_repeat Simple_repeat 3 32 0 1966 198 8 45 chr17 8714145 8714219 -76724261 + Charlie4a DNA MER1_type 460 505 -3 2348 104 0 3 chr17 8714637 8714946 -76723534 - AluSg SINE Alu -2 308 1 375 319 94 47 chr17 8714980 8715171 -76723309 - L1ME3A LINE L1 -7 6443 6244 363 264 67 1 chr17 8715171 8715390 -76723090 - L1ME3A LINE L1 -728 5716 5482 2556 61 0 3 chr17 8715392 8715702 -76722778 - AluY SINE Alu -2 309 1 2084 106 4 0 chr17 8715741 8716006 -76722474 - AluSp SINE Alu -47 266 1 340 211 16 12 chr17 8716006 8716086 -76722394 - L1ME3A LINE L1 -1086 5340 5259 2854 75 3 24 chr17 8716162 8716534 -76721946 - THE1B LTR MaLR 0 364 1 2660 233 69 37 chr17 8716764 8717216 -76721264 + L1ME1 LINE L1 5325 5816 -350 1879 148 3 20 chr17 8717216 8717520 -76720960 - AluJo SINE Alu -13 299 1 2660 233 69 37 chr17 8717520 8717878 -76720602 + L1ME1 LINE L1 5816 6161 -5 482 243 14 28 chr17 8717874 8718018 -76720462 + L1M4 LINE L1 3483 3624 -2522 * 833 138 0 0 chr17 8718039 8718155 -76720325 - FLAM_C SINE Alu -27 116 1 1174 255 20 3 chr17 8718155 8718508 -76719972 + L1M4 LINE L1 3615 3973 -2173 288 287 33 39 chr17 8718528 8718709 -76719771 - L1ME3A LINE L1 -1142 5284 5105 893 118 141 0 chr17 8718816 8718951 -76719529 - AluJb SINE Alu -22 290 137 4039 191 125 47 chr17 8719078 8720241 -76718239 - L1M4 LINE L1 -5276 1266 14 229 266 133 8 chr17 8720257 8720385 -76718095 - L1ME3A LINE L1 -1553 4873 4730 214 182 30 0 chr17 8720555 8720621 -76717859 + CT-rich Low_complexity Low_complexity 1 68 0 749 0 33 0 chr17 8720627 8720718 -76717762 + (TTTCC)n Simple_repeat Simple_repeat 4 97 0 2144 124 0 0 chr17 8720720 8721002 -76717478 - AluSq SINE Alu -31 282 1 422 306 46 0 chr17 8721002 8721198 -76717282 - L1ME3A LINE L1 -1874 4552 4348 1431 173 73 6 chr17 8721276 8721589 -76716891 - L1MB8 LINE L1 -6 6172 5839 2091 93 11 4 chr17 8721617 8721921 -76716559 + AluSg SINE Alu 1 306 0 1190 283 212 39 chr17 8721949 8722680 -76715800 - L1ME3A LINE L1 -2105 4321 3717 2292 104 7 3 chr17 8722680 8722978 -76715502 - AluSx SINE Alu -13 299 1 1190 283 212 39 chr17 8722978 8723150 -76715330 - L1ME3A LINE L1 -2709 3717 3576 1107 149 0 12 chr17 8723150 8723318 -76715162 - FAM SINE Alu -9 166 1 1190 283 212 39 chr17 8723318 8723621 -76714859 - L1ME3A LINE L1 -2850 3576 3327 1975 145 20 3 chr17 8723621 8723924 -76714556 - AluSx SINE Alu -4 308 1 1190 283 212 39 chr17 8723924 8724262 -76714218 - L1ME3A LINE L1 -3099 3327 2508 2423 87 6 6 chr17 8724269 8724580 -76713900 + AluSx SINE Alu 1 311 -1 460 258 91 67 chr17 8724609 8724886 -76713594 - L1MCa LINE L1 -3948 2478 2227 660 91 0 0 chr17 8724915 8725003 -76713477 + AluSg/x SINE Alu 217 304 -5 658 298 70 66 chr17 8725062 8725502 -76712978 - L1M4 LINE L1 -1218 4928 4487 4123 168 29 50 chr17 8725528 8725798 -76712682 - L1MB8 LINE L1 -1 6177 5903 2340 90 16 19 chr17 8725798 8726109 -76712371 - AluSg SINE Alu 0 310 1 4123 168 29 50 chr17 8726109 8726179 -76712301 - L1MB8 LINE L1 -275 5903 5833 2583 63 0 0 chr17 8726179 8726478 -76712002 - AluY SINE Alu -12 299 1 4123 168 29 50 chr17 8726478 8727192 -76711288 - L1MB8 LINE L1 -345 5833 5155 2237 121 3 13 chr17 8727192 8727506 -76710974 - AluSx SINE Alu -1 311 1 4123 168 29 50 chr17 8727506 8727752 -76710728 - L1MB8 LINE L1 -1023 5155 4905 316 314 131 48 chr17 8727764 8728239 -76710241 - L1M4 LINE L1 -1782 4364 3851 1514 249 77 56 chr17 8728367 8729047 -76709433 + Charlie8 DNA MER1_type 1 694 -1723 313 216 157 147 chr17 8729721 8729810 -76708670 - L1M4 LINE L1 -2326 3820 3733 2211 105 3 3 chr17 8729810 8730142 -76708338 - AluSq SINE Alu 0 332 1 313 216 157 147 chr17 8730142 8730255 -76708225 - L1M4 LINE L1 -2413 3733 3615 1302 187 46 51 chr17 8730290 8730647 -76707833 - L1MD3 LINE L1 0 7995 7638 1245 169 72 41 chr17 8730647 8730937 -76707543 - AluJo SINE Alu -3 309 11 1401 163 71 44 chr17 8730654 8730948 -76707532 - AluJo SINE Alu 0 302 1 1302 187 46 51 chr17 8730948 8731159 -76707321 - L1MD3 LINE L1 -368 7627 7416 2123 110 0 0 chr17 8731159 8731451 -76707029 + AluSx SINE Alu 2 293 -19 1302 187 46 51 chr17 8731451 8731488 -76706992 - L1MD3 LINE L1 -579 7416 7380 1869 146 26 61 chr17 8731488 8731703 -76706777 - MLT1A1 LTR MaLR 0 365 167 2135 98 3 7 chr17 8731703 8731999 -76706481 - AluSc SINE Alu -14 295 1 1869 146 26 61 chr17 8731999 8732161 -76706319 - MLT1A1 LTR MaLR -198 167 1 1302 187 46 51 chr17 8732161 8732209 -76706271 - L1MD3 LINE L1 -615 7380 7333 2230 95 7 0 chr17 8732209 8732503 -76705977 - AluSx SINE Alu -16 296 1 1302 187 46 51 chr17 8732503 8733298 -76705182 - L1MD3 LINE L1 -662 7333 6366 192 40 0 0 chr17 8733341 8733366 -76705114 + (T)n Simple_repeat Simple_repeat 1 25 0 2496 123 31 39 chr17 8733379 8733613 -76704867 - MSTA LTR MaLR 0 428 197 2136 110 0 0 chr17 8733613 8733905 -76704575 - AluSc SINE Alu -17 292 1 2496 123 31 39 chr17 8733905 8734085 -76704395 - MSTA LTR MaLR -231 197 17 1792 172 28 53 chr17 8734093 8734530 -76703950 - L1MC4a LINE L1 -1481 6327 5902 258 244 79 43 chr17 8734546 8734710 -76703770 - L1M4 LINE L1 -2555 3591 3422 316 262 50 64 chr17 8734754 8734895 -76703585 - HAL1 LINE L1 -1202 1305 1167 771 187 0 0 chr17 8735430 8735553 -76702927 + FLAM_C SINE Alu 1 123 -20 414 0 0 0 chr17 8735554 8735600 -76702880 + (TAA)n Simple_repeat Simple_repeat 1 46 0 476 115 90 0 chr17 8735613 8735691 -76702789 + FRAM SINE Alu 46 130 -46 4095 194 29 18 chr17 8735723 8736620 -76701860 - L1ME3 LINE L1 -2 6160 5254 495 267 294 19 chr17 8736641 8737176 -76701304 - L2 LINE L2 -880 2434 1753 215 268 18 0 chr17 8738231 8738287 -76700193 - MIR SINE MIR -110 152 96 2454 49 10 0 chr17 8738638 8738943 -76699537 + AluSc SINE Alu 1 308 -1 261 0 0 0 chr17 8740078 8740107 -76698373 + (TG)n Simple_repeat Simple_repeat 1 29 0 252 272 120 68 chr17 8740561 8740697 -76697783 + MIR SINE MIR 26 188 -74 1794 153 3 3 chr17 8740697 8741000 -76697480 - AluJo SINE Alu 0 303 1 252 272 120 68 chr17 8741000 8741072 -76697408 + MIR SINE MIR 188 255 -7 827 163 0 0 chr17 8741435 8741582 -76696898 + FRAM SINE Alu 29 175 -1 847 180 58 17 chr17 8741960 8742132 -76696348 + FRAM SINE Alu 1 172 -4 681 166 0 126 chr17 8742316 8742515 -76695965 + MER104 DNA MER2_type 4 177 -3 508 224 303 0 chr17 8742855 8743020 -76695460 - MIR SINE MIR -33 229 15 2120 108 0 9 chr17 8743440 8743756 -76694724 - AluSq SINE Alu 0 313 1 293 286 40 16 chr17 8743876 8744002 -76694478 + L2 LINE L2 2925 3053 -219 295 281 7 89 chr17 8744410 8744556 -76693924 + MIR3 SINE MIR 61 194 -14 * 645 326 47 47 chr17 8744555 8744834 -76693646 - L2 LINE L2 0 3272 2994 198 0 0 0 chr17 8745668 8745690 -76692790 + (CA)n Simple_repeat Simple_repeat 1 22 0 2254 99 3 0 chr17 8746052 8746364 -76692116 + AluSp SINE Alu 1 313 0 451 303 50 48 chr17 8746555 8746812 -76691668 - L1M4 LINE L1 -2157 3989 3729 1705 98 117 0 chr17 8746812 8747077 -76691403 - AluSq SINE Alu -13 300 5 451 303 50 48 chr17 8747077 8747198 -76691282 - L1M4 LINE L1 -2417 3729 3610 696 319 99 28 chr17 8747483 8747878 -76690602 + L3 LINE CR1 1042 1464 -113 1689 133 0 22 chr17 8748926 8749196 -76689284 - AluJb SINE Alu -7 305 42 277 224 102 31 chr17 8749752 8749850 -76688630 + L2 LINE L2 3207 3311 -2 2220 106 0 3 chr17 8750152 8750455 -76688025 - AluSq SINE Alu -10 303 2 273 119 0 0 chr17 8751009 8751051 -76687429 + (T)n Simple_repeat Simple_repeat 1 42 0 1665 259 57 136 chr17 8752872 8753315 -76685165 - MLT1J LTR MaLR -38 473 1 2524 141 15 0 chr17 8753429 8753834 -76684646 + L1MB3 LINE L1 5723 6133 -50 5417 126 14 5 chr17 8753855 8754776 -76683704 + L1PA16 LINE L1 5202 6166 0 227 176 0 0 chr17 8754771 8754822 -76683658 + L1MB3 LINE L1 6127 6177 -6 * 484 296 182 76 chr17 8754830 8755202 -76683278 - L3 LINE CR1 -945 632 301 2126 94 52 10 chr17 8755202 8755511 -76682969 - L1PB1 LINE L1 -2 6149 5828 484 296 182 76 chr17 8755511 8755564 -76682916 - L3 LINE CR1 -1276 301 255 203 32 65 0 chr17 8755564 8755595 -76682885 + (TCTCTG)n Simple_repeat Simple_repeat 2 34 0 484 296 182 76 chr17 8755595 8755684 -76682796 - L3 LINE CR1 -1322 255 62 230 410 37 4 chr17 8755761 8756034 -76682446 + L2 LINE L2 2649 2930 -384 1067 267 81 21 chr17 8756218 8756652 -76681828 - L1ME LINE L1 -427 5743 5284 292 221 26 39 chr17 8756709 8756786 -76681694 + L2 LINE L2 3237 3312 -1 2451 71 0 0 chr17 8757038 8757348 -76681132 - AluY SINE Alu -1 310 1 418 234 184 58 chr17 8758103 8758364 -76680116 - L2 LINE L2 -100 3213 2920 196 300 0 0 chr17 8758559 8758609 -76679871 + L3 LINE CR1 1523 1572 -5 1478 217 33 24 chr17 8758923 8759460 -76679020 - MLT1G LTR MaLR 0 590 7 232 338 0 0 chr17 8760546 8760620 -76677860 - MIR3 SINE MIR -5 203 130 3048 104 15 75 chr17 8760692 8761222 -76677258 + L1PA14 LINE L1 5664 6161 0 2202 97 0 7 chr17 8761311 8761619 -76676861 - AluSg SINE Alu -4 306 1 1747 136 0 79 chr17 8761715 8762045 -76676435 + AluJo SINE Alu 1 304 -8 240 35 0 0 chr17 8762120 8762149 -76676331 + (TG)n Simple_repeat Simple_repeat 1 29 0 2496 52 0 3 chr17 8762204 8762513 -76675967 + AluY SINE Alu 1 308 -3 2180 110 7 0 chr17 8764249 8764559 -76673921 + AluSq SINE Alu 1 312 -1 182 250 50 0 chr17 8764791 8764831 -76673649 - MIR SINE MIR -59 149 108 1932 209 53 9 chr17 8765371 8765820 -76672660 + Charlie4a DNA MER1_type 39 507 -1 336 281 58 16 chr17 8765872 8765993 -76672487 + MIR SINE MIR 28 153 -109 2037 184 13 0 chr17 8766352 8766737 -76671743 + L1MB7 LINE L1 5779 6168 -16 5175 227 42 28 chr17 8766737 8766999 -76671481 + L1M4 LINE L1 3297 3554 -2592 2033 101 0 4 chr17 8766999 8767275 -76671205 + AluSq SINE Alu 1 275 -38 5175 227 42 28 chr17 8767275 8768446 -76670034 + L1M4 LINE L1 3554 4750 -1396 2880 142 39 26 chr17 8768467 8769011 -76669469 + L1MC2 LINE L1 5780 6330 -14 2362 67 0 0 chr17 8769039 8769337 -76669143 - AluY SINE Alu -13 298 1 3593 227 58 61 chr17 8770389 8771651 -76666829 - L1MCa LINE L1 -1343 5197 3940 343 256 67 0 chr17 8771663 8771753 -76666727 - L1MEc LINE L1 -4684 1712 1617 181 233 0 23 chr17 8771773 8771816 -76666664 - L3b LINE CR1 -413 1170 1129 365 210 84 8 chr17 8771817 8771936 -76666544 - L1ME2 LINE L1 -19 6145 6018 1557 252 65 76 chr17 8771938 8772575 -76665905 - L1MEc LINE L1 -4759 1637 1013 2209 103 0 3 chr17 8772575 8772875 -76665605 + AluSx SINE Alu 1 299 -13 1557 252 65 76 chr17 8772875 8773228 -76665252 - L1MEc LINE L1 -5383 1013 658 517 356 18 12 chr17 8773447 8773776 -76664704 - L1MEc LINE L1 -6012 384 54 3481 166 8 13 chr17 8773988 8774625 -76663855 - L1MD1 LINE L1 0 6242 5609 3258 198 41 30 chr17 8774625 8775139 -76663341 - L1MCa LINE L1 -3117 3423 2916 2143 159 0 3 chr17 8775139 8775504 -76662976 - L1PB3 LINE L1 -1 6153 5790 3258 198 41 30 chr17 8775504 8776805 -76661675 - L1MCa LINE L1 -3624 2916 1544 343 155 0 124 chr17 8776849 8776946 -76661534 - L1MCa LINE L1 -4949 1591 1507 1843 178 52 42 chr17 8776993 8777402 -76661078 - MSTB1 LTR MaLR -4 419 17 3493 196 83 11 chr17 8777425 8778171 -76660309 - L1MCa LINE L1 -5712 828 29 24 0 0 0 chr17 8778175 8778199 -76660281 + AT_rich Low_complexity Low_complexity 1 24 0 33 43 0 0 chr17 8778230 8778277 -76660203 + AT_rich Low_complexity Low_complexity 1 47 0 2401 113 8 8 chr17 8778339 8778693 -76659787 + THE1A LTR MaLR 1 354 -1 548 261 234 3 chr17 8778787 8779283 -76659197 + L2 LINE L2 1757 2415 -899 950 73 46 5 chr17 8779540 8780096 -76658384 + (TCTA)n Simple_repeat Simple_repeat 1 578 0 1829 138 3 3 chr17 8780740 8781022 -76657458 + AluJb SINE Alu 11 292 -20 359 100 33 0 chr17 8781022 8781082 -76657398 + G-rich Low_complexity Low_complexity 1 62 0 467 155 0 0 chr17 8781120 8781191 -76657289 + AluJ/FRAM SINE Alu 217 287 -25 381 93 0 0 chr17 8781191 8781245 -76657235 + (GGGGA)n Simple_repeat Simple_repeat 1 54 0 609 210 101 0 chr17 8781638 8781776 -76656704 + MIR SINE MIR 111 262 0 259 325 132 10 chr17 8781846 8782043 -76656437 + MIR SINE MIR 34 254 -8 232 97 0 0 chr17 8782774 8782805 -76655675 + THE1-int LTR MaLR 551 581 -999 186 238 0 0 chr17 8782859 8782901 -76655579 + L2 LINE L2 3210 3251 -21 375 182 0 0 chr17 8782904 8782981 -76655499 + CT-rich Low_complexity Low_complexity 2 78 0 1329 182 48 9 chr17 8783015 8783350 -76655130 - L1M4 LINE L1 -830 5316 4969 437 290 158 22 chr17 8783352 8783624 -76654856 - L1M4 LINE L1 -1607 4539 4231 * 497 314 48 74 chr17 8783619 8783968 -76654512 + HAL1b LINE L1 464 821 -3204 2493 93 3 0 chr17 8783968 8784280 -76654200 + AluSq SINE Alu 1 313 0 497 314 48 74 chr17 8784280 8784511 -76653969 + HAL1b LINE L1 821 3483 -542 427 244 15 46 chr17 8784622 8784753 -76653727 + MIR3 SINE MIR 53 179 -29 2317 98 23 0 chr17 8784925 8785230 -76653250 + AluSx SINE Alu 1 312 0 224 122 24 0 chr17 8785237 8785278 -76653202 + GA-rich Low_complexity Low_complexity 2 43 0 6330 193 31 85 chr17 8785812 8787218 -76651262 - L1MC4a LINE L1 -62 7746 6464 2351 121 0 0 chr17 8787218 8787525 -76650955 - AluSx SINE Alu -5 307 1 6330 193 31 85 chr17 8787525 8787985 -76650495 - L1MC4a LINE L1 -1344 6464 5981 23 0 0 0 chr17 8788613 8788636 -76649844 + GC_rich Low_complexity Low_complexity 1 23 0 2144 87 36 4 chr17 8789674 8789951 -76648529 - AluSx SINE Alu -9 303 18 488 190 10 10 chr17 8790079 8790179 -76648301 + MIR SINE MIR 39 138 -124 308 264 22 11 chr17 8790823 8790914 -76647566 + MIR3 SINE MIR 90 181 -27 2247 113 0 16 chr17 8791373 8791684 -76646796 - AluSx SINE Alu -6 306 1 355 346 86 40 chr17 8791811 8792138 -76646342 + L2 LINE L2 2911 3252 -20 607 304 22 6 chr17 8792617 8792798 -76645682 - MIR SINE MIR -72 190 7 561 204 102 7 chr17 8794321 8794468 -76644012 + L2 LINE L2 2896 3056 -257 466 273 61 69 chr17 8794464 8794695 -76643785 + MIR SINE MIR 28 256 -6 * 228 203 14 54 chr17 8794711 8794785 -76643695 - MER69 DNA AcHobo -9 2517 2447 * 628 252 21 7 chr17 8794779 8794922 -76643558 - MER69 DNA AcHobo -1079 147 3 2452 72 3 0 chr17 8795522 8795812 -76642668 + AluSc SINE Alu 1 291 -18 441 0 0 0 chr17 8796535 8796584 -76641896 + (TG)n Simple_repeat Simple_repeat 2 50 0 381 262 74 125 chr17 8797048 8797177 -76641303 + L1ME LINE L1 5339 5473 -648 1929 146 11 4 chr17 8797177 8797457 -76641023 + AluJo SINE Alu 1 282 -30 381 262 74 125 chr17 8797457 8797785 -76640695 + L1ME LINE L1 5473 5770 -351 2241 102 0 33 chr17 8797785 8798089 -76640391 + AluSc SINE Alu 2 295 -14 381 262 74 125 chr17 8798089 8798142 -76640338 + L1ME LINE L1 5770 5824 -297 1421 129 0 0 chr17 8798327 8798513 -76639967 - AluSx SINE Alu -124 188 3 374 330 58 17 chr17 8798593 8798766 -76639714 + L1M4 LINE L1 5120 5299 -847 2217 38 7 7 chr17 8798840 8799129 -76639351 + L1PA8 LINE L1 5884 6172 0 495 338 87 10 chr17 8799596 8799895 -76638585 + MARNA DNA Mariner 90 411 -175 268 298 10 19 chr17 8799919 8800023 -76638457 + MARNA DNA Mariner 331 433 -153 232 217 11 43 chr17 8801091 8801183 -76637297 + L1ME4a LINE L1 3876 3964 -2182 1021 347 71 56 chr17 8801449 8802076 -76636404 + L1ME4a LINE L1 4330 4946 -1200 2317 94 3 28 chr17 8802076 8802395 -76636085 + AluSq SINE Alu 1 311 -2 1021 347 71 56 chr17 8802395 8802671 -76635809 + L1ME4a LINE L1 4946 5252 -894 2374 96 7 0 chr17 8802671 8802974 -76635506 + AluSc SINE Alu 1 305 -4 1021 347 71 56 chr17 8802974 8803055 -76635425 + L1ME4a LINE L1 5252 5330 -816 323 221 49 57 chr17 8803086 8803208 -76635272 + L1ME4a LINE L1 5385 5505 -616 456 284 84 38 chr17 8803227 8803547 -76634933 + L1ME4a LINE L1 5593 5927 -194 798 248 112 61 chr17 8804798 8805173 -76633307 - LTR37B LTR ERV1 -9 459 66 2478 82 0 0 chr17 8805173 8805465 -76633015 - AluSg SINE Alu -18 292 1 475 297 51 11 chr17 8805583 8805758 -76632722 + MIR SINE MIR 6 187 -75 276 228 127 0 chr17 8806420 8806499 -76631981 + MIR SINE MIR 65 153 -109 452 232 45 0 chr17 8806579 8806722 -76631758 - MIR SINE MIR -63 145 42 692 287 52 45 chr17 8807171 8807253 -76631227 - MLT1J LTR MaLR -3 508 428 341 58 19 0 chr17 8807253 8807305 -76631175 + (CA)n Simple_repeat Simple_repeat 2 54 0 692 287 52 45 chr17 8807305 8807490 -76630990 - MLT1J LTR MaLR -83 428 239 248 261 171 9 chr17 8807515 8807626 -76630854 - MLT1J LTR MaLR -382 129 1 373 216 182 57 chr17 8811049 8811225 -76627255 - MIR3 SINE MIR -8 200 3 434 246 49 8 chr17 8811915 8812037 -76626443 - MIR SINE MIR -116 146 20 241 233 33 0 chr17 8812067 8812127 -76626353 + MER112 DNA MER1_type 1 62 -198 297 0 0 0 chr17 8812131 8812164 -76626316 + (CA)n Simple_repeat Simple_repeat 2 34 0 322 287 155 0 chr17 8812167 8812296 -76626184 + MER112 DNA MER1_type 105 253 -7 416 224 140 9 chr17 8812649 8812756 -76625724 - MIR SINE MIR -36 226 106 245 322 83 17 chr17 8813122 8813302 -76625178 + L1MC5 LINE L1 7722 7913 -48 2404 74 0 29 chr17 8813307 8813619 -76624861 + AluY SINE Alu 1 303 -8 181 281 18 79 chr17 8814727 8814841 -76623639 + MIR SINE MIR 19 125 -83 474 279 60 71 chr17 8815289 8815670 -76622810 - MLT1J LTR MaLR -94 417 1 292 261 72 0 chr17 8815671 8815782 -76622698 - MIR SINE MIR -76 186 68 232 341 92 12 chr17 8815797 8815961 -76622519 + MIR3 SINE MIR 9 185 -23 267 79 0 0 chr17 8816384 8816422 -76622058 + (GGA)n Simple_repeat Simple_repeat 2 39 0 2057 115 0 28 chr17 8817150 8817496 -76620984 - AluSx SINE Alu 0 342 5 187 298 88 51 chr17 8820855 8821070 -76617410 - L2 LINE L2 -7 3306 3084 927 307 95 58 chr17 8821141 8821636 -76616844 - L2 LINE L2 -21 3251 2776 2201 118 3 3 chr17 8821636 8821942 -76616538 - AluSg SINE Alu -4 306 1 927 307 95 58 chr17 8821942 8822765 -76615715 - L2 LINE L2 -496 2776 1893 222 236 0 0 chr17 8823446 8823501 -76614979 + (TG)n Simple_repeat Simple_repeat 1 55 0 254 231 0 19 chr17 8824893 8824945 -76613535 + (CACG)n Simple_repeat Simple_repeat 1 51 0 231 317 108 36 chr17 8825104 8825271 -76613209 + MIR SINE MIR 77 255 -7 720 198 198 12 chr17 8827067 8827320 -76611160 + L1MD3 LINE L1 7526 7825 -170 285 29 0 0 chr17 8827329 8827363 -76611117 + (CA)n Simple_repeat Simple_repeat 2 35 0 266 225 59 70 chr17 8827372 8827559 -76610921 + L1MCa LINE L1 1441 1625 -4801 2445 60 0 0 chr17 8827615 8827921 -76610559 + AluY SINE Alu 1 306 0 516 203 23 170 chr17 8827925 8828442 -76610038 + L1MCa LINE L1 2500 2940 -3486 1870 94 0 12 chr17 8828442 8828687 -76609793 - AluSx SINE Alu -68 244 3 4164 35 8 4 chr17 8829608 8830129 -76608351 + LTR6B LTR ERV1 1 523 -35 506 60 5 2 chr17 8830330 8830401 -76608079 + LTR6B LTR ERV1 492 558 0 909 207 57 37 chr17 8831267 8831513 -76606967 - MIR SINE MIR -10 252 2 369 211 38 53 chr17 8832010 8832159 -76606321 - MIR3 SINE MIR -23 185 37 330 169 0 0 chr17 8832180 8832245 -76606235 + (TG)n Simple_repeat Simple_repeat 1 65 0 2284 123 0 0 chr17 8833065 8833375 -76605105 - AluSx SINE Alu -2 310 1 304 226 0 16 chr17 8833650 8833712 -76604768 - MER5A DNA MER1_type -128 61 1 204 376 55 28 chr17 8835662 8835771 -76602709 - L2 LINE L2 -65 3207 3096 526 162 46 104 chr17 8835950 8836123 -76602357 - MLT1K LTR MaLR -9 579 417 605 301 201 32 chr17 8836558 8837116 -76601364 - L2 LINE L2 -413 2901 2250 439 266 59 42 chr17 8837826 8838014 -76600466 - MIR SINE MIR -58 204 18 2090 107 7 17 chr17 8838471 8838770 -76599710 - AluY SINE Alu -15 296 1 516 222 32 16 chr17 8838789 8838915 -76599565 - MIR SINE MIR -45 217 90 2518 69 0 3 chr17 8840189 8840495 -76597985 + AluSc SINE Alu 1 305 -4 1602 224 120 21 chr17 8840554 8840988 -76597492 - LTR40a LTR ERVL -42 477 1 770 218 92 187 chr17 8840988 8841191 -76597289 + L2 LINE L2 2843 3064 -249 2376 59 3 10 chr17 8841191 8841481 -76596999 + AluSc SINE Alu 1 288 -21 770 218 92 187 chr17 8841481 8841497 -76596983 + L2 LINE L2 3064 3080 -233 1564 163 23 10 chr17 8841497 8841798 -76596682 + L1MA7 LINE L1 5987 6291 0 770 218 92 187 chr17 8841798 8842096 -76596384 + L2 LINE L2 3080 3312 -1 506 266 35 35 chr17 8842698 8842841 -76595639 - L2 LINE L2 0 3313 3171 2119 148 16 11 chr17 8842850 8843216 -76595264 - MER44D DNA MER2_type -2 603 364 228 278 0 0 chr17 8843215 8843269 -76595211 + MER44D DNA MER2_type 639 564 -41 * 2088 207 0 0 chr17 8843256 8843633 -76594847 - MER44D DNA MER2_type -328 377 1 2298 85 51 0 chr17 8843813 8844108 -76594372 - AluSg SINE Alu 0 310 1 779 199 47 31 chr17 8844241 8844432 -76594048 - Charlie8 DNA MER1_type -2170 247 54 1832 137 11 85 chr17 8844466 8844568 -76593912 - MER1B DNA MER1_type -2373 337 229 222 62 0 0 chr17 8844568 8844600 -76593880 + (CTGGGG)n Simple_repeat Simple_repeat 3 34 0 1832 137 11 85 chr17 8844600 8844861 -76593619 - MER1B DNA MER1_type -2481 229 1 2542 174 28 58 chr17 8845041 8845577 -76592903 - MLT2B1 LTR ERVL 0 520 1 188 372 23 12 chr17 8845707 8845793 -76592687 + L2 LINE L2 3151 3237 -35 2366 69 16 7 chr17 8846411 8846716 -76591764 + AluSq SINE Alu 1 308 -5 202 208 151 0 chr17 8846972 8847025 -76591455 + L2 LINE L2 3209 3269 -3 1989 106 11 4 chr17 8847096 8847370 -76591110 - AluSq SINE Alu -1 312 37 200 343 15 0 chr17 8847643 8847710 -76590770 + MIR SINE MIR 44 111 -97 * 814 292 101 36 chr17 8847709 8848065 -76590415 - L2 LINE L2 -1 3312 2934 875 187 32 41 chr17 8848336 8848404 -76590076 + L1MD2 LINE L1 6143 6210 -149 2184 126 3 0 chr17 8848404 8848706 -76589774 - AluSq SINE Alu -10 303 1 875 187 32 41 chr17 8848706 8848856 -76589624 + L1MD2 LINE L1 6210 6359 0 2552 293 25 49 chr17 8848877 8849321 -76589159 - L1ME1 LINE L1 -196 5970 5517 892 54 0 0 chr17 8849321 8849432 -76589048 + L1PA7 LINE L1 6044 6154 0 2552 293 25 49 chr17 8849432 8849752 -76588728 - L1ME1 LINE L1 -649 5517 5191 2172 131 3 10 chr17 8849752 8850114 -76588366 - AluSx SINE Alu 0 312 1 2552 293 25 49 chr17 8850114 8850579 -76587901 - L1ME1 LINE L1 -975 5191 4717 1935 114 4 0 chr17 8850579 8850834 -76587646 + AluSg SINE Alu 1 256 -54 2552 293 25 49 chr17 8850834 8851032 -76587448 - L1ME1 LINE L1 -1449 4717 4516 2269 108 0 3 chr17 8851032 8851328 -76587152 - AluSc SINE Alu -14 295 1 2552 293 25 49 chr17 8851328 8851484 -76586996 - L1ME1 LINE L1 -1650 4516 4428 2237 98 0 0 chr17 8851484 8851802 -76586678 - AluY SINE Alu 0 322 5 2552 293 25 49 chr17 8851802 8851855 -76586625 - L1ME1 LINE L1 -1738 4428 4375 607 275 93 55 chr17 8851887 8852256 -76586224 - L1ME LINE L1 -297 5824 5436 2350 95 0 3 chr17 8852256 8852552 -76585928 - AluSg SINE Alu -15 295 1 607 275 93 55 chr17 8852552 8852600 -76585880 - L1ME LINE L1 -685 5436 5391 3746 152 3 23 chr17 8852697 8853360 -76585120 - L1MB4 LINE L1 0 6180 5531 272 114 0 0 chr17 8853432 8853476 -76585004 - L1MB4 LINE L1 -660 5523 5480 221 53 53 0 chr17 8853476 8853514 -76584966 + T-rich Low_complexity Low_complexity 1 40 0 2362 50 4 4 chr17 8853515 8853794 -76584686 - AluY SINE Alu -32 279 1 180 97 0 0 chr17 8853796 8853827 -76584653 + (T)n Simple_repeat Simple_repeat 1 31 0 300 323 43 18 chr17 8853876 8854040 -76584440 - L1ME1 LINE L1 -2456 3690 3523 851 251 21 41 chr17 8854436 8854679 -76583801 + MIR SINE MIR 15 252 -10 2261 105 16 3 chr17 8854682 8854988 -76583492 - AluSq SINE Alu -3 310 1 674 345 26 0 chr17 8855504 8855733 -76582747 - MIR SINE MIR -5 257 23 667 247 6 41 chr17 8855768 8855938 -76582542 - MIR SINE MIR -83 179 16 228 35 0 0 chr17 8856150 8856179 -76582301 + (TCCA)n Simple_repeat Simple_repeat 2 30 0 1598 174 113 10 chr17 8856329 8856640 -76581840 + MER7A DNA MER2_type 1 341 -5 2298 101 0 7 chr17 8857192 8857490 -76580990 - AluSx SINE Alu -16 296 1 243 225 11 90 chr17 8857828 8857917 -76580563 + MIR SINE MIR 131 212 -50 339 257 30 0 chr17 8857931 8858032 -76580448 - MLT1J2 LTR MaLR -4 446 343 607 207 75 27 chr17 8858064 8858252 -76580228 - MLT1J2 LTR MaLR -239 211 15 5442 145 18 35 chr17 8858319 8859046 -76579434 + L1PA16 LINE L1 4427 5165 -1001 2054 138 34 0 chr17 8859046 8859344 -76579136 - AluSx SINE Alu -4 308 1 5442 145 18 35 chr17 8859344 8860382 -76578098 + L1PA16 LINE L1 5165 6160 -6 34 24 0 0 chr17 8860382 8860423 -76578057 + AT_rich Low_complexity Low_complexity 1 41 0 916 273 27 30 chr17 8861103 8861436 -76577044 - MER102b DNA MER1_type 0 341 10 247 143 18 18 chr17 8861676 8861732 -76576748 + GA-rich Low_complexity Low_complexity 4 59 0 304 273 12 31 chr17 8864248 8864409 -76574071 + G-rich Low_complexity Low_complexity 5 162 0 597 136 27 20 chr17 8864434 8864581 -76573899 + GA-rich Low_complexity Low_complexity 1 148 0 372 282 24 40 chr17 8864800 8864924 -76573556 + L2 LINE L2 3146 3267 -5 428 248 41 33 chr17 8865849 8865970 -76572510 - AluJo SINE Alu -70 242 121 375 274 34 8 chr17 8866120 8866237 -76572243 - L1ME LINE L1 -440 5722 5603 2255 111 7 0 chr17 8866314 8866621 -76571859 + AluSp SINE Alu 1 309 -4 1551 164 45 16 chr17 8866736 8867047 -76571433 + L1MA9 LINE L1 5993 6312 0 22 56 0 0 chr17 8868677 8868713 -76569767 + GC_rich Low_complexity Low_complexity 1 36 0 1255 129 0 6 chr17 8870411 8870589 -76567891 - AluSg/x SINE Alu -12 298 122 270 0 0 0 chr17 8870590 8870620 -76567860 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 2302 88 3 0 chr17 8870620 8870904 -76567576 - AluSx SINE Alu -27 285 1 275 256 24 80 chr17 8871572 8871697 -76566783 - MARNA DNA Mariner -13 573 456 562 292 73 19 chr17 8871712 8871972 -76566508 + MARNA DNA Mariner 193 466 -120 450 258 78 8 chr17 8872130 8872258 -76566222 + MIR SINE MIR 9 145 -117 2199 110 10 3 chr17 8872261 8872569 -76565911 + AluSx SINE Alu 1 310 -2 23 33 0 0 chr17 8872570 8872600 -76565880 + AT_rich Low_complexity Low_complexity 1 30 0 192 243 0 0 chr17 8873225 8873299 -76565181 + C-rich Low_complexity Low_complexity 1 74 0 265 38 0 57 chr17 8873400 8873453 -76565027 + AluY SINE Alu 251 300 0 1150 292 181 35 chr17 8873487 8873725 -76564755 + L1 LINE L1 4281 4483 -1663 2348 101 13 3 chr17 8873725 8874033 -76564447 + AluSx SINE Alu 1 311 -1 1150 292 181 35 chr17 8874033 8874756 -76563724 + L1 LINE L1 4483 5382 -764 488 277 97 59 chr17 8874876 8875382 -76563098 - L1ME4a LINE L1 -215 5906 5382 435 369 110 19 chr17 8875437 8875800 -76562680 - L1ME4a LINE L1 -865 5281 4886 1913 164 0 19 chr17 8876853 8877171 -76561309 - AluJo SINE Alu 0 312 1 419 305 17 42 chr17 8877887 8878064 -76560416 + MIR SINE MIR 24 196 -62 432 55 0 0 chr17 8878543 8878598 -76559882 + (TCCA)n Simple_repeat Simple_repeat 1 55 0 346 278 152 63 chr17 8878601 8878903 -76559577 - L2 LINE L2 -12 3260 2932 233 234 0 32 chr17 8879658 8879752 -76558728 + G-rich Low_complexity Low_complexity 3 93 0 630 270 98 14 chr17 8879938 8880153 -76558327 + MIR SINE MIR 30 262 0 1291 156 0 62 chr17 8880222 8880383 -76558097 - AluJb SINE Alu -18 294 149 2205 117 0 3 chr17 8880383 8880682 -76557798 - AluSq SINE Alu -15 298 1 1291 156 0 62 chr17 8880682 8880744 -76557736 - AluJb SINE Alu -163 149 85 1027 177 11 11 chr17 8880758 8880939 -76557541 - AluJo SINE Alu -12 300 120 503 331 62 0 chr17 8881029 8881207 -76557273 - MIR SINE MIR -42 220 32 2460 96 0 3 chr17 8881381 8881695 -76556785 + AluSp SINE Alu 1 313 0 501 300 69 55 chr17 8882085 8882575 -76555905 - L2 LINE L2 -386 2928 2432 309 278 220 57 chr17 8883167 8883536 -76554944 - L2 LINE L2 -1816 1498 1078 391 254 0 37 chr17 8883631 8883797 -76554683 - MER3 DNA MER1_type 0 209 5 2411 91 3 10 chr17 8884181 8884490 -76553990 - AluSq SINE Alu -6 307 1 185 0 0 39 chr17 8884494 8884520 -76553960 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 2261 124 0 6 chr17 8884836 8885150 -76553330 - AluSx SINE Alu 0 312 1 736 270 42 21 chr17 8885165 8885402 -76553078 - MIR SINE MIR -6 256 15 200 217 22 18 chr17 8885697 8885764 -76552716 + MIR SINE MIR 52 119 -89 442 205 34 17 chr17 8885882 8885999 -76552481 + AluSg/x SINE Alu 169 287 -22 1514 192 136 41 chr17 8886002 8886309 -76552171 + MLT1D LTR MaLR 20 383 -122 2943 171 4 17 chr17 8886309 8886840 -76551640 + MER1A DNA MER1_type 4 527 0 1514 192 136 41 chr17 8886840 8886974 -76551506 + MLT1D LTR MaLR 383 503 -2 293 283 57 9 chr17 8887593 8887699 -76550781 - MIR3 SINE MIR -7 201 91 381 283 26 53 chr17 8888362 8888514 -76549966 - L2 LINE L2 -243 3070 2923 1369 119 0 0 chr17 8888520 8888733 -76549747 - AluSg/x SINE Alu 0 315 103 306 241 65 0 chr17 8888754 8888846 -76549634 + MIR SINE MIR 57 153 -62 2188 113 0 13 chr17 8888979 8889280 -76549200 + AluSx SINE Alu 7 303 -9 21 36 0 0 chr17 8889281 8889309 -76549171 + AT_rich Low_complexity Low_complexity 1 28 0 1565 202 3 37 chr17 8889553 8889875 -76548605 + AluJo SINE Alu 1 311 -1 833 102 34 23 chr17 8889883 8890059 -76548421 + GA-rich Low_complexity Low_complexity 1 178 0 675 157 5 38 chr17 8890082 8890267 -76548213 + GA-rich Low_complexity Low_complexity 2 180 0 1515 167 38 71 chr17 8890404 8890700 -76547780 + L1MB8 LINE L1 5825 6108 -70 2181 101 30 3 chr17 8890700 8890998 -76547482 - AluSq SINE Alu -7 306 1 1515 167 38 71 chr17 8890998 8891066 -76547414 + L1MB8 LINE L1 6108 6177 -1 652 247 23 11 chr17 8891069 8891243 -76547237 - MIR SINE MIR -69 193 18 2157 93 32 39 chr17 8891446 8891758 -76546722 - AluSg SINE Alu 0 310 1 230 333 29 0 chr17 8892804 8892909 -76545571 - MIR3 SINE MIR -25 183 76 189 0 0 0 chr17 8892909 8892930 -76545550 + (TGGG)n Simple_repeat Simple_repeat 2 22 0 2269 96 6 16 chr17 8894438 8894752 -76543728 - AluSx SINE Alu -1 311 1 290 282 11 39 chr17 8895091 8895328 -76543152 + (CGGGG)n Simple_repeat Simple_repeat 1 230 0 212 333 9 9 chr17 8895369 8895474 -76543006 + G-rich Low_complexity Low_complexity 1 105 0 341 305 20 9 chr17 8896091 8896243 -76542237 - MIR SINE MIR -62 146 42 266 326 50 39 chr17 8896590 8896771 -76541709 - L3 LINE CR1 -7 1570 1388 512 241 176 6 chr17 8896998 8897168 -76541312 + MIR SINE MIR 8 206 -56 407 278 87 0 chr17 8897320 8897435 -76541045 + L1ME4a LINE L1 5803 5927 -194 298 267 38 0 chr17 8897439 8897544 -76540936 + L1ME4a LINE L1 5967 6075 -46 2357 78 34 7 chr17 8898104 8898399 -76540081 - AluSx SINE Alu -9 303 1 296 342 76 6 chr17 8898743 8898901 -76539579 - L3 LINE CR1 -310 1267 1099 180 0 0 0 chr17 8899074 8899094 -76539386 + (TA)n Simple_repeat Simple_repeat 2 21 0 2308 77 52 0 chr17 8899094 8899380 -76539100 - AluSx SINE Alu -11 301 1 340 244 122 9 chr17 8899385 8899500 -76538980 - L1ME LINE L1 -315 5806 5679 827 254 21 5 chr17 8899747 8899936 -76538544 + MER82 DNA MER2_type 1 192 -461 2122 97 0 0 chr17 8899939 8900198 -76538282 + AluSg SINE Alu 1 259 -51 327 279 0 0 chr17 8900222 8900301 -76538179 + Charlie4 DNA MER1_type 1880 1958 -3 288 0 0 0 chr17 8900719 8900751 -76537729 + (T)n Simple_repeat Simple_repeat 1 32 0 414 283 68 60 chr17 8900864 8900946 -76537534 + L1ME4a LINE L1 5351 5431 -690 2550 84 0 0 chr17 8900946 8901254 -76537226 - AluSg SINE Alu -2 308 1 414 283 68 60 chr17 8901254 8901422 -76537058 + L1ME4a LINE L1 5431 5603 -518 242 237 13 0 chr17 8901471 8901547 -76536933 + (TA)n Simple_repeat Simple_repeat 2 78 0 448 327 33 19 chr17 8901551 8901765 -76536715 + L1ME4a LINE L1 5610 5826 -295 310 266 90 90 chr17 8901777 8901954 -76536526 + L1ME4a LINE L1 5859 6035 -86 2287 92 6 29 chr17 8901954 8902270 -76536210 - AluSx SINE Alu -3 309 1 1634 211 13 0 chr17 8902305 8902603 -76535877 + AluJb SINE Alu 3 304 -8 594 164 0 9 chr17 8902641 8902769 -76535711 + L1MB3 LINE L1 5665 5786 -385 1957 138 10 10 chr17 8902770 8902904 -76535576 + AluSx SINE Alu 1 134 -178 2576 63 0 0 chr17 8902904 8903203 -76535277 + AluY SINE Alu 1 299 -12 1957 138 10 10 chr17 8903203 8903358 -76535122 + AluSx SINE Alu 133 290 -22 1542 145 0 9 chr17 8903372 8903599 -76534881 + AluSx SINE Alu 1 225 -87 230 27 0 0 chr17 8903602 8903639 -76534841 + Alu SINE Alu 130 166 0 1798 138 75 11 chr17 8903649 8903773 -76534707 + L1MB3 LINE L1 5769 5884 -299 1750 76 5 0 chr17 8903773 8903983 -76534497 + AluSx SINE Alu 2 212 -100 1798 138 75 11 chr17 8903983 8904207 -76534273 + L1MB3 LINE L1 5884 6139 -44 2147 86 10 17 chr17 8904209 8904510 -76533970 + AluSp SINE Alu 1 299 -14 2134 106 0 4 chr17 8905021 8905294 -76533186 - AluSx SINE Alu -40 272 1 1000 265 89 84 chr17 8905301 8905466 -76533014 - L1M4 LINE L1 -3056 3090 2927 1035 149 0 12 chr17 8905466 8905634 -76532846 - FAM SINE Alu -9 166 1 1000 265 89 84 chr17 8905634 8905969 -76532511 - L1M4 LINE L1 -3219 2927 2595 1957 138 23 7 chr17 8905969 8906273 -76532207 - AluSx SINE Alu -3 309 1 1000 265 89 84 chr17 8906273 8906618 -76531862 - L1M4 LINE L1 -3551 2595 2236 2398 93 6 6 chr17 8906618 8906930 -76531550 + AluSx SINE Alu 1 312 0 1000 265 89 84 chr17 8906930 8907037 -76531443 - L1M4 LINE L1 -3910 2236 2131 219 253 11 11 chr17 8907086 8907177 -76531303 + T-rich Low_complexity Low_complexity 6 96 0 620 92 0 0 chr17 8907256 8907343 -76531137 + Alu SINE Alu 220 306 -6 310 349 103 18 chr17 8907402 8907683 -76530797 - L1M4 LINE L1 -1218 4928 4624 223 274 119 0 chr17 8908450 8908534 -76529946 + MIR SINE MIR 56 149 -113 228 184 214 41 chr17 8908765 8908863 -76529617 - MIR3 SINE MIR -23 185 71 195 42 0 0 chr17 8908945 8908969 -76529511 + (CA)n Simple_repeat Simple_repeat 2 25 0 297 305 0 11 chr17 8909002 8909097 -76529383 - MER5A DNA MER1_type -89 100 7 297 308 17 33 chr17 8909935 8910055 -76528425 + L3 LINE CR1 1446 1563 -14 24 53 0 0 chr17 8912097 8912135 -76526345 + AT_rich Low_complexity Low_complexity 1 38 0 2401 91 0 0 chr17 8912706 8913003 -76525477 + AluSq SINE Alu 1 297 -16 739 272 89 4 chr17 8913301 8913536 -76524944 - MIR SINE MIR -4 258 4 2441 81 10 0 chr17 8914789 8915084 -76523396 + AluSp SINE Alu 1 298 -15 1904 168 3 13 chr17 8915112 8915410 -76523070 + AluJb SINE Alu 1 295 -17 272 299 0 0 chr17 8915481 8915548 -76522932 - L2 LINE L2 0 3272 3206 436 171 136 0 chr17 8915568 8915656 -76522824 - FLAM_A SINE Alu -41 101 2 938 209 133 4 chr17 8916222 8916447 -76522033 + MER82 DNA MER2_type 361 614 -39 2412 122 54 33 chr17 8916807 8917232 -76521248 + Tigger2a DNA MER2_type 1 434 0 1399 215 65 63 chr17 8917404 8917529 -76520951 + MLT1C LTR MaLR 6 129 -338 2335 82 3 10 chr17 8917529 8917832 -76520648 + AluSg SINE Alu 1 301 -9 1399 215 65 63 chr17 8917832 8918167 -76520313 + MLT1C LTR MaLR 129 467 0 2290 108 0 10 chr17 8918191 8918488 -76519992 + AluSx SINE Alu 1 294 -18 1170 272 58 21 chr17 8918671 8919337 -76519143 + L1ME3A LINE L1 5174 5862 -308 2376 107 0 0 chr17 8919589 8919899 -76518581 + AluSg SINE Alu 1 310 0 312 241 135 21 chr17 8920536 8920677 -76517803 + LTR67 LTR ERVL 401 557 0 1219 186 5 5 chr17 8920891 8921111 -76517369 - MER58A DNA MER1_type 0 224 5 219 319 165 16 chr17 8921685 8921873 -76516607 + MIR SINE MIR 33 248 -14 195 42 0 0 chr17 8921885 8921909 -76516571 + (ATG)n Simple_repeat Simple_repeat 3 26 0 2254 89 0 4 chr17 8921949 8922230 -76516250 + AluSx SINE Alu 1 280 -32 717 12 0 0 chr17 8922232 8922314 -76516166 + (GGAA)n Simple_repeat Simple_repeat 3 84 0 253 251 14 0 chr17 8922559 8922630 -76515850 + MIR SINE MIR 49 120 -88 531 205 0 27 chr17 8922672 8922784 -76515696 - MER5A DNA MER1_type -80 109 1 2621 44 10 0 chr17 8923450 8923745 -76514735 + AluY SINE Alu 1 298 -13 310 313 188 17 chr17 8923788 8923964 -76514516 + L3 LINE CR1 1020 1225 -352 2544 66 0 16 chr17 8925480 8925784 -76512696 - AluY SINE Alu -12 299 1 838 177 11 0 chr17 8925798 8925979 -76512501 + L1M4 LINE L1 5298 5480 -704 1682 188 22 4 chr17 8925985 8926296 -76512184 + AluJo SINE Alu 1 316 0 2297 75 7 0 chr17 8926296 8926617 -76511863 + AluSx SINE Alu 2 324 0 425 284 39 44 chr17 8926620 8926824 -76511656 + L2 LINE L2 2923 3125 -188 382 273 9 0 chr17 8927124 8927237 -76511243 + MER20B DNA MER1_type 81 197 -22 2548 80 3 0 chr17 8927267 8927579 -76510901 - AluSp SINE Alu 0 313 1 257 255 64 21 chr17 8928525 8928619 -76509861 - MIR SINE MIR -88 174 77 4141 165 57 25 chr17 8929273 8930080 -76508400 + MER21B LTR ERV1 1 833 -30 2277 114 0 3 chr17 8930842 8931149 -76507331 - AluSx SINE Alu -6 306 1 658 295 71 4 chr17 8931520 8931801 -76506679 + L3 LINE CR1 733 1032 -545 2152 130 10 0 chr17 8931884 8932184 -76506296 - AluSx SINE Alu -9 303 1 570 308 120 39 chr17 8932255 8932638 -76505842 + MLT1L LTR MaLR 171 584 -31 248 327 10 0 chr17 8932688 8932789 -76505691 + L3 LINE CR1 1066 1167 -410 988 103 0 0 chr17 8932932 8933058 -76505422 - AluSg/x SINE Alu -48 262 137 2266 86 17 0 chr17 8933432 8933733 -76504747 - AluY SINE Alu -5 306 1 752 287 88 35 chr17 8933891 8934344 -76504136 - MLT1J LTR MaLR -33 478 2 250 236 18 0 chr17 8934404 8934459 -76504021 + MIR SINE MIR 111 166 -96 509 221 30 8 chr17 8934539 8934670 -76503810 - L2 LINE L2 0 3313 3180 773 154 0 29 chr17 8935005 8935141 -76503339 + FLAM_A SINE Alu 1 132 -1 371 295 78 78 chr17 8935157 8935401 -76503079 - L2 LINE L2 -6 3266 3023 395 280 0 24 chr17 8935413 8935538 -76502942 + (CAT)n Simple_repeat Simple_repeat 2 123 0 375 212 15 15 chr17 8935564 8935701 -76502779 + (CACCAT)n Simple_repeat Simple_repeat 4 140 0 657 299 29 25 chr17 8935749 8935953 -76502527 - MIR SINE MIR -18 244 40 412 329 68 19 chr17 8936032 8936354 -76502126 - L2 LINE L2 -342 2972 2635 446 276 118 54 chr17 8937669 8937851 -76500629 - MIR SINE MIR -8 254 54 2218 95 7 0 chr17 8937851 8938155 -76500325 - AluSx SINE Alu -6 306 1 446 276 118 54 chr17 8938155 8938193 -76500287 - MIR SINE MIR -208 54 20 2456 68 0 3 chr17 8938268 8938578 -76499902 - AluY SINE Alu -2 309 1 2183 189 55 121 chr17 8938590 8939440 -76499040 - L1MC4a LINE L1 0 7811 7113 286 371 30 8 chr17 8939448 8939580 -76498900 - MER5A DNA MER1_type 0 189 55 2129 120 3 0 chr17 8939588 8939888 -76498592 + AluSx SINE Alu 2 302 -10 9771 95 31 33 chr17 8939888 8940547 -76497933 + Tigger1 DNA MER2_type 951 1610 -808 2237 89 0 3 chr17 8940547 8940850 -76497630 + AluSq SINE Alu 1 302 -11 9771 95 31 33 chr17 8940850 8941657 -76496823 + Tigger1 DNA MER2_type 1610 2414 -4 1716 188 23 53 chr17 8941661 8941727 -76496753 - L1M4 LINE L1 -538 5646 5580 1802 178 3 0 chr17 8941727 8942036 -76496444 - AluJb SINE Alu 0 312 3 1716 188 23 53 chr17 8942036 8942512 -76495968 - L1M4 LINE L1 -604 5580 5122 799 269 20 20 chr17 8942607 8942953 -76495527 - L1M4 LINE L1 -2768 3378 3033 2141 104 0 3 chr17 8944011 8944308 -76494172 + AluSx SINE Alu 5 300 -12 283 295 74 68 chr17 8944332 8944664 -76493816 + L1 LINE L1 2831 3159 -2987 2159 93 3 13 chr17 8944664 8944965 -76493515 + AluSp SINE Alu 2 299 -14 283 295 74 68 chr17 8944965 8945021 -76493459 + L1 LINE L1 3159 3213 -2933 348 273 91 59 chr17 8945021 8945274 -76493206 + MIR SINE MIR 2 262 0 283 295 74 68 chr17 8945274 8945741 -76492739 + L1 LINE L1 3213 3675 -2471 2217 85 7 0 chr17 8945741 8946034 -76492446 - AluSg SINE Alu -15 295 1 873 182 55 12 chr17 8946040 8946205 -76492275 - FAM SINE Alu -3 172 1 283 295 74 68 chr17 8946205 8946259 -76492221 + L1 LINE L1 3679 3755 -2391 862 261 132 17 chr17 8946380 8946530 -76491950 + L1ME3A LINE L1 5777 5908 -262 2460 62 0 0 chr17 8946530 8946837 -76491643 + AluY SINE Alu 3 309 -2 862 261 132 17 chr17 8946837 8947035 -76491445 + L1ME3A LINE L1 5908 6165 -5 2289 109 0 0 chr17 8947051 8947363 -76491117 + AluSx SINE Alu 1 312 0 409 214 11 0 chr17 8947371 8947460 -76491020 + MIR SINE MIR 162 251 -11 300 282 100 18 chr17 8947622 8947732 -76490748 - MIR SINE MIR -133 129 11 2410 71 3 3 chr17 8947828 8948139 -76490341 - AluSp SINE Alu -2 311 1 770 185 0 7 chr17 8948149 8948284 -76490196 - FLAM_C SINE Alu -8 135 2 198 0 0 0 chr17 8948373 8948395 -76490085 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 2036 125 7 0 chr17 8948521 8948817 -76489663 + AluSx SINE Alu 1 298 -14 1863 122 15 61 chr17 8949785 8950112 -76488368 - AluSx SINE Alu 0 312 1 350 323 112 31 chr17 8950242 8950403 -76488077 + MER117 DNA MER1_type 1 174 -23 2271 89 13 0 chr17 8951006 8951310 -76487170 - AluSg SINE Alu -2 308 1 2024 106 10 0 chr17 8951766 8952058 -76486422 - AluSc SINE Alu -14 295 1 1212 112 28 6 chr17 8952059 8952238 -76486242 - MSTA LTR MaLR -229 199 17 1039 204 44 54 chr17 8952274 8952568 -76485912 + L1ME3A LINE L1 5827 6117 -53 1452 241 62 63 chr17 8952821 8953783 -76484697 + L1MD3 LINE L1 5338 6001 -1994 3195 181 67 44 chr17 8952894 8953096 -76485384 + L1MB8 LINE L1 5415 5611 -567 2114 114 7 0 chr17 8953096 8953394 -76485086 - AluSx SINE Alu -10 302 3 3195 181 67 44 chr17 8953394 8953938 -76484542 + L1MB8 LINE L1 5611 6178 0 1408 161 11 46 chr17 8954040 8954325 -76484155 + AluJo SINE Alu 33 307 -5 2808 240 77 38 chr17 8954341 8955616 -76482864 + L1ME1 LINE L1 3956 6161 -5 200 277 60 0 chr17 8955872 8955955 -76482525 + (TAAA)n Simple_repeat Simple_repeat 3 90 0 260 320 36 23 chr17 8956006 8956225 -76482255 + L1M4 LINE L1 4795 5016 -1130 516 265 28 22 chr17 8956227 8956408 -76482072 + L1MEd LINE L1 4 185 -5934 294 309 12 0 chr17 8956528 8956612 -76481868 + L1MEd LINE L1 244 328 -5791 203 191 24 0 chr17 8956612 8956654 -76481826 - L2 LINE L2 -5 3308 3266 292 88 35 0 chr17 8956856 8956913 -76481567 + GA-rich Low_complexity Low_complexity 1 59 0 665 277 145 21 chr17 8956916 8957347 -76481133 - L2 LINE L2 -214 3099 2610 744 315 56 45 chr17 8957358 8957872 -76480608 + L1MEd LINE L1 331 850 -5269 713 250 123 4 chr17 8957861 8958097 -76480383 + L1ME3 LINE L1 5859 6122 -40 * 353 154 46 0 chr17 8958434 8958499 -76479981 - MIR SINE MIR -55 153 86 972 150 6 6 chr17 8958570 8958737 -76479743 + FRAM SINE Alu 10 176 0 874 168 0 7 chr17 8958888 8959043 -76479437 + FRAM SINE Alu 1 151 -25 360 57 0 0 chr17 8959050 8959103 -76479377 + L1MB3 LINE L1 6127 6179 -4 2359 94 0 0 chr17 8959835 8960142 -76478338 + AluSc SINE Alu 1 307 -2 2229 84 0 7 chr17 8960878 8961177 -76477303 - AluSx SINE Alu -15 297 1 239 258 0 32 chr17 8961611 8961673 -76476807 + MIR SINE MIR 182 241 -21 1419 110 10 5 chr17 8962749 8962958 -76475522 - AluSg/x SINE Alu -18 292 83 183 42 0 0 chr17 8963202 8963226 -76475254 + (TATAA)n Simple_repeat Simple_repeat 4 27 0 246 156 0 0 chr17 8963333 8963378 -76475102 + (TTCA)n Simple_repeat Simple_repeat 2 46 0 525 309 49 10 chr17 8963389 8963593 -76474887 + MIR SINE MIR 8 219 -43 197 244 0 0 chr17 8963656 8963701 -76474779 - L2 LINE L2 -15 3257 3213 219 229 0 21 chr17 8965892 8965940 -76472540 + GA-rich Low_complexity Low_complexity 4 50 0 21 36 0 0 chr17 8967439 8967467 -76471013 + GC_rich Low_complexity Low_complexity 1 28 0 3212 124 15 35 chr17 8969460 8969729 -76468751 - L1MB3 LINE L1 -8 6175 5902 2065 117 0 10 chr17 8969729 8970037 -76468443 - AluSx SINE Alu -7 305 1 3212 124 15 35 chr17 8970037 8970160 -76468320 - L1MB3 LINE L1 -281 5902 5778 2674 82 36 6 chr17 8970160 8970524 -76467956 - THE1C LTR MaLR 0 375 1 3212 124 15 35 chr17 8970524 8970677 -76467803 - L1MB3 LINE L1 -405 5778 5640 2464 221 90 37 chr17 8970687 8971277 -76467203 - L1ME3A LINE L1 0 6170 5530 2585 92 19 29 chr17 8971277 8971656 -76466824 + THE1C LTR MaLR 1 375 0 2464 221 90 37 chr17 8971656 8971822 -76466658 - L1ME3A LINE L1 -640 5530 5374 1501 140 49 18 chr17 8971835 8972120 -76466360 - AluJo SINE Alu -18 294 1 206 355 57 87 chr17 8972580 8972946 -76465534 - L2 LINE L2 -1 3271 2917 2005 109 0 20 chr17 8973239 8973543 -76464937 + AluSc SINE Alu 1 298 -11 314 193 28 92 chr17 8973613 8973722 -76464758 - L1MCa LINE L1 -4361 2065 1964 823 146 0 29 chr17 8973726 8973863 -76464617 + FLAM_C SINE Alu 1 133 0 310 245 128 20 chr17 8973879 8973981 -76464499 + HAL1b LINE L1 1232 1344 -4 238 227 91 18 chr17 8974159 8974269 -76464211 + L1ME4a LINE L1 5599 5716 -405 242 154 0 15 chr17 8974272 8974337 -76464143 + GA-rich Low_complexity Low_complexity 4 67 0 430 291 67 32 chr17 8974337 8974421 -76464059 + L1ME4a LINE L1 5724 5804 -317 2044 91 10 14 chr17 8974421 8974718 -76463762 - AluSq SINE Alu -17 296 1 430 291 67 32 chr17 8974718 8974977 -76463503 + L1ME4a LINE L1 5804 6079 -42 2087 121 7 7 chr17 8976188 8976494 -76461986 - AluSg SINE Alu -2 308 3 255 312 64 29 chr17 8976994 8977167 -76461313 + L1 LINE L1 4045 4223 -1923 2439 68 0 3 chr17 8977168 8977478 -76461002 + AluY SINE Alu 1 309 -2 1595 117 73 4 chr17 8978329 8978576 -76459904 - AluSx SINE Alu -15 297 34 2117 104 7 3 chr17 8978596 8978894 -76459586 - AluSx SINE Alu -13 299 1 2216 92 0 3 chr17 8978971 8979265 -76459215 - AluSg SINE Alu -17 293 1 839 182 0 0 chr17 8979338 8979470 -76459010 - FLAM_A SINE Alu 0 133 2 21 0 0 0 chr17 8979753 8979774 -76458706 + AT_rich Low_complexity Low_complexity 1 21 0 400 315 122 20 chr17 8979909 8980204 -76458276 - L2 LINE L2 -1 3312 2988 2068 120 0 0 chr17 8980375 8980667 -76457813 + AluSx SINE Alu 1 292 -20 900 161 62 0 chr17 8980676 8980837 -76457643 + AluJb SINE Alu 121 291 -21 239 336 182 21 chr17 8980839 8981372 -76457108 - L2 LINE L2 -618 2696 2078 200 170 19 0 chr17 8981372 8981425 -76457055 + (TGGA)n Simple_repeat Simple_repeat 1 54 0 2164 53 11 7 chr17 8981773 8982056 -76456424 + AluY SINE Alu 12 295 -16 2192 88 7 3 chr17 8982212 8982507 -76455973 + AluSq SINE Alu 1 296 -17 21 0 0 0 chr17 8982711 8982732 -76455748 + AT_rich Low_complexity Low_complexity 1 21 0 2042 118 0 3 chr17 8983607 8983941 -76454539 + AluSg SINE Alu 1 310 0 610 192 245 0 chr17 8983966 8984117 -76454363 + MER5A DNA MER1_type 1 188 -1 2469 82 0 0 chr17 8984618 8984912 -76453568 - AluSc SINE Alu -13 296 3 2737 154 2 7 chr17 8985084 8985520 -76452960 - Tigger2a DNA MER2_type 0 434 1 3093 161 31 27 chr17 8985776 8986361 -76452119 - L1MB5 LINE L1 0 6174 5588 1034 242 8 4 chr17 8986506 8986746 -76451734 - MIR SINE MIR -16 246 6 306 73 0 0 chr17 8986925 8986966 -76451514 + (T)n Simple_repeat Simple_repeat 1 41 0 270 205 156 74 chr17 8986966 8987088 -76451392 - MIR SINE MIR -14 248 117 585 103 41 0 chr17 8987313 8987410 -76451070 + L1PB3 LINE L1 6053 6153 -1 2025 136 0 7 chr17 8987420 8987722 -76450758 + AluSx SINE Alu 1 300 -12 2204 101 10 0 chr17 8989253 8989541 -76448939 + AluSq SINE Alu 4 294 -19 1395 163 6 131 chr17 8989544 8989888 -76448592 + AluJb SINE Alu 2 302 0 523 289 41 5 chr17 8989929 8990147 -76448333 + L2 LINE L2 2843 3068 -245 322 165 12 12 chr17 8990346 8990431 -76448049 + (TGAA)n Simple_repeat Simple_repeat 1 85 0 258 339 59 0 chr17 8991923 8992041 -76446439 - L2 LINE L2 -4 3268 3144 1388 159 14 0 chr17 8992334 8992548 -76445932 - MER58A DNA MER1_type -1 223 7 3044 223 26 41 chr17 8992676 8992811 -76445669 - MSTD-int LTR MaLR -1013 722 586 743 126 0 0 chr17 8992811 8992914 -76445566 - U6 snRNA snRNA -2 105 3 3044 223 26 41 chr17 8992914 8993510 -76444970 - MSTD-int LTR MaLR -1149 586 2 739 179 30 65 chr17 8993513 8993681 -76444799 - MSTD LTR MaLR -1 395 234 401 227 21 0 chr17 8994912 8995009 -76443471 - AluSg SINE Alu -210 100 2 1758 153 0 53 chr17 8995070 8995390 -76443090 - AluSx SINE Alu -9 303 1 1485 176 66 4 chr17 8995542 8995815 -76442665 - Tigger3(Golem) DNA MER2_type -11 3018 2729 2110 121 0 0 chr17 8995815 8996095 -76442385 + AluSg SINE Alu 1 280 -30 225 287 46 0 chr17 8996325 8996412 -76442068 - Tigger5 DNA MER2_type -5 2318 2228 1714 155 76 10 chr17 8996512 8996815 -76441665 + MER31A LTR ERV1 158 480 -5 2307 112 0 0 chr17 8997884 8998187 -76440293 + AluSx SINE Alu 1 303 -9 479 241 102 89 chr17 8999008 8999402 -76439078 - HAL1 LINE L1 -740 1767 1369 445 262 22 142 chr17 8999391 8999568 -76438912 - HAL1 LINE L1 -1431 1076 964 * 1430 74 5 0 chr17 8999568 8999757 -76438723 + L1PA6 LINE L1 5960 6149 -5 445 262 22 142 chr17 8999757 8999946 -76438534 - HAL1 LINE L1 -1543 964 754 186 43 0 0 chr17 9000097 9000120 -76438360 + (T)n Simple_repeat Simple_repeat 1 23 0 1785 148 50 7 chr17 9000403 9000680 -76437800 + AluJo SINE Alu 5 293 -19 2349 82 0 19 chr17 9000683 9000998 -76437482 + AluSg SINE Alu 1 309 -1 1267 120 0 11 chr17 9001469 9001652 -76436828 + AluSg/x SINE Alu 112 292 -18 455 295 76 9 chr17 9001672 9001896 -76436584 - MIR SINE MIR -1 261 23 23 0 0 0 chr17 9003252 9003275 -76435205 + AT_rich Low_complexity Low_complexity 1 23 0 1970 98 0 0 chr17 9003434 9003689 -76434791 + AluSc SINE Alu 41 295 -14 235 133 17 17 chr17 9003693 9003753 -76434727 + A-rich Low_complexity Low_complexity 1 60 0 1973 232 87 33 chr17 9003753 9004306 -76434174 + MER72 LTR ERV1 83 673 -49 2054 120 3 20 chr17 9004306 9004607 -76433873 + AluSx SINE Alu 5 300 -12 1973 232 87 33 chr17 9004607 9004660 -76433820 + MER72 LTR ERV1 673 722 0 665 236 28 0 chr17 9004780 9004924 -76433556 + MER21B LTR ERV1 5 152 -711 1023 108 0 0 chr17 9005033 9005163 -76433317 - AluSg SINE Alu -179 131 2 234 0 0 0 chr17 9006161 9006187 -76432293 + (A)n Simple_repeat Simple_repeat 1 26 0 2911 213 83 8 chr17 9007467 9008102 -76430378 + MER21B LTR ERV1 121 803 -60 2137 104 37 0 chr17 9008631 9008928 -76429552 + AluY SINE Alu 1 308 -3 953 155 19 25 chr17 9009331 9009492 -76428988 - FRAM SINE Alu -5 161 2 1369 196 29 29 chr17 9010018 9010329 -76428151 + AluJb SINE Alu 1 311 -1 307 235 61 10 chr17 9010346 9010444 -76428036 + AluSp SINE Alu 3 105 -198 244 53 0 0 chr17 9010544 9010582 -76427898 + Alu SINE Alu 265 302 0 2440 81 16 0 chr17 9010929 9011237 -76427243 + AluSq SINE Alu 1 313 0 2341 167 16 11 chr17 9011354 9011731 -76426749 + MER44D DNA MER2_type 1 379 -326 1136 153 0 26 chr17 9011740 9011930 -76426550 + AluJo SINE Alu 17 201 -111 1022 118 53 21 chr17 9011932 9012010 -76426470 + Tigger7 DNA MER2_type 2178 2252 -235 198 0 0 0 chr17 9012010 9012032 -76426448 + (GA)n Simple_repeat Simple_repeat 1 22 0 1022 118 53 21 chr17 9012032 9012140 -76426340 + Tigger7 DNA MER2_type 2252 2370 -117 2316 97 0 7 chr17 9012140 9012448 -76426032 + AluSq SINE Alu 1 306 -7 1571 138 12 0 chr17 9012623 9012870 -76425610 + LTR48B LTR ERV1 7 256 -388 2477 73 0 3 chr17 9012871 9013173 -76425307 + AluY SINE Alu 3 303 -8 1993 82 0 0 chr17 9013395 9013639 -76424841 + AluSq SINE Alu 62 305 -8 1168 184 58 51 chr17 9014304 9014598 -76423882 - AluJo SINE Alu -11 301 6 228 133 0 0 chr17 9014944 9015009 -76423471 - Alu SINE Alu 0 318 254 681 199 164 59 chr17 9015172 9015428 -76423052 - MER102a DNA MER1_type -14 316 34 230 217 43 0 chr17 9015507 9015576 -76422904 + CT-rich Low_complexity Low_complexity 3 74 0 2294 84 0 14 chr17 9015733 9016029 -76422451 + AluSq SINE Alu 1 292 -21 191 225 0 0 chr17 9017402 9017442 -76421038 + MIR3 SINE MIR 154 193 -15 2112 82 0 38 chr17 9017701 9018031 -76420449 - AluY SINE Alu 0 319 1 2014 128 21 0 chr17 9018229 9018519 -76419961 - AluSx SINE Alu -16 296 1 23 33 0 0 chr17 9018935 9018965 -76419515 + AT_rich Low_complexity Low_complexity 1 30 0 28 48 0 0 chr17 9019887 9019929 -76418551 + AT_rich Low_complexity Low_complexity 1 42 0 2230 84 0 7 chr17 9020042 9020340 -76418140 + AluSx SINE Alu 11 306 -6 1509 121 117 16 chr17 9020603 9020882 -76417598 + AluSx SINE Alu 1 305 0 3029 179 10 62 chr17 9021509 9021685 -76416795 + L1MC3 LINE L1 5892 6076 -1709 2172 61 6 98 chr17 9021685 9022012 -76416468 + AluSq SINE Alu 1 297 -16 3029 179 10 62 chr17 9022012 9022399 -76416081 + L1MC3 LINE L1 6076 6417 -1368 2357 86 0 3 chr17 9022399 9022703 -76415777 + AluSg SINE Alu 1 303 -7 3029 179 10 62 chr17 9022703 9022818 -76415662 + L1MC3 LINE L1 6417 6536 -1249 907 144 77 62 chr17 9022818 9022977 -76415503 + L1MC3 LINE L1 6857 7021 -764 1988 124 12 50 chr17 9022977 9023299 -76415181 + AluSx SINE Alu 1 310 -2 907 144 77 62 chr17 9023299 9023347 -76415133 + L1MC3 LINE L1 7021 7067 -718 230 301 24 24 chr17 9023362 9023445 -76415035 + MLT1F1 LTR MaLR 36 118 -449 2732 184 59 9 chr17 9023445 9024006 -76414474 + L1MC3 LINE L1 7184 7772 -13 461 216 26 92 chr17 9024005 9024050 -76414430 + L1M4 LINE L1 4718 4764 -1382 * 1913 154 3 3 chr17 9024050 9024349 -76414131 + AluSx SINE Alu 1 299 -13 461 216 26 92 chr17 9024349 9024456 -76414024 + L1M4 LINE L1 4764 4860 -1286 229 306 0 0 chr17 9024656 9024746 -76413734 - MIR SINE MIR -85 123 33 2481 97 0 0 chr17 9024867 9025177 -76413303 + AluSx SINE Alu 1 310 -2 813 210 0 3 chr17 9025389 9025704 -76412776 + (TGGA)n Simple_repeat Simple_repeat 1 313 0 210 147 0 0 chr17 9025719 9025753 -76412727 + (CATA)n Simple_repeat Simple_repeat 2 35 0 217 353 0 47 chr17 9026503 9026588 -76411892 + L2 LINE L2 3157 3237 -35 2447 81 3 0 chr17 9027018 9027315 -76411165 + AluSp SINE Alu 1 298 -15 537 198 0 0 chr17 9027350 9027451 -76411029 - L1MD3 LINE L1 -15 7980 7880 247 183 76 53 chr17 9027640 9027771 -76410709 - Charlie7 DNA MER1_type 0 2612 2479 282 254 0 0 chr17 9027800 9027859 -76410621 - Charlie7 DNA MER1_type -2518 94 36 216 365 0 0 chr17 9028618 9028681 -76409799 + L2 LINE L2 3210 3272 0 794 221 113 63 chr17 9029207 9029222 -76409258 + HAL1 LINE L1 1121 1134 -1373 1825 150 6 42 chr17 9029222 9029366 -76409114 + AluJo SINE Alu 1 149 -163 2567 52 0 23 chr17 9029366 9029673 -76408807 + AluSg SINE Alu 1 300 -10 1825 150 6 42 chr17 9029673 9029841 -76408639 + AluJo SINE Alu 149 302 -10 794 221 113 63 chr17 9029841 9030205 -76408275 + HAL1 LINE L1 1134 1519 -988 829 247 116 86 chr17 9030241 9030554 -76407926 + HAL1 LINE L1 1728 2030 -477 2355 100 0 0 chr17 9030554 9030855 -76407625 + AluSg SINE Alu 1 301 -9 829 247 116 86 chr17 9030855 9031293 -76407187 + HAL1 LINE L1 2030 2501 -6 2500 247 87 61 chr17 9031474 9031991 -76406489 + L1MC4 LINE L1 6349 6851 -957 1692 137 14 41 chr17 9031991 9032283 -76406197 + AluJo SINE Alu 17 300 -12 2500 247 87 61 chr17 9032283 9032412 -76406068 + L1MC4 LINE L1 6851 6975 -833 1899 34 24 119 chr17 9032412 9032707 -76405773 + AluYb8 SINE Alu 41 307 -11 2500 247 87 61 chr17 9032707 9032992 -76405488 + L1MC4 LINE L1 6975 7251 -557 1818 154 3 10 chr17 9032992 9033285 -76405195 - AluJb SINE Alu 0 312 22 2500 247 87 61 chr17 9033285 9033706 -76404774 + L1MC4 LINE L1 7251 7675 -133 2032 117 10 7 chr17 9033716 9034014 -76404466 + AluSx SINE Alu 1 299 -13 198 0 0 0 chr17 9034350 9034372 -76404108 + (TTTTTG)n Simple_repeat Simple_repeat 1 22 0 571 285 44 33 chr17 9034484 9034754 -76403726 - L1ME1 LINE L1 -18 6148 5876 * 3450 209 119 36 chr17 9034730 9035834 -76402646 - L1MDb LINE L1 -4110 2296 1072 1614 192 4 0 chr17 9035834 9036110 -76402370 - AluJo SINE Alu -2 310 34 3450 209 119 36 chr17 9036110 9036436 -76402044 - L1MDb LINE L1 -5334 1072 775 298 225 51 87 chr17 9036805 9036943 -76401537 - L1MC4 LINE L1 0 8042 7910 26 0 0 0 chr17 9036984 9037010 -76401470 + AT_rich Low_complexity Low_complexity 1 26 0 2020 135 7 3 chr17 9037010 9037298 -76401182 - AluSx SINE Alu -23 289 1 378 288 66 47 chr17 9037397 9037609 -76400871 - L1MC4 LINE L1 -232 7810 7595 2437 65 0 36 chr17 9037610 9037918 -76400562 - AluSg SINE Alu -8 302 6 2275 109 0 0 chr17 9037933 9038227 -76400253 - AluSq SINE Alu -17 296 3 2358 101 0 0 chr17 9039639 9039945 -76398535 - AluSp SINE Alu -4 309 4 1567 174 6 59 chr17 9041326 9041419 -76397061 + AluJo SINE Alu 1 97 -215 2256 123 3 0 chr17 9041419 9041729 -76396751 + AluSq SINE Alu 1 311 -2 1567 174 6 59 chr17 9041729 9041957 -76396523 + AluJo SINE Alu 97 305 -7 2344 58 4 0 chr17 9043410 9043713 -76394767 - AluY SINE Alu 0 305 2 1134 182 81 8 chr17 9043826 9044062 -76394418 - MER33 DNA MER1_type -69 255 3 373 174 12 23 chr17 9044294 9044380 -76394100 - L1MB8 LINE L1 -1 6177 6093 432 117 62 0 chr17 9044449 9044594 -76393886 + (TA)n Simple_repeat Simple_repeat 1 154 0 2124 125 3 7 chr17 9044594 9044898 -76393582 + AluSq SINE Alu 1 303 -10 255 286 47 22 chr17 9044966 9045151 -76393329 - Charlie8 DNA MER1_type -2204 213 5 2302 99 0 0 chr17 9045495 9045787 -76392693 + AluSx SINE Alu 11 302 -10 2352 89 10 3 chr17 9047002 9047305 -76391175 - AluSg SINE Alu -5 305 1 2364 107 15 12 chr17 9047722 9048060 -76390420 + MER1B DNA MER1_type 1 339 0 2448 80 3 0 chr17 9048309 9048611 -76389869 + AluSx SINE Alu 1 303 -9 515 234 124 0 chr17 9048790 9048927 -76389553 - Charlie8 DNA MER1_type -2167 250 97 44 40 0 13 chr17 9048979 9049016 -76389464 + AT_rich Low_complexity Low_complexity 1 37 -38 188 35 35 0 chr17 9049016 9049045 -76389435 + (TA)n Simple_repeat Simple_repeat 1 30 0 44 40 0 13 chr17 9049045 9049083 -76389397 + AT_rich Low_complexity Low_complexity 37 75 0 2455 81 3 0 chr17 9049089 9049396 -76389084 + AluSp SINE Alu 1 308 -5 2204 91 0 27 chr17 9050375 9050673 -76387807 - AluY SINE Alu -21 290 1 349 279 48 30 chr17 9050941 9050954 -76387526 - MER5A DNA MER1_type -18 160 149 2460 72 0 0 chr17 9050954 9051245 -76387235 - AluY SINE Alu -9 302 12 349 279 48 30 chr17 9051245 9051398 -76387082 - MER5A DNA MER1_type -29 149 7 220 262 0 127 chr17 9051652 9051694 -76386786 + L2 LINE L2 2712 2758 -556 2428 92 0 0 chr17 9051694 9051997 -76386483 + AluSq SINE Alu 3 305 -8 220 262 0 127 chr17 9051997 9052080 -76386400 + L2 LINE L2 2758 2821 -493 2132 108 42 0 chr17 9052379 9052665 -76385815 + AluSx SINE Alu 1 298 -14 1743 157 3 7 chr17 9053312 9053606 -76384874 + AluSg SINE Alu 1 293 -17 228 151 14 55 chr17 9053618 9053691 -76384789 + GA-rich Low_complexity Low_complexity 3 72 0 264 111 0 0 chr17 9054188 9054233 -76384247 + (TG)n Simple_repeat Simple_repeat 1 45 0 301 216 169 14 chr17 9054355 9054503 -76383977 - L1ME4a LINE L1 -2 6119 5949 668 220 32 0 chr17 9054516 9054670 -76383810 + MSTD LTR MaLR 1 159 -237 3178 126 71 15 chr17 9054683 9055201 -76383279 - LTR10A LTR ERV1 -62 547 1 686 176 124 36 chr17 9055202 9055395 -76383085 + MSTD LTR MaLR 176 385 -11 4090 139 21 44 chr17 9055488 9056194 -76382286 + LTR8 LTR ERV1 2 691 0 2465 61 0 7 chr17 9056358 9056654 -76381826 + AluY SINE Alu 1 294 -17 1793 140 13 2 chr17 9056658 9056935 -76381545 + L1PA16 LINE L1 5867 6145 -21 251 177 190 25 chr17 9057181 9057260 -76381220 - L2 LINE L2 -39 3233 3142 21 0 0 0 chr17 9058771 9058792 -76379688 + AT_rich Low_complexity Low_complexity 1 21 0 1900 100 0 16 chr17 9060351 9060601 -76377879 + AluSc SINE Alu 1 246 -63 21 0 0 0 chr17 9060601 9060622 -76377858 + AT_rich Low_complexity Low_complexity 1 21 0 213 355 97 27 chr17 9060789 9060975 -76377505 + L3 LINE CR1 984 1182 -395 1334 164 35 87 chr17 9061015 9061191 -76377289 + MER58B DNA MER1_type 46 201 -2219 2278 70 3 67 chr17 9061191 9061522 -76376958 - AluY SINE Alu -1 310 1 1334 164 35 87 chr17 9061522 9061657 -76376823 + MER58B DNA MER1_type 201 341 0 478 237 164 13 chr17 9061667 9061819 -76376661 - MER5A DNA MER1_type -2 187 13 2260 88 17 7 chr17 9061909 9062204 -76376276 - AluSg SINE Alu -11 299 2 1818 80 0 36 chr17 9063807 9064057 -76374423 - AluY SINE Alu -15 296 56 373 196 107 0 chr17 9064271 9064383 -76374097 - L1MA8 LINE L1 -3 6288 6165 283 348 63 6 chr17 9064878 9065036 -76373444 + L2 LINE L2 2261 2427 -887 1243 213 115 37 chr17 9065126 9065539 -76372941 + MER66A LTR ERV1 100 448 -30 279 375 46 32 chr17 9065560 9065840 -76372640 + L2 LINE L2 2491 2774 -540 2272 86 0 7 chr17 9065866 9066157 -76372323 + AluSc SINE Alu 1 289 -20 226 313 12 12 chr17 9066327 9066410 -76372070 + L2 LINE L2 3017 3099 -173 454 179 12 0 chr17 9066546 9066630 -76371850 - L1MA10 LINE L1 -32 6302 6218 268 290 110 21 chr17 9066812 9066957 -76371523 - MIR SINE MIR -81 181 24 1068 62 8 0 chr17 9068574 9068704 -76369776 + AluSc SINE Alu 1 131 -178 230 73 24 0 chr17 9068704 9068745 -76369735 + (CAA)n Simple_repeat Simple_repeat 2 43 0 1052 65 0 0 chr17 9068800 9068923 -76369557 + AluSc SINE Alu 1 123 -186 1010 89 0 0 chr17 9069013 9069136 -76369344 + AluSc SINE Alu 1 123 -186 2474 77 0 0 chr17 9069220 9069519 -76368961 + AluY SINE Alu 1 299 -12 1687 182 26 6 chr17 9069532 9069873 -76368607 + L1MB4 LINE L1 5738 6085 -95 1082 269 4 4 chr17 9070018 9070263 -76368217 - AluSq SINE Alu -68 245 1 2331 82 7 0 chr17 9070665 9070958 -76367522 + AluY SINE Alu 4 298 -13 254 275 38 69 chr17 9071299 9071400 -76367080 + MER5B DNA MER1_type 4 102 -76 2247 182 72 115 chr17 9071400 9071547 -76366933 + LTR8A LTR ERV1 1 153 -574 2381 92 0 0 chr17 9071547 9071839 -76366641 - AluSg1 SINE Alu -17 292 1 2247 182 72 115 chr17 9071839 9072450 -76366030 + LTR8A LTR ERV1 153 727 0 254 275 38 69 chr17 9072450 9072479 -76366001 + MER5B DNA MER1_type 102 130 -48 436 183 11 11 chr17 9072525 9072618 -76365862 - MER5B DNA MER1_type -6 172 80 479 221 11 0 chr17 9072618 9072713 -76365767 + MER21B LTR ERV1 1 96 -767 1922 259 77 37 chr17 9072766 9073438 -76365042 + MER21B LTR ERV1 98 796 -67 339 220 22 77 chr17 9073451 9073542 -76364938 - MER5B DNA MER1_type -89 89 4 210 37 0 0 chr17 9073687 9073714 -76364766 + (A)n Simple_repeat Simple_repeat 1 27 0 2405 65 10 0 chr17 9073717 9074008 -76364472 + AluY SINE Alu 1 294 -17 1639 170 13 32 chr17 9074081 9074393 -76364087 - AluJb SINE Alu -4 308 3 651 137 0 73 chr17 9074414 9074538 -76363942 - FLAM_A SINE Alu -18 124 10 251 335 49 27 chr17 9075782 9075967 -76362513 + L2 LINE L2 1755 1943 -1371 182 200 0 0 chr17 9076171 9076206 -76362274 + L2 LINE L2 2607 2641 -673 195 39 0 0 chr17 9076271 9076279 -76362201 + (T)n Simple_repeat Simple_repeat 1 8 -18 2433 76 3 0 chr17 9076279 9076581 -76361899 + AluSp SINE Alu 1 303 -10 195 39 0 0 chr17 9076581 9076598 -76361882 + (T)n Simple_repeat Simple_repeat 7 26 0 264 252 0 107 chr17 9076610 9076713 -76361767 + MER58A DNA MER1_type 27 118 0 2269 157 8 17 chr17 9076754 9076927 -76361553 - L1MB5 LINE L1 -8 6166 5993 1860 131 138 60 chr17 9076927 9077274 -76361206 + MSTA LTR MaLR 1 384 -44 2386 93 0 7 chr17 9077274 9077575 -76360905 - AluSq SINE Alu -14 299 1 1860 131 138 60 chr17 9077575 9077624 -76360856 + MSTA LTR MaLR 384 428 0 2269 157 8 17 chr17 9077624 9077852 -76360628 - L1MB5 LINE L1 -181 5993 5769 467 259 36 0 chr17 9077860 9077972 -76360508 + MER58A DNA MER1_type 108 223 -1 488 306 55 12 chr17 9078029 9078284 -76360196 + L1MC4a LINE L1 5697 5962 -1846 2216 112 0 7 chr17 9078488 9078792 -76359688 - AluSg SINE Alu -8 302 1 2227 116 7 0 chr17 9081168 9081461 -76357019 + AluSg SINE Alu 1 295 -15 2898 211 51 27 chr17 9081466 9082097 -76356383 - MER82 DNA MER2_type -6 647 2 22 0 0 0 chr17 9082192 9082214 -76356266 + AT_rich Low_complexity Low_complexity 1 22 0 2453 236 51 36 chr17 9082248 9082551 -76355929 + L1ME1 LINE L1 5467 5764 -402 2368 75 0 3 chr17 9082551 9082857 -76355623 + AluY SINE Alu 2 306 -5 2453 236 51 36 chr17 9082857 9083108 -76355372 + L1ME1 LINE L1 5764 6035 -131 766 139 0 36 chr17 9083108 9083245 -76355235 + FLAM_A SINE Alu 1 132 -1 2453 236 51 36 chr17 9083245 9083358 -76355122 + L1ME1 LINE L1 6035 6145 -21 2297 94 10 0 chr17 9083359 9083647 -76354833 - AluSx SINE Alu -21 291 1 347 187 135 54 chr17 9083766 9083877 -76354603 - FLAM_A SINE Alu -15 118 1 21 82 0 0 chr17 9083908 9083957 -76354523 + AT_rich Low_complexity Low_complexity 1 49 0 213 377 0 0 chr17 9084211 9084288 -76354192 - L2 LINE L2 -11 3261 3185 21 36 0 0 chr17 9084872 9084900 -76353580 + AT_rich Low_complexity Low_complexity 1 28 0 189 0 0 0 chr17 9085062 9085083 -76353397 + (GA)n Simple_repeat Simple_repeat 2 22 0 2290 76 3 23 chr17 9086075 9086377 -76352103 - AluSx SINE Alu -16 296 1 2539 82 0 0 chr17 9086759 9087064 -76351416 - AluSx SINE Alu 0 312 1 517 139 13 0 chr17 9087414 9087493 -76350987 - Tigger7 DNA MER2_type 0 2487 2408 1442 181 3 60 chr17 9087496 9087668 -76350812 - Tigger7 DNA MER2_type -284 266 115 2562 40 7 7 chr17 9087668 9087970 -76350510 + AluY SINE Alu 1 302 -9 1442 181 3 60 chr17 9087970 9088079 -76350401 - Tigger7 DNA MER2_type -435 115 1 1785 148 50 7 chr17 9088209 9088486 -76349994 + AluJo SINE Alu 5 293 -19 2349 82 0 19 chr17 9088489 9088804 -76349676 + AluSg SINE Alu 1 309 -1 955 278 65 45 chr17 9090251 9090412 -76348068 - MLT1L LTR MaLR -8 607 451 2144 187 49 28 chr17 9090412 9090905 -76347575 - MLT1D LTR MaLR -2 503 1 955 278 65 45 chr17 9090905 9091192 -76347288 - MLT1L LTR MaLR -164 451 150 2409 75 0 0 chr17 9091425 9091718 -76346762 - AluY SINE Alu -18 293 1 468 232 118 63 chr17 9092049 9092098 -76346382 - LTR50 LTR ERVL -1 794 749 2562 53 0 10 chr17 9092098 9092401 -76346079 - AluY SINE Alu -11 300 1 468 232 118 63 chr17 9092401 9092790 -76345690 - LTR50 LTR ERVL -46 749 213 2118 115 0 0 chr17 9092806 9093084 -76345396 - AluY SINE Alu -33 278 1 684 199 70 0 chr17 9093195 9093351 -76345129 - LTR50 LTR ERVL -628 167 1 2345 107 0 0 chr17 9093660 9093968 -76344512 + AluSq SINE Alu 1 308 -5 797 253 5 5 chr17 9094026 9094224 -76344256 + MIR SINE MIR 11 208 -54 3788 112 6 6 chr17 9094887 9095414 -76343066 - MER1A DNA MER1_type 0 527 1 2143 112 0 3 chr17 9095709 9095994 -76342486 + AluSx SINE Alu 1 284 -28 444 256 52 47 chr17 9096436 9096608 -76341872 + MIR SINE MIR 74 246 -16 1948 105 36 39 chr17 9096761 9096895 -76341585 + AluSx SINE Alu 1 134 -178 2442 77 3 3 chr17 9096895 9097194 -76341286 + AluSp SINE Alu 1 299 -14 1948 105 36 39 chr17 9097194 9097364 -76341116 + AluSx SINE Alu 134 304 -8 2329 101 0 0 chr17 9097992 9098290 -76340190 - AluSg SINE Alu -12 298 1 387 319 103 25 chr17 9099032 9099236 -76339244 - MIR SINE MIR -37 225 6 2279 84 0 10 chr17 9099243 9099540 -76338940 - AluSg SINE Alu -16 294 1 228 296 38 32 chr17 9099958 9100144 -76338336 + L2 LINE L2 2493 2679 -635 2005 132 0 33 chr17 9100161 9100465 -76338015 - AluSx SINE Alu -18 294 1 718 144 8 8 chr17 9101924 9102042 -76336438 - FLAM_C SINE Alu -11 122 5 203 263 28 117 chr17 9102179 9102358 -76336122 - L3 LINE CR1 -514 1063 901 2303 80 6 13 chr17 9103584 9103897 -76334583 - AluY SINE Alu 0 311 1 419 224 84 9 chr17 9103941 9104048 -76334432 + L2 LINE L2 3193 3307 -6 2516 74 0 0 chr17 9105425 9105724 -76332756 - AluSx SINE Alu -13 299 1 2368 97 0 0 chr17 9106109 9106407 -76332073 + AluSc SINE Alu 1 298 -11 234 0 0 0 chr17 9106569 9106595 -76331885 + (A)n Simple_repeat Simple_repeat 1 26 0 333 130 13 117 chr17 9107833 9107910 -76330570 + AluY SINE Alu 119 187 -114 3999 173 44 33 chr17 9108011 9108416 -76330064 - L1P LINE L1 -924 5222 4823 2116 119 13 7 chr17 9108416 9108718 -76329762 - AluSx SINE Alu -8 304 1 3999 173 44 33 chr17 9108718 9108821 -76329659 - L1P LINE L1 -1323 4823 4723 2182 128 0 0 chr17 9108821 9109126 -76329354 - AluSx SINE Alu -7 305 1 3999 173 44 33 chr17 9109126 9109525 -76328955 - L1P LINE L1 -1423 4723 4304 671 227 8 105 chr17 9110014 9110261 -76328219 - L2 LINE L2 -5 3308 3086 1739 152 3 44 chr17 9110279 9110575 -76327905 + AluJb SINE Alu 1 284 -28 228 167 71 0 chr17 9110719 9110761 -76327719 + MER5A DNA MER1_type 143 187 -2 369 58 0 0 chr17 9110857 9110909 -76327571 + (GA)n Simple_repeat Simple_repeat 1 52 0 2382 88 0 13 chr17 9111456 9111763 -76326717 - AluSx SINE Alu -9 303 1 232 314 107 25 chr17 9111877 9111998 -76326482 - MIR SINE MIR -78 184 54 1637 148 10 40 chr17 9112275 9112572 -76325908 - AluJo SINE Alu -8 304 17 389 295 74 0 chr17 9112751 9112900 -76325580 - L1ME LINE L1 -334 5787 5628 2170 114 0 0 chr17 9113682 9113962 -76324518 - AluSq SINE Alu -33 280 1 1950 182 88 29 chr17 9114140 9114617 -76323863 + MLT1D LTR MaLR 1 505 0 1295 188 62 90 chr17 9114687 9115220 -76323260 + L1MC5 LINE L1 7408 7925 -36 2201 132 0 7 chr17 9115694 9116004 -76322476 + AluSx SINE Alu 3 310 -2 2258 108 0 0 chr17 9116502 9116789 -76321691 - AluSg SINE Alu -23 287 1 287 244 24 0 chr17 9116828 9116910 -76321570 - MIR SINE MIR -149 113 30 2438 25 0 11 chr17 9117841 9118120 -76320360 + AluY SINE Alu 28 303 -8 1630 157 36 11 chr17 9118409 9118689 -76319791 - AluJo SINE Alu -15 297 11 334 288 86 22 chr17 9118929 9119068 -76319412 + MIR SINE MIR 7 154 -108 296 209 122 43 chr17 9119166 9119281 -76319199 + MIR SINE MIR 89 212 -50 2154 130 0 0 chr17 9119684 9119976 -76318504 - AluSq SINE Alu -21 292 1 1204 83 0 0 chr17 9120165 9120321 -76318159 - AluY SINE Alu 0 311 156 2352 84 0 7 chr17 9120531 9120827 -76317653 - AluSg SINE Alu -16 294 1 236 290 93 19 chr17 9121277 9121384 -76317096 + MIR3 SINE MIR 68 182 -26 335 270 225 19 chr17 9122095 9122362 -76316118 - L1MC4a LINE L1 -1963 5845 5524 2259 122 0 0 chr17 9122364 9122675 -76315805 + AluSx SINE Alu 1 311 -1 1787 156 29 13 chr17 9122682 9122989 -76315491 + AluSx SINE Alu 1 312 0 1443 167 15 0 chr17 9123194 9123457 -76315023 - AluSx SINE Alu -45 267 1 27 73 0 0 chr17 9123580 9123635 -76314845 + AT_rich Low_complexity Low_complexity 1 55 0 1157 196 9 9 chr17 9123662 9123881 -76314599 - MER20 DNA MER1_type 0 219 1 231 67 0 0 chr17 9124277 9124307 -76314173 + MADE1 DNA Mariner 1 30 -50 1215 167 35 129 chr17 9124623 9124941 -76313539 - AluJo SINE Alu -16 296 9 22 35 0 0 chr17 9124951 9124980 -76313500 + AT_rich Low_complexity Low_complexity 1 29 0 43942 31 22 1 chr17 9124988 9130875 -76307605 + L1HS LINE L1 1 6017 -138 372 43 0 0 chr17 9131012 9131058 -76307422 + (CA)n Simple_repeat Simple_repeat 1 46 0 657 200 86 38 chr17 9131788 9131998 -76306482 + L2 LINE L2 3008 3227 -86 298 300 110 21 chr17 9132171 9132362 -76306118 - MIR3 SINE MIR -50 212 8 851 165 0 0 chr17 9132386 9132519 -76305961 + FLAM_C SINE Alu 1 133 0 2496 66 0 7 chr17 9133301 9133606 -76304874 + AluSg SINE Alu 1 303 -7 375 328 71 75 chr17 9133940 9134851 -76303629 + L2 LINE L2 2304 3259 -13 221 387 20 20 chr17 9135868 9136072 -76302408 - L2 LINE L2 -624 2690 2487 207 69 0 0 chr17 9136293 9136322 -76302158 + (TCCA)n Simple_repeat Simple_repeat 3 31 0 308 240 125 10 chr17 9136330 9136434 -76302046 - L2 LINE L2 -23 3290 3175 1869 58 8 62 chr17 9137130 9137388 -76301092 + AluY SINE Alu 1 244 -67 27 0 0 0 chr17 9137504 9137531 -76300949 + AT_rich Low_complexity Low_complexity 1 27 0 229 248 0 62 chr17 9138323 9138436 -76300044 + L1ME3A LINE L1 4398 4503 -1643 681 215 0 8 chr17 9138437 9138567 -76299913 - MER44D DNA MER2_type -1 704 576 559 111 127 63 chr17 9138565 9138691 -76299789 - MER44D DNA MER2_type -197 412 9 * 2490 229 83 30 chr17 9138725 9139745 -76298735 + L1ME3A LINE L1 4512 5581 -583 252 139 0 0 chr17 9139786 9139822 -76298658 + L1ME3A LINE L1 5677 5712 -458 2388 66 0 13 chr17 9139822 9140125 -76298355 - AluY SINE Alu -12 299 1 915 185 6 0 chr17 9140136 9140298 -76298182 - FAM SINE Alu -4 45 1 1413 242 106 9 chr17 9140302 9140727 -76297753 + L1ME3A LINE L1 5696 6161 -9 314 322 8 8 chr17 9140739 9140857 -76297623 + (CATATA)n Simple_repeat Simple_repeat 6 123 0 234 0 0 0 chr17 9140876 9140902 -76297578 + (TC)n Simple_repeat Simple_repeat 2 27 0 250 298 0 12 chr17 9141191 9141275 -76297205 + T-rich Low_complexity Low_complexity 1 83 0 2106 74 7 44 chr17 9141542 9141839 -76296641 + AluSg SINE Alu 1 286 -24 811 301 93 23 chr17 9142008 9142479 -76296001 - L1MC4a LINE L1 -1868 5940 5437 1691 134 0 0 chr17 9142699 9142946 -76295534 - AluJo SINE Alu -23 289 43 2684 17 0 0 chr17 9142946 9143235 -76295245 - AluYb8 SINE Alu -12 306 18 2037 106 32 0 chr17 9143263 9143547 -76294933 - AluSq SINE Alu -7 306 14 314 303 121 0 chr17 9143852 9143951 -76294529 - MIR SINE MIR -68 140 30 2545 69 3 0 chr17 9144504 9144809 -76293671 + AluY SINE Alu 1 306 -5 207 225 169 14 chr17 9144936 9145007 -76293473 - MER5B DNA MER1_type 0 178 97 2097 136 0 3 chr17 9145040 9145335 -76293145 + AluSx SINE Alu 1 294 -18 243 79 0 0 chr17 9145354 9145392 -76293088 + (CAAAA)n Simple_repeat Simple_repeat 3 40 0 2076 188 17 8 chr17 9145549 9145911 -76292569 + MLT1A1 LTR MaLR 1 365 0 955 235 167 48 chr17 9146200 9146660 -76291820 + Tigger8 DNA MER2_type 2 516 -150 183 205 0 0 chr17 9146733 9146772 -76291708 + (TA)n Simple_repeat Simple_repeat 2 40 0 1965 143 30 33 chr17 9146772 9146820 -76291660 - L1MA5 LINE L1 -3 6297 6250 2361 91 0 0 chr17 9146820 9147118 -76291362 - AluY SINE Alu -13 298 1 1965 143 30 33 chr17 9147118 9147432 -76291048 - L1MA5 LINE L1 -50 6250 5936 1904 138 3 7 chr17 9147550 9147833 -76290647 - AluSx SINE Alu -30 282 1 205 308 0 31 chr17 9147928 9147993 -76290487 - L2 LINE L2 0 3313 3251 2348 75 0 7 chr17 9148154 9148449 -76290031 - AluSq SINE Alu -20 293 1 1362 174 114 0 chr17 9148453 9148734 -76289746 - L1MA7 LINE L1 -241 6050 5738 1218 139 32 5 chr17 9148735 9148951 -76289529 + L1MA8 LINE L1 6070 6291 0 2158 101 0 0 chr17 9148954 9149231 -76289249 + AluSc SINE Alu 1 277 -32 551 135 10 0 chr17 9149231 9149327 -76289153 + GA-rich Low_complexity Low_complexity 2 98 0 2103 127 10 0 chr17 9149911 9150210 -76288270 + AluSq SINE Alu 1 302 -11 1259 196 4 21 chr17 9150505 9150745 -76287735 - MER46A DNA MER2_type 0 236 1 2241 114 7 0 chr17 9151164 9151470 -76287010 - AluSp SINE Alu -5 308 1 2089 144 0 3 chr17 9151672 9151970 -76286510 - AluSx SINE Alu -13 299 3 1482 64 0 11 chr17 9151983 9152198 -76286282 - AluYa5 SINE Alu 0 310 98 231 37 0 0 chr17 9152376 9152403 -76286077 - L1P LINE L1 -1513 4633 4607 3983 34 2 0 chr17 9152403 9152851 -76285629 + L1PA4 LINE L1 5704 6152 -3 6611 52 16 4 chr17 9153555 9154367 -76284113 - L1PA7 LINE L1 0 6154 5333 189 0 0 0 chr17 9154511 9154532 -76283948 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 2428 81 0 3 chr17 9154628 9154938 -76283542 - AluY SINE Alu -2 309 1 5987 191 45 50 chr17 9154944 9155128 -76283352 + L1MC1 LINE L1 4509 4692 -1641 835 105 0 53 chr17 9155128 9155261 -76283219 + L1PA8 LINE L1 6030 6155 -17 5987 191 45 50 chr17 9155261 9155915 -76282565 + L1MC1 LINE L1 4692 5347 -986 1908 98 68 0 chr17 9155915 9156235 -76282245 + AluSx SINE Alu 1 338 0 5987 191 45 50 chr17 9156235 9156859 -76281621 + L1MC1 LINE L1 5347 5964 -369 2094 105 54 7 chr17 9156859 9157153 -76281327 + AluSc SINE Alu 1 308 -1 5987 191 45 50 chr17 9157153 9157521 -76280959 + L1MC1 LINE L1 5964 6332 -1 1567 178 21 7 chr17 9157531 9157812 -76280668 + AluJo SINE Alu 3 287 -25 180 0 0 0 chr17 9157813 9157833 -76280647 + (CA)n Simple_repeat Simple_repeat 2 21 0 668 294 65 0 chr17 9157874 9158075 -76280405 - MIR SINE MIR -31 231 18 1966 152 0 0 chr17 9158492 9158781 -76279699 + AluSx SINE Alu 1 289 -23 15722 199 31 35 chr17 9159265 9161143 -76277337 + L1MA5A LINE L1 77 1962 -4826 1990 151 0 7 chr17 9161143 9161448 -76277032 - AluSx SINE Alu -9 303 1 15722 199 31 35 chr17 9161448 9161786 -76276694 + L1MA5A LINE L1 1962 2300 -4488 2215 115 0 13 chr17 9161786 9162100 -76276380 + AluSg SINE Alu 1 310 0 15722 199 31 35 chr17 9162100 9165286 -76273194 + L1MA5A LINE L1 2300 5484 -1304 1566 167 72 0 chr17 9165286 9165549 -76272931 - AluSg SINE Alu -15 295 14 15722 199 31 35 chr17 9165549 9166039 -76272441 + L1MA5A LINE L1 5484 5975 -813 656 174 191 0 chr17 9166039 9166154 -76272326 + FLAM_A SINE Alu 1 137 -5 6264 122 23 9 chr17 9166169 9167137 -76271343 + L1MA5A LINE L1 5958 6938 -1 2317 100 3 3 chr17 9167142 9167452 -76271028 + AluSq SINE Alu 1 310 -3 219 69 0 0 chr17 9168330 9168359 -76270121 + (TTCA)n Simple_repeat Simple_repeat 3 31 0 1832 158 0 3 chr17 9168359 9168643 -76269837 - AluJo SINE Alu -29 283 1 1594 43 0 5 chr17 9168849 9169037 -76269443 + AluY SINE Alu 25 211 -100 706 97 0 39 chr17 9169037 9169140 -76269340 + L1MB5 LINE L1 6075 6173 -1 252 321 27 0 chr17 9169163 9169275 -76269205 + L1MC/D LINE L1 5797 5911 -1897 370 159 23 0 chr17 9169307 9169395 -76269085 + GA-rich Low_complexity Low_complexity 1 90 0 316 246 45 55 chr17 9169768 9169878 -76268602 + LTR67 LTR ERVL 443 551 -6 1126 289 66 23 chr17 9169953 9170431 -76268049 - L1ME LINE L1 -519 5645 5127 2180 128 0 0 chr17 9170431 9170727 -76267753 - AluSx SINE Alu -16 296 1 1126 289 66 23 chr17 9170727 9170938 -76267542 - L1ME LINE L1 -1037 5127 4927 21 0 0 0 chr17 9171209 9171230 -76267250 + AT_rich Low_complexity Low_complexity 1 21 0 289 335 45 28 chr17 9171252 9171607 -76266873 + L1M4 LINE L1 4390 4750 -1396 368 303 28 14 chr17 9171634 9171776 -76266704 - MER87 LTR ERV1 0 541 398 1051 163 33 23 chr17 9172201 9172399 -76266081 - L1MA9 LINE L1 -1 6311 6109 2279 96 3 10 chr17 9172399 9172712 -76265768 - AluSq SINE Alu -2 311 1 1051 163 33 23 chr17 9172712 9172728 -76265752 - L1MA9 LINE L1 -203 6109 6095 497 125 0 57 chr17 9172729 9172817 -76265663 + L1MB1 LINE L1 5806 5888 -301 439 231 231 8 chr17 9172954 9173084 -76265396 + MER5A DNA MER1_type 24 182 -7 2085 99 0 18 chr17 9173177 9173459 -76265021 + AluSg SINE Alu 1 277 -33 180 0 0 0 chr17 9173459 9173479 -76265001 + (CA)n Simple_repeat Simple_repeat 1 20 0 2317 89 3 10 chr17 9174071 9174385 -76264095 + AluSx SINE Alu 1 312 0 6089 122 14 2 chr17 9174654 9175608 -76262872 - L1PA13 LINE L1 0 6163 5195 488 214 10 10 chr17 9175705 9175808 -76262672 - MER5B DNA MER1_type -1 177 75 926 159 0 41 chr17 9175828 9175869 -76262611 - L1 LINE L1 -2018 4128 4087 2672 137 167 30 chr17 9175869 9176409 -76262071 + LTR18B LTR ERVL 1 614 0 926 159 0 41 chr17 9176409 9176537 -76261943 - L1 LINE L1 -2059 4087 3966 767 74 21 0 chr17 9176564 9176659 -76261821 - AluSp/q SINE Alu -15 298 202 1718 136 4 0 chr17 9176659 9176916 -76261564 + AluSx SINE Alu 50 307 -5 2422 96 3 0 chr17 9177240 9177552 -76260928 + AluSq SINE Alu 1 313 0 520 172 0 0 chr17 9178329 9178416 -76260064 - MER5B DNA MER1_type 0 178 92 250 325 35 9 chr17 9178629 9178743 -76259737 - MLT1K LTR MaLR -364 224 108 2335 98 3 3 chr17 9178820 9179127 -76259353 - AluSp SINE Alu -6 307 1 331 263 45 23 chr17 9179203 9179336 -76259144 - L1MC4a LINE L1 -1916 5892 5757 1893 138 7 7 chr17 9179386 9179677 -76258803 + AluJo SINE Alu 2 292 -20 2847 147 29 27 chr17 9179829 9179970 -76258510 - L1MB8 LINE L1 -15 6163 6024 2267 86 0 25 chr17 9179970 9180284 -76258196 + AluSq SINE Alu 1 306 -7 2847 147 29 27 chr17 9180284 9180658 -76257822 - L1MB8 LINE L1 -154 6024 5647 642 207 59 0 chr17 9181095 9181230 -76257250 + MER5A DNA MER1_type 7 149 -40 2282 114 0 0 chr17 9181239 9181545 -76256935 - AluSx SINE Alu -6 306 1 1647 123 0 0 chr17 9181549 9181785 -76256695 + AluSq SINE Alu 78 313 0 1728 110 8 0 chr17 9182683 9182919 -76255561 - AluSx SINE Alu -13 299 62 22 35 0 0 chr17 9183429 9183458 -76255022 + AT_rich Low_complexity Low_complexity 1 29 0 610 82 20 0 chr17 9183804 9183902 -76254578 + (TA)n Simple_repeat Simple_repeat 1 100 0 392 255 131 56 chr17 9184002 9184269 -76254211 - L1MC4a LINE L1 -375 5746 5460 2071 133 0 3 chr17 9184300 9184593 -76253887 - AluJb SINE Alu -14 298 7 1200 194 15 0 chr17 9184680 9184886 -76253594 - MER58A DNA MER1_type -15 209 1 2212 100 3 0 chr17 9185136 9185427 -76253053 + AluSx SINE Alu 1 292 -20 4058 131 63 44 chr17 9185863 9186156 -76252324 + MER49 LTR ERV1 1 287 -636 2056 109 41 10 chr17 9186156 9186450 -76252030 + AluSx SINE Alu 1 303 -9 4058 131 63 44 chr17 9186450 9186880 -76251600 + MER49 LTR ERV1 287 738 -185 2201 102 0 0 chr17 9186880 9187192 -76251288 - AluSx SINE Alu 0 312 1 321 233 189 0 chr17 9189602 9189692 -76248788 - MIR SINE MIR -57 151 45 2474 63 3 10 chr17 9190164 9190465 -76248015 + AluSp SINE Alu 1 299 -14 21 36 0 0 chr17 9190618 9190646 -76247834 + AT_rich Low_complexity Low_complexity 1 28 0 301 230 81 54 chr17 9190646 9190700 -76247780 - L1ME4a LINE L1 -249 5872 5821 2184 115 3 16 chr17 9190700 9191012 -76247468 - AluSx SINE Alu -4 308 1 301 230 81 54 chr17 9191012 9191105 -76247375 - L1ME4a LINE L1 -300 5821 5721 384 192 0 64 chr17 9191268 9191320 -76247160 - L1ME4a LINE L1 -483 5638 5591 4123 93 9 52 chr17 9191320 9191957 -76246523 - MER4B LTR ERV1 0 610 1 384 192 0 64 chr17 9191957 9191982 -76246498 - L1ME4a LINE L1 -530 5591 5566 181 315 54 45 chr17 9191993 9192104 -76246376 - MIR SINE MIR -55 153 42 2279 94 0 0 chr17 9192293 9192570 -76245910 + AluSg SINE Alu 1 277 -33 182 62 31 0 chr17 9192572 9192604 -76245876 + (CAAAA)n Simple_repeat Simple_repeat 1 33 0 286 209 48 38 chr17 9192960 9193065 -76245415 - L1MC5 LINE L1 -58 7903 7798 2330 88 3 7 chr17 9193068 9193362 -76245118 - AluSx SINE Alu -14 298 6 901 102 0 8 chr17 9193381 9193509 -76244971 - AluSg/x SINE Alu -10 302 176 568 206 23 39 chr17 9193604 9193769 -76244711 + MER5B DNA MER1_type 15 189 0 200 176 0 68 chr17 9194453 9194601 -76243879 + (TA)n Simple_repeat Simple_repeat 2 139 0 2259 101 7 3 chr17 9195026 9195334 -76243146 - AluSg SINE Alu -1 309 1 565 251 222 21 chr17 9195552 9195831 -76242649 + L2 LINE L2 2941 3275 -38 750 247 80 13 chr17 9195861 9196100 -76242380 + MIR SINE MIR 2 256 -6 2449 65 3 0 chr17 9196201 9196493 -76241987 + AluY SINE Alu 1 293 -18 294 194 118 91 chr17 9196873 9197014 -76241466 - MER58 DNA MER1_type 0 2420 2284 2171 125 3 0 chr17 9197014 9197309 -76241171 + AluSx SINE Alu 1 296 -16 294 194 118 91 chr17 9197309 9197362 -76241118 - MER58 DNA MER1_type -136 2284 28 451 277 91 29 chr17 9197423 9197697 -76240783 - L1MC4a LINE L1 -1237 6571 6281 * 4751 114 16 57 chr17 9197688 9198192 -76240288 - L1PA13 LINE L1 -2 6161 5701 2369 96 0 0 chr17 9198192 9198495 -76239985 - AluSq SINE Alu -10 303 1 4751 114 16 57 chr17 9198495 9198795 -76239685 - L1PA13 LINE L1 -462 5701 5390 212 229 33 33 chr17 9200583 9200644 -76237836 - MER5A DNA MER1_type -84 105 45 277 279 54 9 chr17 9200958 9201069 -76237411 - L3 LINE CR1 -1119 458 343 4755 112 48 36 chr17 9201524 9202294 -76236186 + MER4E LTR ERV1 1 779 0 810 118 0 8 chr17 9202410 9202529 -76235951 + FLAM_C SINE Alu 1 118 -15 23 0 0 0 chr17 9202687 9202710 -76235770 + AT_rich Low_complexity Low_complexity 1 23 0 16011 140 25 24 chr17 9202889 9204995 -76233485 + Tigger2 DNA MER2_type 28 2129 -589 2208 93 3 7 chr17 9204995 9205284 -76233196 + AluSc SINE Alu 3 290 -19 16011 140 25 24 chr17 9205284 9205802 -76232678 + Tigger2 DNA MER2_type 2129 2659 -59 2394 82 0 3 chr17 9205802 9206107 -76232373 + AluSg SINE Alu 1 304 -6 16011 140 25 24 chr17 9206107 9206168 -76232312 + Tigger2 DNA MER2_type 2659 2718 0 690 217 123 77 chr17 9206180 9206636 -76231844 - HAL1 LINE L1 -167 2340 1864 702 220 52 36 chr17 9206877 9207094 -76231386 - LTR41 LTR ERVL -553 242 1 21 57 0 0 chr17 9207293 9207328 -76231152 + AT_rich Low_complexity Low_complexity 1 35 0 2334 89 0 3 chr17 9207328 9207620 -76230860 + AluSp SINE Alu 1 291 -22 249 33 0 0 chr17 9207624 9207654 -76230826 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 278 281 68 52 chr17 9208142 9208359 -76230121 + MIR SINE MIR 3 224 -38 2430 82 0 7 chr17 9209046 9209351 -76229129 + AluSx SINE Alu 1 303 -9 2478 69 7 0 chr17 9209353 9209659 -76228821 + AluY SINE Alu 1 308 -3 1847 183 0 0 chr17 9210329 9210640 -76227840 - AluSq SINE Alu 0 313 3 2412 102 0 0 chr17 9212215 9212528 -76225952 - AluSq SINE Alu 0 313 1 1546 181 72 3 chr17 9212840 9213133 -76225347 + MER39 LTR ERV1 1 313 -394 459 172 21 0 chr17 9213133 9213226 -76225254 + FLAM_C SINE Alu 49 143 0 358 218 13 13 chr17 9213226 9213304 -76225176 + GA-rich Low_complexity Low_complexity 1 78 0 732 120 14 21 chr17 9213306 9213448 -76225032 + (GGAA)n Simple_repeat Simple_repeat 3 143 0 1122 157 6 0 chr17 9213449 9213621 -76224859 + AluJb SINE Alu 129 301 -11 1615 130 8 15 chr17 9213621 9213883 -76224597 + MER39 LTR ERV1 307 566 -141 672 92 49 37 chr17 9213884 9214048 -76224432 + CT-rich Low_complexity Low_complexity 4 169 0 213 57 0 94 chr17 9214059 9214112 -76224368 + (TTCTCC)n Simple_repeat Simple_repeat 4 51 0 2430 82 10 0 chr17 9214113 9214418 -76224062 - AluSp SINE Alu -5 308 1 835 200 7 7 chr17 9214419 9214574 -76223906 + MER39 LTR ERV1 553 707 0 440 275 87 115 chr17 9214728 9214874 -76223606 - LTR67 LTR ERVL 0 557 408 2031 145 30 0 chr17 9214874 9215171 -76223309 + AluJb SINE Alu 1 306 -6 440 275 87 115 chr17 9215171 9215563 -76222917 - LTR67 LTR ERVL -149 408 34 870 225 6 11 chr17 9215666 9215844 -76222636 - MER45A DNA AcHobo 0 178 2 974 148 0 7 chr17 9216026 9216175 -76222305 - Tigger5 DNA MER2_type 0 2323 2176 2566 40 0 0 chr17 9216275 9216571 -76221909 + AluY SINE Alu 16 311 0 386 286 41 7 chr17 9216589 9216736 -76221744 - L1ME4a LINE L1 -259 5862 5711 883 254 152 55 chr17 9216744 9217126 -76221354 - LTR41 LTR ERVL -9 764 346 1470 186 0 58 chr17 9217299 9217461 -76221019 - AluJo SINE Alu -19 293 156 2379 77 0 10 chr17 9217461 9217761 -76220719 - AluY SINE Alu -14 297 1 1470 186 0 58 chr17 9217761 9217909 -76220571 - AluJo SINE Alu -156 156 1 392 183 0 0 chr17 9217909 9217980 -76220500 - LTR41 LTR ERVL -702 71 1 255 309 21 0 chr17 9217987 9218084 -76220396 - L1ME4a LINE L1 -410 5711 5613 21 36 0 0 chr17 9218237 9218265 -76220215 + AT_rich Low_complexity Low_complexity 1 28 0 220 338 146 20 chr17 9219580 9219794 -76218686 - MIR3 SINE MIR -12 250 12 2118 106 21 3 chr17 9219914 9220198 -76218282 + AluSg SINE Alu 5 293 -17 2229 110 0 3 chr17 9220587 9220888 -76217592 + AluSg SINE Alu 1 300 -10 371 189 0 0 chr17 9221184 9221258 -76217222 + MER5B DNA MER1_type 2 75 -103 200 176 0 39 chr17 9221258 9221309 -76217171 + T-rich Low_complexity Low_complexity 2 50 0 1922 187 19 83 chr17 9221334 9221398 -76217082 - MLT1D LTR MaLR 0 505 438 2259 98 0 0 chr17 9221398 9221683 -76216797 + AluSx SINE Alu 1 285 -27 234 0 9 0 chr17 9221683 9221753 -76216727 + (CA)n Simple_repeat Simple_repeat 2 27 0 249 33 0 0 chr17 9221752 9221782 -76216698 + (TC)n Simple_repeat Simple_repeat 2 31 0 1922 187 19 83 chr17 9221753 9222231 -76216249 - MLT1D LTR MaLR -65 440 1 2368 92 3 0 chr17 9222235 9222530 -76215950 - AluSq SINE Alu -17 296 1 450 210 0 10 chr17 9222547 9222647 -76215833 + MER5B DNA MER1_type 80 178 0 1585 170 0 28 chr17 9223723 9224005 -76214475 - AluJb SINE Alu -37 275 2 875 219 136 24 chr17 9224192 9224443 -76214037 - L1MC4 LINE L1 -1037 7005 6727 530 234 226 13 chr17 9224455 9224690 -76213790 - HAL1 LINE L1 -1018 1489 1205 2310 108 0 0 chr17 9224691 9224979 -76213501 + AluSx SINE Alu 3 290 -22 254 313 67 13 chr17 9225022 9225172 -76213308 - L1M4 LINE L1 -1880 4266 4109 352 293 14 33 chr17 9225259 9225474 -76213006 - L1M4 LINE L1 -2248 3898 3688 2399 41 41 0 chr17 9225907 9226197 -76212283 - AluY SINE Alu -9 302 1 201 179 60 45 chr17 9226868 9226935 -76211545 + L3 LINE CR1 1296 1363 -214 506 63 13 0 chr17 9227930 9228009 -76210471 + (TA)n Simple_repeat Simple_repeat 2 81 0 2091 117 38 0 chr17 9228019 9228310 -76210170 + AluSx SINE Alu 1 302 -10 232 115 0 135 chr17 9228818 9228837 -76209643 - Alu SINE Alu -157 151 131 2508 67 0 0 chr17 9228837 9229135 -76209345 - AluY SINE Alu -13 298 1 232 115 0 135 chr17 9229135 9229167 -76209313 - Alu SINE Alu -177 131 107 2537 82 0 0 chr17 9229824 9230127 -76208353 - AluSx SINE Alu -9 303 1 2093 124 10 26 chr17 9230740 9231047 -76207433 - AluSx SINE Alu -10 302 1 2414 91 0 7 chr17 9231298 9231607 -76206873 - AluSg SINE Alu -3 307 1 27 0 0 0 chr17 9231609 9231636 -76206844 + AT_rich Low_complexity Low_complexity 1 27 0 2138 123 3 0 chr17 9231672 9231987 -76206493 - AluSg SINE Alu 0 310 1 2284 78 0 0 chr17 9232212 9232494 -76205986 - AluY SINE Alu -3 308 27 357 292 167 16 chr17 9232662 9232854 -76205626 - HAL1 LINE L1 -586 1921 1701 256 293 171 29 chr17 9233199 9233339 -76205141 - MIR3 SINE MIR -28 180 21 2258 90 0 3 chr17 9233683 9233971 -76204509 + AluSx SINE Alu 1 287 -25 2349 86 0 10 chr17 9234553 9234854 -76203626 - AluY SINE Alu -13 298 1 211 219 0 0 chr17 9235552 9235593 -76202887 - MER5B DNA MER1_type -137 41 1 2087 100 7 42 chr17 9235962 9236272 -76202208 + AluSx SINE Alu 3 301 -11 390 270 158 13 chr17 9236674 9236826 -76201654 + MER5A DNA MER1_type 10 183 -6 2361 60 7 0 chr17 9236851 9237167 -76201313 - AluY SINE Alu 0 318 1 2216 121 3 13 chr17 9237171 9237486 -76200994 - AluSx SINE Alu 0 312 1 233 315 47 24 chr17 9237552 9237679 -76200801 - MER5B DNA MER1_type -48 130 1 233 260 301 7 chr17 9237731 9237877 -76200603 - MIR SINE MIR -24 238 50 387 293 45 57 chr17 9241515 9241672 -76196808 - L2 LINE L2 -1 3271 3117 383 260 130 21 chr17 9242158 9242350 -76196130 - MLT1J2 LTR MaLR -234 216 4 2283 83 7 20 chr17 9242515 9242815 -76195665 + AluSq SINE Alu 1 296 -17 427 310 114 41 chr17 9243074 9243364 -76195116 - MLT1L LTR MaLR -5 610 300 1184 283 85 37 chr17 9243433 9243834 -76194646 - L1MC4a LINE L1 -1750 6058 5621 2695 50 0 0 chr17 9243834 9244137 -76194343 + AluY SINE Alu 5 307 -4 1184 283 85 37 chr17 9244137 9244297 -76194183 - L1MC4a LINE L1 -2187 5621 5470 296 299 130 54 chr17 9244384 9244764 -76193716 - L1MC4a LINE L1 -1071 5075 4644 2296 90 3 3 chr17 9244764 9245053 -76193427 - AluSc SINE Alu -20 289 1 296 299 130 54 chr17 9245053 9245187 -76193293 - L1MC4a LINE L1 -1502 4644 4522 279 0 0 0 chr17 9245195 9245226 -76193254 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 276 279 72 53 chr17 9245561 9245769 -76192711 - MLT1L LTR MaLR -398 217 6 2296 244 89 64 chr17 9246237 9246401 -76192079 + L1MC4a LINE L1 4993 5151 -995 2589 43 0 10 chr17 9246401 9246703 -76191777 + AluY SINE Alu 1 299 -12 2296 244 89 64 chr17 9246703 9247416 -76191064 + L1MC4a LINE L1 5151 5098 -1048 2333 78 0 3 chr17 9247416 9247763 -76190717 - AluSq SINE Alu 0 346 1 2296 244 89 64 chr17 9247763 9248074 -76190406 + L1MC4a LINE L1 5097 5399 -747 873 152 49 0 chr17 9248108 9248272 -76190208 + L1P LINE L1 3726 3897 -2249 304 247 0 0 chr17 9248727 9248804 -76189676 - L1PB4 LINE L1 -2 6154 6078 2241 120 0 0 chr17 9248843 9249143 -76189337 + AluSg SINE Alu 1 300 -10 2141 129 0 3 chr17 9249379 9249681 -76188799 - AluSg SINE Alu -9 301 1 854 119 0 0 chr17 9250163 9250281 -76188199 - AluSq/x SINE Alu -195 118 1 208 230 11 103 chr17 9250589 9250676 -76187804 + L2 LINE L2 3186 3264 -8 2395 77 0 7 chr17 9250947 9251247 -76187233 - AluSc SINE Alu -11 298 1 26 0 0 0 chr17 9251518 9251544 -76186936 + AT_rich Low_complexity Low_complexity 1 26 0 23 68 0 0 chr17 9251583 9251627 -76186853 + AT_rich Low_complexity Low_complexity 1 44 0 2352 89 3 7 chr17 9251876 9252179 -76186301 + AluSx SINE Alu 1 302 -10 714 203 0 0 chr17 9252269 9252392 -76186088 + FLAM_C SINE Alu 2 124 -9 2010 222 13 57 chr17 9252449 9252812 -76185668 - L1ME1 LINE L1 -5 6230 5902 2376 91 3 10 chr17 9252812 9253119 -76185361 - AluSq SINE Alu -8 305 1 2010 222 13 57 chr17 9253119 9253355 -76185125 - L1ME1 LINE L1 -333 5902 5657 1842 162 74 16 chr17 9253366 9253743 -76184737 - L1MA8 LINE L1 -5 6286 5888 1277 132 55 9 chr17 9253732 9253951 -76184529 - L1MA8 LINE L1 -633 5658 5430 * 2355 81 14 0 chr17 9253953 9254248 -76184232 - AluY SINE Alu -12 299 1 2110 98 44 0 chr17 9254250 9254525 -76183955 - AluSx SINE Alu -19 293 7 1427 232 124 25 chr17 9254525 9254916 -76183564 - L1ME1 LINE L1 -1307 4908 4452 2322 82 7 10 chr17 9254916 9255219 -76183261 - AluY SINE Alu -9 302 1 1427 232 124 25 chr17 9255219 9255344 -76183136 - L1ME1 LINE L1 -1763 4452 4341 1410 206 61 43 chr17 9255354 9255747 -76182733 - L1ME1 LINE L1 -5968 428 29 2263 91 7 3 chr17 9256242 9256540 -76181940 + AluSc SINE Alu 1 299 -10 2025 87 4 0 chr17 9257219 9257471 -76181009 - AluSx SINE Alu -59 253 1 603 216 102 41 chr17 9257471 9257894 -76180586 - HAL1b LINE L1 -318 1030 531 2403 100 0 0 chr17 9257894 9258195 -76180285 - AluSx SINE Alu -11 301 1 603 216 102 41 chr17 9258195 9258302 -76180178 - HAL1b LINE L1 -817 531 432 515 222 7 42 chr17 9259058 9259202 -76179278 - MER5A DNA MER1_type -25 164 26 499 150 0 70 chr17 9259409 9259509 -76178971 + AluJo SINE Alu 69 161 -151 1220 185 15 102 chr17 9259532 9259857 -76178623 + AluJo SINE Alu 1 297 -15 4713 76 136 57 chr17 9260279 9261045 -76177435 - LTR12 LTR ERV1 0 826 1 492 314 52 16 chr17 9261204 9261395 -76177085 + MIR SINE MIR 8 205 -57 216 208 0 0 chr17 9261395 9261436 -76177044 + (TA)n Simple_repeat Simple_repeat 2 45 -9 361 82 262 0 chr17 9261436 9261497 -76176983 + MADE1 DNA Mariner 4 80 0 216 208 0 0 chr17 9261497 9261508 -76176972 + (TA)n Simple_repeat Simple_repeat 44 54 0 23 33 0 0 chr17 9261953 9261983 -76176497 + AT_rich Low_complexity Low_complexity 1 30 0 2420 92 3 3 chr17 9262072 9262376 -76176104 - AluSx SINE Alu -8 304 1 535 99 0 0 chr17 9262777 9262848 -76175632 + AluS SINE Alu 2 72 -241 540 200 17 8 chr17 9262950 9263070 -76175410 - MIR SINE MIR -90 172 52 2385 94 0 0 chr17 9263448 9263745 -76174735 - AluSg SINE Alu -13 297 1 369 288 114 8 chr17 9263865 9263997 -76174483 + MIR SINE MIR 3 148 -114 3640 139 70 23 chr17 9265800 9265957 -76172523 + MER39 LTR ERV1 1 149 -558 2340 93 7 3 chr17 9265957 9266259 -76172221 - AluSg SINE Alu -7 303 1 3640 139 70 23 chr17 9266259 9266712 -76171768 + MER39 LTR ERV1 149 640 -67 1377 135 64 8 chr17 9266706 9267036 -76171444 - MER39 LTR ERV1 -295 412 2 * 403 273 88 67 chr17 9267038 9267379 -76171101 - LTR33 LTR ERVL -127 394 47 2206 89 7 0 chr17 9267541 9267857 -76170623 - AluSg SINE Alu 0 319 2 1881 128 0 51 chr17 9267918 9268234 -76170246 - AluSx SINE Alu 0 301 1 1485 176 66 4 chr17 9268386 9268659 -76169821 - Tigger3(Golem) DNA MER2_type -10 3019 2730 2369 105 0 0 chr17 9268659 9268963 -76169517 + AluSg SINE Alu 1 304 -6 301 262 0 0 chr17 9268997 9269058 -76169422 - Tigger3(Golem) DNA MER2_type -2956 73 13 1644 148 48 90 chr17 9269093 9269311 -76169169 - MER47A DNA MER2_type -1958 365 168 2350 74 3 0 chr17 9269311 9269596 -76168884 + AluSg SINE Alu 1 286 -24 1644 148 48 90 chr17 9269596 9269754 -76168726 - MER47A DNA MER2_type -2155 168 5 186 43 0 0 chr17 9269754 9269777 -76168703 + (TA)n Simple_repeat Simple_repeat 2 24 0 479 291 67 22 chr17 9269891 9270048 -76168432 - L1MC/D LINE L1 -2211 5597 5430 453 152 13 0 chr17 9270048 9270127 -76168353 - MER116 DNA Mariner 0 80 1 479 291 67 22 chr17 9270127 9270148 -76168332 - L1MC/D LINE L1 -2378 5430 5411 2116 68 62 52 chr17 9270165 9270474 -76168006 - AluSp SINE Alu -1 312 1 436 265 74 55 chr17 9270479 9270984 -76167496 - L1MC/D LINE L1 -750 5396 4900 192 77 0 0 chr17 9271224 9271250 -76167230 + (CA)n Simple_repeat Simple_repeat 2 27 0 2401 72 3 0 chr17 9271397 9271687 -76166793 - AluSc SINE Alu -15 294 4 870 218 16 73 chr17 9271705 9271953 -76166527 - L1ME1 LINE L1 0 6166 5933 427 303 99 68 chr17 9272292 9272913 -76165567 + L1M4 LINE L1 3144 3744 -2402 2273 65 10 39 chr17 9272913 9273249 -76165231 + AluY SINE Alu 1 311 0 427 303 99 68 chr17 9273249 9273570 -76164910 + L1M4 LINE L1 3744 4054 -2092 2450 84 7 0 chr17 9273570 9273879 -76164601 + AluY SINE Alu 1 311 0 427 303 99 68 chr17 9273879 9274207 -76164273 + L1M4 LINE L1 4054 4472 -1674 2472 84 3 0 chr17 9274341 9274652 -76163828 - AluSp SINE Alu -1 312 1 2485 67 3 3 chr17 9274962 9275262 -76163218 + AluY SINE Alu 3 302 -9 2286 99 0 0 chr17 9275849 9276172 -76162308 - AluSq SINE Alu 0 323 1 1218 170 4 39 chr17 9276887 9277116 -76161364 - AluJo SINE Alu -91 221 1 189 205 26 0 chr17 9277116 9277155 -76161325 - L2 LINE L2 -12 3260 3221 246 62 0 0 chr17 9277428 9277460 -76161020 + (T)n Simple_repeat Simple_repeat 1 32 0 266 340 21 21 chr17 9277559 9277700 -76160780 - MIR SINE MIR 0 262 122 333 221 26 0 chr17 9277783 9277860 -76160620 - MIR SINE MIR -128 134 56 1390 136 47 101 chr17 9278186 9278503 -76159977 - AluSq SINE Alu -13 300 1 2423 66 0 0 chr17 9278505 9278793 -76159687 - AluY SINE Alu -23 288 1 1195 82 0 7 chr17 9278793 9278939 -76159541 - AluSq/x SINE Alu -167 145 1 2044 108 7 4 chr17 9278960 9279239 -76159241 - AluSg SINE Alu -30 280 1 194 327 159 9 chr17 9279291 9279404 -76159076 - L2 LINE L2 -10 3262 3133 1675 164 39 96 chr17 9279598 9280006 -76158474 - MLT1B LTR MaLR -3 387 3 2420 63 0 13 chr17 9280637 9280936 -76157544 + AluY SINE Alu 1 295 -16 406 324 54 14 chr17 9281342 9281564 -76156916 + MIR SINE MIR 32 262 0 1768 150 34 7 chr17 9283241 9283534 -76154946 - AluJb SINE Alu -11 301 1 3385 280 78 58 chr17 9284425 9284899 -76153581 - HAL1 LINE L1 -11 2496 2033 1764 71 0 18 chr17 9284899 9285125 -76153355 - AluY SINE Alu -7 304 83 3385 280 78 58 chr17 9285125 9285995 -76152485 - HAL1 LINE L1 -474 2033 1182 2433 43 0 3 chr17 9285995 9286322 -76152158 - AluY SINE Alu 0 326 1 3385 280 78 58 chr17 9286322 9286542 -76151938 - HAL1 LINE L1 -1325 1182 968 219 103 0 0 chr17 9286542 9286581 -76151899 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 3385 280 78 58 chr17 9286581 9286654 -76151826 - HAL1 LINE L1 -1539 968 898 2191 112 7 0 chr17 9286654 9286949 -76151531 + AluSc SINE Alu 1 297 -12 3385 280 78 58 chr17 9286949 9287442 -76151038 - HAL1 LINE L1 -1609 898 317 297 188 40 114 chr17 9287467 9287616 -76150864 - HAL1 LINE L1 -2276 231 94 344 321 49 6 chr17 9287719 9287881 -76150599 - MIR SINE MIR -87 175 7 311 283 0 28 chr17 9289396 9289502 -76148978 + MER5A DNA MER1_type 36 138 -51 350 270 0 30 chr17 9289577 9289677 -76148803 + MER5A DNA MER1_type 37 133 -56 2191 104 3 0 chr17 9291133 9291431 -76147049 - AluSg SINE Alu -1 309 11 2060 99 0 7 chr17 9292268 9292572 -76145908 + AluY SINE Alu 1 302 0 2178 100 0 0 chr17 9292769 9293050 -76145430 - AluSx SINE Alu -31 281 1 554 382 60 3 chr17 9293244 9293597 -76144883 + L2 LINE L2 2333 2705 -609 250 269 45 0 chr17 9293834 9293901 -76144579 + MIR SINE MIR 100 169 -93 462 328 85 51 chr17 9293936 9294133 -76144347 - L1M4 LINE L1 -1555 4591 4402 1932 127 24 0 chr17 9294133 9294424 -76144056 - AluSq SINE Alu -15 298 1 462 328 85 51 chr17 9294424 9294446 -76144034 - L1M4 LINE L1 -1744 4402 4382 1566 167 50 20 chr17 9294446 9294745 -76143735 - AluJb SINE Alu 0 312 5 462 328 85 51 chr17 9294745 9294899 -76143581 - L1M4 LINE L1 -1764 4382 4204 312 320 22 108 chr17 9295217 9295315 -76143165 + MIR SINE MIR 48 153 -109 1970 78 27 96 chr17 9295315 9295647 -76142833 + AluSq SINE Alu 1 309 -4 312 320 22 108 chr17 9295647 9295779 -76142701 + MIR SINE MIR 153 258 -4 624 319 153 28 chr17 9295998 9296230 -76142250 + L2 LINE L2 2251 2453 -860 2216 95 3 7 chr17 9296230 9296536 -76141944 - AluSp SINE Alu -8 305 1 624 319 153 28 chr17 9296536 9297215 -76141265 + L2 LINE L2 2453 3282 -31 1157 168 0 6 chr17 9297590 9297763 -76140717 + FAM SINE Alu 1 172 -3 2285 93 0 6 chr17 9297766 9298077 -76140403 + AluSg SINE Alu 1 309 -1 256 306 229 0 chr17 9298734 9298806 -76139674 - MIR SINE MIR -14 248 194 2246 114 0 0 chr17 9298806 9299114 -76139366 - AluSg SINE Alu -2 308 1 256 306 229 0 chr17 9299114 9299185 -76139295 - MIR SINE MIR -68 194 72 2426 84 3 0 chr17 9299651 9299961 -76138519 + AluSx SINE Alu 1 311 -1 2149 71 0 40 chr17 9299985 9300319 -76138161 - AluY SINE Alu 0 322 1 217 221 81 47 chr17 9301400 9301486 -76136994 - MIR SINE MIR -17 245 157 238 264 207 14 chr17 9302852 9302923 -76135557 - MER5A DNA MER1_type -14 175 119 2373 87 0 0 chr17 9302923 9303232 -76135248 - AluSc SINE Alu 0 309 1 2070 125 3 0 chr17 9303235 9303530 -76134950 - AluSx SINE Alu -16 296 1 238 264 207 14 chr17 9303530 9303594 -76134886 - MER5A DNA MER1_type -71 118 9 210 118 0 0 chr17 9304013 9304047 -76134433 + (TTCA)n Simple_repeat Simple_repeat 3 36 0 337 179 0 0 chr17 9304049 9304105 -76134375 - L2 LINE L2 -9 3304 3249 2190 67 3 35 chr17 9304148 9304460 -76134020 + AluY SINE Alu 1 302 -9 196 371 78 46 chr17 9304551 9304961 -76133519 - L2 LINE L2 -13 3300 2878 2536 47 0 0 chr17 9305495 9305796 -76132684 - AluY SINE Alu -10 301 1 2254 98 0 7 chr17 9306687 9306993 -76131487 - AluSq SINE Alu -7 306 3 263 363 166 14 chr17 9307351 9307574 -76130906 - MIR SINE MIR -2 260 4 487 202 31 175 chr17 9308793 9309016 -76129464 + L2 LINE L2 3118 3308 -5 1906 154 0 16 chr17 9309558 9309870 -76128610 - AluJo SINE Alu -5 307 1 1187 241 93 46 chr17 9310064 9310097 -76128383 - MLT1G1 LTR MaLR -2 588 558 1732 182 0 0 chr17 9310097 9310394 -76128086 + AluJo SINE Alu 1 297 -15 1187 241 93 46 chr17 9310394 9310910 -76127570 - MLT1G1 LTR MaLR -32 558 5 767 255 78 3 chr17 9310914 9311220 -76127260 + L1MC4a LINE L1 5587 5917 -249 2173 64 4 11 chr17 9311221 9311501 -76126979 - AluSp SINE Alu -29 284 7 377 123 0 0 chr17 9311512 9311569 -76126911 - Alu SINE Alu -3 299 243 2171 96 23 0 chr17 9311829 9312131 -76126349 + AluSc SINE Alu 1 309 0 2231 80 0 0 chr17 9314044 9314360 -76124120 - AluSx SINE Alu 0 316 1 1217 168 0 10 chr17 9314368 9314577 -76123903 - AluJo SINE Alu -19 293 87 802 138 0 51 chr17 9314603 9314764 -76123716 - FLAM_C SINE Alu 0 156 3 403 337 76 28 chr17 9315386 9315635 -76122845 - MIR SINE MIR 0 262 2 2136 118 0 3 chr17 9316690 9316996 -76121484 - AluSx SINE Alu -7 305 1 640 265 38 19 chr17 9318072 9318283 -76120197 + L1MC5 LINE L1 7710 7924 -37 433 359 82 5 chr17 9318477 9318672 -76119808 + MIR SINE MIR 44 253 -9 2174 95 0 0 chr17 9319111 9319457 -76119023 - AluSx SINE Alu 0 346 1 338 317 119 61 chr17 9319883 9320006 -76118474 - L2 LINE L2 -38 3234 3120 2197 86 24 0 chr17 9320006 9320296 -76118184 + AluSq SINE Alu 1 297 -16 338 317 119 61 chr17 9320296 9320705 -76117775 - L2 LINE L2 -152 3120 2654 213 121 0 0 chr17 9321384 9321417 -76117063 + (CA)n Simple_repeat Simple_repeat 1 33 0 333 0 0 0 chr17 9321457 9321494 -76116986 + (CA)n Simple_repeat Simple_repeat 1 37 0 399 268 24 65 chr17 9321505 9321673 -76116807 + L1MEd LINE L1 46 206 -5913 736 261 103 0 chr17 9321699 9321894 -76116586 - MER58C DNA MER1_type 0 215 1 2252 83 0 37 chr17 9322060 9322244 -76116236 - AluSq SINE Alu 0 313 145 2436 54 0 0 chr17 9322244 9322539 -76115941 - AluY SINE Alu -16 295 1 2252 83 0 37 chr17 9322539 9322679 -76115801 - AluSq SINE Alu -168 145 1 1056 78 0 0 chr17 9322691 9322820 -76115660 - AluSq/x SINE Alu -183 129 1 595 296 0 18 chr17 9322916 9323085 -76115395 + Charlie4 DNA MER1_type 12 177 -1784 189 250 0 0 chr17 9323273 9323309 -76115171 + MIR SINE MIR 219 254 -8 2242 96 0 10 chr17 9324268 9324581 -76113899 + AluSx SINE Alu 1 310 -2 270 268 188 22 chr17 9324994 9325132 -76113348 - MARNA DNA Mariner -149 437 277 594 294 130 4 chr17 9325678 9325909 -76112571 - MLT1I LTR MaLR -149 260 1 384 322 46 7 chr17 9325909 9326061 -76112419 + MIR SINE MIR 70 227 -35 1902 95 4 0 chr17 9326084 9326336 -76112144 + AluSp SINE Alu 45 297 -16 329 243 14 0 chr17 9327138 9327208 -76111272 + MIR SINE MIR 50 120 -88 1719 85 0 4 chr17 9328065 9328300 -76110180 + AluSg/x SINE Alu 70 303 -7 432 264 193 35 chr17 9332830 9333027 -76105453 + MIR SINE MIR 23 250 -12 24 32 0 0 chr17 9334492 9334523 -76103957 + GC_rich Low_complexity Low_complexity 1 31 0 25 65 0 0 chr17 9334568 9334614 -76103866 + GC_rich Low_complexity Low_complexity 1 46 0 207 0 0 0 chr17 9334700 9334723 -76103757 + (CCCG)n Simple_repeat Simple_repeat 4 26 0 630 209 78 7 chr17 9335749 9335902 -76102578 - MER5A DNA MER1_type -6 183 20 436 141 26 0 chr17 9335980 9336058 -76102422 + MER103 DNA DNA 8 87 -79 1927 118 54 98 chr17 9337188 9337596 -76100884 + MLT1B LTR MaLR 1 390 0 1717 208 3 55 chr17 9338550 9338699 -76099781 + MLT1A1 LTR MaLR 7 162 -203 1485 101 187 30 chr17 9338699 9338966 -76099514 + AluSg1 SINE Alu 1 309 0 1717 208 3 55 chr17 9338966 9339195 -76099285 + MLT1A1 LTR MaLR 162 365 0 2403 79 0 6 chr17 9339437 9339752 -76098728 + AluSq SINE Alu 1 313 0 262 241 9 111 chr17 9343704 9343812 -76094668 + MIR3 SINE MIR 89 185 -23 224 337 92 0 chr17 9345228 9345326 -76093154 + MIR SINE MIR 86 192 -70 476 261 0 0 chr17 9345517 9345697 -76092783 + (CA)n Simple_repeat Simple_repeat 1 180 0 384 211 0 0 chr17 9345739 9345881 -76092599 + (CA)n Simple_repeat Simple_repeat 1 142 0 399 300 70 70 chr17 9346309 9346706 -76091774 + L2 LINE L2 2866 3262 -10 283 211 31 31 chr17 9346751 9346879 -76091601 + (TG)n Simple_repeat Simple_repeat 2 129 0 301 149 28 50 chr17 9346893 9347074 -76091406 + (TG)n Simple_repeat Simple_repeat 1 177 0 431 106 21 50 chr17 9347100 9347241 -76091239 + (TG)n Simple_repeat Simple_repeat 1 137 0 323 138 38 46 chr17 9347272 9347543 -76090937 + (TG)n Simple_repeat Simple_repeat 1 268 0 318 219 12 24 chr17 9348370 9348452 -76090028 - MIR3 SINE MIR -54 154 74 1869 107 27 4 chr17 9349426 9349688 -76088792 - AluSg SINE Alu -9 301 34 182 259 37 0 chr17 9350109 9350163 -76088317 + MIR SINE MIR 65 120 -88 2126 119 0 16 chr17 9351129 9351432 -76087048 - AluSx SINE Alu -14 298 1 257 297 0 0 chr17 9352211 9352275 -76086205 - MIR SINE MIR -112 150 87 287 343 28 0 chr17 9353101 9353209 -76085271 - MIR3 SINE MIR -49 159 49 449 308 38 19 chr17 9354388 9354577 -76083903 - MIR SINE MIR -40 222 32 315 204 187 12 chr17 9356373 9356500 -76081980 - MIR SINE MIR -62 146 16 502 231 17 8 chr17 9356515 9356632 -76081848 - MER5B DNA MER1_type -58 120 3 198 0 0 0 chr17 9356825 9356847 -76081633 + (T)n Simple_repeat Simple_repeat 1 22 0 2125 112 0 16 chr17 9357638 9357941 -76080539 - AluSg SINE Alu -12 298 1 484 250 2 51 chr17 9358138 9358316 -76080164 - MER58B DNA MER1_type 0 341 169 340 323 80 73 chr17 9358348 9358447 -76080033 + HAL1 LINE L1 1114 1211 -1296 1344 170 76 55 chr17 9358447 9358736 -76079744 + AluJo SINE Alu 1 295 -17 340 323 80 73 chr17 9358736 9358924 -76079556 + HAL1 LINE L1 1211 1403 -1104 614 293 22 31 chr17 9358925 9359259 -76079221 + HAL1b LINE L1 427 706 -642 402 21 0 0 chr17 9359404 9359451 -76079029 + (TG)n Simple_repeat Simple_repeat 2 48 0 688 316 105 69 chr17 9359454 9359870 -76078610 + L1ME LINE L1 1856 2255 -3960 2315 79 0 0 chr17 9359870 9360161 -76078319 - AluY SINE Alu -20 291 1 688 316 105 69 chr17 9360161 9361007 -76077473 + L1ME LINE L1 2255 3829 -2386 233 247 13 0 chr17 9361012 9361089 -76077391 + MER116 DNA Mariner 1 78 -2 264 271 105 30 chr17 9362754 9362988 -76075492 + L1ME LINE L1 5290 5541 -649 312 336 15 37 chr17 9362999 9363133 -76075347 + L1ME LINE L1 5589 5719 -471 241 335 159 6 chr17 9363424 9363606 -76074874 - L2 LINE L2 -339 2975 2766 2206 106 3 0 chr17 9363766 9364068 -76074412 - AluSx SINE Alu 0 312 10 339 169 0 0 chr17 9364234 9364305 -76074175 + (TG)n Simple_repeat Simple_repeat 1 71 0 552 323 74 2 chr17 9364353 9364677 -76073803 - L2 LINE L2 -225 3088 2740 2170 100 0 0 chr17 9366450 9366750 -76071730 - AluSg SINE Alu 0 300 1 415 293 28 29 chr17 9367077 9367276 -76071204 + MIR SINE MIR 16 216 -46 270 327 63 25 chr17 9367300 9367459 -76071021 + MARNA DNA Mariner 189 353 -233 393 248 261 13 chr17 9367462 9367615 -76070865 + L2 LINE L2 3119 3309 -4 1700 184 17 0 chr17 9369063 9369356 -76069124 - AluJo SINE Alu -14 298 1 229 111 0 0 chr17 9369843 9369879 -76068601 - MER117 DNA MER1_type -49 148 113 1906 138 17 3 chr17 9370119 9370415 -76068065 + AluSq SINE Alu 13 312 -1 320 133 17 0 chr17 9370418 9370478 -76068002 + GA-rich Low_complexity Low_complexity 2 62 0 393 22 0 0 chr17 9370479 9370525 -76067955 + (GGAA)n Simple_repeat Simple_repeat 3 48 0 253 275 161 55 chr17 9370632 9370850 -76067630 - L3 LINE CR1 -214 1363 1123 2199 111 0 13 chr17 9370869 9371185 -76067295 - AluSx SINE Alu 0 312 1 2381 80 0 0 chr17 9371481 9371792 -76066688 + AluY SINE Alu 1 311 0 1944 116 0 88 chr17 9372441 9372645 -76065835 - AluSg SINE Alu -10 300 134 243 0 0 0 chr17 9372645 9372672 -76065808 + (TG)n Simple_repeat Simple_repeat 2 28 0 1944 116 0 88 chr17 9372672 9372796 -76065684 - AluSg SINE Alu -176 134 1 241 389 37 12 chr17 9373854 9374016 -76064464 + L2 LINE L2 3107 3272 0 1045 272 75 24 chr17 9374910 9375260 -76063220 + MLT1J2 LTR MaLR 14 390 -60 2337 103 3 0 chr17 9375260 9375572 -76062908 + AluSq SINE Alu 1 313 0 1045 272 75 24 chr17 9375572 9375637 -76062843 + MLT1J2 LTR MaLR 390 450 0 1268 244 81 56 chr17 9376199 9376645 -76061835 + LTR16A1 LTR ERVL 1 457 0 2167 121 0 3 chr17 9377012 9377325 -76061155 - AluSx SINE Alu 0 312 1 499 291 11 30 chr17 9377389 9377574 -76060906 + MIR3 SINE MIR 6 187 -21 905 189 20 31 chr17 9377608 9377804 -76060676 + MER63A DNA MER1_type 1 194 -16 202 382 36 6 chr17 9378142 9378307 -76060173 + L3 LINE CR1 1277 1446 -131 232 304 89 37 chr17 9378652 9378787 -76059693 - MIR3 SINE MIR -24 184 43 339 288 7 43 chr17 9379573 9379712 -76058768 + GA-rich Low_complexity Low_complexity 3 136 0 419 219 0 24 chr17 9379768 9379850 -76058630 - MER116 DNA Mariner 0 80 1 777 224 130 0 chr17 9380002 9380194 -76058286 + MER20 DNA MER1_type 1 217 -2 2249 102 0 0 chr17 9380455 9380748 -76057732 - AluSx SINE Alu -19 293 1 2294 89 7 0 chr17 9380757 9381061 -76057419 - AluSp SINE Alu -7 306 1 366 304 127 19 chr17 9381135 9381395 -76057085 + L1MC5 LINE L1 7616 7903 -58 2509 64 3 0 chr17 9381592 9381903 -76056577 - AluSx SINE Alu 0 312 1 786 213 197 0 chr17 9382044 9382227 -76056253 - MER20 DNA MER1_type 0 219 1 722 295 73 7 chr17 9382379 9382681 -76055799 - L1ME LINE L1 -325 5796 5475 443 82 0 0 chr17 9382713 9382774 -76055706 - AluJo SINE Alu -16 296 236 892 158 0 58 chr17 9382774 9382945 -76055535 - AluJo SINE Alu -140 172 12 369 329 76 29 chr17 9383014 9383232 -76055248 - L1ME LINE L1 -759 5387 5181 2261 79 3 0 chr17 9383232 9383523 -76054957 - AluSp SINE Alu -21 292 1 369 329 76 29 chr17 9383523 9383837 -76054643 - L1ME LINE L1 -965 5181 4883 2149 115 0 0 chr17 9383837 9384132 -76054348 - AluSx SINE Alu -17 295 1 369 329 76 29 chr17 9384132 9384692 -76053788 - L1ME LINE L1 -1263 4883 4243 2212 108 0 0 chr17 9385052 9385349 -76053131 + AluSg SINE Alu 1 297 -13 723 227 77 73 chr17 9385365 9385612 -76052868 + MIR SINE MIR 6 253 -9 1954 185 44 31 chr17 9386218 9386256 -76052224 - L1MB5 LINE L1 -1 6173 6137 2175 120 3 0 chr17 9386256 9386555 -76051925 - AluSq SINE Alu -13 300 1 1954 185 44 31 chr17 9386555 9386856 -76051624 - L1MB5 LINE L1 -37 6137 5824 1696 158 0 60 chr17 9386856 9387172 -76051308 - AluJb SINE Alu -15 297 1 1954 185 44 31 chr17 9387172 9387286 -76051194 - L1MB5 LINE L1 -350 5824 5713 415 234 90 0 chr17 9387625 9387736 -76050744 - MIR SINE MIR -54 208 88 606 273 52 5 chr17 9388400 9388594 -76049886 - MER63A DNA MER1_type 0 210 8 236 271 187 32 chr17 9388715 9388870 -76049610 - MIR3 SINE MIR -20 188 10 1418 255 46 26 chr17 9390874 9391333 -76047147 - Charlie4a DNA MER1_type -11 497 30 1752 154 0 20 chr17 9392418 9392711 -76045769 + AluJo SINE Alu 1 287 -25 26 0 0 0 chr17 9392712 9392738 -76045742 + AT_rich Low_complexity Low_complexity 1 26 0 1990 136 0 7 chr17 9394363 9394657 -76043823 + AluSx SINE Alu 1 292 -20 312 355 47 6 chr17 9395473 9395645 -76042835 - MIR3 SINE MIR 0 208 30 2303 86 3 7 chr17 9396487 9396789 -76041691 - AluSq SINE Alu -12 301 1 229 283 166 28 chr17 9397869 9398014 -76040466 + MLT1J LTR MaLR 343 507 -4 269 301 0 0 chr17 9398413 9398516 -76039964 + (CA)n Simple_repeat Simple_repeat 2 104 0 228 371 9 9 chr17 9399056 9399172 -76039308 + MIR3 SINE MIR 86 201 -7 2055 170 20 59 chr17 9399890 9400296 -76038184 + MLT1B LTR MaLR 1 390 0 1010 76 0 0 chr17 9401771 9401902 -76036578 - AluSp/q SINE Alu -9 304 174 535 86 0 0 chr17 9401902 9401972 -76036508 - AluS SINE Alu -243 70 1 521 256 67 0 chr17 9401972 9402200 -76036280 - L1MC/D LINE L1 -758 5388 5199 2081 58 65 0 chr17 9402211 9402486 -76035994 - AluY SINE Alu -18 293 1 2231 102 3 0 chr17 9402514 9402818 -76035662 + AluSp SINE Alu 1 305 -8 405 336 108 9 chr17 9402910 9403234 -76035246 + L2 LINE L2 2859 3214 -99 291 28 0 0 chr17 9403804 9403840 -76034640 + (TG)n Simple_repeat Simple_repeat 2 37 0 459 281 105 7 chr17 9404389 9404542 -76033938 - MIR SINE MIR -1 261 94 2454 78 0 0 chr17 9404813 9405119 -76033361 - AluSx SINE Alu -6 306 1 382 264 47 0 chr17 9405456 9405562 -76032918 - MIR3 SINE MIR -6 202 92 2371 77 3 0 chr17 9406154 9406451 -76032029 - AluSp SINE Alu -15 298 1 25 0 0 0 chr17 9406454 9406479 -76032001 + AT_rich Low_complexity Low_complexity 1 25 0 999 171 11 23 chr17 9406639 9406815 -76031665 + MER5B DNA MER1_type 3 176 -2 2330 96 0 0 chr17 9408060 9408361 -76030119 + AluSx SINE Alu 1 301 -11 552 15 0 0 chr17 9408487 9408552 -76029928 + (TGG)n Simple_repeat Simple_repeat 2 66 0 580 140 13 140 chr17 9410132 9410236 -76028244 + MER45A DNA AcHobo 42 121 -1460 1943 108 0 37 chr17 9410236 9410531 -76027949 - AluSx SINE Alu 0 312 29 580 140 13 140 chr17 9410531 9410583 -76027897 + MER45A DNA AcHobo 121 178 0 399 41 0 0 chr17 9411175 9411224 -76027256 + (TG)n Simple_repeat Simple_repeat 2 50 0 342 0 0 0 chr17 9411516 9411554 -76026926 + (TG)n Simple_repeat Simple_repeat 2 39 0 1504 180 61 44 chr17 9412096 9412457 -76026023 + MLT1B LTR MaLR 19 385 -5 2171 111 0 3 chr17 9412897 9413204 -76025276 - AluSg SINE Alu -4 306 1 331 312 63 43 chr17 9413242 9413494 -76024986 + L2 LINE L2 2764 3034 -238 1734 157 0 17 chr17 9413722 9414031 -76024449 - AluJb SINE Alu 0 304 1 367 312 131 41 chr17 9414059 9414280 -76024200 - L1ME4a LINE L1 -55 6066 5826 1912 146 26 3 chr17 9414297 9414599 -76023881 + AluSx SINE Alu 1 309 -3 620 254 12 129 chr17 9414685 9414864 -76023616 - L1ME4a LINE L1 -369 5752 5554 2154 85 0 4 chr17 9414864 9415182 -76023298 - AluSg SINE Alu 0 317 1 620 254 12 129 chr17 9415182 9415514 -76022966 - L1ME4a LINE L1 -567 5554 5296 288 276 0 87 chr17 9415981 9416108 -76022372 - MIR SINE MIR -63 145 30 223 396 50 22 chr17 9417338 9417477 -76021003 - L2 LINE L2 -9 3263 3121 791 159 0 6 chr17 9417624 9417800 -76020680 + (TGGA)n Simple_repeat Simple_repeat 3 177 0 266 284 0 0 chr17 9417800 9417867 -76020613 + (TAGG)n Simple_repeat Simple_repeat 2 68 0 1146 178 53 0 chr17 9418738 9418946 -76019534 + MER20 DNA MER1_type 1 219 0 2352 71 10 3 chr17 9419062 9419372 -76019108 + AluSp SINE Alu 2 313 0 193 303 160 8 chr17 9419394 9419513 -76018967 - L2 LINE L2 0 3272 3136 182 344 16 0 chr17 9419659 9419720 -76018760 - MER5A DNA MER1_type 0 189 128 438 269 0 37 chr17 9420355 9420463 -76018017 - L2 LINE L2 -7 3265 3162 1776 108 0 8 chr17 9421239 9421488 -76016992 - AluSx SINE Alu -16 296 50 1594 113 0 9 chr17 9421488 9421715 -76016765 - AluSc SINE Alu -82 227 1 506 294 43 16 chr17 9421782 9421969 -76016511 + MIR3 SINE MIR 15 206 -2 647 120 0 0 chr17 9422440 9422540 -76015940 - LTR12 LTR ERV1 0 714 615 296 261 11 0 chr17 9422542 9422634 -76015846 - LTR30 LTR ERV1 -79 643 551 263 182 91 15 chr17 9422645 9422711 -76015769 - LTR12 LTR ERV1 -439 275 205 1026 142 122 5 chr17 9422754 9422959 -76015521 - LTR12 LTR ERV1 -484 230 2 2087 135 0 3 chr17 9424470 9424782 -76013698 - AluSq SINE Alu -2 311 1 923 119 8 0 chr17 9424782 9424916 -76013564 - AluSq/x SINE Alu -178 135 1 432 156 104 0 chr17 9426081 9426177 -76012303 + MER53 DNA DNA 1 106 -83 342 305 156 32 chr17 9426953 9427107 -76011373 + L3 LINE CR1 1394 1566 -11 1939 57 4 38 chr17 9427179 9427441 -76011039 - AluY SINE Alu -21 290 38 2314 85 3 3 chr17 9428762 9429067 -76009413 - AluSx SINE Alu -7 305 1 186 279 49 90 chr17 9429963 9430085 -76008395 + MIR SINE MIR 31 147 -61 402 255 56 43 chr17 9430175 9430336 -76008144 + MIR SINE MIR 2 164 -98 2250 101 3 0 chr17 9430506 9430803 -76007677 + AluSq SINE Alu 1 298 -15 182 337 158 0 chr17 9430854 9430949 -76007531 + MIR3 SINE MIR 86 195 -13 340 278 16 16 chr17 9431625 9431751 -76006729 + L2 LINE L2 2996 3121 -192 447 241 35 47 chr17 9431888 9432058 -76006422 + L2 LINE L2 3146 3313 0 952 306 129 66 chr17 9432078 9432386 -76006094 + L2 LINE L2 1290 1577 -1737 2182 111 0 46 chr17 9432386 9432562 -76005918 - AluSx SINE Alu -3 309 153 1606 52 61 5 chr17 9432562 9432775 -76005705 - AluSg/x SINE Alu -17 293 69 2182 111 0 46 chr17 9432775 9432922 -76005558 - AluSx SINE Alu -159 153 1 952 306 129 66 chr17 9432922 9433847 -76004633 + L2 LINE L2 1577 2601 -713 238 376 11 34 chr17 9433867 9434045 -76004435 - L1MEd LINE L1 -5604 515 342 351 261 124 0 chr17 9434588 9434749 -76003731 - MER112 DNA MER1_type -12 248 68 619 141 27 13 chr17 9434752 9434901 -76003579 + (TGGA)n Simple_repeat Simple_repeat 3 153 0 206 398 11 0 chr17 9435026 9435119 -76003361 + L2 LINE L2 3204 3297 -16 2357 83 0 3 chr17 9436890 9437191 -76001289 - AluSx SINE Alu -12 300 1 532 332 58 40 chr17 9437349 9437677 -76000803 - L2 LINE L2 -4 3268 2935 2359 95 0 9 chr17 9438095 9438410 -76000070 - AluSx SINE Alu 0 312 1 206 281 0 31 chr17 9438848 9438912 -75999568 - MIR SINE MIR -124 84 23 522 245 82 27 chr17 9440079 9440226 -75998254 - MER5B DNA MER1_type -3 175 21 2275 96 3 3 chr17 9440499 9440802 -75997678 + AluSg SINE Alu 1 303 -7 2077 97 10 48 chr17 9440802 9441113 -75997367 + AluSc SINE Alu 1 299 -10 2116 125 3 0 chr17 9441810 9442107 -75996373 - AluSp SINE Alu -15 298 1 219 278 77 102 chr17 9442132 9442579 -75995901 - L2 LINE L2 -8 3264 2771 1340 119 4 44 chr17 9442674 9442901 -75995579 + AluY SINE Alu 87 304 -7 1321 148 0 5 chr17 9442909 9443118 -75995362 + AluSg/x SINE Alu 92 299 -13 216 0 0 0 chr17 9443243 9443267 -75995213 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 982 278 78 38 chr17 9443268 9443668 -75994812 - L2 LINE L2 -14 3299 2884 2343 48 7 7 chr17 9444129 9444424 -75994056 + AluY SINE Alu 1 295 -16 318 337 116 32 chr17 9444459 9444649 -75993831 + L3 LINE CR1 1037 1242 -335 1172 106 0 0 chr17 9444703 9444864 -75993616 + AluSq SINE Alu 152 312 -1 355 312 100 48 chr17 9444875 9445106 -75993374 + L3 LINE CR1 1333 1575 -2 231 36 0 0 chr17 9445123 9445151 -75993329 + (CCTG)n Simple_repeat Simple_repeat 3 30 0 231 152 0 0 chr17 9445153 9445199 -75993281 + CT-rich Low_complexity Low_complexity 4 49 0 2483 213 77 25 chr17 9445250 9445659 -75992821 - L1ME2 LINE L1 -117 6116 5730 1782 112 44 20 chr17 9445659 9445954 -75992526 + AluSx SINE Alu 1 302 -10 2483 213 77 25 chr17 9445954 9446400 -75992080 - L1ME2 LINE L1 -503 5730 5214 240 378 150 0 chr17 9446459 9446586 -75991894 + L3 LINE CR1 1038 1183 -394 2052 218 48 155 chr17 9446586 9446901 -75991579 - L1ME2 LINE L1 -992 5223 4876 225 0 0 0 chr17 9446901 9446926 -75991554 + (CA)n Simple_repeat Simple_repeat 2 26 0 2052 218 48 155 chr17 9446926 9447045 -75991435 - L1ME2 LINE L1 -1339 4876 4746 2150 71 3 11 chr17 9447045 9447364 -75991116 - AluY SINE Alu 0 317 1 2052 218 48 155 chr17 9447364 9448366 -75990114 - L1ME2 LINE L1 -1469 4746 3939 577 254 46 0 chr17 9448366 9448472 -75990008 - L1ME2 LINE L1 -3089 3126 3026 1637 191 32 61 chr17 9448472 9448848 -75989632 - MLT1A1 LTR MaLR 0 365 1 577 254 46 0 chr17 9448848 9448938 -75989542 - L1ME2 LINE L1 -3189 3026 2921 399 196 21 21 chr17 9448966 9449063 -75989417 - L1ME2 LINE L1 -3732 2483 2387 347 250 61 86 chr17 9449079 9449136 -75989344 - L1ME2 LINE L1 -4037 2359 2302 1283 7 7 13 chr17 9449136 9449289 -75989191 + L1PA6 LINE L1 6003 6154 0 347 250 61 86 chr17 9449289 9449511 -75988969 - L1ME2 LINE L1 -4094 2302 2087 246 32 0 0 chr17 9449522 9449553 -75988927 + (TG)n Simple_repeat Simple_repeat 2 32 0 198 0 0 0 chr17 9449721 9449743 -75988737 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 2087 86 0 0 chr17 9449752 9450021 -75988459 - AluSg SINE Alu -31 279 11 189 352 0 0 chr17 9450060 9450114 -75988366 - L2 LINE L2 -31 3241 3188 247 274 162 17 chr17 9450240 9450357 -75988123 + L2 LINE L2 2925 3058 -214 1115 162 56 20 chr17 9450491 9450688 -75987792 - Tigger3(Golem) DNA MER2_type -1 3028 2825 734 208 11 71 chr17 9451029 9451094 -75987386 - MIR SINE MIR 0 262 195 2249 92 0 0 chr17 9451094 9451389 -75987091 - AluSq SINE Alu -18 295 1 734 208 11 71 chr17 9451389 9451506 -75986974 - MIR SINE MIR -67 195 91 2284 100 0 0 chr17 9452296 9452607 -75985873 - AluSq SINE Alu -1 312 2 1001 279 118 0 chr17 9452783 9453181 -75985299 + LTR16A LTR ERVL 1 445 -5 195 42 0 0 chr17 9453559 9453583 -75984897 + (CA)n Simple_repeat Simple_repeat 1 24 0 2336 71 0 23 chr17 9454922 9455231 -75983249 - AluY SINE Alu -9 302 1 722 82 20 0 chr17 9455231 9455329 -75983151 - AluSg/x SINE Alu -8 302 203 2306 74 7 3 chr17 9455350 9455649 -75982831 - AluSg SINE Alu -10 300 1 2268 173 44 22 chr17 9455652 9456101 -75982379 + MER68 LTR ERV1 34 492 -70 473 255 0 0 chr17 9456101 9456195 -75982285 + MER82 DNA MER2_type 1 94 -559 366 338 32 6 chr17 9456233 9456390 -75982090 - MIR SINE MIR -73 189 29 690 287 12 0 chr17 9456415 9456582 -75981898 + MER82 DNA MER2_type 447 615 -38 470 154 0 26 chr17 9456568 9456646 -75981834 + MER68 LTR ERV1 480 555 -7 * 1964 86 93 7 chr17 9457236 9457516 -75980964 - AluSq SINE Alu -9 304 1 1967 142 15 9 chr17 9457591 9457929 -75980551 + MER2 DNA MER2_type 2 341 -3 1002 200 45 155 chr17 9457933 9458313 -75980167 + MER21B LTR ERV1 15 352 -511 642 234 78 73 chr17 9458362 9458567 -75979913 + MER21B LTR ERV1 364 569 -294 1132 89 0 0 chr17 9458571 9458717 -75979763 - AluSg/x SINE Alu -13 299 154 647 240 58 23 chr17 9458717 9458888 -75979592 - MER21B LTR ERV1 -126 737 561 2177 101 0 3 chr17 9458888 9459194 -75979286 + AluSg SINE Alu 1 305 -5 2116 108 0 0 chr17 9460096 9460392 -75978088 + AluSg SINE Alu 1 296 -14 529 319 37 61 chr17 9460447 9460516 -75977964 + HAL1 LINE L1 811 880 -1627 1893 140 45 72 chr17 9460516 9460639 -75977841 - MLT1B LTR MaLR 0 390 265 2332 100 0 0 chr17 9460639 9460950 -75977530 - AluSx SINE Alu -1 311 1 1893 140 45 72 chr17 9460950 9461045 -75977435 - MLT1B LTR MaLR -125 265 169 1724 168 0 39 chr17 9461045 9461355 -75977125 - AluJb SINE Alu -14 298 1 1893 140 45 72 chr17 9461355 9461536 -75976944 - MLT1B LTR MaLR -221 169 1 529 319 37 61 chr17 9461536 9461792 -75976688 + HAL1 LINE L1 880 1128 -1379 356 302 86 40 chr17 9462097 9462319 -75976161 - L1MEd LINE L1 -5779 340 109 2266 87 0 0 chr17 9462334 9462632 -75975848 - AluSx SINE Alu -14 298 1 463 311 64 43 chr17 9463043 9463323 -75975157 + L2 LINE L2 3027 3312 -1 421 165 59 24 chr17 9463414 9463448 -75975032 + (TA)n Simple_repeat Simple_repeat 2 33 -144 1955 100 0 0 chr17 9463448 9463708 -75974772 + AluSx SINE Alu 1 260 -52 421 165 59 24 chr17 9463708 9463843 -75974637 + (TA)n Simple_repeat Simple_repeat 33 177 0 519 332 47 64 chr17 9464018 9464485 -75973995 + L2 LINE L2 2813 3271 -1 2085 92 3 3 chr17 9465071 9465380 -75973100 - AluY SINE Alu 0 309 1 2264 146 6 0 chr17 9465848 9466183 -75972297 + MER1B DNA MER1_type 1 337 0 905 190 0 0 chr17 9466223 9466381 -75972099 + FAM SINE Alu 1 158 -17 225 214 12 71 chr17 9466404 9466488 -75971992 + MER113 DNA MER1_type? 1 79 -442 2123 102 0 0 chr17 9466844 9467139 -75971341 + AluSp SINE Alu 16 310 -3 1773 214 70 37 chr17 9467253 9467739 -75970741 - MLT1D LTR MaLR -2 503 2 387 298 171 10 chr17 9468344 9468549 -75969931 - L2 LINE L2 0 3313 3076 2045 111 0 36 chr17 9468731 9469037 -75969443 + AluSx SINE Alu 1 295 -17 685 236 0 0 chr17 9469205 9469332 -75969148 + FLAM_A SINE Alu 1 127 -15 215 325 95 8 chr17 9469334 9469460 -75969020 - L2 LINE L2 -594 2720 2584 2173 102 3 0 chr17 9520071 9520365 -75918115 - AluSq SINE Alu -18 295 1 487 171 0 34 chr17 9520951 9521126 -75917354 + G-rich Low_complexity Low_complexity 1 169 0 432 300 38 33 chr17 9521307 9521517 -75916963 - MLT1K LTR MaLR -121 467 257 320 263 118 33 chr17 9521561 9521713 -75916767 - MLT1K LTR MaLR -411 177 13 278 326 50 35 chr17 9521803 9521944 -75916536 - MIR SINE MIR -65 197 55 802 306 60 16 chr17 9522368 9522751 -75915729 + LTR16C LTR ERVL 90 489 -2 1771 87 76 11 chr17 9523608 9523900 -75914580 + AluSg SINE Alu 1 309 0 2043 102 16 13 chr17 9524061 9524364 -75914116 + AluSx SINE Alu 1 304 -8 2263 86 7 0 chr17 9525047 9525350 -75913130 + AluSx SINE Alu 1 305 -7 1263 100 0 0 chr17 9525355 9525525 -75912955 + AluSg/x SINE Alu 121 290 -20 183 245 82 0 chr17 9526314 9526363 -75912117 + MIR SINE MIR 32 84 -124 214 300 20 0 chr17 9526375 9526425 -75912055 + MIR SINE MIR 3 53 -209 1964 87 20 17 chr17 9526578 9526876 -75911604 + AluSg SINE Alu 1 299 -11 678 258 146 0 chr17 9527019 9527232 -75911248 + MIR SINE MIR 19 262 0 188 176 27 162 chr17 9527252 9527289 -75911191 + MIR3 SINE MIR 124 148 -60 365 263 26 105 chr17 9527289 9527479 -75911001 + MER5B DNA MER1_type 1 175 -3 188 176 27 162 chr17 9527479 9527515 -75910965 + MIR3 SINE MIR 148 187 -21 3054 170 40 16 chr17 9527616 9528198 -75910282 - L1MB5 LINE L1 -6 6168 5573 566 165 19 10 chr17 9529232 9529335 -75909145 + MIR SINE MIR 1 104 -158 2011 115 0 7 chr17 9529713 9530020 -75908460 - AluSx SINE Alu 0 305 1 847 271 24 5 chr17 9530500 9530710 -75907770 - MIR SINE MIR -21 241 28 223 299 47 9 chr17 9530747 9530854 -75907626 + L3 LINE CR1 1143 1253 -324 333 306 69 28 chr17 9531141 9531285 -75907195 - L1ME3 LINE L1 -22 6140 5991 2083 73 62 3 chr17 9531698 9531987 -75906493 - AluSc SINE Alu -3 306 1 216 0 0 0 chr17 9532547 9532571 -75905909 + (TGAA)n Simple_repeat Simple_repeat 4 27 0 1732 149 0 11 chr17 9532571 9532852 -75905628 - AluJo SINE Alu -34 278 1 1272 38 0 6 chr17 9532864 9533022 -75905458 - AluY SINE Alu -4 307 151 1645 113 4 4 chr17 9533831 9534069 -75904411 - AluSq SINE Alu -41 272 35 912 155 16 36 chr17 9534145 9534338 -75904142 + MER53 DNA DNA 1 189 0 2218 105 3 0 chr17 9534857 9535161 -75903319 - AluSq SINE Alu -8 305 1 260 297 55 0 chr17 9535321 9535412 -75903068 + L1ME4a LINE L1 5596 5691 -430 243 252 0 54 chr17 9535551 9535662 -75902818 + L1ME4a LINE L1 5946 6050 -71 2044 114 7 0 chr17 9535806 9536113 -75902367 + AluY SINE Alu 1 309 -2 726 173 47 0 chr17 9536235 9536362 -75902118 - FLAM_C SINE Alu 0 133 1 291 253 114 0 chr17 9536637 9536716 -75901764 - L1P LINE L1 -1979 4167 4080 621 178 48 7 chr17 9537039 9537185 -75901295 + AluSg/x SINE Alu 70 221 -91 515 204 0 0 chr17 9537806 9537894 -75900586 + L2 LINE L2 3225 3312 -1 2193 113 37 53 chr17 9539306 9539346 -75899134 - THE1C LTR MaLR -1 374 335 2007 127 23 0 chr17 9539346 9539645 -75898835 + AluSx SINE Alu 1 306 -6 2193 113 37 53 chr17 9539645 9539984 -75898496 - THE1C LTR MaLR -40 335 1 304 299 21 21 chr17 9540529 9540626 -75897854 - MIR SINE MIR -147 115 19 234 231 39 13 chr17 9540694 9540772 -75897708 + L1ME4a LINE L1 5969 6048 -73 719 247 88 24 chr17 9540792 9541166 -75897314 - MLT1K LTR MaLR -4 584 149 262 225 132 70 chr17 9541458 9541587 -75896893 - MIR SINE MIR -105 157 21 397 197 0 0 chr17 9541855 9541921 -75896559 - MIR SINE MIR -149 113 48 541 187 57 167 chr17 9541938 9542184 -75896296 - MER20 DNA MER1_type 0 219 1 2163 107 0 0 chr17 9542279 9542570 -75895910 - AluSg SINE Alu -19 291 1 394 311 185 8 chr17 9542601 9542861 -75895619 + L2 LINE L2 2617 2922 -392 1856 140 7 10 chr17 9543466 9543773 -75894707 - AluJo SINE Alu 0 312 7 225 325 8 17 chr17 9544001 9544121 -75894359 - LTR67 LTR ERVL -11 546 428 196 304 72 14 chr17 9544873 9544942 -75893538 - MIR SINE MIR 0 262 190 2206 111 0 0 chr17 9544942 9545239 -75893241 - AluSx SINE Alu -15 297 1 437 237 9 26 chr17 9545243 9545357 -75893123 - MIR SINE MIR -54 208 97 2190 110 0 0 chr17 9545419 9545719 -75892761 - AluSx SINE Alu -12 300 1 2079 104 0 3 chr17 9545729 9546046 -75892434 - AluSq SINE Alu 0 316 1 283 232 71 18 chr17 9546263 9546375 -75892105 - L1MC4 LINE L1 -1 8041 7924 450 220 68 8 chr17 9546605 9546723 -75891757 + MER106A DNA MER1_type 112 236 0 2439 60 0 0 chr17 9546758 9547058 -75891422 - AluY SINE Alu -11 300 1 1699 227 42 34 chr17 9547330 9547397 -75891083 + MLT1D LTR MaLR 1 66 -439 2476 124 13 5 chr17 9547397 9547769 -75890711 - THE1C LTR MaLR 0 375 1 1699 227 42 34 chr17 9547769 9548195 -75890285 + MLT1D LTR MaLR 66 498 -7 1123 120 12 132 chr17 9549285 9549543 -75888937 + AluJb SINE Alu 86 312 0 270 193 0 0 chr17 9549886 9549943 -75888537 + (TG)n Simple_repeat Simple_repeat 2 58 0 181 133 67 0 chr17 9550059 9550089 -75888391 - MIR SINE MIR -176 86 55 2084 102 0 33 chr17 9550961 9551265 -75887215 - AluSg SINE Alu -16 294 1 645 299 101 50 chr17 9551597 9552161 -75886319 - L2 LINE L2 -2 3311 2677 2207 107 0 0 chr17 9552161 9552460 -75886020 - AluSx SINE Alu -13 299 1 645 299 101 50 chr17 9552460 9552633 -75885847 - L2 LINE L2 -636 2677 2514 237 266 18 101 chr17 9552772 9552881 -75885599 - L2 LINE L2 -170 3102 3003 189 0 0 0 chr17 9553401 9553422 -75885058 + (TG)n Simple_repeat Simple_repeat 1 21 0 2140 108 3 9 chr17 9554103 9554418 -75884062 - AluSq SINE Alu 0 313 1 16150 18 0 0 chr17 9555135 9557731 -75880749 + L1HS LINE L1 3544 6139 -16 183 42 0 0 chr17 9557731 9557755 -75880725 + (TAAA)n Simple_repeat Simple_repeat 3 26 0 1220 189 59 42 chr17 9557995 9558302 -75880178 + AluJo SINE Alu 1 312 0 277 242 15 0 chr17 9558348 9558414 -75880066 - HAL1 LINE L1 -854 1653 1587 643 227 138 32 chr17 9558418 9558665 -75879815 - L1ME3A LINE L1 -1 6169 5897 1439 240 60 0 chr17 9558705 9559185 -75879295 - L1ME LINE L1 -3523 2557 2049 281 261 63 59 chr17 9559158 9559396 -75879084 - L1ME LINE L1 -4308 1772 1534 * 282 29 0 0 chr17 9559396 9559431 -75879049 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 847 204 6 0 chr17 9559431 9559588 -75878892 - FAM SINE Alu -26 159 2 1073 265 106 55 chr17 9559629 9560742 -75877738 - L1ME LINE L1 -4689 1393 321 251 350 12 25 chr17 9560985 9561145 -75877335 - L1ME LINE L1 -5625 445 288 240 331 36 55 chr17 9561185 9561547 -75876933 - L1ME LINE L1 -5665 405 51 2088 125 0 0 chr17 9561964 9562259 -75876221 - AluSq SINE Alu -18 295 1 21 57 0 0 chr17 9562379 9562414 -75876066 + AT_rich Low_complexity Low_complexity 1 35 0 1976 108 21 4 chr17 9562957 9563269 -75875211 + AluSx SINE Alu 1 317 0 356 212 35 0 chr17 9563347 9563432 -75875048 + L1MA10 LINE L1 6234 6321 -13 195 42 0 0 chr17 9563436 9563460 -75875020 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 1534 157 3 45 chr17 9563477 9563763 -75874717 - AluJo SINE Alu -38 274 1 2219 91 3 0 chr17 9564008 9564304 -75874176 - AluSg SINE Alu -13 297 1 422 48 24 48 chr17 9565189 9565273 -75873207 + (TTTC)n Simple_repeat Simple_repeat 3 84 0 1914 94 0 123 chr17 9565275 9565617 -75872863 - AluSq SINE Alu -3 300 1 1932 90 0 125 chr17 9566025 9566454 -75872026 + AluSq SINE Alu 1 386 0 2228 91 3 0 chr17 9567339 9567636 -75870844 + AluSg SINE Alu 1 298 -12 1579 157 0 45 chr17 9567882 9568169 -75870311 + AluJo SINE Alu 1 274 -38 195 42 0 0 chr17 9568186 9568210 -75870270 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 356 212 35 0 chr17 9568214 9568299 -75870181 - L1MA10 LINE L1 -13 6321 6234 1685 134 21 18 chr17 9568377 9568693 -75869787 - AluSx SINE Alu 0 317 1 1446 161 3 77 chr17 9568698 9569008 -75869472 - AluJo SINE Alu -12 300 14 806 244 104 37 chr17 9569027 9569355 -75869125 - L2 LINE L2 -569 2745 2396 1977 122 3 7 chr17 9569837 9570124 -75868356 - AluSx SINE Alu -26 286 1 2157 66 0 26 chr17 9570295 9570597 -75867883 - AluY SINE Alu -13 298 5 272 222 79 0 chr17 9570913 9570976 -75867504 + MER20B DNA MER1_type 516 583 -200 543 94 0 28 chr17 9570984 9571223 -75867257 + AluSx SINE Alu 1 292 -18 1191 119 0 0 chr17 9571223 9571391 -75867089 + AluSg/x SINE Alu 121 288 -24 644 213 52 6 chr17 9571411 9571585 -75866895 + MER20B DNA MER1_type 602 783 0 2146 91 0 3 chr17 9572512 9572882 -75865598 + AluSq SINE Alu 1 369 0 2249 85 0 0 chr17 9573387 9573692 -75864788 + AluSg SINE Alu 2 306 -4 400 253 63 11 chr17 9573769 9573864 -75864616 - MER5A DNA MER1_type -83 106 7 1793 108 0 4 chr17 9574248 9574497 -75863983 - AluSx SINE Alu -64 248 1 533 309 64 16 chr17 9575381 9575630 -75862850 + MIR SINE MIR 2 262 0 2059 124 0 3 chr17 9575769 9576067 -75862413 + AluSx SINE Alu 1 297 -15 318 296 77 61 chr17 9576250 9576547 -75861933 - L2 LINE L2 -130 3183 2882 3190 81 17 52 chr17 9576853 9577255 -75861225 - L1PA11 LINE L1 0 6174 5790 1779 155 0 32 chr17 9577255 9577565 -75860915 - AluSx SINE Alu -12 300 1 3190 81 17 52 chr17 9577565 9577644 -75860836 - L1PA11 LINE L1 -384 5790 5710 2014 104 14 0 chr17 9578963 9579271 -75859209 + AluSx SINE Alu 1 312 0 627 222 120 19 chr17 9579309 9579525 -75858955 + L1ME4a LINE L1 5882 6119 -2 404 281 67 15 chr17 9580239 9580374 -75858106 + MIR SINE MIR 87 228 -34 1979 65 59 52 chr17 9580720 9581026 -75857454 - AluSq SINE Alu -5 308 1 25 0 0 0 chr17 9582295 9582320 -75856160 + GC_rich Low_complexity Low_complexity 1 25 0 333 286 157 19 chr17 9583114 9583378 -75855102 - L2 LINE L2 -212 3060 2763 336 102 0 0 chr17 9583683 9583732 -75854748 + (A)n Simple_repeat Simple_repeat 1 49 0 640 182 297 21 chr17 9584006 9584198 -75854282 + MIR SINE MIR 2 246 -16 2368 49 0 52 chr17 9584344 9584671 -75853809 + AluY SINE Alu 1 310 -1 336 252 104 109 chr17 9584943 9585336 -75853144 - L2 LINE L2 -3 3310 2920 603 201 0 0 chr17 9585457 9585591 -75852889 + CT-rich Low_complexity Low_complexity 2 135 0 682 229 0 0 chr17 9585602 9585733 -75852747 - AluJo/FRAM SINE Alu -3 309 179 1557 101 0 0 chr17 9585734 9585943 -75852537 + AluSg/x SINE Alu 90 298 -14 1440 181 4 11 chr17 9585985 9586262 -75852218 - L1PA16 LINE L1 0 6166 5892 365 279 85 23 chr17 9586264 9586393 -75852087 - L1ME4a LINE L1 -4 6117 5981 300 258 141 31 chr17 9586421 9586584 -75851896 - L1ME4a LINE L1 -222 5899 5719 292 253 192 0 chr17 9586640 9586739 -75851741 + L1P LINE L1 4050 4167 -1979 * 318 265 61 30 chr17 9586738 9586870 -75851610 - L1ME4a LINE L1 -384 5737 5602 373 300 1 3 chr17 9586889 9587002 -75851478 - L1ME2 LINE L1 -2 6332 6059 1538 129 53 4 chr17 9587045 9587308 -75851172 - AluSx SINE Alu -36 276 1 538 170 86 0 chr17 9587309 9587424 -75851056 - L1MA8 LINE L1 -118 6173 6050 1242 144 36 0 chr17 9587464 9587658 -75850822 - L1PB1 LINE L1 -7 6144 5944 308 280 11 11 chr17 9587695 9587788 -75850692 - L1ME4a LINE L1 -693 5428 5336 2216 101 0 13 chr17 9587793 9588109 -75850371 - AluSx SINE Alu 0 312 1 503 308 64 20 chr17 9588992 9589242 -75849238 + MIR SINE MIR 2 262 0 2044 128 0 3 chr17 9589381 9589679 -75848801 + AluSx SINE Alu 1 297 -15 324 297 78 57 chr17 9589862 9590158 -75848322 - L2 LINE L2 -130 3183 2882 284 186 16 85 chr17 9590538 9590560 -75847920 + G-rich Low_complexity Low_complexity 6 28 -152 191 61 30 0 chr17 9590560 9590593 -75847887 + (TGGG)n Simple_repeat Simple_repeat 2 35 0 284 186 16 85 chr17 9590593 9590758 -75847722 + G-rich Low_complexity Low_complexity 28 180 0 * 291 228 30 42 chr17 9590621 9590788 -75847692 + (GGGTG)n Simple_repeat Simple_repeat 2 166 0 201 74 0 0 chr17 9591017 9591044 -75847436 + (GGGAA)n Simple_repeat Simple_repeat 2 28 0 380 336 91 16 chr17 9591044 9591473 -75847007 + HAL1 LINE L1 1153 1613 -894 316 291 77 50 chr17 9592014 9592234 -75846246 + L1MEc LINE L1 2161 2386 -4010 314 324 32 46 chr17 9592291 9592513 -75845967 + L1MEc LINE L1 2384 2599 -3616 1945 95 16 54 chr17 9592513 9592828 -75845652 + AluSq SINE Alu 1 303 -10 314 324 32 46 chr17 9592828 9593040 -75845440 + L1MEc LINE L1 2599 2812 -3403 288 86 0 0 chr17 9593054 9593089 -75845391 + tRNA-Trp tRNA tRNA 1 35 -40 357 276 98 0 chr17 9593181 9593304 -75845176 + L1MEc LINE L1 2943 3077 -3138 426 243 86 21 chr17 9593307 9593447 -75845033 + MER69 DNA AcHobo 1 149 -1077 401 255 23 42 chr17 9593623 9593762 -75844718 - MER20B DNA MER1_type -21 198 58 2236 88 3 0 chr17 9593762 9594057 -75844423 + AluSp SINE Alu 1 296 -17 1879 134 15 0 chr17 9594198 9594467 -75844013 - AluSx SINE Alu 0 312 40 2068 146 0 0 chr17 9594470 9594764 -75843716 - AluSx SINE Alu -17 295 2 1122 128 0 0 chr17 9595412 9595568 -75842912 - AluSp SINE Alu -21 292 137 2448 87 3 0 chr17 9595684 9595983 -75842497 - AluSp SINE Alu -5 308 9 2501 167 120 38 chr17 9596241 9596454 -75842026 - MER6A DNA MER2_type -261 604 410 2467 68 0 3 chr17 9596454 9596748 -75841732 + AluSc SINE Alu 1 293 -16 2501 167 120 38 chr17 9596748 9597092 -75841388 - MER6A DNA MER2_type -455 410 1 288 0 0 0 chr17 9597157 9597189 -75841291 + (CA)n Simple_repeat Simple_repeat 2 33 0 486 264 8 0 chr17 9597189 9597314 -75841166 + L1ME LINE L1 5617 5742 -428 2233 87 0 71 chr17 9597372 9597694 -75840786 - AluSg SINE Alu -11 299 1 216 0 0 0 chr17 9598255 9598279 -75840201 + (TGAA)n Simple_repeat Simple_repeat 4 27 0 1846 149 0 11 chr17 9598279 9598560 -75839920 - AluJo SINE Alu -34 278 1 1342 38 0 6 chr17 9598572 9598730 -75839750 - AluY SINE Alu -4 307 151 973 145 11 32 chr17 9599604 9599790 -75838690 - MER5A DNA MER1_type -6 183 2 401 46 81 46 chr17 9600041 9600214 -75838266 + (TA)n Simple_repeat Simple_repeat 2 180 0 464 75 69 29 chr17 9600229 9600402 -75838078 + (TA)n Simple_repeat Simple_repeat 1 180 0 2343 77 0 74 chr17 9600553 9600890 -75837590 - AluSx SINE Alu 0 312 1 2183 104 0 0 chr17 9601398 9601687 -75836793 + AluSq SINE Alu 18 306 -7 338 274 18 26 chr17 9601721 9601834 -75836646 + L2 LINE L2 3200 3311 -2 1365 208 46 14 chr17 9603368 9603715 -75834765 - MLT1A1 LTR MaLR -7 358 1 2024 90 4 22 chr17 9603949 9604216 -75834264 - AluSg SINE Alu -10 300 39 262 109 0 22 chr17 9604438 9604484 -75833996 + MADE1 DNA Mariner 2 46 -34 415 267 0 0 chr17 9604780 9604885 -75833595 + L2 LINE L2 3161 3265 -7 23 0 0 0 chr17 9606085 9606108 -75832372 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr17 9606529 9606559 -75831921 + AT_rich Low_complexity Low_complexity 1 30 0 195 42 0 0 chr17 9607097 9607121 -75831359 + (A)n Simple_repeat Simple_repeat 1 24 0 2266 100 7 3 chr17 9607217 9607518 -75830962 + AluSx SINE Alu 1 302 -10 2439 164 55 49 chr17 9608513 9608799 -75829681 - LTR22 LTR ERVK 0 509 217 1828 88 32 0 chr17 9608799 9609049 -75829431 + L1PA6 LINE L1 5891 6148 -6 2439 164 55 49 chr17 9609049 9609268 -75829212 - LTR22 LTR ERVK -292 217 1 4042 36 13 2 chr17 9609659 9610135 -75828345 + L1PA3 LINE L1 5672 6152 -3 1105 190 43 9 chr17 9610162 9610394 -75828086 - MIR SINE MIR -10 252 13 837 282 115 18 chr17 9610416 9610746 -75827734 - HERVL LTR ERVL -3035 2619 2258 2490 60 0 17 chr17 9610895 9611197 -75827283 - AluY SINE Alu -14 297 1 446 314 49 20 chr17 9611332 9611714 -75826766 - HERVL LTR ERVL -3544 2220 1763 2193 117 0 10 chr17 9611786 9612095 -75826385 + AluSp SINE Alu 1 306 -7 1821 139 3 24 chr17 9612338 9612652 -75825828 - AluJo SINE Alu 0 308 1 2193 127 0 0 chr17 9613040 9613347 -75825133 - AluSx SINE Alu -5 307 1 236 200 19 133 chr17 9613746 9613851 -75824629 - L1M4 LINE L1 -854 5292 5200 465 216 32 0 chr17 9613861 9613986 -75824494 - L1M4 LINE L1 -912 5234 5106 * 1272 250 71 47 chr17 9613966 9614364 -75824116 - L1M4 LINE L1 -2717 3429 3013 2243 101 19 7 chr17 9614364 9614543 -75823937 - AluSq SINE Alu -1 312 126 192 40 0 0 chr17 9614543 9614568 -75823912 + (TTG)n Simple_repeat Simple_repeat 3 27 0 2243 101 19 7 chr17 9614568 9614696 -75823784 - AluSq SINE Alu -187 126 1 1272 250 71 47 chr17 9614696 9614845 -75823635 - L1M4 LINE L1 -3133 3013 2869 2065 126 0 0 chr17 9615229 9615523 -75822957 - AluSx SINE Alu -18 294 1 194 350 41 10 chr17 9615648 9615745 -75822735 + MIR SINE MIR 47 146 -116 335 241 58 0 chr17 9615750 9615837 -75822643 - MER63 DNA MER1_type 0 1060 969 * 465 186 137 0 chr17 9615822 9615924 -75822556 - MER63 DNA MER1_type -93 743 2 305 303 87 16 chr17 9616001 9616186 -75822294 + MIR SINE MIR 9 206 -56 2331 84 0 7 chr17 9616271 9616568 -75821912 + AluSx SINE Alu 1 295 -17 409 280 63 0 chr17 9616729 9616872 -75821608 - MIR SINE MIR -6 256 105 369 130 0 0 chr17 9616889 9616943 -75821537 + MER116 DNA Mariner 27 80 0 2190 134 0 0 chr17 9617053 9617360 -75821120 - AluSq SINE Alu -6 307 1 1499 174 4 0 chr17 9617483 9617736 -75820744 + L1PA16 LINE L1 5791 6044 -122 472 206 11 0 chr17 9617823 9617915 -75820565 + L1PB4 LINE L1 6050 6142 -14 1864 137 4 11 chr17 9617960 9618237 -75820243 + AluSx SINE Alu 1 275 -37 2183 98 17 3 chr17 9618690 9618977 -75819503 - AluY SINE Alu -20 291 1 1716 181 0 26 chr17 9619167 9619471 -75819009 - AluJb SINE Alu -16 296 1 2418 79 3 0 chr17 9619882 9620174 -75818306 - AluSg SINE Alu -17 293 1 268 278 79 63 chr17 9620493 9620619 -75817861 + MIR SINE MIR 19 146 -62 345 314 208 0 chr17 9620656 9620863 -75817617 + MIR SINE MIR 13 262 0 1520 195 182 90 chr17 9621235 9621395 -75817085 - LTR41 LTR ERVL -6 767 623 1780 122 107 7 chr17 9621395 9621666 -75816814 + AluSq SINE Alu 1 298 -15 1520 195 182 90 chr17 9621666 9622152 -75816328 - LTR41 LTR ERVL -150 623 61 2269 105 0 16 chr17 9622166 9622481 -75815999 - AluSg SINE Alu 0 310 1 324 164 96 14 chr17 9622481 9622554 -75815926 - LTR41 LTR ERVL -694 79 1 23 0 0 0 chr17 9623218 9623241 -75815239 + AT_rich Low_complexity Low_complexity 1 23 0 2177 103 4 0 chr17 9623241 9623522 -75814958 - AluSx SINE Alu -27 285 4 2063 133 0 20 chr17 9624017 9624319 -75814161 + AluSx SINE Alu 1 296 -16 26 30 0 0 chr17 9625230 9625263 -75813217 + AT_rich Low_complexity Low_complexity 1 33 0 1815 117 8 11 chr17 9625630 9625896 -75812584 + AluSg SINE Alu 45 309 -1 25 0 0 0 chr17 9625991 9626016 -75812464 + AT_rich Low_complexity Low_complexity 1 25 0 227 283 139 53 chr17 9626108 9626217 -75812263 + L1ME3 LINE L1 5276 5374 -747 2548 63 3 0 chr17 9626217 9626517 -75811963 + AluSp SINE Alu 6 306 -7 227 283 139 53 chr17 9626517 9626860 -75811620 + L1ME3 LINE L1 5374 5794 -327 6470 103 32 15 chr17 9627406 9628408 -75810072 - L1MA5 LINE L1 -2 6298 5280 291 203 0 0 chr17 9628647 9628711 -75809769 + (TG)n Simple_repeat Simple_repeat 2 65 0 2514 55 0 10 chr17 9629708 9630018 -75808462 - AluY SINE Alu -4 307 1 2417 82 0 0 chr17 9630089 9630380 -75808100 - AluSc SINE Alu -18 291 1 1722 164 10 17 chr17 9630422 9630720 -75807760 - AluJb SINE Alu -16 296 1 1875 159 0 17 chr17 9631144 9631445 -75807035 - AluJo SINE Alu -16 296 1 378 179 193 14 chr17 9632148 9632288 -75806192 - L1MB4 LINE L1 -6 6174 6010 2215 109 7 0 chr17 9632335 9632629 -75805851 + AluSx SINE Alu 2 297 -15 1837 182 22 25 chr17 9632629 9632840 -75805640 - L1MB4 LINE L1 -152 6028 5817 2212 111 7 10 chr17 9632840 9633147 -75805333 - AluSp SINE Alu -7 306 1 1837 182 22 25 chr17 9633147 9633303 -75805177 - L1MB4 LINE L1 -363 5817 5662 2250 111 0 10 chr17 9633941 9634248 -75804232 - AluSx SINE Alu -8 304 1 256 280 32 40 chr17 9634261 9634386 -75804094 + MIR SINE MIR 37 160 -102 1046 138 23 0 chr17 9635250 9635424 -75803056 + L1ME4a LINE L1 5301 5478 -700 2215 102 3 10 chr17 9635424 9635717 -75802763 - AluSx SINE Alu -21 291 1 2116 92 34 7 chr17 9635727 9636022 -75802458 - AluSg SINE Alu -7 303 1 2512 63 0 3 chr17 9636356 9636657 -75801823 + AluY SINE Alu 1 300 -11 2266 108 3 0 chr17 9636881 9637176 -75801304 - AluSx SINE Alu -16 296 1 263 217 169 21 chr17 9637411 9637600 -75800880 + L1ME4a LINE L1 5840 6056 -65 1692 81 190 8 chr17 9637833 9638080 -75800400 + AluSg1 SINE Alu 1 292 -17 1344 246 43 33 chr17 9638182 9638573 -75799907 + L1ME3 LINE L1 5768 6162 0 237 119 0 0 chr17 9638959 9639001 -75799479 + (TTTA)n Simple_repeat Simple_repeat 1 42 0 26 30 0 0 chr17 9639001 9639034 -75799446 + AT_rich Low_complexity Low_complexity 1 33 0 589 151 27 16 chr17 9639034 9639517 -75798963 + (TA)n Simple_repeat Simple_repeat 1 488 0 304 224 20 51 chr17 9639517 9639615 -75798865 - L1MCa LINE L1 -4361 2065 1971 430 196 52 12 chr17 9639632 9639805 -75798675 + (TA)n Simple_repeat Simple_repeat 1 180 0 2042 104 0 0 chr17 9640669 9640939 -75797541 - AluSc SINE Alu -3 306 37 789 318 55 13 chr17 9642432 9642816 -75795664 - LTR16C LTR ERVL -2 489 90 212 340 50 35 chr17 9643241 9643382 -75795098 + MIR SINE MIR 55 197 -65 312 263 118 33 chr17 9643472 9643624 -75794856 + MLT1K LTR MaLR 13 177 -411 423 300 38 33 chr17 9643668 9643878 -75794602 + MLT1K LTR MaLR 257 467 -121 486 75 0 0 chr17 9644178 9644245 -75794235 + (TTCC)n Simple_repeat Simple_repeat 4 70 0 189 0 0 0 chr17 9644243 9644264 -75794216 + (TC)n Simple_repeat Simple_repeat 1 21 0 * 1054 127 13 0 chr17 9644264 9644414 -75794066 - AluSg/x SINE Alu -10 302 151 530 306 41 0 chr17 9644904 9644942 -75793538 - LTR33 LTR ERVL 0 521 486 1739 204 79 27 chr17 9644942 9645384 -75793096 - MLT1C LTR MaLR -2 465 1 530 306 41 0 chr17 9645384 9645541 -75792939 - LTR33 LTR ERVL -35 486 318 2107 93 10 0 chr17 9645883 9646185 -75792295 + AluSq SINE Alu 1 305 -8 196 111 0 0 chr17 9646509 9646536 -75791944 + MIR SINE MIR 118 144 -118 270 0 0 0 chr17 9646732 9646762 -75791718 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 2152 83 3 0 chr17 9647708 9647997 -75790483 + AluY SINE Alu 1 290 -21 2041 111 9 19 chr17 9648172 9648487 -75789993 - AluSx SINE Alu 0 312 1 1024 80 13 13 chr17 9648729 9648879 -75789601 - AluSg SINE Alu -160 150 1 326 164 96 14 chr17 9648879 9648952 -75789528 - LTR41 LTR ERVL -694 79 1 372 253 22 101 chr17 9649558 9649736 -75788744 - L1ME4a LINE L1 -2 6119 5956 263 226 21 21 chr17 9650306 9650399 -75788081 - L1M4 LINE L1 -1701 4445 4353 1865 139 0 0 chr17 9650419 9650699 -75787781 - AluJb SINE Alu -32 280 1 318 326 156 28 chr17 9650797 9651079 -75787401 - L1M4 LINE L1 -1946 4200 3883 288 257 44 29 chr17 9651433 9651569 -75786911 - L1MEd LINE L1 -3896 2233 2096 813 222 51 34 chr17 9651763 9652056 -75786424 - L1M4 LINE L1 -1455 4691 4394 444 256 68 44 chr17 9652086 9652165 -75786315 - L1MEd LINE L1 -4938 1181 1105 2130 128 0 0 chr17 9652165 9652471 -75786009 + AluSx SINE Alu 1 306 -6 444 256 68 44 chr17 9652471 9652684 -75785796 - L1MEd LINE L1 -5014 1105 882 436 317 105 62 chr17 9653248 9653554 -75784926 - MLT1K LTR MaLR -257 331 13 2130 105 0 0 chr17 9654962 9655257 -75783223 - AluSg SINE Alu -15 295 1 2052 102 0 3 chr17 9656259 9656552 -75781928 + AluY SINE Alu 1 292 -19 839 60 0 26 chr17 9656581 9656698 -75781782 + L1PA5 LINE L1 6041 6154 0 729 144 20 0 chr17 9657620 9657766 -75780714 + (TCTA)n Simple_repeat Simple_repeat 4 152 0 378 0 0 0 chr17 9658059 9658101 -75780379 + (CA)n Simple_repeat Simple_repeat 2 43 0 2233 151 15 33 chr17 9658397 9658794 -75779686 - MLT1B LTR MaLR 0 390 1 2153 107 0 7 chr17 9659222 9659530 -75778950 - AluSg SINE Alu -4 306 1 2027 106 16 13 chr17 9660213 9660516 -75777964 - AluSx SINE Alu -8 304 1 1808 91 72 11 chr17 9660677 9660970 -75777510 - AluSg SINE Alu 0 309 1 1881 109 49 0 chr17 9661234 9661518 -75776962 - AluSx SINE Alu -14 298 1 2142 62 0 4 chr17 9661852 9662125 -75776355 + AluY SINE Alu 1 272 -39 1916 91 11 0 chr17 9662418 9662683 -75775797 + L1PA8 LINE L1 5905 6172 0 601 232 9 14 chr17 9662690 9662901 -75775579 - L1MCa LINE L1 -3132 3294 3085 336 278 158 23 chr17 9662948 9663081 -75775399 - L1MCa LINE L1 -4483 1943 1793 1113 274 117 22 chr17 9663662 9663742 -75774738 - LTR16C LTR ERVL -4 487 416 1986 116 7 13 chr17 9663742 9664052 -75774428 + AluSx SINE Alu 1 308 -4 1113 274 117 22 chr17 9664052 9664416 -75774064 - LTR16C LTR ERVL -75 416 1 734 247 88 18 chr17 9664613 9664823 -75773657 + L1MC/D LINE L1 5509 5738 -2070 2327 75 0 3 chr17 9664823 9665117 -75773363 + AluY SINE Alu 1 293 -18 967 148 24 0 chr17 9665117 9665286 -75773194 - L1M4 LINE L1 -700 5478 5306 308 268 28 63 chr17 9666146 9666288 -75772192 - MIR SINE MIR -89 173 37 2159 115 0 6 chr17 9666301 9666613 -75771867 + AluSx SINE Alu 1 310 -2 716 233 186 36 chr17 9667160 9667342 -75771138 + MER5C DNA MER1_type 8 162 -162 2010 105 0 3 chr17 9667342 9667671 -75770809 - AluSx SINE Alu 0 328 1 716 233 186 36 chr17 9667671 9667762 -75770718 + MER5C DNA MER1_type 162 323 -1 1930 176 14 39 chr17 9668050 9668090 -75770390 - L1MB3 LINE L1 0 6183 6144 1967 113 0 7 chr17 9668090 9668372 -75770108 - AluSc SINE Alu -21 288 9 1930 176 14 39 chr17 9668372 9668747 -75769733 - L1MB3 LINE L1 -39 6144 5778 442 327 133 26 chr17 9668790 9668871 -75769609 + L2 LINE L2 2090 2161 -1153 1982 129 3 3 chr17 9668871 9669181 -75769299 - AluSx SINE Alu -2 310 1 442 327 133 26 chr17 9669181 9669445 -75769035 + L2 LINE L2 2161 2472 -842 213 319 0 0 chr17 9669462 9669534 -75768946 + L2 LINE L2 2737 2808 -506 2129 113 0 0 chr17 9669682 9670005 -75768475 + AluSx SINE Alu 1 312 0 5054 160 21 7 chr17 9670084 9671128 -75767352 - L1PA16 LINE L1 -13 6153 5100 860 227 16 77 chr17 9673267 9673514 -75764966 - MIR SINE MIR -23 239 8 379 282 86 59 chr17 9673564 9673819 -75764661 - L2 LINE L2 -2 3270 3009 1413 173 67 28 chr17 9674827 9675111 -75763369 + AluJo SINE Alu 1 295 -17 248 219 0 55 chr17 9676490 9676563 -75761917 - MIR SINE MIR -174 88 20 991 226 107 53 chr17 9676635 9677047 -75761433 - HAL1 LINE L1 -779 1728 1295 1954 114 0 44 chr17 9677050 9677365 -75761115 - AluSx SINE Alu -11 301 1 1218 264 67 96 chr17 9677843 9678221 -75760259 - L1MC4a LINE L1 -748 5398 5721 2279 92 3 13 chr17 9678221 9678536 -75759944 + AluSx SINE Alu 1 312 0 1218 264 67 96 chr17 9678536 9679349 -75759131 - L1MC4a LINE L1 -424 5722 4887 2314 84 0 3 chr17 9679380 9679691 -75758789 - AluSg SINE Alu 0 310 1 2452 47 0 3 chr17 9680113 9680411 -75758069 + AluY SINE Alu 1 297 -14 30 45 0 0 chr17 9680413 9680457 -75758023 + AT_rich Low_complexity Low_complexity 1 44 0 881 351 93 13 chr17 9680540 9681312 -75757168 - L2 LINE L2 0 3272 2439 593 231 77 122 chr17 9681322 9681369 -75757111 + MER58C DNA MER1_type 3 51 -2369 2228 98 0 3 chr17 9681369 9681675 -75756805 - AluSg SINE Alu -5 305 1 593 231 77 122 chr17 9681675 9681848 -75756632 + MER58C DNA MER1_type 51 213 -2 2071 102 0 0 chr17 9682182 9682495 -75755985 + AluSx SINE Alu 1 313 0 1984 77 0 22 chr17 9683249 9683521 -75754959 - AluSc SINE Alu -7 302 37 491 258 92 7 chr17 9683824 9684070 -75754410 + LTR40a LTR ERVL 123 358 -104 2253 92 0 6 chr17 9684164 9684479 -75754001 - AluSq SINE Alu 0 313 1 1083 248 91 98 chr17 9685229 9685534 -75752946 - L2 LINE L2 -248 3065 2760 270 0 0 0 chr17 9685534 9685564 -75752916 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 1083 248 91 98 chr17 9685564 9685596 -75752884 - L2 LINE L2 -553 2760 2729 1848 124 51 40 chr17 9685596 9685848 -75752632 - L1MA4 LINE L1 -11 6289 6030 2073 104 7 0 chr17 9685848 9686137 -75752343 - AluSx SINE Alu -21 291 1 1848 124 51 40 chr17 9686137 9686238 -75752242 - L1MA4 LINE L1 -270 6030 5932 1083 248 91 98 chr17 9686238 9686654 -75751826 - L2 LINE L2 -584 2729 2315 1982 126 11 0 chr17 9686656 9687025 -75751455 - Charlie3 DNA MER1_type -4 2706 1 891 291 96 14 chr17 9687054 9687149 -75751331 - L2 LINE L2 -1060 2254 2168 2372 70 0 10 chr17 9687149 9687451 -75751029 + AluSg SINE Alu 1 299 -11 891 291 96 14 chr17 9687451 9687784 -75750696 - L2 LINE L2 -1146 2168 1791 1614 177 29 0 chr17 9687944 9688221 -75750259 + AluJb SINE Alu 17 301 -11 839 164 3 0 chr17 9688242 9688878 -75749602 + (TG)n Simple_repeat Simple_repeat 1 638 0 23 54 0 0 chr17 9688970 9689007 -75749473 + AT_rich Low_complexity Low_complexity 1 37 0 314 195 130 0 chr17 9689099 9689176 -75749304 - L1ME3A LINE L1 -52 6118 6032 2050 84 3 71 chr17 9689604 9689927 -75748553 + AluSx SINE Alu 1 301 -11 192 309 29 0 chr17 9690312 9690380 -75748100 - MIR SINE MIR -42 220 151 431 279 53 21 chr17 9690563 9690753 -75747727 + MIR3 SINE MIR 8 203 -5 977 245 69 35 chr17 9691289 9691607 -75746873 - MLT1I LTR MaLR -1 408 80 556 210 156 27 chr17 9691984 9692170 -75746310 + MER63A DNA MER1_type 1 210 0 222 345 69 43 chr17 9692201 9692317 -75746163 + L2 LINE L2 3101 3219 -53 2232 139 43 114 chr17 9692580 9693097 -75745383 + LTR12 LTR ERV1 1 480 -234 198 182 0 0 chr17 9693904 9693937 -75744543 + MIR SINE MIR 73 105 -157 559 169 0 0 chr17 9694387 9694476 -75744004 - FLAM_A SINE Alu -49 93 5 392 303 103 9 chr17 9694984 9695161 -75743319 + MIR SINE MIR 47 249 -13 2711 167 53 46 chr17 9696004 9696530 -75741950 - LTR31 LTR ERV1 -15 604 75 2199 266 101 60 chr17 9696624 9698047 -75740433 - HAL1 LINE L1 -607 1900 420 291 267 44 0 chr17 9698267 9698357 -75740123 - HAL1 LINE L1 -2370 137 44 682 269 44 26 chr17 9698510 9698737 -75739743 + MIR SINE MIR 32 262 0 2362 96 3 0 chr17 9698988 9699290 -75739190 + AluSx SINE Alu 1 303 -9 739 281 25 34 chr17 9699351 9699586 -75738894 - MIR SINE MIR -29 233 1 21 0 0 0 chr17 9700521 9700542 -75737938 + AT_rich Low_complexity Low_complexity 1 21 0 2274 114 0 25 chr17 9700879 9701194 -75737286 + AluSx SINE Alu 5 311 -1 393 61 0 61 chr17 9701813 9701879 -75736601 - L1PA16 LINE L1 -2 6164 6103 2171 102 14 10 chr17 9701895 9702190 -75736290 + AluSq SINE Alu 2 297 -16 300 111 0 0 chr17 9702193 9702238 -75736242 + (GGAA)n Simple_repeat Simple_repeat 4 48 0 507 207 9 9 chr17 9702435 9702551 -75735929 - L1ME3A LINE L1 -9 6161 6046 224 267 150 0 chr17 9702678 9702738 -75735742 + L2 LINE L2 3232 3300 -13 183 42 0 0 chr17 9702778 9702802 -75735678 + (CA)n Simple_repeat Simple_repeat 2 25 0 742 270 98 14 chr17 9702839 9702977 -75735503 + MIR SINE MIR 3 167 -95 2411 105 0 0 chr17 9702977 9703281 -75735199 - AluSx SINE Alu -8 304 1 742 270 98 14 chr17 9703281 9703357 -75735123 + MIR SINE MIR 167 235 -27 316 87 0 0 chr17 9704536 9704582 -75733898 + AluSq/x SINE Alu 90 135 -167 2297 108 0 0 chr17 9704582 9704877 -75733603 + AluSx SINE Alu 1 295 -17 804 156 0 8 chr17 9705086 9705214 -75733266 + FLAM_C SINE Alu 1 127 -16 1821 57 0 25 chr17 9705214 9705488 -75732992 + L1PA8 LINE L1 5929 6172 0 1615 137 128 9 chr17 9705749 9706086 -75732394 - L1MB2 LINE L1 0 6171 5795 2258 93 0 7 chr17 9706103 9706393 -75732087 - AluSc SINE Alu -21 288 1 1619 167 10 61 chr17 9706690 9706838 -75731642 + AluJo SINE Alu 1 126 -186 1875 139 0 77 chr17 9706838 9707161 -75731319 + AluSx SINE Alu 1 298 -14 1619 167 10 61 chr17 9707161 9707324 -75731156 + AluJo SINE Alu 126 296 -16 296 294 55 60 chr17 9707608 9707809 -75730671 - MIR SINE MIR -31 231 32 2488 77 7 3 chr17 9708280 9708590 -75729890 + AluSq SINE Alu 1 311 -2 285 97 0 48 chr17 9708594 9708656 -75729824 + (GAAA)n Simple_repeat Simple_repeat 2 60 0 441 256 26 8 chr17 9709199 9709316 -75729164 + L2 LINE L2 1868 1986 -1328 2257 100 10 3 chr17 9709332 9709632 -75728848 + AluSc SINE Alu 1 302 -7 525 228 49 9 chr17 9709723 9709871 -75728609 + L1ME3A LINE L1 6001 6161 -3 672 168 0 0 chr17 9709943 9710068 -75728412 + (CA)n Simple_repeat Simple_repeat 1 125 0 262 209 4 0 chr17 9710347 9710405 -75728075 - MIR SINE MIR -59 149 90 276 321 0 0 chr17 9711473 9711554 -75726926 + Charlie8 DNA MER1_type 5 85 -2332 755 238 138 0 chr17 9711584 9711773 -75726707 + MIR SINE MIR 12 226 -36 348 298 71 0 chr17 9712188 9712356 -75726124 - MARNA DNA Mariner -78 508 329 326 316 88 0 chr17 9712863 9712977 -75725503 + L2 LINE L2 3147 3270 -2 452 330 109 0 chr17 9713043 9713264 -75725216 - L1M4 LINE L1 -3321 2825 2581 2309 97 0 0 chr17 9713884 9714172 -75724308 + AluSx SINE Alu 1 288 -24 27 0 0 0 chr17 9714172 9714199 -75724281 + AT_rich Low_complexity Low_complexity 1 27 0 252 291 19 19 chr17 9714270 9714373 -75724107 + HsTC2 DNA Tc2 1 103 -1795 1894 161 0 13 chr17 9714386 9714691 -75723789 + AluJb SINE Alu 8 308 -4 234 220 0 0 chr17 9714695 9714745 -75723735 + HsTC2 DNA Tc2 40 89 -1809 2383 95 0 0 chr17 9715145 9715439 -75723041 + AluSq SINE Alu 1 294 -19 361 324 0 9 chr17 9715560 9715671 -75722809 + MIR SINE MIR 32 141 -121 2414 59 0 14 chr17 9716023 9716350 -75722130 - AluSq SINE Alu 0 323 1 21 0 0 0 chr17 9717458 9717479 -75721001 + AT_rich Low_complexity Low_complexity 1 21 0 562 301 107 35 chr17 9717554 9717858 -75720622 - L1MC/D LINE L1 -764 5382 5147 2371 88 0 28 chr17 9717858 9717892 -75720588 - AluY SINE Alu -1 310 277 195 42 0 0 chr17 9717892 9717916 -75720564 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2371 88 0 28 chr17 9717916 9718200 -75720280 - AluY SINE Alu -34 277 1 562 301 107 35 chr17 9718200 9718377 -75720103 - L1MC/D LINE L1 -999 5147 4984 1785 129 98 0 chr17 9718451 9718707 -75719773 - AluSx SINE Alu -31 281 1 238 248 177 9 chr17 9718936 9719049 -75719431 - L1MC/D LINE L1 -1490 4656 4525 1147 212 81 90 chr17 9719634 9720091 -75718389 + LTR16A1 LTR ERVL 1 453 -4 206 200 0 60 chr17 9720096 9720146 -75718334 + MIR SINE MIR 159 205 -57 420 308 112 33 chr17 9720494 9720708 -75717772 + L3 LINE CR1 1344 1574 -3 229 279 143 68 chr17 9721225 9721490 -75716990 - MARNA DNA Mariner -42 544 260 632 205 39 32 chr17 9721552 9721708 -75716772 + MER103 DNA DNA 9 165 -1 326 169 0 17 chr17 9721849 9721908 -75716572 + L2 LINE L2 3254 3311 -2 367 350 51 6 chr17 9721919 9722096 -75716384 - MARNA DNA Mariner -343 243 59 1591 141 17 0 chr17 9723365 9723599 -75714881 + AluSg SINE Alu 55 292 -18 205 296 96 48 chr17 9723961 9724086 -75714394 + MIR3 SINE MIR 5 135 -73 2331 78 7 13 chr17 9724098 9724407 -75714073 - AluY SINE Alu -4 307 1 715 249 148 22 chr17 9724467 9724825 -75713655 + MER113 DNA MER1_type? 24 426 -95 355 175 12 9 chr17 9724864 9724946 -75713534 + L1PA16 LINE L1 6087 6166 0 210 296 148 28 chr17 9725479 9725587 -75712893 - L2 LINE L2 -20 3252 3132 1876 152 32 76 chr17 9726058 9726286 -75712194 - MLT1B LTR MaLR 0 390 186 2318 119 0 3 chr17 9726286 9726597 -75711883 - AluSx SINE Alu -2 310 1 1876 152 32 76 chr17 9726597 9726776 -75711704 - MLT1B LTR MaLR -204 186 1 454 194 104 22 chr17 9727099 9727233 -75711247 - MLT1J1 LTR MaLR -301 145 1 2031 143 4 0 chr17 9727933 9728233 -75710247 + AluSx SINE Alu 1 301 0 226 290 176 23 chr17 9728249 9728380 -75710100 + L2 LINE L2 3122 3272 0 2198 91 24 3 chr17 9728494 9728792 -75709688 + AluSx SINE Alu 2 305 -7 465 265 26 50 chr17 9729245 9729441 -75709039 - MIR SINE MIR -52 210 14 220 224 149 0 chr17 9729418 9729485 -75708995 + MIR3 SINE MIR 110 186 -22 * 398 255 0 149 chr17 9730109 9730297 -75708183 + MIR SINE MIR 29 188 -74 802 189 18 24 chr17 9731842 9732011 -75706469 + MER3 DNA MER1_type 23 190 -19 229 159 48 32 chr17 9732071 9732134 -75706346 + C-rich Low_complexity Low_complexity 6 69 0 2317 107 0 19 chr17 9732317 9732635 -75705845 + AluSx SINE Alu 1 312 0 1044 189 39 45 chr17 9732775 9732847 -75705633 - MLT1A1 LTR MaLR -81 284 213 1752 152 81 3 chr17 9732847 9733130 -75705350 - AluJo SINE Alu -7 305 1 1044 189 39 45 chr17 9733130 9733343 -75705137 - MLT1A1 LTR MaLR -152 213 1 335 180 0 0 chr17 9734055 9734116 -75704364 + MIR SINE MIR 95 155 -107 2322 84 7 3 chr17 9734165 9734461 -75704019 - AluSg SINE Alu -13 297 1 1782 92 0 17 chr17 9735334 9735572 -75702908 + AluSc SINE Alu 1 234 -75 268 164 18 36 chr17 9735573 9735628 -75702852 + MIR SINE MIR 90 143 -65 485 258 13 38 chr17 9735715 9735874 -75702606 + MER103 DNA DNA 3 157 -9 2319 156 48 24 chr17 9736021 9736439 -75702041 + MSTC LTR MaLR 1 428 0 831 156 0 0 chr17 9736586 9736765 -75701715 + (TG)n Simple_repeat Simple_repeat 1 179 0 902 151 6 0 chr17 9736803 9737170 -75701310 + (TG)n Simple_repeat Simple_repeat 1 369 0 2218 118 14 0 chr17 9737661 9737958 -75700522 - AluSx SINE Alu -11 301 1 247 347 82 12 chr17 9738133 9738303 -75700177 + L2 LINE L2 2902 3083 -189 2033 191 3 3 chr17 9738305 9738544 -75699936 - MSTA LTR MaLR 0 428 187 2088 93 3 74 chr17 9738544 9738885 -75699595 - AluSq SINE Alu 0 313 5 2033 191 3 3 chr17 9738885 9739016 -75699464 - MSTA LTR MaLR -240 188 58 252 193 0 53 chr17 9739291 9739348 -75699132 - MER5A DNA MER1_type -2 187 134 656 299 91 29 chr17 9739408 9739859 -75698621 + HAL1 LINE L1 2024 2502 -5 2016 108 73 3 chr17 9739860 9740146 -75698334 - AluSq SINE Alu -7 306 1 990 164 0 18 chr17 9740166 9740358 -75698122 + AluSp SINE Alu 129 317 0 267 333 29 39 chr17 9740359 9740461 -75698019 + MER5A DNA MER1_type 64 164 -25 1614 159 47 43 chr17 9740895 9741196 -75697284 - AluJb SINE Alu -10 302 1 1060 255 9 0 chr17 9741648 9741879 -75696601 - MIR SINE MIR -6 256 24 237 167 0 0 chr17 9741910 9741952 -75696528 - MIR SINE MIR -199 63 22 1919 125 11 4 chr17 9742543 9742855 -75695625 - AluSq SINE Alu 0 314 1 2399 132 55 38 chr17 9742866 9742916 -75695564 - L1MB3 LINE L1 -1 6182 6134 2307 107 3 0 chr17 9742916 9743215 -75695265 - AluSx SINE Alu -12 300 1 1828 83 0 9 chr17 9743224 9743454 -75695026 - AluSg/x SINE Alu -6 306 79 2399 132 55 38 chr17 9743454 9743863 -75694617 - L1MB3 LINE L1 -56 6127 5705 584 214 76 7 chr17 9745326 9745471 -75693009 + MIR SINE MIR 30 184 -78 496 296 104 19 chr17 9746532 9746839 -75691641 - L1ME4a LINE L1 -1 6120 5788 259 294 48 48 chr17 9746924 9747097 -75691383 - L1ME4a LINE L1 0 6121 5949 208 0 0 0 chr17 9747097 9747120 -75691360 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 2273 89 11 0 chr17 9747120 9747402 -75691078 - AluSx SINE Alu -1 307 1 259 294 48 48 chr17 9747402 9747479 -75691001 - L1ME4a LINE L1 -170 5951 5870 424 299 40 45 chr17 9747488 9747689 -75690791 - MIR SINE MIR 0 262 63 1924 131 10 3 chr17 9747914 9748212 -75690268 + AluSg SINE Alu 1 300 -10 372 301 8 6 chr17 9748746 9748864 -75689616 - MIR SINE MIR -50 212 96 32 0 0 0 chr17 9749539 9749571 -75688909 + AT_rich Low_complexity Low_complexity 1 32 0 402 282 106 57 chr17 9749577 9750105 -75688375 + L1ME4a LINE L1 5567 6120 -1 1705 230 4 4 chr17 9750822 9751273 -75687207 + MER119 DNA MER1_type 2 549 -34 202 334 74 42 chr17 9751571 9751882 -75686598 - L2 LINE L2 -46 3226 2906 261 264 46 81 chr17 9752262 9752349 -75686131 + L2 LINE L2 3169 3252 -20 1676 179 0 28 chr17 9752387 9752522 -75685958 + AluJb SINE Alu 3 140 -172 1868 122 38 0 chr17 9752522 9752810 -75685670 + AluSg SINE Alu 1 299 -11 1676 179 0 28 chr17 9752810 9752993 -75685487 + AluJb SINE Alu 140 312 0 2142 113 0 10 chr17 9753210 9753520 -75684960 + AluSc SINE Alu 1 307 -2 805 254 119 20 chr17 9754133 9754570 -75683910 - MLT1G LTR MaLR 0 590 3 1909 74 0 0 chr17 9755254 9755498 -75682982 - AluSc SINE Alu -8 301 58 2144 126 7 0 chr17 9755987 9756297 -75682183 + AluSx SINE Alu 1 312 0 2524 61 28 56 chr17 9756869 9757052 -75681428 - L1MA1 LINE L1 0 6302 6115 258 32 0 0 chr17 9757052 9757083 -75681397 + (TTA)n Simple_repeat Simple_repeat 3 33 0 2074 75 3 20 chr17 9757090 9757382 -75681098 - AluY SINE Alu -24 287 1 2524 61 28 56 chr17 9757382 9757585 -75680895 - L1MA1 LINE L1 -193 6109 5919 394 293 55 30 chr17 9758396 9758560 -75679920 + MIR3 SINE MIR 14 181 -27 711 64 0 0 chr17 9759111 9759205 -75679275 + AluY SINE Alu 152 245 -66 191 381 42 5 chr17 9759412 9759601 -75678879 - L2 LINE L2 -660 2654 2459 228 111 0 0 chr17 9759618 9759654 -75678826 + (TCC)n Simple_repeat Simple_repeat 2 37 0 2096 103 17 0 chr17 9760212 9760503 -75677977 - AluSg SINE Alu -14 296 1 1070 287 96 37 chr17 9760677 9761247 -75677233 - L2 LINE L2 0 3313 2659 2171 84 3 36 chr17 9761247 9761555 -75676925 - AluSx SINE Alu -14 298 1 1070 287 96 37 chr17 9761555 9761958 -75676522 - L2 LINE L2 -654 2659 2281 319 248 95 48 chr17 9762145 9762355 -75676125 - MIR SINE MIR -30 232 13 451 291 64 61 chr17 9763080 9763376 -75675104 + L2 LINE L2 2932 3228 -85 413 315 82 0 chr17 9763525 9763709 -75674771 + MIR SINE MIR 40 238 -24 206 230 0 115 chr17 9763723 9763810 -75674670 + L2 LINE L2 3195 3271 -1 222 324 65 28 chr17 9764044 9764152 -75674328 - L2 LINE L2 -13 3300 3189 181 321 19 0 chr17 9764487 9764540 -75673940 - L2 LINE L2 -576 2738 2685 249 33 0 0 chr17 9764892 9764922 -75673558 + (T)n Simple_repeat Simple_repeat 1 30 0 2389 87 0 0 chr17 9765029 9765341 -75673139 - AluSx SINE Alu 0 312 1 1288 135 50 0 chr17 9765414 9765614 -75672866 - AluJb SINE Alu -17 295 86 319 306 109 7 chr17 9765771 9765918 -75672562 + MIR SINE MIR 98 259 -3 330 26 0 0 chr17 9766086 9766125 -75672355 + (TG)n Simple_repeat Simple_repeat 2 40 0 1840 162 0 10 chr17 9766684 9766993 -75671487 + AluJo SINE Alu 1 306 -6 320 228 40 39 chr17 9766997 9767099 -75671381 + L1MC4 LINE L1 7836 8040 -2 1401 204 85 53 chr17 9767302 9767618 -75670862 + MER63B DNA MER1_type 5 338 -724 2236 73 10 3 chr17 9767618 9767918 -75670562 - AluSq SINE Alu -11 302 1 1401 204 85 53 chr17 9767918 9767999 -75670481 + MER63B DNA MER1_type 338 415 -21 665 193 0 0 chr17 9768223 9768337 -75670143 + FLAM_C SINE Alu 6 119 -24 217 220 0 40 chr17 9768697 9768747 -75669733 + L2 LINE L2 3259 3306 -7 * 549 222 56 24 chr17 9768726 9768852 -75669628 - MER5B DNA MER1_type -46 132 3 252 0 0 0 chr17 9769218 9769246 -75669234 + (TG)n Simple_repeat Simple_repeat 1 28 0 37 29 0 43 chr17 9769406 9769476 -75669004 + AT_rich Low_complexity Low_complexity 1 67 0 722 242 104 15 chr17 9769504 9769764 -75668716 - L1MC4 LINE L1 -1 8041 7759 974 220 77 65 chr17 9769842 9769954 -75668526 - L1MC4a LINE L1 -1973 5835 5726 2503 55 0 3 chr17 9769954 9770263 -75668217 - AluY SINE Alu -3 308 1 974 220 77 65 chr17 9770263 9770473 -75668007 - L1MC4a LINE L1 -2082 5726 5509 1155 270 117 22 chr17 9770670 9771034 -75667446 + LTR16C LTR ERVL 1 416 -75 2008 116 3 13 chr17 9771034 9771345 -75667135 - AluSx SINE Alu -4 308 1 1155 270 117 22 chr17 9771345 9771425 -75667055 + LTR16C LTR ERVL 416 487 -4 336 278 158 23 chr17 9772006 9772139 -75666341 + L1MCa LINE L1 1793 1943 -4483 1049 226 19 36 chr17 9772186 9772404 -75666076 + L1MCa LINE L1 3085 3294 -3132 3327 62 0 5 chr17 9772404 9772825 -75665655 - L1PA8 LINE L1 0 6172 5754 1049 226 19 36 chr17 9772825 9773021 -75665459 + L1MCa LINE L1 3294 3492 -2934 282 143 0 0 chr17 9773128 9773191 -75665289 + (CAT)n Simple_repeat Simple_repeat 3 65 0 1262 242 50 50 chr17 9773755 9774292 -75664188 + L1MCa LINE L1 3477 4013 -2413 1482 121 13 121 chr17 9774991 9775304 -75663176 - Tigger7 DNA MER2_type -1 2586 2308 753 177 0 125 chr17 9775307 9775499 -75662981 - Tigger7 DNA MER2_type -534 171 4 355 233 29 105 chr17 9775562 9775734 -75662746 - MIR3 SINE MIR -11 197 39 263 278 213 35 chr17 9775751 9775920 -75662560 - MIR SINE MIR -17 245 47 639 206 15 121 chr17 9775960 9776159 -75662321 - MIR SINE MIR -46 216 39 205 343 14 0 chr17 9776664 9776734 -75661746 - L2 LINE L2 -73 3199 3129 196 277 12 84 chr17 9776934 9777017 -75661463 - MIR SINE MIR -41 221 145 554 310 26 47 chr17 9777045 9777277 -75661203 + MIR SINE MIR 31 257 -5 2119 99 3 0 chr17 9777277 9777569 -75660911 - AluSc SINE Alu -16 293 1 339 106 0 0 chr17 9777576 9777623 -75660857 - MIR SINE MIR -106 156 110 2267 145 0 6 chr17 9778219 9778564 -75659916 - MER2 DNA MER2_type -1 343 1 2431 249 90 23 chr17 9778604 9779661 -75658819 - L1M4 LINE L1 -2232 3914 2787 2100 110 0 13 chr17 9779861 9779987 -75658493 + AluSc SINE Alu 1 127 -182 201 74 0 0 chr17 9779987 9780014 -75658466 + (TA)n Simple_repeat Simple_repeat 2 28 0 2100 110 0 13 chr17 9780014 9780197 -75658283 + AluSc SINE Alu 127 306 -3 1512 189 73 25 chr17 9780725 9781079 -75657401 - MLT1A2 LTR MaLR 0 374 4 339 368 38 27 chr17 9781194 9781379 -75657101 + MIR3 SINE MIR 20 206 -2 378 270 50 115 chr17 9781795 9782050 -75656430 + L1MC4 LINE L1 5673 5819 -302 584 284 66 30 chr17 9783615 9783812 -75654668 - MIR SINE MIR -10 252 49 506 235 9 0 chr17 9784410 9784525 -75653955 - MER5B DNA MER1_type 0 178 63 629 221 153 18 chr17 9784549 9784712 -75653768 + MER5A DNA MER1_type 4 188 -1 328 144 114 111 chr17 9784727 9784823 -75653657 + MER5A DNA MER1_type 6 141 -48 1944 138 0 0 chr17 9784823 9785172 -75653308 - AluSx SINE Alu 0 312 1 328 144 114 111 chr17 9785172 9785222 -75653258 + MER5A DNA MER1_type 141 189 0 508 358 49 23 chr17 9785416 9785664 -75652816 + L2 LINE L2 2354 2619 -695 198 0 0 0 chr17 9785664 9785686 -75652794 + (TG)n Simple_repeat Simple_repeat 1 22 0 508 358 49 23 chr17 9785686 9785864 -75652616 + L2 LINE L2 2619 2791 -523 196 281 67 59 chr17 9786145 9786280 -75652200 + L3b LINE CR1 1277 1412 -171 437 216 128 8 chr17 9786493 9786618 -75651862 + MIR3 SINE MIR 20 159 -49 1186 160 9 61 chr17 9786619 9786850 -75651630 + MER20 DNA MER1_type 1 219 0 291 188 75 38 chr17 9786860 9786940 -75651540 + MER5B DNA MER1_type 17 99 -79 362 210 240 30 chr17 9787218 9787301 -75651179 + MLT1J2 LTR MaLR 274 383 -67 213 39 0 0 chr17 9787301 9787327 -75651153 + (TAAAA)n Simple_repeat Simple_repeat 4 29 0 362 210 240 30 chr17 9787327 9787343 -75651137 + MLT1J2 LTR MaLR 383 394 -56 248 374 0 0 chr17 9789072 9789163 -75649317 - L3b LINE CR1 -248 1335 1245 478 313 25 69 chr17 9789402 9789836 -75648644 + L2 LINE L2 2487 2901 -413 1578 215 67 29 chr17 9789849 9790078 -75648402 - MLT1F1 LTR MaLR -125 442 188 213 39 0 0 chr17 9790078 9790104 -75648376 + (GA)n Simple_repeat Simple_repeat 2 27 0 1578 215 67 29 chr17 9790104 9790292 -75648188 - MLT1F1 LTR MaLR -379 188 9 499 317 30 25 chr17 9790502 9790701 -75647779 + MIR SINE MIR 48 247 -15 264 59 0 0 chr17 9790723 9790757 -75647723 + (TAA)n Simple_repeat Simple_repeat 1 34 0 1618 141 87 0 chr17 9791434 9791710 -75646770 + AluJb SINE Alu 1 300 -12 2364 90 6 0 chr17 9792062 9792373 -75646107 - AluSq SINE Alu 0 313 1 458 326 109 0 chr17 9792993 9793214 -75645266 + L1M4 LINE L1 2581 2825 -3321 324 316 88 0 chr17 9793280 9793394 -75645086 - L2 LINE L2 -2 3270 3147 371 298 71 0 chr17 9793901 9794069 -75644411 + MARNA DNA Mariner 329 508 -78 747 238 138 0 chr17 9794484 9794673 -75643807 - MIR SINE MIR -36 226 12 300 321 0 0 chr17 9794703 9794784 -75643696 - Charlie8 DNA MER1_type -2332 85 5 271 224 35 17 chr17 9795853 9795911 -75642569 + MIR SINE MIR 91 149 -59 672 168 0 0 chr17 9796190 9796315 -75642165 + (TG)n Simple_repeat Simple_repeat 1 125 0 571 215 97 14 chr17 9796387 9796531 -75641949 - L1ME3A LINE L1 -9 6161 6006 2109 100 10 3 chr17 9796627 9796927 -75641553 - AluSc SINE Alu -7 302 1 438 256 26 8 chr17 9796943 9797060 -75641420 - L2 LINE L2 -1328 1986 1868 285 97 0 48 chr17 9797603 9797665 -75640815 + (TTTC)n Simple_repeat Simple_repeat 2 60 0 2335 77 7 3 chr17 9797669 9797979 -75640501 - AluSq SINE Alu -2 311 1 287 294 55 60 chr17 9798450 9798651 -75639829 + MIR SINE MIR 32 231 -31 1472 167 10 61 chr17 9798935 9799098 -75639382 - AluJo SINE Alu -16 296 155 1727 139 0 77 chr17 9799098 9799421 -75639059 - AluSx SINE Alu -14 298 1 1472 167 10 61 chr17 9799421 9799569 -75638911 - AluJo SINE Alu -157 155 1 2120 93 0 7 chr17 9799866 9800156 -75638324 + AluSc SINE Alu 1 288 -21 1710 137 128 9 chr17 9800173 9800510 -75637970 + L1MB2 LINE L1 5795 6171 0 1813 57 0 25 chr17 9800771 9801045 -75637435 - L1PA8 LINE L1 0 6172 5929 783 151 0 8 chr17 9801045 9801171 -75637309 - FLAM_C SINE Alu -16 127 3 2077 112 3 0 chr17 9801382 9801676 -75636804 - AluSx SINE Alu -17 295 1 332 87 0 0 chr17 9801676 9801722 -75636758 - AluSq/x SINE Alu -168 135 90 743 270 98 14 chr17 9802901 9802977 -75635503 - MIR SINE MIR -27 235 167 2259 105 0 0 chr17 9802977 9803281 -75635199 + AluSx SINE Alu 1 304 -8 743 270 98 14 chr17 9803281 9803419 -75635061 - MIR SINE MIR -95 167 3 183 42 0 0 chr17 9803456 9803480 -75635000 + (TG)n Simple_repeat Simple_repeat 2 25 0 225 267 150 0 chr17 9803520 9803580 -75634900 - L2 LINE L2 -13 3300 3232 532 207 9 9 chr17 9803707 9803823 -75634657 + L1ME3A LINE L1 6046 6161 -9 300 111 0 0 chr17 9804020 9804065 -75634415 + (TTCC)n Simple_repeat Simple_repeat 4 48 0 1954 105 17 10 chr17 9804068 9804362 -75634118 - AluSq SINE Alu -16 297 2 397 61 0 61 chr17 9804378 9804444 -75634036 + L1PA16 LINE L1 6103 6164 -2 2121 114 0 25 chr17 9805063 9805378 -75633102 - AluSx SINE Alu -1 311 5 21 0 0 0 chr17 9805715 9805736 -75632744 + AT_rich Low_complexity Low_complexity 1 21 0 717 272 39 15 chr17 9806670 9806876 -75631604 + MIR SINE MIR 1 211 -51 1022 117 13 0 chr17 9806965 9807119 -75631361 - AluSg/x SINE Alu -9 303 148 1310 195 44 41 chr17 9807578 9807791 -75630689 + MLT1A1 LTR MaLR 1 217 -148 1565 153 85 3 chr17 9807791 9808073 -75630407 + AluJo SINE Alu 1 305 -7 1310 195 44 41 chr17 9808073 9808202 -75630278 + MLT1A1 LTR MaLR 217 344 -21 192 309 29 0 chr17 9808614 9808682 -75629798 - MIR SINE MIR -42 220 151 431 279 53 21 chr17 9808865 9809055 -75629425 + MIR3 SINE MIR 8 203 -5 971 233 73 37 chr17 9809590 9809890 -75628590 - MLT1I LTR MaLR -1 408 98 556 210 156 27 chr17 9810285 9810471 -75628009 + MER63A DNA MER1_type 1 210 0 222 345 69 43 chr17 9810502 9810618 -75627862 + L2 LINE L2 3101 3219 -53 2232 139 43 114 chr17 9810881 9811398 -75627082 + LTR12 LTR ERV1 1 480 -234 198 182 0 0 chr17 9812205 9812238 -75626242 + MIR SINE MIR 73 105 -157 559 169 0 0 chr17 9812688 9812777 -75625703 - FLAM_A SINE Alu -49 93 5 392 303 103 9 chr17 9813285 9813462 -75625018 + MIR SINE MIR 47 249 -13 2711 167 53 46 chr17 9814305 9814831 -75623649 - LTR31 LTR ERV1 -15 604 75 2473 262 102 61 chr17 9814925 9816348 -75622132 - HAL1 LINE L1 -607 1900 420 291 233 56 11 chr17 9816568 9816658 -75621822 - HAL1 LINE L1 -2370 137 44 680 269 44 26 chr17 9816811 9817038 -75621442 + MIR SINE MIR 32 262 0 2180 112 0 0 chr17 9817289 9817592 -75620888 + AluSq SINE Alu 1 303 -10 259 281 61 26 chr17 9817715 9817829 -75620651 + MIR SINE MIR 86 203 -59 260 413 35 6 chr17 9818350 9818469 -75620011 - MER5B DNA MER1_type -1 177 50 1212 107 0 73 chr17 9818469 9818674 -75619806 - MER30B DNA MER1_type 0 190 1 260 413 35 6 chr17 9818674 9818726 -75619754 - MER5B DNA MER1_type -128 50 1 446 180 168 31 chr17 9818940 9819101 -75619379 - Charlie7 DNA MER1_type -5 2607 2425 598 217 17 0 chr17 9819370 9819485 -75618995 + FLAM_C SINE Alu 1 117 -16 21 0 0 0 chr17 9819485 9819506 -75618974 + AT_rich Low_complexity Low_complexity 1 21 0 229 229 73 42 chr17 9820320 9820416 -75618064 + Tigger3(Golem) DNA MER2_type 2218 2316 -713 2099 120 3 0 chr17 9820867 9821168 -75617312 - AluSp SINE Alu -11 302 1 1096 259 97 78 chr17 9821230 9821755 -75616725 - MER34 LTR ERV1 0 542 8 872 270 4 44 chr17 9821858 9822084 -75616396 - MIR SINE MIR 0 262 46 202 227 23 0 chr17 9822152 9822196 -75616284 + L2 LINE L2 3269 3313 0 1016 160 53 70 chr17 9822460 9822600 -75615880 + L1MD3 LINE L1 7756 7892 -103 2213 56 42 0 chr17 9822600 9822887 -75615593 + AluYa5 SINE Alu 2 300 -11 1016 160 53 70 chr17 9822887 9822990 -75615490 + L1MD3 LINE L1 7892 7995 0 923 251 97 28 chr17 9823089 9823408 -75615072 - MER102b DNA MER1_type 0 341 1 321 304 5 98 chr17 9824060 9824124 -75614356 - MER5B DNA MER1_type 0 178 110 1380 188 53 18 chr17 9824124 9824246 -75614234 + AluJo SINE Alu 1 117 -195 797 0 11 0 chr17 9824246 9824339 -75614141 + (TAAAA)n Simple_repeat Simple_repeat 5 98 0 1380 188 53 18 chr17 9824339 9824498 -75613982 + AluJo SINE Alu 117 292 -20 321 304 5 98 chr17 9824498 9824627 -75613853 - MER5B DNA MER1_type -68 110 3 230 273 115 18 chr17 9824843 9824956 -75613524 + MIR SINE MIR 30 153 -93 295 227 172 62 chr17 9825135 9825263 -75613217 - L2 LINE L2 0 3313 3172 482 233 169 97 chr17 9826036 9826370 -75612110 - MLT1G LTR MaLR -41 549 168 2685 3 0 0 chr17 9826370 9826667 -75611813 - AluYa5 SINE Alu -10 301 5 482 233 169 97 chr17 9826667 9826827 -75611653 - MLT1G LTR MaLR -422 168 21 289 294 100 48 chr17 9826931 9827200 -75611280 + L1M4 LINE L1 15 297 -6245 3079 237 53 73 chr17 9827350 9829256 -75609224 + L1M4 LINE L1 533 2555 -4270 413 261 163 38 chr17 9829273 9829457 -75609023 - MIR SINE MIR -54 208 2 314 254 0 0 chr17 9830073 9830140 -75608340 - MLT1G1 LTR MaLR 0 555 489 1161 112 0 6 chr17 9830140 9830365 -75608115 - AluSp SINE Alu 0 341 118 801 239 77 107 chr17 9830376 9830807 -75607673 - MLT1G1 LTR MaLR -113 454 37 1963 96 11 4 chr17 9832237 9832543 -75605937 + AluSq SINE Alu 1 308 0 293 377 27 6 chr17 9833225 9833399 -75605081 + MIR SINE MIR 9 184 -61 2074 129 0 16 chr17 9833448 9833758 -75604722 - AluSx SINE Alu -7 305 1 225 250 0 0 chr17 9834000 9834048 -75604432 + L2 LINE L2 3196 3243 -70 372 315 108 14 chr17 9834048 9834308 -75604172 + L2 LINE L2 2969 3308 -5 348 333 86 12 chr17 9835077 9835239 -75603241 - MER5A DNA MER1_type -15 174 1 397 198 105 0 chr17 9836100 9836186 -75602294 + MER53 DNA DNA 1 95 -94 313 185 99 12 chr17 9836116 9836197 -75602283 - MER53 DNA DNA -7 182 95 * 741 226 145 47 chr17 9836268 9836648 -75601832 - MER96B DNA MER1_type 0 417 1 228 240 27 53 chr17 9836824 9836899 -75601581 + L2 LINE L2 3194 3266 -6 481 213 27 53 chr17 9837393 9837432 -75601048 - MER5B DNA MER1_type -1 177 138 2039 110 3 19 chr17 9837432 9837749 -75600731 - AluSx SINE Alu 0 312 1 481 213 27 53 chr17 9837749 9837859 -75600621 - MER5B DNA MER1_type -40 138 32 4457 172 63 21 chr17 9837860 9837914 -75600566 - L1MB3 LINE L1 0 6183 6133 2213 93 3 0 chr17 9837914 9838215 -75600265 - AluSx SINE Alu -10 302 1 4457 172 63 21 chr17 9838215 9839191 -75599289 - L1MB3 LINE L1 -50 6133 5107 194 279 0 0 chr17 9839197 9839240 -75599240 - MER5B DNA MER1_type -130 48 6 208 261 0 62 chr17 9839975 9840040 -75598440 - MIR SINE MIR -60 148 88 1544 300 42 15 chr17 9840070 9840596 -75597884 + MLT1K LTR MaLR 41 580 -8 194 245 19 0 chr17 9841217 9841270 -75597210 + MIR SINE MIR 101 154 -108 268 265 48 12 chr17 9841659 9841742 -75596738 + MIR SINE MIR 66 151 -57 495 333 111 44 chr17 9841766 9842632 -75595848 + L2 LINE L2 2328 3238 -34 324 120 0 0 chr17 9842974 9843024 -75595456 + (TG)n Simple_repeat Simple_repeat 1 50 0 283 157 0 20 chr17 9844145 9844196 -75594284 + L2 LINE L2 3261 3310 -3 507 237 114 0 chr17 9844658 9844789 -75593691 + MER96 DNA MER1_type? 3 148 -27 248 229 93 73 chr17 9845010 9845215 -75593265 + Charlie8 DNA MER1_type 117 1426 -991 606 291 44 60 chr17 9845247 9845680 -75592800 + LTR16B LTR ERVL 36 461 -3 1363 214 4 4 chr17 9846155 9846436 -75592044 + L1 LINE L1 4958 5238 -908 401 250 0 20 chr17 9846809 9846909 -75591571 - MIR SINE MIR -88 120 23 375 207 43 24 chr17 9846981 9847145 -75591335 + CT-rich Low_complexity Low_complexity 3 169 0 656 240 139 35 chr17 9847593 9847707 -75590773 + L1ME4a LINE L1 5715 5816 -305 2155 76 31 0 chr17 9847707 9847995 -75590485 + AluSq SINE Alu 1 297 -16 656 240 139 35 chr17 9847995 9848246 -75590234 + L1ME4a LINE L1 5816 6118 -3 293 95 0 0 chr17 9848266 9848308 -75590172 + MADE1 DNA Mariner 3 44 -36 3138 156 44 29 chr17 9848664 9848949 -75589531 - MER7C DNA MER2_type -2427 601 322 2361 102 0 7 chr17 9848949 9849254 -75589226 + AluSx SINE Alu 1 303 -9 3138 156 44 29 chr17 9849254 9849558 -75588922 - MER7C DNA MER2_type -2706 322 3 462 248 35 9 chr17 9850602 9850715 -75587765 + MIR SINE MIR 5 120 -142 399 218 65 17 chr17 9850731 9850959 -75587521 + L2 LINE L2 2997 3310 -3 287 292 106 0 chr17 9850954 9851067 -75587413 + MIR SINE MIR 138 262 0 * 450 267 18 61 chr17 9851194 9851285 -75587195 - Charlie8 DNA MER1_type -175 166 84 2275 96 3 7 chr17 9851285 9851586 -75586894 + AluSg SINE Alu 11 310 0 450 267 18 61 chr17 9851586 9851659 -75586821 - Charlie8 DNA MER1_type -257 84 9 1663 111 40 28 chr17 9852002 9852255 -75586225 - AluSx SINE Alu -22 290 35 2296 117 3 0 chr17 9852517 9852824 -75585656 - AluSg SINE Alu 0 310 3 808 271 92 0 chr17 9853972 9854234 -75584246 + L2 LINE L2 2383 2668 -646 736 281 242 10 chr17 9854520 9854908 -75583572 + L2 LINE L2 2836 3313 0 2086 117 0 0 chr17 9854914 9855187 -75583293 + AluSx SINE Alu 1 273 -39 180 0 0 0 chr17 9855187 9855207 -75583273 + (TC)n Simple_repeat Simple_repeat 2 21 0 205 274 0 16 chr17 9856206 9856268 -75582212 - MIR SINE MIR -61 147 87 180 298 24 24 chr17 9857345 9857429 -75581051 - MIR3 SINE MIR -35 173 90 942 230 123 14 chr17 9857820 9858177 -75580303 + L1ME2 LINE L1 5760 6155 -9 2281 101 0 0 chr17 9859229 9859517 -75578963 - AluY SINE Alu -23 288 1 415 301 27 60 chr17 9863302 9863485 -75574995 - MIR SINE MIR -35 227 51 225 313 0 0 chr17 9864403 9864467 -75574013 - MIR SINE MIR -163 99 36 423 0 0 0 chr17 9864962 9865009 -75573471 + (TG)n Simple_repeat Simple_repeat 2 48 0 189 0 0 0 chr17 9865175 9865196 -75573284 + (TG)n Simple_repeat Simple_repeat 1 21 0 284 326 10 0 chr17 9865529 9865627 -75572853 + MER5A DNA MER1_type 11 109 -80 2194 82 0 0 chr17 9866142 9866410 -75572070 - AluSg SINE Alu -5 305 38 759 233 18 54 chr17 9866619 9866670 -75571810 + MIR SINE MIR 5 56 -206 2647 43 0 0 chr17 9866670 9866969 -75571511 + AluY SINE Alu 1 299 -12 759 233 18 54 chr17 9866969 9867140 -75571340 + MIR SINE MIR 56 219 -43 348 64 0 0 chr17 9867175 9867222 -75571258 + (ATG)n Simple_repeat Simple_repeat 2 48 0 420 299 108 5 chr17 9867332 9867546 -75570934 + MIR SINE MIR 8 243 -19 2391 107 0 0 chr17 9867889 9868199 -75570281 - AluSg SINE Alu 0 310 1 188 119 0 24 chr17 9868210 9868252 -75570228 + (CAAAAA)n Simple_repeat Simple_repeat 2 42 0 211 278 0 0 chr17 9868337 9868409 -75570071 + A-rich Low_complexity Low_complexity 1 72 0 512 288 128 44 chr17 9868484 9869050 -75569430 + L1MC4a LINE L1 5320 5819 -302 1770 163 17 10 chr17 9869175 9869464 -75569016 - AluJo SINE Alu -21 291 1 22 35 0 0 chr17 9869470 9869499 -75568981 + AT_rich Low_complexity Low_complexity 1 29 0 387 125 8 125 chr17 9872072 9872159 -75566321 - L1MA8 LINE L1 -22 6269 6198 2180 95 58 0 chr17 9872159 9872279 -75566201 + AluSx SINE Alu 1 113 -199 420 20 0 0 chr17 9872279 9872328 -75566152 + (CA)n Simple_repeat Simple_repeat 2 50 0 2180 95 58 0 chr17 9872328 9872502 -75565978 + AluSx SINE Alu 113 312 0 387 125 8 125 chr17 9872502 9872534 -75565946 - L1MA8 LINE L1 -93 6198 6164 299 319 87 36 chr17 9872559 9872697 -75565783 + L2 LINE L2 3125 3269 -3 184 301 205 0 chr17 9872728 9872811 -75565669 - L2 LINE L2 -19 3253 3154 2414 48 0 34 chr17 9873088 9873414 -75565066 - AluY SINE Alu 0 316 1 282 319 88 9 chr17 9874219 9874332 -75564148 - MER5A DNA MER1_type -1 188 67 2445 85 0 10 chr17 9874461 9874768 -75563712 - AluY SINE Alu -6 305 2 611 245 80 11 chr17 9875034 9875222 -75563258 - MER112 DNA MER1_type 0 260 60 537 270 15 7 chr17 9875307 9875444 -75563036 - MIR3 SINE MIR -41 167 30 2502 81 0 0 chr17 9877187 9877485 -75560995 - AluSc SINE Alu -11 298 1 346 211 77 67 chr17 9877730 9877834 -75560646 - L2 LINE L2 -1 3271 3167 2227 96 0 0 chr17 9877883 9878216 -75560264 + AluY SINE Alu 1 333 0 1337 182 128 66 chr17 9878401 9878553 -75559927 - MER63B DNA MER1_type -630 432 291 1906 166 0 16 chr17 9878553 9878866 -75559614 + AluJo SINE Alu 1 308 -4 1337 182 128 66 chr17 9878866 9879120 -75559360 - MER63B DNA MER1_type -771 291 1 2057 131 6 38 chr17 9879720 9880040 -75558440 - AluSx SINE Alu -2 310 1 556 287 76 9 chr17 9880953 9881176 -75557304 + L1M4 LINE L1 4793 5030 -1116 223 250 10 104 chr17 9882799 9882895 -75555585 + L3 LINE CR1 1491 1577 0 3287 153 6 65 chr17 9882900 9883050 -75555430 - L1MB5 LINE L1 0 6174 6017 1459 187 35 81 chr17 9883050 9883217 -75555263 + MLT1B LTR MaLR 4 177 -213 1734 112 138 11 chr17 9883217 9883486 -75554994 + AluSg SINE Alu 1 303 -7 1459 187 35 81 chr17 9883486 9883724 -75554756 + MLT1B LTR MaLR 177 390 0 3287 153 6 65 chr17 9883724 9884266 -75554214 - L1MB5 LINE L1 -157 6017 5523 2310 86 3 0 chr17 9884607 9884899 -75553581 - AluSg SINE Alu -17 293 1 282 204 0 0 chr17 9885330 9885379 -75553101 + L2 LINE L2 3265 3313 0 188 259 0 69 chr17 9885365 9885423 -75553057 + MIR SINE MIR 91 144 -118 * 250 167 0 0 chr17 9886831 9886873 -75551607 + 5S rRNA rRNA 1 42 -79 2283 116 0 3 chr17 9886963 9887266 -75551214 + AluSx SINE Alu 1 302 -10 245 246 0 14 chr17 9887318 9887387 -75551093 + (TG)n Simple_repeat Simple_repeat 1 68 0 845 243 66 12 chr17 9887731 9887990 -75550490 - Charlie8 DNA MER1_type -2141 276 4 22 35 0 0 chr17 9888039 9888068 -75550412 + GC_rich Low_complexity Low_complexity 1 29 0 513 264 50 28 chr17 9888805 9888987 -75549493 + MIR SINE MIR 75 260 -2 23 68 0 0 chr17 9889071 9889115 -75549365 + AT_rich Low_complexity Low_complexity 1 44 0 186 294 206 0 chr17 9889388 9889514 -75548966 + MIR3 SINE MIR 46 197 -11 296 367 42 0 chr17 9890296 9890416 -75548064 + L2 LINE L2 2707 2831 -483 2071 116 0 50 chr17 9890681 9890984 -75547496 + AluSx SINE Alu 1 288 -24 439 160 13 0 chr17 9891057 9891132 -75547348 - L1MB7 LINE L1 -54 6130 6055 734 171 0 46 chr17 9891233 9891408 -75547072 - L1MB3 LINE L1 0 6183 6017 369 277 61 7 chr17 9891425 9891573 -75546907 - MIR3 SINE MIR -6 202 47 597 307 60 52 chr17 9892136 9892455 -75546025 + L1ME4a LINE L1 5514 5838 -283 2146 87 3 62 chr17 9892455 9892776 -75545704 + AluSp SINE Alu 1 302 -11 597 307 60 52 chr17 9892776 9892837 -75545643 + L1ME4a LINE L1 5838 5897 -224 1859 152 56 9 chr17 9892879 9893221 -75545259 + Tigger2 DNA MER2_type 2361 2718 0 2410 95 0 0 chr17 9893395 9893690 -75544790 + AluSg SINE Alu 1 295 -15 586 248 56 87 chr17 9894202 9894468 -75544012 - Charlie8 DNA MER1_type -2159 258 1 619 161 0 15 chr17 9894734 9894864 -75543616 + CT-rich Low_complexity Low_complexity 1 128 0 2140 120 3 7 chr17 9894864 9895156 -75543324 - AluSx SINE Alu -21 291 1 1754 174 14 17 chr17 9895217 9895505 -75542975 + AluJb SINE Alu 1 287 -25 2316 96 0 0 chr17 9895568 9895860 -75542620 + AluSg SINE Alu 1 292 -18 2504 76 3 13 chr17 9896467 9896782 -75541698 + AluSp SINE Alu 1 312 -1 493 158 278 0 chr17 9897104 9897237 -75541243 - MER5A DNA MER1_type -16 173 4 3845 97 3 15 chr17 9897357 9897384 -75541096 + L1PA13 LINE L1 5320 5346 -817 2476 86 0 3 chr17 9897384 9897685 -75540795 - AluSq SINE Alu -13 300 1 3845 97 3 15 chr17 9897685 9898245 -75540235 + L1PA13 LINE L1 5346 5900 -263 356 287 78 0 chr17 9898459 9898607 -75539873 - MIR SINE MIR -37 225 64 253 324 35 35 chr17 9898743 9898888 -75539592 + L2 LINE L2 3158 3302 -11 1109 177 13 44 chr17 9899573 9899799 -75538681 + MER20 DNA MER1_type 1 219 0 322 219 178 11 chr17 9899969 9900109 -75538371 - MIR3 SINE MIR -49 159 1 1200 187 9 27 chr17 9900403 9900628 -75537852 - MIR SINE MIR -31 231 11 329 217 87 11 chr17 9902012 9902104 -75536376 + MIR SINE MIR 30 128 -80 242 338 30 38 chr17 9902117 9902250 -75536230 - MER5A DNA MER1_type -6 183 52 373 204 135 9 chr17 9902868 9902985 -75535495 + MIR SINE MIR 18 149 -68 641 251 100 56 chr17 9902994 9903225 -75535255 - MIR SINE MIR -20 242 2 2349 112 0 0 chr17 9905172 9905475 -75533005 - AluSx SINE Alu -9 303 1 319 261 50 50 chr17 9905854 9905932 -75532548 + MIR SINE MIR 74 151 -111 301 292 23 46 chr17 9905932 9906062 -75532418 - MER5A DNA MER1_type 0 189 63 478 285 85 28 chr17 9906625 9906858 -75531622 - MIR SINE MIR -14 248 6 690 240 167 17 chr17 9907202 9907225 -75531255 + L1MC4 LINE L1 6683 6701 -1341 278 49 0 24 chr17 9907225 9907266 -75531214 + (CA)n Simple_repeat Simple_repeat 2 41 0 690 240 167 17 chr17 9907266 9907529 -75530951 + L1MC4 LINE L1 6701 7012 -1030 515 289 44 42 chr17 9907533 9908110 -75530370 + L1MD3 LINE L1 7074 7749 -246 * 1559 146 134 12 chr17 9908105 9908448 -75530032 + L1MB8 LINE L1 5784 6168 -10 744 222 21 7 chr17 9908573 9908717 -75529763 + FRAM SINE Alu 1 146 -30 449 244 88 66 chr17 9908720 9909065 -75529415 + L1MC5 LINE L1 7603 7917 -44 426 271 134 71 chr17 9909344 9909851 -75528629 + L2 LINE L2 2730 3270 -2 4321 69 21 0 chr17 9910113 9910678 -75527802 + L1PA8 LINE L1 5596 6172 0 2554 59 0 0 chr17 9910980 9911283 -75527197 - AluY SINE Alu -8 303 1 195 293 158 37 chr17 9911349 9911431 -75527049 + MIR SINE MIR 19 110 -98 771 210 0 36 chr17 9911698 9911865 -75526615 + FAM SINE Alu 1 161 -14 21 36 0 0 chr17 9912158 9912186 -75526294 + AT_rich Low_complexity Low_complexity 1 28 0 247 185 99 12 chr17 9912198 9912279 -75526201 - L1ME4a LINE L1 -13 6108 6021 714 237 40 6 chr17 9912282 9912459 -75526021 - MER20 DNA MER1_type 0 219 37 671 287 62 29 chr17 9912468 9912809 -75525671 - L1ME4a LINE L1 -90 6031 5680 462 305 24 42 chr17 9913303 9913470 -75525010 + MER5A DNA MER1_type 17 180 -9 296 164 0 14 chr17 9913790 9913863 -75524617 + (CAT)n Simple_repeat Simple_repeat 3 74 0 2218 92 0 7 chr17 9915333 9915616 -75522864 + AluSq SINE Alu 1 281 -32 230 0 33 0 chr17 9915618 9915648 -75522832 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 330 286 20 0 chr17 9915732 9915830 -75522650 + MER63 DNA MER1_type 27 752 -84 300 300 31 71 chr17 9915865 9916043 -75522437 + MIR SINE MIR 32 198 -62 901 117 0 36 chr17 9916100 9916237 -75522243 + FLAM_C SINE Alu 1 132 -1 1580 177 10 31 chr17 9916264 9916558 -75521922 + AluJb SINE Alu 1 288 -24 251 295 37 69 chr17 9917607 9918099 -75520381 + L1M4 LINE L1 2703 3178 -2968 2415 72 3 0 chr17 9918242 9918533 -75519947 - AluSx SINE Alu -14 298 7 2111 112 10 3 chr17 9920058 9920362 -75518118 + AluSq SINE Alu 1 306 -7 272 235 23 15 chr17 9920408 9920540 -75517940 + CT-rich Low_complexity Low_complexity 1 133 0 1011 228 37 0 chr17 9921930 9922171 -75516309 + L1MD3 LINE L1 7723 7972 -23 639 241 14 0 chr17 9922188 9922333 -75516147 - MER3 DNA MER1_type -62 147 1 1825 178 7 10 chr17 9922916 9923214 -75515266 + AluJb SINE Alu 1 297 -15 224 284 45 0 chr17 9923257 9923324 -75515156 - MIR3 SINE MIR -54 154 85 1396 168 40 94 chr17 9923373 9923670 -75514810 + AluJb SINE Alu 9 289 -23 323 213 12 38 chr17 9923675 9923755 -75514725 - HsTC2 DNA Tc2 -1813 85 8 1076 168 20 5 chr17 9923865 9924062 -75514418 - MER20 DNA MER1_type -2 217 18 280 242 0 0 chr17 9924126 9924188 -75514292 + MER103 DNA DNA 39 100 -66 39 0 0 0 chr17 9925040 9925079 -75513401 + AT_rich Low_complexity Low_complexity 1 39 0 293 250 33 0 chr17 9925255 9925347 -75513133 - HAL1b LINE L1 -428 920 826 445 295 68 53 chr17 9925652 9925859 -75512621 - L2 LINE L2 -41 3231 3022 409 304 138 12 chr17 9925921 9925995 -75512485 - L3 LINE CR1 -10 1567 1504 2101 142 3 0 chr17 9925995 9926305 -75512175 + AluSx SINE Alu 1 311 -1 409 304 138 12 chr17 9926305 9926470 -75512010 - L3 LINE CR1 -73 1504 1298 2261 92 3 0 chr17 9927480 9927880 -75510600 + AluSx SINE Alu 1 401 0 376 236 71 11 chr17 9927961 9928116 -75510364 - HAL1b LINE L1 -4 6117 1194 1960 160 0 3 chr17 9928195 9928488 -75509992 + AluJb SINE Alu 3 294 -18 2256 116 3 3 chr17 9928490 9928800 -75509680 + AluSx SINE Alu 1 310 -2 589 238 33 55 chr17 9928836 9929017 -75509463 + MIR SINE MIR 2 178 -84 422 308 14 28 chr17 9929148 9929291 -75509189 + MIR3 SINE MIR 45 185 -23 476 313 48 6 chr17 9929610 9929776 -75508704 + MIR SINE MIR 69 241 -21 612 248 130 36 chr17 9930619 9930950 -75507530 + LTR16A LTR ERVL 83 444 -6 198 0 0 0 chr17 9931869 9931891 -75506589 + (CAGGC)n Simple_repeat Simple_repeat 4 25 0 698 175 75 0 chr17 9932491 9932611 -75505869 + FLAM_A SINE Alu 1 129 -4 26 0 0 0 chr17 9932714 9932740 -75505740 + AT_rich Low_complexity Low_complexity 1 26 0 853 114 0 0 chr17 9933569 9933683 -75504797 + AluSg/x SINE Alu 180 293 -19 240 236 28 28 chr17 9933799 9933830 -75504650 - MIR SINE MIR -82 180 150 2262 76 48 3 chr17 9933830 9934120 -75504360 - AluY SINE Alu -8 303 1 240 236 28 28 chr17 9934120 9934160 -75504320 - MIR SINE MIR -111 151 109 470 217 58 25 chr17 9934326 9934446 -75504034 - L2 LINE L2 -2 3311 3188 825 277 84 28 chr17 9934576 9934743 -75503737 - L2 LINE L2 -126 3187 3031 1670 246 87 12 chr17 9934743 9934973 -75503507 - MLT1F LTR MaLR 0 542 331 2561 69 0 0 chr17 9934973 9935278 -75503202 + AluY SINE Alu 1 305 -6 1670 246 87 12 chr17 9935278 9935551 -75502929 - MLT1F LTR MaLR -211 331 1 825 277 84 28 chr17 9935551 9935740 -75502740 - L2 LINE L2 -282 3031 2811 410 196 10 8 chr17 9935754 9935858 -75502622 + MER5A DNA MER1_type 1 185 -4 372 290 117 42 chr17 9935859 9936073 -75502407 + MIR SINE MIR 14 243 -19 232 305 30 73 chr17 9936917 9937081 -75501399 + MER5A DNA MER1_type 3 159 -30 * 322 291 58 29 chr17 9936942 9937097 -75501383 - MER5A DNA MER1_type -6 172 7 38 22 0 0 chr17 9937548 9937593 -75500887 + AT_rich Low_complexity Low_complexity 1 45 0 7168 17 0 0 chr17 9937593 9938433 -75500047 - L1PA3 LINE L1 -4 6151 5312 * 11628 26 1 1 chr17 9938424 9939848 -75498632 + L1PA3 LINE L1 3899 5323 -823 438 274 20 68 chr17 9940464 9940610 -75497870 + L1MC/D LINE L1 5318 5456 -2352 312 288 194 29 chr17 9940685 9940855 -75497625 + L1MC/D LINE L1 5564 5761 -2047 3953 40 22 4 chr17 9941070 9941565 -75496915 + L1PA4 LINE L1 5652 6155 0 219 220 0 0 chr17 9941569 9941619 -75496861 + (TA)n Simple_repeat Simple_repeat 1 50 0 2437 88 0 3 chr17 9941619 9941925 -75496555 - AluSx SINE Alu -7 305 1 389 279 153 87 chr17 9941983 9942441 -75496039 + L1M4 LINE L1 4762 5249 -897 4081 198 62 5 chr17 9942445 9943258 -75495222 - MER21B LTR ERV1 -1 862 4 657 121 30 68 chr17 9943490 9943622 -75494858 + FLAM_C SINE Alu 17 143 0 188 188 42 0 chr17 9943663 9943711 -75494769 + GA-rich Low_complexity Low_complexity 5 54 0 2266 122 0 0 chr17 9944221 9944516 -75493964 + AluSx SINE Alu 1 295 -17 352 164 33 0 chr17 9944973 9945034 -75493446 - MER5A DNA MER1_type -1 188 126 1061 169 0 0 chr17 9945137 9945303 -75493177 - MER5A DNA MER1_type -23 166 1 313 233 67 8 chr17 9946294 9946414 -75492066 - L1ME4a LINE L1 0 6121 5995 239 237 102 0 chr17 9946557 9946616 -75491864 - MIR3 SINE MIR -22 186 122 1585 184 103 56 chr17 9947071 9947396 -75491084 - MLT1C LTR MaLR 0 467 114 4938 42 0 0 chr17 9947396 9947975 -75490505 - L1PA5 LINE L1 0 6154 5576 1585 184 103 56 chr17 9947975 9948095 -75490385 - MLT1C LTR MaLR -353 114 1 2205 98 0 0 chr17 9949715 9949990 -75488490 + AluSg SINE Alu 1 275 -35 192 40 0 0 chr17 9949991 9950016 -75488464 + (TC)n Simple_repeat Simple_repeat 2 26 0 450 293 0 0 chr17 9950020 9950187 -75488293 + (CATG)n Simple_repeat Simple_repeat 1 167 0 274 259 0 0 chr17 9950187 9950241 -75488239 + (TG)n Simple_repeat Simple_repeat 1 54 0 321 250 14 0 chr17 9950249 9950321 -75488159 - L1MCa LINE L1 -4358 2068 1996 * 339 211 56 0 chr17 9950294 9950365 -75488115 - L1MC4 LINE L1 -1339 6983 6909 486 279 32 7 chr17 9950513 9950667 -75487813 - Charlie8 DNA MER1_type -2206 211 54 180 333 0 0 chr17 9951198 9951246 -75487234 + L2 LINE L2 3189 3236 -77 2705 55 0 0 chr17 9951303 9951614 -75486866 - AluY SINE Alu 0 311 1 2423 84 3 6 chr17 9952328 9952639 -75485841 + AluSx SINE Alu 1 310 -2 2648 183 34 21 chr17 9952696 9953255 -75485225 - L1MB7 LINE L1 0 6184 5619 204 125 0 0 chr17 9953771 9953803 -75484677 + (CA)n Simple_repeat Simple_repeat 1 32 0 2754 3 7 3 chr17 9954024 9954322 -75484158 + AluYa5 SINE Alu 1 299 -12 894 135 14 14 chr17 9954545 9954686 -75483794 + FLAM_C SINE Alu 3 143 0 479 253 0 0 chr17 9954709 9954792 -75483688 + AluJb SINE Alu 135 217 -95 25 0 0 0 chr17 9954793 9954818 -75483662 + AT_rich Low_complexity Low_complexity 1 25 0 258 372 9 18 chr17 9955011 9955124 -75483356 + MIR SINE MIR 40 151 -57 2384 77 0 10 chr17 9955127 9955437 -75483043 - AluY SINE Alu -4 307 1 435 193 12 0 chr17 9955455 9955537 -75482943 - MER58A DNA MER1_type 0 224 142 1353 168 8 0 chr17 9955537 9955781 -75482699 - Tigger5 DNA MER2_type 0 2323 2078 346 181 108 12 chr17 9955777 9955860 -75482620 - Tigger5 DNA MER2_type -2232 91 1 * 724 199 7 27 chr17 9955860 9956006 -75482474 - MER58A DNA MER1_type 0 143 1 2498 70 7 0 chr17 9956680 9956980 -75481500 + AluSp SINE Alu 1 302 -11 2084 142 3 0 chr17 9957269 9957572 -75480908 - AluJb SINE Alu -8 304 1 1597 198 39 36 chr17 9957660 9957806 -75480674 + MLT1A1 LTR MaLR 6 150 -215 2477 81 0 3 chr17 9957806 9958116 -75480364 + AluY SINE Alu 1 309 -2 1597 198 39 36 chr17 9958116 9958328 -75480152 + MLT1A1 LTR MaLR 150 365 0 273 365 60 35 chr17 9959604 9959804 -75478676 + L2 LINE L2 3030 3234 -38 2195 92 0 7 chr17 9959858 9960167 -75478313 + AluSc SINE Alu 1 307 0 408 290 57 73 chr17 9960815 9961060 -75477420 + L2 LINE L2 3030 3270 -2 2537 63 0 0 chr17 9961089 9961389 -75477091 + AluY SINE Alu 1 300 -11 1455 143 39 130 chr17 9961480 9961640 -75476840 + AluJb SINE Alu 1 121 -191 1689 160 32 11 chr17 9961640 9961737 -75476743 + AluJb SINE Alu 24 117 -195 414 0 0 0 chr17 9961737 9961783 -75476697 + (TAA)n Simple_repeat Simple_repeat 2 47 0 1689 160 32 11 chr17 9961783 9961967 -75476513 + AluJb SINE Alu 117 311 -1 1455 143 39 130 chr17 9961967 9962114 -75476366 + AluJb SINE Alu 121 280 -32 435 19 0 0 chr17 9962114 9962166 -75476314 + (TAAA)n Simple_repeat Simple_repeat 1 52 0 2332 88 3 13 chr17 9962309 9962614 -75475866 - AluSx SINE Alu -10 302 1 1084 239 4 0 chr17 9962614 9962840 -75475640 + MER58B DNA MER1_type 115 341 0 357 347 75 6 chr17 9962969 9963142 -75475338 + L1MC4a LINE L1 5749 5933 -1875 2346 105 0 3 chr17 9965615 9965928 -75472552 + AluSx SINE Alu 1 312 0 255 281 37 0 chr17 9965947 9966029 -75472451 + L1ME4a LINE L1 6009 6093 -28 207 204 0 0 chr17 9966808 9966852 -75471628 + (CGTG)n Simple_repeat Simple_repeat 1 44 0 1983 145 17 3 chr17 9966961 9967258 -75471222 + AluJo SINE Alu 1 301 -11 203 343 96 30 chr17 9967496 9967694 -75470786 + MIR SINE MIR 40 250 -12 2115 196 86 10 chr17 9968320 9968819 -75469661 + L1MB5 LINE L1 5638 6174 0 2431 109 0 0 chr17 9968827 9969139 -75469341 + AluSx SINE Alu 1 312 0 332 269 141 51 chr17 9969562 9969718 -75468762 - MER91A DNA MER1_type -18 178 9 407 300 67 33 chr17 9969895 9970075 -75468405 - MIR SINE MIR -1 261 76 789 163 0 8 chr17 9970111 9970229 -75468251 + FLAM_C SINE Alu 6 123 -16 198 0 0 0 chr17 9970229 9970251 -75468229 + (TTAA)n Simple_repeat Simple_repeat 1 22 0 275 174 81 70 chr17 9970639 9970725 -75467755 + MER5A DNA MER1_type 1 87 -102 182 282 90 51 chr17 9972130 9972208 -75466272 + L2 LINE L2 3153 3233 -39 393 22 0 0 chr17 9972208 9972254 -75466226 + (TGAA)n Simple_repeat Simple_repeat 3 48 0 939 199 49 135 chr17 9972409 9972736 -75465744 + MLT1A1 LTR MaLR 1 292 -73 1221 163 65 108 chr17 9972736 9972864 -75465616 + AluJo SINE Alu 1 133 -179 2281 86 6 65 chr17 9972864 9973188 -75465292 - AluSc SINE Alu -4 305 1 1221 163 65 108 chr17 9973188 9973365 -75465115 + AluJo SINE Alu 133 293 -19 939 199 49 135 chr17 9973365 9973423 -75465057 + MLT1A1 LTR MaLR 292 353 -12 301 267 139 64 chr17 9973553 9973755 -75464725 + HAL1 LINE L1 945 1161 -1346 260 320 135 36 chr17 9974059 9974422 -75464058 + HAL1b LINE L1 309 707 -641 1879 180 7 0 chr17 9974557 9974862 -75463618 + AluSx SINE Alu 1 307 -5 372 191 176 37 chr17 9977425 9977561 -75460919 + MIR3 SINE MIR 20 174 -34 426 269 90 28 chr17 9979119 9979264 -75459216 + MIR3 SINE MIR 23 176 -32 2318 91 7 0 chr17 9979298 9979594 -75458886 - AluSx SINE Alu -14 298 1 375 290 219 0 chr17 9980275 9980430 -75458050 + MER5A DNA MER1_type 1 189 0 210 245 0 20 chr17 9981950 9981999 -75456481 + (CCCCAG)n Simple_repeat Simple_repeat 2 49 0 443 266 104 72 chr17 9982577 9982799 -75455681 + MIR SINE MIR 34 262 0 2064 156 84 57 chr17 9982862 9983061 -75455419 + L1MB3 LINE L1 5286 5478 -702 1958 143 31 3 chr17 9983061 9983355 -75455125 + AluSx SINE Alu 1 302 -10 2064 156 84 57 chr17 9983355 9983681 -75454799 + L1MB3 LINE L1 5478 5825 -355 1446 81 0 0 chr17 9983681 9983854 -75454626 - AluSg/x SINE Alu -8 302 130 1727 208 6 8 chr17 9983854 9984220 -75454260 + L1MB3 LINE L1 5819 6183 0 2218 128 0 3 chr17 9984385 9984689 -75453791 + AluSx SINE Alu 1 303 -9 477 264 29 21 chr17 9985042 9985182 -75453298 - MIR SINE MIR -16 246 106 2249 123 7 0 chr17 9985865 9986175 -75452305 + AluSx SINE Alu 1 312 0 2281 121 7 0 chr17 9987000 9987306 -75451174 + AluSg SINE Alu 1 308 -2 1170 170 33 37 chr17 9988377 9988618 -75449862 - Tigger2 DNA MER2_type -10 2708 2469 1671 147 12 78 chr17 9988618 9988952 -75449528 + AluJb SINE Alu 1 312 0 3805 165 42 8 chr17 9989022 9989743 -75448737 - Tigger2 DNA MER2_type -1973 745 1 2244 83 45 0 chr17 9989758 9990046 -75448434 + AluY SINE Alu 1 301 -10 2330 103 0 0 chr17 9990400 9990690 -75447790 + AluSx SINE Alu 1 290 -22 270 247 10 41 chr17 9990789 9990886 -75447594 + MER113 DNA MER1_type? 15 108 -413 2257 114 3 0 chr17 9991443 9991751 -75446729 + AluSg SINE Alu 2 310 0 624 62 0 0 chr17 9991756 9991837 -75446643 + (GGAA)n Simple_repeat Simple_repeat 4 84 0 311 0 0 25 chr17 9991847 9991887 -75446593 + (GAAAA)n Simple_repeat Simple_repeat 2 40 0 21 57 0 0 chr17 9992937 9992972 -75445508 + AT_rich Low_complexity Low_complexity 1 35 0 2048 116 0 50 chr17 9993005 9993323 -75445157 + AluSx SINE Alu 1 302 -10 352 167 115 0 chr17 9993423 9993501 -75444979 + L2 LINE L2 3187 3273 -40 44 35 0 0 chr17 9994518 9994576 -75443904 + AT_rich Low_complexity Low_complexity 1 58 0 2559 77 0 0 chr17 9994595 9994905 -75443575 - AluY SINE Alu -1 310 1 357 127 79 0 chr17 9995011 9995074 -75443406 + L1ME4a LINE L1 6039 6106 -15 378 259 12 0 chr17 9995332 9995417 -75443063 - MIR3 SINE MIR -12 196 111 355 343 80 29 chr17 9996036 9996211 -75442269 + MIR SINE MIR 52 235 -27 357 308 9 0 chr17 10046400 10046507 -75391973 - MER5A DNA MER1_type -80 109 2 774 253 116 67 chr17 10046585 10046989 -75391491 - Charlie8 DNA MER1_type -1956 461 38 448 269 85 28 chr17 10048107 10048248 -75390232 + MER112 DNA MER1_type 1 149 -111 674 161 136 8 chr17 10048548 10048666 -75389814 + AluJo SINE Alu 3 135 -177 1731 196 0 0 chr17 10048666 10048978 -75389502 + AluJo SINE Alu 1 312 0 1153 37 7 0 chr17 10049043 10049179 -75389301 + AluY SINE Alu 1 137 -174 182 36 0 36 chr17 10049179 10049207 -75389273 + (TCTCCC)n Simple_repeat Simple_repeat 2 28 0 6862 69 6 13 chr17 10049211 10050747 -75387733 + SVA Other Other 2 1411 0 1294 77 6 0 chr17 10050751 10050921 -75387559 + AluY SINE Alu 127 297 -14 242 308 84 9 chr17 10051261 10051368 -75387112 - MIR SINE MIR -128 134 20 344 304 32 38 chr17 10051566 10051724 -75386756 + MIR3 SINE MIR 46 202 -6 258 228 114 38 chr17 10052715 10052794 -75385686 + MIR3 SINE MIR 70 154 -54 905 233 0 0 chr17 10053109 10053285 -75385195 + L1ME LINE L1 5457 5632 -534 381 189 11 21 chr17 10053294 10053389 -75385091 + MER20 DNA MER1_type 3 96 -123 422 194 10 10 chr17 10054390 10054493 -75383987 + MER20 DNA MER1_type 117 219 0 2102 138 0 0 chr17 10054656 10054968 -75383512 + AluSx SINE Alu 1 312 0 207 204 0 0 chr17 10055719 10055768 -75382712 + (TG)n Simple_repeat Simple_repeat 1 49 0 807 236 166 78 chr17 10056812 10057294 -75381186 + MLT1K LTR MaLR 11 546 -42 1587 172 41 4 chr17 10057294 10057562 -75380918 - AluJo SINE Alu -21 291 14 807 236 166 78 chr17 10057562 10057608 -75380872 + MLT1K LTR MaLR 546 586 -2 1514 232 71 25 chr17 10057766 10058205 -75380275 - MLT1D LTR MaLR -33 472 14 2185 83 4 0 chr17 10058668 10058933 -75379547 - AluSp SINE Alu -47 266 1 783 178 0 15 chr17 10058954 10059089 -75379391 - FLAM_C SINE Alu 0 133 1 391 292 74 60 chr17 10059289 10059505 -75378975 + MIR SINE MIR 6 224 -38 2244 101 10 0 chr17 10059705 10059993 -75378487 - AluSg SINE Alu -19 291 1 2663 202 23 44 chr17 10060833 10060927 -75377553 - MER68 LTR ERV1 0 562 468 1951 131 3 31 chr17 10060927 10061217 -75377263 + AluJo SINE Alu 1 282 -30 2663 202 23 44 chr17 10061217 10061695 -75376785 - MER68 LTR ERV1 -94 468 2 298 284 73 0 chr17 10061740 10061849 -75376631 - L3 LINE CR1 -58 1519 1403 251 254 103 29 chr17 10061980 10062094 -75376386 - MIR3 SINE MIR -42 166 49 617 263 31 5 chr17 10062152 10062526 -75375954 + MER113 DNA MER1_type? 31 479 -42 2435 79 0 13 chr17 10062802 10063118 -75375362 - AluSx SINE Alu 0 312 1 531 65 39 0 chr17 10063349 10063426 -75375054 - MADE1 DNA Mariner 0 80 1 290 284 246 8 chr17 10063643 10063777 -75374703 + MIR SINE MIR 18 183 -79 244 287 0 43 chr17 10063978 10064072 -75374408 + Charlie8 DNA MER1_type 16 105 -2312 2221 106 33 0 chr17 10064097 10064212 -75374268 + AluSx SINE Alu 1 111 -201 207 0 0 0 chr17 10064212 10064235 -75374245 + (TAA)n Simple_repeat Simple_repeat 2 24 0 2221 106 33 0 chr17 10064235 10064421 -75374059 + AluSx SINE Alu 111 312 0 361 224 102 0 chr17 10064524 10064622 -75373858 + MER5B DNA MER1_type 1 108 -70 183 139 0 0 chr17 10065346 10065382 -75373098 + (A)n Simple_repeat Simple_repeat 1 36 0 350 220 291 35 chr17 10065971 10066112 -75372368 + MER5A DNA MER1_type 12 188 -1 306 178 228 30 chr17 10066423 10066524 -75371956 - L2 LINE L2 -14 3299 3179 318 284 71 10 chr17 10067015 10067212 -75371268 + L1ME3A LINE L1 3403 3611 -2535 429 292 105 24 chr17 10067339 10067530 -75370950 + L1ME3A LINE L1 3808 3982 -2164 2280 118 3 0 chr17 10067530 10067834 -75370646 + AluSg SINE Alu 1 305 -5 429 292 105 24 chr17 10067834 10067974 -75370506 + L1ME3A LINE L1 3982 4166 -1980 1777 162 0 18 chr17 10067987 10068271 -75370209 + AluJo SINE Alu 21 299 -13 1703 175 0 11 chr17 10068271 10068534 -75369946 + AluSx SINE Alu 1 260 -52 593 192 8 51 chr17 10068560 10068925 -75369555 + GA-rich Low_complexity Low_complexity 1 349 0 234 184 0 0 chr17 10068925 10068963 -75369517 + A-rich Low_complexity Low_complexity 2 39 0 698 291 43 75 chr17 10069106 10069636 -75368844 + MER34 LTR ERV1 1 513 -29 413 264 196 43 chr17 10069712 10070201 -75368279 + HAL1 LINE L1 2 565 -1942 654 244 95 8 chr17 10070223 10070465 -75368015 + HAL1 LINE L1 1680 1942 -565 216 0 0 0 chr17 10070508 10070532 -75367948 + (TG)n Simple_repeat Simple_repeat 1 24 0 1943 160 0 0 chr17 10070532 10070846 -75367634 - AluJb SINE Alu 0 314 1 319 287 78 61 chr17 10070988 10071218 -75367262 + HAL1 LINE L1 2105 2338 -169 1272 152 14 38 chr17 10071221 10071431 -75367049 + AluJo SINE Alu 1 205 -107 317 302 70 0 chr17 10071437 10071523 -75366957 + HAL1 LINE L1 1779 1870 -637 419 198 0 0 chr17 10071526 10071607 -75366873 + AluJ/FRAM SINE Alu 216 296 -16 2640 138 99 22 chr17 10071730 10072293 -75366187 + MER4B LTR ERV1 1 903 0 4143 103 19 19 chr17 10072416 10073046 -75365434 + MER41B LTR ERV1 6 635 0 660 328 78 17 chr17 10073047 10073613 -75364867 + L1ME3A LINE L1 4475 5094 -1052 2366 81 0 7 chr17 10073613 10073908 -75364572 - AluSg SINE Alu -17 293 1 660 328 78 17 chr17 10073908 10074045 -75364435 + L1ME3A LINE L1 5094 5221 -925 703 317 111 17 chr17 10074051 10074629 -75363851 + L1ME3A LINE L1 5313 5944 -226 2420 240 66 21 chr17 10074838 10075619 -75362861 + L1ME1 LINE L1 5364 6332 -2 24 0 0 0 chr17 10075667 10075691 -75362789 + AT_rich Low_complexity Low_complexity 1 24 0 765 189 8 0 chr17 10075700 10075832 -75362648 + AluJo/FLAM SINE Alu 1 133 -169 1063 157 0 34 chr17 10075832 10075879 -75362601 + AluSg/x SINE Alu 134 181 -131 6006 0 0 0 chr17 10075879 10076515 -75361965 - LTR27 LTR ERV1 0 636 1 1063 157 0 34 chr17 10076515 10076645 -75361835 + AluSg/x SINE Alu 181 305 -7 281 218 127 45 chr17 10076776 10076886 -75361594 - MIR3 SINE MIR -9 199 81 2357 104 0 0 chr17 10076923 10077221 -75361259 - AluSq SINE Alu -15 298 1 299 245 20 20 chr17 10077594 10077692 -75360788 + LTR67 LTR ERVL 460 557 0 2573 59 0 28 chr17 10077856 10078176 -75360304 + AluY SINE Alu 1 311 0 466 304 145 5 chr17 10078188 10078402 -75360078 - MIR SINE MIR -6 256 13 1579 96 0 0 chr17 10080478 10080713 -75357767 + AluSg/x SINE Alu 84 318 0 2311 109 3 10 chr17 10081330 10081643 -75356837 + AluSx SINE Alu 1 311 -1 2281 98 0 3 chr17 10082340 10082637 -75355843 + AluSx SINE Alu 1 296 -16 266 262 37 13 chr17 10083185 10083273 -75355207 - MIR3 SINE MIR -50 158 68 234 238 85 55 chr17 10083458 10083622 -75354858 + L2 LINE L2 2537 2705 -609 1030 171 44 15 chr17 10083628 10083833 -75354647 + L1MB5 LINE L1 5925 6135 -39 2227 115 0 10 chr17 10083836 10084140 -75354340 - AluSc SINE Alu -8 301 1 1499 144 0 13 chr17 10084144 10084373 -75354107 - AluJb SINE Alu -20 292 67 863 295 169 16 chr17 10084439 10084937 -75353543 + L2 LINE L2 2728 3313 0 1640 203 119 43 chr17 10085048 10085517 -75352963 - MLT1D LTR MaLR 0 505 1 2114 79 79 0 chr17 10085750 10086028 -75352452 + AluSc SINE Alu 1 300 -9 279 337 88 33 chr17 10086800 10086912 -75351568 + MIR SINE MIR 1 128 -134 2490 87 0 0 chr17 10086912 10087222 -75351258 - AluY SINE Alu -1 310 1 279 337 88 33 chr17 10087222 10087290 -75351190 + MIR SINE MIR 128 191 -71 396 271 294 0 chr17 10087481 10087651 -75350829 + MIR SINE MIR 18 237 -25 455 72 188 0 chr17 10087846 10087915 -75350565 - AluJb SINE Alu -229 83 2 2147 93 61 0 chr17 10087998 10088276 -75350204 + AluSc SINE Alu 5 299 -10 230 290 0 0 chr17 10089300 10089369 -75349111 + MLT1K LTR MaLR 509 577 -11 189 102 122 20 chr17 10089994 10090043 -75348437 - L3 LINE CR1 -944 633 580 2358 97 0 0 chr17 10090216 10090514 -75347966 + AluSx SINE Alu 1 298 -14 2512 66 10 0 chr17 10091132 10091433 -75347047 + AluY SINE Alu 1 304 -7 250 271 157 50 chr17 10091472 10091612 -75346868 + MIR3 SINE MIR 27 181 -27 266 140 140 0 chr17 10093303 10093360 -75345120 + MLT1K LTR MaLR 378 442 -146 879 226 243 58 chr17 10093376 10093442 -75345038 - MLT1E LTR MaLR -2 591 538 848 155 0 0 chr17 10093442 10093571 -75344909 + FLAM_A SINE Alu 1 129 -4 879 226 243 58 chr17 10093571 10094003 -75344477 - MLT1E LTR MaLR -55 538 1 296 213 32 64 chr17 10094160 10094254 -75344226 + L2 LINE L2 570 660 -2654 240 35 0 0 chr17 10094660 10094689 -75343791 + (A)n Simple_repeat Simple_repeat 1 29 0 193 240 20 0 chr17 10095021 10095071 -75343409 + L2 LINE L2 764 814 -2500 341 290 0 0 chr17 10095086 10095179 -75343301 + MER5B DNA MER1_type 7 99 -79 319 227 0 53 chr17 10095432 10095507 -75342973 + MER5A DNA MER1_type 5 75 -114 1598 181 31 24 chr17 10095524 10095811 -75342669 + AluJb SINE Alu 1 289 -23 2376 98 0 13 chr17 10095998 10096313 -75342167 + AluSx SINE Alu 1 311 -1 1428 277 182 37 chr17 10096450 10097526 -75340954 + L2 LINE L2 1658 2889 -425 330 174 0 81 chr17 10097534 10097620 -75340860 - MER3 DNA MER1_type 0 209 131 640 248 47 0 chr17 10097815 10097964 -75340516 - MER3 DNA MER1_type -53 156 1 647 304 59 45 chr17 10097972 10098327 -75340153 + L2 LINE L2 2898 3257 -56 222 309 11 11 chr17 10098886 10098980 -75339500 + MER5B DNA MER1_type 8 101 -77 311 59 0 0 chr17 10099052 10099103 -75339377 - L1MA4A LINE L1 -275 6028 5978 1637 207 92 36 chr17 10099216 10099694 -75338786 + MLT1D LTR MaLR 1 505 0 710 184 26 33 chr17 10099736 10099888 -75338592 - LTR32 LTR ERVL 0 471 321 246 83 0 0 chr17 10099899 10099935 -75338545 - LTR32 LTR ERVL -119 352 317 239 111 0 0 chr17 10099942 10099978 -75338502 - LTR32 LTR ERVL -119 352 317 228 139 0 0 chr17 10100025 10100061 -75338419 - LTR32 LTR ERVL -119 352 317 259 83 0 0 chr17 10100106 10100142 -75338338 - LTR32 LTR ERVL -119 352 317 235 111 0 0 chr17 10100353 10100389 -75338091 - LTR32 LTR ERVL -119 352 317 2135 149 3 3 chr17 10100589 10100931 -75337549 - LTR32 LTR ERVL -122 349 8 367 164 15 0 chr17 10100944 10101011 -75337469 - MER46A DNA MER2_type -131 105 38 3115 144 16 134 chr17 10101052 10102090 -75336390 + L1MA4A LINE L1 4755 5685 -627 1027 104 0 8 chr17 10102091 10102225 -75336255 + AluSq/x SINE Alu 1 133 -179 2415 87 0 0 chr17 10102228 10102528 -75335952 + AluSg SINE Alu 1 300 -10 3330 140 27 27 chr17 10102529 10102921 -75335559 + L1MA4A LINE L1 5670 6064 -239 2275 108 0 20 chr17 10102921 10103226 -75335254 - AluSx SINE Alu -13 299 1 3330 140 27 27 chr17 10103226 10103467 -75335013 + L1MA4A LINE L1 6063 6303 0 1674 131 91 7 chr17 10103573 10103707 -75334773 + AluSx SINE Alu 1 122 -190 1997 122 4 0 chr17 10103707 10104014 -75334466 + AluY SINE Alu 1 308 0 1674 131 91 7 chr17 10104014 10104152 -75334328 + AluSx SINE Alu 122 297 -15 493 240 222 0 chr17 10104389 10104560 -75333920 - MER3 DNA MER1_type 0 209 1 2252 114 3 13 chr17 10104908 10105339 -75333141 + AluSp SINE Alu 1 428 0 712 337 10 24 chr17 10105611 10105902 -75332578 + L1MC/D LINE L1 5464 5750 -2058 1965 139 0 42 chr17 10106367 10106676 -75331804 - AluJb SINE Alu -10 302 7 333 0 0 0 chr17 10107151 10107188 -75331292 + (CA)n Simple_repeat Simple_repeat 1 37 0 219 133 0 0 chr17 10107472 10107517 -75330963 + (TCTG)n Simple_repeat Simple_repeat 4 48 0 2120 127 0 13 chr17 10108483 10108782 -75329698 + AluSx SINE Alu 1 295 -17 972 270 179 59 chr17 10109148 10109421 -75329059 - L2 LINE L2 0 3313 3074 2653 159 50 10 chr17 10109421 10109905 -75328575 - MLT1D LTR MaLR -2 503 1 972 270 179 59 chr17 10109905 10110441 -75328039 - L2 LINE L2 -239 3074 2389 199 208 0 42 chr17 10110478 10110526 -75327954 - L2 LINE L2 -1000 2314 2269 2247 107 24 0 chr17 10110883 10111181 -75327299 + AluSx SINE Alu 1 305 -7 549 247 18 120 chr17 10111441 10111724 -75326756 - L2 LINE L2 0 3313 3060 208 194 0 0 chr17 10111838 10111874 -75326606 - L2 LINE L2 -98 3215 3180 2039 103 0 4 chr17 10112923 10113196 -75325284 + AluSq SINE Alu 41 312 -1 888 247 49 21 chr17 10113530 10113553 -75324927 + MIR SINE MIR 13 34 -228 2346 92 0 19 chr17 10113553 10113870 -75324610 + AluSx SINE Alu 1 311 -1 888 247 49 21 chr17 10113870 10114089 -75324391 + MIR SINE MIR 34 262 0 1999 157 0 6 chr17 10115275 10115587 -75322893 - AluJb SINE Alu -2 310 1 706 179 13 64 chr17 10115696 10115852 -75322628 - MER5A DNA MER1_type -40 149 2 190 273 0 0 chr17 10115852 10115896 -75322584 - L3b LINE CR1 -6 1577 1534 459 225 154 115 chr17 10117058 10117088 -75321392 + L1ME4a LINE L1 5551 5578 -543 2250 93 13 19 chr17 10117088 10117399 -75321081 + AluSx SINE Alu 1 309 -3 459 225 154 115 chr17 10117399 10117690 -75320790 + L1ME4a LINE L1 5578 5890 -231 2210 118 3 25 chr17 10117690 10118004 -75320476 + AluSq SINE Alu 1 307 -6 459 225 154 115 chr17 10118004 10118037 -75320443 + L1ME4a LINE L1 5890 5920 -201 623 197 0 16 chr17 10118773 10119097 -75319383 + (CA)n Simple_repeat Simple_repeat 1 318 0 367 198 135 27 chr17 10119268 10119379 -75319101 + MIR SINE MIR 19 141 -121 2341 76 33 13 chr17 10121073 10121377 -75317103 - AluY SINE Alu -1 310 1 4160 171 25 59 chr17 10121534 10121706 -75316774 + L1MB7 LINE L1 4863 5039 -1145 1768 179 6 22 chr17 10121706 10122018 -75316462 + AluJo SINE Alu 1 307 -5 4160 171 25 59 chr17 10122018 10122346 -75316134 + L1MB7 LINE L1 5039 5377 -807 2416 88 10 0 chr17 10122346 10122651 -75315829 + AluSg SINE Alu 1 308 -2 4160 171 25 59 chr17 10122651 10123486 -75314994 + L1MB7 LINE L1 5377 6176 -8 2374 104 3 0 chr17 10123795 10124102 -75314378 + AluSx SINE Alu 1 308 -4 367 340 0 15 chr17 10124106 10124355 -75314125 + (CATG)n Simple_repeat Simple_repeat 1 245 0 1995 121 35 7 chr17 10124938 10125227 -75313253 + AluSx SINE Alu 1 297 -15 396 212 35 18 chr17 10125539 10125569 -75312911 - MER46A DNA MER2_type -2552 179 151 2211 117 13 10 chr17 10125569 10125877 -75312603 - AluSx SINE Alu -3 309 1 2621 129 61 30 chr17 10125880 10126375 -75312105 - L1MA8 LINE L1 -1 6290 5781 396 212 35 18 chr17 10126375 10126453 -75312027 - MER46A DNA MER2_type -2581 150 65 2385 65 0 7 chr17 10126480 10126774 -75311706 - AluY SINE Alu -8 303 12 1365 158 57 11 chr17 10126774 10127029 -75311451 - L1MA8 LINE L1 -513 5778 5509 2247 186 22 52 chr17 10127058 10127291 -75311189 - MER66B LTR ERV1 0 486 248 2278 102 0 3 chr17 10127291 10127586 -75310894 - AluSc SINE Alu -15 294 1 2247 186 22 52 chr17 10127586 10127853 -75310627 - MER66B LTR ERV1 -238 248 1 1313 225 132 78 chr17 10128980 10129291 -75309189 + L2 LINE L2 2494 2787 -526 1745 156 31 10 chr17 10129291 10129580 -75308900 + AluJb SINE Alu 1 295 -17 1313 225 132 78 chr17 10129580 10129990 -75308490 + L2 LINE L2 2787 3275 -38 2288 121 0 3 chr17 10129990 10130295 -75308185 - AluSp SINE Alu -9 304 1 1313 225 132 78 chr17 10130295 10130331 -75308149 + L2 LINE L2 3275 3308 -5 2459 67 0 29 chr17 10130405 10130719 -75307761 - AluY SINE Alu -6 305 1 200 150 25 113 chr17 10130772 10130852 -75307628 - MIR SINE MIR -66 196 124 2231 81 0 14 chr17 10130937 10131259 -75307221 + AluSg SINE Alu 1 318 0 209 339 0 16 chr17 10131260 10131322 -75307158 - MIR3 SINE MIR -143 65 5 265 200 13 40 chr17 10131384 10131459 -75307021 + L1M4 LINE L1 3876 3948 -2198 301 274 128 39 chr17 10131673 10131852 -75306628 + L1M4 LINE L1 4333 4527 -1619 213 264 264 14 chr17 10131920 10132060 -75306420 - MIR SINE MIR -59 203 29 1724 249 169 9 chr17 10132097 10132622 -75305858 + MLT2F LTR ERVL 1 609 -54 1701 199 10 0 chr17 10132634 10132936 -75305544 + AluJb SINE Alu 1 305 -7 183 232 0 0 chr17 10132952 10133008 -75305472 + (TG)n Simple_repeat Simple_repeat 1 56 0 2227 73 17 0 chr17 10133622 10133909 -75304571 + AluY SINE Alu 1 292 -19 429 299 32 25 chr17 10134093 10134250 -75304230 + MIR SINE MIR 31 188 -74 2353 59 42 0 chr17 10134401 10134690 -75303790 + AluY SINE Alu 1 301 -10 2076 104 59 0 chr17 10134818 10135106 -75303374 - AluSx SINE Alu -7 305 1 1833 153 37 79 chr17 10135314 10135363 -75303117 + MLT1B LTR MaLR 1 51 -339 1989 110 0 38 chr17 10135363 10135653 -75302827 + AluSx SINE Alu 21 299 -13 1833 153 37 79 chr17 10135653 10135713 -75302767 + MLT1B LTR MaLR 51 112 -278 2210 119 0 3 chr17 10135713 10136015 -75302465 + AluSq SINE Alu 1 301 -12 1833 153 37 79 chr17 10136015 10136310 -75302170 + MLT1B LTR MaLR 112 389 -1 1949 162 7 13 chr17 10136994 10137302 -75301178 - AluJo SINE Alu -6 306 1 830 211 6 0 chr17 10138918 10139084 -75299396 + MER5A DNA MER1_type 14 180 -9 2224 38 94 0 chr17 10139157 10139423 -75299057 + AluY SINE Alu 1 291 -20 225 292 82 103 chr17 10140323 10140566 -75297914 + MIR SINE MIR 20 257 -5 2031 116 20 30 chr17 10140783 10141084 -75297396 + AluSg SINE Alu 1 298 -12 2445 73 3 0 chr17 10141084 10141384 -75297096 + AluY SINE Alu 1 301 -10 2239 135 0 0 chr17 10141545 10141857 -75296623 - AluSx SINE Alu 0 312 1 2925 174 30 29 chr17 10141986 10142582 -75295898 + L1MB7 LINE L1 5573 6169 -15 269 292 11 11 chr17 10142769 10142858 -75295622 + CT-rich Low_complexity Low_complexity 1 89 0 333 0 0 0 chr17 10142870 10142907 -75295573 + (CA)n Simple_repeat Simple_repeat 2 38 0 2233 113 3 3 chr17 10143042 10143343 -75295137 - AluSx SINE Alu -11 301 1 636 173 133 27 chr17 10143381 10143531 -75294949 + MIR SINE MIR 83 248 -14 764 194 0 0 chr17 10143630 10143754 -75294726 - FLAM_A SINE Alu -5 128 5 192 40 0 0 chr17 10143775 10143800 -75294680 + (TTTTTG)n Simple_repeat Simple_repeat 3 27 0 1715 185 0 4 chr17 10144009 10144290 -75294190 - AluJo SINE Alu -22 290 11 299 261 54 36 chr17 10144412 10144523 -75293957 - MLT1K LTR MaLR -6 582 470 246 283 91 17 chr17 10144901 10145022 -75293458 - MIR3 SINE MIR -37 171 69 1852 125 20 59 chr17 10145370 10145674 -75292806 + AluSx SINE Alu 1 292 -20 2220 88 3 60 chr17 10145676 10145995 -75292485 + AluSg SINE Alu 3 303 -7 472 241 28 57 chr17 10146085 10146226 -75292254 - MIR SINE MIR -40 222 86 1356 152 4 52 chr17 10146239 10146469 -75292011 + AluJo SINE Alu 1 219 -93 29 28 0 0 chr17 10146624 10146660 -75291820 + AT_rich Low_complexity Low_complexity 1 36 0 1885 176 0 16 chr17 10146673 10146979 -75291501 + AluJb SINE Alu 3 303 -9 719 138 0 125 chr17 10146985 10147137 -75291343 + AluJo SINE Alu 1 133 -169 213 276 53 79 chr17 10147144 10147220 -75291260 - MIR SINE MIR -188 74 1 387 0 0 0 chr17 10147368 10147411 -75291069 + (CA)n Simple_repeat Simple_repeat 2 44 0 2406 74 0 7 chr17 10147473 10147770 -75290710 - AluSx SINE Alu -17 295 1 788 228 112 0 chr17 10148205 10148402 -75290078 - MIR SINE MIR -40 222 4 353 314 55 27 chr17 10148960 10149180 -75289300 + LTR33 LTR ERVL 1 226 -295 870 195 0 74 chr17 10150315 10150458 -75288022 + AluJo SINE Alu 137 264 -48 2441 74 0 10 chr17 10150458 10150767 -75287713 - AluY SINE Alu -5 306 1 870 195 0 74 chr17 10150767 10150813 -75287667 + AluJo SINE Alu 264 312 0 851 164 0 8 chr17 10150818 10150952 -75287528 + FLAM_C SINE Alu 1 133 0 262 172 130 83 chr17 10151026 10151195 -75287285 + L1MC4 LINE L1 7865 8041 -1 1850 151 0 17 chr17 10151227 10151519 -75286961 + AluJb SINE Alu 1 287 -25 288 0 0 0 chr17 10151520 10151552 -75286928 + (TA)n Simple_repeat Simple_repeat 2 33 0 1667 253 88 49 chr17 10151569 10152238 -75286242 + L1ME3A LINE L1 5433 6127 -43 1899 158 24 0 chr17 10152241 10152533 -75285947 - AluJb SINE Alu -13 299 1 881 143 0 0 chr17 10152534 10152660 -75285820 - AluJb SINE Alu -186 126 1 547 317 55 11 chr17 10152845 10153028 -75285452 - MIR3 SINE MIR -1 207 17 871 213 6 0 chr17 10153169 10153333 -75285147 - FAM SINE Alu -9 166 2 357 24 0 0 chr17 10153391 10153433 -75285047 + (CA)n Simple_repeat Simple_repeat 1 42 0 730 289 45 42 chr17 10153450 10153782 -75284698 - MLT1K LTR MaLR -71 517 185 2610 52 0 10 chr17 10154237 10154543 -75283937 + AluY SINE Alu 1 303 -8 1474 174 36 3 chr17 10155176 10155481 -75282999 + L1MB3 LINE L1 5869 6183 0 1986 106 3 51 chr17 10155568 10155880 -75282600 - AluSx SINE Alu -15 297 1 30 0 0 0 chr17 10155880 10155910 -75282570 + AT_rich Low_complexity Low_complexity 1 30 0 351 302 128 39 chr17 10156256 10156435 -75282045 + MIR SINE MIR 68 262 0 247 227 359 16 chr17 10156477 10156605 -75281875 - MER5B DNA MER1_type 0 178 7 2459 77 0 3 chr17 10156615 10156914 -75281566 + AluSc SINE Alu 1 298 -11 989 194 0 28 chr17 10156971 10157321 -75281159 + FAM SINE Alu 1 209 0 1190 45 0 0 chr17 10157321 10157454 -75281026 + AluSq/x SINE Alu 1 133 -180 2327 91 0 25 chr17 10157457 10157776 -75280704 + AluY SINE Alu 1 311 0 2099 142 3 3 chr17 10158466 10158775 -75279705 - AluJo SINE Alu -1 311 3 320 345 45 34 chr17 10158998 10159175 -75279305 - L1ME4a LINE L1 -94 6027 5849 2502 72 23 0 chr17 10159499 10159805 -75278675 - AluSp SINE Alu 0 313 1 506 103 20 178 chr17 10160111 10160162 -75278318 - FLAM_A SINE Alu -169 142 85 1887 165 0 0 chr17 10160162 10160453 -75278027 - AluJb SINE Alu -21 291 1 506 103 20 178 chr17 10160453 10160547 -75277933 - FLAM_A SINE Alu -226 85 20 315 273 30 56 chr17 10160550 10160748 -75277732 + L1MC4a LINE L1 5695 5887 -1921 1178 209 0 8 chr17 10160867 10161101 -75277379 - MER106A DNA MER1_type -4 232 1 2421 81 3 0 chr17 10161145 10161440 -75277040 + AluSg SINE Alu 1 296 -14 2102 99 35 3 chr17 10161450 10161732 -75276748 + AluSg SINE Alu 1 291 -19 2499 230 120 43 chr17 10162060 10163220 -75275260 + L2 LINE L2 2035 3311 -2 310 221 197 33 chr17 10164186 10164308 -75274172 + MIR SINE MIR 70 211 -51 316 237 158 36 chr17 10164892 10165031 -75273449 + L1MCa LINE L1 1163 1318 -5108 2329 165 33 26 chr17 10165351 10165811 -75272669 + L1MB5 LINE L1 5711 6173 -1 2401 83 0 0 chr17 10165941 10166242 -75272238 + AluY SINE Alu 1 301 -10 205 280 140 28 chr17 10166515 10166622 -75271858 - L2 LINE L2 -25 3288 3170 2573 65 0 0 chr17 10166865 10167174 -75271306 + AluY SINE Alu 1 309 -2 241 296 48 64 chr17 10167285 10167311 -75271169 - L2 LINE L2 -95 3218 3193 2031 132 3 3 chr17 10167311 10167600 -75270880 - AluJb SINE Alu -23 289 1 241 296 48 64 chr17 10167600 10167698 -75270782 - L2 LINE L2 -120 3193 3096 1496 157 57 4 chr17 10167785 10168047 -75270433 - MLT1B LTR MaLR 0 390 115 246 32 0 0 chr17 10168047 10168078 -75270402 + (TTAG)n Simple_repeat Simple_repeat 2 32 0 783 180 16 0 chr17 10168125 10168253 -75270227 - AluJb SINE Alu -181 131 2 567 146 45 9 chr17 10168257 10168367 -75270113 - MLT1B LTR MaLR -272 118 5 279 216 59 20 chr17 10218685 10218787 -75219693 + L1MC5 LINE L1 7826 7931 -30 1529 179 4 8 chr17 10218788 10219056 -75219424 + AluJo SINE Alu 1 267 -45 4165 128 11 22 chr17 10219204 10219749 -75218731 - MER41B LTR ERV1 0 635 97 2450 69 0 0 chr17 10219749 10220054 -75218426 + AluY SINE Alu 1 305 -6 4165 128 11 22 chr17 10220054 10220150 -75218330 - MER41B LTR ERV1 -538 97 1 1225 128 41 0 chr17 10220517 10220713 -75217767 - LTR54 LTR ERV1 0 510 307 2018 118 0 19 chr17 10220716 10221029 -75217451 + AluSx SINE Alu 1 307 -5 1301 113 77 31 chr17 10221029 10221040 -75217440 - LTR54 LTR ERV1 -269 241 232 1558 159 20 33 chr17 10221040 10221342 -75217138 + AluJo SINE Alu 1 298 -14 1301 113 77 31 chr17 10221342 10221552 -75216928 - LTR54 LTR ERV1 -278 232 10 2219 88 3 7 chr17 10221647 10221942 -75216538 + AluSp SINE Alu 1 294 -19 2115 108 3 3 chr17 10222638 10222945 -75215535 - AluSx SINE Alu -5 307 1 287 331 129 7 chr17 10223111 10223250 -75215230 - MER5B DNA MER1_type -18 160 5 323 297 155 7 chr17 10223261 10223352 -75215128 - MER5B DNA MER1_type 0 178 102 1847 163 0 0 chr17 10223352 10223659 -75214821 - AluSx SINE Alu -5 307 1 323 297 155 7 chr17 10223659 10223722 -75214758 - MER5B DNA MER1_type -76 102 1 2092 93 0 59 chr17 10224304 10224625 -75213855 - AluSx SINE Alu -2 310 9 782 183 0 0 chr17 10225066 10225186 -75213294 - FLAM_A SINE Alu -13 120 1 2282 92 0 0 chr17 10225190 10225493 -75212987 - AluSc SINE Alu -6 303 1 1745 207 20 17 chr17 10225498 10225851 -75212629 - MLT1F LTR MaLR -62 480 127 1152 113 0 0 chr17 10225854 10226013 -75212467 - AluSp SINE Alu -18 295 137 575 225 17 8 chr17 10226022 10226142 -75212338 - MLT1F LTR MaLR -417 125 5 313 311 19 9 chr17 10226169 10226275 -75212205 + MER91A DNA MER1_type 6 112 -84 2164 97 0 0 chr17 10226303 10226593 -75211887 - AluSc SINE Alu -9 300 11 543 309 122 61 chr17 10226671 10227115 -75211365 - MLT1K LTR MaLR -8 580 110 1099 73 9 23 chr17 10227164 10227383 -75211097 + (GAAA)n Simple_repeat Simple_repeat 2 217 0 1414 195 51 48 chr17 10227476 10227871 -75210609 + MSTD LTR MaLR 1 396 0 1694 134 21 25 chr17 10228161 10228445 -75210035 - AluJo SINE Alu -19 293 11 2011 118 3 0 chr17 10228552 10228839 -75209641 + AluSx SINE Alu 5 292 -20 2213 97 3 0 chr17 10229152 10229450 -75209030 + AluSp SINE Alu 2 300 -13 309 135 0 19 chr17 10229677 10229729 -75208751 - MADE1 DNA Mariner 0 80 30 2185 100 3 3 chr17 10230035 10230346 -75208134 + AluSp SINE Alu 1 311 -2 303 240 48 39 chr17 10230444 10230522 -75207958 - MER113 DNA MER1_type? -414 107 31 2090 184 15 90 chr17 10230522 10230841 -75207639 - MLT1D LTR MaLR -2 503 240 243 0 0 0 chr17 10230847 10230874 -75207606 + (TG)n Simple_repeat Simple_repeat 2 28 0 1675 127 94 0 chr17 10230874 10231142 -75207338 - AluSx SINE Alu -5 307 11 2090 184 15 90 chr17 10231142 10231366 -75207114 - MLT1D LTR MaLR -265 240 1 303 240 48 39 chr17 10231366 10231391 -75207089 - MER113 DNA MER1_type? -490 31 3 2268 87 0 7 chr17 10231544 10231853 -75206627 + AluSc SINE Alu 3 309 0 246 323 75 30 chr17 10233322 10233455 -75205025 + MIR3 SINE MIR 3 141 -67 1881 184 52 0 chr17 10233516 10233863 -75204617 - MLT1A1 LTR MaLR 0 365 1 1813 154 0 0 chr17 10233938 10234217 -75204263 - AluSx SINE Alu -29 283 5 370 263 70 0 chr17 10234843 10234957 -75203523 + Charlie8 DNA MER1_type 52 173 -2244 * 660 143 9 36 chr17 10234955 10235067 -75203413 - Charlie3 DNA MER1_type -2601 109 1 346 287 9 9 chr17 10235072 10235187 -75203293 - L2 LINE L2 -654 2660 2546 2227 90 10 3 chr17 10235191 10235502 -75202978 + AluSp SINE Alu 1 313 0 2113 105 3 6 chr17 10235906 10236219 -75202261 - AluSx SINE Alu 0 312 1 232 304 179 9 chr17 10236223 10236335 -75202145 + L2 LINE L2 2924 3054 -218 575 192 128 0 chr17 10236408 10236533 -75201947 + MER96 DNA MER1_type? 35 175 0 2070 94 3 7 chr17 10237251 10237538 -75200942 - AluSx SINE Alu -26 286 1 439 271 63 58 chr17 10237541 10237576 -75200904 + L2 LINE L2 3106 3139 -174 2173 124 27 43 chr17 10237576 10237733 -75200747 + THE1B LTR MaLR 1 159 -205 2079 78 0 0 chr17 10237733 10238004 -75200476 - AluY SINE Alu -2 309 39 2173 124 27 43 chr17 10238004 10238216 -75200264 + THE1B LTR MaLR 159 364 0 439 271 63 58 chr17 10238216 10238387 -75200093 + L2 LINE L2 3139 3313 0 763 272 195 43 chr17 10238534 10239042 -75199438 + MLT1G1 LTR MaLR 11 595 0 754 159 8 45 chr17 10239076 10239208 -75199272 + FLAM_C SINE Alu 1 127 -6 296 315 99 33 chr17 10240191 10240372 -75198108 + MIR SINE MIR 32 224 -38 224 226 97 32 chr17 10240372 10240434 -75198046 + MIR SINE MIR 120 185 -77 1665 146 48 3 chr17 10240515 10240633 -75197847 + AluSx SINE Alu 1 112 -200 441 0 0 0 chr17 10240633 10240682 -75197798 + (CA)n Simple_repeat Simple_repeat 2 50 0 1665 146 48 3 chr17 10240682 10240857 -75197623 + AluSx SINE Alu 112 307 -5 579 236 93 80 chr17 10240959 10241184 -75197296 - MLT1L LTR MaLR -174 392 110 707 230 16 47 chr17 10241341 10241448 -75197032 - MIR SINE MIR -10 252 152 1995 104 35 0 chr17 10241448 10241736 -75196744 - AluSp SINE Alu -15 298 1 707 230 16 47 chr17 10241736 10241819 -75196661 - MIR SINE MIR -110 152 68 1632 53 0 19 chr17 10242703 10242912 -75195568 + AluY SINE Alu 97 301 -10 2002 111 3 29 chr17 10243184 10243490 -75194990 - AluSx SINE Alu -14 298 1 445 190 49 33 chr17 10243497 10243644 -75194836 - MER106B DNA MER1_type -82 977 3 1136 214 120 79 chr17 10243670 10243798 -75194682 - MLT1A1 LTR MaLR -2 363 242 2093 104 7 3 chr17 10243798 10244096 -75194384 + AluSq SINE Alu 1 299 -14 1136 214 120 79 chr17 10244096 10244309 -75194171 - MLT1A1 LTR MaLR -123 242 8 1031 242 133 32 chr17 10244473 10244812 -75193668 - MLT1E LTR MaLR 0 593 221 248 257 0 27 chr17 10244820 10244894 -75193586 + GA-rich Low_complexity Low_complexity 1 72 0 306 215 194 32 chr17 10244921 10245014 -75193466 - MLT1F LTR MaLR -466 76 3 2226 89 0 16 chr17 10245291 10245605 -75192875 - AluY SINE Alu 0 311 3 568 281 111 38 chr17 10245763 10245998 -75192482 + MIR SINE MIR 8 259 -3 572 339 27 14 chr17 10246172 10246393 -75192087 - MIR SINE MIR -11 251 28 458 220 135 64 chr17 10246908 10246959 -75191521 - LTR67 LTR ERVL -2 555 509 2231 112 0 0 chr17 10246959 10247262 -75191218 + AluSx SINE Alu 1 303 -9 458 220 135 64 chr17 10247262 10247351 -75191129 - LTR67 LTR ERVL -48 509 405 1563 177 50 0 chr17 10247412 10247695 -75190785 + AluJb SINE Alu 1 297 -15 307 202 79 11 chr17 10247696 10247785 -75190695 + L1MC5 LINE L1 7755 7849 -112 554 218 65 0 chr17 10247840 10247964 -75190516 + L1PB4 LINE L1 6022 6153 -3 3510 160 10 42 chr17 10247985 10248692 -75189788 - L1MB8 LINE L1 -6 6172 5489 25 0 0 0 chr17 10248696 10248721 -75189759 + AT_rich Low_complexity Low_complexity 1 25 0 1770 115 4 0 chr17 10248760 10249013 -75189467 - AluSx SINE Alu -17 295 42 4896 160 51 13 chr17 10249023 10250183 -75188297 - L1MB4 LINE L1 -38 6142 4930 2037 142 3 0 chr17 10250242 10250553 -75187927 + AluSx SINE Alu 1 312 0 415 249 54 95 chr17 10250672 10250893 -75187587 - MLT1J LTR MaLR -71 440 229 2473 55 6 10 chr17 10250986 10251298 -75187182 - AluY SINE Alu 0 311 1 502 246 47 47 chr17 10251504 10251698 -75186782 - Charlie8 DNA MER1_type -2233 184 1 774 247 114 0 chr17 10251709 10251936 -75186544 + L3 LINE CR1 1237 1489 -88 187 261 22 0 chr17 10251931 10251977 -75186503 + MIR3 SINE MIR 159 205 -3 * 774 234 35 0 chr17 10252334 10252505 -75185975 + MER45A DNA AcHobo 1 177 -1 1436 172 0 30 chr17 10252559 10252827 -75185653 - AluJb SINE Alu -37 275 16 1276 148 122 130 chr17 10253034 10253102 -75185378 - MLT1A2 LTR MaLR 0 374 307 2105 138 0 0 chr17 10253102 10253414 -75185066 - AluSx SINE Alu 0 312 1 1276 148 122 130 chr17 10253414 10253722 -75184758 - MLT1A2 LTR MaLR -67 307 1 1243 196 191 45 chr17 10253846 10254245 -75184235 + MSTB2 LTR MaLR 1 457 0 2206 112 0 0 chr17 10254388 10254693 -75183787 - AluSc SINE Alu -4 305 1 2310 106 0 25 chr17 10254733 10255070 -75183410 - AluSx SINE Alu 0 329 1 208 65 0 0 chr17 10255070 10255083 -75183397 + (TTTG)n Simple_repeat Simple_repeat 2 180 0 234 0 0 0 chr17 10255210 10255236 -75183244 + (CAA)n Simple_repeat Simple_repeat 2 27 0 1133 280 122 48 chr17 10255723 10256248 -75182232 + MLT1K LTR MaLR 2 565 -23 2190 119 10 6 chr17 10256300 10256683 -75181797 + AluSq SINE Alu 1 384 0 509 315 93 14 chr17 10257374 10257590 -75180890 - MIR SINE MIR -27 235 3 269 211 0 67 chr17 10257624 10257714 -75180766 - L1ME4a LINE L1 -207 5914 5831 472 220 151 5 chr17 10257716 10257902 -75180578 - L1MC5 LINE L1 -35 7926 7714 549 205 153 95 chr17 10258169 10258318 -75180162 - MER3 DNA MER1_type 0 209 45 1991 155 0 13 chr17 10258318 10258634 -75179846 - AluJb SINE Alu 0 312 1 549 205 153 95 chr17 10258634 10258674 -75179806 - MER3 DNA MER1_type -164 45 9 1539 166 111 31 chr17 10259919 10260280 -75178200 - MLT1F LTR MaLR 0 542 169 514 237 26 46 chr17 10260681 10260833 -75177647 - MLT1F LTR MaLR -393 149 1 329 283 54 24 chr17 10260990 10261156 -75177324 - L1ME4a LINE L1 0 6121 5951 606 250 8 0 chr17 10261177 10261309 -75177171 - FLAM_A SINE Alu 0 133 1 21 71 0 0 chr17 10261507 10261549 -75176931 + AT_rich Low_complexity Low_complexity 1 42 0 2345 100 0 3 chr17 10261711 10262020 -75176460 - AluSx SINE Alu -4 308 1 1535 189 70 0 chr17 10262044 10262158 -75176322 + AluJb SINE Alu 2 107 -205 399 41 0 0 chr17 10262158 10262207 -75176273 + (CA)n Simple_repeat Simple_repeat 2 50 0 1535 189 70 0 chr17 10262207 10262362 -75176118 + AluJb SINE Alu 107 290 -22 26 50 0 0 chr17 10262386 10262426 -75176054 + AT_rich Low_complexity Low_complexity 1 40 0 1783 142 0 1 chr17 10262563 10262605 -75175875 - L1P4 LINE L1 -464 5702 5661 2145 114 10 3 chr17 10262605 10262903 -75175577 - AluSx SINE Alu -12 300 1 1783 142 0 1 chr17 10262903 10263170 -75175310 - L1P4 LINE L1 -505 5661 5394 576 294 46 40 chr17 10263166 10263294 -75175186 - L1ME4a LINE L1 -219 5951 5825 * 2245 89 3 33 chr17 10263294 10263598 -75174882 - AluSg SINE Alu -15 295 1 576 294 46 40 chr17 10263598 10263772 -75174708 - L1ME4a LINE L1 -345 5825 5647 460 254 0 9 chr17 10263784 10263898 -75174582 - MER5B DNA MER1_type -15 163 51 885 147 0 0 chr17 10263919 10264048 -75174432 - FLAM_C SINE Alu -4 129 1 2337 104 3 0 chr17 10264076 10264383 -75174097 + AluSp SINE Alu 1 308 -5 6594 42 0 89 chr17 10264389 10265314 -75173166 + L1PA7 LINE L1 5312 6154 0 2050 102 11 18 chr17 10265338 10265622 -75172858 + AluSx SINE Alu 1 282 -30 452 283 170 22 chr17 10265672 10265853 -75172627 - L1ME4a LINE L1 -490 5672 5464 197 298 250 0 chr17 10267057 10267161 -75171319 + MIR SINE MIR 132 261 -1 23 33 0 0 chr17 10267162 10267192 -75171288 + AT_rich Low_complexity Low_complexity 1 30 0 577 245 0 14 chr17 10267234 10267373 -75171107 + L2 LINE L2 3176 3312 -1 818 263 84 20 chr17 10267447 10267838 -75170642 + L1ME4a LINE L1 5704 6119 -2 887 199 48 15 chr17 10267992 10268198 -75170282 - LTR67 LTR ERVL 0 557 345 622 275 17 0 chr17 10268266 10268444 -75170036 + MER5A DNA MER1_type 9 189 0 2099 144 0 16 chr17 10268512 10268857 -75169623 + AluSx SINE Alu 2 312 0 258 253 16 134 chr17 10268882 10269068 -75169412 - LTR67 LTR ERVL -387 170 7 475 310 6 44 chr17 10269133 10269220 -75169260 + L1ME4a LINE L1 4976 5065 -1081 2305 96 0 32 chr17 10269220 10269532 -75168948 - AluSq SINE Alu -11 302 1 475 310 6 44 chr17 10269532 10269805 -75168675 + L1ME4a LINE L1 5065 5322 -824 593 174 65 76 chr17 10269817 10269868 -75168612 - MLT1F1 LTR MaLR 0 567 517 1783 176 6 29 chr17 10269868 10270181 -75168299 - AluJo SINE Alu -6 306 1 593 174 65 76 chr17 10270181 10270313 -75168167 - MLT1F1 LTR MaLR -50 517 386 521 205 113 51 chr17 10270421 10270616 -75167864 + L1ME4a LINE L1 5522 5728 -393 2555 77 0 0 chr17 10270726 10271036 -75167444 + AluY SINE Alu 1 310 -1 238 224 45 83 chr17 10271050 10271159 -75167321 + L1ME4a LINE L1 5961 6064 -57 2484 87 0 3 chr17 10271159 10271468 -75167012 - AluSx SINE Alu -4 308 1 238 224 45 83 chr17 10271468 10271514 -75166966 + L1ME4a LINE L1 6064 6110 -11 402 327 53 19 chr17 10271687 10271950 -75166530 + L3 LINE CR1 1128 1399 -178 256 244 39 13 chr17 10271973 10272051 -75166429 - LTR67 LTR ERVL -2 555 476 2194 103 0 3 chr17 10272309 10272599 -75165881 - AluSg SINE Alu -21 289 1 205 256 0 0 chr17 10273499 10273542 -75164938 - L2 LINE L2 -22 3291 3249 726 245 67 114 chr17 10273546 10274011 -75164469 - LTR67 LTR ERVL -7 550 108 287 308 70 2 chr17 10274112 10274260 -75164220 - MIR SINE MIR -61 147 21 203 179 89 0 chr17 10274292 10274348 -75164132 - MIR SINE MIR -83 179 119 2473 111 5 45 chr17 10274509 10274724 -75163756 - THE1B LTR MaLR 0 364 169 2158 82 54 7 chr17 10274724 10275004 -75163476 + AluY SINE Alu 1 293 -18 2473 111 5 45 chr17 10275004 10275167 -75163313 - THE1B LTR MaLR -195 169 1 268 326 20 34 chr17 10275940 10276087 -75162393 + L2 LINE L2 2937 3081 -191 1656 185 24 0 chr17 10276465 10276752 -75161728 - AluJb SINE Alu -18 294 1 185 224 121 0 chr17 10276753 10276811 -75161669 - MIR SINE MIR -83 179 115 2574 77 0 0 chr17 10277052 10277363 -75161117 + AluY SINE Alu 1 311 0 465 206 0 0 chr17 10277621 10277728 -75160752 + (TGGA)n Simple_repeat Simple_repeat 4 110 0 2356 106 0 0 chr17 10278356 10278658 -75159822 - AluSx SINE Alu -10 302 1 552 242 88 33 chr17 10279081 10279343 -75159137 + MLT1L LTR MaLR 71 451 -164 1506 178 70 7 chr17 10279352 10279638 -75158842 + AluJo SINE Alu 1 304 -8 705 141 27 7 chr17 10279639 10279788 -75158692 + GA-rich Low_complexity Low_complexity 4 155 0 2318 110 3 0 chr17 10279796 10280105 -75158375 + AluSp SINE Alu 1 310 -3 261 237 40 13 chr17 10280155 10280231 -75158249 + MLT1L LTR MaLR 537 614 -1 2000 156 0 3 chr17 10280373 10280675 -75157805 - AluJb SINE Alu -11 301 1 1711 189 0 25 chr17 10280721 10281038 -75157442 - AluJo SINE Alu -3 309 1 552 214 8 8 chr17 10281144 10281270 -75157210 + L2 LINE L2 3188 3313 0 557 218 16 0 chr17 10281986 10282110 -75156370 - MIR SINE MIR -11 251 126 296 182 0 61 chr17 10282117 10282183 -75156297 - L2 LINE L2 -7 3306 3245 2118 110 7 26 chr17 10282204 10282512 -75155968 - AluSx SINE Alu -10 302 1 317 278 211 0 chr17 10283593 10283773 -75154707 + MIR SINE MIR 31 248 -14 1592 134 50 64 chr17 10284750 10284943 -75153537 - AluJb SINE Alu -5 307 118 2757 33 0 0 chr17 10284943 10285250 -75153230 + AluY SINE Alu 1 307 -4 1592 134 50 64 chr17 10285250 10285339 -75153141 - AluJb SINE Alu -194 118 29 222 174 0 0 chr17 10285428 10285474 -75153006 + (TTCA)n Simple_repeat Simple_repeat 3 48 0 216 174 43 0 chr17 10285594 10285640 -75152840 + A-rich Low_complexity Low_complexity 2 49 0 294 84 37 19 chr17 10286186 10286248 -75152232 + L1MB2 LINE L1 6012 6074 -106 382 278 6 81 chr17 10286658 10286831 -75151649 - HAL1b LINE L1 -436 912 753 573 88 36 146 chr17 10286855 10286904 -75151576 - L1MB3 LINE L1 -11 6172 6119 2168 131 3 0 chr17 10286904 10287209 -75151271 - AluSx SINE Alu -6 306 1 573 88 36 146 chr17 10287209 10287296 -75151184 - L1MB3 LINE L1 -64 6119 6051 371 202 24 4 chr17 10287303 10287387 -75151093 + AluJo SINE Alu 1 56 -246 852 181 0 0 chr17 10287387 10287514 -75150966 - AluJb SINE Alu -55 257 131 1520 148 12 0 chr17 10287515 10287758 -75150722 + AluJo SINE Alu 66 311 -1 4086 170 27 29 chr17 10287765 10288908 -75149572 - L1MB3 LINE L1 -172 6011 4865 1798 154 73 20 chr17 10288908 10289264 -75149216 - THE1C LTR MaLR 0 375 1 4086 170 27 29 chr17 10289264 10289483 -75148997 - L1MB3 LINE L1 -1318 4865 4647 1844 186 112 23 chr17 10289599 10290028 -75148452 - MLT1C LTR MaLR 0 467 1 580 263 116 17 chr17 10290279 10290511 -75147969 + MIR SINE MIR 5 259 -3 1865 156 20 3 chr17 10290639 10290941 -75147539 - AluSq SINE Alu -6 307 1 286 227 0 13 chr17 10290946 10291021 -75147459 - L1MB3 LINE L1 -1460 4686 4613 291 182 0 0 chr17 10291021 10291098 -75147382 + GA-rich Low_complexity Low_complexity 2 78 0 374 221 115 25 chr17 10291125 10291247 -75147233 - L1MB3 LINE L1 -1526 4620 4488 921 174 79 0 chr17 10291509 10291687 -75146793 + LTR47A LTR ERVL 261 452 0 246 279 12 47 chr17 10291698 10291870 -75146610 - L1MB3 LINE L1 -1674 4472 4307 1683 171 0 45 chr17 10291886 10292195 -75146285 + AluJb SINE Alu 1 295 -17 1346 199 4 4 chr17 10292212 10292478 -75146002 - L1MD3 LINE L1 -1 7994 7729 1950 240 66 31 chr17 10292518 10293217 -75145263 - L1MB3 LINE L1 -1870 4276 3554 2450 87 3 0 chr17 10293258 10293567 -75144913 + AluSp SINE Alu 1 310 -3 1458 162 46 18 chr17 10294333 10294660 -75143820 - Charlie1 DNA MER1_type -6 2755 2420 1811 83 21 0 chr17 10294668 10294909 -75143571 - L1P4 LINE L1 -347 5819 5574 908 133 8 0 chr17 10294910 10295038 -75143442 - AluSq/x SINE Alu -184 129 1 5523 185 6 42 chr17 10295038 10295994 -75142486 - L1 LINE L1 -1890 4256 3350 1405 102 15 5 chr17 10295994 10296200 -75142280 - L1PB2 LINE L1 -1 6150 5943 5523 185 6 42 chr17 10296200 10296448 -75142032 - L1 LINE L1 -2796 3350 3095 201 278 69 0 chr17 10296455 10296527 -75141953 - L3 LINE CR1 -191 1386 1310 1043 176 11 0 chr17 10296536 10296723 -75141757 + MER5A DNA MER1_type 1 189 0 202 103 0 0 chr17 10296734 10296763 -75141717 - MER5C DNA MER1_type -4 320 292 2354 102 3 3 chr17 10296903 10297216 -75141264 + AluSq SINE Alu 1 313 0 331 272 39 10 chr17 10297222 10297325 -75141155 - MER5C DNA MER1_type -214 110 5 373 198 35 0 chr17 10297395 10297488 -75140992 - MER5A DNA MER1_type -89 100 4 378 274 33 26 chr17 10297497 10297650 -75140830 - L3 LINE CR1 -266 1311 1158 615 266 55 10 chr17 10298648 10298847 -75139633 + MIR SINE MIR 49 256 -6 2163 120 16 45 chr17 10299236 10299611 -75138869 + THE1B LTR MaLR 1 364 0 1031 249 99 78 chr17 10300340 10300765 -75137715 + MLT1K LTR MaLR 94 527 -61 2255 99 0 0 chr17 10301026 10301328 -75137152 - AluSx SINE Alu 0 302 1 2018 188 53 2 chr17 10301389 10301804 -75136676 + MER63B DNA MER1_type 1 436 0 909 226 157 63 chr17 10302101 10302143 -75136337 - LTR33 LTR ERVL 0 521 484 2173 116 162 8 chr17 10302143 10302514 -75135966 - MSTA LTR MaLR 0 428 1 909 226 157 63 chr17 10302514 10302931 -75135549 - LTR33 LTR ERVL -37 484 19 212 304 109 22 chr17 10303287 10303425 -75135055 + MIR3 SINE MIR 13 162 -46 183 80 0 0 chr17 10303643 10303668 -75134812 + (CAA)n Simple_repeat Simple_repeat 2 26 0 502 255 26 63 chr17 10304637 10304863 -75133617 - MIR SINE MIR -20 242 26 717 144 4 43 chr17 10305166 10305441 -75133039 + (ATGGTG)n Simple_repeat Simple_repeat 1 264 0 770 168 6 0 chr17 10305459 10305557 -75132923 + (ATG)n Simple_repeat Simple_repeat 3 164 0 408 111 0 0 chr17 10305557 10305620 -75132860 + (ATG)n Simple_repeat Simple_repeat 3 65 0 188 188 0 0 chr17 10305815 10305847 -75132633 + MIR SINE MIR 207 238 -24 746 195 43 16 chr17 10305880 10306065 -75132415 - L1MB8 LINE L1 -1 6177 5988 459 298 21 21 chr17 10306083 10306224 -75132256 - MIR SINE MIR -108 154 14 310 295 27 55 chr17 10306233 10306348 -75132132 - MIR SINE MIR -67 141 30 252 299 165 16 chr17 10306792 10306919 -75131561 + MIR3 SINE MIR 4 149 -59 186 133 0 0 chr17 10306997 10307027 -75131453 + (TTCC)n Simple_repeat Simple_repeat 3 32 0 1804 191 23 29 chr17 10307038 10307544 -75130936 - L1MA9 LINE L1 -12 6172 5667 233 143 0 20 chr17 10307549 10307598 -75130882 + (TA)n Simple_repeat Simple_repeat 1 48 0 1699 121 60 93 chr17 10307598 10307730 -75130750 - L1M3 LINE L1 -541 5793 5658 2975 13 0 0 chr17 10307730 10308048 -75130432 + AluYb8 SINE Alu 1 318 0 1699 121 60 93 chr17 10308048 10308279 -75130201 - L1M3 LINE L1 -676 5658 5442 291 161 0 16 chr17 10310101 10310163 -75128317 - MER103 DNA DNA -87 79 19 215 330 21 0 chr17 10310334 10310431 -75128049 + (GGGTG)n Simple_repeat Simple_repeat 2 100 0 5261 64 18 0 chr17 10311210 10311886 -75126594 + L1PA7 LINE L1 5463 6150 -4 211 279 158 63 chr17 10312252 10312410 -75126070 + MIR SINE MIR 87 259 -3 224 222 37 0 chr17 10313178 10313232 -75125248 + CT-rich Low_complexity Low_complexity 3 58 0 441 0 0 0 chr17 10313833 10313882 -75124598 + (TG)n Simple_repeat Simple_repeat 2 50 0 229 301 68 8 chr17 10314356 10314489 -75123991 - MER117 DNA MER1_type -56 141 1 390 298 68 58 chr17 10315101 10315655 -75122825 + L1ME4a LINE L1 5287 5849 -272 2235 93 7 17 chr17 10315655 10315956 -75122524 + AluSx SINE Alu 1 298 -14 390 298 68 58 chr17 10315956 10316006 -75122474 + L1ME4a LINE L1 5849 5897 -224 24 32 0 0 chr17 10316024 10316055 -75122425 + AT_rich Low_complexity Low_complexity 1 31 0 538 162 152 0 chr17 10316056 10316161 -75122319 - FLAM_C SINE Alu -2 141 21 23 0 0 0 chr17 10316161 10316184 -75122296 + AT_rich Low_complexity Low_complexity 1 23 0 24 32 0 0 chr17 10316286 10316317 -75122163 + AT_rich Low_complexity Low_complexity 1 31 0 832 187 19 0 chr17 10316326 10316481 -75121999 - FRAM SINE Alu -2 174 17 25 0 0 0 chr17 10317534 10317559 -75120921 + AT_rich Low_complexity Low_complexity 1 25 0 820 124 31 16 chr17 10317559 10317688 -75120792 - FLAM_C SINE Alu 0 133 3 2256 112 3 7 chr17 10317700 10318005 -75120475 - AluSx SINE Alu -8 304 1 255 268 71 62 chr17 10318007 10318119 -75120361 - MIR SINE MIR -98 164 52 413 350 7 0 chr17 10319121 10319258 -75119222 - MIR3 SINE MIR -4 204 67 1497 248 76 11 chr17 10321043 10321515 -75116965 + MER113 DNA MER1_type? 6 508 -13 2272 102 17 0 chr17 10321750 10322043 -75116437 + AluSp SINE Alu 1 298 -15 291 250 140 30 chr17 10322387 10322487 -75115993 - L2 LINE L2 -23 3249 3139 2083 120 7 13 chr17 10322906 10323206 -75115274 - AluSg1 SINE Alu -11 298 1 2431 88 0 0 chr17 10323791 10324085 -75114395 + AluSq SINE Alu 1 294 -19 303 180 49 0 chr17 10325294 10325355 -75113125 + MER69 DNA AcHobo 1 64 -1162 255 143 155 24 chr17 10325486 10325570 -75112910 + MER69 DNA AcHobo 2389 2483 -43 2204 91 0 0 chr17 10325572 10325847 -75112633 + AluSq SINE Alu 1 275 -38 1971 190 52 0 chr17 10325892 10326239 -75112241 + MLT1A1 LTR MaLR 1 365 0 1976 103 0 0 chr17 10326887 10327139 -75111341 + AluSx SINE Alu 49 300 -12 262 203 0 17 chr17 10327163 10327222 -75111258 + L1ME LINE L1 5725 5782 -380 407 299 30 48 chr17 10328903 10329070 -75109410 - MIR SINE MIR -89 173 10 2344 98 0 22 chr17 10329724 10330039 -75108441 + AluSc SINE Alu 2 309 0 183 184 0 82 chr17 10330073 10330122 -75108358 - L2 LINE L2 -190 3082 3038 2630 59 0 0 chr17 10330240 10330545 -75107935 - AluY SINE Alu -6 305 1 473 352 26 11 chr17 10330619 10330883 -75107597 - L1ME LINE L1 -352 5818 5551 2301 82 10 26 chr17 10331101 10331446 -75107034 + AluSx SINE Alu 14 353 0 230 287 0 35 chr17 10331987 10332065 -75106415 + (CA)n Simple_repeat Simple_repeat 1 77 -7 2047 122 3 7 chr17 10332065 10332359 -75106121 - AluSx SINE Alu -19 293 1 230 287 0 35 chr17 10332359 10332367 -75106113 + (CA)n Simple_repeat Simple_repeat 77 84 0 216 0 0 0 chr17 10332369 10332393 -75106087 + (T)n Simple_repeat Simple_repeat 1 24 0 1534 213 7 3 chr17 10332434 10332735 -75105745 - AluJo SINE Alu -10 302 1 23 0 0 0 chr17 10332934 10332957 -75105523 + AT_rich Low_complexity Low_complexity 1 23 0 840 183 0 0 chr17 10332960 10333091 -75105389 - FLAM_C SINE Alu -2 131 1 2413 61 0 0 chr17 10333280 10333587 -75104893 - AluSc SINE Alu 0 307 1 779 301 65 0 chr17 10333667 10333896 -75104584 - MIR SINE MIR -10 252 9 2339 102 0 25 chr17 10334074 10334389 -75104091 - AluSc SINE Alu -2 307 1 1739 153 0 67 chr17 10334434 10334602 -75103878 - AluJb SINE Alu -19 293 154 2898 13 0 0 chr17 10334602 10334913 -75103567 - AluYa5 SINE Alu 0 311 1 1739 153 0 67 chr17 10334913 10335058 -75103422 - AluJb SINE Alu -158 154 1 28 48 0 0 chr17 10335124 10335166 -75103314 + AT_rich Low_complexity Low_complexity 1 42 0 336 374 43 0 chr17 10335978 10336165 -75102315 + L2 LINE L2 1851 2045 -1269 2422 108 0 6 chr17 10336276 10336590 -75101890 - AluSx SINE Alu 0 312 1 2168 99 55 0 chr17 10337313 10337430 -75101050 + AluSx SINE Alu 1 110 -202 184 29 29 29 chr17 10337430 10337464 -75101016 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 2168 99 55 0 chr17 10337464 10337638 -75100842 + AluSx SINE Alu 110 308 -4 311 282 162 0 chr17 10337777 10337894 -75100586 + L2 LINE L2 3136 3271 -1 2215 112 3 0 chr17 10338348 10338676 -75099804 + AluSx SINE Alu 1 329 0 337 287 107 56 chr17 10338968 10339184 -75099296 + MIR SINE MIR 31 257 -5 806 193 30 6 chr17 10339185 10339351 -75099129 - FRAM SINE Alu -7 169 1 651 200 33 44 chr17 10340281 10340461 -75098019 + MER20 DNA MER1_type 42 219 0 2206 117 0 3 chr17 10341237 10341537 -75096943 + AluSq SINE Alu 1 299 -14 288 247 116 7 chr17 10341961 10342107 -75096373 + MER3 DNA MER1_type 48 209 0 2217 96 4 0 chr17 10342210 10342527 -75095953 + AluSx SINE Alu 1 318 0 235 325 0 12 chr17 10342527 10342610 -75095870 - MIR3 SINE MIR -7 201 120 560 224 105 28 chr17 10342611 10342703 -75095777 + MIR SINE MIR 51 159 -103 1780 140 101 3 chr17 10342703 10343031 -75095449 + MER46B DNA MER2_type 2 236 0 560 224 105 28 chr17 10343031 10343081 -75095399 + MIR SINE MIR 159 204 -58 2204 123 0 7 chr17 10343083 10343392 -75095088 + AluSx SINE Alu 1 307 -5 278 300 40 0 chr17 10343588 10343688 -75094792 + MER91A DNA MER1_type 93 196 0 198 172 259 0 chr17 10343688 10343746 -75094734 - MIR SINE MIR -77 131 59 2143 212 21 60 chr17 10344041 10344534 -75093946 + MER74A LTR ERVL 2 470 -88 2134 108 24 0 chr17 10344534 10344821 -75093659 - AluSx SINE Alu -16 296 3 2143 212 21 60 chr17 10344821 10344907 -75093573 + MER74A LTR ERVL 470 558 0 198 327 129 10 chr17 10345140 10345241 -75093239 + MIR3 SINE MIR 60 172 -36 2379 92 0 0 chr17 10345385 10345679 -75092801 + AluSc SINE Alu 1 294 -15 180 0 0 0 chr17 10346087 10346107 -75092373 + (TAA)n Simple_repeat Simple_repeat 3 22 0 468 269 0 0 chr17 10346107 10346211 -75092269 - MIR SINE MIR -2 260 157 2687 48 0 3 chr17 10346302 10346613 -75091867 - AluY SINE Alu -1 310 1 273 351 13 0 chr17 10346613 10346690 -75091790 - MIR SINE MIR -114 148 71 307 276 61 10 chr17 10347002 10347100 -75091380 + MIR SINE MIR 110 212 -50 669 142 39 113 chr17 10347285 10347458 -75091022 - MER53 DNA DNA 0 189 32 805 159 0 0 chr17 10347458 10347603 -75090877 - L1MA4 LINE L1 -6 6294 6150 669 142 39 113 chr17 10347603 10347633 -75090847 - MER53 DNA DNA -157 32 1 1964 129 57 0 chr17 10348133 10348413 -75090067 - AluSg SINE Alu -14 296 1 2180 128 0 28 chr17 10348643 10348963 -75089517 - AluSx SINE Alu 0 312 2 31 26 0 0 chr17 10349523 10349561 -75088919 + AT_rich Low_complexity Low_complexity 1 38 0 1459 202 69 0 chr17 10349662 10349824 -75088656 - AluJb SINE Alu -16 296 106 255 61 0 0 chr17 10349824 10349857 -75088623 + (TTTTA)n Simple_repeat Simple_repeat 1 33 0 1459 202 69 0 chr17 10349857 10349971 -75088509 - AluJb SINE Alu -206 106 1 2350 179 70 56 chr17 10349974 10350421 -75088059 + L1MB7 LINE L1 5557 5996 -188 2372 96 0 3 chr17 10350421 10350724 -75087756 + AluSc SINE Alu 1 302 -7 2350 179 70 56 chr17 10350724 10350817 -75087663 + L1MB7 LINE L1 5996 6109 -75 2031 139 7 7 chr17 10350817 10351112 -75087368 - AluSx SINE Alu -17 295 1 2350 179 70 56 chr17 10351112 10351180 -75087300 + L1MB7 LINE L1 6109 6175 -9 295 259 148 9 chr17 10351829 10351937 -75086543 + L2 LINE L2 3191 3313 0 230 234 258 8 chr17 10352010 10352138 -75086342 - MARNA DNA Mariner -17 569 410 2304 101 0 16 chr17 10352148 10352455 -75086025 + AluSg SINE Alu 1 302 -8 2589 78 0 0 chr17 10353325 10353634 -75084846 + AluSc SINE Alu 1 309 0 2175 118 17 0 chr17 10354700 10354988 -75083492 + AluSq SINE Alu 1 293 -20 2273 93 23 0 chr17 10355322 10355623 -75082857 - AluY SINE Alu -3 308 1 394 269 200 14 chr17 10355940 10356085 -75082395 + MIR SINE MIR 11 182 -80 571 86 0 21 chr17 10356598 10356691 -75081789 + (TTCCC)n Simple_repeat Simple_repeat 3 93 0 1958 148 23 7 chr17 10356707 10357012 -75081468 - AluSx SINE Alu -2 310 1 492 177 20 11 chr17 10357172 10357340 -75081140 + MLT1E1 LTR MaLR 1 231 -423 2213 116 0 3 chr17 10358552 10358853 -75079627 + AluSg SINE Alu 1 300 -10 196 284 90 0 chr17 10359045 10359112 -75079368 - MIR3 SINE MIR -10 198 126 300 230 0 4 chr17 10359802 10359906 -75078574 + MLT1E1 LTR MaLR 79 229 -425 2337 91 7 7 chr17 10359922 10360231 -75078249 + AluSg SINE Alu 1 309 -1 438 232 14 61 chr17 10360438 10360590 -75077890 + MER57A LTR ERV1 42 190 -244 886 173 81 132 chr17 10360619 10360914 -75077566 + MER57A LTR ERV1 124 403 0 2150 126 0 25 chr17 10361195 10361513 -75076967 + AluSx SINE Alu 1 310 -2 446 88 15 0 chr17 10361513 10361581 -75076899 + (GGAA)n Simple_repeat Simple_repeat 2 70 0 473 238 116 11 chr17 10361585 10361766 -75076714 + MIR SINE MIR 63 262 0 351 0 0 0 chr17 10363441 10363480 -75075000 + (T)n Simple_repeat Simple_repeat 1 39 0 2232 108 0 3 chr17 10364575 10364872 -75073608 - AluSx SINE Alu -14 298 3 821 232 11 21 chr17 10366026 10366091 -75072389 + MER5A DNA MER1_type 2 66 -123 1607 174 30 27 chr17 10366091 10366390 -75072090 + AluJo SINE Alu 2 301 -11 821 232 11 21 chr17 10366390 10366514 -75071966 + MER5A DNA MER1_type 66 189 0 197 268 28 14 chr17 10366531 10366602 -75071878 - MIR SINE MIR -91 117 46 3525 228 36 19 chr17 10366635 10367433 -75071047 + MER21B LTR ERV1 1 812 -51 783 255 109 40 chr17 10368061 10368259 -75070221 - MER113 DNA MER1_type? -169 352 120 2506 168 19 28 chr17 10368259 10368724 -75069756 + MLT1C LTR MaLR 5 465 -2 783 255 109 40 chr17 10368724 10368854 -75069626 - MER113 DNA MER1_type? -401 120 1 2311 96 0 7 chr17 10368905 10369206 -75069274 - AluSq SINE Alu -14 299 1 1189 36 0 0 chr17 10370812 10370949 -75067531 + AluY SINE Alu 166 302 -9 2048 94 11 7 chr17 10372484 10372779 -75065701 - AluSq SINE Alu 0 304 9 1001 158 33 0 chr17 10372997 10373180 -75065300 - MER5A DNA MER1_type 0 189 1 275 276 217 7 chr17 10373195 10373347 -75065133 + MER5A DNA MER1_type 6 189 0 456 62 0 0 chr17 10373453 10373517 -75064963 + (TG)n Simple_repeat Simple_repeat 2 65 0 239 309 21 0 chr17 10373796 10373890 -75064590 + CT-rich Low_complexity Low_complexity 4 99 0 201 133 0 0 chr17 10373932 10373962 -75064518 + (CA)n Simple_repeat Simple_repeat 1 30 0 2318 110 0 0 chr17 10373994 10374293 -75064187 - AluSx SINE Alu -13 299 1 5809 184 116 17 chr17 10374764 10374959 -75063521 - Charlie1a DNA MER1_type -1306 1455 1281 2270 116 0 0 chr17 10374959 10375261 -75063219 - AluSx SINE Alu -10 302 1 5809 184 116 17 chr17 10375261 10376388 -75062092 - Charlie1a DNA MER1_type -1480 1281 1 257 156 219 94 chr17 10376730 10376890 -75061590 - MER104 DNA Tc2 0 180 1 252 268 0 14 chr17 10376992 10377063 -75061417 - MER5A DNA MER1_type -88 101 32 247 233 53 47 chr17 10377067 10377217 -75061263 - MER113 DNA MER1_type? -370 151 1 789 313 168 6 chr17 10377452 10377982 -75060498 - L3 LINE CR1 -182 1395 780 301 296 23 0 chr17 10379879 10379967 -75058513 + MIR3 SINE MIR 108 197 -11 24 0 0 0 chr17 10381272 10381296 -75057184 + AT_rich Low_complexity Low_complexity 1 24 0 1769 129 0 104 chr17 10381296 10381613 -75056867 - AluSx SINE Alu -18 284 1 753 85 0 0 chr17 10382106 10382212 -75056268 + (TTCC)n Simple_repeat Simple_repeat 4 109 0 2349 87 3 0 chr17 10382217 10382516 -75055964 - AluSp SINE Alu 0 313 14 471 287 0 18 chr17 10382588 10382755 -75055725 - MER103 DNA DNA -1 165 2 227 125 0 104 chr17 10382898 10382946 -75055534 + L2 LINE L2 3230 3272 0 2078 143 0 10 chr17 10383065 10383379 -75055101 + AluSx SINE Alu 1 311 -1 540 299 103 0 chr17 10383416 10383590 -75054890 - MIR SINE MIR -54 208 17 200 248 133 26 chr17 10383617 10383730 -75054750 - L2 LINE L2 -25 3247 3123 22 35 0 0 chr17 10383968 10383997 -75054483 + AT_rich Low_complexity Low_complexity 1 29 0 403 317 21 14 chr17 10384028 10384179 -75054301 - MIR SINE MIR -73 135 7 306 106 0 0 chr17 10384481 10384528 -75053952 + (CA)n Simple_repeat Simple_repeat 2 48 0 2253 117 0 3 chr17 10384957 10385256 -75053224 + AluSx SINE Alu 1 298 -14 2560 60 0 22 chr17 10385395 10385709 -75052771 + AluY SINE Alu 1 307 -4 761 129 129 0 chr17 10386969 10387109 -75051371 - L1MA10 LINE L1 0 6334 6177 344 305 67 0 chr17 10388157 10388262 -75050218 - MIR SINE MIR -67 141 30 619 281 47 10 chr17 10388713 10388905 -75049575 + MIR SINE MIR 6 204 -58 327 284 86 0 chr17 10389254 10389335 -75049145 + MER81 DNA DNA 4 91 -23 612 134 0 0 chr17 10389446 10389543 -75048937 - AluSc SINE Alu 0 309 213 232 263 200 0 chr17 10389708 10389788 -75048692 - L2 LINE L2 0 3313 3218 471 267 159 4 chr17 10389861 10390097 -75048383 - L2 LINE L2 -262 3051 2770 674 51 19 10 chr17 10390366 10390623 -75047857 + AluSp SINE Alu 2 308 -5 2544 59 3 0 chr17 10391095 10391398 -75047082 - AluSq SINE Alu -9 304 1 682 273 65 29 chr17 10392299 10392347 -75046133 - L1ME4a LINE L1 -126 5995 5950 1664 114 0 4 chr17 10392347 10392584 -75045896 - AluSc SINE Alu -1 308 73 2308 95 7 0 chr17 10392585 10392880 -75045600 - AluSc SINE Alu -12 297 1 682 273 65 29 chr17 10392880 10393213 -75045267 - L1ME4a LINE L1 -170 5951 5598 2062 116 36 13 chr17 10393768 10394070 -75044410 + AluSc SINE Alu 1 309 0 770 239 46 35 chr17 10394089 10394191 -75044289 + L1M4 LINE L1 4317 4416 -1730 2423 92 0 0 chr17 10394191 10394494 -75043986 + AluSg SINE Alu 1 303 -7 770 239 46 35 chr17 10394494 10394675 -75043805 + L1M4 LINE L1 4416 4603 -1543 2658 218 83 42 chr17 10394777 10395883 -75042597 - L1ME1 LINE L1 -5 6161 5017 214 288 15 61 chr17 10396194 10396326 -75042154 + L2 LINE L2 2474 2599 -715 1991 132 0 32 chr17 10396353 10396664 -75041816 - AluJb SINE Alu -7 305 5 1286 260 58 31 chr17 10396668 10397146 -75041334 + L2 LINE L2 2589 3090 -223 2557 44 0 0 chr17 10397146 10397440 -75041040 + AluY SINE Alu 1 294 -17 1286 260 58 31 chr17 10397440 10397671 -75040809 + L2 LINE L2 3090 3313 0 2025 138 0 0 chr17 10399010 10399313 -75039167 + AluSx SINE Alu 1 303 0 394 288 121 0 chr17 10399829 10399961 -75038519 - MIR SINE MIR -109 153 6 423 239 52 58 chr17 10401284 10401439 -75037041 + MER20B DNA MER1_type 1 154 -629 261 0 0 0 chr17 10401604 10401633 -75036847 + (T)n Simple_repeat Simple_repeat 1 29 0 222 273 15 15 chr17 10402233 10402299 -75036181 + MIR SINE MIR 40 105 -103 682 301 64 4 chr17 10402308 10402544 -75035936 - MIR SINE MIR -12 250 1 26 30 0 0 chr17 10403277 10403310 -75035170 + AT_rich Low_complexity Low_complexity 1 33 0 260 208 145 38 chr17 10403412 10403571 -75034909 - L1ME4a LINE L1 0 6121 5946 444 271 231 8 chr17 10403627 10403878 -75034602 - L1ME4a LINE L1 -281 5840 5534 2141 86 22 59 chr17 10404682 10405006 -75033474 - AluSx SINE Alu 0 312 1 597 298 28 32 chr17 10405731 10405979 -75032501 + MIR SINE MIR 13 259 -3 381 162 0 0 chr17 10406563 10406631 -75031849 + (TA)n Simple_repeat Simple_repeat 1 68 0 1498 138 17 4 chr17 10406631 10406862 -75031618 - MER46A DNA MER2_type 0 236 3 227 53 0 26 chr17 10406862 10406900 -75031580 + (TG)n Simple_repeat Simple_repeat 2 38 0 2462 47 0 24 chr17 10407534 10407832 -75030648 + AluY SINE Alu 1 291 -20 407 319 76 32 chr17 10409655 10409840 -75028640 + MIR3 SINE MIR 15 207 -1 663 224 72 105 chr17 10410088 10410449 -75028031 - L1MC4 LINE L1 -1 8041 7693 21 0 0 0 chr17 10411101 10411122 -75027358 + AT_rich Low_complexity Low_complexity 1 21 0 252 86 0 0 chr17 10412339 10412374 -75026106 + (CA)n Simple_repeat Simple_repeat 2 36 0 194 300 210 0 chr17 10414914 10415014 -75023466 + MIR3 SINE MIR 65 185 -23 2035 129 0 0 chr17 10415171 10415485 -75022995 + AluSg SINE Alu 1 314 0 2263 105 7 0 chr17 10415556 10415851 -75022629 - AluSg SINE Alu -13 297 1 686 306 53 20 chr17 10416131 10416432 -75022048 + MARNA DNA Mariner 185 495 -91 1934 149 4 0 chr17 10417634 10417941 -75020539 + AluJb SINE Alu 1 308 0 24 32 0 0 chr17 10418027 10418058 -75020422 + AT_rich Low_complexity Low_complexity 1 31 0 2244 97 0 7 chr17 10418707 10419006 -75019474 + AluSc SINE Alu 1 297 -12 243 351 117 7 chr17 10419433 10419587 -75018893 - MIR3 SINE MIR -23 185 15 356 313 108 5 chr17 10419625 10419820 -75018660 + MIR SINE MIR 48 262 0 189 281 247 48 chr17 10420690 10420836 -75017644 + MIR3 SINE MIR 21 195 -13 4302 149 8 4 chr17 10423540 10424272 -75014208 - L1MB3 LINE L1 -2 6181 5447 703 206 37 16 chr17 10424300 10424489 -75013991 - L1MC5 LINE L1 -44 7917 7725 430 326 0 35 chr17 10424489 10424630 -75013850 - MIR3 SINE MIR -6 202 67 299 239 11 43 chr17 10425994 10426086 -75012394 + MIR SINE MIR 59 147 -61 2255 110 0 0 chr17 10426670 10426970 -75011510 - AluSq SINE Alu -13 300 1 22 0 0 0 chr17 10428880 10428902 -75009578 + AT_rich Low_complexity Low_complexity 1 22 0 24 32 0 0 chr17 10430291 10430322 -75008158 + AT_rich Low_complexity Low_complexity 1 31 0 392 112 21 5 chr17 10430332 10430413 -75008067 - L1ME1 LINE L1 0 6184 6096 340 226 8 25 chr17 10430420 10430542 -75007938 - L1MD2 LINE L1 -26 6140 6040 23 54 0 0 chr17 10430796 10430833 -75007647 + AT_rich Low_complexity Low_complexity 1 37 0 601 191 33 33 chr17 10430913 10431065 -75007415 - L1MC5 LINE L1 -40 7921 7770 409 318 22 19 chr17 10431556 10431871 -75006609 - L1M4 LINE L1 -1490 4656 4341 299 224 13 26 chr17 10431963 10432039 -75006441 + MLT1J LTR MaLR 127 201 -310 330 284 90 15 chr17 10432316 10432517 -75005963 - L1M4 LINE L1 -1823 4323 4108 2683 161 30 34 chr17 10432695 10433229 -75005251 + L1MB7 LINE L1 5630 6161 -23 460 318 75 29 chr17 10433235 10433782 -75004698 - L1M4 LINE L1 -2202 3944 3373 246 251 0 62 chr17 10433850 10434029 -75004451 + T-rich Low_complexity Low_complexity 4 171 0 628 243 68 0 chr17 10434392 10434614 -75003866 - L1ME3A LINE L1 -215 5955 5719 1132 247 15 10 chr17 10434738 10435057 -75003423 - L1ME1 LINE L1 -5 6161 5841 824 214 48 24 chr17 10435186 10435434 -75003046 - L1ME1 LINE L1 -306 5860 5607 357 305 107 10 chr17 10435576 10436065 -75002415 + L1MC/D LINE L1 4724 5324 -846 477 0 0 0 chr17 10436065 10436118 -75002362 + (CA)n Simple_repeat Simple_repeat 2 54 0 357 305 107 10 chr17 10436118 10436375 -75002105 + L1MC/D LINE L1 5324 5555 -615 227 350 0 8 chr17 10437179 10437196 -75001284 - L1P4 LINE L1 -285 5878 5862 2489 231 120 25 chr17 10437196 10438401 -75000079 - L1MC4 LINE L1 -454 5708 4506 1008 232 23 26 chr17 10438403 10438713 -74999767 - L1MC4 LINE L1 -2057 4089 3781 2198 157 12 0 chr17 10438752 10439089 -74999391 + MER7A DNA MER2_type 8 346 0 354 189 81 0 chr17 10439100 10439174 -74999306 - L1M4c LINE L1 -2377 4580 4501 * 3779 210 41 33 chr17 10439165 10440294 -74998186 - L1M4c LINE L1 -2959 3998 2888 676 191 0 28 chr17 10440342 10440483 -74997997 - FLAM_C SINE Alu -2 141 5 388 268 56 82 chr17 10440496 10440727 -74997753 - L1M4c LINE L1 -4315 2823 2599 5391 257 63 39 chr17 10440784 10441129 -74997351 - L1M4c LINE L1 -4463 2675 2340 423 0 0 0 chr17 10441129 10441176 -74997304 + (TG)n Simple_repeat Simple_repeat 2 48 0 5391 257 63 39 chr17 10441176 10442095 -74996385 - L1M4c LINE L1 -4798 2340 1444 1282 167 0 12 chr17 10442095 10442341 -74996139 - L1MA4A LINE L1 -1 6302 6060 5391 257 63 39 chr17 10442341 10443554 -74994926 - L1M4c LINE L1 -5694 1444 1 5400 204 95 56 chr17 10443567 10444912 -74993568 - L1MDa LINE L1 -4149 2391 790 2327 126 25 3 chr17 10444912 10445268 -74993212 + THE1B LTR MaLR 1 364 0 5400 204 95 56 chr17 10445268 10445927 -74992553 - L1MDa LINE L1 -5750 790 158 1881 119 54 110 chr17 10445927 10446429 -74992051 - THE1C LTR MaLR 0 428 1 779 172 28 7 chr17 10446429 10446574 -74991906 - L1MDa LINE L1 -6378 162 15 1175 228 69 27 chr17 10446706 10447040 -74991440 - L2 LINE L2 0 3313 2966 212 324 165 23 chr17 10447182 10447358 -74991122 + MIR SINE MIR 61 261 -1 267 239 28 42 chr17 10447416 10447487 -74990993 - MIR3 SINE MIR -35 173 104 976 166 55 22 chr17 10447566 10447747 -74990733 + MER5A DNA MER1_type 3 189 0 2534 51 0 6 chr17 10448284 10448595 -74989885 - AluY SINE Alu -2 309 1 204 327 37 19 chr17 10450076 10450183 -74988297 + L2 LINE L2 2584 2692 -622 358 292 87 102 chr17 10450349 10450681 -74987799 + L2 LINE L2 2941 3267 -5 2142 117 30 3 chr17 10451253 10451551 -74986929 + AluSq SINE Alu 3 308 -5 283 229 33 16 chr17 10451859 10451920 -74986560 + MER69 DNA AcHobo 4 65 -112 497 191 167 0 chr17 10452059 10452185 -74986295 + MER69 DNA AcHobo 2380 2526 0 2570 62 0 0 chr17 10453359 10453665 -74984815 + AluY SINE Alu 1 306 -5 22 35 0 0 chr17 10453773 10453802 -74984678 + AT_rich Low_complexity Low_complexity 1 29 0 333 255 124 0 chr17 10454010 10454155 -74984325 - L1ME4a LINE L1 -204 5917 5755 273 362 0 9 chr17 10455061 10455177 -74983303 - MIR3 SINE MIR -13 195 81 367 338 60 15 chr17 10457156 10457289 -74981191 - MIR3 SINE MIR 0 208 70 21 0 0 0 chr17 10461183 10461204 -74977276 + AT_rich Low_complexity Low_complexity 1 21 0 288 350 25 17 chr17 10461712 10461832 -74976648 + MIR3 SINE MIR 38 158 -50 420 272 24 8 chr17 10464757 10464882 -74973598 + MIR3 SINE MIR 81 207 -1 2478 137 29 12 chr17 10471627 10472042 -74966438 - L1PA16 LINE L1 -11 6155 5734 2852 7 0 0 chr17 10473377 10473686 -74964794 - AluYa5 SINE Alu -2 309 1 23 0 0 0 chr17 10475166 10475189 -74963291 + AT_rich Low_complexity Low_complexity 1 23 0 419 301 23 29 chr17 10476291 10476464 -74962016 - MIR3 SINE MIR -9 199 28 190 314 47 12 chr17 10476493 10476579 -74961901 - MIR SINE MIR -142 120 32 23 54 0 0 chr17 10479383 10479420 -74959060 + AT_rich Low_complexity Low_complexity 1 37 0 1389 270 92 28 chr17 10479666 10480051 -74958429 - L2 LINE L2 0 3313 2954 2402 128 35 29 chr17 10480051 10480506 -74957974 + L1MA8 LINE L1 5831 6288 -3 1389 270 92 28 chr17 10480506 10480816 -74957664 - L2 LINE L2 -359 2954 2583 570 231 104 6 chr17 10480818 10481000 -74957480 - MLT1G LTR MaLR 0 590 391 1467 294 71 62 chr17 10481034 10481938 -74956542 - L2 LINE L2 -1541 1773 862 1320 254 35 0 chr17 10481940 10482314 -74956166 - L1M4 LINE L1 -2333 3813 3427 211 267 27 27 chr17 10482325 10482400 -74956080 - L2 LINE L2 -2448 866 792 332 296 159 56 chr17 10482665 10482935 -74955545 - L2 LINE L2 -67 3246 2949 591 303 32 23 chr17 10482973 10483191 -74955289 - MIR SINE MIR -18 244 25 405 167 0 0 chr17 10483203 10483281 -74955199 + CT-rich Low_complexity Low_complexity 3 80 0 1896 149 7 3 chr17 10483283 10483571 -74954909 - AluSx SINE Alu -21 291 3 253 184 41 0 chr17 10483589 10483638 -74954842 + L3 LINE CR1 1527 1577 0 263 237 36 65 chr17 10485084 10485223 -74953257 + (ATAGG)n Simple_repeat Simple_repeat 4 138 0 266 265 16 65 chr17 10485428 10485613 -74952867 + (ATAAG)n Simple_repeat Simple_repeat 2 177 0 244 326 54 31 chr17 10486045 10486174 -74952306 - L2 LINE L2 0 3313 3182 2041 299 129 40 chr17 10486306 10487498 -74950982 - L2 LINE L2 -529 2785 1488 23 33 0 0 chr17 10487587 10487617 -74950863 + AT_rich Low_complexity Low_complexity 1 30 0 482 120 100 0 chr17 10487617 10487717 -74950763 - L1MA9 LINE L1 -22 7709 7600 8345 228 36 73 chr17 10487720 10488558 -74949922 - L1MA9 LINE L1 -231 7500 6633 2799 91 8 3 chr17 10488558 10488931 -74949549 - THE1C LTR MaLR 0 375 1 9749 110 31 57 chr17 10488931 10490553 -74947927 - THE1C-int LTR MaLR 0 1580 1 2608 106 19 3 chr17 10490553 10490922 -74947558 - THE1C LTR MaLR 0 375 1 8345 228 36 73 chr17 10490922 10491388 -74947092 - L1MA9 LINE L1 -1096 6635 6153 1550 119 91 163 chr17 10491388 10491849 -74946631 - THE1C LTR MaLR 0 428 1 8345 228 36 73 chr17 10491849 10492188 -74946292 - L1MA9 LINE L1 -1578 6153 5803 2151 136 87 8 chr17 10492188 10492579 -74945901 - MSTA LTR MaLR 0 428 7 5519 131 38 46 chr17 10492579 10493659 -74944821 - MER11C LTR ERVK 0 1071 1 8345 228 36 73 chr17 10493659 10496398 -74942082 - L1MA9 LINE L1 -1926 5805 3033 1232 178 160 53 chr17 10496400 10496826 -74941654 - AluSx SINE Alu 0 456 1 2415 243 42 15 chr17 10496826 10497810 -74940670 - L1M2 LINE L1 -4194 2655 1646 615 330 137 33 chr17 10497812 10498549 -74939931 - L2 LINE L2 -2185 1129 316 23 0 0 0 chr17 10500319 10500342 -74938138 + AT_rich Low_complexity Low_complexity 1 23 0 216 86 0 0 chr17 10500455 10500490 -74937990 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 242 297 168 40 chr17 10500794 10500895 -74937585 - MIR3 SINE MIR -6 202 89 1121 293 165 25 chr17 10501167 10501802 -74936678 + L2 LINE L2 2250 2973 -341 2518 50 0 0 chr17 10503092 10503389 -74935091 + AluY SINE Alu 1 297 -14 21 0 0 0 chr17 10503431 10503452 -74935028 + AT_rich Low_complexity Low_complexity 1 21 0 276 305 76 0 chr17 10504424 10504529 -74933951 + L2 LINE L2 3167 3279 -34 23 33 0 0 chr17 10507374 10507404 -74931076 + AT_rich Low_complexity Low_complexity 1 30 0 191 254 169 51 chr17 10507740 10507858 -74930622 + MIR SINE MIR 90 221 -41 328 235 140 29 chr17 10507971 10508107 -74930373 + L1MC4 LINE L1 6609 6759 -1283 21 36 0 0 chr17 10510311 10510339 -74928141 + AT_rich Low_complexity Low_complexity 1 28 0 2392 110 0 0 chr17 10514095 10514405 -74924075 - AluSx SINE Alu -2 310 1 2149 135 3 0 chr17 10514678 10514975 -74923505 - AluSx SINE Alu -14 298 1 2286 92 30 3 chr17 10515619 10515924 -74922556 - AluSq SINE Alu 0 313 1 362 321 28 0 chr17 10516427 10516536 -74921944 - L2 LINE L2 -2 3311 3200 414 335 71 33 chr17 10516562 10516744 -74921736 + MER5A DNA MER1_type 1 189 0 1821 69 118 0 chr17 10517499 10517761 -74920719 + L1PA13 LINE L1 5852 6144 -19 673 320 74 4 chr17 10517909 10518140 -74920340 - MIR SINE MIR -3 259 13 1288 178 109 0 chr17 10518264 10518567 -74919913 + L1MB7 LINE L1 5849 6184 0 331 221 0 18 chr17 10519224 10519296 -74919184 - MIR SINE MIR -119 89 20 182 355 0 0 chr17 10521917 10521979 -74916501 - L2 LINE L2 -5 3267 3206 239 341 182 18 chr17 10523323 10523493 -74914987 + MIR3 SINE MIR 2 199 -9 264 289 62 39 chr17 10524658 10524786 -74913694 + L2 LINE L2 3137 3267 -5 204 179 0 0 chr17 10525303 10525342 -74913138 + (TG)n Simple_repeat Simple_repeat 2 40 0 210 71 0 0 chr17 10526596 10526624 -74911856 + (T)n Simple_repeat Simple_repeat 1 28 0 23 33 0 0 chr17 10527001 10527031 -74911449 + AT_rich Low_complexity Low_complexity 1 30 0 370 274 158 20 chr17 10527231 10527377 -74911103 - MIR3 SINE MIR -41 167 2 240 163 0 0 chr17 10529195 10529238 -74909242 + (CATA)n Simple_repeat Simple_repeat 2 44 0 235 326 7 7 chr17 10529641 10529779 -74908701 - L1 LINE L1 -2417 3729 3592 604 315 106 58 chr17 10529852 10530522 -74907958 - L1 LINE L1 -2709 3437 2736 887 260 166 19 chr17 10533602 10533975 -74904505 - L2 LINE L2 -1 3312 2885 349 312 43 0 chr17 10533989 10534130 -74904350 + L2 LINE L2 3161 3307 -6 1407 94 0 16 chr17 10535646 10535838 -74902642 - AluSc SINE Alu -1 308 120 284 337 20 92 chr17 10536039 10536235 -74902245 + MIR SINE MIR 29 210 -52 186 333 0 0 chr17 10537992 10538055 -74900425 - L2 LINE L2 -219 3053 2991 958 215 0 31 chr17 10539681 10539876 -74898604 - MER5A DNA MER1_type 0 189 1 252 260 23 68 chr17 10540128 10540305 -74898175 - MER112 DNA MER1_type -61 199 31 621 238 19 31 chr17 10541960 10542120 -74896360 + MIR SINE MIR 59 216 -46 22 35 0 0 chr17 10542210 10542239 -74896241 + AT_rich Low_complexity Low_complexity 1 29 0 2211 117 0 0 chr17 10542247 10542538 -74895942 + AluSx SINE Alu 1 291 -21 990 40 8 0 chr17 10543810 10543935 -74894545 + L1PB1 LINE L1 6025 6150 -1 2225 59 0 15 chr17 10546003 10546273 -74892207 + AluY SINE Alu 32 297 -14 229 228 193 9 chr17 10546274 10546388 -74892092 + L1ME4a LINE L1 5987 6121 0 6672 113 19 29 chr17 10548397 10549479 -74889001 + MER11C LTR ERVK 1 1071 0 1980 128 3 3 chr17 10549604 10549912 -74888568 + AluSx SINE Alu 1 308 0 631 249 72 37 chr17 10549949 10550350 -74888130 + L1ME4a LINE L1 5691 6105 -16 22 0 0 0 chr17 10550801 10550823 -74887657 + AT_rich Low_complexity Low_complexity 1 22 0 625 103 48 40 chr17 10550966 10551092 -74887388 + L1MA7 LINE L1 6165 6291 0 204 163 0 0 chr17 10552602 10552645 -74885835 + (TG)n Simple_repeat Simple_repeat 2 44 0 1347 158 0 14 chr17 10553188 10553403 -74885077 - AluJb SINE Alu -23 289 78 303 28 0 0 chr17 10553869 10553905 -74884575 + (TA)n Simple_repeat Simple_repeat 2 37 0 407 332 71 42 chr17 10554076 10554314 -74884166 - L2 LINE L2 -5 3267 3023 2057 113 0 36 chr17 10554410 10554712 -74883768 + AluSx SINE Alu 1 291 -21 345 307 20 0 chr17 10555806 10555907 -74882573 + MIR SINE MIR 44 146 -62 2318 91 0 3 chr17 10559228 10559526 -74878954 - AluY SINE Alu -14 297 1 525 212 123 47 chr17 10560312 10560482 -74877998 + MIR SINE MIR 47 229 -33 1533 109 0 0 chr17 10560866 10561067 -74877413 + AluSq SINE Alu 1 201 -112 22 0 0 0 chr17 10561067 10561089 -74877391 + AT_rich Low_complexity Low_complexity 1 22 0 7095 18 1 0 chr17 10561089 10561888 -74876592 - L1PA4 LINE L1 -3 6152 5353 776 93 9 19 chr17 10561888 10561996 -74876484 + AluSc SINE Alu 189 295 -14 230 224 24 12 chr17 10562630 10562715 -74875765 + (TA)n Simple_repeat Simple_repeat 2 87 0 278 293 37 70 chr17 10563856 10564071 -74874409 - L2 LINE L2 -215 3057 2850 863 138 23 8 chr17 10564539 10564669 -74873811 + AluJo SINE Alu 5 136 -176 260 164 87 135 chr17 10566113 10566171 -74872309 - Charlie4 DNA MER1_type -1692 269 217 2019 125 7 10 chr17 10566171 10566459 -74872021 + AluSx SINE Alu 13 299 -13 260 164 87 135 chr17 10566459 10566504 -74871976 - Charlie4 DNA MER1_type -1744 217 171 256 135 39 19 chr17 10566504 10566556 -74871924 + MLT2B1 LTR ERVL 1 53 -467 292 152 0 0 chr17 10566577 10566623 -74871857 + MLT2C1 LTR ERVL 350 395 -2 372 164 15 0 chr17 10566625 10566692 -74871788 - Charlie4 DNA MER1_type -1786 175 108 245 254 60 15 chr17 10566996 10567062 -74871418 + MER5B DNA MER1_type 1 69 -109 775 196 137 12 chr17 10567062 10567230 -74871250 + MER5A DNA MER1_type 1 189 0 347 322 9 9 chr17 10567301 10567416 -74871064 + L2 LINE L2 3198 3312 -1 2062 110 31 0 chr17 10567690 10567982 -74870498 - AluSq SINE Alu -12 301 1 201 297 139 59 chr17 10568366 10568568 -74869912 + L2 LINE L2 3093 3310 -3 2389 87 0 0 chr17 10568627 10568926 -74869554 + AluSg SINE Alu 2 300 -10 221 271 24 59 chr17 10568978 10569063 -74869417 + MIR SINE MIR 31 112 -150 1580 253 56 3 chr17 10569953 10570329 -74868151 + MSTD LTR MaLR 1 396 0 230 109 0 22 chr17 10570387 10570433 -74868047 - LTR66 LTR ERVL -175 435 391 4538 118 69 12 chr17 10570478 10571227 -74867253 - Tigger3(Golem) DNA MER2_type -1 3028 2237 614 128 24 128 chr17 10571222 10571268 -74867212 - Tigger3(Golem) DNA MER2_type -490 112 63 * 2192 96 0 57 chr17 10571268 10571582 -74866898 - AluSg SINE Alu -14 296 1 614 128 24 128 chr17 10571582 10571660 -74866820 - Tigger3(Golem) DNA MER2_type -539 63 1 1949 87 0 0 chr17 10572725 10572966 -74865514 + AluSq SINE Alu 1 241 -72 2458 212 56 18 chr17 10573006 10573611 -74864869 - L1ME1 LINE L1 -285 5881 5225 1092 196 0 6 chr17 10573611 10573790 -74864690 + MER45A DNA AcHobo 1 178 0 2458 212 56 18 chr17 10573790 10574050 -74864430 - L1ME1 LINE L1 -941 5225 4976 391 292 60 11 chr17 10574072 10574339 -74864141 - L1ME1 LINE L1 -1535 4611 4332 312 294 77 41 chr17 10574698 10574868 -74863612 - MLT1L LTR MaLR -2 613 438 2559 185 47 4 chr17 10574876 10575384 -74863096 - L1MD3 LINE L1 0 7995 7466 892 204 75 35 chr17 10575430 10575685 -74862795 - L1MC5 LINE L1 -36 7925 7661 316 318 45 68 chr17 10575703 10575967 -74862513 - MLT1J LTR MaLR -154 357 100 1925 117 7 21 chr17 10576347 10576629 -74861851 + AluSx SINE Alu 1 278 -34 653 215 7 0 chr17 10576833 10576968 -74861512 - MER104 DNA Tc2 -44 136 1 797 266 66 11 chr17 10577024 10577295 -74861185 - L1ME3 LINE L1 0 6164 5879 229 185 25 62 chr17 10577307 10577388 -74861092 + L1MC/D LINE L1 5853 5930 -1878 473 216 123 112 chr17 10577469 10577738 -74860742 + L2 LINE L2 3042 3313 0 2380 231 56 31 chr17 10577803 10578153 -74860327 - L1ME2 LINE L1 -70 6235 5895 2274 97 0 3 chr17 10578153 10578453 -74860027 + AluSx SINE Alu 1 299 -13 2380 231 56 31 chr17 10578453 10578918 -74859562 - L1ME2 LINE L1 -410 5895 5315 597 94 0 0 chr17 10578924 10579009 -74859471 + (TA)n Simple_repeat Simple_repeat 2 86 0 317 276 92 0 chr17 10579215 10579313 -74859167 - MIR SINE MIR -138 124 18 1522 166 92 142 chr17 10579521 10579962 -74858518 + LTR49 LTR ERV1 5 408 -187 2443 40 7 3 chr17 10579962 10580258 -74858222 + AluY SINE Alu 1 297 -14 1522 166 92 142 chr17 10580258 10580438 -74858042 + LTR49 LTR ERV1 408 595 0 727 273 151 61 chr17 10580915 10581175 -74857305 - MLT1K LTR MaLR -108 480 174 954 156 44 0 chr17 10581175 10581355 -74857125 - MER53 DNA DNA 0 189 2 727 273 151 61 chr17 10581355 10581472 -74857008 - MLT1K LTR MaLR -414 174 69 1726 158 103 41 chr17 10582107 10582415 -74856065 - MLT2D LTR ERVL -2 518 82 1861 140 13 13 chr17 10582415 10582715 -74855765 + AluJo SINE Alu 1 300 -12 1726 158 103 41 chr17 10582715 10582803 -74855677 - MLT2D LTR ERVL -438 82 1 1648 198 0 22 chr17 10583111 10583430 -74855050 + AluJo SINE Alu 1 312 0 2482 82 0 0 chr17 10584502 10584808 -74853672 - AluY SINE Alu -5 306 1 202 295 82 0 chr17 10584849 10584910 -74853570 - L3 LINE CR1 -4 1573 1508 582 104 125 0 chr17 10584923 10585019 -74853461 - L1MC2 LINE L1 -187 6157 6050 350 284 10 0 chr17 10585216 10585318 -74853162 + MER46C DNA MER2_type 235 337 -1 860 208 46 83 chr17 10585326 10585566 -74852914 - MER46C DNA MER2_type -106 232 2 446 77 0 0 chr17 10585615 10585680 -74852800 + Alu SINE Alu 246 310 -2 2301 105 20 0 chr17 10585681 10585987 -74852493 + AluSx SINE Alu 1 312 0 2373 81 3 0 chr17 10586125 10586423 -74852057 + AluSp SINE Alu 5 303 -10 274 335 36 24 chr17 10586449 10586616 -74851864 - MLT1K LTR MaLR -17 571 403 376 274 30 15 chr17 10587405 10587540 -74850940 - L1ME3A LINE L1 -5 6165 6029 2482 79 0 3 chr17 10588100 10588405 -74850075 - AluSx SINE Alu -8 304 1 3768 150 8 22 chr17 10589145 10589189 -74849291 - L1MB1 LINE L1 -5 6163 6120 2189 113 0 42 chr17 10589189 10589500 -74848980 - AluSx SINE Alu -14 298 1 3768 150 8 22 chr17 10589500 10590076 -74848404 - L1MB1 LINE L1 -48 6120 5552 422 333 33 22 chr17 10591838 10592114 -74846366 + L1ME LINE L1 5518 5796 -325 208 306 139 0 chr17 10592179 10592251 -74846229 + L2 LINE L2 3203 3284 -29 2080 97 35 3 chr17 10593664 10593953 -74844527 - AluSq SINE Alu -15 298 1 352 120 67 13 chr17 10593984 10594059 -74844421 - L1MC2 LINE L1 -11 6333 6255 1439 155 73 0 chr17 10594073 10594318 -74844162 - AluJo SINE Alu -44 268 6 283 142 0 0 chr17 10594318 10594375 -74844105 - Alu SINE Alu -261 40 2 8236 167 92 66 chr17 10594375 10594811 -74843669 - L1MC3 LINE L1 -109 7676 7253 264 269 21 11 chr17 10594811 10594904 -74843576 - MLT1F1 LTR MaLR -434 133 40 8236 167 92 66 chr17 10594904 10595095 -74843385 - L1MC3 LINE L1 -532 7253 7068 2151 117 7 0 chr17 10595095 10595395 -74843085 - AluSx SINE Alu -10 302 1 8236 167 92 66 chr17 10595395 10596652 -74841828 - L1MC3 LINE L1 -717 7068 5648 2130 86 7 0 chr17 10596796 10597102 -74841378 - AluY SINE Alu 0 308 1 1986 154 0 10 chr17 10597724 10598029 -74840451 + AluJb SINE Alu 1 302 -10 2370 86 3 0 chr17 10598499 10598801 -74839679 - AluY SINE Alu -8 303 1 2255 88 0 3 chr17 10598957 10599264 -74839216 - AluSq SINE Alu 0 306 1 2154 123 3 3 chr17 10599679 10599981 -74838499 + AluSx SINE Alu 1 302 -10 532 178 225 0 chr17 10600209 10600338 -74838142 + MER5A DNA MER1_type 3 160 -29 857 159 144 55 chr17 10601033 10601234 -74837246 - MER20 DNA MER1_type 0 219 1 3365 204 24 32 chr17 10601480 10602137 -74836343 - MER82 DNA MER2_type -1 652 1 2213 107 0 3 chr17 10602901 10603192 -74835288 - AluSg SINE Alu -20 290 1 339 283 133 6 chr17 10603420 10603600 -74834880 - MIR SINE MIR -13 249 47 613 264 29 23 chr17 10603834 10603894 -74834586 - MER5B DNA MER1_type -3 175 117 1848 110 8 0 chr17 10603894 10604164 -74834316 + AluSx SINE Alu 37 308 0 613 264 29 23 chr17 10604164 10604276 -74834204 - MER5B DNA MER1_type -61 117 1 919 239 27 0 chr17 10604322 10604506 -74833974 + MER5A DNA MER1_type 1 189 0 368 212 61 0 chr17 10604512 10604611 -74833869 + L1MC4a LINE L1 5337 5441 -918 2343 89 3 3 chr17 10604611 10604915 -74833565 + AluSx SINE Alu 1 304 -8 1276 110 0 0 chr17 10604915 10605078 -74833402 + AluSg/x SINE Alu 132 294 -16 400 312 59 86 chr17 10605081 10605316 -74833164 + L1MC4a LINE L1 5431 5648 -2160 1784 176 0 3 chr17 10605316 10605606 -74832874 + AluSx SINE Alu 20 308 -4 400 312 59 86 chr17 10605606 10605845 -74832635 + L1MC4a LINE L1 5648 5892 -1916 213 261 112 45 chr17 10607205 10607339 -74831141 + L2 LINE L2 2804 2946 -326 745 274 163 26 chr17 10607565 10607915 -74830565 - L2 LINE L2 -10 3303 2906 2255 122 0 0 chr17 10608914 10609217 -74829263 + AluSq SINE Alu 1 303 -10 269 315 86 50 chr17 10610809 10611088 -74827392 - L2 LINE L2 -159 3113 2825 391 328 25 66 chr17 10611239 10611483 -74826997 + MIR SINE MIR 20 253 -9 699 130 0 0 chr17 10612034 10612134 -74826346 + FLAM_C SINE Alu 26 125 -18 1338 142 49 4 chr17 10612156 10612382 -74826098 - L1MC1 LINE L1 -2 6331 6096 233 234 13 26 chr17 10613080 10613157 -74825323 + GA-rich Low_complexity Low_complexity 1 76 0 24 32 0 0 chr17 10613578 10613609 -74824871 + AT_rich Low_complexity Low_complexity 1 31 0 1748 183 0 10 chr17 10613614 10613904 -74824576 + AluJo SINE Alu 1 287 -25 201 33 83 33 chr17 10613906 10613966 -74824514 + (TTAA)n Simple_repeat Simple_repeat 1 63 0 30 69 0 0 chr17 10614279 10614337 -74824143 + AT_rich Low_complexity Low_complexity 1 58 0 961 172 0 0 chr17 10614337 10614482 -74823998 - FRAM SINE Alu -31 145 1 256 268 52 10 chr17 10614696 10614793 -74823687 - L1MC4 LINE L1 -15 8027 7927 570 141 9 9 chr17 10614983 10615209 -74823271 + (TA)n Simple_repeat Simple_repeat 1 226 0 538 269 27 36 chr17 10615221 10615487 -74822993 - L1ME3 LINE L1 -303 5818 5599 2315 113 0 0 chr17 10616494 10616796 -74821684 + AluSx SINE Alu 1 302 -10 298 272 8 80 chr17 10616949 10617016 -74821464 + MIR3 SINE MIR 93 148 -60 344 261 5 116 chr17 10617016 10617150 -74821330 + MER5B DNA MER1_type 1 108 -70 2440 80 3 0 chr17 10617150 10617449 -74821031 - AluSp SINE Alu -13 300 1 344 261 5 116 chr17 10617449 10617513 -74820967 + MER5B DNA MER1_type 108 177 -1 298 272 8 80 chr17 10617513 10617570 -74820910 + MIR3 SINE MIR 148 208 0 444 222 77 26 chr17 10617690 10617807 -74820673 + L2 LINE L2 3148 3270 -2 2320 72 24 0 chr17 10618049 10618339 -74820141 - AluSx SINE Alu -15 297 1 818 286 241 32 chr17 10619038 10619888 -74818592 - L2 LINE L2 -402 2912 1885 418 273 26 11 chr17 10619897 10620051 -74818429 - MIR SINE MIR -62 146 36 1663 110 0 25 chr17 10620490 10620726 -74817754 - AluSg/x SINE Alu -7 303 74 1504 233 30 15 chr17 10621005 10621400 -74817080 - L1ME2 LINE L1 -13 6151 5751 22 35 0 0 chr17 10621403 10621432 -74817048 + AT_rich Low_complexity Low_complexity 1 29 0 376 250 14 56 chr17 10621522 10621666 -74816814 + MIR SINE MIR 17 154 -108 225 0 0 0 chr17 10622093 10622118 -74816362 + (TG)n Simple_repeat Simple_repeat 1 25 0 301 198 12 93 chr17 10622258 10622344 -74816136 + L2 LINE L2 3191 3269 -44 746 137 4 40 chr17 10622367 10622652 -74815828 + (GGGA)n Simple_repeat Simple_repeat 1 274 0 853 93 0 31 chr17 10622902 10623063 -74815417 + (GGGA)n Simple_repeat Simple_repeat 4 159 0 218 304 152 17 chr17 10623081 10623145 -74815335 - L2 LINE L2 -601 2713 2659 1210 184 108 54 chr17 10623145 10623514 -74814966 - MLT1B LTR MaLR -1 389 1 218 304 152 17 chr17 10623514 10623686 -74814794 - L2 LINE L2 -655 2659 2445 827 251 150 39 chr17 10623715 10624102 -74814378 + MLT1C LTR MaLR 36 465 -2 249 114 0 0 chr17 10624462 10624497 -74813983 + U2 snRNA snRNA 1 35 -153 495 277 14 20 chr17 10625083 10625231 -74813249 + MIR SINE MIR 90 236 -26 2422 92 0 7 chr17 10625469 10625775 -74812705 + AluSp SINE Alu 1 304 -9 1853 146 10 17 chr17 10626097 10626392 -74812088 - AluJo SINE Alu -19 293 1 266 311 101 14 chr17 10626492 10626701 -74811779 + L2 LINE L2 2554 2780 -534 2365 101 3 0 chr17 10626702 10626999 -74811481 - AluSx SINE Alu -14 298 1 328 358 17 0 chr17 10627334 10627454 -74811026 + L2 LINE L2 3151 3272 0 514 325 64 65 chr17 10629075 10629657 -74808823 - MLT1K LTR MaLR -6 582 2 2334 101 0 10 chr17 10629678 10629986 -74808494 + AluSg SINE Alu 1 305 -5 2309 141 34 18 chr17 10630095 10630479 -74808001 - MLT1B LTR MaLR 0 390 1 405 0 0 0 chr17 10631228 10631273 -74807207 + (CA)n Simple_repeat Simple_repeat 2 46 0 2347 60 13 13 chr17 10631311 10631613 -74806867 - AluSq SINE Alu -11 302 1 363 198 45 0 chr17 10631613 10631724 -74806756 + CT-rich Low_complexity Low_complexity 2 117 0 195 349 12 12 chr17 10632743 10632826 -74805654 + L2 LINE L2 3186 3268 -4 2231 111 0 13 chr17 10633335 10633651 -74804829 + AluSx SINE Alu 1 312 0 2411 96 3 0 chr17 10633766 10634067 -74804413 - AluSp SINE Alu -11 302 1 768 143 0 32 chr17 10634638 10634764 -74803716 + FLAM_A SINE Alu 1 122 -11 303 258 40 24 chr17 10636137 10636261 -74802219 - MLT1K LTR MaLR -3 585 460 2313 105 0 0 chr17 10637350 10637646 -74800834 - AluSg SINE Alu -14 296 1 1998 80 11 8 chr17 10638701 10638965 -74799515 + AluSc SINE Alu 35 299 -10 225 288 0 0 chr17 10639163 10639236 -74799244 + L1MEc LINE L1 1712 1784 -4612 359 310 7 13 chr17 10639301 10639456 -74799024 + L1MEc LINE L1 1919 2072 -4324 446 259 62 55 chr17 10639476 10639651 -74798829 + L1MEc LINE L1 2156 2335 -4061 2315 100 0 7 chr17 10639651 10639960 -74798520 + AluSx SINE Alu 1 307 -5 446 259 62 55 chr17 10639960 10640093 -74798387 + L1MEc LINE L1 2335 2466 -3930 21 57 0 0 chr17 10640130 10640165 -74798315 + AT_rich Low_complexity Low_complexity 1 35 0 427 186 29 20 chr17 10640166 10640268 -74798212 - L1MC5 LINE L1 -51 7910 7808 2413 94 13 0 chr17 10640311 10640619 -74797861 - AluSx SINE Alu 0 312 1 815 125 0 161 chr17 10640621 10640845 -74797635 - L1MC5 LINE L1 -1018 6943 6756 250 250 0 16 chr17 10640865 10640929 -74797551 + (CATATA)n Simple_repeat Simple_repeat 4 66 0 2031 256 117 44 chr17 10641281 10642381 -74796099 - L1MC4a LINE L1 -749 5397 4985 2094 78 37 0 chr17 10642381 10642688 -74795792 + AluSg SINE Alu 1 317 0 2031 256 117 44 chr17 10642688 10642781 -74795699 - L1MC4a LINE L1 -1161 4985 4900 4972 250 68 28 chr17 10642788 10643824 -74794656 + L1MEc LINE L1 2448 3441 -2774 2250 87 10 17 chr17 10643824 10644124 -74794356 + AluSq SINE Alu 1 298 -15 4972 250 68 28 chr17 10644124 10645112 -74793368 + L1MEc LINE L1 3441 4585 -1630 447 287 72 38 chr17 10645124 10645361 -74793119 + L1MEc LINE L1 4852 5096 -1119 25 83 0 0 chr17 10645952 10646012 -74792468 + AT_rich Low_complexity Low_complexity 1 60 0 22 0 0 0 chr17 10646323 10646345 -74792135 + AT_rich Low_complexity Low_complexity 1 22 0 1967 148 7 14 chr17 10647013 10647310 -74791170 - AluJb SINE Alu -17 295 1 1483 142 99 0 chr17 10647584 10647886 -74790594 + Charlie5 DNA MER1_type 2235 2566 -46 30 45 0 0 chr17 10648614 10648658 -74789822 + AT_rich Low_complexity Low_complexity 1 44 0 2362 104 0 0 chr17 10648659 10648957 -74789523 - AluSx SINE Alu -14 298 1 186 305 66 60 chr17 10649012 10649179 -74789301 + L2 LINE L2 2705 2872 -442 1869 213 57 32 chr17 10649467 10649959 -74788521 + MLT1D LTR MaLR 1 504 -1 2321 109 0 0 chr17 10651544 10651838 -74786642 + AluSx SINE Alu 1 294 -18 1484 224 56 44 chr17 10652324 10652805 -74785675 + L2 LINE L2 1962 2448 -866 411 275 56 7 chr17 10653059 10653201 -74785279 + MIR3 SINE MIR 36 184 -24 2499 70 7 0 chr17 10653495 10653797 -74784683 - AluSq SINE Alu -9 304 1 1401 118 5 25 chr17 10654539 10654773 -74783707 - AluSg/x SINE Alu 0 315 86 717 158 53 18 chr17 10654933 10655104 -74783376 + L1MD1 LINE L1 6066 6242 0 537 286 54 75 chr17 10655810 10656251 -74782229 + L2 LINE L2 2878 3309 -4 189 0 0 0 chr17 10657438 10657459 -74781021 + (T)n Simple_repeat Simple_repeat 1 21 0 822 154 23 0 chr17 10657753 10657883 -74780597 - FLAM_A SINE Alu 0 133 1 287 163 0 0 chr17 10658976 10659025 -74779455 + MER103 DNA DNA 74 122 -44 777 257 62 55 chr17 10659056 10659313 -74779167 + MLT1K LTR MaLR 2 260 -328 415 299 53 24 chr17 10659373 10659580 -74778900 + MLT1K LTR MaLR 376 588 0 1261 117 66 5 chr17 10659756 10659953 -74778527 - MER46A DNA MER2_type -1 235 27 2592 45 3 0 chr17 10660317 10660609 -74777871 + AluY SINE Alu 1 293 -18 23 0 0 0 chr17 10660974 10660997 -74777483 + AT_rich Low_complexity Low_complexity 1 23 0 1609 144 0 47 chr17 10661160 10661438 -74777042 - AluJb SINE Alu -8 304 40 484 97 0 14 chr17 10661488 10661560 -74776920 - AluJb SINE Alu -202 110 40 2131 103 0 37 chr17 10662114 10662435 -74776045 + AluSc SINE Alu 1 309 0 906 214 0 0 chr17 10662650 10662823 -74775657 - FRAM SINE Alu -3 173 1 28 0 0 0 chr17 10662848 10662876 -74775604 + AT_rich Low_complexity Low_complexity 1 28 0 2274 72 3 0 chr17 10665491 10665783 -74772697 - AluSq SINE Alu -20 293 1 237 33 0 0 chr17 10665848 10665878 -74772602 + (T)n Simple_repeat Simple_repeat 1 30 0 1264 174 41 0 chr17 10666282 10666524 -74771956 - L1MD3 LINE L1 -10 7985 7734 23 33 0 0 chr17 10667267 10667297 -74771183 + AT_rich Low_complexity Low_complexity 1 30 0 2408 223 224 64 chr17 10667305 10667491 -74770989 - L1MC4 LINE L1 -144 7898 7743 364 136 0 0 chr17 10667491 10667550 -74770930 - AluSp/q SINE Alu -2 301 243 2408 223 224 64 chr17 10667550 10668544 -74769936 - L1MC4 LINE L1 -299 7743 6461 2058 120 17 3 chr17 10670530 10670822 -74767658 + AluSx SINE Alu 1 296 -16 341 67 0 0 chr17 10670848 10670893 -74767587 - L1MA6 LINE L1 -7 6293 6249 4167 155 35 7 chr17 10670893 10672252 -74766228 - L1MA5 LINE L1 -284 6016 4623 490 242 94 1 chr17 10672612 10672791 -74765689 - L1MA10 LINE L1 -4 6330 5978 2861 10 0 0 chr17 10672806 10673111 -74765369 - AluYa5 SINE Alu -6 305 1 2214 197 56 5 chr17 10673155 10673897 -74764583 - L1ME LINE L1 -332 5834 5023 2198 99 31 7 chr17 10675345 10675639 -74762841 - AluSx SINE Alu -11 301 1 2039 119 0 44 chr17 10675681 10676000 -74762480 - AluSx SINE Alu -7 305 1 26 30 0 0 chr17 10678194 10678227 -74760253 + AT_rich Low_complexity Low_complexity 1 33 0 518 283 57 76 chr17 10678252 10678567 -74759913 + L1ME3 LINE L1 5351 5659 -2149 227 329 80 15 chr17 10681706 10681843 -74756637 - MER5A DNA MER1_type -37 152 7 1387 185 32 50 chr17 10681866 10682147 -74756333 + AluJo SINE Alu 2 277 -35 25 31 0 0 chr17 10682173 10682205 -74756275 + AT_rich Low_complexity Low_complexity 1 32 0 1715 155 72 35 chr17 10682528 10682698 -74755782 + MLT1B LTR MaLR 2 164 -226 2226 99 0 7 chr17 10682698 10682990 -74755490 + AluSx SINE Alu 1 290 -22 1715 155 72 35 chr17 10682990 10683194 -74755286 + MLT1B LTR MaLR 164 390 0 2518 73 7 0 chr17 10683808 10684111 -74754369 - AluSp SINE Alu -8 305 1 2215 102 3 13 chr17 10684608 10684921 -74753559 - AluSp SINE Alu -3 310 1 2277 99 26 0 chr17 10685555 10685859 -74752621 + AluSp SINE Alu 1 312 -1 745 221 55 51 chr17 10686260 10686477 -74752003 + L1ME3 LINE L1 5935 6152 -10 357 256 153 22 chr17 10687395 10687486 -74750994 + MER5A DNA MER1_type 14 131 -58 2206 84 0 40 chr17 10687486 10687814 -74750666 - AluSq SINE Alu 0 316 1 357 256 153 22 chr17 10687814 10687858 -74750622 + MER5A DNA MER1_type 131 168 -21 1992 94 0 0 chr17 10688698 10688953 -74749527 + AluSc SINE Alu 55 309 0 627 186 93 21 chr17 10689316 10689456 -74749024 + L1ME1 LINE L1 6012 6161 -5 2516 48 0 3 chr17 10690081 10690373 -74748107 + AluY SINE Alu 15 305 -6 394 255 147 105 chr17 10690507 10690753 -74747727 + L1ME4a LINE L1 5500 5767 -354 2281 92 3 13 chr17 10690753 10691058 -74747422 + AluSx SINE Alu 1 302 -10 394 255 147 105 chr17 10691058 10691164 -74747316 + L1ME4a LINE L1 5767 5867 -254 629 203 0 23 chr17 10691341 10691474 -74747006 + FLAM_A SINE Alu 4 133 0 265 150 0 208 chr17 10691970 10692006 -74746474 - MIR3 SINE MIR -1 207 165 1967 160 0 22 chr17 10692006 10692324 -74746156 - AluJo SINE Alu -1 311 1 265 150 0 208 chr17 10692324 10692361 -74746119 - MIR3 SINE MIR -43 165 165 2282 89 0 45 chr17 10692361 10692675 -74745805 - AluSx SINE Alu -12 300 1 265 150 0 208 chr17 10692675 10692720 -74745760 - MIR3 SINE MIR -42 166 113 204 292 33 50 chr17 10692839 10692959 -74745521 + MIR SINE MIR 79 196 -66 394 233 104 25 chr17 10693000 10693163 -74745317 + L1M LINE L1 5254 5429 -2379 277 241 21 50 chr17 10693231 10693372 -74745108 - L1MC5 LINE L1 -220 7741 7605 222 91 0 0 chr17 10693523 10693556 -74744924 + (TAGA)n Simple_repeat Simple_repeat 4 36 0 2064 120 0 0 chr17 10693557 10693833 -74744647 - AluSx SINE Alu -36 276 1 423 220 114 59 chr17 10693835 10694071 -74744409 - L1MC4a LINE L1 -1452 6356 6108 1734 254 114 41 chr17 10694075 10694244 -74744236 - L1MC4a LINE L1 -1759 6049 5894 2137 129 3 3 chr17 10694244 10694546 -74743934 - AluSx SINE Alu -10 302 1 1734 254 114 41 chr17 10694546 10695112 -74743368 - L1MC4a LINE L1 -1914 5894 5260 1520 155 30 69 chr17 10695171 10695475 -74743005 - AluJo SINE Alu -9 303 12 942 202 35 0 chr17 10695475 10695648 -74742832 - AluJo SINE Alu -133 179 1 696 277 141 29 chr17 10695683 10696384 -74742096 - L1MC4a LINE L1 -979 5167 4390 192 250 21 0 chr17 10696418 10696466 -74742014 - MER5B DNA MER1_type -129 49 1 2372 110 0 0 chr17 10696505 10696815 -74741665 + AluSx SINE Alu 3 312 0 392 314 17 11 chr17 10697524 10697699 -74740781 + MIR SINE MIR 24 199 -63 2437 102 0 0 chr17 10697860 10698165 -74740315 - AluSx SINE Alu -7 305 1 2082 128 0 0 chr17 10698806 10699141 -74739339 - AluSx SINE Alu 0 335 1 356 292 99 69 chr17 10699183 10699618 -74738862 + L1MC4 LINE L1 7595 8042 0 2026 157 0 0 chr17 10699624 10699936 -74738544 + AluSx SINE Alu 1 312 0 261 0 0 0 chr17 10700627 10700656 -74737824 + (T)n Simple_repeat Simple_repeat 1 29 0 2285 116 0 0 chr17 10700669 10700963 -74737517 + AluSp SINE Alu 1 294 -19 2111 114 0 14 chr17 10700966 10701247 -74737233 - AluSx SINE Alu -35 277 1 2386 74 0 7 chr17 10701255 10701552 -74736928 - AluY SINE Alu -16 295 1 277 348 57 6 chr17 10701767 10701925 -74736555 - MIR SINE MIR -77 185 20 265 254 0 28 chr17 10704027 10704098 -74734382 + GA-rich Low_complexity Low_complexity 5 73 0 27 0 0 0 chr17 10704106 10704133 -74734347 + AT_rich Low_complexity Low_complexity 1 27 0 2210 113 0 35 chr17 10705384 10705702 -74732778 - AluSq SINE Alu -6 307 1 2216 108 7 0 chr17 10705996 10706284 -74732196 + AluSg SINE Alu 1 290 -20 564 141 25 8 chr17 10707689 10707810 -74730670 + GA-rich Low_complexity Low_complexity 2 124 0 643 91 0 30 chr17 10707886 10707985 -74730495 + AluY SINE Alu 198 293 -18 2709 55 0 0 chr17 10709025 10709336 -74729144 + AluY SINE Alu 1 311 0 197 285 152 18 chr17 10709738 10709903 -74728577 + MIR SINE MIR 21 207 -55 2436 78 3 0 chr17 10709905 10710198 -74728282 + AluSc SINE Alu 1 294 -15 2244 105 7 0 chr17 10710743 10711039 -74727441 - AluSg SINE Alu -12 298 1 1412 176 40 0 chr17 10711104 10711376 -74727104 + L1MA7 LINE L1 6009 6291 0 2380 82 0 16 chr17 10711670 10711986 -74726494 + AluY SINE Alu 1 311 0 2343 89 3 0 chr17 10712971 10713262 -74725218 + AluSp SINE Alu 1 292 -21 642 328 52 23 chr17 10713431 10714027 -74724453 - L2 LINE L2 -79 3234 2624 2464 54 0 0 chr17 10714104 10714417 -74724063 + AluSc SINE Alu 2 314 0 1903 164 0 7 chr17 10714870 10715174 -74723306 - AluJb SINE Alu -4 308 7 1454 99 26 0 chr17 10716323 10716515 -74721965 + AluSx SINE Alu 1 197 -115 2049 119 18 7 chr17 10716515 10716793 -74721687 - AluSx SINE Alu -31 281 1 731 130 19 0 chr17 10716793 10716901 -74721579 + AluSx SINE Alu 186 295 -17 2290 113 10 0 chr17 10717766 10718068 -74720412 - AluSx SINE Alu -7 305 1 2456 90 0 0 chr17 10718272 10718572 -74719908 + AluSc SINE Alu 1 300 -9 2343 108 0 0 chr17 10720132 10720437 -74718043 + AluY SINE Alu 1 305 -6 487 343 64 6 chr17 10721065 10721237 -74717243 + MIR3 SINE MIR 17 198 -10 185 279 29 29 chr17 10721218 10721286 -74717194 + L3 LINE CR1 450 517 -1060 * 199 273 0 0 chr17 10722670 10722714 -74715766 - L3 LINE CR1 -4 1573 1530 2497 78 0 0 chr17 10724586 10724882 -74713598 + AluSq SINE Alu 1 296 -17 2351 85 0 7 chr17 10725018 10725312 -74713168 - AluSg SINE Alu -18 292 1 189 0 0 0 chr17 10725636 10725657 -74712823 + (T)n Simple_repeat Simple_repeat 1 21 0 1863 101 8 0 chr17 10725665 10725903 -74712577 - AluSg SINE Alu -70 240 1 278 311 57 19 chr17 10725960 10726066 -74712414 + L2 LINE L2 3162 3271 -1 435 254 56 21 chr17 10727164 10727306 -74711174 + MIR3 SINE MIR 34 180 -28 2128 106 42 0 chr17 10728733 10729016 -74709464 - AluSq SINE Alu -18 295 1 1732 187 11 0 chr17 10729527 10729857 -74708623 + AluJb SINE Alu 1 333 0 2256 95 0 38 chr17 10731063 10731378 -74707102 - AluSq SINE Alu -10 303 1 294 302 206 0 chr17 10732401 10732527 -74705953 - MIR3 SINE MIR -25 183 32 3000 53 11 5 chr17 10732542 10732922 -74705558 + L1PA8 LINE L1 5781 6162 -10 213 333 128 10 chr17 10733783 10733885 -74704595 - L2 LINE L2 -8 3264 3151 783 223 53 57 chr17 10734182 10734366 -74704114 + L1MC5 LINE L1 7414 7598 -363 288 0 0 0 chr17 10734366 10734398 -74704082 + (CA)n Simple_repeat Simple_repeat 2 33 0 783 223 53 57 chr17 10734398 10734531 -74703949 + L1MC5 LINE L1 7598 7730 -231 2485 75 0 0 chr17 10734531 10734826 -74703654 + AluSc SINE Alu 1 295 -14 263 219 229 58 chr17 10735358 10735513 -74702967 - MIR SINE MIR -52 210 42 2208 132 0 6 chr17 10735918 10736229 -74702251 - AluSx SINE Alu -3 309 1 196 230 14 81 chr17 10737446 10737520 -74700960 + MIR SINE MIR 82 150 -58 186 279 81 35 chr17 10737792 10737878 -74700602 - L2 LINE L2 0 3272 3183 2142 117 0 0 chr17 10739660 10739963 -74698517 - AluSg SINE Alu 0 303 1 437 239 25 86 chr17 10740399 10740439 -74698041 - MER5A DNA MER1_type 0 189 148 2289 126 0 0 chr17 10740439 10740741 -74697739 - AluSg SINE Alu -8 302 1 437 239 25 86 chr17 10740741 10740863 -74697617 - MER5A DNA MER1_type -41 148 37 196 345 14 50 chr17 10740883 10741022 -74697458 - MER5A DNA MER1_type -35 154 21 402 295 181 0 chr17 10741046 10741195 -74697285 + MER5A DNA MER1_type 11 186 -3 845 218 16 27 chr17 10741206 10741394 -74697086 - MER5A DNA MER1_type 0 189 4 189 121 0 0 chr17 10741449 10741482 -74696998 + (T)n Simple_repeat Simple_repeat 1 33 0 2265 132 0 0 chr17 10741749 10742060 -74696420 + AluSx SINE Alu 1 311 -1 180 152 0 0 chr17 10742060 10742093 -74696387 + GA-rich Low_complexity Low_complexity 1 33 0 2164 104 37 0 chr17 10742159 10742456 -74696024 + AluSc SINE Alu 1 308 -1 271 0 51 0 chr17 10742489 10742528 -74695952 + (CAAAAA)n Simple_repeat Simple_repeat 2 42 0 2628 59 0 0 chr17 10742538 10742844 -74695636 + AluY SINE Alu 1 306 -5 2568 33 17 0 chr17 10742852 10743151 -74695329 + AluY SINE Alu 1 304 -7 304 28 0 0 chr17 10743605 10743641 -74694839 - AluY SINE Alu -254 47 12 678 169 38 172 chr17 10743781 10743967 -74694513 - MER96B DNA MER1_type? -182 235 94 2507 76 0 6 chr17 10743967 10744281 -74694199 - AluSx SINE Alu 0 312 1 678 169 38 172 chr17 10744281 10744361 -74694119 - MER96B DNA MER1_type? -323 94 5 710 204 34 40 chr17 10745023 10745199 -74693281 + MER5B DNA MER1_type 1 175 -3 1379 130 38 61 chr17 10745316 10745421 -74693059 - AluJb SINE Alu -57 255 149 237 33 0 0 chr17 10745421 10745451 -74693029 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 2467 43 13 20 chr17 10745455 10745755 -74692725 - AluY SINE Alu -13 298 1 1379 130 38 61 chr17 10745755 10745905 -74692575 - AluJb SINE Alu -166 146 1 338 307 89 61 chr17 10745950 10746230 -74692250 - L3 LINE CR1 -111 1466 1179 503 69 14 0 chr17 10746468 10746540 -74691940 + (TCTA)n Simple_repeat Simple_repeat 2 74 0 1648 145 7 35 chr17 10746540 10746830 -74691650 - AluJb SINE Alu -30 282 1 328 202 11 35 chr17 10746842 10746944 -74691536 + MIR SINE MIR 91 189 -64 253 167 62 0 chr17 10747640 10747688 -74690792 - L2 LINE L2 -6 3307 3257 1298 166 50 22 chr17 10748867 10749145 -74689335 + L1MB7 LINE L1 5888 6173 -11 432 0 0 0 chr17 10749606 10749654 -74688826 + (CA)n Simple_repeat Simple_repeat 2 49 0 2333 48 4 0 chr17 10749761 10750029 -74688451 - AluY SINE Alu -4 307 39 2340 72 24 0 chr17 10751219 10751510 -74686970 + AluSx SINE Alu 1 298 -14 494 222 77 26 chr17 10751752 10751869 -74686611 - L2 LINE L2 -2 3270 3148 350 272 8 80 chr17 10751989 10752046 -74686434 - MIR3 SINE MIR 0 208 163 371 261 5 116 chr17 10752046 10752110 -74686370 - MER5B DNA MER1_type -1 177 108 2454 80 3 0 chr17 10752110 10752409 -74686071 + AluSp SINE Alu 1 300 -13 371 261 5 116 chr17 10752409 10752543 -74685937 - MER5B DNA MER1_type -70 108 1 350 272 8 80 chr17 10752543 10752610 -74685870 - MIR3 SINE MIR -45 163 93 2107 138 44 0 chr17 10802886 10803183 -74635297 - AluSx SINE Alu -2 310 1 608 303 38 0 chr17 10803212 10803397 -74635083 + MIR SINE MIR 59 250 -12 445 286 67 6 chr17 10803454 10803632 -74634848 - MIR SINE MIR -32 230 42 2112 108 4 4 chr17 10803735 10804014 -74634466 - AluSp SINE Alu -16 297 19 1698 173 94 15 chr17 10804125 10804466 -74634014 + MLT1B LTR MaLR 23 390 0 228 245 78 59 chr17 10805063 10805165 -74633315 + MLT1L LTR MaLR 496 599 -16 1801 101 0 0 chr17 10806889 10807126 -74631354 + AluSg/x SINE Alu 74 310 0 1322 256 39 31 chr17 10807129 10807543 -74630937 - MLT1J2 LTR MaLR -33 417 1 427 306 29 99 chr17 10807559 10807578 -74630902 + MLT1J LTR MaLR 107 126 -385 2374 211 57 16 chr17 10807578 10808122 -74630358 - MLT1F1 LTR MaLR 0 567 2 427 306 29 99 chr17 10808122 10808517 -74629963 + MLT1J LTR MaLR 126 492 -19 214 136 45 23 chr17 10808549 10808593 -74629887 - L2 LINE L2 -23 3249 3205 2379 77 6 13 chr17 10808621 10808934 -74629546 + AluY SINE Alu 1 311 0 668 259 6 0 chr17 10810321 10810483 -74627997 - MER5A DNA MER1_type -14 175 13 930 169 28 5 chr17 10810508 10810521 -74627959 - MER5A DNA MER1_type -2 181 170 2455 155 57 0 chr17 10810521 10810927 -74627553 - MSTB1 LTR MaLR 0 432 4 930 169 28 5 chr17 10810927 10811100 -74627380 - MER5A DNA MER1_type -13 170 9 425 242 71 9 chr17 10811170 10811384 -74627096 + MER115 DNA AcHobo 136 435 -258 472 348 25 16 chr17 10811460 10811704 -74626776 + MIR SINE MIR 8 253 -9 792 250 9 24 chr17 10812299 10812511 -74625969 + MER3 DNA MER1_type 1 209 0 343 342 100 26 chr17 10812891 10813271 -74625209 + L1M4 LINE L1 4487 4894 -1252 872 135 0 8 chr17 10813500 10813633 -74624847 + AluSq/x SINE Alu 1 132 -180 317 142 15 5 chr17 10813735 10813799 -74624681 - Alu SINE Alu -256 46 3 * 2070 144 30 15 chr17 10813799 10814324 -74624156 - L1P4 LINE L1 -696 5470 4938 963 101 20 0 chr17 10814491 10814639 -74623841 - L1PB2 LINE L1 -2 6149 5999 720 109 0 0 chr17 10814641 10814742 -74623738 - L1PB2 LINE L1 -410 5741 5641 1865 222 100 16 chr17 10814842 10815412 -74623068 - MLT2F LTR ERVL -41 611 1 2580 23 0 0 chr17 10815637 10815937 -74622543 + L1P2 LINE L1 5275 5574 -580 226 242 10 61 chr17 10817073 10817172 -74621308 + HAL1b LINE L1 814 907 -441 717 158 53 18 chr17 10817468 10817639 -74620841 - L1MD1 LINE L1 0 6242 6066 1402 118 5 25 chr17 10817799 10818033 -74620447 + AluSg/x SINE Alu 86 315 0 2581 62 7 0 chr17 10818774 10819082 -74619398 + AluSq SINE Alu 1 310 -3 411 275 56 7 chr17 10819377 10819519 -74618961 - MIR3 SINE MIR -24 184 36 1524 227 56 44 chr17 10819773 10820254 -74618226 - L2 LINE L2 -866 2448 1962 22 0 0 0 chr17 10820354 10820376 -74618104 + AT_rich Low_complexity Low_complexity 1 22 0 2298 112 0 0 chr17 10820743 10821037 -74617443 - AluSx SINE Alu -18 294 1 1881 213 57 32 chr17 10822621 10823113 -74615367 - MLT1D LTR MaLR -1 504 1 186 305 66 60 chr17 10823401 10823568 -74614912 - L2 LINE L2 -442 2872 2705 2354 104 0 0 chr17 10823623 10823920 -74614560 + AluSx SINE Alu 1 297 -15 30 45 0 0 chr17 10823921 10823965 -74614515 + AT_rich Low_complexity Low_complexity 1 44 0 1465 146 99 0 chr17 10824694 10824996 -74613484 - Charlie5 DNA MER1_type -46 2566 2235 2030 140 7 13 chr17 10825270 10825570 -74612910 + AluJb SINE Alu 1 298 -14 22 0 0 0 chr17 10826241 10826263 -74612217 + AT_rich Low_complexity Low_complexity 1 22 0 25 83 0 0 chr17 10826574 10826634 -74611846 + AT_rich Low_complexity Low_complexity 1 60 0 465 283 72 38 chr17 10827228 10827465 -74611015 - L1M4 LINE L1 -1119 5027 4783 4961 252 67 26 chr17 10827477 10828465 -74610015 - L1M4 LINE L1 -1630 4516 3569 2264 87 10 17 chr17 10828465 10828765 -74609715 - AluSq SINE Alu -15 298 1 4961 252 67 26 chr17 10828765 10829831 -74608649 - L1M4 LINE L1 -2577 3569 2330 292 276 33 109 chr17 10829814 10829895 -74608585 + L1MC4a LINE L1 4912 4998 -1148 * 2093 78 37 0 chr17 10829895 10830202 -74608278 - AluSg SINE Alu 0 317 1 292 276 33 109 chr17 10830202 10830478 -74608002 + L1MC4a LINE L1 4998 5243 -903 1969 256 136 8 chr17 10830568 10831302 -74607178 + L1MC4a LINE L1 5351 6178 -1630 235 246 0 18 chr17 10831657 10831714 -74606766 + (TATATG)n Simple_repeat Simple_repeat 4 59 0 800 129 0 161 chr17 10831738 10831962 -74606518 + L1MC5 LINE L1 6756 6943 -1018 2434 91 13 0 chr17 10831964 10832272 -74606208 + AluSx SINE Alu 1 312 0 444 176 29 20 chr17 10832310 10832412 -74606068 + L1MC5 LINE L1 7808 7910 -51 22 56 0 0 chr17 10832413 10832449 -74606031 + AT_rich Low_complexity Low_complexity 1 36 0 480 274 52 48 chr17 10832486 10832620 -74605860 - L1MEc LINE L1 -3930 2466 2334 2351 94 0 7 chr17 10832620 10832928 -74605552 - AluSx SINE Alu -6 306 1 480 274 52 48 chr17 10832928 10833103 -74605377 - L1MEc LINE L1 -4062 2334 2156 359 310 7 13 chr17 10833123 10833278 -74605202 - L1MEc LINE L1 -4324 2072 1919 2006 79 11 8 chr17 10833614 10833879 -74604601 - AluSc SINE Alu -9 300 35 2305 105 0 0 chr17 10834931 10835226 -74603254 + AluSg SINE Alu 1 295 -15 303 258 40 24 chr17 10836315 10836439 -74602041 + MLT1K LTR MaLR 460 585 -3 759 151 0 32 chr17 10837812 10837938 -74600542 - FLAM_A SINE Alu -11 122 1 2411 96 3 0 chr17 10838509 10838810 -74599670 + AluSp SINE Alu 1 302 -11 2064 127 3 13 chr17 10838926 10839241 -74599239 - AluSx SINE Alu 0 312 1 205 337 12 12 chr17 10839750 10839833 -74598647 - L2 LINE L2 -4 3268 3186 384 189 45 0 chr17 10840901 10841012 -74597468 + GA-rich Low_complexity Low_complexity 2 117 0 2363 57 13 13 chr17 10841043 10841344 -74597136 + AluSq SINE Alu 1 301 -12 2309 141 34 18 chr17 10842151 10842535 -74595945 + MLT1B LTR MaLR 1 390 0 2334 101 0 10 chr17 10842644 10842952 -74595528 - AluSg SINE Alu -5 305 1 525 325 64 65 chr17 10842973 10843555 -74594925 + MLT1K LTR MaLR 2 582 -6 328 358 17 0 chr17 10845176 10845296 -74593184 - L2 LINE L2 0 3272 3151 2367 101 3 0 chr17 10845631 10845929 -74592551 + AluSx SINE Alu 1 299 -13 266 311 101 14 chr17 10845930 10846139 -74592341 - L2 LINE L2 -534 2780 2554 1853 146 10 17 chr17 10846239 10846534 -74591946 + AluJo SINE Alu 1 293 -19 2438 88 0 7 chr17 10846856 10847162 -74591318 - AluSp SINE Alu -9 304 1 495 277 14 20 chr17 10847400 10847548 -74590932 - MIR SINE MIR -26 236 90 249 114 0 0 chr17 10848134 10848169 -74590311 - U2 snRNA snRNA -153 35 1 827 251 150 39 chr17 10848529 10848916 -74589564 - MLT1C LTR MaLR -2 465 36 218 304 152 17 chr17 10848945 10849117 -74589363 + L2 LINE L2 2445 2659 -655 1210 184 108 54 chr17 10849117 10849486 -74588994 + MLT1B LTR MaLR 1 389 -1 218 304 152 17 chr17 10849486 10849550 -74588930 + L2 LINE L2 2659 2713 -601 189 0 0 0 chr17 10849568 10849589 -74588891 + (TCCC)n Simple_repeat Simple_repeat 3 23 0 381 143 0 51 chr17 10849746 10849844 -74588636 + (TCCC)n Simple_repeat Simple_repeat 1 93 0 301 198 12 93 chr17 10849857 10849943 -74588537 - L2 LINE L2 -44 3269 3191 234 0 0 0 chr17 10850086 10850112 -74588368 + (CA)n Simple_repeat Simple_repeat 2 27 0 395 243 14 56 chr17 10850537 10850681 -74587799 - MIR SINE MIR -108 154 17 22 35 0 0 chr17 10850771 10850800 -74587680 + AT_rich Low_complexity Low_complexity 1 29 0 1504 233 30 15 chr17 10850803 10851198 -74587282 + L1ME2 LINE L1 5751 6151 -13 1663 110 0 25 chr17 10851477 10851713 -74586767 + AluSg/x SINE Alu 74 303 -7 427 265 26 11 chr17 10852151 10852305 -74586175 + MIR SINE MIR 36 189 -62 900 290 217 28 chr17 10852314 10853287 -74585193 + L2 LINE L2 1885 3037 -276 456 119 0 0 chr17 10853291 10853358 -74585122 + THE1C LTR MaLR 309 375 0 442 348 38 24 chr17 10853822 10854109 -74584371 + L2 LINE L2 3023 3313 0 231 36 0 0 chr17 10854454 10854482 -74583998 + (TCCC)n Simple_repeat Simple_repeat 3 30 0 1020 88 24 12 chr17 10854482 10854652 -74583828 + (TTTC)n Simple_repeat Simple_repeat 3 174 0 1146 182 0 0 chr17 10854657 10854838 -74583642 - AluJo SINE Alu -34 278 98 254 140 60 0 chr17 10854914 10854964 -74583516 + Alu SINE Alu 250 302 0 294 29 0 0 chr17 10855371 10855406 -74583074 + (CA)n Simple_repeat Simple_repeat 2 36 0 334 184 0 41 chr17 10855421 10855519 -74582961 + GA-rich Low_complexity Low_complexity 1 94 0 1091 61 0 0 chr17 10856344 10856475 -74582005 + AluSg1 SINE Alu 1 131 -178 1904 142 3 27 chr17 10856479 10856774 -74581706 + AluSx SINE Alu 1 288 -24 201 74 0 0 chr17 10856774 10856801 -74581679 + (GGGA)n Simple_repeat Simple_repeat 1 27 0 396 103 0 0 chr17 10856801 10856859 -74581621 + (GAAA)n Simple_repeat Simple_repeat 1 58 0 365 259 253 17 chr17 10857192 10857366 -74581114 + MIR SINE MIR 8 222 -40 183 389 101 0 chr17 10857835 10857984 -74580496 + L2 LINE L2 3106 3269 -3 386 249 107 53 chr17 10858491 10858660 -74579820 + MLT1K LTR MaLR 404 581 -7 181 347 11 21 chr17 10859848 10859943 -74578537 - L2 LINE L2 -52 3261 3168 1047 283 16 18 chr17 10860859 10861224 -74577256 + LTR16A LTR ERVL 25 449 -1 389 210 50 10 chr17 10861225 10861325 -74577155 + MIR SINE MIR 85 188 -74 331 200 0 106 chr17 10861404 10861489 -74576991 - MER20 DNA MER1_type -143 76 1 1764 160 0 27 chr17 10861512 10861805 -74576675 + AluJb SINE Alu 5 289 -23 216 67 0 0 chr17 10862477 10862507 -74575973 + (TTCA)n Simple_repeat Simple_repeat 1 30 0 2232 86 4 0 chr17 10862641 10862941 -74575539 - AluSx SINE Alu 0 301 1 2454 72 3 10 chr17 10864281 10864587 -74573893 + AluY SINE Alu 1 304 -7 718 182 80 45 chr17 10864816 10864992 -74573488 + MIR SINE MIR 12 192 -67 336 341 0 0 chr17 10865673 10865761 -74572719 + MIR SINE MIR 58 145 -117 456 226 43 86 chr17 10865819 10866005 -74572475 - MER5B DNA MER1_type 0 178 1 613 233 6 6 chr17 10866134 10866314 -74572166 + CT-rich Low_complexity Low_complexity 1 180 0 271 288 0 0 chr17 10866318 10866377 -74572103 + polypyrimidine Low_complexity Low_complexity 2 60 0 663 200 12 6 chr17 10866379 10866549 -74571931 + CT-rich Low_complexity Low_complexity 1 171 0 809 200 51 11 chr17 10866853 10867028 -74571452 - MER5A DNA MER1_type 0 189 8 1220 166 14 9 chr17 10867028 10867245 -74571235 - MER20 DNA MER1_type -1 218 1 1025 216 5 9 chr17 10867308 10867521 -74570959 + MER58A DNA MER1_type 12 223 -1 361 314 142 26 chr17 10867933 10868159 -74570321 - L2 LINE L2 -1 3271 3020 195 69 0 0 chr17 10868900 10868929 -74569551 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 282 247 111 47 chr17 10868999 10869114 -74569366 + MER112 DNA MER1_type 10 116 -144 2018 147 17 0 chr17 10869114 10869413 -74569067 + AluJb SINE Alu 1 304 -8 282 247 111 47 chr17 10869413 10869532 -74568948 + MER112 DNA MER1_type 116 259 -1 325 364 0 0 chr17 10869581 10869757 -74568723 + C-rich Low_complexity Low_complexity 4 179 0 389 347 0 0 chr17 10869779 10869955 -74568525 + C-rich Low_complexity Low_complexity 4 179 0 375 352 0 0 chr17 10869977 10870153 -74568327 + C-rich Low_complexity Low_complexity 4 179 0 2242 108 0 0 chr17 10870536 10870824 -74567656 - AluSg SINE Alu -12 298 11 22 70 0 0 chr17 10870990 10871033 -74567447 + AT_rich Low_complexity Low_complexity 1 43 0 2286 107 7 0 chr17 10871036 10871334 -74567146 - AluSx SINE Alu -12 300 1 1032 167 0 0 chr17 10871336 10871492 -74566988 - FRAM SINE Alu -15 161 6 407 327 54 10 chr17 10871528 10871733 -74566747 + LTR67 LTR ERVL 78 291 -266 237 279 15 52 chr17 10871828 10871964 -74566516 + LTR67 LTR ERVL 427 557 0 1420 277 66 20 chr17 10872627 10873114 -74565366 - LTR33 LTR ERVL -7 514 6 713 209 142 28 chr17 10873128 10873339 -74565141 - MIR SINE MIR -20 242 8 773 232 40 5 chr17 10873341 10873539 -74564941 - MER3 DNA MER1_type -4 205 1 2123 117 24 0 chr17 10873738 10873908 -74564572 - AluSx SINE Alu -8 304 123 324 0 0 0 chr17 10873908 10873944 -74564536 + (TTTTG)n Simple_repeat Simple_repeat 5 40 0 2123 117 24 0 chr17 10873944 10874064 -74564416 - AluSx SINE Alu -189 123 7 421 262 150 47 chr17 10874747 10874980 -74563500 - MIR SINE MIR -1 261 5 2438 72 3 0 chr17 10875242 10875533 -74562947 - AluSp SINE Alu -21 292 1 530 296 158 53 chr17 10875582 10875981 -74562499 - L1ME LINE L1 -412 5709 5269 23 0 0 0 chr17 10876173 10876196 -74562284 + AT_rich Low_complexity Low_complexity 1 23 0 731 161 0 8 chr17 10876228 10876346 -74562134 - FLAM_C SINE Alu -25 118 2 2380 106 0 0 chr17 10876417 10876728 -74561752 - AluSx SINE Alu -1 311 1 248 0 31 0 chr17 10876730 10876762 -74561718 + (TA)n Simple_repeat Simple_repeat 2 34 0 922 193 49 67 chr17 10876816 10877039 -74561441 + MER20 DNA MER1_type 1 219 0 361 285 112 65 chr17 10877396 10877610 -74560870 + MIR SINE MIR 20 243 -19 668 208 49 16 chr17 10877777 10877962 -74560518 - MIR SINE MIR -54 208 20 437 282 133 36 chr17 10878739 10878934 -74559546 - MIR SINE MIR -39 223 10 1879 233 122 20 chr17 10879202 10879742 -74558738 + MLT1G1 LTR MaLR 1 595 0 1762 194 0 10 chr17 10879983 10880293 -74558187 - AluJo SINE Alu -1 311 5 386 321 52 36 chr17 10880297 10880546 -74557934 - L3 LINE CR1 -193 1384 1132 935 162 181 0 chr17 10880908 10881118 -74557362 - L1MB5 LINE L1 -90 6084 5837 512 264 277 3 chr17 10881421 10881594 -74556886 + L2 LINE L2 2919 3043 -270 231 36 0 0 chr17 10881594 10881622 -74556858 + (TG)n Simple_repeat Simple_repeat 2 29 0 512 264 277 3 chr17 10881622 10881758 -74556722 + L2 LINE L2 3043 3313 0 237 207 0 0 chr17 10882374 10882456 -74556024 + (TG)n Simple_repeat Simple_repeat 1 82 0 718 265 6 6 chr17 10882626 10882792 -74555688 + MER5B DNA MER1_type 1 166 -12 275 312 10 67 chr17 10882845 10883012 -74555468 + MIR3 SINE MIR 44 196 -51 667 204 74 19 chr17 10883320 10883482 -74554998 + FRAM SINE Alu 1 168 -8 1165 157 25 20 chr17 10884888 10884905 -74553575 - AluJo SINE Alu 0 312 297 2202 115 0 37 chr17 10884905 10885226 -74553254 - AluSc SINE Alu 0 309 1 1165 157 25 20 chr17 10885226 10885405 -74553075 - AluJo SINE Alu -15 297 115 2253 93 0 17 chr17 10885579 10885879 -74552601 + AluSq SINE Alu 1 295 -18 258 324 75 30 chr17 10885910 10886077 -74552403 + L2 LINE L2 2865 3036 -236 466 309 146 20 chr17 10886299 10886600 -74551880 + MLT1H LTR MaLR 210 548 -1 433 245 29 7 chr17 10886628 10886767 -74551713 - LTR37B LTR ERV1 -111 357 216 573 144 0 0 chr17 10887173 10887263 -74551217 + AluS SINE Alu 222 311 -1 2306 95 0 0 chr17 10887471 10887780 -74550700 + AluSq SINE Alu 3 311 0 351 276 40 84 chr17 10887844 10888069 -74550411 + L2 LINE L2 3025 3239 -33 731 217 38 38 chr17 10888192 10888349 -74550131 - MER63A DNA MER1_type -1478 210 51 2204 113 3 7 chr17 10888349 10888642 -74549838 - AluSg SINE Alu -18 292 1 731 217 38 38 chr17 10888642 10888668 -74549812 - MER63A DNA MER1_type -1636 52 27 283 174 0 87 chr17 10888754 10888846 -74549634 + MER58 DNA MER1_type 45 128 -87 248 228 18 0 chr17 10888849 10888906 -74549574 + GA-rich Low_complexity Low_complexity 3 60 0 394 227 0 3 chr17 10888912 10888999 -74549481 + MER58 DNA MER1_type 257 2420 0 2319 86 7 0 chr17 10889049 10889340 -74549140 - AluSx SINE Alu -19 293 1 23 0 0 0 chr17 10889870 10889893 -74548587 + AT_rich Low_complexity Low_complexity 1 23 0 2503 247 76 21 chr17 10889893 10890707 -74547773 - L1ME1 LINE L1 -18 6217 5359 2255 123 7 3 chr17 10890733 10891043 -74547437 - AluSq SINE Alu -2 311 1 380 294 27 41 chr17 10891048 10891269 -74547211 - L1ME1 LINE L1 -2629 3586 3369 1375 185 0 16 chr17 10891270 10891513 -74546967 - AluJb SINE Alu -4 308 70 1849 231 122 15 chr17 10891513 10892149 -74546331 - L1M4 LINE L1 -953 5193 4480 297 75 0 0 chr17 10892149 10892189 -74546291 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 1849 231 122 15 chr17 10892189 10892224 -74546256 - L1M4 LINE L1 -1666 4480 4450 252 260 13 0 chr17 10892226 10892303 -74546177 - L1M4 LINE L1 -2625 3521 3444 1246 224 42 70 chr17 10892370 10892994 -74545486 - L1M4 LINE L1 -2693 3453 2848 * 1314 272 48 45 chr17 10892969 10893546 -74544934 - L1ME1 LINE L1 -4346 1914 1388 2336 270 44 30 chr17 10893549 10894264 -74544216 - L1ME1 LINE L1 -5517 879 150 2415 88 3 0 chr17 10894264 10894561 -74543919 - AluSp SINE Alu -15 298 1 2336 270 44 30 chr17 10894561 10894670 -74543810 - L1ME1 LINE L1 -6246 150 44 180 286 71 14 chr17 10894696 10894766 -74543714 + MER5B DNA MER1_type 1 74 -104 * 211 272 163 11 chr17 10894716 10894808 -74543672 - MER5A DNA MER1_type -22 167 62 263 128 0 0 chr17 10895057 10895096 -74543384 + MIR SINE MIR 224 262 0 424 244 94 47 chr17 10895128 10895255 -74543225 - MIR3 SINE MIR -63 145 13 342 0 0 0 chr17 10895309 10895347 -74543133 + (TG)n Simple_repeat Simple_repeat 2 39 0 2464 84 10 0 chr17 10896274 10896584 -74541896 - AluSp SINE Alu 0 313 1 253 263 149 97 chr17 10897146 10897260 -74541220 + MIR SINE MIR 17 136 -72 2268 109 0 0 chr17 10897284 10897613 -74540867 + AluSx SINE Alu 1 329 0 785 144 36 93 chr17 10899197 10899242 -74539238 - MER5A DNA MER1_type 0 189 143 2384 90 0 3 chr17 10899242 10899542 -74538938 - AluSc SINE Alu -10 299 1 785 144 36 93 chr17 10899542 10899690 -74538790 - MER5A DNA MER1_type -46 143 7 448 190 40 30 chr17 10900199 10900299 -74538181 - MER5A DNA MER1_type -5 184 84 537 230 9 18 chr17 10900304 10900417 -74538063 + MER81 DNA DNA 1 112 -2 484 141 0 0 chr17 10900434 10900505 -74537975 - MER5A DNA MER1_type -118 71 1 2073 104 47 0 chr17 10902226 10902505 -74535975 - AluSp SINE Alu -9 304 13 181 260 60 0 chr17 10902617 10902667 -74535813 - MIR SINE MIR -110 98 46 456 291 30 0 chr17 10903105 10903239 -74535241 + MIR3 SINE MIR 15 152 -56 627 195 122 24 chr17 10903253 10903361 -74535119 + MER5A DNA MER1_type 7 138 -51 1838 172 3 3 chr17 10903361 10903652 -74534828 - AluJb SINE Alu -10 302 12 627 195 122 24 chr17 10903652 10903707 -74534773 + MER5A DNA MER1_type 138 186 -3 2101 112 0 0 chr17 10903727 10904004 -74534476 + AluSg SINE Alu 24 300 -10 2359 98 0 0 chr17 10905070 10905365 -74533115 - AluSc SINE Alu -10 299 5 431 303 114 37 chr17 10905774 10906045 -74532435 + L3 LINE CR1 780 1071 -506 377 315 82 35 chr17 10906640 10906872 -74531608 + MIR SINE MIR 14 256 -6 1185 225 9 0 chr17 10907489 10907711 -74530769 - MER58A DNA MER1_type 0 224 1 499 286 0 92 chr17 10907721 10907917 -74530563 + MIR SINE MIR 20 197 -65 453 189 0 0 chr17 10907960 10908055 -74530425 + CT-rich Low_complexity Low_complexity 3 97 0 275 196 26 0 chr17 10909210 10909363 -74529117 + (TG)n Simple_repeat Simple_repeat 1 157 0 220 157 39 0 chr17 10909389 10909440 -74529040 + (TG)n Simple_repeat Simple_repeat 2 54 0 2126 141 0 0 chr17 10909816 10910121 -74528359 - AluSx SINE Alu -7 305 1 2612 40 0 3 chr17 10910558 10910855 -74527625 - AluY SINE Alu -15 296 1 669 266 29 34 chr17 10911245 10911452 -74527028 - MIR SINE MIR -51 211 6 491 255 79 123 chr17 10911583 10911668 -74526812 + L2 LINE L2 2677 2764 -508 2424 58 41 0 chr17 10911668 10911961 -74526519 - AluYa5 SINE Alu -6 305 1 491 255 79 123 chr17 10911961 10912407 -74526073 + L2 LINE L2 2764 3185 -87 2044 144 3 3 chr17 10912407 10912706 -74525774 - AluSx SINE Alu -13 299 1 491 255 79 123 chr17 10912706 10912755 -74525725 + L2 LINE L2 3185 3235 -37 370 285 78 6 chr17 10912953 10913108 -74525372 - MIR SINE MIR -55 207 44 185 287 198 0 chr17 10913963 10914064 -74524416 - MIR3 SINE MIR 0 208 88 226 318 47 0 chr17 10915622 10915707 -74522773 + MIR SINE MIR 65 153 -109 2125 120 7 13 chr17 10915761 10916061 -74522419 - AluSq SINE Alu -15 298 1 261 303 0 0 chr17 10916539 10916605 -74521875 - MER81 DNA DNA -43 71 6 2311 141 59 26 chr17 10917124 10917573 -74520907 - MLT1C LTR MaLR -8 459 1 206 128 51 0 chr17 10917942 10917981 -74520499 - L2 LINE L2 -8 3305 3265 533 187 285 0 chr17 10918660 10918783 -74519697 + MIR SINE MIR 60 217 -45 1530 58 0 21 chr17 10919294 10919482 -74518998 + AluY SINE Alu 110 293 -18 243 247 79 11 chr17 10919507 10919596 -74518884 + MER113 DNA MER1_type? 149 243 -278 909 174 5 85 chr17 10919601 10919709 -74518771 - MER58A DNA MER1_type -2196 224 109 2173 107 54 48 chr17 10919709 10920082 -74518398 + THE1C LTR MaLR 1 375 0 909 174 5 85 chr17 10920082 10920145 -74518335 - MER58A DNA MER1_type -2311 109 43 1919 120 8 0 chr17 10920145 10920403 -74518077 + AluSx SINE Alu 23 282 -30 231 61 0 0 chr17 10920404 10920437 -74518043 + (CAAAC)n Simple_repeat Simple_repeat 3 35 0 909 174 5 85 chr17 10920437 10920474 -74518006 - MER58A DNA MER1_type -2376 44 30 362 281 100 19 chr17 10920484 10920644 -74517836 + MER113 DNA MER1_type? 247 419 -102 246 254 14 28 chr17 10921228 10921299 -74517181 - MIR SINE MIR -94 114 45 2157 121 3 17 chr17 10921426 10921723 -74516757 - AluSx SINE Alu -19 293 1 21 36 0 0 chr17 10921723 10921751 -74516729 + AT_rich Low_complexity Low_complexity 1 28 0 3668 165 12 49 chr17 10921751 10922338 -74516142 - L1MB3 LINE L1 0 6183 5629 2233 108 0 0 chr17 10922338 10922633 -74515847 - AluSx SINE Alu -17 295 1 3668 165 12 49 chr17 10922633 10922797 -74515683 - L1MB3 LINE L1 -554 5629 5460 2166 69 0 4 chr17 10923706 10923967 -74514513 + AluY SINE Alu 37 296 -15 228 329 38 13 chr17 10924115 10924273 -74514207 - L2 LINE L2 -225 3047 2886 45 0 0 0 chr17 10924359 10924404 -74514076 + AT_rich Low_complexity Low_complexity 1 45 0 2301 97 0 0 chr17 10924404 10924693 -74513787 + AluSg SINE Alu 1 289 -21 251 41 0 61 chr17 10924693 10924742 -74513738 - L1PA8 LINE L1 -1 6171 6126 * 1007 46 0 0 chr17 10924728 10924858 -74513622 + L1P3 LINE L1 5615 5744 -428 414 189 179 0 chr17 10925153 10925259 -74513221 - L1MB1 LINE L1 -38 6151 6027 678 280 75 51 chr17 10925533 10925905 -74512575 + L2 LINE L2 2933 3313 0 629 218 6 32 chr17 10926697 10926853 -74511627 - MLT1A1 LTR MaLR 0 365 214 198 288 41 0 chr17 10926855 10926928 -74511552 - MIR SINE MIR -158 104 29 2366 96 0 0 chr17 10926933 10927226 -74511254 - AluSg SINE Alu -17 293 1 595 264 86 84 chr17 10927762 10928250 -74510230 - MLT1J LTR MaLR -20 491 3 1863 171 37 100 chr17 10928410 10928519 -74509961 + MLT1D LTR MaLR 1 115 -390 2268 171 8 0 chr17 10928519 10928904 -74509576 + MLT1B LTR MaLR 1 388 -2 1863 171 37 100 chr17 10928904 10929332 -74509148 + MLT1D LTR MaLR 115 504 -1 209 351 34 34 chr17 10929352 10929500 -74508980 - L2 LINE L2 -1067 2247 2100 2143 126 0 0 chr17 10930938 10931239 -74507241 - AluSx SINE Alu -10 302 2 308 314 100 18 chr17 10931531 10931751 -74506729 + MIR SINE MIR 19 256 -6 550 285 168 14 chr17 10931948 10932162 -74506318 + MIR SINE MIR 16 262 0 2260 112 0 3 chr17 10936575 10936887 -74501593 - AluSx SINE Alu -1 311 1 670 297 38 0 chr17 10936916 10937101 -74501379 + MIR SINE MIR 59 250 -12 524 287 66 6 chr17 10937158 10937350 -74501130 - MIR SINE MIR -32 230 26 2298 112 3 0 chr17 10937439 10937735 -74500745 - AluSp SINE Alu -16 297 1 2511 96 0 0 chr17 10938085 10938398 -74500082 - AluSq SINE Alu 0 313 1 187 333 51 34 chr17 10939815 10939932 -74498548 + L3 LINE CR1 1222 1340 -237 195 297 47 0 chr17 10940100 10940164 -74498316 - MIR3 SINE MIR -50 158 92 450 29 44 0 chr17 10940581 10940649 -74497831 + (TCTA)n Simple_repeat Simple_repeat 2 72 0 567 278 78 22 chr17 10940984 10941214 -74497266 + MIR SINE MIR 20 262 0 213 245 57 0 chr17 10941214 10941267 -74497213 + MIR SINE MIR 96 151 -57 748 207 5 92 chr17 10941414 10941631 -74496849 - MER20 DNA MER1_type 0 219 22 199 356 87 9 chr17 10941657 10941772 -74496708 + L2 LINE L2 3132 3255 -17 1427 209 95 50 chr17 10941909 10942350 -74496130 + MLT1C LTR MaLR 7 467 0 672 223 102 51 chr17 10942660 10942819 -74495661 + L1ME3A LINE L1 5881 6061 -109 2405 81 3 3 chr17 10942819 10943116 -74495364 - AluSp SINE Alu -16 297 1 672 223 102 51 chr17 10943116 10943230 -74495250 + L1ME3A LINE L1 6061 6168 -2 308 256 66 33 chr17 10943231 10943352 -74495128 + L1MC5 LINE L1 7508 7632 -329 2078 241 98 39 chr17 10943699 10944090 -74494390 + L1ME2 LINE L1 4846 5213 -951 2048 130 3 20 chr17 10944090 10944389 -74494091 + AluSx SINE Alu 1 294 -18 2078 241 98 39 chr17 10944389 10945210 -74493270 + L1ME2 LINE L1 5213 6127 -37 2394 93 3 0 chr17 10945210 10945512 -74492968 - AluY SINE Alu -7 304 2 787 260 12 53 chr17 10945879 10946148 -74492332 - MIR SINE MIR 0 262 7 261 267 93 0 chr17 10946431 10946506 -74491974 - MIR SINE MIR -70 192 111 2343 100 3 0 chr17 10946527 10946826 -74491654 - AluSq SINE Alu -13 300 1 772 214 21 11 chr17 10947012 10947199 -74491281 + MER53 DNA DNA 1 189 0 349 253 11 21 chr17 10950203 10950298 -74488182 - MIR SINE MIR -10 252 159 387 238 69 75 chr17 10950312 10950472 -74488008 + MIR SINE MIR 74 232 -30 590 239 9 0 chr17 10950841 10950954 -74487526 + MER81 DNA DNA 1 114 0 1926 131 7 30 chr17 10951068 10951366 -74487114 - AluJb SINE Alu -21 291 1 22 0 0 0 chr17 10951502 10951524 -74486956 + AT_rich Low_complexity Low_complexity 1 22 0 251 129 129 59 chr17 10951530 10951615 -74486865 - L1MC5 LINE L1 -44 7917 7827 1021 129 19 57 chr17 10951645 10951705 -74486775 + Tigger2 DNA MER2_type 1 62 -2656 1774 174 7 3 chr17 10951705 10951998 -74486482 - AluJo SINE Alu -18 294 1 1021 129 19 57 chr17 10951998 10952146 -74486334 + Tigger2 DNA MER2_type 62 201 -2517 1926 99 64 32 chr17 10952146 10952428 -74486052 + AluY SINE Alu 1 291 -20 694 229 14 0 chr17 10952460 10952604 -74485876 + Tigger2 DNA MER2_type 2564 2709 -9 2013 150 7 3 chr17 10952821 10953128 -74485352 - AluJo SINE Alu -4 308 1 321 327 34 14 chr17 10953140 10953348 -74485132 - L1MC5 LINE L1 -371 7590 7379 218 300 50 12 chr17 10953362 10953442 -74485038 + L2 LINE L2 3172 3254 -18 2375 87 7 3 chr17 10953633 10953973 -74484507 - AluY SINE Alu 0 341 1 2653 147 10 77 chr17 10953973 10954559 -74483921 + LTR36 LTR ERV1 9 555 -56 225 0 0 0 chr17 10955132 10955157 -74483323 + (T)n Simple_repeat Simple_repeat 1 25 0 979 193 0 0 chr17 10956441 10956612 -74481868 + AluJb SINE Alu 130 300 -12 1929 142 0 10 chr17 10956665 10956954 -74481526 + AluSq SINE Alu 26 311 -2 216 233 0 0 chr17 10957030 10957103 -74481377 + (TGG)n Simple_repeat Simple_repeat 3 75 0 747 209 0 0 chr17 10957115 10957641 -74480839 + (TGG)n Simple_repeat Simple_repeat 1 526 0 338 346 0 0 chr17 10957682 10957818 -74480662 + (TGG)n Simple_repeat Simple_repeat 3 138 0 250 202 11 11 chr17 10957836 10957925 -74480555 + (TGG)n Simple_repeat Simple_repeat 1 89 0 2455 56 0 20 chr17 10958540 10958843 -74479637 - AluY SINE Alu -14 297 1 665 160 9 0 chr17 10958888 10958994 -74479486 - U6 snRNA snRNA 0 107 1 2281 114 0 3 chr17 10959496 10959794 -74478686 - AluSq SINE Alu -16 297 1 241 247 32 112 chr17 10960693 10960812 -74477668 + MIR3 SINE MIR 7 108 -127 4529 46 0 0 chr17 10960812 10961352 -74477128 - L1PA5 LINE L1 0 6154 5615 241 247 32 112 chr17 10961352 10961397 -74477083 + MIR3 SINE MIR 108 155 -80 225 247 161 0 chr17 10962268 10962349 -74476131 + L2 LINE L2 2067 2160 -1154 321 248 106 21 chr17 10963302 10963443 -74475037 - L2 LINE L2 -1 3312 3160 1155 333 105 20 chr17 10963460 10963613 -74474867 + L2 LINE L2 1920 2059 -1255 2139 132 30 48 chr17 10963613 10963984 -74474496 - THE1B LTR MaLR 0 364 1 1155 333 105 20 chr17 10963984 10964571 -74473909 + L2 LINE L2 2059 2723 -591 266 150 25 38 chr17 10964815 10964895 -74473585 + CT-rich Low_complexity Low_complexity 2 80 0 2375 150 36 20 chr17 10964899 10965338 -74473142 - L1MA9 LINE L1 -4 6308 5863 2755 96 0 3 chr17 10965338 10965694 -74472786 + THE1A LTR MaLR 1 355 0 230 228 38 13 chr17 10965936 10966015 -74472465 + MLT1L LTR MaLR 535 615 0 321 346 107 27 chr17 10966127 10966500 -74471980 + L2 LINE L2 2866 3268 -4 250 324 0 29 chr17 10966506 10966611 -74471869 - L2 LINE L2 -177 3095 2994 263 181 11 64 chr17 10967588 10967682 -74470798 + GA-rich Low_complexity Low_complexity 2 90 0 1582 236 64 18 chr17 10968002 10968338 -74470142 - MLT1D LTR MaLR -45 460 98 2008 132 76 20 chr17 10968338 10968680 -74469800 + THE1B LTR MaLR 4 364 0 1582 236 64 18 chr17 10968680 10968779 -74469701 - MLT1D LTR MaLR -407 98 5 291 238 140 20 chr17 10968923 10969031 -74469449 + MIR SINE MIR 46 162 -46 186 224 0 0 chr17 10969087 10969136 -74469344 + T-rich Low_complexity Low_complexity 3 51 0 3629 61 2 7 chr17 10969568 10970030 -74468450 - L1PA8 LINE L1 -1 6171 5712 316 297 142 7 chr17 10970448 10970596 -74467884 + MIR SINE MIR 23 190 -72 435 297 97 7 chr17 10971667 10971822 -74466658 + MIR SINE MIR 20 188 -74 1265 218 65 58 chr17 10973286 10973699 -74464781 + L1ME2 LINE L1 5740 6155 -9 2636 80 3 6 chr17 10973759 10974109 -74464371 - L1PA8A LINE L1 0 6131 5783 217 336 87 0 chr17 10974923 10975027 -74463453 - L2 LINE L2 -13 3259 3147 2397 95 20 0 chr17 10975131 10975435 -74463045 + AluSg SINE Alu 1 310 0 1600 149 45 31 chr17 10975919 10976207 -74462273 + AluJb SINE Alu 1 292 -20 543 235 31 43 chr17 10976216 10976378 -74462102 - MIR SINE MIR -26 236 77 353 274 39 92 chr17 10976679 10976832 -74461648 + L2 LINE L2 3123 3267 -5 192 379 19 10 chr17 10977835 10977938 -74460542 + L2 LINE L2 2932 3035 -237 435 314 65 53 chr17 10978269 10978607 -74459873 - MLT1H LTR MaLR -205 344 3 314 278 41 21 chr17 10978731 10978828 -74459652 + L2 LINE L2 3174 3272 0 222 292 45 45 chr17 10978823 10978912 -74459568 - L2 LINE L2 -25 3288 3200 * 305 255 101 43 chr17 10979849 10980037 -74458443 + MIR SINE MIR 64 262 0 404 299 37 49 chr17 10980112 10980276 -74458204 + MIR3 SINE MIR 10 171 -37 285 221 8 102 chr17 10981013 10981140 -74457340 + MIR3 SINE MIR 43 157 -51 * 351 161 12 12 chr17 10981125 10981206 -74457274 - L2 LINE L2 -2506 808 728 2008 157 0 0 chr17 10982044 10982343 -74456137 - AluSx SINE Alu -13 299 1 204 319 0 0 chr17 10982406 10982453 -74456027 + L2 LINE L2 3134 3180 -92 740 288 134 11 chr17 10982548 10982877 -74455603 - L2 LINE L2 -220 3093 2725 354 61 0 0 chr17 10982879 10982928 -74455552 + (GA)n Simple_repeat Simple_repeat 2 50 0 3776 279 85 30 chr17 10982960 10984871 -74453609 - L2 LINE L2 -950 2364 349 407 293 62 47 chr17 10984981 10985237 -74453243 + MIR SINE MIR 1 260 -2 406 278 88 16 chr17 10985282 10985476 -74453004 - L2 LINE L2 -2955 359 152 225 0 0 0 chr17 10986281 10986306 -74452174 + (T)n Simple_repeat Simple_repeat 1 25 0 269 284 30 0 chr17 10986349 10986416 -74452064 + Charlie8 DNA MER1_type 175 243 -2174 2383 92 16 3 chr17 10986460 10986766 -74451714 - AluSq SINE Alu -3 310 1 2888 136 45 0 chr17 10986840 10987303 -74451177 - L1PA16 LINE L1 -3 6163 5680 647 99 0 0 chr17 10987304 10987385 -74451095 - 5S rRNA rRNA -34 87 7 5680 158 6 62 chr17 10987386 10989080 -74449400 - L1PA16 LINE L1 -481 5685 4098 234 0 0 0 chr17 10989527 10989553 -74448927 + (TG)n Simple_repeat Simple_repeat 2 27 0 341 257 44 9 chr17 10989677 10989790 -74448690 + MIR SINE MIR 73 189 -73 317 280 58 111 chr17 10990277 10990520 -74447960 - L2 LINE L2 -12 3260 3031 318 160 0 0 chr17 10990520 10990570 -74447910 + MLT1A1 LTR MaLR 1 50 -315 4079 83 0 0 chr17 10990583 10991115 -74447365 - L1PA13 LINE L1 -2 6161 5630 1718 208 24 15 chr17 10991122 10991454 -74447026 + MLT1A1 LTR MaLR 31 365 0 257 327 26 9 chr17 10991454 10991567 -74446913 - L2 LINE L2 -237 3035 2921 2152 131 0 22 chr17 10992532 10992844 -74445636 + AluSx SINE Alu 3 307 -5 308 103 0 0 chr17 10993655 10993694 -74444786 + MER77 LTR ERV1 105 143 -462 * 2046 165 12 20 chr17 10993692 10994038 -74444442 + MER77 LTR ERV1 263 605 0 210 259 0 0 chr17 10994502 10994556 -74443924 + MIR SINE MIR 179 232 -30 1361 196 310 11 chr17 10994595 10994972 -74443508 + MLT2B1 LTR ERVL 1 490 -64 321 113 25 62 chr17 10995059 10995139 -74443341 + MLT2B1 LTR ERVL 442 518 -2 565 206 0 128 chr17 10995884 10995963 -74442517 + MER5B DNA MER1_type 1 88 -90 2043 92 43 7 chr17 10995963 10996245 -74442235 + AluSx SINE Alu 12 303 -9 565 206 0 128 chr17 10996245 10996369 -74442111 + MER5B DNA MER1_type 88 178 0 1239 147 13 9 chr17 10996919 10997144 -74441336 + L1MB4 LINE L1 5955 6180 0 308 240 21 21 chr17 10997172 10997268 -74441212 - L2 LINE L2 -274 2998 2903 6503 150 15 33 chr17 10997619 10997769 -74440711 - Ricksha_b DNA DNA -1600 1254 1103 2256 104 3 0 chr17 10997769 10998067 -74440413 + AluSg SINE Alu 1 299 -11 6503 150 15 33 chr17 10998067 10999047 -74439433 - Ricksha_b DNA DNA -1751 1103 143 2061 141 29 35 chr17 10999047 10999424 -74439056 - THE1C LTR MaLR 0 375 1 6503 150 15 33 chr17 10999424 10999436 -74439044 - Ricksha_b DNA DNA -2711 143 132 326 346 0 0 chr17 10999444 10999545 -74438935 + MIR3 SINE MIR 54 154 -54 2444 75 0 0 chr17 10999731 11000023 -74438457 + AluY SINE Alu 1 292 -19 320 227 0 0 chr17 11000448 11000514 -74437966 - MER117 DNA MER1_type -47 150 85 277 250 0 0 chr17 11001561 11001625 -74436855 + L1P4 LINE L1 5533 5596 -569 1731 147 10 51 chr17 11003135 11003448 -74435032 + AluJo SINE Alu 1 300 -12 240 293 0 0 chr17 11003508 11003566 -74434914 + L2 LINE L2 2236 2293 -1021 1182 262 86 33 chr17 11003868 11004437 -74434043 - HAL1 LINE L1 -818 1689 1091 7759 31 6 0 chr17 11004469 11005530 -74432950 - L1PA3 LINE L1 -3 6152 5090 7027 26 39 0 chr17 11005530 11006367 -74432113 + L1PA3 LINE L1 4223 5092 -1054 3013 168 11 2 chr17 11006635 11007164 -74431316 - L1MB3 LINE L1 0 6183 5650 953 194 12 0 chr17 11007170 11007335 -74431145 - FAM SINE Alu -8 167 1 2317 103 3 0 chr17 11008095 11008395 -74430085 + AluSx SINE Alu 1 301 -11 2167 108 4 0 chr17 11009018 11009297 -74429183 + AluSp SINE Alu 1 280 -33 193 29 59 0 chr17 11009299 11009333 -74429147 + (CAA)n Simple_repeat Simple_repeat 1 36 0 559 204 72 28 chr17 11009583 11009764 -74428716 - L1ME2 LINE L1 -19 6145 5957 939 246 36 71 chr17 11009792 11010288 -74428192 - PABL_B LTR ERV1 -42 625 3 2478 81 0 3 chr17 11010393 11010702 -74427778 - AluY SINE Alu -1 310 3 910 219 108 14 chr17 11010713 11010992 -74427488 - L1ME2 LINE L1 -260 5904 5600 313 279 87 33 chr17 11010996 11011179 -74427301 - L1ME2 LINE L1 -1712 4434 4242 2083 78 4 0 chr17 11011424 11011679 -74426801 - AluY SINE Alu -55 256 1 412 260 32 52 chr17 11011720 11011874 -74426606 - L2 LINE L2 -15 3298 3148 2192 108 47 0 chr17 11011936 11012232 -74426248 + AluSx SINE Alu 1 310 -2 2313 147 65 161 chr17 11012766 11013571 -74424909 - LTR8A LTR ERV1 0 727 1 201 271 0 153 chr17 11014210 11014257 -74424223 + L2 LINE L2 3192 3212 -101 763 228 68 55 chr17 11014257 11014476 -74424004 + MER58A DNA MER1_type 3 224 0 201 271 0 153 chr17 11014476 11014546 -74423934 + L2 LINE L2 3212 3291 -22 288 331 70 7 chr17 11014778 11014920 -74423560 + L2 LINE L2 3121 3271 -1 24 0 0 0 chr17 11015235 11015259 -74423221 + AT_rich Low_complexity Low_complexity 1 24 0 2334 86 10 22 chr17 11015259 11015572 -74422908 + AluSq SINE Alu 1 309 -4 180 0 0 0 chr17 11015572 11015592 -74422888 + (TA)n Simple_repeat Simple_repeat 2 21 0 1034 137 122 20 chr17 11015597 11015794 -74422686 - L1PB3 LINE L1 -7 6147 5931 535 235 61 0 chr17 11016086 11016218 -74422262 + L1M4 LINE L1 5597 5736 -438 7523 168 60 28 chr17 11016218 11017742 -74420738 + MER4B-int LTR ERV1 3090 4662 -2096 2219 163 62 71 chr17 11017759 11018263 -74420217 + MER4B-int LTR ERV1 5264 5814 -944 5534 78 24 25 chr17 11018263 11018389 -74420091 + MER4E LTR ERV1 1 126 -640 2250 119 6 0 chr17 11018389 11018700 -74419780 - AluSq SINE Alu 0 313 1 5534 78 24 25 chr17 11018700 11019340 -74419140 + MER4E LTR ERV1 126 766 0 2219 163 62 71 chr17 11019340 11019589 -74418891 + MER4B-int LTR ERV1 5814 6064 -694 2458 162 92 0 chr17 11019599 11020013 -74418467 + LTR47A LTR ERVL 1 452 0 2201 123 0 0 chr17 11020135 11020435 -74418045 - AluSx SINE Alu -12 300 1 3861 288 110 14 chr17 11022432 11024036 -74414444 + L2 LINE L2 10 1766 -1548 323 223 143 54 chr17 11024034 11024122 -74414358 - L2 LINE L2 -1390 1924 1823 * 2029 111 4 0 chr17 11024122 11024392 -74414088 + AluSg SINE Alu 39 309 -1 323 223 143 54 chr17 11024392 11024415 -74414065 - L2 LINE L2 -1491 1823 1803 677 256 135 19 chr17 11025313 11025579 -74412901 - MER102b DNA MER1_type -25 316 20 812 205 6 0 chr17 11025963 11026320 -74412160 + (CTCA)n Simple_repeat Simple_repeat 1 358 0 1045 268 89 33 chr17 11026327 11027036 -74411444 - L2 LINE L2 -3 3310 2642 519 60 0 0 chr17 11027036 11027103 -74411377 + (TA)n Simple_repeat Simple_repeat 2 68 0 2207 84 11 0 chr17 11027105 11027391 -74411089 - AluSc SINE Alu -20 289 1 1045 268 89 33 chr17 11027391 11027434 -74411046 - L2 LINE L2 -671 2642 2504 2526 66 0 28 chr17 11028262 11028582 -74409898 - AluY SINE Alu 0 311 1 180 259 86 0 chr17 11028720 11028778 -74409702 + MIR SINE MIR 124 186 -76 267 246 0 14 chr17 11029058 11029127 -74409353 + GA-rich Low_complexity Low_complexity 4 71 0 205 345 0 0 chr17 11030433 11030488 -74407992 - L2 LINE L2 -97 3175 3121 1148 312 101 26 chr17 11030565 11030807 -74407673 - L2 LINE L2 -428 2886 2663 2280 85 0 19 chr17 11030807 11031123 -74407357 - AluY SINE Alu -1 310 1 1148 312 101 26 chr17 11031123 11031674 -74406806 - L2 LINE L2 -651 2663 2034 540 313 0 12 chr17 11032131 11032291 -74406189 + MER5B DNA MER1_type 21 178 0 441 316 59 0 chr17 11033786 11033938 -74404542 - MIR SINE MIR -14 248 88 386 125 0 0 chr17 11033938 11033994 -74404486 - MER20 DNA MER1_type -163 56 1 2279 129 92 32 chr17 11034168 11034572 -74403908 - MSTA LTR MaLR 0 428 1 2065 267 25 15 chr17 11034574 11035094 -74403386 - MER69 DNA AcHobo -698 528 4 1814 113 3 93 chr17 11035858 11036212 -74402268 - AluSx SINE Alu 0 326 1 252 0 0 0 chr17 11036343 11036371 -74402109 + (TTTTA)n Simple_repeat Simple_repeat 2 29 0 287 287 78 0 chr17 11037706 11037821 -74400659 + MIR SINE MIR 13 137 -71 270 235 0 44 chr17 11037825 11037893 -74400587 - L2 LINE L2 -1 3271 3207 405 0 0 0 chr17 11038503 11038548 -74399932 + (TG)n Simple_repeat Simple_repeat 2 46 0 2152 111 7 0 chr17 11038548 11038836 -74399644 - AluSg1 SINE Alu -19 290 1 23 54 0 0 chr17 11038840 11038877 -74399603 + AT_rich Low_complexity Low_complexity 1 37 0 382 263 45 39 chr17 11039064 11039243 -74399237 - L1MC/D LINE L1 -1988 5820 5641 585 216 9 26 chr17 11039611 11039727 -74398753 + MER81 DNA DNA 1 114 0 2207 95 0 3 chr17 11041601 11041906 -74396574 + AluSc SINE Alu 1 304 0 183 405 13 0 chr17 11042375 11042454 -74396026 + L3 LINE CR1 1497 1576 -1 1834 174 9 22 chr17 11044331 11044647 -74393833 + AluJb SINE Alu 1 312 0 2398 104 4 21 chr17 11044658 11045372 -74393108 + AluY SINE Alu 1 310 -1 270 343 57 0 chr17 11046358 11046463 -74392017 - L2 LINE L2 -4 3268 3158 967 224 91 118 chr17 11046590 11047054 -74391426 + MLT1K LTR MaLR 133 583 -5 192 344 53 46 chr17 11047150 11047281 -74391199 - L2 LINE L2 -193 3079 2948 1966 127 30 23 chr17 11047302 11047602 -74390878 - AluSx SINE Alu -10 302 1 290 281 226 20 chr17 11047864 11048010 -74390470 + MER5B DNA MER1_type 3 178 0 508 314 71 51 chr17 11048164 11048514 -74389966 - L2 LINE L2 -7 3306 2950 * 1622 263 112 16 chr17 11048508 11049087 -74389393 - L2 LINE L2 -810 2504 1870 6880 234 36 46 chr17 11049286 11050446 -74388034 - L1MCa LINE L1 -1530 4896 3726 2031 122 4 0 chr17 11050446 11050761 -74387719 - AluSg1 SINE Alu 0 316 1 6880 234 36 46 chr17 11050761 11052195 -74386285 - L1MCa LINE L1 -2700 3726 2393 772 196 80 18 chr17 11052193 11052638 -74385842 - L1MCa LINE L1 -4236 2190 1289 * 1898 116 55 10 chr17 11052640 11052932 -74385548 - AluSx SINE Alu -7 305 1 213 276 17 0 chr17 11053116 11053174 -74385306 + GA-rich Low_complexity Low_complexity 2 60 0 486 246 84 18 chr17 11053325 11053555 -74384925 + MIR SINE MIR 11 262 0 2133 132 3 0 chr17 11053730 11054040 -74384440 - AluSq SINE Alu -2 311 1 1727 192 17 59 chr17 11054095 11054502 -74383978 - MLT1B LTR MaLR 0 390 1 263 185 0 37 chr17 11055068 11055122 -74383358 - L2 LINE L2 0 3313 3262 316 291 76 32 chr17 11055723 11055881 -74382599 + L2 LINE L2 3118 3282 -31 375 269 50 62 chr17 11056279 11056439 -74382041 + MER117 DNA MER1_type 11 168 -29 1307 236 20 16 chr17 11056558 11056907 -74381573 - L1ME1 LINE L1 0 6166 5820 536 0 16 0 chr17 11057072 11057136 -74381344 + (TCTA)n Simple_repeat Simple_repeat 2 66 0 494 294 59 11 chr17 11058457 11058644 -74379836 - MIR SINE MIR -38 224 29 1635 184 7 3 chr17 11058987 11059291 -74379189 - AluJo SINE Alu 0 305 1 455 286 78 10 chr17 11059299 11059491 -74378989 - L1ME3A LINE L1 -312 5858 5654 1200 279 74 24 chr17 11059500 11059526 -74378954 + MER20B DNA MER1_type 36 59 -724 2244 123 0 0 chr17 11059526 11059826 -74378654 - AluSx SINE Alu -12 300 1 1200 279 74 24 chr17 11059826 11060261 -74378219 + MER20B DNA MER1_type 59 520 -263 1756 150 18 47 chr17 11060293 11060708 -74377772 + L1MB3 LINE L1 5207 5609 -571 723 209 10 46 chr17 11060720 11060916 -74377564 + L1PBa LINE L1 6 194 -6669 9474 168 93 13 chr17 11060916 11064267 -74374213 + L1PBa LINE L1 906 4525 -2337 2098 161 6 8 chr17 11064270 11064605 -74373875 + L1MB3 LINE L1 5818 6153 -30 2489 66 0 3 chr17 11064605 11064908 -74373572 + AluY SINE Alu 1 302 -9 2098 161 6 8 chr17 11064908 11064927 -74373553 + L1MB3 LINE L1 6153 6171 -12 28 29 0 0 chr17 11064965 11065000 -74373480 + AT_rich Low_complexity Low_complexity 1 35 0 579 226 7 7 chr17 11065246 11065383 -74373097 + MER20B DNA MER1_type 647 783 0 444 313 28 28 chr17 11065383 11065597 -74372883 - L1ME3A LINE L1 -506 5656 5443 285 272 10 48 chr17 11065570 11065602 -74372878 - L1ME3A LINE L1 -1157 4989 4957 * 2088 166 82 20 chr17 11065602 11066005 -74372475 + MSTA LTR MaLR 1 428 0 285 272 10 48 chr17 11066005 11066075 -74372405 - L1ME3A LINE L1 -1189 4957 4891 1585 121 60 4 chr17 11066169 11066418 -74372062 - L1MA5A LINE L1 0 6297 6035 253 147 0 73 chr17 11066421 11066489 -74371991 - L1ME3A LINE L1 -1310 4836 4774 26 30 0 0 chr17 11066706 11066739 -74371741 + AT_rich Low_complexity Low_complexity 1 33 0 2047 191 14 19 chr17 11068019 11068386 -74370094 + MLT1A1 LTR MaLR 1 365 0 1080 256 78 80 chr17 11069041 11069565 -74368915 + L1MCa LINE L1 385 907 -5515 5906 160 49 14 chr17 11069598 11071529 -74366951 + L1PA16 LINE L1 1344 6961 0 2040 222 167 45 chr17 11071521 11072373 -74366107 + L1MCa LINE L1 2003 2958 -3983 * 557 141 0 0 chr17 11072365 11072450 -74366030 + L1PA11 LINE L1 6069 6153 -21 * 1068 299 53 14 chr17 11072492 11072980 -74365500 + L1MCa LINE L1 2960 3466 -3475 * 1633 174 317 27 chr17 11072976 11073499 -74364981 + L1MC3 LINE L1 5270 5944 -1841 216 23 23 47 chr17 11073523 11073566 -74364914 + (TA)n Simple_repeat Simple_repeat 1 42 0 199 0 0 61 chr17 11073636 11073669 -74364811 + (TA)n Simple_repeat Simple_repeat 2 32 0 23 0 0 0 chr17 11074218 11074241 -74364239 + AT_rich Low_complexity Low_complexity 1 23 0 2410 81 3 0 chr17 11074287 11074583 -74363897 - AluSp SINE Alu -16 297 1 235 333 39 0 chr17 11074620 11074698 -74363782 + HAL1 LINE L1 4 84 -2423 705 262 99 0 chr17 11074812 11075045 -74363435 + MLT1H1 LTR MaLR 293 548 -7 228 273 36 18 chr17 11075073 11075183 -74363297 + HAL1 LINE L1 2009 2120 -387 270 81 0 0 chr17 11075225 11075262 -74363218 + (TG)n Simple_repeat Simple_repeat 2 38 0 1309 229 114 35 chr17 11075317 11075789 -74362691 + MER39 LTR ERV1 21 707 0 2349 110 3 0 chr17 11075873 11076183 -74362297 - AluSx SINE Alu -1 311 1 347 349 8 0 chr17 11076447 11076576 -74361904 + MIR3 SINE MIR 48 177 -31 390 209 117 37 chr17 11076595 11076758 -74361722 + L1ME4a LINE L1 5718 5893 -228 191 268 18 0 chr17 11076938 11076994 -74361486 + L2 LINE L2 3035 3091 -181 1039 220 96 0 chr17 11077959 11078177 -74360303 + MER8 DNA MER2_type 1 239 0 2354 67 7 7 chr17 11078465 11078764 -74359716 - AluY SINE Alu -12 299 1 383 329 83 62 chr17 11078991 11079413 -74359067 + L2 LINE L2 2834 3264 -8 220 244 0 0 chr17 11079589 11079630 -74358850 - L2 LINE L2 -95 3177 3137 225 224 20 0 chr17 11080353 11080402 -74358078 + L2 LINE L2 3262 3311 -2 223 228 35 0 chr17 11081026 11081083 -74357397 + L2 LINE L2 2993 3051 -221 1124 201 14 151 chr17 11081485 11081547 -74356933 - MLT1A1 LTR MaLR 0 365 296 1959 138 3 0 chr17 11081547 11081864 -74356616 + AluSg SINE Alu 1 318 0 1124 201 14 151 chr17 11081864 11082223 -74356257 - MLT1A1 LTR MaLR -69 296 1 456 256 16 16 chr17 11083549 11083678 -74354802 + MLT1I LTR MaLR 275 403 -6 2675 165 4 29 chr17 11083733 11084212 -74354268 - MLT1C LTR MaLR 0 467 1 216 202 10 40 chr17 11084316 11084415 -74354065 + (TTATA)n Simple_repeat Simple_repeat 4 99 0 228 111 0 0 chr17 11085568 11085604 -74352876 + (CAAAA)n Simple_repeat Simple_repeat 3 38 0 245 300 14 0 chr17 11085858 11085928 -74352552 - MIR SINE MIR -113 149 79 271 279 67 10 chr17 11085973 11086077 -74352403 - L3 LINE CR1 -205 1372 1263 251 281 68 5 chr17 11086661 11086800 -74351680 - MIR3 SINE MIR -44 164 12 189 309 12 12 chr17 11086899 11086980 -74351500 + MIR SINE MIR 164 244 -18 658 327 52 22 chr17 11087177 11087584 -74350896 + L2 LINE L2 1941 2359 -955 2231 113 3 0 chr17 11087594 11087887 -74350593 + AluSq SINE Alu 1 294 -19 331 325 18 43 chr17 11087955 11088118 -74350362 - L2 LINE L2 0 3313 3155 486 266 57 13 chr17 11088131 11088289 -74350191 + L2 LINE L2 2378 2542 -772 33 0 0 0 chr17 11088791 11088824 -74349656 + AT_rich Low_complexity Low_complexity 1 33 0 332 191 16 0 chr17 11089640 11089703 -74348777 + MER69 DNA AcHobo 4 67 -2459 2320 93 0 13 chr17 11089936 11090249 -74348231 + AluSc SINE Alu 1 309 0 333 186 0 0 chr17 11090963 11091022 -74347458 - MER69 DNA AcHobo -2461 65 7 291 246 212 0 chr17 11092184 11092302 -74346178 - MER5A DNA MER1_type -1 188 46 347 169 14 0 chr17 11092327 11092398 -74346082 + MER5A DNA MER1_type 4 75 -114 1503 150 3 88 chr17 11092398 11092704 -74345776 + AluJo SINE Alu 2 281 -31 2498 83 0 0 chr17 11092704 11093003 -74345477 - AluY SINE Alu -11 300 1 295 149 0 0 chr17 11093038 11093085 -74345395 + MER5A DNA MER1_type 67 113 -76 2350 81 13 7 chr17 11094712 11095010 -74343470 - AluSg1 SINE Alu -9 300 1 246 95 0 0 chr17 11095868 11095910 -74342570 + (T)n Simple_repeat Simple_repeat 1 42 0 585 259 44 60 chr17 11096383 11096634 -74341846 - LTR33A LTR ERVL -2 521 275 567 0 0 0 chr17 11096704 11096767 -74341713 + (CTG)n Simple_repeat Simple_repeat 1 63 0 221 297 16 78 chr17 11096974 11097102 -74341378 - L2 LINE L2 -3 3269 3150 387 0 0 0 chr17 11097119 11097162 -74341318 + (T)n Simple_repeat Simple_repeat 1 43 0 184 219 0 0 chr17 11097740 11097781 -74340699 + MIR SINE MIR 87 127 -81 182 264 207 11 chr17 11098867 11098923 -74339557 - MER5A DNA MER1_type -7 182 138 2234 118 0 0 chr17 11098923 11099219 -74339261 + AluSx SINE Alu 1 296 -16 182 264 207 11 chr17 11099219 11099249 -74339231 - MER5A DNA MER1_type -51 138 79 194 318 56 9 chr17 11099518 11099625 -74338855 - MIR3 SINE MIR -1 207 96 403 225 116 29 chr17 11099848 11099986 -74338494 - Charlie8 DNA MER1_type -2267 150 1 2283 110 7 0 chr17 11100129 11100428 -74338052 + AluSq SINE Alu 1 301 -12 2085 242 99 25 chr17 11100752 11100969 -74337511 - L1ME3A LINE L1 -9 6161 5961 309 26 0 0 chr17 11100969 11101007 -74337473 + (TG)n Simple_repeat Simple_repeat 1 38 0 2085 242 99 25 chr17 11101007 11101749 -74336731 - L1ME3A LINE L1 -209 5961 5030 533 263 166 0 chr17 11101854 11102071 -74336409 + MIR SINE MIR 10 262 0 208 231 0 0 chr17 11102100 11102139 -74336341 + polypurine Low_complexity Low_complexity 3 41 0 540 224 180 12 chr17 11102572 11102733 -74335747 - MER5A DNA MER1_type -1 188 1 1652 185 64 0 chr17 11102742 11103040 -74335440 + MER58B DNA MER1_type 2 318 -23 5488 143 33 11 chr17 11103310 11104213 -74334267 + MER49 LTR ERV1 1 923 0 248 170 0 0 chr17 11104962 11105009 -74333471 - MIR SINE MIR -65 143 97 783 286 122 20 chr17 11105843 11106235 -74332245 + MLT1K LTR MaLR 100 531 -57 907 133 12 75 chr17 11106327 11106500 -74331980 + FRAM SINE Alu 2 163 -13 926 279 30 70 chr17 11107989 11108415 -74330065 + MLT1I LTR MaLR 1 409 0 5585 145 7 29 chr17 11110381 11110641 -74327839 + MER49 LTR ERV1 2 266 -657 2438 53 0 0 chr17 11110641 11110965 -74327515 + AluY SINE Alu 1 324 0 5585 145 7 29 chr17 11110965 11111645 -74326835 + MER49 LTR ERV1 266 923 0 198 143 0 0 chr17 11111774 11111809 -74326671 + (TTCA)n Simple_repeat Simple_repeat 4 38 0 1755 274 101 21 chr17 11111814 11112387 -74326093 - L2 LINE L2 -7 3306 2780 2094 104 30 0 chr17 11112387 11112656 -74325824 + AluSc SINE Alu 1 277 -32 1755 274 101 21 chr17 11112656 11113313 -74325167 - L2 LINE L2 -533 2780 1969 529 332 114 7 chr17 11114112 11114401 -74324079 + L2 LINE L2 2471 2790 -524 209 340 83 33 chr17 11114416 11114657 -74323823 + L2 LINE L2 3001 3253 -60 427 235 44 37 chr17 11115461 11115597 -74322883 - MER5B DNA MER1_type -25 153 17 238 209 0 0 chr17 11115619 11115662 -74322818 - MIR SINE MIR -56 152 110 284 243 78 19 chr17 11115689 11115792 -74322688 - HAL1b LINE L1 -614 734 626 373 218 10 59 chr17 11115959 11116060 -74322420 - MER5A DNA MER1_type -85 104 9 320 296 114 50 chr17 11116203 11116423 -74322057 + MLT1K LTR MaLR 283 516 -72 987 256 102 71 chr17 11116968 11117362 -74321118 - MLT1F LTR MaLR 0 542 137 1511 199 7 28 chr17 11117553 11117835 -74320645 - AluJb SINE Alu -36 276 1 2184 100 0 21 chr17 11119057 11119347 -74319133 + AluSg SINE Alu 1 283 -27 190 94 0 0 chr17 11119347 11119379 -74319101 + (CAA)n Simple_repeat Simple_repeat 2 180 0 2158 93 0 0 chr17 11119496 11119764 -74318716 - AluSq SINE Alu -45 268 1 243 0 0 0 chr17 11120580 11120607 -74317873 + (TG)n Simple_repeat Simple_repeat 1 27 0 246 356 78 47 chr17 11120880 11121200 -74317280 + L2 LINE L2 2943 3272 0 488 191 95 0 chr17 11121901 11122006 -74316474 - L1MA10 LINE L1 -16 6318 6204 2343 113 0 0 chr17 11122175 11122484 -74315996 - AluSc SINE Alu 0 309 1 3944 105 11 2 chr17 11123443 11123985 -74314495 + L1PB2 LINE L1 5601 6147 -4 2277 122 3 0 chr17 11123999 11124311 -74314169 + AluSq SINE Alu 1 313 0 1986 159 83 28 chr17 11124495 11124892 -74313588 + MSTA LTR MaLR 1 419 -9 1679 239 97 42 chr17 11124901 11125428 -74313052 - MLT1G LTR MaLR -12 578 23 940 185 0 34 chr17 11125432 11125610 -74312870 - FRAM SINE Alu -5 171 1 203 402 68 0 chr17 11125922 11126039 -74312441 + L2 LINE L2 3140 3264 -8 261 359 0 0 chr17 11126160 11126263 -74312217 + L3 LINE CR1 1231 1333 -244 834 254 11 16 chr17 11126711 11126900 -74311580 + MER5A DNA MER1_type 2 189 0 563 207 71 64 chr17 11127191 11127331 -74311149 + FLAM_A SINE Alu 1 141 -1 553 246 7 25 chr17 11127598 11127741 -74310739 - MIR SINE MIR -62 146 29 23 68 0 0 chr17 11128295 11128339 -74310141 + AT_rich Low_complexity Low_complexity 1 44 0 468 306 30 8 chr17 11128352 11128486 -74309994 + MIR SINE MIR 9 145 -117 1834 243 94 11 chr17 11128489 11129063 -74309417 - MLT2F LTR ERVL -3 660 2 21 71 0 0 chr17 11129358 11129400 -74309080 + AT_rich Low_complexity Low_complexity 1 42 0 22 0 0 0 chr17 11130165 11130187 -74308293 + AT_rich Low_complexity Low_complexity 1 22 0 883 282 24 12 chr17 11130438 11130693 -74307787 + MIR SINE MIR 2 259 -3 2890 7 0 0 chr17 11131694 11132003 -74306477 - AluYa5 SINE Alu -2 309 1 517 281 43 6 chr17 11132583 11132747 -74305733 + MIR SINE MIR 36 205 -57 321 305 26 26 chr17 11133651 11133805 -74304675 - MLT1I LTR MaLR -255 154 1 3540 157 21 116 chr17 11133934 11134152 -74304328 + L1MA10 LINE L1 5508 5745 -589 245 100 20 0 chr17 11134152 11134202 -74304278 + (CAAA)n Simple_repeat Simple_repeat 2 52 0 3540 157 21 116 chr17 11134202 11134894 -74303586 + L1MA10 LINE L1 5745 6331 -3 2097 128 7 0 chr17 11134903 11135200 -74303280 + AluSq SINE Alu 1 299 -14 2139 120 3 0 chr17 11135201 11135493 -74302987 + AluSg SINE Alu 1 293 -17 5996 15 8 0 chr17 11135544 11136192 -74302288 + L1PA4 LINE L1 5503 6155 0 256 185 0 0 chr17 11136213 11136258 -74302222 + MIR SINE MIR 106 150 -58 570 312 94 40 chr17 11136483 11137145 -74301335 + L2 LINE L2 2608 3313 0 1830 152 14 7 chr17 11137843 11138140 -74300340 + AluJb SINE Alu 1 299 -13 2653 154 16 5 chr17 11138573 11138996 -74299484 - MSTA LTR MaLR 0 428 1 369 62 0 0 chr17 11139225 11139273 -74299207 + (TG)n Simple_repeat Simple_repeat 1 48 0 399 279 39 102 chr17 11139332 11139586 -74298894 - MLT1K LTR MaLR -3 585 348 3553 127 27 35 chr17 11140194 11140785 -74297695 - LTR60 LTR ERV1 0 586 1 4065 207 41 32 chr17 11141091 11141945 -74296535 - MER21B LTR ERV1 -1 862 1 3119 143 109 107 chr17 11142328 11143051 -74295429 + LTR8A LTR ERV1 1 725 -2 260 332 54 38 chr17 11143403 11143716 -74294764 - L1M4 LINE L1 -1315 4831 4514 426 307 91 24 chr17 11143791 11144078 -74294402 - L1M4 LINE L1 -1637 4509 4204 292 193 108 24 chr17 11144192 11144275 -74294205 - HAL1b LINE L1 -923 425 336 225 345 212 0 chr17 11144503 11144616 -74293864 + MIR SINE MIR 4 140 -122 1954 252 59 66 chr17 11144616 11145126 -74293354 + L1MB5 LINE L1 3813 4325 -1821 5287 47 0 0 chr17 11145126 11145717 -74292763 + LTR10C LTR ERV1 1 591 0 1954 252 59 66 chr17 11145717 11146003 -74292477 + L1MB5 LINE L1 4325 4612 -1534 2275 99 0 0 chr17 11146003 11146297 -74292183 + AluY SINE Alu 1 294 -17 1954 252 59 66 chr17 11146297 11146843 -74291637 + L1MB5 LINE L1 4612 5072 -1074 2254 206 57 66 chr17 11146843 11147402 -74291078 - MLT2B3 LTR ERVL 0 554 1 1954 252 59 66 chr17 11147402 11147595 -74290885 + L1MB5 LINE L1 5072 5265 -881 1059 146 34 96 chr17 11147596 11147835 -74290645 + L1MB5 LINE L1 5943 6166 -8 * 4683 154 52 19 chr17 11147833 11148709 -74289771 + L1MB5 LINE L1 5270 6174 0 361 224 52 17 chr17 11148711 11148827 -74289653 + MIR SINE MIR 143 262 0 842 263 157 23 chr17 11149250 11149763 -74288717 - MLT2E LTR ERVL 0 628 1 2120 126 3 0 chr17 11149872 11150165 -74288315 + AluSg SINE Alu 1 294 -16 1601 209 81 88 chr17 11150424 11150991 -74287489 - MLT1F1 LTR MaLR 0 567 1 2348 91 3 0 chr17 11151515 11151812 -74286668 - AluSc SINE Alu -11 298 1 1308 237 28 31 chr17 11152372 11152726 -74285754 - MLT1A1 LTR MaLR 0 365 13 256 269 147 58 chr17 11152915 11153071 -74285409 - HAL1b LINE L1 -463 885 716 2147 124 79 22 chr17 11153179 11153534 -74284946 - THE1C LTR MaLR 0 375 1 2311 101 0 21 chr17 11153581 11153818 -74284662 + MER47A DNA MER2_type 37 266 -2057 2426 171 18 37 chr17 11153818 11154252 -74284228 - MSTB LTR MaLR 0 426 1 2311 101 0 21 chr17 11154252 11154351 -74284129 + MER47A DNA MER2_type 266 366 0 382 209 9 48 chr17 11154406 11154511 -74283969 - HAL1b LINE L1 -867 481 381 1668 276 37 54 chr17 11154536 11154755 -74283725 + MLT1E LTR MaLR 7 228 -365 1180 103 43 16 chr17 11154755 11154939 -74283541 + MER53 DNA DNA 1 189 0 1668 276 37 54 chr17 11154939 11155316 -74283164 + MLT1E LTR MaLR 228 593 0 2060 107 3 55 chr17 11155515 11155825 -74282655 - AluSq SINE Alu -19 294 1 1988 140 0 7 chr17 11156637 11156930 -74281550 + AluSx SINE Alu 1 291 -21 303 28 0 0 chr17 11156937 11156973 -74281507 + (TAAAA)n Simple_repeat Simple_repeat 5 40 0 2380 61 7 0 chr17 11157431 11157550 -74280930 + AluY SINE Alu 1 118 -193 549 0 0 0 chr17 11157550 11157611 -74280869 + (CA)n Simple_repeat Simple_repeat 2 62 0 2380 61 7 0 chr17 11157611 11157787 -74280693 + AluY SINE Alu 118 298 -13 728 367 38 10 chr17 11157796 11158188 -74280292 + HERV16 LTR ERVL 728 1130 -3866 336 266 64 104 chr17 11158177 11158290 -74280190 + HERV16 LTR ERVL 1246 1362 -4402 * 2610 149 26 33 chr17 11158290 11158491 -74279989 + MSTB LTR MaLR 1 202 -224 2080 94 42 3 chr17 11158491 11158778 -74279702 + AluSg SINE Alu 1 298 -12 2610 149 26 33 chr17 11158778 11159005 -74279475 + MSTB LTR MaLR 202 426 0 336 266 64 104 chr17 11159005 11159237 -74279243 + HERV16 LTR ERVL 1362 1577 -4187 1319 335 36 42 chr17 11159291 11160144 -74278336 + HERV16 LTR ERVL 1570 2417 -2579 1872 175 66 95 chr17 11160145 11160586 -74277894 - MSTC LTR MaLR 0 428 1 4093 250 97 48 chr17 11160592 11162173 -74276307 - MSTC-int LTR MaLR -5 1730 2 2271 194 21 39 chr17 11162177 11162611 -74275869 - MSTC LTR MaLR -2 426 1 755 329 62 23 chr17 11162631 11163063 -74275417 + HERV16 LTR ERVL 2471 2919 -2845 570 289 14 0 chr17 11163094 11163236 -74275244 + MER5A DNA MER1_type 36 179 -10 1167 320 83 52 chr17 11163237 11163605 -74274875 + HERV16 LTR ERVL 3097 3452 -1953 1868 210 20 83 chr17 11163605 11163710 -74274770 - MLT1D LTR MaLR 0 505 395 2021 60 24 0 chr17 11163710 11163960 -74274520 + AluY SINE Alu 39 294 -17 1868 210 20 83 chr17 11163960 11164393 -74274087 - MLT1D LTR MaLR -110 395 1 1167 320 83 52 chr17 11164393 11164523 -74273957 + HERV16 LTR ERVL 3452 3577 -1828 2384 171 0 11 chr17 11164523 11164892 -74273588 - MLT1A1 LTR MaLR 0 365 1 1167 320 83 52 chr17 11164892 11165806 -74272674 + HERV16 LTR ERVL 3577 4527 -878 767 301 69 45 chr17 11165941 11166389 -74272091 + HERV16 LTR ERVL 4779 5237 -527 1053 281 41 0 chr17 11166750 11167042 -74271438 + LTR16C LTR ERVL 186 489 -2 246 32 0 0 chr17 11167710 11167741 -74270739 + (TG)n Simple_repeat Simple_repeat 2 32 0 301 308 55 20 chr17 11167915 11168061 -74270419 - HERV16 LTR ERVL -4483 513 363 4761 25 4 2 chr17 11168162 11168688 -74269792 - L1PA4 LINE L1 -3 6152 5626 7441 26 9 0 chr17 11168689 11169790 -74268690 + L1PA4 LINE L1 4521 5628 -527 341 261 125 88 chr17 11170159 11170304 -74268176 - L1ME LINE L1 -326 5795 5657 2115 156 55 8 chr17 11170304 11170446 -74268034 - L1MA10 LINE L1 -18 6316 6182 345 47 0 0 chr17 11170446 11170489 -74267991 + (TG)n Simple_repeat Simple_repeat 2 44 0 2115 156 55 8 chr17 11170489 11170731 -74267749 - L1MA10 LINE L1 -152 6182 5914 341 261 125 88 chr17 11170731 11170880 -74267600 - L1ME LINE L1 -464 5657 5490 609 294 124 40 chr17 11170898 11171448 -74267032 - L2 LINE L2 -1014 2300 1705 1901 156 71 3 chr17 11171631 11171970 -74266510 - MLT1A1 LTR MaLR 0 365 4 221 186 0 0 chr17 11172271 11172314 -74266166 - L2 LINE L2 0 3313 3271 3332 173 29 3 chr17 11172389 11172979 -74265501 + MER6A DNA MER2_type 1 605 0 1879 89 3 3 chr17 11173142 11173432 -74265048 - THE1B LTR MaLR 0 364 1 241 245 0 88 chr17 11173883 11173985 -74264495 + C-rich Low_complexity Low_complexity 2 94 0 2304 53 3 59 chr17 11176977 11177311 -74261169 - AluY SINE Alu 0 317 1 3402 183 86 55 chr17 11177311 11177921 -74260559 - L1MC3 LINE L1 -158 7627 6981 1919 138 3 7 chr17 11177921 11178203 -74260277 + AluJo SINE Alu 7 287 -25 3402 183 86 55 chr17 11178203 11178462 -74260018 - L1MC3 LINE L1 -804 6981 6731 2360 79 0 16 chr17 11179215 11179530 -74258950 - AluY SINE Alu -1 310 1 25 0 0 0 chr17 11180048 11180073 -74258407 + AT_rich Low_complexity Low_complexity 1 25 0 2182 82 4 0 chr17 11180092 11180362 -74258118 + AluSq SINE Alu 26 296 -17 1604 153 60 14 chr17 11180891 11181172 -74257308 - AluJo SINE Alu -12 300 7 185 143 14 57 chr17 11182756 11182826 -74255654 + GA-rich Low_complexity Low_complexity 3 69 0 1198 131 0 0 chr17 11184588 11184756 -74253724 - Charlie3 DNA MER1_type -2540 170 3 477 312 103 55 chr17 11186602 11187019 -74251461 - MLT1K LTR MaLR -31 557 121 497 241 12 80 chr17 11187851 11188013 -74250467 - MER117 DNA MER1_type -32 165 15 202 250 0 17 chr17 11189002 11189039 -74249441 + (TAA)n Simple_repeat Simple_repeat 3 40 -21 3502 123 111 2 chr17 11189039 11189625 -74248855 - MER39B LTR ERV1 0 653 4 202 250 0 17 chr17 11189625 11189647 -74248833 + (TAA)n Simple_repeat Simple_repeat 40 61 0 882 265 83 66 chr17 11191301 11191690 -74246790 - MLT1G LTR MaLR -190 400 4 926 271 69 45 chr17 11192210 11192760 -74245720 + HAL1 LINE L1 1070 1632 -875 507 109 40 10 chr17 11192761 11192862 -74245618 + GA-rich Low_complexity Low_complexity 1 104 0 277 211 0 0 chr17 11194111 11194163 -74244317 + LTR30 LTR ERV1 1 52 -670 1411 102 7 136 chr17 11194163 11194513 -74243967 + LTR12 LTR ERV1 53 289 -425 250 265 0 0 chr17 11194513 11194581 -74243899 + LTR30 LTR ERV1 556 623 -99 698 172 26 0 chr17 11194585 11194701 -74243779 + LTR12 LTR ERV1 362 480 -234 2758 99 0 0 chr17 11194957 11195320 -74243160 + THE1B LTR MaLR 2 364 0 180 0 0 0 chr17 11195673 11195693 -74242787 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 2431 74 0 0 chr17 11195772 11196068 -74242412 + AluY SINE Alu 1 296 -15 243 125 0 0 chr17 11196737 11196777 -74241703 + (A)n Simple_repeat Simple_repeat 1 40 0 1018 263 36 65 chr17 11197295 11197838 -74240642 + MER50 LTR ERV1 1 577 -157 205 316 26 13 chr17 11197972 11198048 -74240432 - L2 LINE L2 -16 3297 3221 216 0 0 0 chr17 11198197 11198221 -74240259 + (T)n Simple_repeat Simple_repeat 1 24 0 182 318 82 59 chr17 11198387 11198557 -74239923 - L2 LINE L2 -505 2809 2636 1634 187 81 9 chr17 11198922 11199269 -74239211 + MLT1C LTR MaLR 1 372 -95 1611 84 0 24 chr17 11199269 11199482 -74238998 - AluSx SINE Alu -18 292 85 673 128 0 20 chr17 11199723 11199825 -74238655 - AluSx SINE Alu -212 101 2 551 206 0 0 chr17 11199825 11199932 -74238548 + MLT1C LTR MaLR 361 467 0 326 213 105 133 chr17 11199940 11200226 -74238254 + L2 LINE L2 3035 3312 -1 997 258 66 23 chr17 11200342 11200734 -74237746 - MLT1G LTR MaLR -200 390 13 192 323 101 30 chr17 11200783 11200882 -74237598 + MER5A DNA MER1_type 61 166 -23 2641 55 0 0 chr17 11201335 11201642 -74236838 + AluY SINE Alu 1 307 -4 1803 119 23 8 chr17 11202135 11202395 -74236085 + AluSx SINE Alu 35 298 -14 407 301 46 0 chr17 11203142 11203295 -74235185 - MIR3 SINE MIR -8 200 41 361 271 0 21 chr17 11203923 11204019 -74234461 - MIR3 SINE MIR -2 206 113 4404 67 0 21 chr17 11204194 11204760 -74233720 - MER41A LTR ERV1 0 554 1 317 246 0 0 chr17 11205573 11205634 -74232846 + L2 LINE L2 3193 3253 -19 336 24 0 0 chr17 11205634 11205675 -74232805 + (TGAA)n Simple_repeat Simple_repeat 4 44 0 2704 215 21 66 chr17 11205779 11206487 -74231993 - LTR8 LTR ERV1 0 691 16 292 287 73 22 chr17 11206629 11206765 -74231715 + MIR3 SINE MIR 49 191 -17 265 294 28 0 chr17 11207295 11207404 -74231076 - MER103 DNA DNA -47 119 8 257 253 22 22 chr17 11208443 11208534 -74229946 - L1ME4a LINE L1 -67 6054 5964 297 291 73 24 chr17 11209399 11209564 -74228916 - L1ME4a LINE L1 -71 6050 5878 263 130 0 19 chr17 11209557 11209611 -74228869 - L1ME4a LINE L1 -2 6119 6067 * 287 248 126 29 chr17 11209697 11209903 -74228577 - L1ME4a LINE L1 -2 6119 5894 2221 125 0 6 chr17 11210117 11210429 -74228051 - AluSg SINE Alu 0 310 1 843 153 45 86 chr17 11210797 11211019 -74227461 - L1MA10 LINE L1 -2 6332 6120 2351 55 3 45 chr17 11211020 11211329 -74227151 - AluY SINE Alu -15 296 1 1167 60 0 0 chr17 11211329 11211463 -74227017 - AluSg SINE Alu -176 134 1 2704 164 17 29 chr17 11211463 11211764 -74226716 - L1MB1 LINE L1 -38 6130 5827 2416 86 0 0 chr17 11211764 11212055 -74226425 - AluSc SINE Alu -17 292 2 2704 164 17 29 chr17 11212055 11212244 -74226236 - L1MB1 LINE L1 -341 5827 5643 2044 119 3 7 chr17 11212244 11212564 -74225916 + AluSq SINE Alu 1 319 0 2704 164 17 29 chr17 11212564 11212589 -74225891 - L1MB1 LINE L1 -525 5643 5619 334 217 88 35 chr17 11212603 11212779 -74225701 - L1MB1 LINE L1 -721 5445 5255 2062 103 14 17 chr17 11213207 11213499 -74224981 - AluSx SINE Alu 0 312 22 2532 52 3 7 chr17 11213734 11214041 -74224439 + AluY SINE Alu 1 306 -5 2452 228 72 15 chr17 11214277 11214568 -74223912 - L1ME3A LINE L1 -2 6160 5887 2362 54 7 0 chr17 11214568 11214870 -74223610 - AluY SINE Alu 0 304 1 2452 228 72 15 chr17 11214870 11215337 -74223143 - L1ME3A LINE L1 -275 5887 5324 199 308 47 83 chr17 11215373 11215542 -74222938 - MIR SINE MIR -45 217 55 182 318 0 30 chr17 11215603 11215669 -74222811 - L2 LINE L2 -21 3251 3188 605 303 34 0 chr17 11215848 11216056 -74222424 + MIR SINE MIR 31 245 -17 714 285 55 40 chr17 11216676 11217079 -74221401 - MER113 DNA MER1_type? -43 478 70 332 330 131 5 chr17 11217216 11217422 -74221058 + MIR SINE MIR 19 250 -12 547 134 10 62 chr17 11217627 11217724 -74220756 - FRAM SINE Alu -62 114 23 548 144 0 0 chr17 11217900 11217990 -74220490 - AluSp/q SINE Alu -1 312 223 1254 54 6 18 chr17 11219514 11219681 -74218799 - L1PA5 LINE L1 -2 6152 5988 1250 76 0 0 chr17 11219682 11219840 -74218640 + L1PA6 LINE L1 5742 5899 -255 2313 84 0 7 chr17 11219979 11220297 -74218183 + AluY SINE Alu 3 311 0 715 267 20 0 chr17 11220369 11220564 -74217916 + MIR SINE MIR 64 262 0 508 283 26 125 chr17 11221460 11221497 -74216983 - L2 LINE L2 0 3313 3274 1467 176 68 102 chr17 11221497 11221890 -74216590 + MSTC LTR MaLR 1 379 -49 2368 66 0 23 chr17 11221890 11222194 -74216286 + AluY SINE Alu 1 297 -14 1467 176 68 102 chr17 11222194 11222243 -74216237 + MSTC LTR MaLR 379 428 0 508 283 26 125 chr17 11222243 11222808 -74215672 - L2 LINE L2 -39 3274 2760 209 321 112 98 chr17 11222850 11223074 -74215406 + L2 LINE L2 2971 3201 -71 2279 112 0 0 chr17 11223074 11223370 -74215110 - AluSx SINE Alu -16 296 1 209 321 112 98 chr17 11223370 11223441 -74215039 + L2 LINE L2 3201 3270 -2 317 320 20 0 chr17 11223985 11224085 -74214395 - L2 LINE L2 -14 3299 3198 226 343 29 29 chr17 11224270 11224407 -74214073 + MIR SINE MIR 16 152 -56 4076 79 2 2 chr17 11226189 11226718 -74211762 + MER41A LTR ERV1 1 529 -25 374 344 47 27 chr17 11227258 11227514 -74210966 - MIR SINE MIR 0 262 2 2338 77 0 0 chr17 11228107 11228394 -74210086 - AluY SINE Alu -1 310 24 1211 224 0 73 chr17 11229216 11229481 -74208999 - L1ME2 LINE L1 -260 5904 5666 2258 101 3 0 chr17 11229481 11229777 -74208703 - AluSc SINE Alu -12 297 1 1211 224 0 73 chr17 11229777 11229841 -74208639 - L1ME2 LINE L1 -498 5666 5599 277 200 12 50 chr17 11229842 11229922 -74208558 + LTR67 LTR ERVL 481 557 0 236 309 15 0 chr17 11229951 11230019 -74208461 - L2 LINE L2 -17 3255 3187 334 305 107 19 chr17 11230258 11230520 -74207960 + L1ME4a LINE L1 5766 6050 -71 2164 84 6 40 chr17 11230525 11230847 -74207633 - AluY SINE Alu 0 311 1 2531 58 0 3 chr17 11230956 11231268 -74207212 - AluY SINE Alu 0 311 1 2157 229 96 10 chr17 11231659 11232252 -74206228 - LTR48B LTR ERV1 0 644 1 1272 85 0 0 chr17 11233594 11233758 -74204722 + AluY SINE Alu 132 295 -16 625 287 45 0 chr17 11234223 11234425 -74204055 + MIR SINE MIR 46 256 -6 198 71 0 0 chr17 11234532 11234560 -74203920 + (T)n Simple_repeat Simple_repeat 1 28 0 12557 97 7 2 chr17 11234867 11237348 -74201132 - L1PA8 LINE L1 -2 6485 4009 540 0 0 0 chr17 11237348 11237408 -74201072 + (TA)n Simple_repeat Simple_repeat 2 61 0 12557 97 7 2 chr17 11237408 11237427 -74201053 - L1PA8 LINE L1 -2478 4009 3992 12722 146 9 25 chr17 11237427 11240084 -74198396 - L1PA8 LINE L1 -3301 3160 521 616 128 0 0 chr17 11240072 11240158 -74198322 - L1PA8 LINE L1 -6365 96 11 * 3721 141 26 38 chr17 11240224 11240886 -74197594 - L1MC1 LINE L1 -2 6331 5678 369 197 162 17 chr17 11240891 11241008 -74197472 + MIR3 SINE MIR 4 137 -71 826 118 15 7 chr17 11241062 11241197 -74197283 - MSTA-int LTR MaLR -1515 136 1 2302 161 51 5 chr17 11241197 11241493 -74196987 - MSTA LTR MaLR 0 428 108 4320 109 11 88 chr17 11241493 11242190 -74196290 - LTR9B LTR ERV1 0 644 1 2302 161 51 5 chr17 11242190 11242285 -74196195 - MSTA LTR MaLR -320 108 19 1458 252 26 26 chr17 11242418 11242842 -74195638 - L1ME3A LINE L1 -219 6020 5597 864 248 37 17 chr17 11242887 11243294 -74195186 - L1ME3A LINE L1 -628 5605 5191 180 111 0 0 chr17 11243337 11243364 -74195116 + (GA)n Simple_repeat Simple_repeat 1 27 0 1653 188 3 7 chr17 11243377 11243680 -74194800 + AluJb SINE Alu 3 304 -8 898 207 131 125 chr17 11243681 11243912 -74194568 - L1MEc LINE L1 -3578 2637 2409 2179 157 64 43 chr17 11243912 11244151 -74194329 - MSTB1 LTR MaLR 0 432 179 2268 117 0 0 chr17 11244151 11244459 -74194021 + AluSg SINE Alu 1 308 -2 2179 157 64 43 chr17 11244459 11244639 -74193841 - MSTB1 LTR MaLR -253 179 4 898 207 131 125 chr17 11244639 11244928 -74193552 - L1MEc LINE L1 -3806 2409 2149 24 0 0 0 chr17 11245125 11245149 -74193331 + AT_rich Low_complexity Low_complexity 1 24 0 1268 144 0 42 chr17 11245176 11245391 -74193089 + Tigger2a DNA MER2_type 1 206 -228 2457 91 0 0 chr17 11245453 11245762 -74192718 - AluY SINE Alu -2 309 1 1543 201 81 0 chr17 11245771 11246055 -74192425 - 7SLRNA srpRNA srpRNA -13 307 1 1585 161 0 0 chr17 11246055 11246297 -74192183 + Tigger2a DNA MER2_type 193 434 0 337 308 81 29 chr17 11246311 11246629 -74191851 - L1M2 LINE L1 -4304 1912 1512 585 288 70 41 chr17 11246639 11246865 -74191615 + MLT1I LTR MaLR 12 244 -165 329 244 30 92 chr17 11246865 11247029 -74191451 - LTR16B LTR ERVL 0 464 311 2306 97 0 10 chr17 11247099 11247398 -74191082 + AluSc SINE Alu 5 300 -9 2045 138 0 6 chr17 11247708 11248019 -74190461 - AluSx SINE Alu -3 309 1 325 303 53 5 chr17 11248290 11248478 -74190002 - L1MEd LINE L1 -5028 1091 895 2181 117 7 0 chr17 11248868 11249166 -74189314 + AluSq SINE Alu 1 300 -13 196 170 38 0 chr17 11249444 11249497 -74188983 + (TA)n Simple_repeat Simple_repeat 1 55 0 201 39 0 0 chr17 11249812 11249838 -74188642 + (TG)n Simple_repeat Simple_repeat 2 27 0 358 264 21 42 chr17 11249854 11249998 -74188482 - LTR67 LTR ERVL -10 547 407 874 249 57 10 chr17 11251389 11251598 -74186882 + MER20 DNA MER1_type 1 219 0 182 309 15 29 chr17 11251623 11251691 -74186789 - L2 LINE L2 -6 3307 3241 4038 144 53 40 chr17 11251942 11252620 -74185860 + LTR12 LTR ERV1 1 687 -1 1457 137 18 0 chr17 11252624 11252850 -74185630 + LTR12 LTR ERV1 485 714 0 201 260 0 55 chr17 11253244 11253317 -74185163 - L2 LINE L2 -207 3065 2997 2310 82 3 3 chr17 11254823 11255128 -74183352 - AluSq SINE Alu -8 305 1 22 0 0 0 chr17 11255133 11255155 -74183325 + AT_rich Low_complexity Low_complexity 1 22 0 1724 160 22 116 chr17 11256358 11256771 -74181709 + MLT1A2 LTR MaLR 1 374 0 1823 218 34 22 chr17 11256813 11257226 -74181254 - LTR52 LTR ERVL -3 418 1 792 282 61 43 chr17 11257292 11257735 -74180745 - LTR16B LTR ERVL -11 453 3 851 281 34 43 chr17 11257765 11258114 -74180366 + MARNA DNA Mariner 141 486 -100 518 238 0 0 chr17 11258245 11258350 -74180130 + MER69A DNA AcHobo 60 164 -13 288 271 131 25 chr17 11259019 11259141 -74179339 + MIR3 SINE MIR 40 174 -34 1041 193 33 20 chr17 11259315 11259559 -74178921 + L1MCa LINE L1 12 258 -6168 2190 178 67 13 chr17 11259560 11260026 -74178454 + L1MCa LINE L1 778 1268 -5158 309 102 20 0 chr17 11260754 11260803 -74177677 + MADE1 DNA Mariner 31 80 0 421 362 30 25 chr17 11260816 11261015 -74177465 + L2 LINE L2 2870 3069 -203 217 254 0 0 chr17 11261268 11261323 -74177157 + A-rich Low_complexity Low_complexity 1 55 0 2326 112 0 0 chr17 11261490 11261794 -74176686 + AluSx SINE Alu 3 306 -6 1743 204 20 14 chr17 11261854 11262211 -74176269 + MLT1A2 LTR MaLR 16 374 0 236 302 135 32 chr17 11262233 11262485 -74175995 - HAL1 LINE L1 -83 2424 2147 302 317 90 18 chr17 11262545 11262628 -74175852 - MLT1J LTR MaLR -106 405 329 315 71 0 0 chr17 11262628 11262670 -74175810 + (TG)n Simple_repeat Simple_repeat 2 43 0 302 317 90 18 chr17 11262670 11262753 -74175727 - MLT1J LTR MaLR -182 329 227 1180 236 108 87 chr17 11262943 11263634 -74174846 - HAL1 LINE L1 -344 2163 1458 2347 177 135 9 chr17 11263660 11264111 -74174369 - MLT2B2 LTR ERVL 0 515 8 328 278 98 46 chr17 11264117 11264311 -74174169 - HAL1 LINE L1 -1067 1440 1237 870 248 87 63 chr17 11264315 11264808 -74173672 - HAL1 LINE L1 -1323 1184 680 465 305 71 66 chr17 11264874 11265281 -74173199 - HAL1 LINE L1 -1938 569 161 1959 190 32 0 chr17 11266826 11267174 -74171306 + MLT1A1 LTR MaLR 6 364 -1 643 217 64 35 chr17 11267346 11267549 -74170931 - MLT1J2 LTR MaLR -241 209 1 568 302 21 21 chr17 11267667 11267856 -74170624 - MER5A DNA MER1_type 0 189 1 535 204 47 29 chr17 11268079 11268251 -74170229 + MER104 DNA MER2_type 3 177 -3 2150 88 10 17 chr17 11269797 11270124 -74168356 - AluY SINE Alu 0 311 1 2347 97 0 0 chr17 11270381 11270690 -74167790 + AluSg SINE Alu 1 309 -1 198 143 0 0 chr17 11270697 11270732 -74167748 + (A)n Simple_repeat Simple_repeat 1 35 0 193 128 43 0 chr17 11271065 11271112 -74167368 + (TA)n Simple_repeat Simple_repeat 2 50 0 241 163 23 47 chr17 11271141 11271201 -74167279 + (TA)n Simple_repeat Simple_repeat 2 82 0 23 0 0 0 chr17 11271201 11271224 -74167256 + AT_rich Low_complexity Low_complexity 1 23 0 5360 146 30 42 chr17 11271271 11271838 -74166642 + L1MA4 LINE L1 5254 5826 -474 1766 90 0 9 chr17 11271838 11272071 -74166409 + AluSc SINE Alu 79 309 0 5360 146 30 42 chr17 11272071 11272424 -74166056 + L1MA4 LINE L1 5826 6163 -137 540 98 0 24 chr17 11272424 11272506 -74165974 + MADE1 DNA Mariner 1 80 0 5360 146 30 42 chr17 11272506 11272640 -74165840 + L1MA4 LINE L1 6163 6297 -3 2074 141 144 5 chr17 11272804 11273179 -74165301 + MSTA LTR MaLR 2 428 0 3610 211 54 6 chr17 11273326 11274549 -74163931 - L1MB7 LINE L1 -9 6175 4896 3949 144 13 49 chr17 11274554 11274790 -74163690 - L1MB3 LINE L1 -3 6180 5937 1901 170 18 42 chr17 11274790 11275190 -74163290 + MLT1B LTR MaLR 1 390 0 3949 144 13 49 chr17 11275190 11275363 -74163117 - L1MB3 LINE L1 -246 5937 5759 4066 190 38 49 chr17 11275363 11276233 -74162247 + MER21B LTR ERV1 3 862 -1 3949 144 13 49 chr17 11276233 11276580 -74161900 - L1MB3 LINE L1 -424 5759 5450 222 37 0 0 chr17 11276593 11276620 -74161860 + (TTCC)n Simple_repeat Simple_repeat 2 28 0 1225 73 17 0 chr17 11276632 11276809 -74161671 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 2017 146 3 7 chr17 11276835 11277137 -74161343 - AluJb SINE Alu -11 301 1 1011 306 135 34 chr17 11277153 11277360 -74161120 + L2 LINE L2 1984 2169 -1144 2330 58 0 64 chr17 11277360 11277672 -74160808 - AluY SINE Alu -15 296 5 1011 306 135 34 chr17 11277672 11278641 -74159839 + L2 LINE L2 2169 3264 -49 1998 140 3 0 chr17 11278694 11278980 -74159500 + AluSx SINE Alu 1 287 -25 188 35 35 0 chr17 11279629 11279658 -74158822 + (TG)n Simple_repeat Simple_repeat 2 31 0 295 343 53 34 chr17 11279729 11279994 -74158486 - L2 LINE L2 -525 2789 2520 805 302 106 22 chr17 11280707 11281158 -74157322 + LTR33 LTR ERVL 25 513 -8 2600 138 10 0 chr17 11281746 11282145 -74156335 + MER57A LTR ERV1 1 403 0 452 165 11 0 chr17 11282815 11282906 -74155574 + (TA)n Simple_repeat Simple_repeat 2 93 0 2019 119 0 41 chr17 11282927 11283125 -74155355 - AluSx SINE Alu 0 323 141 2246 112 3 0 chr17 11283125 11283420 -74155060 - AluSx SINE Alu -16 296 1 2019 119 0 41 chr17 11283420 11283556 -74154924 - AluSx SINE Alu -182 141 1 26 0 0 0 chr17 11283730 11283756 -74154724 + AT_rich Low_complexity Low_complexity 1 26 0 2482 71 3 3 chr17 11284011 11284322 -74154158 - AluY SINE Alu 0 311 1 4750 157 8 22 chr17 11284323 11285128 -74153352 - MER54B LTR ERVL 0 793 1 716 301 66 38 chr17 11285222 11285541 -74152939 - MLT1J2 LTR MaLR -3 447 120 2194 105 10 3 chr17 11285542 11285837 -74152643 + AluSq SINE Alu 1 297 -16 1759 163 4 7 chr17 11286333 11286610 -74151870 - AluJo SINE Alu -32 280 5 1713 194 0 3 chr17 11286639 11286922 -74151558 + AluJo SINE Alu 1 282 -30 305 313 114 0 chr17 11287096 11287227 -74151253 + L2 LINE L2 2622 2767 -547 2431 68 7 0 chr17 11287250 11287543 -74150937 - AluSc SINE Alu -14 295 1 268 304 27 93 chr17 11287730 11287987 -74150493 + L2 LINE L2 2918 3157 -115 912 222 129 73 chr17 11288022 11288463 -74150017 - LTR50 LTR ERVL 0 795 330 2231 47 4 25 chr17 11288503 11288779 -74149701 + AluY SINE Alu 32 301 -10 277 247 353 0 chr17 11288780 11288930 -74149550 - LTR50 LTR ERVL -581 214 12 2419 93 0 0 chr17 11289019 11289357 -74149123 + AluSg SINE Alu 1 338 0 1640 166 0 42 chr17 11290471 11290807 -74147673 + AluJb SINE Alu 11 333 0 2387 73 0 0 chr17 11291067 11291354 -74147126 + AluY SINE Alu 1 287 -24 431 302 54 15 chr17 11291510 11291715 -74146765 + HAL1b LINE L1 293 505 -843 348 167 0 0 chr17 11291900 11291954 -74146526 - MLT1A1 LTR MaLR 0 365 312 32 33 0 33 chr17 11291954 11291979 -74146501 + AT_rich Low_complexity Low_complexity 1 25 -34 2305 127 0 0 chr17 11291979 11292287 -74146193 - AluSg SINE Alu -2 308 1 32 33 0 33 chr17 11292287 11292322 -74146158 + AT_rich Low_complexity Low_complexity 25 59 0 3010 69 13 2 chr17 11292325 11292718 -74145762 - L1PA8 LINE L1 -10 6162 5766 1341 205 94 7 chr17 11292720 11293018 -74145462 - MLT1A1 LTR MaLR -41 324 1 242 274 10 10 chr17 11293073 11293148 -74145332 + (TAA)n Simple_repeat Simple_repeat 3 80 -24 1956 88 3 100 chr17 11293148 11293467 -74145013 + AluSx SINE Alu 1 288 -24 242 274 10 10 chr17 11293467 11293493 -74144987 + (TAA)n Simple_repeat Simple_repeat 79 104 0 2582 49 3 3 chr17 11293670 11293978 -74144502 - AluY SINE Alu -3 308 1 409 240 182 0 chr17 11294098 11294252 -74144228 - MER5A DNA MER1_type -1 188 7 450 271 8 42 chr17 11296161 11296279 -74142201 + MER81 DNA DNA 1 114 0 1448 196 50 0 chr17 11296821 11297102 -74141378 - AluJo SINE Alu -2 310 16 21 0 0 0 chr17 11297885 11297906 -74140574 + AT_rich Low_complexity Low_complexity 1 21 0 256 217 98 22 chr17 11297911 11298003 -74140477 + L1MC4 LINE L1 7928 8026 -16 21 0 0 0 chr17 11298014 11298035 -74140445 + AT_rich Low_complexity Low_complexity 1 21 0 381 266 56 14 chr17 11298694 11298837 -74139643 - MLT1L LTR MaLR -2 613 465 808 22 0 0 chr17 11298837 11298929 -74139551 - L1PA4 LINE L1 -215 5940 5849 1406 18 18 0 chr17 11298929 11299097 -74139383 + L1PA4 LINE L1 5985 6155 0 330 303 174 0 chr17 11299103 11299235 -74139245 - MLT1L LTR MaLR -150 465 311 478 228 0 0 chr17 11299985 11300077 -74138403 + MLT2F LTR ERVL 17 108 -555 2905 140 18 8 chr17 11300160 11300667 -74137813 - L1MA7 LINE L1 -7 6284 5773 196 283 19 0 chr17 11300686 11300739 -74137741 - L2 LINE L2 0 3272 3219 2508 69 3 3 chr17 11300810 11301114 -74137366 - AluSg SINE Alu -6 304 1 1321 240 96 22 chr17 11301160 11301713 -74136767 - MLT2F LTR ERVL 0 663 1 234 247 0 104 chr17 11301837 11301914 -74136566 - MIR SINE MIR -3 259 191 * 636 276 168 14 chr17 11301904 11302300 -74136180 + L2 LINE L2 2616 2950 -363 225 94 0 0 chr17 11302300 11302332 -74136148 + (CA)n Simple_repeat Simple_repeat 2 33 0 636 276 168 14 chr17 11302332 11302543 -74135937 + L2 LINE L2 2950 3311 -2 326 303 27 24 chr17 11302553 11302710 -74135770 - MIR SINE MIR -58 150 33 1805 77 20 156 chr17 11302803 11303155 -74135325 + AluYb8 SINE Alu 5 308 -10 231 278 62 0 chr17 11303591 11303688 -74134792 + L1ME LINE L1 5809 5911 -210 319 196 54 62 chr17 11303877 11303989 -74134491 - L1MC5 LINE L1 -78 7883 7773 858 228 147 45 chr17 11303993 11304305 -74134175 - L1ME2 LINE L1 -15 6149 5806 * 1090 275 104 21 chr17 11304290 11304858 -74133622 - L1M4 LINE L1 -2535 3611 2997 647 349 121 32 chr17 11304861 11305039 -74133441 - L2 LINE L2 -1675 1639 1478 2589 68 0 0 chr17 11305039 11305346 -74133134 + AluY SINE Alu 1 307 -4 647 349 121 32 chr17 11305346 11306442 -74132038 - L2 LINE L2 -1836 1478 252 1723 212 88 51 chr17 11306594 11307006 -74131474 - MLT1D LTR MaLR -1 504 70 2093 107 3 13 chr17 11307006 11307305 -74131175 + AluSg SINE Alu 1 296 -14 1723 212 88 51 chr17 11307305 11307378 -74131102 - MLT1D LTR MaLR -435 70 1 577 251 56 17 chr17 11307572 11307751 -74130729 - MER5A DNA MER1_type 0 189 4 525 228 170 6 chr17 11307841 11308012 -74130468 + MIR SINE MIR 14 212 -50 2271 97 0 3 chr17 11308047 11308336 -74130144 - AluSx SINE Alu -24 288 1 395 141 0 0 chr17 11308400 11308464 -74130016 - LTR33A LTR ERVL -46 477 414 2335 91 3 3 chr17 11309788 11310086 -74128394 - AluSq SINE Alu -15 298 1 212 275 28 92 chr17 11310450 11310499 -74127981 - MER5A DNA MER1_type -68 121 80 2079 119 0 3 chr17 11310499 11310804 -74127676 - AluY SINE Alu 0 304 1 212 275 28 92 chr17 11310804 11310862 -74127618 - MER5A DNA MER1_type -109 80 20 1064 62 0 0 chr17 11311031 11311159 -74127321 + AluSg/x SINE Alu 178 305 -7 597 212 8 0 chr17 11311218 11311336 -74127144 + FLAM_A SINE Alu 2 120 -13 541 244 83 65 chr17 11311569 11311786 -74126694 + MIR SINE MIR 20 240 -22 22 0 0 0 chr17 11312882 11312904 -74125576 + AT_rich Low_complexity Low_complexity 1 22 0 2485 53 0 0 chr17 11312912 11313221 -74125259 + AluY SINE Alu 1 309 0 1647 219 64 26 chr17 11313467 11313919 -74124561 - LTR55 LTR ERV 0 548 80 216 0 0 0 chr17 11313958 11313982 -74124498 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 2343 66 0 7 chr17 11313985 11314273 -74124207 - AluY SINE Alu -23 288 3 213 311 113 9 chr17 11314307 11314413 -74124067 + MIR SINE MIR 72 188 -74 1094 157 65 55 chr17 11315050 11315267 -74123213 - MER20 DNA MER1_type 0 219 1 2488 154 51 10 chr17 11315330 11315740 -74122740 + MSTA LTR MaLR 2 428 0 296 249 11 133 chr17 11317370 11317551 -74120929 + MLT1J LTR MaLR 6 164 -347 388 311 84 59 chr17 11317728 11317915 -74120565 + LTR16C LTR ERVL 94 292 -199 1752 141 198 41 chr17 11317915 11318284 -74120196 - MSTA LTR MaLR 0 428 2 388 311 84 59 chr17 11318284 11318382 -74120098 + LTR16C LTR ERVL 292 386 -105 190 229 0 21 chr17 11319186 11319234 -74119246 + MIR SINE MIR 210 256 -6 2130 261 7 22 chr17 11319379 11319922 -74118558 + MLT1F LTR MaLR 8 542 0 335 263 13 77 chr17 11319954 11320110 -74118370 + MIR SINE MIR 117 262 0 932 213 0 0 chr17 11321030 11321194 -74117286 + FRAM SINE Alu 1 159 -17 230 270 11 34 chr17 11321681 11321770 -74116710 + MIR SINE MIR 32 118 -90 180 278 165 0 chr17 11321867 11321982 -74116498 - MIR SINE MIR -18 244 111 1252 51 6 0 chr17 11322049 11322207 -74116273 - L1P LINE L1 -1050 5096 4938 2608 42 0 0 chr17 11322207 11322511 -74115969 + L1PA4 LINE L1 5845 6152 -3 206 283 257 0 chr17 11322628 11322741 -74115739 + L2 LINE L2 3116 3257 -15 270 136 0 0 chr17 11322997 11323041 -74115439 + (TA)n Simple_repeat Simple_repeat 1 44 0 228 270 0 40 chr17 11323050 11323150 -74115330 - L1MC4 LINE L1 -1339 6703 6608 479 239 83 22 chr17 11323178 11323358 -74115122 - L1MC4 LINE L1 -1896 5912 5722 956 214 0 5 chr17 11323615 11323802 -74114678 + MLT2C1 LTR ERVL 1 186 -211 547 285 77 72 chr17 11323803 11323841 -74114639 - HAL1 LINE L1 -766 1741 1705 1646 207 24 0 chr17 11323841 11324175 -74114305 - MER2 DNA MER2_type -1 343 2 547 285 77 72 chr17 11324175 11324993 -74113487 - HAL1 LINE L1 -802 1705 881 397 293 193 36 chr17 11325343 11325732 -74112748 - L1MC4 LINE L1 -1822 4324 3875 1981 179 53 16 chr17 11325738 11326112 -74112368 - MLT1C LTR MaLR 0 467 80 227 275 84 15 chr17 11326252 11326383 -74112097 - L1MC4 LINE L1 -2345 3801 3662 1179 103 0 6 chr17 11326391 11326566 -74111914 - AluSg/x SINE Alu -17 295 122 1235 120 0 6 chr17 11326566 11326741 -74111739 - AluSx SINE Alu -138 174 1 564 114 0 0 chr17 11326741 11326820 -74111660 + MER72 LTR ERV1 644 722 0 1120 166 106 119 chr17 11327027 11327233 -74111247 + MLT1A2 LTR MaLR 1 201 -173 1982 96 51 17 chr17 11327233 11327526 -74110954 + AluSc SINE Alu 1 303 -6 1120 166 106 119 chr17 11327526 11327698 -74110782 + MLT1A2 LTR MaLR 201 374 0 257 287 163 16 chr17 11328276 11328405 -74110075 + MIR3 SINE MIR 47 194 -14 257 286 19 57 chr17 11328905 11329010 -74109470 - MIR SINE MIR -50 212 112 1597 156 71 7 chr17 11329341 11329624 -74108856 + AluJb SINE Alu 1 301 -11 22 0 0 0 chr17 11331294 11331316 -74107164 + AT_rich Low_complexity Low_complexity 1 22 0 548 256 6 52 chr17 11331968 11332140 -74106340 + MER117 DNA MER1_type 8 171 -26 1669 177 30 74 chr17 11333443 11333849 -74104631 + MLT1B LTR MaLR 3 390 0 855 225 109 101 chr17 11333984 11334450 -74104030 - MLT1H LTR MaLR 0 549 80 374 296 57 23 chr17 11335388 11335564 -74102916 - MLT1K LTR MaLR 0 588 407 214 298 298 46 chr17 11335946 11336164 -74102316 + L3 LINE CR1 712 984 -593 275 352 47 16 chr17 11336164 11336292 -74102188 + L3 LINE CR1 1377 1508 -69 201 74 0 0 chr17 11336304 11336331 -74102149 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 729 275 129 39 chr17 11336376 11336685 -74101795 - LTR16A LTR ERVL -24 426 90 748 311 127 38 chr17 11336705 11337130 -74101350 - L2 LINE L2 -44 3269 2807 211 309 41 41 chr17 11337230 11337327 -74101153 - MIR SINE MIR -63 145 49 415 317 98 6 chr17 11337342 11337520 -74100960 - MLT1L LTR MaLR 0 615 421 314 200 71 0 chr17 11337520 11337590 -74100890 - MLT1I LTR MaLR 0 409 335 193 105 0 70 chr17 11337593 11337650 -74100830 + (TAGA)n Simple_repeat Simple_repeat 4 56 0 223 193 35 0 chr17 11337652 11337709 -74100771 + (TCTA)n Simple_repeat Simple_repeat 4 62 0 776 289 37 55 chr17 11337711 11338036 -74100444 - MLT1I LTR MaLR -85 324 6 2089 126 0 0 chr17 11338045 11338346 -74100134 + AluSx SINE Alu 1 301 -11 1110 66 11 22 chr17 11338438 11338620 -74099860 + (GAA)n Simple_repeat Simple_repeat 1 180 0 207 345 0 0 chr17 11339054 11339112 -74099368 + L3b LINE CR1 1522 1579 -4 181 354 98 12 chr17 11339407 11339571 -74098909 + L2 LINE L2 2218 2395 -919 313 295 140 83 chr17 11339576 11340231 -74098249 + L2 LINE L2 2565 3268 -4 291 104 0 0 chr17 11341622 11341670 -74096810 + (CCG)n Simple_repeat Simple_repeat 1 48 0 22 80 0 0 chr17 11341764 11341814 -74096666 + GC_rich Low_complexity Low_complexity 1 50 0 225 0 0 0 chr17 11342050 11342075 -74096405 + (CCG)n Simple_repeat Simple_repeat 2 26 0 201 203 29 29 chr17 11342240 11342309 -74096171 + (CCG)n Simple_repeat Simple_repeat 3 71 0 29 98 0 0 chr17 11342321 11342413 -74096067 + GC_rich Low_complexity Low_complexity 1 92 0 23 68 0 0 chr17 11342538 11342582 -74095898 + GC_rich Low_complexity Low_complexity 1 44 0 23 78 0 0 chr17 11342627 11342678 -74095802 + GC_rich Low_complexity Low_complexity 1 51 0 2135 109 0 0 chr17 11347200 11347503 -74090977 + AluY SINE Alu 2 304 -7 2076 119 0 0 chr17 11348762 11349064 -74089416 - AluY SINE Alu -9 302 1 319 326 16 8 chr17 11349320 11349449 -74089031 - MIR3 SINE MIR -46 162 33 2538 40 3 0 chr17 11349848 11350150 -74088330 + AluY SINE Alu 1 303 -8 366 143 0 0 chr17 11350274 11350337 -74088143 + (TG)n Simple_repeat Simple_repeat 1 63 0 738 290 131 24 chr17 11350583 11350966 -74087514 - MARNA DNA Mariner -85 501 78 539 198 108 25 chr17 11351914 11352071 -74086409 - MIR SINE MIR -18 244 75 242 271 0 0 chr17 11355210 11355269 -74083211 + MIR SINE MIR 57 115 -147 354 330 153 40 chr17 11355487 11355866 -74082614 - L3 LINE CR1 -4 1573 1152 468 252 67 8 chr17 11356049 11356168 -74082312 + L2 LINE L2 3182 3307 -6 226 225 25 12 chr17 11356302 11356382 -74082098 + GA-rich Low_complexity Low_complexity 3 83 0 213 204 0 20 chr17 11356863 11356912 -74081568 - L2 LINE L2 0 3313 3266 * 601 268 50 88 chr17 11356879 11357140 -74081340 - MIR SINE MIR -10 252 2 2074 118 0 3 chr17 11357203 11357508 -74080972 + AluSx SINE Alu 1 304 -8 1837 173 0 0 chr17 11358369 11358681 -74079799 + AluJb SINE Alu 1 312 0 183 184 0 0 chr17 11358683 11358721 -74079759 + GA-rich Low_complexity Low_complexity 3 40 0 26 0 0 0 chr17 11358982 11359008 -74079472 + AT_rich Low_complexity Low_complexity 1 26 0 349 197 7 26 chr17 11359920 11360072 -74078408 + (TGGA)n Simple_repeat Simple_repeat 1 149 0 192 182 0 0 chr17 11360128 11360172 -74078308 + GA-rich Low_complexity Low_complexity 1 44 0 678 319 40 12 chr17 11360191 11360439 -74078041 + MIR SINE MIR 6 260 -2 264 330 0 28 chr17 11361462 11361644 -74076836 + CT-rich Low_complexity Low_complexity 4 180 0 372 296 13 13 chr17 11361719 11361878 -74076602 + CT-rich Low_complexity Low_complexity 1 159 0 2635 171 45 25 chr17 11362485 11363034 -74075446 - L1MB7 LINE L1 -196 5988 5429 733 179 7 26 chr17 11363031 11363182 -74075298 - L1MB7 LINE L1 -1113 5033 4886 * 221 299 15 0 chr17 11365091 11365158 -74073322 - MIR SINE MIR -110 152 85 734 260 80 10 chr17 11365200 11365400 -74073080 - MIR SINE MIR -4 258 45 472 230 69 46 chr17 11366076 11366250 -74072230 + MER5B DNA MER1_type 1 178 0 816 163 16 79 chr17 11366301 11366491 -74071989 - MER5B DNA MER1_type 0 178 1 421 273 20 0 chr17 11367302 11367401 -74071079 + MER5A DNA MER1_type 9 109 -80 447 319 65 11 chr17 11367472 11367657 -74070823 + MIR SINE MIR 47 241 -21 269 237 0 66 chr17 11367952 11368028 -74070452 - MIR SINE MIR 0 262 192 624 199 127 0 chr17 11368247 11368404 -74070076 + MER5A DNA MER1_type 4 183 -6 503 287 33 0 chr17 11368418 11368540 -74069940 - MER5B DNA MER1_type 0 178 53 698 325 137 35 chr17 11369343 11369804 -74068676 + L2 LINE L2 2804 3311 -2 2062 123 3 3 chr17 11370021 11370330 -74068150 - AluSc SINE Alu 0 309 1 245 276 0 0 chr17 11370869 11370927 -74067553 + MER3 DNA MER1_type 40 97 -112 2101 119 0 10 chr17 11370951 11371262 -74067218 - AluSg SINE Alu 0 310 3 1048 195 0 79 chr17 11371505 11371746 -74066734 - MER58A DNA MER1_type -1 223 2 200 231 0 62 chr17 11372025 11372090 -74066390 - L2 LINE L2 -1501 1813 1753 477 266 26 45 chr17 11372242 11372396 -74066084 + L3 LINE CR1 615 765 -812 2015 103 0 67 chr17 11372421 11372750 -74065730 - AluSq SINE Alu -6 307 1 422 226 83 22 chr17 11373414 11373587 -74064893 + MIR SINE MIR 1 187 -63 554 299 41 15 chr17 11374047 11374244 -74064236 - MIR SINE MIR -40 222 21 472 270 152 53 chr17 11376467 11376961 -74061519 - L2 LINE L2 -56 3257 2670 2182 130 0 7 chr17 11376961 11377268 -74061212 - AluSx SINE Alu -7 305 1 472 270 152 53 chr17 11377268 11377398 -74061082 - L2 LINE L2 -643 2670 2554 303 233 117 42 chr17 11377428 11377548 -74060932 - L1MC4 LINE L1 0 8042 7914 644 212 0 17 chr17 11377591 11377770 -74060710 + (CACCAT)n Simple_repeat Simple_repeat 1 176 0 474 301 0 6 chr17 11377770 11377926 -74060554 - L1MC4 LINE L1 -146 7896 7742 370 190 0 13 chr17 11377953 11378032 -74060448 - L2 LINE L2 -803 2511 2434 393 22 0 0 chr17 11378226 11378272 -74060208 + (TC)n Simple_repeat Simple_repeat 1 46 0 351 0 0 0 chr17 11378271 11378310 -74060170 + (CA)n Simple_repeat Simple_repeat 1 39 0 * 409 248 31 62 chr17 11378409 11378538 -74059942 + L2 LINE L2 3148 3272 0 1236 259 161 20 chr17 11378576 11379024 -74059456 - MLT1J LTR MaLR 0 511 1 180 357 63 28 chr17 11380237 11380380 -74058100 + MIR SINE MIR 84 231 -31 245 333 21 0 chr17 11380555 11380648 -74057832 - MIR SINE MIR -89 173 79 228 67 0 0 chr17 11380792 11380822 -74057658 + (GA)n Simple_repeat Simple_repeat 2 31 0 2707 247 81 19 chr17 11381947 11382822 -74055658 - L1M4 LINE L1 -1779 4367 3439 2455 56 7 0 chr17 11383392 11383696 -74054784 - L1PA6 LINE L1 -1 6153 5848 207 433 8 8 chr17 11384320 11384440 -74054040 - MIR3 SINE MIR -86 122 3 205 310 0 0 chr17 11385051 11385109 -74053371 + (CA)n Simple_repeat Simple_repeat 1 58 0 788 236 20 86 chr17 11385153 11385445 -74053035 - MLT1J LTR MaLR -2 509 237 271 231 0 62 chr17 11385502 11385567 -74052913 - MLT1L LTR MaLR -554 61 1 1772 112 0 12 chr17 11386828 11387078 -74051402 - AluSx SINE Alu -13 299 53 606 187 0 0 chr17 11388096 11388203 -74050277 + FRAM SINE Alu 1 99 -77 623 93 0 10 chr17 11388204 11388301 -74050179 + (GGAA)n Simple_repeat Simple_repeat 3 98 0 1497 184 52 4 chr17 11388394 11388661 -74049819 + AluJb SINE Alu 1 280 -32 282 198 0 57 chr17 11388665 11388771 -74049709 + GA-rich Low_complexity Low_complexity 4 103 0 907 178 32 95 chr17 11388877 11389215 -74049265 - L1MC5 LINE L1 -31 7930 7614 271 246 56 56 chr17 11389219 11389345 -74049135 - L1MC/D LINE L1 -1991 5817 5692 400 120 13 40 chr17 11389491 11389566 -74048914 + FAM SINE Alu 104 176 -3 288 321 50 27 chr17 11389661 11389965 -74048515 - L1MC/D LINE L1 -1825 4321 4013 367 270 76 53 chr17 11390093 11390449 -74048031 - L1MC/D LINE L1 -2173 3973 3610 258 116 0 0 chr17 11390550 11390593 -74047887 + (TA)n Simple_repeat Simple_repeat 1 43 0 24 53 0 0 chr17 11390895 11390933 -74047547 + AT_rich Low_complexity Low_complexity 1 38 0 2458 85 0 0 chr17 11391335 11391640 -74046840 - AluY SINE Alu -6 305 1 300 168 30 20 chr17 11391957 11392058 -74046422 + (TTAA)n Simple_repeat Simple_repeat 4 105 0 1480 158 19 68 chr17 11392286 11392354 -74046126 - MLT1B LTR MaLR 0 390 320 2183 88 0 4 chr17 11392354 11392652 -74045828 + AluSc SINE Alu 11 307 0 1480 158 19 68 chr17 11392652 11392893 -74045587 - MLT1B LTR MaLR -70 320 95 1190 141 157 0 chr17 11392902 11393144 -74045336 - L1MA8 LINE L1 -19 6272 5993 669 128 0 9 chr17 11393146 11393255 -74045225 - MLT1B LTR MaLR -257 133 26 584 140 0 0 chr17 11393255 11393348 -74045132 - L1PA8 LINE L1 -146 6026 5934 722 107 0 0 chr17 11393348 11393449 -74045031 + L1PA8 LINE L1 6059 6161 -11 23 0 0 0 chr17 11393449 11393472 -74045008 + AT_rich Low_complexity Low_complexity 1 23 0 267 315 110 46 chr17 11393507 11393815 -74044665 - L2 LINE L2 -268 3045 2714 2327 103 0 0 chr17 11393815 11394115 -74044365 - AluSp SINE Alu -13 300 1 267 315 110 46 chr17 11394115 11394159 -74044321 - L2 LINE L2 -599 2714 2674 218 250 48 65 chr17 11394732 11394856 -74043624 + MIR SINE MIR 141 262 0 2404 96 0 0 chr17 11394872 11395174 -74043306 - AluSc SINE Alu -7 302 1 476 140 11 65 chr17 11395637 11395730 -74042750 - Tigger7 DNA MER2_type 0 2487 2400 2745 181 50 6 chr17 11395733 11396231 -74042249 - Tigger7 DNA MER2_type -1965 522 3 1420 284 99 58 chr17 11396289 11396672 -74041808 - L2 LINE L2 0 3313 2947 2484 76 0 3 chr17 11396672 11396975 -74041505 + AluY SINE Alu 1 302 -9 1420 284 99 58 chr17 11396975 11398224 -74040256 - L2 LINE L2 -366 2947 1611 838 309 73 33 chr17 11398257 11398710 -74039770 - MLT1J LTR MaLR 0 511 41 250 325 48 48 chr17 11398780 11399008 -74039472 - L2 LINE L2 -1741 1573 1346 448 303 166 0 chr17 11399031 11399242 -74039238 - MIR SINE MIR -15 247 2 444 322 82 14 chr17 11399308 11399600 -74038880 - L2 LINE L2 -2050 1264 953 386 111 0 0 chr17 11399970 11400024 -74038456 - MADE1 DNA Mariner 0 80 27 487 260 17 46 chr17 11400230 11400403 -74038077 - MIR SINE MIR 0 262 95 2076 153 44 114 chr17 11400403 11400854 -74037626 - MLT1D LTR MaLR 0 505 97 2383 107 0 0 chr17 11400854 11401162 -74037318 + AluY SINE Alu 1 308 -3 2076 153 44 114 chr17 11401162 11401253 -74037227 - MLT1D LTR MaLR -408 97 1 418 303 49 27 chr17 11401322 11401507 -74036973 - MER117 DNA MER1_type -3 194 6 228 67 0 0 chr17 11401645 11401675 -74036805 + (T)n Simple_repeat Simple_repeat 1 30 0 2827 70 3 3 chr17 11402832 11403187 -74035293 - THE1A LTR MaLR 0 355 1 271 278 191 19 chr17 11403293 11403455 -74035025 - MIR3 SINE MIR -5 203 14 180 0 0 0 chr17 11404042 11404062 -74034418 + (CAGTG)n Simple_repeat Simple_repeat 1 20 0 301 263 6 0 chr17 11404175 11404358 -74034122 + (TG)n Simple_repeat Simple_repeat 1 184 0 460 288 0 0 chr17 11404372 11404542 -74033938 + (TG)n Simple_repeat Simple_repeat 1 170 0 216 340 33 33 chr17 11406093 11406246 -74032234 + MIR SINE MIR 71 223 -39 270 153 0 0 chr17 11408103 11408162 -74030318 + T-rich Low_complexity Low_complexity 1 59 0 554 270 108 45 chr17 11408336 11408669 -74029811 - MLT1J LTR MaLR -147 364 11 278 275 83 0 chr17 11408691 11408800 -74029680 - L2 LINE L2 -88 3225 3108 217 257 114 0 chr17 11408830 11408900 -74029580 - MIR3 SINE MIR -12 196 119 272 289 44 0 chr17 11409090 11409180 -74029300 - MIR3 SINE MIR -10 198 105 197 311 30 53 chr17 11409521 11409653 -74028827 - L3 LINE CR1 -1113 464 336 1805 147 18 18 chr17 11409965 11410251 -74028229 - AluJo SINE Alu -22 290 5 350 266 101 24 chr17 11410955 11411136 -74027344 - MLT1J LTR MaLR -235 199 20 278 350 23 23 chr17 11411184 11411398 -74027082 - L2 LINE L2 -12 3301 3088 685 278 65 4 chr17 11411435 11411683 -74026797 - L2 LINE L2 -365 2949 2687 2279 96 7 13 chr17 11411683 11411817 -74026663 + AluSg SINE Alu 1 134 -176 2493 78 3 0 chr17 11411817 11412123 -74026357 + AluY SINE Alu 1 307 -4 2279 96 7 13 chr17 11412123 11412291 -74026189 + AluSg SINE Alu 134 301 -9 2142 118 0 0 chr17 11412751 11413064 -74025416 - AluSg SINE Alu 0 313 1 27 62 0 0 chr17 11413257 11413305 -74025175 + AT_rich Low_complexity Low_complexity 1 48 0 487 163 1 0 chr17 11413941 11414035 -74024445 + MER63 DNA MER1_type 656 751 -85 253 313 68 12 chr17 11414127 11414290 -74024190 - L1ME LINE L1 -540 5564 5393 266 269 0 0 chr17 11414608 11414675 -74023805 - L2 LINE L2 -262 3051 2985 21 0 0 0 chr17 11415444 11415465 -74023015 + AT_rich Low_complexity Low_complexity 1 21 0 2322 104 0 13 chr17 11415513 11415830 -74022650 - AluSq SINE Alu 0 313 1 751 311 107 24 chr17 11415846 11416801 -74021679 - L1ME LINE L1 -1389 4740 3707 360 329 120 48 chr17 11417092 11417380 -74021100 - L1ME LINE L1 -2744 3385 3119 246 32 0 0 chr17 11417380 11417411 -74021069 + (TC)n Simple_repeat Simple_repeat 2 32 0 2288 104 0 3 chr17 11417411 11417710 -74020770 - AluSg SINE Alu -12 298 1 360 329 120 48 chr17 11417710 11418104 -74020376 - L1ME LINE L1 -3009 3120 2653 267 306 0 16 chr17 11418600 11418724 -74019756 + CT-rich Low_complexity Low_complexity 3 124 0 27 87 0 0 chr17 11418796 11418865 -74019615 + AT_rich Low_complexity Low_complexity 1 69 0 429 177 44 99 chr17 11418995 11419176 -74019304 - L1MC5 LINE L1 -179 7782 7612 365 343 14 42 chr17 11419631 11419774 -74018706 + L2 LINE L2 3134 3272 0 257 301 10 10 chr17 11419852 11419955 -74018525 - L1ME LINE L1 -4972 1147 1045 2374 82 0 0 chr17 11420065 11420356 -74018124 - AluSx SINE Alu -8 304 14 2219 113 7 0 chr17 11421368 11421660 -74016820 + AluSq SINE Alu 1 294 -19 189 0 0 0 chr17 11421660 11421681 -74016799 + (GA)n Simple_repeat Simple_repeat 2 22 0 270 254 30 15 chr17 11422263 11422330 -74016150 - MLT1J LTR MaLR -333 178 111 1309 265 48 69 chr17 11422455 11422753 -74015727 - L1MEc LINE L1 -3998 2398 2095 1639 91 36 0 chr17 11422753 11422974 -74015506 - MER30 DNA MER1_type 0 230 2 1309 265 48 69 chr17 11422974 11423468 -74015012 - L1MEc LINE L1 -4301 2095 1623 258 179 54 0 chr17 11423500 11423556 -74014924 - L1MC3 LINE L1 0 7785 7727 233 225 84 14 chr17 11424251 11424322 -74014158 - MIR3 SINE MIR -46 162 87 2389 64 7 0 chr17 11424363 11424691 -74013789 + AluSp SINE Alu 1 292 -21 242 204 0 0 chr17 11424856 11424910 -74013570 - L1MB8 LINE L1 0 6178 6125 268 297 25 25 chr17 11425358 11425476 -74013004 - L2 LINE L2 0 3272 3155 183 349 20 59 chr17 11425799 11425951 -74012529 - MIR3 SINE MIR -60 148 3 380 266 44 0 chr17 11426735 11426848 -74011632 + MIR3 SINE MIR 87 204 -4 2337 71 10 7 chr17 11426979 11427274 -74011206 + AluY SINE Alu 1 296 -15 315 333 0 10 chr17 11428299 11428401 -74010079 + MIR3 SINE MIR 67 167 -41 1847 119 0 0 chr17 11428534 11428826 -74009654 + AluSx SINE Alu 30 321 0 405 54 0 0 chr17 11428896 11428952 -74009528 + (TC)n Simple_repeat Simple_repeat 1 56 0 27 29 0 0 chr17 11428975 11429009 -74009471 + AT_rich Low_complexity Low_complexity 1 34 0 209 243 149 14 chr17 11429048 11429122 -74009358 + MIR SINE MIR 65 148 -114 196 365 72 12 chr17 11429159 11429326 -74009154 + MIR SINE MIR 3 179 -83 847 271 21 21 chr17 11429337 11429573 -74008907 + MIR SINE MIR 14 249 -13 294 262 103 68 chr17 11429651 11429914 -74008566 - L2 LINE L2 -78 3235 2964 233 146 21 0 chr17 11430881 11430929 -74007551 + CT-rich Low_complexity Low_complexity 2 50 0 721 258 88 46 chr17 11431022 11431282 -74007198 - MLT1K LTR MaLR -220 368 98 240 35 0 0 chr17 11431477 11431506 -74006974 + (GA)n Simple_repeat Simple_repeat 2 30 0 240 276 11 23 chr17 11432967 11433054 -74005426 + CT-rich Low_complexity Low_complexity 4 89 0 535 214 28 20 chr17 11434247 11434461 -74004019 + MER21B LTR ERV1 12 265 -598 186 43 0 0 chr17 11434478 11434501 -74003979 + (TTC)n Simple_repeat Simple_repeat 2 24 0 1907 95 0 0 chr17 11434503 11434744 -74003736 - AluSx SINE Alu -10 302 62 515 133 0 0 chr17 11434744 11434819 -74003661 + AluS SINE Alu 2 76 -237 1430 251 39 78 chr17 11434822 11435359 -74003121 + MER21B LTR ERV1 297 812 -51 375 315 22 7 chr17 11436699 11436848 -74001632 + MIR SINE MIR 21 168 -49 1894 116 27 48 chr17 11436905 11437225 -74001255 + AluSx SINE Alu 1 314 0 581 261 202 44 chr17 11438108 11438449 -74000031 - LTR16C LTR ERVL 0 491 97 2171 77 0 57 chr17 11439380 11439706 -73998774 - AluSc SINE Alu 0 309 1 229 228 89 50 chr17 11439828 11439929 -73998551 + L1ME4a LINE L1 5676 5780 -341 755 62 0 0 chr17 11440072 11440168 -73998312 + L1PA5 LINE L1 6059 6154 0 231 293 49 32 chr17 11440369 11440492 -73997988 + L1ME4a LINE L1 5997 6121 0 766 236 151 46 chr17 11441194 11441654 -73996826 - MLT1H LTR MaLR -7 548 7 269 271 101 96 chr17 11442254 11442319 -73996161 - MIR SINE MIR -62 200 137 2166 128 3 0 chr17 11442319 11442624 -73995856 - AluSx SINE Alu -6 306 1 269 271 101 96 chr17 11442624 11442746 -73995734 - MIR SINE MIR -125 137 12 259 224 26 13 chr17 11443889 11443965 -73994515 - MIR3 SINE MIR -5 203 127 501 269 70 21 chr17 11444337 11444523 -73993957 - LTR16C LTR ERVL 0 491 297 846 139 0 0 chr17 11444864 11444979 -73993501 - AluSq/x SINE Alu -198 115 1 4185 243 74 40 chr17 11444979 11445635 -73992845 - L1M4 LINE L1 -693 5491 4859 4134 143 7 21 chr17 11445635 11446341 -73992139 - L1MA5 LINE L1 -6 6294 5599 4185 243 74 40 chr17 11446341 11447392 -73991088 - L1M4 LINE L1 -1325 4859 3712 468 299 70 0 chr17 11448449 11448636 -73989844 - MIR SINE MIR -14 248 49 201 209 30 0 chr17 11449459 11449526 -73988954 + (TTAA)n Simple_repeat Simple_repeat 2 70 0 227 217 22 0 chr17 11449644 11449690 -73988790 + CT-rich Low_complexity Low_complexity 1 47 0 556 122 0 0 chr17 11451066 11451148 -73987332 - AluSg/x SINE Alu -96 214 133 2381 53 0 3 chr17 11451148 11451470 -73987010 - AluY SINE Alu 0 321 1 4077 65 2 0 chr17 11451802 11452312 -73986168 + L1PA8 LINE L1 5662 6172 0 309 365 28 62 chr17 11452460 11452750 -73985730 + L2 LINE L2 2992 3271 -1 2310 85 3 0 chr17 11454167 11454461 -73984019 + AluSg SINE Alu 1 295 -15 878 200 42 33 chr17 11454955 11455170 -73983310 - MER20 DNA MER1_type -2 217 1 438 294 150 7 chr17 11455184 11455337 -73983143 - MER5A DNA MER1_type -6 183 9 381 306 21 37 chr17 11456489 11456799 -73981681 - LTR33 LTR ERVL -147 374 13 1951 75 0 57 chr17 11457919 11458222 -73980258 + AluY SINE Alu 39 325 0 256 219 0 16 chr17 11458371 11458435 -73980045 - L1ME4a LINE L1 -5 6116 6054 981 233 68 35 chr17 11458524 11458893 -73979587 - L1ME4a LINE L1 -195 5926 5546 2674 154 10 30 chr17 11459013 11459354 -73979126 - L1MB2 LINE L1 -2 6169 5823 2418 75 0 3 chr17 11459354 11459649 -73978831 - AluY SINE Alu -17 294 1 1643 155 44 30 chr17 11459653 11459950 -73978530 - AluSx SINE Alu -11 301 1 2674 154 10 30 chr17 11459950 11460097 -73978383 - L1MB2 LINE L1 -351 5820 5686 5402 48 1 12 chr17 11460828 11461268 -73977212 + L1PA8 LINE L1 5514 5946 -226 2356 101 0 7 chr17 11461268 11461576 -73976904 + AluSg SINE Alu 1 306 -4 5402 48 1 12 chr17 11461576 11461801 -73976679 + L1PA8 LINE L1 5946 6172 0 384 293 80 56 chr17 11462022 11462309 -73976171 - L1ME4a LINE L1 -1312 4834 4541 31 58 0 0 chr17 11462333 11462385 -73976095 + AT_rich Low_complexity Low_complexity 1 52 0 288 231 0 0 chr17 11462719 11462784 -73975696 - L2 LINE L2 -1 3271 3207 1758 177 0 23 chr17 11463131 11463431 -73975049 - AluJo SINE Alu -19 293 1 217 304 47 58 chr17 11463545 11463736 -73974744 + MIR SINE MIR 20 208 -54 2562 170 18 7 chr17 11464654 11465101 -73973379 + MER66A LTR ERV1 27 478 0 1816 203 27 33 chr17 11465120 11465915 -73972565 - L1ME3 LINE L1 -24 6138 5427 282 359 16 31 chr17 11465915 11466107 -73972373 + MIR SINE MIR 20 208 -54 183 184 0 0 chr17 11466147 11466185 -73972295 + (TTA)n Simple_repeat Simple_repeat 1 38 0 2167 127 0 0 chr17 11466264 11466568 -73971912 - AluSx SINE Alu 0 304 1 21 57 0 0 chr17 11466568 11466603 -73971877 + AT_rich Low_complexity Low_complexity 1 35 0 539 328 64 39 chr17 11466757 11467151 -73971329 - L2 LINE L2 -130 3183 2770 1766 165 29 0 chr17 11467151 11467430 -73971050 - AluJb SINE Alu -25 287 1 539 328 64 39 chr17 11467430 11467747 -73970733 - L2 LINE L2 -543 2770 2462 498 192 116 111 chr17 11467836 11468034 -73970446 + MLT1C LTR MaLR 1 199 -191 348 310 209 17 chr17 11468042 11468577 -73969903 - L2 LINE L2 -1470 1844 1207 216 171 0 0 chr17 11469533 11469568 -73968912 + (TAG)n Simple_repeat Simple_repeat 1 35 0 2396 97 0 0 chr17 11469647 11469945 -73968535 - AluSg SINE Alu -12 298 1 274 301 192 19 chr17 11469960 11470116 -73968364 - MIR SINE MIR -73 189 7 200 305 127 0 chr17 11470198 11470324 -73968156 + MIR SINE MIR 35 168 -85 304 371 29 6 chr17 11470927 11471097 -73967383 + MIR3 SINE MIR 30 203 -5 223 308 70 35 chr17 11471676 11471819 -73966661 + MIR3 SINE MIR 22 169 -39 345 280 34 8 chr17 11472486 11472604 -73965876 - MIR SINE MIR -12 250 130 523 280 171 47 chr17 11472989 11473604 -73964876 - L1MC4a LINE L1 -1854 5954 5264 258 314 49 0 chr17 11474206 11474308 -73964172 - HAL1b LINE L1 -752 596 490 221 139 23 0 chr17 11474335 11474378 -73964102 + (TCTA)n Simple_repeat Simple_repeat 1 44 0 1237 267 54 45 chr17 11474643 11475269 -73963211 - L1ME3A LINE L1 -268 5902 5271 230 187 0 67 chr17 11475713 11475788 -73962692 + (TAG)n Simple_repeat Simple_repeat 2 71 0 201 311 33 0 chr17 11475861 11475922 -73962558 - MIR SINE MIR -94 168 106 317 332 56 32 chr17 11476088 11476338 -73962142 - HAL1 LINE L1 -1098 1409 1154 2180 96 10 29 chr17 11477302 11477614 -73960866 - AluSc SINE Alu -3 306 1 770 217 56 22 chr17 11477756 11477936 -73960544 + MER5A DNA MER1_type 2 187 -2 291 145 0 11 chr17 11478214 11478270 -73960210 - Alu SINE Alu -264 44 1 838 194 35 0 chr17 11478427 11478597 -73959883 + MER5A DNA MER1_type 7 182 -7 443 250 23 15 chr17 11478756 11478888 -73959592 + MER5B DNA MER1_type 1 133 -45 876 195 11 26 chr17 11478889 11479079 -73959401 - L1PA11 LINE L1 -12 6162 5976 268 304 36 36 chr17 11479193 11479331 -73959149 - L1ME4a LINE L1 -24 6097 5960 533 136 22 49 chr17 11480081 11480265 -73958215 + (TA)n Simple_repeat Simple_repeat 1 179 0 1690 215 127 25 chr17 11481614 11482103 -73956377 - MLT1F LTR MaLR -3 539 1 314 248 211 0 chr17 11482307 11482416 -73956064 - L2 LINE L2 -5 3267 3136 193 330 20 10 chr17 11482526 11482626 -73955854 - L2 LINE L2 -408 2905 2805 1777 167 3 24 chr17 11483081 11483369 -73955111 - AluJo SINE Alu -30 282 1 2378 110 0 3 chr17 11483919 11484228 -73954252 - AluSx SINE Alu -4 308 1 304 341 127 0 chr17 11484965 11484997 -73953483 - MIR SINE MIR -13 249 222 282 29 0 0 chr17 11484997 11485032 -73953448 + (CATA)n Simple_repeat Simple_repeat 3 37 0 304 341 127 0 chr17 11485032 11485219 -73953261 - MIR SINE MIR -40 222 2 195 186 0 0 chr17 11485815 11485858 -73952622 + GA-rich Low_complexity Low_complexity 2 44 0 615 248 182 48 chr17 11485932 11486434 -73952046 - L2 LINE L2 0 3313 2752 1056 245 103 142 chr17 11486468 11487123 -73951357 - L2 LINE L2 -914 2400 1721 2008 101 4 8 chr17 11487123 11487390 -73951090 + AluSp SINE Alu 40 305 -8 1056 245 103 142 chr17 11487390 11487530 -73950950 - L2 LINE L2 -1593 1721 1577 204 40 0 0 chr17 11487530 11487555 -73950925 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 1056 245 103 142 chr17 11487555 11487835 -73950645 - L2 LINE L2 -1737 1577 1366 644 179 18 0 chr17 11487838 11487950 -73950530 - MER81 DNA DNA 0 114 1 459 0 0 0 chr17 11489781 11489832 -73948648 + (TA)n Simple_repeat Simple_repeat 1 51 0 320 196 254 14 chr17 11491193 11491331 -73947149 + MIR SINE MIR 15 185 -77 532 216 136 19 chr17 11491423 11491585 -73946895 + MER5A DNA MER1_type 9 189 0 24 0 0 0 chr17 11491585 11491609 -73946871 + AT_rich Low_complexity Low_complexity 1 24 0 208 274 119 0 chr17 11492692 11492776 -73945704 + MIR3 SINE MIR 105 198 -10 1624 163 58 73 chr17 11493302 11493714 -73944766 + MSTB1 LTR MaLR 27 432 0 287 310 66 51 chr17 11494141 11494473 -73944007 + L2 LINE L2 2360 2696 -618 712 352 72 20 chr17 11494756 11495202 -73943278 + L2 LINE L2 2804 3272 0 191 311 200 0 chr17 11495233 11495323 -73943157 + MIR SINE MIR 33 140 -68 526 190 66 0 chr17 11495683 11495804 -73942676 - L1MC4 LINE L1 0 8042 7914 215 192 19 19 chr17 11495839 11495891 -73942589 + (CATATA)n Simple_repeat Simple_repeat 5 56 0 275 189 0 81 chr17 11495900 11495974 -73942506 - L1MC4 LINE L1 -123 7919 7852 924 70 0 0 chr17 11495980 11496095 -73942385 - AluY SINE Alu 0 311 197 593 202 40 33 chr17 11496095 11496280 -73942200 - L1MC4 LINE L1 -95 7713 7584 1152 272 71 63 chr17 11496286 11496498 -73941982 - L1M4 LINE L1 -1717 4429 4220 2591 71 0 0 chr17 11496498 11496808 -73941672 - AluSq SINE Alu -3 310 1 1152 272 71 63 chr17 11496808 11497393 -73941087 - L1M4 LINE L1 -1926 4220 3625 * 1932 44 0 0 chr17 11497387 11497614 -73940866 - L1P3 LINE L1 -408 5746 5520 2309 66 3 10 chr17 11497614 11497912 -73940568 + L1PA8 LINE L1 5870 6169 -3 315 0 0 0 chr17 11498386 11498421 -73940059 + (TG)n Simple_repeat Simple_repeat 2 36 0 651 285 54 67 chr17 11498435 11498841 -73939639 - HAL1b LINE L1 -714 634 260 2277 104 7 0 chr17 11499583 11499881 -73938599 - AluSc SINE Alu -9 300 1 24 53 0 0 chr17 11500016 11500054 -73938426 + AT_rich Low_complexity Low_complexity 1 38 0 2280 111 0 13 chr17 11500396 11500712 -73937768 - AluSx SINE Alu 0 312 1 240 376 73 13 chr17 11501362 11501676 -73936804 + L2 LINE L2 2429 2761 -553 1732 190 0 10 chr17 11502179 11502479 -73936001 - AluJb SINE Alu -5 307 11 463 323 59 11 chr17 11503573 11503759 -73934721 - MLT1I LTR MaLR -196 213 19 252 329 71 0 chr17 11506092 11506177 -73932303 + MER5A DNA MER1_type 78 168 -21 253 241 101 0 chr17 11506243 11506322 -73932158 - MER5A DNA MER1_type -80 109 23 389 263 38 97 chr17 11506354 11506512 -73931968 - MER5B DNA MER1_type -3 175 28 2242 98 30 0 chr17 11506512 11506808 -73931672 + AluSg SINE Alu 1 305 -5 389 263 38 97 chr17 11506808 11506835 -73931645 - MER5B DNA MER1_type -150 28 1 244 232 56 99 chr17 11507576 11507718 -73930762 + L2 LINE L2 3137 3272 0 995 247 20 12 chr17 11508076 11508327 -73930153 - MIR SINE MIR 0 262 10 1284 149 5 0 chr17 11509266 11509454 -73929026 + MER5A DNA MER1_type 1 189 0 2206 104 37 0 chr17 11510425 11510724 -73927756 + AluSg SINE Alu 1 310 0 534 317 82 0 chr17 11511298 11511481 -73926999 - MIR SINE MIR -18 244 47 750 231 11 2 chr17 11511706 11511886 -73926594 + MER5A DNA MER1_type 5 178 0 2480 80 0 0 chr17 11511947 11512258 -73926222 - AluY SINE Alu 0 311 1 2417 93 0 0 chr17 11512387 11512687 -73925793 - AluSx SINE Alu -12 300 1 391 271 78 26 chr17 11513113 11513305 -73925175 + MIR SINE MIR 48 249 -13 1615 77 0 0 chr17 11513530 11513726 -73924754 - AluY SINE Alu -10 301 106 272 179 221 0 chr17 11514479 11514574 -73923906 - MLT1H LTR MaLR -13 536 421 837 238 35 53 chr17 11514643 11514925 -73923555 - MLT1H LTR MaLR -251 298 22 423 176 20 26 chr17 11515022 11515175 -73923305 + CT-rich Low_complexity Low_complexity 3 154 0 2326 80 26 7 chr17 11515796 11516098 -73922382 + AluSg SINE Alu 1 308 -2 403 247 73 7 chr17 11516131 11516281 -73922199 - MIR SINE MIR -1 261 102 205 219 16 16 chr17 11516687 11516751 -73921729 + (TTG)n Simple_repeat Simple_repeat 3 66 0 1387 225 21 56 chr17 11516823 11517201 -73921279 - MLT1A1 LTR MaLR 0 365 1 289 262 10 19 chr17 11517289 11517392 -73921088 + MER103 DNA DNA 54 155 -11 336 291 196 10 chr17 11517795 11517994 -73920486 - MIR SINE MIR -6 256 21 29 47 0 0 chr17 11517994 11518037 -73920443 + AT_rich Low_complexity Low_complexity 1 43 0 199 355 16 33 chr17 11519464 11519585 -73918895 + MIR SINE MIR 48 166 -96 1667 39 0 10 chr17 11520011 11520217 -73918263 + L1PA4 LINE L1 5949 6152 -3 195 167 0 0 chr17 11520220 11520262 -73918218 + A-rich Low_complexity Low_complexity 1 42 0 25 51 0 0 chr17 11520306 11520345 -73918135 + AT_rich Low_complexity Low_complexity 1 39 0 2264 115 0 0 chr17 11520912 11521216 -73917264 + AluSx SINE Alu 1 304 -8 259 350 83 6 chr17 11521682 11521839 -73916641 - LTR67 LTR ERVL -263 294 126 2055 119 0 39 chr17 11523460 11523771 -73914709 + AluSx SINE Alu 1 299 -13 254 206 16 0 chr17 11524197 11524260 -73914220 + (TA)n Simple_repeat Simple_repeat 2 65 0 390 21 0 0 chr17 11524313 11524360 -73914120 + (TAGA)n Simple_repeat Simple_repeat 4 50 0 460 278 57 60 chr17 11524811 11525160 -73913320 + L1MEd LINE L1 862 1209 -4910 228 268 30 81 chr17 11525216 11525451 -73913029 + HAL1 LINE L1 1450 1672 -835 21 0 0 0 chr17 11525689 11525710 -73912770 + AT_rich Low_complexity Low_complexity 1 21 0 2336 75 7 19 chr17 11525712 11526019 -73912461 + AluY SINE Alu 1 303 -8 248 188 125 31 chr17 11526027 11526123 -73912357 + L1MC4 LINE L1 7938 8042 0 304 231 112 15 chr17 11526296 11526430 -73912050 + MIR3 SINE MIR 7 153 -55 793 328 42 56 chr17 11526537 11527111 -73911369 - MLT1K LTR MaLR -10 578 13 2115 109 0 3 chr17 11528117 11528423 -73910057 - AluSg SINE Alu 0 305 1 210 71 0 0 chr17 11528592 11528620 -73909860 + (TTAA)n Simple_repeat Simple_repeat 1 28 0 414 274 122 17 chr17 11529022 11529259 -73909221 - MIR SINE MIR 0 262 1 1086 204 4 40 chr17 11529559 11529766 -73908714 - MLT1F LTR MaLR 0 542 342 2524 70 0 16 chr17 11529766 11530079 -73908401 - AluY SINE Alu -3 308 1 1086 204 4 40 chr17 11530079 11530096 -73908384 - MLT1F LTR MaLR -200 342 326 1862 151 29 0 chr17 11530217 11530495 -73907985 - ERVL LTR ERVL -849 4915 4630 713 169 0 24 chr17 11530497 11530621 -73907859 + MLT1A1 LTR MaLR 211 331 -34 * 1856 210 31 3 chr17 11530599 11530952 -73907528 - MLT2B2 LTR ERVL -152 363 1 549 196 0 6 chr17 11530952 11531095 -73907385 - MER89 LTR ERV1 -318 241 1 1480 227 106 31 chr17 11531801 11532188 -73906292 + MLT2B1 LTR ERVL 1 416 -104 523 271 151 9 chr17 11532721 11532939 -73905541 - MIR SINE MIR -13 249 1 351 0 0 0 chr17 11533319 11533358 -73905122 + (TA)n Simple_repeat Simple_repeat 1 39 0 411 21 0 0 chr17 11533455 11533503 -73904977 + (TA)n Simple_repeat Simple_repeat 2 49 0 2319 200 69 95 chr17 11533620 11534046 -73904434 - L1ME1 LINE L1 -5 6161 5768 930 138 0 0 chr17 11534046 11534220 -73904260 + (TA)n Simple_repeat Simple_repeat 1 174 0 2319 200 69 95 chr17 11534220 11534664 -73903816 - L1ME1 LINE L1 -398 5768 5314 221 234 26 13 chr17 11534668 11534745 -73903735 + T-rich Low_complexity Low_complexity 2 79 0 1836 157 0 20 chr17 11534840 11535140 -73903340 - AluJo SINE Alu -18 294 1 589 132 0 19 chr17 11535143 11535249 -73903231 - L1ME1 LINE L1 -852 5294 5191 649 211 8 0 chr17 11535250 11535378 -73903102 - L1MEc LINE L1 -6159 237 109 320 222 0 0 chr17 11535463 11535526 -73902954 + L1MEc LINE L1 36 98 -6298 198 0 0 0 chr17 11535526 11535548 -73902932 + (TA)n Simple_repeat Simple_repeat 2 23 0 560 249 75 0 chr17 11535740 11535913 -73902567 - MIR SINE MIR -8 254 69 4076 105 2 2 chr17 11536843 11537397 -73901083 - MER41A LTR ERV1 0 554 1 2341 96 7 0 chr17 11538719 11539020 -73899460 - AluSp SINE Alu -8 305 3 1599 144 8 8 chr17 11539649 11539912 -73898568 - Tigger5 DNA MER2_type 0 2323 2061 1121 238 33 0 chr17 11539923 11540133 -73898347 - Tigger5 DNA MER2_type -2105 218 2 200 227 0 0 chr17 11540328 11540372 -73898108 + (TTTA)n Simple_repeat Simple_repeat 2 45 0 2372 86 0 0 chr17 11540535 11540827 -73897653 - AluSx SINE Alu -20 292 1 376 281 8 16 chr17 11541126 11541247 -73897233 + MIR SINE MIR 143 262 0 1598 195 27 27 chr17 11542051 11542420 -73896060 + Charlie1b DNA MER1_type 154 522 -1 728 306 73 38 chr17 11543671 11544066 -73894414 + MLT1I LTR MaLR 1 409 0 2360 69 0 20 chr17 11544364 11544667 -73893813 - AluSc SINE Alu -12 297 1 845 228 11 0 chr17 11544898 11545082 -73893398 - MER5A DNA MER1_type -3 186 1 425 345 0 24 chr17 11545756 11545921 -73892559 - MIR3 SINE MIR -25 183 23 274 175 88 25 chr17 11546063 11546143 -73892337 - MIR3 SINE MIR -13 195 111 204 40 0 0 chr17 11546960 11546985 -73891495 + (TG)n Simple_repeat Simple_repeat 2 26 0 399 91 0 0 chr17 11547661 11547716 -73890764 + MADE1 DNA Mariner 1 55 -25 351 20 0 59 chr17 11547734 11547785 -73890695 + MADE1 DNA Mariner 32 79 -1 498 271 63 24 chr17 11547873 11548080 -73890400 - L1MB8 LINE L1 -9 6169 5955 518 259 99 12 chr17 11549467 11549629 -73888851 - MIR3 SINE MIR -14 194 19 270 81 0 0 chr17 11551263 11551300 -73887180 + (TCCC)n Simple_repeat Simple_repeat 4 40 0 201 214 14 43 chr17 11553834 11553904 -73884576 + (CCCCG)n Simple_repeat Simple_repeat 5 72 0 196 240 281 10 chr17 11554645 11554741 -73883739 + MER5A DNA MER1_type 42 163 -26 * 472 182 30 10 chr17 11554670 11554769 -73883711 - MER5A DNA MER1_type -80 109 9 188 240 20 0 chr17 11560835 11560885 -73877595 + MIR SINE MIR 27 77 -131 2231 111 0 7 chr17 11561856 11562153 -73876327 + AluSg SINE Alu 1 295 -15 268 196 0 0 chr17 11563048 11563094 -73875386 - L1MB8 LINE L1 -2095 5713 5668 238 287 11 23 chr17 11563139 11563226 -73875254 + L1MC/D LINE L1 5665 5750 -2058 213 39 0 0 chr17 11563744 11563770 -73874710 + (TA)n Simple_repeat Simple_repeat 2 27 0 578 316 19 5 chr17 11563976 11564182 -73874298 - MIR SINE MIR -39 223 15 792 316 41 49 chr17 11564389 11565261 -73873219 - L1M4 LINE L1 -2887 3259 2396 2202 103 3 29 chr17 11565261 11565572 -73872908 - AluSx SINE Alu -9 303 1 792 316 41 49 chr17 11565572 11565734 -73872746 - L1M4 LINE L1 -3750 2396 2234 1451 278 108 25 chr17 11566098 11566619 -73871861 + MLT1G1 LTR MaLR 4 567 -28 4893 182 36 33 chr17 11566620 11567228 -73871252 - L1MD1 LINE L1 -34 7019 6414 2398 86 0 3 chr17 11567228 11567532 -73870948 - AluY SINE Alu -8 303 1 4893 182 36 33 chr17 11567532 11568215 -73870265 - L1MD1 LINE L1 -639 6414 5733 1653 228 23 56 chr17 11568222 11568778 -73869702 - L1MB8 LINE L1 -1144 5002 4465 281 245 133 40 chr17 11568783 11568934 -73869546 - L1MD1 LINE L1 -4314 2824 2660 882 226 42 49 chr17 11569689 11569976 -73868504 - L1MD1 LINE L1 -4632 2506 2222 573 266 56 48 chr17 11570054 11570306 -73868174 - L1MD1 LINE L1 -6577 282 29 405 239 99 0 chr17 11571108 11571235 -73867245 - MIR3 SINE MIR -48 160 9 356 226 96 17 chr17 11571419 11571534 -73866946 - MER103 DNA DNA -9 157 34 928 318 98 13 chr17 11571558 11572030 -73866450 - LTR33 LTR ERVL -9 512 1 207 297 0 0 chr17 11572714 11572778 -73865702 + (TG)n Simple_repeat Simple_repeat 1 64 0 2139 117 0 3 chr17 11572969 11573295 -73865185 + AluSx SINE Alu 1 325 0 298 299 86 46 chr17 11573454 11573628 -73864852 - MER5A DNA MER1_type 0 189 9 2113 103 4 11 chr17 11573850 11574161 -73864319 + AluSg SINE Alu 1 309 0 348 272 0 22 chr17 11576189 11576281 -73862199 + L1MC4 LINE L1 6614 6703 -1339 337 299 0 0 chr17 11576206 11576293 -73862187 - L1MC4 LINE L1 -1340 6702 6616 * 414 181 0 0 chr17 11576281 11576293 -73862187 + (TA)n Simple_repeat Simple_repeat 3 106 0 248 0 31 0 chr17 11576293 11576325 -73862155 + (CA)n Simple_repeat Simple_repeat 2 34 0 375 292 200 31 chr17 11576352 11576547 -73861933 - MIR SINE MIR -34 228 1 2082 108 0 19 chr17 11577049 11577363 -73861117 - AluSc SINE Alu -1 308 1 281 357 36 36 chr17 11577457 11577625 -73860855 + L2 LINE L2 2948 3115 -157 191 184 143 41 chr17 11577835 11577884 -73860596 + L2 LINE L2 3256 3309 -4 1914 104 3 92 chr17 11577903 11578241 -73860239 + AluSq SINE Alu 1 308 -5 2340 69 3 0 chr17 11578320 11578623 -73859857 + AluY SINE Alu 1 304 -7 225 0 0 0 chr17 11579446 11579471 -73859009 + (A)n Simple_repeat Simple_repeat 1 25 0 217 267 0 0 chr17 11579692 11579737 -73858743 + (CA)n Simple_repeat Simple_repeat 2 46 0 1408 147 12 4 chr17 11580224 11580476 -73858004 - L1MA7 LINE L1 0 6291 6038 613 239 46 0 chr17 11580561 11580691 -73857789 - MIR SINE MIR -48 214 79 513 32 0 0 chr17 11580936 11580999 -73857481 + (CA)n Simple_repeat Simple_repeat 2 64 0 193 176 106 59 chr17 11581003 11581088 -73857392 - MIR SINE MIR -158 104 16 227 281 96 15 chr17 11581944 11582079 -73856401 - L1ME LINE L1 -347 5774 5629 371 241 112 101 chr17 11582149 11582562 -73855918 - L1ME LINE L1 -776 5370 5107 2226 92 0 19 chr17 11582984 11583300 -73855180 - AluSg SINE Alu 0 310 1 23 0 0 0 chr17 11583988 11584011 -73854469 + AT_rich Low_complexity Low_complexity 1 23 0 869 237 56 19 chr17 11584380 11584595 -73853885 - MER58A DNA MER1_type 0 224 2 495 128 8 96 chr17 11585231 11585274 -73853206 + L1MA4A LINE L1 6185 6230 -73 504 0 0 0 chr17 11585274 11585330 -73853150 + (TA)n Simple_repeat Simple_repeat 2 57 0 495 128 8 96 chr17 11585330 11585411 -73853069 + L1MA4A LINE L1 6230 6298 -5 1537 168 48 20 chr17 11586185 11586477 -73852003 - AluJb SINE Alu -12 300 1 2332 84 0 0 chr17 11586549 11586858 -73851622 - AluSc SINE Alu 0 309 1 354 261 57 76 chr17 11587358 11587412 -73851068 - L1ME4a LINE L1 -7 6114 6060 2260 99 3 6 chr17 11587412 11587726 -73850754 + AluSq SINE Alu 1 313 0 354 261 57 76 chr17 11587726 11587828 -73850652 - L1ME4a LINE L1 -61 6060 5961 2373 86 0 3 chr17 11588096 11588487 -73849993 - AluSp SINE Alu 0 390 1 402 102 0 0 chr17 11589491 11589550 -73848930 + AluJ SINE Alu 47 105 -207 864 172 12 24 chr17 11589755 11589924 -73848556 + AluJ SINE Alu 113 279 -33 22 0 0 54 chr17 11589927 11589946 -73848534 + AT_rich Low_complexity Low_complexity 1 19 -16 2370 81 0 0 chr17 11589946 11590256 -73848224 + AluY SINE Alu 1 310 -1 22 0 0 54 chr17 11590256 11590273 -73848207 + AT_rich Low_complexity Low_complexity 19 35 0 1655 150 6 67 chr17 11590392 11590706 -73847774 - AluJo SINE Alu -14 298 4 712 274 73 51 chr17 11591173 11591527 -73846953 - L2 LINE L2 -3 3310 2949 2003 294 145 49 chr17 11591726 11592535 -73845945 - L2 LINE L2 -677 2637 1907 2364 197 13 6 chr17 11592535 11593008 -73845472 - L1MB3 LINE L1 -2 6181 5706 2003 294 145 49 chr17 11593008 11593400 -73845080 - L2 LINE L2 -1407 1907 1554 599 210 27 75 chr17 11593400 11593586 -73844894 - MER5B DNA MER1_type -1 177 1 2003 294 145 49 chr17 11593586 11593698 -73844782 - L2 LINE L2 -1760 1554 1196 345 82 0 0 chr17 11593717 11593766 -73844714 + (TG)n Simple_repeat Simple_repeat 2 50 0 341 268 191 41 chr17 11593901 11594095 -73844385 - MIR SINE MIR -26 236 14 1620 148 4 11 chr17 11594406 11594684 -73843796 + AluJo SINE Alu 1 276 -36 2636 103 69 2 chr17 11594693 11595099 -73843381 + MER4C LTR ERV1 12 444 -21 180 242 66 66 chr17 11595122 11595213 -73843267 + L2 LINE L2 2193 2283 -1031 280 272 12 0 chr17 11595508 11595589 -73842891 - MER63 DNA MER1_type -2 1060 979 369 269 50 25 chr17 11595593 11595712 -73842768 - MER63 DNA MER1_type -88 748 1 839 260 59 0 chr17 11596525 11596779 -73841701 + LTR16A1 LTR ERVL 189 457 0 547 69 46 0 chr17 11596842 11596929 -73841551 + CT-rich Low_complexity Low_complexity 3 93 0 470 169 0 0 chr17 11596940 11597023 -73841457 - AluS SINE Alu -2 308 226 225 324 0 0 chr17 11597253 11597321 -73841159 - LTR16C LTR ERVL -16 475 408 194 333 17 0 chr17 11597855 11597915 -73840565 + L2 LINE L2 3203 3263 -9 196 250 141 16 chr17 11598574 11598638 -73839842 + L3b LINE CR1 1214 1285 -298 372 244 57 8 chr17 11598795 11598918 -73839562 + L1P4 LINE L1 5339 5467 -707 311 280 27 70 chr17 11598934 11599091 -73839389 - L1MC4 LINE L1 -1339 6983 1933 410 265 193 16 chr17 11599141 11599519 -73838961 + L1ME4a LINE L1 5555 5999 -122 21 57 0 0 chr17 11599609 11599644 -73838836 + AT_rich Low_complexity Low_complexity 1 35 0 329 271 193 29 chr17 11600122 11600262 -73838218 - MIR3 SINE MIR -16 192 30 241 164 66 16 chr17 11600642 11600703 -73837777 - L1M4 LINE L1 -396 5788 5725 2954 58 3 11 chr17 11600745 11601125 -73837355 - L1PA8 LINE L1 -3 6169 5793 644 284 70 23 chr17 11601129 11601344 -73837136 - MIR SINE MIR -36 226 2 230 320 68 19 chr17 11601467 11601570 -73836910 - MIR SINE MIR -150 112 5 216 273 15 30 chr17 11601966 11602032 -73836448 - L2 LINE L2 -219 3053 2989 243 235 274 20 chr17 11602729 11602831 -73835649 + MIR SINE MIR 85 212 -50 565 308 123 8 chr17 11603234 11603487 -73834993 + L2 LINE L2 3031 3312 -1 357 109 0 0 chr17 11603618 11603673 -73834807 + (GGGGA)n Simple_repeat Simple_repeat 5 59 0 1047 161 144 69 chr17 11603730 11604021 -73834459 + MLT1A1 LTR MaLR 53 365 0 228 281 34 45 chr17 11604021 11604110 -73834370 - MIR3 SINE MIR -118 90 3 496 345 82 0 chr17 11604992 11605186 -73833294 - MIR SINE MIR -2 260 51 279 267 20 30 chr17 11605893 11605994 -73832486 + GA-rich Low_complexity Low_complexity 2 101 0 650 209 7 27 chr17 11608979 11609127 -73829353 + MIR3 SINE MIR 45 189 -19 2119 118 3 0 chr17 11609459 11609765 -73828715 - AluSx SINE Alu -5 307 1 2722 10 0 0 chr17 11609778 11610083 -73828397 - AluY SINE Alu -6 305 1 251 71 24 0 chr17 11610480 11610522 -73827958 + (TC)n Simple_repeat Simple_repeat 2 44 0 2180 75 4 0 chr17 11610817 11611095 -73827385 + AluSq SINE Alu 19 297 -16 619 301 101 5 chr17 11611106 11611315 -73827165 + MIR SINE MIR 2 230 -32 913 194 91 0 chr17 11611395 11611581 -73826899 + MER3 DNA MER1_type 7 209 0 394 226 105 16 chr17 11611646 11611770 -73826710 + MIR3 SINE MIR 46 180 -28 238 308 60 60 chr17 11611772 11611889 -73826591 + MER91C DNA MER1_type 1 117 -23 1978 160 0 0 chr17 11612209 11612521 -73825959 + AluSx SINE Alu 1 312 0 364 238 117 67 chr17 11613270 11613505 -73824975 - MIR SINE MIR -3 259 3 216 218 0 36 chr17 11613509 11613546 -73824934 + CT-rich Low_complexity Low_complexity 5 41 -16 1402 166 12 0 chr17 11613546 11613793 -73824687 - L1MA4 LINE L1 -5 6295 6046 216 218 0 36 chr17 11613793 11613810 -73824670 + CT-rich Low_complexity Low_complexity 41 57 0 429 317 7 28 chr17 11614751 11614893 -73823587 + L2 LINE L2 2593 2731 -583 656 258 81 10 chr17 11615224 11615433 -73823047 + MER102a DNA MER1_type 79 302 -28 2376 75 0 3 chr17 11615445 11615753 -73822727 - AluSg SINE Alu -3 307 1 432 82 0 0 chr17 11616177 11616238 -73822242 + (TGGA)n Simple_repeat Simple_repeat 3 63 0 195 189 44 103 chr17 11616906 11617011 -73821469 - MIR SINE MIR -73 135 40 373 292 0 0 chr17 11617109 11617198 -73821282 - MER81 DNA DNA -1 113 25 689 247 80 0 chr17 11617250 11617412 -73821068 - MER5B DNA MER1_type -2 176 2 204 40 0 0 chr17 11618604 11618629 -73819851 + (TG)n Simple_repeat Simple_repeat 1 25 0 2076 133 3 0 chr17 11618684 11618993 -73819487 + AluSx SINE Alu 1 310 -2 226 325 16 71 chr17 11619701 11619827 -73818653 - MIR3 SINE MIR -81 127 9 2185 94 3 3 chr17 11620142 11620440 -73818040 + AluSc SINE Alu 1 298 -11 1329 149 4 56 chr17 11620645 11620914 -73817566 + AluJo SINE Alu 39 293 -19 194 244 44 100 chr17 11621009 11621099 -73817381 - MIR SINE MIR -105 103 19 1008 158 12 122 chr17 11622263 11622509 -73815971 - MER20 DNA MER1_type 0 219 1 268 284 75 75 chr17 11622567 11622768 -73815712 + MIR SINE MIR 46 246 -16 1061 269 90 79 chr17 11623272 11623769 -73814711 + MLT1K LTR MaLR 26 588 0 340 244 8 87 chr17 11623829 11623956 -73814524 + MIR3 SINE MIR 89 205 -3 916 226 61 5 chr17 11625088 11625300 -73813180 - MER58A DNA MER1_type 0 224 1 306 296 64 40 chr17 11625748 11625873 -73812607 - L2 LINE L2 -9 3263 3136 2233 124 7 0 chr17 11627512 11627811 -73810669 + AluSx SINE Alu 1 301 -11 1625 149 8 0 chr17 11628271 11628513 -73809967 - AluJo SINE Alu -46 266 23 309 250 114 81 chr17 11628722 11628895 -73809585 - L1MDa LINE L1 -3890 2650 2484 2398 91 3 0 chr17 11628895 11629191 -73809289 - AluSp SINE Alu -16 297 1 309 250 114 81 chr17 11629191 11629349 -73809131 - L1MDa LINE L1 -4056 2484 2308 317 268 63 90 chr17 11629728 11630027 -73808453 - HAL1b LINE L1 -781 567 277 2291 111 0 0 chr17 11630420 11630717 -73807763 + AluSg SINE Alu 1 297 -13 23 54 0 0 chr17 11630729 11630766 -73807714 + AT_rich Low_complexity Low_complexity 1 37 0 279 0 0 0 chr17 11630823 11630843 -73807637 + (CA)n Simple_repeat Simple_repeat 1 51 0 279 0 0 0 chr17 11630843 11630874 -73807606 + (CA)n Simple_repeat Simple_repeat 2 32 0 1991 154 0 0 chr17 11630928 11631214 -73807266 - AluSx SINE Alu -26 286 1 189 107 0 0 chr17 11631793 11631821 -73806659 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 7847 208 76 68 chr17 11631843 11632438 -73806042 + L1MC1 LINE L1 1295 1884 -4542 203 88 29 0 chr17 11632438 11632472 -73806008 + (TA)n Simple_repeat Simple_repeat 1 35 0 7847 208 76 68 chr17 11632472 11632570 -73805910 + L1MC1 LINE L1 1884 1980 -4446 3054 59 0 0 chr17 11632570 11632945 -73805535 - L1PA8 LINE L1 0 6172 5798 7847 208 76 68 chr17 11632945 11632965 -73805515 + L1MC1 LINE L1 1980 1998 -4428 534 100 0 0 chr17 11632965 11633035 -73805445 - Alu SINE Alu -22 289 220 7847 208 76 68 chr17 11633035 11633236 -73805244 + L1MC1 LINE L1 1998 2196 -4230 7940 19 0 0 chr17 11633236 11634787 -73803693 + L1PA2 LINE L1 4600 6150 -5 7847 208 76 68 chr17 11634787 11637719 -73800761 + L1MC1 LINE L1 2196 5245 -1181 3001 86 3 4 chr17 11637721 11638466 -73800014 + L1PA8 LINE L1 5507 6448 -4 641 198 69 85 chr17 11638587 11638886 -73799594 + MLT1A1 LTR MaLR 37 349 -47 3521 159 40 12 chr17 11638886 11639712 -73798768 + L1MC1 LINE L1 5260 6108 -505 1273 208 0 8 chr17 11639716 11639952 -73798528 + AluJo SINE Alu 5 238 -74 2884 152 31 2 chr17 11639953 11640439 -73798041 + L1MC1 LINE L1 6114 6613 0 284 271 0 12 chr17 11640612 11640697 -73797783 - L2 LINE L2 -245 3068 2985 325 289 26 39 chr17 11640943 11640977 -73797503 + LTR33 LTR ERVL 303 336 -185 2399 98 3 0 chr17 11640977 11641283 -73797197 - AluSx SINE Alu -5 307 1 325 289 26 39 chr17 11641283 11641404 -73797076 + LTR33 LTR ERVL 336 456 -65 1449 179 50 64 chr17 11642011 11642368 -73796112 - MLT1B LTR MaLR -24 366 15 1984 177 174 0 chr17 11642662 11643092 -73795388 - MLT1D LTR MaLR 0 505 1 2351 87 16 10 chr17 11643163 11643472 -73795008 - AluSx SINE Alu -1 311 1 207 288 42 93 chr17 11644110 11644228 -73794252 + MIR3 SINE MIR 94 205 -3 308 282 13 0 chr17 11644938 11645016 -73793464 + L2 LINE L2 3189 3267 -5 515 196 122 0 chr17 11645672 11645779 -73792701 + MLT1D LTR MaLR 2 121 -384 720 163 47 0 chr17 11646666 11646795 -73791685 + AluJb SINE Alu 157 291 -21 2325 85 10 0 chr17 11647256 11647550 -73790930 - AluSq SINE Alu -16 297 1 2081 152 0 0 chr17 11647994 11648297 -73790183 + AluJo SINE Alu 1 303 -9 491 275 31 33 chr17 11648421 11648669 -73789811 + L1MC4a LINE L1 5734 5998 -123 578 280 48 0 chr17 11648888 11649056 -73789424 - MIR SINE MIR 0 262 87 2127 110 3 23 chr17 11649301 11649602 -73788878 + AluSx SINE Alu 18 312 0 2871 187 26 6 chr17 11650250 11650785 -73787695 + MER74A LTR ERVL 1 546 -12 2414 79 0 0 chr17 11650791 11651082 -73787398 - AluY SINE Alu -7 304 14 28 29 0 0 chr17 11651109 11651144 -73787336 + AT_rich Low_complexity Low_complexity 1 35 0 2198 92 4 0 chr17 11651532 11651825 -73786655 + AluSp SINE Alu 13 306 0 451 277 116 18 chr17 11651959 11652183 -73786297 - L3b LINE CR1 -199 1384 1139 333 273 7 148 chr17 11652664 11652961 -73785519 - L2 LINE L2 -9 3263 3009 2395 61 0 45 chr17 11652974 11653287 -73785193 - AluY SINE Alu -12 299 1 360 281 7 22 chr17 11653306 11653441 -73785039 - MIR SINE MIR -67 195 63 2423 90 0 0 chr17 11654108 11654407 -73784073 - AluY SINE Alu -12 299 1 2225 104 0 36 chr17 11654454 11654761 -73783719 - AluSg SINE Alu -14 296 1 185 359 148 0 chr17 11655657 11655785 -73782695 - MIR3 SINE MIR -48 160 14 381 223 97 10 chr17 11656816 11656919 -73781561 - MIR SINE MIR -11 251 140 202 287 83 89 chr17 11656992 11657010 -73781470 - L2 LINE L2 0 3313 3296 2220 104 0 0 chr17 11657010 11657323 -73781157 - AluY SINE Alu 0 313 1 202 287 83 89 chr17 11657323 11657460 -73781020 - L2 LINE L2 -17 3296 3158 628 286 100 46 chr17 11657494 11658094 -73780386 - L2 LINE L2 -254 3059 2423 590 188 17 7 chr17 11658159 11658309 -73780171 + L1MC/D LINE L1 5587 5697 -469 * 1012 206 15 0 chr17 11658307 11658506 -73779974 - L1ME1 LINE L1 -173 5993 5792 23 33 0 0 chr17 11658545 11658575 -73779905 + AT_rich Low_complexity Low_complexity 1 30 0 366 170 20 20 chr17 11659227 11659327 -73779153 + GA-rich Low_complexity Low_complexity 1 100 0 609 149 22 33 chr17 11659408 11659589 -73778891 + GA-rich Low_complexity Low_complexity 2 180 0 493 295 44 18 chr17 11660299 11660526 -73777954 - L3 LINE CR1 -48 1529 1297 287 307 132 39 chr17 11660564 11660844 -73777636 + L2 LINE L2 3008 3313 0 24 0 0 0 chr17 11661197 11661221 -73777259 + AT_rich Low_complexity Low_complexity 1 24 0 667 95 11 0 chr17 11661497 11661592 -73776888 - AluSp/q SINE Alu -11 302 207 1794 115 0 8 chr17 11661592 11661836 -73776644 - AluSq SINE Alu -71 242 1 1558 227 89 18 chr17 11661849 11662025 -73776455 + MLT1C LTR MaLR 1 163 -304 2508 57 0 7 chr17 11662025 11662325 -73776155 + AluY SINE Alu 1 298 -13 1558 227 89 18 chr17 11662325 11662584 -73775896 + MLT1C LTR MaLR 163 467 0 2134 129 3 19 chr17 11662734 11663051 -73775429 - AluSx SINE Alu 0 312 1 2135 104 11 0 chr17 11663385 11663664 -73774816 - AluSq SINE Alu -31 282 1 1705 155 14 17 chr17 11663666 11663962 -73774518 - AluJo SINE Alu -17 295 1 455 156 44 11 chr17 11665869 11665959 -73772521 - L1MD2 LINE L1 -208 6151 6059 410 353 32 64 chr17 11665969 11666093 -73772387 + L2 LINE L2 2932 3058 -214 2311 103 0 0 chr17 11666093 11666395 -73772085 + AluSg SINE Alu 9 310 0 410 353 32 64 chr17 11666395 11666616 -73771864 + L2 LINE L2 3058 3266 -6 844 234 18 31 chr17 11666849 11667075 -73771405 + MLT1A1 LTR MaLR 1 223 -142 191 86 0 29 chr17 11667604 11667639 -73770841 + (TTTTTG)n Simple_repeat Simple_repeat 6 39 0 2193 130 10 0 chr17 11667866 11668174 -73770306 - AluSx SINE Alu -1 311 1 278 200 40 40 chr17 11668352 11668427 -73770053 - L2 LINE L2 -4 3309 3235 192 77 0 0 chr17 11668463 11668489 -73769991 + (CTA)n Simple_repeat Simple_repeat 1 26 0 455 231 88 44 chr17 11668498 11668658 -73769822 - MIR SINE MIR -4 258 92 698 226 83 8 chr17 11669561 11669786 -73768694 - MIR SINE MIR -19 243 7 231 298 39 39 chr17 11672038 11672142 -73766338 + L2 LINE L2 3210 3313 0 224 277 15 15 chr17 11672631 11672696 -73765784 - MIR SINE MIR -164 98 34 617 225 135 52 chr17 11673075 11673342 -73765138 + LTR16A1 LTR ERVL 163 451 -6 1551 172 35 118 chr17 11673471 11673896 -73764584 + MLT1B LTR MaLR 1 390 0 215 265 229 18 chr17 11675496 11675662 -73762818 - L2 LINE L2 -1 3312 3112 950 208 15 15 chr17 11675826 11676023 -73762457 - MLT1A2 LTR MaLR 0 390 194 202 182 0 0 chr17 11676033 11676066 -73762414 + polypurine Low_complexity Low_complexity 1 33 0 276 111 0 0 chr17 11677056 11677101 -73761379 + (GA)n Simple_repeat Simple_repeat 2 46 0 1007 161 36 0 chr17 11677112 11677280 -73761200 - MLT1A2 LTR MaLR -200 174 1 2126 146 0 3 chr17 11677848 11678157 -73760323 + AluSg SINE Alu 1 308 -2 803 52 0 0 chr17 11678562 11678658 -73759822 - L1PA7 LINE L1 -479 5652 5557 * 3691 69 0 2 chr17 11678656 11679123 -73759357 + L1PA7 LINE L1 5683 6148 -6 2458 142 7 30 chr17 11679129 11679565 -73758915 - L1MB8 LINE L1 -5 6173 5748 334 286 0 20 chr17 11679597 11679695 -73758785 + LTR67 LTR ERVL 459 554 -3 203 0 37 0 chr17 11680388 11680415 -73758065 + (TTTTTG)n Simple_repeat Simple_repeat 5 32 0 786 263 129 54 chr17 11681648 11682021 -73756459 - MLT1I LTR MaLR -3 406 6 331 318 56 16 chr17 11682030 11682156 -73756324 + MIR SINE MIR 20 150 -58 222 37 0 0 chr17 11682369 11682396 -73756084 + (ATTG)n Simple_repeat Simple_repeat 1 27 0 2051 108 0 34 chr17 11682397 11682712 -73755768 - AluSp SINE Alu 0 305 1 1767 234 106 48 chr17 11682783 11683122 -73755358 + MLT1E LTR MaLR 15 400 -193 2524 70 0 16 chr17 11683122 11683435 -73755045 + AluY SINE Alu 1 308 -3 1767 234 106 48 chr17 11683435 11683642 -73754838 + MLT1E LTR MaLR 400 593 0 414 274 122 17 chr17 11683942 11684179 -73754301 + MIR SINE MIR 1 262 0 210 71 0 0 chr17 11684581 11684609 -73753871 + (TTAA)n Simple_repeat Simple_repeat 1 28 0 917 64 0 0 chr17 11684778 11684887 -73753593 + AluSg SINE Alu 1 109 -201 200 329 12 24 chr17 11685461 11685546 -73752934 + MIR SINE MIR 63 146 -62 256 335 60 22 chr17 11685604 11685789 -73752691 + MLT1J LTR MaLR 127 318 -193 2533 43 40 0 chr17 11686194 11686493 -73751987 + AluY SINE Alu 1 311 0 200 361 0 0 chr17 11686786 11686858 -73751622 - MIR SINE MIR 0 262 191 1300 206 35 45 chr17 11686858 11687242 -73751238 + L1ME1 LINE L1 5797 6333 -1 303 273 45 0 chr17 11687265 11687353 -73751127 + L1MB1 LINE L1 5746 5837 -333 2538 104 28 0 chr17 11687381 11687735 -73750745 + THE1B LTR MaLR 1 364 0 2182 100 0 23 chr17 11687935 11688234 -73750246 - AluSx SINE Alu -16 296 5 26 0 0 0 chr17 11688522 11688548 -73749932 + AT_rich Low_complexity Low_complexity 1 26 0 435 237 45 42 chr17 11688549 11688728 -73749752 - L1ME4a LINE L1 -158 5963 5784 898 137 0 0 chr17 11689492 11689623 -73748857 + AluSg/x SINE Alu 170 300 -12 22 0 0 0 chr17 11689757 11689779 -73748701 + AT_rich Low_complexity Low_complexity 1 22 0 47 78 0 0 chr17 11689810 11689913 -73748567 + AT_rich Low_complexity Low_complexity 1 103 0 762 299 23 23 chr17 11690014 11690275 -73748205 + MIR SINE MIR 2 262 0 2634 176 80 20 chr17 11690585 11690657 -73747823 - MER63 DNA MER1_type -37 1024 958 2255 106 0 7 chr17 11690657 11690959 -73747521 + AluSq SINE Alu 1 300 -13 2634 176 80 20 chr17 11690959 11691447 -73747033 - MER63 DNA MER1_type -103 958 430 368 243 87 27 chr17 11692279 11692418 -73746062 + MIR3 SINE MIR 34 181 -27 323 276 78 0 chr17 11694108 11694224 -73744256 + MIR3 SINE MIR 81 205 -3 2320 83 0 22 chr17 11695091 11695403 -73743077 - AluSg1 SINE Alu -4 305 1 209 281 0 18 chr17 11695654 11695711 -73742769 - MIR SINE MIR -136 72 17 477 279 25 6 chr17 11696929 11697087 -73741393 - MIR SINE MIR -59 203 43 869 168 8 107 chr17 11697127 11697371 -73741109 - L1MA10 LINE L1 0 6334 6115 1499 173 49 20 chr17 11697374 11697720 -73740760 + L1MB1 LINE L1 5812 6167 -22 2393 63 0 0 chr17 11699031 11699315 -73739165 + AluY SINE Alu 25 308 -3 2482 72 0 3 chr17 11701269 11701573 -73736907 + AluSc SINE Alu 2 304 -5 2994 139 4 44 chr17 11701832 11701967 -73736513 + L1PB4 LINE L1 5651 5790 -366 2219 121 0 13 chr17 11701967 11702100 -73736380 + AluSx SINE Alu 4 137 -175 2307 81 3 7 chr17 11702100 11702396 -73736084 + AluSc SINE Alu 1 295 -14 2219 121 0 13 chr17 11702396 11702568 -73735912 + AluSx SINE Alu 137 305 -7 2994 139 4 44 chr17 11702568 11702956 -73735524 + L1PB4 LINE L1 5790 6153 -3 326 175 0 0 chr17 11704785 11704842 -73733638 - AluS SINE Alu -246 57 1 1055 157 6 0 chr17 11704850 11705028 -73733452 - L1MB1 LINE L1 -70 6119 5941 2134 131 33 46 chr17 11705634 11705792 -73732688 + THE1B LTR MaLR 3 162 -202 2160 105 24 3 chr17 11705792 11706086 -73732394 - AluY SINE Alu -11 300 1 2134 131 33 46 chr17 11706086 11706294 -73732186 + THE1B LTR MaLR 162 364 0 258 32 0 0 chr17 11706375 11706406 -73732074 + (TG)n Simple_repeat Simple_repeat 2 32 0 6058 106 5 20 chr17 11706550 11708274 -73730206 + L1PA14 LINE L1 4439 6159 -2 2102 78 4 8 chr17 11708413 11708681 -73729799 - AluSq SINE Alu -24 289 23 221 56 0 28 chr17 11709386 11709422 -73729058 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 1494 97 0 10 chr17 11709422 11709618 -73728862 - AluSc SINE Alu -32 277 84 957 283 86 52 chr17 11709886 11710773 -73727707 - L1M4 LINE L1 -1541 4605 3689 377 308 118 21 chr17 11710898 11711641 -73726839 - L1M4 LINE L1 -2683 3463 2649 804 174 0 8 chr17 11711803 11711935 -73726545 - FLAM_C SINE Alu -2 131 1 441 329 52 41 chr17 11712017 11712479 -73726001 + L1M4 LINE L1 4553 5019 -1127 2441 84 0 0 chr17 11712712 11713011 -73725469 + AluY SINE Alu 11 309 -2 2093 111 0 74 chr17 11713739 11714063 -73724417 - AluSg SINE Alu -10 300 1 233 354 120 6 chr17 11714710 11714868 -73723612 - L2 LINE L2 0 3272 3097 378 275 9 18 chr17 11715020 11715129 -73723351 - HAL1 LINE L1 -586 1921 1814 536 270 147 5 chr17 11715160 11715371 -73723109 - HAL1 LINE L1 -766 1741 1501 1080 82 94 13 chr17 11715412 11715571 -73722909 + THE1C LTR MaLR 1 172 -203 832 164 31 13 chr17 11715757 11715916 -73722564 + THE1C LTR MaLR 180 341 -34 254 269 71 91 chr17 11716245 11716553 -73721927 - HAL1 LINE L1 -1361 1146 845 2327 92 0 0 chr17 11717958 11718252 -73720228 + AluSg SINE Alu 1 294 -16 207 359 59 12 chr17 11718321 11718491 -73719989 - L2 LINE L2 -226 3046 2869 711 364 30 21 chr17 11718612 11719087 -73719393 - L2 LINE L2 -608 2706 2228 187 333 8 68 chr17 11720105 11720222 -73718258 - MIR SINE MIR -61 147 38 310 111 0 0 chr17 11720453 11720498 -73717982 + MADE1 DNA Mariner 1 45 -35 527 127 13 0 chr17 11720626 11720705 -73717775 + MADE1 DNA Mariner 1 80 0 349 186 186 29 chr17 11721020 11721160 -73717320 + L1ME4a LINE L1 5764 5925 -196 273 180 37 149 chr17 11721263 11721424 -73717056 + MIR SINE MIR 48 190 -72 1208 187 190 13 chr17 11721493 11721803 -73716677 + MLT1A1 LTR MaLR 1 365 0 1093 297 17 26 chr17 11722356 11722774 -73715706 + L1ME4a LINE L1 5457 5870 -251 2174 138 0 0 chr17 11723406 11723704 -73714776 + AluSx SINE Alu 2 299 -13 601 294 44 24 chr17 11723805 11724057 -73714423 - MIR SINE MIR 0 262 6 454 303 14 0 chr17 11725796 11725941 -73712539 - MIR SINE MIR 0 262 116 538 172 31 31 chr17 11725949 11726077 -73712403 + L1MD3 LINE L1 7858 7985 -10 319 309 0 11 chr17 11726089 11726183 -73712297 - MIR SINE MIR -157 105 13 2118 93 0 0 chr17 11726367 11726676 -73711804 + AluY SINE Alu 17 325 0 1051 186 14 41 chr17 11726699 11726919 -73711561 + MER20 DNA MER1_type 6 219 0 593 230 8 16 chr17 11727022 11727148 -73711332 + MER5A DNA MER1_type 65 189 0 580 282 0 12 chr17 11727621 11727791 -73710689 + MER5B DNA MER1_type 4 171 -7 499 131 0 0 chr17 11727862 11727946 -73710534 - MER5A DNA MER1_type -80 109 26 2359 73 0 32 chr17 11728200 11728516 -73709964 - AluY SINE Alu -5 306 1 5222 26 5 3 chr17 11730076 11730687 -73707793 + L1PA4 LINE L1 5544 6155 0 483 259 0 0 chr17 11730797 11730963 -73707517 + (CAT)n Simple_repeat Simple_repeat 2 167 0 918 188 0 0 chr17 11730994 11731356 -73707124 + (CAT)n Simple_repeat Simple_repeat 1 362 0 532 206 119 46 chr17 11731360 11731554 -73706926 - MIR SINE MIR -10 252 45 402 250 0 0 chr17 11731617 11731699 -73706781 + Charlie8 DNA MER1_type 106 187 -2230 648 243 0 14 chr17 11731699 11731839 -73706641 + MER63 DNA MER1_type 1 764 -298 209 308 77 56 chr17 11733161 11733356 -73705124 + MIR SINE MIR 50 248 -14 191 30 0 61 chr17 11734732 11734765 -73703715 + (CAAAAA)n Simple_repeat Simple_repeat 2 32 0 2479 93 0 3 chr17 11735008 11735319 -73703161 - AluSg SINE Alu 0 310 1 320 270 54 9 chr17 11735635 11735746 -73702734 - MER103 DNA DNA -7 159 44 2263 117 0 0 chr17 11736199 11736497 -73701983 - AluSx SINE Alu -10 302 5 559 243 181 25 chr17 11736582 11736825 -73701655 - L2 LINE L2 -5 3308 3028 3504 133 21 6 chr17 11736861 11737380 -73701100 + MER1A DNA MER1_type 1 527 0 3377 104 22 85 chr17 11737462 11738088 -73700392 + L1MA4 LINE L1 5711 6297 -3 2450 65 0 19 chr17 11738113 11738420 -73700060 + AluY SINE Alu 1 301 -10 204 162 40 54 chr17 11740364 11740438 -73698042 + (TCTA)n Simple_repeat Simple_repeat 3 75 0 231 36 0 0 chr17 11740447 11740475 -73698005 + (TC)n Simple_repeat Simple_repeat 1 28 0 290 73 0 36 chr17 11740771 11740826 -73697654 + (CAAAAA)n Simple_repeat Simple_repeat 2 54 0 480 238 14 28 chr17 11740960 11741103 -73697377 + MARNA DNA Mariner 9 149 -437 1421 62 0 0 chr17 11741660 11741837 -73696643 + L1PA5 LINE L1 5978 6154 0 206 367 61 0 chr17 11742260 11742358 -73696122 - MIR3 SINE MIR -34 174 71 292 264 64 18 chr17 11743337 11743447 -73695033 + L2 LINE L2 3199 3313 0 2086 195 50 82 chr17 11743564 11743909 -73694571 + L1ME1 LINE L1 5584 5904 -262 1656 192 0 10 chr17 11743909 11744200 -73694280 + AluJb SINE Alu 1 288 -24 2086 195 50 82 chr17 11744200 11744449 -73694031 + L1ME1 LINE L1 5904 6159 -7 834 132 0 83 chr17 11744690 11744834 -73693646 - FLAM_C SINE Alu 0 133 2 256 216 13 90 chr17 11745537 11745626 -73692854 - MIR3 SINE MIR -13 195 102 2310 107 10 0 chr17 11745705 11746014 -73692466 + AluSx SINE Alu 1 312 0 237 302 42 10 chr17 11746225 11746321 -73692159 + MIR SINE MIR 24 122 -140 436 292 54 71 chr17 11746504 11746744 -73691736 - L3 LINE CR1 -8 1569 1334 2119 182 133 7 chr17 11747008 11747577 -73690903 - MLT1E2 LTR MaLR 0 626 1 472 319 60 5 chr17 11747694 11747910 -73690570 + L3 LINE CR1 716 943 -634 377 330 35 20 chr17 11747992 11748195 -73690285 - L3 LINE CR1 -348 1229 1024 2564 199 51 57 chr17 11748413 11748527 -73689953 + L1MB7 LINE L1 5076 5189 -995 4805 89 5 0 chr17 11748527 11749178 -73689302 + L1PA14 LINE L1 5499 6152 -9 2564 199 51 57 chr17 11749178 11749864 -73688616 + L1MB7 LINE L1 5189 5867 -317 85 11 0 0 chr17 11749869 11749961 -73688519 + AT_rich Low_complexity Low_complexity 1 92 0 987 113 0 0 chr17 11749961 11750221 -73688259 + (TA)n Simple_repeat Simple_repeat 1 260 0 641 309 140 38 chr17 11750781 11751251 -73687229 + MLT1K LTR MaLR 67 584 -4 341 337 84 15 chr17 11751374 11751635 -73686845 + L1ME4a LINE L1 5270 5548 -811 696 259 60 14 chr17 11751684 11751966 -73686514 + L1ME4a LINE L1 5629 5923 -198 355 333 68 0 chr17 11753147 11753279 -73685201 - L2 LINE L2 -3 3269 3129 371 328 139 27 chr17 11753835 11754029 -73684451 - L2 LINE L2 0 3313 3142 378 0 0 0 chr17 11754029 11754071 -73684409 + (TC)n Simple_repeat Simple_repeat 2 43 0 * 504 0 0 0 chr17 11754070 11754126 -73684354 + (TG)n Simple_repeat Simple_repeat 1 56 0 371 328 139 27 chr17 11754071 11754340 -73684140 - L2 LINE L2 -171 3142 2859 202 322 100 11 chr17 11755642 11755732 -73682748 + L2 LINE L2 3134 3231 -41 1697 139 43 7 chr17 11756212 11756514 -73681966 - L1MA4A LINE L1 -6 6297 5985 299 311 91 15 chr17 11756523 11756655 -73681825 - MIR SINE MIR -74 188 47 2265 73 4 0 chr17 11757230 11757503 -73680977 + AluSp SINE Alu 28 301 -12 2572 61 7 3 chr17 11758965 11759275 -73679205 - AluY SINE Alu 0 311 1 361 306 136 13 chr17 11759293 11759669 -73678811 + L2 LINE L2 1817 2238 -1076 2188 115 0 10 chr17 11760104 11760417 -73678063 + AluSx SINE Alu 1 310 -2 284 186 52 93 chr17 11760471 11760568 -73677912 + L2 LINE L2 3197 3289 -24 2439 87 0 0 chr17 11762817 11763117 -73675363 - AluSg SINE Alu -10 300 1 237 128 81 12 chr17 11763680 11763766 -73674714 + (TA)n Simple_repeat Simple_repeat 2 93 0 300 106 25 62 chr17 11763804 11763965 -73674515 + (TTATA)n Simple_repeat Simple_repeat 5 159 0 39 80 0 0 chr17 11764014 11764102 -73674378 + AT_rich Low_complexity Low_complexity 1 88 0 23 33 0 0 chr17 11764597 11764627 -73673853 + AT_rich Low_complexity Low_complexity 1 30 0 1700 146 56 8 chr17 11764939 11765207 -73673273 + AluJo SINE Alu 11 291 -21 2093 238 108 35 chr17 11765515 11766240 -73672240 + L1MC4a LINE L1 5520 6303 -1505 902 204 44 0 chr17 11766261 11766442 -73672038 + MER5A DNA MER1_type 1 189 0 212 295 101 36 chr17 11766472 11766611 -73671869 - MIR SINE MIR -65 197 50 1931 122 7 4 chr17 11766898 11767355 -73671125 + AluY SINE Alu 1 458 0 1288 84 0 0 chr17 11767177 11767484 -73670996 + (GAAA)n Simple_repeat Simple_repeat 1 307 0 1630 171 67 131 chr17 11768375 11768527 -73669953 - Charlie1b DNA MER1_type -2261 500 340 2099 109 0 44 chr17 11768527 11768848 -73669632 + AluSx SINE Alu 1 307 -5 1630 171 67 131 chr17 11768848 11768873 -73669607 - Charlie1b DNA MER1_type -2421 340 315 2133 93 0 31 chr17 11768873 11769164 -73669316 + AluSg SINE Alu 1 282 -28 1630 171 67 131 chr17 11769164 11769506 -73668974 - Charlie1b DNA MER1_type -2446 315 13 521 252 8 0 chr17 11769800 11769923 -73668557 - MIR SINE MIR -93 169 46 2466 81 3 0 chr17 11769985 11770292 -73668188 + AluSg SINE Alu 1 308 -2 2377 95 3 0 chr17 11772964 11773270 -73665210 - AluSg SINE Alu -3 307 1 495 246 106 0 chr17 11773347 11773489 -73664991 + MER5B DNA MER1_type 1 157 -21 1633 129 4 4 chr17 11773999 11774232 -73664248 - AluSc SINE Alu -76 233 1 213 214 0 0 chr17 11774511 11774553 -73663927 + (TG)n Simple_repeat Simple_repeat 2 43 0 2352 86 0 0 chr17 11775993 11776284 -73662196 + AluY SINE Alu 12 302 -9 2177 108 0 0 chr17 11778614 11778918 -73659562 + AluSg SINE Alu 1 304 0 515 295 123 4 chr17 11778986 11779213 -73659267 + MARNA DNA Mariner 244 497 -89 672 203 25 19 chr17 11779283 11779441 -73659039 - MER5B DNA MER1_type -2 176 18 284 243 122 0 chr17 11779538 11779612 -73658868 + L2 LINE L2 3188 3270 -2 842 183 0 7 chr17 11779685 11779822 -73658658 + FRAM SINE Alu 16 151 -25 280 71 0 24 chr17 11779965 11780007 -73658473 + MER5B DNA MER1_type 18 58 -120 711 297 22 5 chr17 11780049 11780271 -73658209 - MIR SINE MIR -26 236 11 349 228 61 26 chr17 11782505 11782619 -73655861 + L1MC4a LINE L1 7480 7597 -211 612 266 78 56 chr17 11782969 11783707 -73654773 + L1ME3 LINE L1 902 1719 -4677 1854 110 0 8 chr17 11783769 11784050 -73654430 + AluSg SINE Alu 40 318 0 4565 281 87 20 chr17 11784318 11785503 -73652977 + L1ME3 LINE L1 2108 3212 -3003 2434 87 3 3 chr17 11785503 11785813 -73652667 + AluSp SINE Alu 1 310 -3 4565 281 87 20 chr17 11785813 11787219 -73651261 + L1ME3 LINE L1 3212 4834 -1381 1151 273 88 47 chr17 11787257 11788143 -73650337 + L1ME3 LINE L1 5080 6001 -230 253 157 0 57 chr17 11788173 11788243 -73650237 + (CATATA)n Simple_repeat Simple_repeat 3 68 0 2243 293 174 30 chr17 11788444 11789964 -73648516 - L2 LINE L2 -1481 1833 95 24 32 0 0 chr17 11790014 11790045 -73648435 + AT_rich Low_complexity Low_complexity 1 31 0 243 265 20 82 chr17 11790103 11790201 -73648279 - MIR3 SINE MIR -6 202 111 2222 196 34 69 chr17 11790327 11790879 -73647601 + MER74A LTR ERVL 26 558 0 2207 115 3 0 chr17 11791083 11791379 -73647101 + AluSp SINE Alu 1 297 -16 2277 116 0 0 chr17 11793399 11793701 -73644779 - AluSg SINE Alu -8 302 1 404 251 67 130 chr17 11794124 11794439 -73644041 + MLT1J2 LTR MaLR 2 296 -154 226 191 24 0 chr17 11795291 11795333 -73643147 - MLT1J2 LTR MaLR -154 296 254 291 28 0 0 chr17 11797777 11797813 -73640667 + (TC)n Simple_repeat Simple_repeat 1 36 0 236 347 46 46 chr17 11798580 11798776 -73639704 + L1ME2 LINE L1 140 335 -6061 2842 13 0 0 chr17 11799031 11799338 -73639142 + AluYa5 SINE Alu 1 307 -4 351 246 50 68 chr17 11799338 11799558 -73638922 + L1ME2 LINE L1 677 892 -5504 3225 246 60 61 chr17 11799670 11801463 -73637017 + L1ME2 LINE L1 1256 3010 -3205 1954 176 0 0 chr17 11801463 11801770 -73636710 + AluSx SINE Alu 1 307 -5 3225 246 60 61 chr17 11801770 11802156 -73636324 + L1ME2 LINE L1 3010 3395 -2820 3267 103 50 95 chr17 11802163 11802784 -73635696 - LTR14B LTR ERVK 0 608 16 4844 261 64 20 chr17 11802790 11805499 -73632981 + L1ME2 LINE L1 3406 6233 0 3724 82 4 4 chr17 11805649 11806158 -73632322 + L1PB1 LINE L1 5282 5790 -361 267 189 0 0 chr17 11806158 11806211 -73632269 + (TATATG)n Simple_repeat Simple_repeat 3 55 0 1796 63 0 0 chr17 11806211 11806432 -73632048 - L1PB1 LINE L1 -148 6003 5783 213 255 20 0 chr17 11806433 11806484 -73631996 + (TATATG)n Simple_repeat Simple_repeat 1 52 0 306 0 0 0 chr17 11806700 11806734 -73631746 + (CA)n Simple_repeat Simple_repeat 2 35 0 2148 59 4 0 chr17 11806734 11807006 -73631474 + L1PB1 LINE L1 5793 6065 -86 530 272 97 67 chr17 11807212 11807407 -73631073 + MIR SINE MIR 62 262 0 195 136 51 0 chr17 11807641 11807700 -73630780 + (TAGA)n Simple_repeat Simple_repeat 4 65 0 2781 13 0 3 chr17 11807707 11808012 -73630468 - AluY SINE Alu -7 304 1 195 204 0 0 chr17 11808151 11808195 -73630285 + (TGGA)n Simple_repeat Simple_repeat 3 46 0 2670 46 0 0 chr17 11809501 11809805 -73628675 + AluY SINE Alu 1 304 -7 298 264 83 42 chr17 11810156 11810300 -73628180 + L2 LINE L2 3077 3226 -87 625 310 80 15 chr17 11812214 11812606 -73625874 + L1ME LINE L1 5282 5726 -395 552 203 123 18 chr17 11812606 11812769 -73625711 - MER104 DNA MER2_type 0 180 1 625 310 80 15 chr17 11812769 11812826 -73625654 + L1ME LINE L1 5726 5778 -343 2355 99 0 3 chr17 11812940 11813242 -73625238 - AluSp SINE Alu -12 301 1 917 182 144 0 chr17 11814085 11814272 -73624208 - MER20 DNA MER1_type -4 215 2 225 282 21 134 chr17 11814361 11814503 -73623977 + L2 LINE L2 3144 3269 -3 948 92 0 0 chr17 11814688 11814808 -73623672 + AluSp/q SINE Alu 176 295 -18 2292 100 3 0 chr17 11815155 11815454 -73623026 - AluSp SINE Alu -13 300 1 183 296 169 14 chr17 11815625 11815696 -73622784 - L2 LINE L2 -2 3270 3189 919 81 0 0 chr17 11815789 11815900 -73622580 + AluSp SINE Alu 23 133 -180 2502 84 0 0 chr17 11815907 11816218 -73622262 + AluY SINE Alu 1 311 0 235 323 151 35 chr17 11816403 11816747 -73621733 - L2 LINE L2 -410 2904 2521 2269 189 39 11 chr17 11817839 11818300 -73620180 + MER7C DNA MER2_type 1 474 -128 663 190 190 0 chr17 11818448 11818585 -73619895 + MER7C DNA MER2_type 441 603 0 22 0 0 0 chr17 11818640 11818662 -73619818 + AT_rich Low_complexity Low_complexity 1 22 0 2236 72 3 46 chr17 11819524 11819829 -73618651 - AluSq SINE Alu -21 292 1 736 247 153 33 chr17 11819978 11820330 -73618150 + LTR16A LTR ERVL 59 450 0 332 298 8 41 chr17 11820490 11820611 -73617869 + MIR SINE MIR 30 146 -62 366 302 44 28 chr17 11821162 11821344 -73617136 - MER5A DNA MER1_type -4 185 1 343 148 30 178 chr17 11822019 11822087 -73616393 - MER5B DNA MER1_type -62 116 76 1841 137 30 4 chr17 11822087 11822358 -73616122 - AluSq SINE Alu -35 278 1 343 148 30 178 chr17 11822358 11822424 -73616056 - MER5B DNA MER1_type -102 76 2 319 289 8 66 chr17 11822425 11822546 -73615934 + MIR SINE MIR 89 202 -60 348 281 93 29 chr17 11822640 11822779 -73615701 + Charlie8 DNA MER1_type 79 226 -2191 1881 208 83 88 chr17 11822859 11823401 -73615079 + MLT1E2 LTR MaLR 3 544 -82 2102 123 0 7 chr17 11823401 11823694 -73614786 + AluSg SINE Alu 1 291 -19 1881 208 83 88 chr17 11823694 11823754 -73614726 + MLT1E2 LTR MaLR 544 603 -23 209 289 66 33 chr17 11824094 11824215 -73614265 + L2 LINE L2 2936 3060 -212 256 208 0 19 chr17 11824386 11824439 -73614041 - L2 LINE L2 -3 3310 3259 1007 169 6 0 chr17 11824474 11824634 -73613846 - FRAM SINE Alu -5 161 1 205 156 0 0 chr17 11824759 11824791 -73613689 + MIR SINE MIR 220 251 -11 2187 85 7 27 chr17 11825782 11826105 -73612375 + AluSg1 SINE Alu 1 317 0 338 266 31 47 chr17 11826561 11826605 -73611875 + MER58C DNA MER1_type 75 118 -2302 1927 137 3 47 chr17 11826605 11826927 -73611553 + AluSx SINE Alu 1 308 -4 338 266 31 47 chr17 11826927 11827010 -73611470 + MER58C DNA MER1_type 118 200 -15 544 296 148 17 chr17 11828587 11828884 -73609596 - L3 LINE CR1 -59 1518 1183 457 143 66 0 chr17 11830028 11830119 -73608361 + MER53 DNA DNA 2 98 -91 1570 104 19 5 chr17 11830431 11830643 -73607837 - AluSg/x SINE Alu -16 296 82 1386 98 0 45 chr17 11831129 11831353 -73607127 - L1MA9 LINE L1 0 6312 6099 2021 65 0 15 chr17 11831354 11831616 -73606864 - L1PA8 LINE L1 0 6172 5915 2144 79 0 0 chr17 11831635 11831933 -73606547 - AluSc SINE Alu 0 298 1 1379 151 17 0 chr17 11831933 11832172 -73606308 - L1MA9 LINE L1 -203 6109 5867 2399 31 14 0 chr17 11832698 11832984 -73605496 + L1PA4 LINE L1 5866 6155 0 312 299 85 28 chr17 11833534 11833711 -73604769 + MIR SINE MIR 65 251 -11 315 270 191 62 chr17 11834957 11835198 -73603282 + L2 LINE L2 3042 3313 0 467 322 139 27 chr17 11835223 11835459 -73603021 + L3 LINE CR1 1119 1412 -165 300 200 40 0 chr17 11835459 11835534 -73602946 + MER116 DNA Mariner 3 80 0 467 322 139 27 chr17 11835534 11835663 -73602817 + L3 LINE CR1 1412 1525 -52 485 253 71 93 chr17 11835949 11836131 -73602349 + MIR SINE MIR 5 182 -80 189 0 0 0 chr17 11836988 11837009 -73601471 + (TG)n Simple_repeat Simple_repeat 1 21 0 233 143 0 20 chr17 11837323 11837372 -73601108 + (GGAA)n Simple_repeat Simple_repeat 1 48 0 301 254 69 95 chr17 11837392 11837554 -73600926 + MIR SINE MIR 1 159 -103 2139 112 0 0 chr17 11837554 11837859 -73600621 - AluSx SINE Alu -7 305 1 301 254 69 95 chr17 11837859 11837885 -73600595 + MIR SINE MIR 159 184 -78 2291 106 0 0 chr17 11838812 11839123 -73599357 + AluSp SINE Alu 1 311 -2 2254 73 3 20 chr17 11839985 11840286 -73598194 - AluSg SINE Alu -14 296 1 243 246 33 0 chr17 11840437 11840498 -73597982 + L2 LINE L2 3242 3304 -9 2258 90 0 0 chr17 11840657 11840958 -73597522 - AluSg SINE Alu -9 301 1 2112 113 3 7 chr17 11841553 11841855 -73596625 - AluSg SINE Alu -9 301 1 1614 151 10 36 chr17 11841856 11842160 -73596320 - AluJb SINE Alu -16 296 1 269 261 115 48 chr17 11842659 11842824 -73595656 + MLT1K LTR MaLR 122 297 -291 466 213 40 47 chr17 11842998 11843148 -73595332 + MLT1K LTR MaLR 438 586 -2 328 274 189 55 chr17 11843181 11843382 -73595098 + MIR SINE MIR 35 262 0 2460 57 0 0 chr17 11843484 11843780 -73594700 - AluSc SINE Alu -13 296 1 402 216 22 147 chr17 11843931 11844162 -73594318 - MIR SINE MIR -59 203 2 377 335 91 36 chr17 11844981 11845202 -73593278 + MIR SINE MIR 23 255 -7 561 93 0 1 chr17 11845252 11845331 -73593149 - L1PA6 LINE L1 -174 5980 5910 535 45 0 0 chr17 11845331 11845390 -73593090 + L1PA5 LINE L1 6076 6141 -13 216 295 102 60 chr17 11845761 11845927 -73592553 - MIR SINE MIR -3 259 87 2024 122 0 13 chr17 11846480 11846783 -73591697 - AluSx SINE Alu -13 299 1 565 194 45 65 chr17 11846839 11846994 -73591486 + MER63 DNA MER1_type 1 778 -58 1516 178 18 96 chr17 11847134 11847528 -73590952 + MLT1A1 LTR MaLR 1 363 -2 552 237 23 28 chr17 11848255 11848432 -73590048 + MER113 DNA MER1_type? 9 184 -337 1830 108 56 14 chr17 11848460 11848746 -73589734 - AluSc SINE Alu -11 298 1 197 289 0 0 chr17 11850061 11850106 -73588374 - MIR SINE MIR -83 125 81 213 146 24 0 chr17 11851695 11851736 -73586744 + A-rich Low_complexity Low_complexity 2 43 0 637 360 23 13 chr17 11851998 11852298 -73586182 - L3 LINE CR1 -63 1514 1212 351 227 150 72 chr17 11853015 11853222 -73585258 + L1MEd LINE L1 59 281 -5838 2371 219 19 27 chr17 11854068 11854216 -73584264 + LTR53 LTR ERVL 1 149 -370 2212 106 0 10 chr17 11854216 11854528 -73583952 + AluSx SINE Alu 1 309 -3 2371 219 19 27 chr17 11854528 11854899 -73583581 + LTR53 LTR ERVL 149 516 -3 437 314 157 21 chr17 11855088 11855324 -73583156 + MLT1K LTR MaLR 208 475 -113 1904 84 4 8 chr17 11855384 11855647 -73582833 + AluSc SINE Alu 47 308 -1 282 337 59 10 chr17 11856076 11856177 -73582303 + L2 LINE L2 3167 3272 0 1634 140 11 21 chr17 11856284 11856608 -73581872 + AluJo SINE Alu 1 321 0 6085 266 102 34 chr17 11856624 11857764 -73580716 - L2 LINE L2 0 3313 2253 2100 111 0 3 chr17 11857764 11858061 -73580419 + AluSg SINE Alu 1 296 -14 6085 266 102 34 chr17 11858061 11859731 -73578749 - L2 LINE L2 -1060 2253 297 206 367 61 0 chr17 11859750 11859848 -73578632 - MIR SINE MIR 0 262 159 312 211 0 0 chr17 11860692 11860763 -73577717 + CT-rich Low_complexity Low_complexity 4 74 0 1749 193 76 36 chr17 11860832 11861282 -73577198 + L1MB1 LINE L1 5701 6168 0 871 158 0 0 chr17 11861304 11861431 -73577049 + FLAM_C SINE Alu 1 127 -6 497 223 28 2 chr17 11861438 11861576 -73576904 - L1ME1 LINE L1 -334 5832 5689 229 351 79 12 chr17 11861650 11861815 -73576665 + L2 LINE L2 2889 3064 -208 726 169 174 0 chr17 11864067 11864245 -73574235 + MER3 DNA MER1_type 1 209 0 1598 174 14 4 chr17 11864357 11864638 -73573842 - AluJo SINE Alu -22 290 7 2829 191 11 15 chr17 11865783 11866327 -73572153 - MLT1F LTR MaLR 0 542 1 453 280 31 34 chr17 11866875 11867144 -73571336 + L1ME3A LINE L1 5676 5945 -219 324 236 121 80 chr17 11867206 11867369 -73571111 + L1ME3A LINE L1 5963 6137 -33 4306 117 11 3 chr17 11867369 11867976 -73570504 - LTR9 LTR ERV1 0 612 1 324 236 121 80 chr17 11867976 11868011 -73570469 + L1ME3A LINE L1 6137 6169 -1 1322 149 4 26 chr17 11868266 11868494 -73569986 - AluSx SINE Alu -89 223 1 262 236 0 0 chr17 11868504 11868559 -73569921 - HAL1b LINE L1 -916 432 378 2571 158 209 24 chr17 11869760 11870374 -73568106 + LTR8A LTR ERV1 1 727 0 2092 124 72 26 chr17 11870466 11870814 -73567666 + THE1B LTR MaLR 1 364 0 452 216 78 9 chr17 11870869 11870985 -73567495 - MLT2E LTR ERVL 0 628 505 494 221 39 44 chr17 11871196 11871377 -73567103 - MER53 DNA DNA -9 180 1 1548 183 9 56 chr17 11871560 11871883 -73566597 - MLT1B LTR MaLR 0 390 83 1472 186 11 11 chr17 11872165 11872445 -73566035 + LTR4 LTR ERV1 317 596 0 247 171 24 110 chr17 11872446 11872485 -73565995 - MLT1B LTR MaLR -305 85 55 4073 177 40 25 chr17 11872485 11873125 -73565355 - LTR39 LTR ERV1 0 783 128 2239 91 0 3 chr17 11873125 11873422 -73565058 - AluY SINE Alu -15 296 1 4073 177 40 25 chr17 11873422 11873550 -73564930 - LTR39 LTR ERV1 -655 128 3 247 171 24 110 chr17 11873550 11873592 -73564888 - MLT1B LTR MaLR -335 55 11 1435 214 148 30 chr17 11873653 11874153 -73564327 - MER89 LTR ERV1 0 559 1 1018 234 9 22 chr17 11874413 11874639 -73563841 + MER58A DNA MER1_type 1 223 -1 1060 288 52 57 chr17 11874752 11875173 -73563307 + MLT1K LTR MaLR 33 452 -136 1980 112 35 0 chr17 11875173 11875460 -73563020 - AluY SINE Alu -14 297 1 1060 288 52 57 chr17 11875460 11875580 -73562900 + MLT1K LTR MaLR 452 571 -17 554 311 12 12 chr17 11876471 11876638 -73561842 + MER5B DNA MER1_type 3 169 -9 752 199 39 11 chr17 11877102 11877283 -73561197 + MER5A DNA MER1_type 1 186 -3 1717 155 28 34 chr17 11877446 11877769 -73560711 - MER89 LTR ERV1 -1 558 238 1291 183 8 8 chr17 11877770 11878010 -73560470 + MLT2B1 LTR ERVL 1 240 -280 242 246 31 0 chr17 11878023 11878088 -73560392 + MER52A LTR ERV1 1 67 -1688 5666 188 80 42 chr17 11878653 11879962 -73558518 + MER52A LTR ERV1 319 1755 0 775 217 6 19 chr17 11879962 11880113 -73558367 + MLT2B3 LTR ERVL 240 388 -166 1758 156 0 0 chr17 11880113 11880370 -73558110 - ERVL LTR ERVL -878 4886 4630 714 169 0 24 chr17 11880372 11880496 -73557984 + MLT1A1 LTR MaLR 211 331 -34 * 1878 207 31 3 chr17 11880474 11880827 -73557653 - MLT2B2 LTR ERVL -152 363 1 550 196 0 6 chr17 11880827 11880970 -73557510 - MER89 LTR ERV1 -318 241 1 718 228 24 24 chr17 11881676 11881843 -73556637 + MLT2B1 LTR ERVL 1 167 -353 22 0 0 0 chr17 11882059 11882081 -73556399 + AT_rich Low_complexity Low_complexity 1 22 0 361 322 69 23 chr17 11882577 11882838 -73555642 - L2 LINE L2 -123 3190 2918 1070 87 0 27 chr17 11882853 11883003 -73555477 + AluSg/x SINE Alu 167 312 0 499 301 130 16 chr17 11883013 11883329 -73555151 - L2 LINE L2 -410 2904 2553 2276 114 3 0 chr17 11883368 11883667 -73554813 + AluSp SINE Alu 1 300 -13 21 0 0 0 chr17 11884468 11884489 -73553991 + AT_rich Low_complexity Low_complexity 1 21 0 419 213 66 33 chr17 11885299 11885421 -73553059 + MIR SINE MIR 97 222 -40 2442 92 0 0 chr17 11886196 11886502 -73551978 + AluSg SINE Alu 2 307 -3 499 311 196 3 chr17 11886830 11887171 -73551309 + L2 LINE L2 1146 1552 -1762 2193 124 3 7 chr17 11887258 11887564 -73550916 + AluSx SINE Alu 1 305 -7 302 372 88 20 chr17 11887615 11887737 -73550743 + L2 LINE L2 1802 1914 -1400 1532 59 5 30 chr17 11887737 11887939 -73550541 - MER107 DNA MER1_type 0 197 1 302 372 88 20 chr17 11887939 11888157 -73550323 + L2 LINE L2 1914 2165 -1149 429 339 43 5 chr17 11888559 11888745 -73549735 - MIR3 SINE MIR -14 194 2 226 316 61 35 chr17 11890336 11890450 -73548030 - MIR SINE MIR -63 145 29 244 157 214 0 chr17 11890883 11890953 -73547527 - MIR SINE MIR -73 189 105 220 307 68 0 chr17 11891004 11891092 -73547388 - L2 LINE L2 -408 2905 2812 466 209 144 7 chr17 11891126 11891265 -73547215 - MIR SINE MIR 0 262 105 2453 157 2 15 chr17 11891687 11892095 -73546385 - MER57A LTR ERV1 0 403 1 2449 97 14 8 chr17 11892292 11892643 -73545837 + THE1A LTR MaLR 3 355 0 661 248 75 75 chr17 11892983 11893290 -73545190 - L1ME3A LINE L1 -4 6235 5929 4112 255 79 37 chr17 11893332 11895440 -73543040 - L1MEc LINE L1 -1945 4270 2111 515 277 83 25 chr17 11895637 11895915 -73542565 - L1MEc LINE L1 -4561 1835 1542 1911 151 3 7 chr17 11896076 11896361 -73542119 + AluSx SINE Alu 4 287 -25 2226 95 28 0 chr17 11896643 11896928 -73541552 + AluSp SINE Alu 1 293 -20 256 299 95 14 chr17 11897490 11897637 -73540843 + MIR SINE MIR 69 227 -35 342 272 39 10 chr17 11897791 11897894 -73540586 - MIR SINE MIR -87 175 70 250 263 0 0 chr17 11898489 11898546 -73539934 - L3 LINE CR1 -5 1572 1516 2411 62 0 55 chr17 11898680 11899005 -73539475 - AluY SINE Alu -4 307 1 414 274 104 52 chr17 11899103 11899373 -73539107 - L3 LINE CR1 -298 1279 996 1706 40 0 0 chr17 11899523 11899724 -73538756 + L1PA5 LINE L1 5948 6148 -6 2236 105 3 7 chr17 11902795 11903101 -73535379 + AluSg SINE Alu 1 305 -5 201 39 0 0 chr17 11903101 11903127 -73535353 + (GA)n Simple_repeat Simple_repeat 2 27 0 949 285 93 118 chr17 11903184 11903998 -73534482 + L2 LINE L2 124 957 -2357 207 0 0 0 chr17 11903998 11904021 -73534459 + (TTTTA)n Simple_repeat Simple_repeat 4 26 0 760 91 0 0 chr17 11904023 11904122 -73534358 - AluSg/x SINE Alu -25 285 187 949 285 93 118 chr17 11904122 11904227 -73534253 + L2 LINE L2 958 1064 -2250 2098 120 10 3 chr17 11904227 11904528 -73533952 - AluSx SINE Alu -9 303 1 949 285 93 118 chr17 11904528 11905272 -73533208 + L2 LINE L2 1064 1845 -1469 205 239 0 0 chr17 11905477 11905523 -73532957 + L2 LINE L2 3207 3252 -20 218 315 63 16 chr17 11905529 11905656 -73532824 - L2 LINE L2 -160 3153 3021 677 241 74 19 chr17 11905684 11905900 -73532580 - MIR SINE MIR -29 233 6 338 277 71 18 chr17 11905920 11906032 -73532448 + L2 LINE L2 3137 3254 -18 2350 80 7 10 chr17 11906052 11906352 -73532128 + AluSq SINE Alu 2 300 -13 592 301 63 33 chr17 11906426 11906761 -73531719 - MARNA DNA Mariner -217 369 25 2221 115 0 13 chr17 11906993 11907306 -73531174 + AluSq SINE Alu 5 313 0 407 314 83 0 chr17 11907542 11907698 -73530782 + MIR SINE MIR 9 177 -85 189 0 0 0 chr17 11908023 11908044 -73530436 + (TG)n Simple_repeat Simple_repeat 1 21 0 253 269 103 21 chr17 11909094 11909239 -73529241 + L1ME4a LINE L1 5318 5474 -647 2284 78 14 0 chr17 11909240 11909533 -73528947 + AluY SINE Alu 1 297 -14 986 151 0 42 chr17 11909544 11909710 -73528770 + AluSg/x SINE Alu 137 295 -17 2074 124 6 22 chr17 11910179 11910494 -73527986 - AluSx SINE Alu 0 312 3 836 113 0 0 chr17 11910560 11910675 -73527805 - AluJb SINE Alu -197 115 1 533 251 60 95 chr17 11910915 11911285 -73527195 + L1ME4a LINE L1 5595 5951 -170 760 182 53 18 chr17 11913363 11913533 -73524947 - MER5B DNA MER1_type -2 176 1 2267 104 0 7 chr17 11913927 11914236 -73524244 + AluY SINE Alu 1 307 -4 2251 96 0 10 chr17 11915689 11915980 -73522500 + AluSx SINE Alu 16 303 -9 1190 102 0 0 chr17 11916506 11916663 -73521817 + AluSg/x SINE Alu 156 312 0 303 140 0 0 chr17 11916670 11916720 -73521760 + (TA)n Simple_repeat Simple_repeat 2 51 0 211 203 0 51 chr17 11919172 11919231 -73519249 - L2 LINE L2 0 3272 3217 1789 190 0 0 chr17 11920150 11920460 -73518020 + AluJb SINE Alu 1 310 -2 1574 68 16 0 chr17 11921518 11921710 -73516770 + AluY SINE Alu 98 292 -19 1067 208 28 0 chr17 11922084 11922300 -73516180 - MER58B DNA MER1_type -3 338 117 2429 97 0 0 chr17 11922792 11923100 -73515380 + AluSc SINE Alu 1 308 -1 303 28 0 0 chr17 11923521 11923557 -73514923 + (TTA)n Simple_repeat Simple_repeat 2 37 0 1227 112 0 6 chr17 11924069 11924230 -73514250 - AluSc SINE Alu -20 289 130 439 86 0 0 chr17 11924230 11924288 -73514192 - AluSg1 SINE Alu -216 93 36 245 289 72 30 chr17 11924316 11924482 -73513998 + L1M4 LINE L1 4640 4812 -1334 405 309 143 21 chr17 11924486 11925004 -73513476 - L1M4 LINE L1 -1891 4255 3675 321 281 79 9 chr17 11925000 11925114 -73513366 - L1MC/D LINE L1 -2303 5505 5384 * 476 259 16 32 chr17 11925139 11925328 -73513152 - L1MC/D LINE L1 -2361 5447 5262 2385 94 0 13 chr17 11925643 11925951 -73512529 + AluSq SINE Alu 1 304 -9 2373 97 0 3 chr17 11928293 11928602 -73509878 + AluSc SINE Alu 1 308 -1 453 145 0 0 chr17 11929509 11929585 -73508895 + (TTCTCC)n Simple_repeat Simple_repeat 4 79 0 343 304 102 31 chr17 11930311 11930715 -73507765 - MER41B LTR ERV1 -62 450 148 217 346 20 10 chr17 11930948 11931049 -73507431 + L2 LINE L2 2397 2498 -816 2505 57 6 19 chr17 11931090 11931405 -73507075 - AluY SINE Alu 0 311 1 2369 110 0 0 chr17 11931460 11931768 -73506712 - AluSx SINE Alu -4 308 1 2214 205 22 5 chr17 11931878 11932293 -73506187 - MSTA LTR MaLR -6 422 1 938 227 21 65 chr17 11932299 11932328 -73506152 + L2 LINE L2 2439 2468 -846 1960 98 0 0 chr17 11932328 11932574 -73505906 - AluSx SINE Alu -11 301 56 938 227 21 65 chr17 11932574 11932835 -73505645 + L2 LINE L2 2468 2716 -598 229 170 0 64 chr17 11932823 11932835 -73505645 + Alu SINE Alu 127 135 -167 2351 95 3 0 chr17 11932835 11933131 -73505349 + AluSq SINE Alu 1 297 -16 277 140 20 0 chr17 11933132 11933182 -73505298 + L2 LINE L2 3263 3313 0 182 236 55 18 chr17 11933563 11933618 -73504862 + L2 LINE L2 3216 3272 0 2060 126 0 3 chr17 11934093 11934416 -73504064 - AluSx SINE Alu 0 322 1 297 289 20 92 chr17 11935304 11935456 -73503024 - MLT1K LTR MaLR -8 580 440 287 302 184 11 chr17 11935474 11935653 -73502827 - MLT1K LTR MaLR -369 219 10 2683 134 16 19 chr17 11935771 11936204 -73502276 - MSTB1 LTR MaLR 0 432 1 874 142 123 0 chr17 11937584 11937739 -73500741 - MER5A DNA MER1_type 0 189 16 2647 187 71 4 chr17 11937958 11938482 -73499998 - MER89 LTR ERV1 0 559 1 2273 131 0 0 chr17 11938690 11939002 -73499478 + AluSx SINE Alu 1 312 0 357 369 23 11 chr17 11939747 11939923 -73498557 - MIR3 SINE MIR -16 192 15 22 0 0 0 chr17 11940982 11941004 -73497476 + AT_rich Low_complexity Low_complexity 1 22 0 426 305 35 7 chr17 11941523 11941664 -73496816 + MIR SINE MIR 42 186 -76 215 208 0 42 chr17 11941926 11941974 -73496506 - L2 LINE L2 -18 3254 3209 1468 292 44 8 chr17 11942087 11942626 -73495854 + L2 LINE L2 2482 3039 -274 843 263 178 2 chr17 11942627 11943042 -73495438 + HAL1 LINE L1 2020 2507 0 2640 43 0 0 chr17 11943878 11944178 -73494302 + AluY SINE Alu 1 300 -11 858 176 48 6 chr17 11944389 11944554 -73493926 - L1MA9 LINE L1 -38 6274 6103 * 1754 195 151 5 chr17 11944551 11944941 -73493539 + L1MA8 LINE L1 5489 5935 -356 1996 189 103 13 chr17 11945181 11945637 -73492843 + MLT1D LTR MaLR 3 499 -6 2747 131 72 84 chr17 11945853 11946516 -73491964 - MER4A LTR ERV1 -9 655 1 1958 166 34 53 chr17 11947024 11947581 -73490899 - MLT2A2 LTR ERVL 0 554 1 310 265 0 0 chr17 11947582 11947665 -73490815 + L1ME4a LINE L1 3896 3978 -2168 328 295 110 18 chr17 11947991 11948218 -73490262 + L1ME4a LINE L1 4370 4617 -1529 359 269 106 24 chr17 11948278 11948486 -73489994 + L1ME4a LINE L1 5735 5959 -162 198 0 0 0 chr17 11948486 11948508 -73489972 + (TG)n Simple_repeat Simple_repeat 2 23 0 * 264 59 0 0 chr17 11948507 11948541 -73489939 + (TA)n Simple_repeat Simple_repeat 1 34 0 2154 108 0 4 chr17 11949070 11949348 -73489132 - AluSg SINE Alu -33 277 1 752 83 8 75 chr17 11949355 11949488 -73488992 - L1PA13 LINE L1 -2 6161 6038 3381 120 21 53 chr17 11949490 11949647 -73488833 - L1PA13 LINE L1 -715 5459 5298 11177 20 3 1 chr17 11949647 11951695 -73486785 - L1PA3 LINE L1 0 6155 4106 3381 120 21 53 chr17 11951695 11952244 -73486236 - L1PA13 LINE L1 -876 5298 4770 443 301 24 43 chr17 11952356 11952565 -73485915 + LTR33 LTR ERVL 12 216 -305 273 304 9 0 chr17 11952859 11952971 -73485509 + L1P LINE L1 5293 5405 -763 23 0 0 0 chr17 11953046 11953069 -73485411 + AT_rich Low_complexity Low_complexity 1 23 0 231 183 37 24 chr17 11953146 11953228 -73485252 + (TTAA)n Simple_repeat Simple_repeat 1 83 0 349 316 63 15 chr17 11953228 11953434 -73485046 + L1ME LINE L1 5578 5793 -328 785 281 108 33 chr17 11953471 11953487 -73484993 + L2 LINE L2 2475 2488 -825 2531 58 0 0 chr17 11953487 11953779 -73484701 - AluY SINE Alu -19 292 1 785 281 108 33 chr17 11953779 11954532 -73483948 + L2 LINE L2 2488 3307 -6 541 296 80 75 chr17 11954557 11954946 -73483534 - L2 LINE L2 0 3313 2923 2166 116 3 10 chr17 11955010 11955311 -73483169 + AluSx SINE Alu 1 299 -13 313 358 142 21 chr17 11955473 11955732 -73482748 - L2 LINE L2 0 3313 3087 2006 124 3 24 chr17 11955732 11956060 -73482420 - AluSq SINE Alu 0 322 1 313 358 142 21 chr17 11956060 11956235 -73482245 - L2 LINE L2 -226 3087 2825 300 303 81 25 chr17 11956270 11956468 -73482012 + MLT1K LTR MaLR 377 585 -3 3057 187 75 67 chr17 11956925 11957458 -73481022 + MER54B LTR ERVL 3 546 -355 426 94 0 0 chr17 11957458 11957522 -73480958 + (TA)n Simple_repeat Simple_repeat 1 64 0 3057 187 75 67 chr17 11957522 11957882 -73480598 + MER54B LTR ERVL 546 901 0 186 317 17 0 chr17 11957981 11958041 -73480439 - MIR SINE MIR -61 147 87 380 286 71 7 chr17 11959158 11959298 -73479182 - Charlie8 DNA MER1_type -2268 149 1 3134 107 169 18 chr17 11959675 11959710 -73478770 - LTR24C LTR ERV1 0 635 607 920 118 0 15 chr17 11959710 11959845 -73478635 - FLAM_C SINE Alu 0 133 1 3134 107 169 18 chr17 11959845 11960361 -73478119 - LTR24C LTR ERV1 -28 607 1 473 365 40 0 chr17 11960432 11960654 -73477826 + MIR SINE MIR 6 236 -26 2146 112 0 23 chr17 11961061 11961365 -73477115 + AluY SINE Alu 1 297 -14 755 153 0 76 chr17 11961524 11961668 -73476812 - FLAM_C SINE Alu 0 133 1 2234 153 75 5 chr17 11962286 11962684 -73475796 + MSTA LTR MaLR 3 428 0 275 208 131 39 chr17 11962688 11962818 -73475662 + L1ME4a LINE L1 5980 6121 0 430 278 142 19 chr17 11962983 11963188 -73475292 + Charlie8 DNA MER1_type 36 265 -2152 351 134 0 175 chr17 11963401 11963446 -73475034 + MADE1 DNA Mariner 1 52 -28 2139 122 7 3 chr17 11963446 11963749 -73474731 + AluSq SINE Alu 1 304 -9 351 134 0 175 chr17 11963749 11963774 -73474706 + MADE1 DNA Mariner 52 52 -28 2268 116 3 0 chr17 11963774 11964076 -73474404 + AluSx SINE Alu 1 303 -9 351 134 0 175 chr17 11964076 11964101 -73474379 + MADE1 DNA Mariner 52 80 0 2737 135 29 0 chr17 11964172 11964586 -73473894 - MSTB LTR MaLR 0 426 1 225 203 32 114 chr17 11964594 11964717 -73473763 - HAL1b LINE L1 -490 858 746 423 298 18 75 chr17 11964995 11965197 -73473283 - HAL1 LINE L1 -780 1727 1556 2365 88 10 0 chr17 11965197 11965504 -73472976 - AluSp SINE Alu -3 310 1 423 298 18 75 chr17 11965504 11965687 -73472793 - HAL1 LINE L1 -951 1556 1364 * 45566 33 3 1 chr17 11965669 11971816 -73466664 - L1PA3 LINE L1 0 6155 2 790 269 84 44 chr17 11971841 11972391 -73466089 - HAL1 LINE L1 -1172 1335 764 257 320 50 10 chr17 11972785 11972885 -73465595 - HAL1 LINE L1 -2399 108 5 1676 266 79 19 chr17 11974412 11974930 -73463550 - MLT1H1 LTR MaLR 0 555 7 227 360 34 34 chr17 11975428 11975603 -73462877 + MIR3 SINE MIR 33 207 -1 193 318 12 0 chr17 11975905 11975990 -73462490 - MIR SINE MIR -36 226 141 2620 47 0 0 chr17 11977282 11977583 -73460897 + AluY SINE Alu 1 301 -10 732 201 14 0 chr17 11977912 11978051 -73460429 - Charlie4 DNA MER1_type -3 1958 1818 1464 193 42 3 chr17 11978245 11978556 -73459924 + L1MB5 LINE L1 5852 6174 0 2239 117 0 0 chr17 11978606 11978906 -73459574 + AluSx SINE Alu 1 300 -12 233 292 121 21 chr17 11980026 11980266 -73458214 - L3 LINE CR1 -37 1540 1277 217 313 0 0 chr17 11980688 11980752 -73457728 - MIR SINE MIR -110 152 89 1596 147 65 187 chr17 11980775 11980909 -73457571 + L1MB3 LINE L1 5680 5829 -354 973 122 45 0 chr17 11980909 11981065 -73457415 + L1MA2 LINE L1 6142 6304 0 1596 147 65 187 chr17 11981065 11981351 -73457129 + L1MB3 LINE L1 5829 6031 -152 2090 78 28 28 chr17 11981351 11981661 -73456819 - AluSg SINE Alu 0 310 1 1596 147 65 187 chr17 11981661 11981795 -73456685 + L1MB3 LINE L1 6031 6180 -3 21 36 0 0 chr17 11981795 11981823 -73456657 + AT_rich Low_complexity Low_complexity 1 28 0 2420 99 0 3 chr17 11981834 11982147 -73456333 + AluSq SINE Alu 1 312 -1 1837 102 8 4 chr17 11982433 11982677 -73455803 - AluSx SINE Alu -67 245 1 320 271 24 0 chr17 11982797 11982882 -73455598 + L2 LINE L2 3223 3309 -4 1712 152 7 52 chr17 11983171 11983184 -73455296 - AluJb SINE Alu 0 312 300 256 31 0 0 chr17 11983184 11983216 -73455264 + (TTTG)n Simple_repeat Simple_repeat 2 176 0 1712 152 7 52 chr17 11983216 11983511 -73454969 - AluJb SINE Alu -12 300 1 26 0 0 0 chr17 11983681 11983707 -73454773 + AT_rich Low_complexity Low_complexity 1 26 0 257 257 169 35 chr17 11984223 11984566 -73453914 + L1ME4a LINE L1 5716 6104 -17 510 275 88 6 chr17 11985494 11985665 -73452815 - MER91B DNA MER1_type -5 185 1 2184 112 3 16 chr17 11986270 11986573 -73451907 + AluSg SINE Alu 1 299 -11 1240 209 200 0 chr17 11986719 11987044 -73451436 - MLT1B LTR MaLR 0 390 1 971 279 91 17 chr17 11987170 11987579 -73450901 - L2 LINE L2 0 3313 2875 208 320 0 0 chr17 11989592 11989642 -73448838 - L2 LINE L2 -10 3262 3213 202 403 59 21 chr17 11989693 11989879 -73448601 - L2 LINE L2 0 3272 3080 470 260 59 35 chr17 11990092 11990346 -73448134 - L1MEd LINE L1 -5037 1082 823 2334 72 3 3 chr17 11990684 11991001 -73447479 + AluSq SINE Alu 1 313 0 309 68 0 0 chr17 11992366 11992410 -73446070 + (CA)n Simple_repeat Simple_repeat 1 44 0 2412 66 3 7 chr17 11992625 11992926 -73445554 - AluY SINE Alu -11 300 1 897 241 61 13 chr17 11993923 11994234 -73444246 + MER102a DNA MER1_type 5 330 0 230 266 31 0 chr17 11994290 11994354 -73444126 - L2 LINE L2 -2 3311 3246 1632 161 77 11 chr17 11995294 11995630 -73442850 - AluJo SINE Alu 0 355 1 2060 147 10 0 chr17 11996001 11996308 -73442172 - AluSx SINE Alu -2 310 1 560 250 31 0 chr17 11996774 11996902 -73441578 - MER117 DNA MER1_type -49 148 17 2167 117 0 10 chr17 11997199 11997497 -73440983 - AluSx SINE Alu -17 295 1 421 75 0 0 chr17 11997596 11997649 -73440831 - tRNA-Arg-CGC tRNA tRNA -23 53 1 3849 52 10 20 chr17 11998034 11998535 -73439945 + L1PA8 LINE L1 5677 6172 0 234 258 45 22 chr17 11999613 11999702 -73438778 - MIR SINE MIR -49 213 123 1711 184 66 8 chr17 12000115 12000495 -73437985 - L1MD1 LINE L1 0 6242 5841 276 291 7 68 chr17 12000499 12000647 -73437833 + MARNA DNA Mariner 45 183 -403 240 200 0 0 chr17 12000673 12000718 -73437762 - MER58A DNA MER1_type 0 224 180 937 196 58 27 chr17 12000720 12000944 -73437536 - MLT1B LTR MaLR -159 231 1 832 165 133 6 chr17 12000958 12001116 -73437364 - MER58A DNA MER1_type -46 178 1 1433 167 75 35 chr17 12001359 12001452 -73437028 - Charlie5 DNA MER1_type -1 2623 2535 1981 129 14 0 chr17 12001452 12001738 -73436742 + AluSq SINE Alu 1 290 -23 1433 167 75 35 chr17 12001738 12002015 -73436465 - Charlie5 DNA MER1_type -89 2535 2238 545 208 0 0 chr17 12002044 12002145 -73436335 - Charlie5 DNA MER1_type -2506 106 6 397 264 101 44 chr17 12002271 12002430 -73436050 + MIR SINE MIR 23 190 -72 1555 204 57 64 chr17 12002463 12002758 -73435722 - MLT1C LTR MaLR 0 467 175 2392 88 7 0 chr17 12002758 12003064 -73435416 - AluSc SINE Alu -1 308 1 1555 204 57 64 chr17 12003064 12003238 -73435242 - MLT1C LTR MaLR -292 175 1 209 149 43 0 chr17 12003524 12003571 -73434909 + (CTTTG)n Simple_repeat Simple_repeat 1 49 0 23 0 0 0 chr17 12003820 12003843 -73434637 + AT_rich Low_complexity Low_complexity 1 23 0 334 258 83 33 chr17 12004489 12004609 -73433871 - L2 LINE L2 -19 3253 3128 207 100 0 75 chr17 12005339 12005379 -73433101 + (TGAA)n Simple_repeat Simple_repeat 1 37 0 1553 202 91 33 chr17 12005545 12005941 -73432539 - LTR52 LTR ERVL 0 421 3 1390 111 16 74 chr17 12005971 12006057 -73432423 + MER30 DNA MER1_type 1 90 -140 2206 107 0 0 chr17 12006057 12006358 -73432122 + AluSx SINE Alu 1 301 0 1390 111 16 74 chr17 12006358 12006514 -73431966 + MER30 DNA MER1_type 90 230 0 189 237 79 13 chr17 12006940 12007016 -73431464 - L2 LINE L2 -769 2545 2465 2380 98 0 0 chr17 12007702 12008009 -73430471 + AluSg1 SINE Alu 1 307 -2 542 218 15 15 chr17 12008045 12008178 -73430302 + L1MB8 LINE L1 6040 6172 -6 2194 117 7 7 chr17 12008274 12008582 -73429898 + AluSx SINE Alu 3 310 -2 434 335 165 32 chr17 12008623 12008992 -73429488 - L2 LINE L2 -2369 945 626 2459 83 0 6 chr17 12008992 12009304 -73429176 + AluSg SINE Alu 1 310 0 434 335 165 32 chr17 12009304 12009523 -73428957 - L2 LINE L2 -2688 626 279 2306 92 0 7 chr17 12009595 12009899 -73428581 + AluSc SINE Alu 1 302 -7 280 302 23 0 chr17 12010154 12010240 -73428240 + MIR SINE MIR 41 128 -80 4002 89 30 27 chr17 12010772 12010988 -73427492 + L1PA11 LINE L1 5575 5789 -385 2376 108 0 0 chr17 12010988 12011295 -73427185 + AluSq SINE Alu 1 307 -6 4002 89 30 27 chr17 12011295 12011676 -73426804 + L1PA11 LINE L1 5789 6174 0 1911 100 38 14 chr17 12011719 12011832 -73426648 - MER4B LTR ERV1 -314 296 187 2125 103 35 0 chr17 12011832 12012114 -73426366 + AluSp SINE Alu 1 292 -21 1911 100 38 14 chr17 12012114 12012289 -73426191 - MER4B LTR ERV1 -423 187 1 293 269 0 0 chr17 12012641 12012708 -73425772 + MER74B LTR ERVL 1 67 -555 758 167 8 24 chr17 12012792 12012918 -73425562 + MER8 DNA MER2_type 116 239 0 534 184 0 0 chr17 12012950 12013048 -73425432 - L1MA5A LINE L1 -4 6293 6196 4111 133 74 1 chr17 12013048 12013697 -73424783 - LTR62 LTR ERVK -5 714 19 682 97 0 10 chr17 12013705 12013808 -73424672 - L1MA5A LINE L1 -94 6203 6102 1946 249 34 15 chr17 12013808 12014331 -73424149 + MER74B LTR ERVL 80 612 -10 6127 206 46 51 chr17 12014377 12014618 -73423862 - L1MB8 LINE L1 0 6178 5937 2472 65 3 0 chr17 12014618 12014911 -73423569 + AluY SINE Alu 1 294 -17 6127 206 46 51 chr17 12014911 12016666 -73421814 - L1MB8 LINE L1 -241 5937 4175 2046 92 4 8 chr17 12016666 12016928 -73421552 - AluSc SINE Alu -16 293 33 6127 206 46 51 chr17 12016928 12017529 -73420951 - L1MB8 LINE L1 -2003 4175 3595 2281 119 0 0 chr17 12017529 12017824 -73420656 + AluSx SINE Alu 1 295 -17 6127 206 46 51 chr17 12017824 12018049 -73420431 - L1MB8 LINE L1 -2583 3595 3370 2605 68 0 0 chr17 12018146 12018455 -73420025 + AluY SINE Alu 3 311 0 876 285 123 36 chr17 12018972 12019547 -73418933 - HAL1 LINE L1 -586 1921 1297 736 303 72 18 chr17 12019554 12019887 -73418593 + L2 LINE L2 2406 2756 -558 2152 108 7 0 chr17 12019887 12020209 -73418271 + AluSc SINE Alu 1 309 0 245 295 13 13 chr17 12021673 12021751 -73416729 + GA-rich Low_complexity Low_complexity 1 78 0 2425 89 0 9 chr17 12021785 12022100 -73416380 - AluSq SINE Alu -1 312 1 1768 161 7 4 chr17 12022849 12023174 -73415306 - AluJb SINE Alu 0 326 1 2273 95 3 7 chr17 12023347 12023641 -73414839 + AluSx SINE Alu 1 293 -19 2709 49 0 0 chr17 12023857 12024165 -73414315 + AluY SINE Alu 1 308 -3 2166 96 3 7 chr17 12024672 12024954 -73413526 - AluSp SINE Alu -7 306 26 2473 106 0 0 chr17 12024982 12025294 -73413186 + AluSx SINE Alu 1 312 0 2007 115 0 0 chr17 12025502 12025762 -73412718 + AluSq SINE Alu 1 260 -53 833 105 0 0 chr17 12025762 12025867 -73412613 + AluSg/x SINE Alu 157 261 -49 2178 77 0 15 chr17 12027696 12028011 -73410469 - AluSq SINE Alu 0 323 13 2013 73 0 0 chr17 12028011 12028254 -73410226 - AluYb8 SINE Alu -73 245 1 2503 88 0 0 chr17 12029260 12029567 -73408913 - AluSx SINE Alu -5 307 1 243 0 0 0 chr17 12030679 12030706 -73407774 + (A)n Simple_repeat Simple_repeat 1 27 0 319 241 135 15 chr17 12030743 12030876 -73407604 - MER103 DNA DNA -10 156 8 6909 76 9 3 chr17 12030885 12032219 -73406261 - L1PA11 LINE L1 0 6174 4834 468 51 0 0 chr17 12032735 12032794 -73405686 + (TTTA)n Simple_repeat Simple_repeat 2 60 0 883 134 0 0 chr17 12032795 12032914 -73405566 - AluSq/x SINE Alu -194 119 1 376 280 11 0 chr17 12033499 12033592 -73404888 - MER5A DNA MER1_type -85 104 11 2635 62 0 0 chr17 12033668 12033977 -73404503 - AluY SINE Alu -2 309 1 972 176 6 0 chr17 12033986 12034162 -73404318 + MER5A DNA MER1_type 8 184 -5 470 120 60 40 chr17 12034297 12034397 -73404083 + L1MB3 LINE L1 6080 6181 -2 484 104 0 0 chr17 12035215 12035282 -73403198 + MER5A DNA MER1_type 9 75 -114 1191 70 0 0 chr17 12035283 12035426 -73403054 + AluY SINE Alu 157 299 -12 466 152 181 0 chr17 12035427 12035532 -73402948 + MER5A DNA MER1_type 66 189 0 237 281 56 11 chr17 12035750 12035839 -73402641 - MLT1E LTR MaLR -500 93 1 198 253 58 23 chr17 12036917 12037004 -73401476 + MER5A DNA MER1_type 97 186 -3 * 524 151 0 0 chr17 12036928 12037014 -73401466 - MER5A DNA MER1_type -96 93 8 398 237 11 0 chr17 12037088 12037181 -73401299 + MER5A DNA MER1_type 11 104 -85 2546 72 3 0 chr17 12038018 12038323 -73400157 - AluSp SINE Alu -7 306 1 2595 38 0 22 chr17 12039079 12039395 -73399085 - AluY SINE Alu -2 309 1 2207 97 13 7 chr17 12039605 12039905 -73398575 - AluSx SINE Alu -10 302 1 2575 63 0 0 chr17 12040017 12040317 -73398163 - AluSg SINE Alu -10 300 1 1414 193 7 48 chr17 12040991 12041286 -73397194 + AluJb SINE Alu 1 283 -29 198 0 0 0 chr17 12041295 12041317 -73397163 + (TAAAA)n Simple_repeat Simple_repeat 4 25 0 2292 73 10 3 chr17 12042836 12043124 -73395356 + AluSg SINE Alu 16 305 -5 1760 181 0 23 chr17 12043233 12043542 -73394938 - AluJo SINE Alu -10 302 1 717 97 35 14 chr17 12044451 12044595 -73393885 + (TGGA)n Simple_repeat Simple_repeat 4 150 0 21 0 0 0 chr17 12045109 12045130 -73393350 + AT_rich Low_complexity Low_complexity 1 21 0 215 259 141 12 chr17 12045452 12045537 -73392943 - MIR SINE MIR -123 139 44 217 143 0 24 chr17 12045956 12045998 -73392482 + (TCCC)n Simple_repeat Simple_repeat 1 41 0 619 38 19 38 chr17 12046338 12046444 -73392036 + (TAGA)n Simple_repeat Simple_repeat 3 106 0 206 255 10 20 chr17 12046445 12046543 -73391937 + (TA)n Simple_repeat Simple_repeat 1 97 0 2560 66 3 0 chr17 12047533 12047837 -73390643 - AluY SINE Alu -6 305 1 2371 83 3 0 chr17 12048040 12048342 -73390138 + AluY SINE Alu 1 303 -8 244 235 98 39 chr17 12049391 12049493 -73388987 + MER5A DNA MER1_type 80 187 -2 2107 124 0 3 chr17 12049899 12050197 -73388283 + AluSx SINE Alu 2 298 -14 1004 238 0 0 chr17 12050218 12050420 -73388060 + L1PB4 LINE L1 5927 6128 -28 1156 53 0 0 chr17 12050420 12050552 -73387928 + AluY SINE Alu 1 132 -179 2271 104 0 7 chr17 12050559 12050866 -73387614 + AluSx SINE Alu 1 305 -7 2366 96 0 3 chr17 12051025 12051337 -73387143 + AluY SINE Alu 1 311 0 1059 169 86 25 chr17 12052051 12052329 -73386151 + MER33 DNA MER1_type 7 301 -23 2196 82 58 7 chr17 12052416 12052708 -73385772 - AluSg SINE Alu -3 307 1 2382 85 3 3 chr17 12052868 12053173 -73385307 - AluSx SINE Alu -7 305 1 2212 114 10 0 chr17 12054125 12054422 -73384058 - AluSp SINE Alu -13 300 1 1753 161 6 22 chr17 12054699 12055021 -73383459 - L1MC1 LINE L1 0 6333 6017 260 242 16 0 chr17 12055039 12055101 -73383379 - AluSp/q SINE Alu -7 296 234 1161 155 24 24 chr17 12055103 12055309 -73383171 - AluJo SINE Alu -106 206 1 1097 146 0 0 chr17 12056042 12056193 -73382287 + AluSq/x SINE Alu 1 151 -162 440 172 0 35 chr17 12056196 12056283 -73382197 + FLAM_A SINE Alu 50 133 -9 2227 121 0 0 chr17 12056286 12056583 -73381897 + AluSg SINE Alu 1 297 -13 498 233 121 0 chr17 12056585 12056701 -73381779 - MER3 DNA MER1_type -71 138 9 1576 176 6 60 chr17 12056783 12057102 -73381378 - AluJo SINE Alu -10 302 1 448 143 26 0 chr17 12057102 12057179 -73381301 + MER3 DNA MER1_type 125 203 -6 302 222 0 0 chr17 12057142 12057196 -73381284 - MER3 DNA MER1_type -119 90 37 * 1350 187 16 89 chr17 12057438 12057834 -73380646 - MLT1A2 LTR MaLR 0 390 4 1722 61 223 4 chr17 12058173 12058420 -73380060 + AluY SINE Alu 1 301 -10 1020 233 75 19 chr17 12058424 12058797 -73379683 + L1MEc LINE L1 1195 1588 -5133 1140 267 35 41 chr17 12058812 12059322 -73379158 + L1MEc LINE L1 1535 2041 -4680 748 143 0 8 chr17 12059323 12059442 -73379038 + AluSg/x SINE Alu 191 308 -1 1161 243 53 9 chr17 12059442 12059779 -73378701 + L1MEc LINE L1 2042 2393 -4328 1063 203 18 57 chr17 12059781 12060008 -73378472 + MER58A DNA MER1_type 7 224 0 2005 251 54 30 chr17 12060055 12060160 -73378320 + L1MEc LINE L1 2521 2622 -3918 1711 238 50 53 chr17 12060160 12060724 -73377756 - MER68 LTR ERV1 0 562 1 2005 251 54 30 chr17 12060724 12061362 -73377118 + L1MEc LINE L1 2622 3282 -3258 1618 249 60 14 chr17 12061371 12062006 -73376474 + L1MEc LINE L1 3330 3993 -2547 * 1690 206 16 39 chr17 12062000 12062388 -73376092 + L1MEc LINE L1 20 398 -6142 1171 163 0 0 chr17 12062388 12062584 -73375896 + L1MD1 LINE L1 6042 6237 -5 2143 146 40 22 chr17 12062593 12062998 -73375482 + L1MC1 LINE L1 5673 6084 -249 242 184 0 20 chr17 12063013 12063062 -73375418 + L1MC2 LINE L1 6041 6088 -256 1692 135 10 24 chr17 12063117 12063405 -73375075 + L1MC1 LINE L1 6050 6333 0 1197 295 77 14 chr17 12063411 12063920 -73374560 + L1MEc LINE L1 4008 4548 -1992 301 288 16 40 chr17 12064351 12064476 -73374004 - MER117 DNA MER1_type -75 122 1 2534 87 0 0 chr17 12064797 12065106 -73373374 + AluSx SINE Alu 1 309 -3 2095 116 3 20 chr17 12065115 12065417 -73373063 + AluSx SINE Alu 1 297 -15 2399 96 0 0 chr17 12065676 12065978 -73372502 + AluSx SINE Alu 1 302 -10 703 235 149 5 chr17 12067088 12067309 -73371171 + MIR SINE MIR 2 254 -8 688 67 11 0 chr17 12067340 12067430 -73371050 - AluSg/x SINE Alu -45 267 177 684 167 127 0 chr17 12067639 12067789 -73370691 + MLT1C LTR MaLR 8 176 -291 2493 74 3 0 chr17 12067796 12068094 -73370386 + AluSp SINE Alu 1 299 -14 1012 146 52 38 chr17 12068110 12068323 -73370157 + L1PA16 LINE L1 5951 6166 0 1315 197 42 8 chr17 12068507 12068766 -73369714 + MLT1C LTR MaLR 200 467 0 6993 211 58 57 chr17 12069156 12071051 -73367429 + L1M4 LINE L1 5 1897 -4747 192 40 0 0 chr17 12071051 12071076 -73367404 + (GA)n Simple_repeat Simple_repeat 2 26 0 6993 211 58 57 chr17 12071076 12071422 -73367058 + L1M4 LINE L1 1897 2241 -4403 1931 116 94 0 chr17 12071422 12071698 -73366782 + AluSx SINE Alu 1 302 -10 6993 211 58 57 chr17 12071698 12071744 -73366736 + L1M4 LINE L1 2241 2285 -4359 1785 173 3 10 chr17 12071744 12072050 -73366430 - AluJo SINE Alu -8 304 1 6993 211 58 57 chr17 12072050 12072686 -73365794 + L1M4 LINE L1 2285 3050 -3594 795 211 0 0 chr17 12072698 12072840 -73365640 + L1MB7 LINE L1 6009 6150 -34 539 214 84 26 chr17 12073161 12073315 -73365165 + MER103 DNA DNA 2 164 -2 257 326 74 0 chr17 12073562 12073657 -73364823 + L2 LINE L2 3171 3272 0 222 215 31 15 chr17 12074562 12074627 -73363853 + MER5A DNA MER1_type 123 188 -1 800 263 5 10 chr17 12074636 12074834 -73363646 - MER58A DNA MER1_type 0 224 28 2318 98 0 0 chr17 12075029 12075325 -73363155 - AluSx SINE Alu -16 296 1 613 158 267 7 chr17 12075539 12075685 -73362795 - MER5A DNA MER1_type 0 189 6 2287 90 10 26 chr17 12076023 12076334 -73362146 + AluSc SINE Alu 1 306 -3 2700 90 58 21 chr17 12076399 12076831 -73361649 + LTR7 LTR ERV1 1 448 -2 16412 97 27 24 chr17 12076833 12079935 -73358545 + HERVH LTR ERV1 1 2987 -4726 878 129 20 7 chr17 12079929 12080076 -73358404 + HERVH LTR ERV1 3140 3288 -4425 * 974 142 0 7 chr17 12080068 12080216 -73358264 + HERVH LTR ERV1 3492 3638 -4075 * 1247 147 0 1 chr17 12080206 12080567 -73357913 + HERVH LTR ERV1 4744 5149 -2564 2634 92 50 35 chr17 12080568 12081157 -73357323 + HERVH LTR ERV1 5600 7713 0 2645 95 58 21 chr17 12081157 12081589 -73356891 + LTR7 LTR ERV1 1 448 -2 258 32 0 0 chr17 12083479 12083510 -73354970 + (T)n Simple_repeat Simple_repeat 1 31 0 452 234 78 52 chr17 12083734 12083965 -73354515 - L1ME4a LINE L1 -1 6120 5884 216 0 0 0 chr17 12084424 12084448 -73354032 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 695 288 97 59 chr17 12084480 12085018 -73353462 - L1ME4a LINE L1 -263 5858 5304 2198 88 14 7 chr17 12085073 12085357 -73353123 - AluSx SINE Alu -21 291 6 299 249 46 86 chr17 12085397 12085594 -73352886 - L1ME4a LINE L1 -1318 4828 4640 1409 85 5 35 chr17 12085962 12086161 -73352319 - AluSq SINE Alu -12 301 109 450 209 0 0 chr17 12086352 12086438 -73352042 + L1MC1 LINE L1 6248 6333 0 658 203 114 46 chr17 12086471 12086506 -73351974 + MER112 DNA MER1_type 8 39 -221 1136 183 72 113 chr17 12086506 12086894 -73351586 + MLT1A2 LTR MaLR 3 374 0 658 203 114 46 chr17 12086894 12087095 -73351385 + MER112 DNA MER1_type 39 260 0 378 0 0 0 chr17 12087301 12087343 -73351137 + (TG)n Simple_repeat Simple_repeat 2 43 0 480 290 107 18 chr17 12088350 12088574 -73349906 + MIR SINE MIR 3 246 -16 2115 102 20 16 chr17 12089145 12089450 -73349030 - AluSc SINE Alu -3 306 1 207 0 0 0 chr17 12089462 12089485 -73348995 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 585 280 86 11 chr17 12089950 12090136 -73348344 + MIR SINE MIR 4 203 -59 362 278 23 53 chr17 12090237 12090370 -73348110 + L2 LINE L2 3169 3297 -16 2313 124 33 28 chr17 12090615 12090977 -73347503 + THE1B LTR MaLR 1 364 0 27 0 0 0 chr17 12091206 12091233 -73347247 + AT_rich Low_complexity Low_complexity 1 27 0 2168 185 92 184 chr17 12092777 12093475 -73345005 + L1MEc LINE L1 35 656 -5740 1060 157 42 60 chr17 12093475 12093520 -73344960 + AluJo SINE Alu 92 136 -176 2309 107 0 0 chr17 12093520 12093819 -73344661 + AluSx SINE Alu 1 299 -13 1060 157 42 60 chr17 12093819 12093989 -73344491 + AluJo SINE Alu 136 303 -9 2168 185 92 184 chr17 12093989 12094476 -73344004 + L1MEc LINE L1 656 1186 -5210 789 209 63 106 chr17 12094462 12094853 -73343627 + L1MEc LINE L1 1058 1383 -4832 * 394 264 42 16 chr17 12094897 12095065 -73343415 + L1ME2 LINE L1 5860 6035 -142 2456 254 65 45 chr17 12096215 12097002 -73341478 + MER21B LTR ERV1 1 803 -60 2525 61 0 13 chr17 12098182 12098493 -73339987 + AluY SINE Alu 1 307 -4 1666 163 101 88 chr17 12098999 12099203 -73339277 - Tigger2a DNA MER2_type -2274 434 234 2522 66 0 0 chr17 12099203 12099505 -73338975 + AluY SINE Alu 1 302 -9 1666 163 101 88 chr17 12099505 12099698 -73338782 - Tigger2a DNA MER2_type -2474 234 32 1729 123 0 20 chr17 12099772 12100023 -73338457 + AluSq SINE Alu 3 248 -65 2199 114 0 0 chr17 12100044 12100343 -73338137 + AluSx SINE Alu 1 299 -13 519 203 178 6 chr17 12100346 12100509 -73337971 + L1MEc LINE L1 2660 2850 -3365 651 197 107 26 chr17 12100662 12100896 -73337584 + L1MEc LINE L1 2850 3102 -3113 22 0 0 0 chr17 12100898 12100920 -73337560 + AT_rich Low_complexity Low_complexity 1 22 0 24 53 0 0 chr17 12101168 12101206 -73337274 + AT_rich Low_complexity Low_complexity 1 38 0 208 271 94 24 chr17 12101371 12101456 -73337024 - MIR SINE MIR -4 258 168 247 171 92 26 chr17 12101549 12101625 -73336855 + MER20B DNA MER1_type 43 123 -660 234 222 0 0 chr17 12102361 12102406 -73336074 - L2 LINE L2 -19 3294 3250 203 0 37 0 chr17 12102688 12102715 -73335765 + (TC)n Simple_repeat Simple_repeat 1 28 0 31 0 0 0 chr17 12103069 12103100 -73335380 + AT_rich Low_complexity Low_complexity 1 31 0 354 182 0 69 chr17 12103107 12103266 -73335214 + (CATGT)n Simple_repeat Simple_repeat 3 150 0 278 346 85 11 chr17 12103275 12103463 -73335017 + L3 LINE CR1 1184 1385 -192 180 0 0 0 chr17 12103466 12103486 -73334994 + (T)n Simple_repeat Simple_repeat 1 20 0 1047 98 0 0 chr17 12103486 12103619 -73334861 - AluSq/x SINE Alu -179 133 1 808 300 102 20 chr17 12104223 12104566 -73333914 - L2 LINE L2 0 3313 2943 1841 158 28 0 chr17 12104569 12104860 -73333620 - AluSx SINE Alu -9 303 5 1445 227 159 34 chr17 12104886 12105071 -73333409 - L2 LINE L2 -1139 2175 2014 1685 143 14 38 chr17 12105071 12105358 -73333122 + AluSp SINE Alu 2 281 -32 231 36 0 0 chr17 12105358 12105386 -73333094 + (GAAA)n Simple_repeat Simple_repeat 4 31 0 1445 227 159 34 chr17 12105386 12105728 -73332752 - L2 LINE L2 -1299 2015 1581 1695 126 38 31 chr17 12105874 12105991 -73332489 + L1MA7 LINE L1 5997 6112 -179 2283 82 0 0 chr17 12105991 12106304 -73332176 + AluY SINE Alu 1 313 0 1695 126 38 31 chr17 12106304 12106478 -73332002 + L1MA7 LINE L1 6112 6291 0 210 263 18 0 chr17 12106657 12106714 -73331766 + GA-rich Low_complexity Low_complexity 1 58 0 2196 117 7 3 chr17 12106762 12107070 -73331410 + AluSc SINE Alu 1 309 0 212 356 34 39 chr17 12107135 12107289 -73331191 - MIR SINE MIR -63 145 3 2035 95 56 7 chr17 12107817 12108101 -73330379 + AluSg SINE Alu 1 298 -12 1208 257 39 81 chr17 12108442 12108594 -73329886 + Charlie7 DNA MER1_type 116 273 -2339 2420 75 0 7 chr17 12108594 12108889 -73329591 + AluSg SINE Alu 1 293 -17 1208 257 39 81 chr17 12108889 12109249 -73329231 + Charlie7 DNA MER1_type 273 604 -2008 2378 100 3 0 chr17 12109249 12109559 -73328921 + AluSp SINE Alu 1 311 -2 1208 257 39 81 chr17 12109559 12109614 -73328866 + Charlie7 DNA MER1_type 604 660 -1952 22 56 0 0 chr17 12109639 12109675 -73328805 + AT_rich Low_complexity Low_complexity 1 36 0 237 236 30 6 chr17 12109700 12109865 -73328615 + (TA)n Simple_repeat Simple_repeat 2 170 0 348 180 180 62 chr17 12109865 12109993 -73328487 + Charlie7 DNA MER1_type 733 875 -1737 * 1656 220 113 32 chr17 12109989 12110589 -73327891 + Charlie7 DNA MER1_type 1956 2604 -8 355 283 72 26 chr17 12110613 12110765 -73327715 - MER5A DNA MER1_type -6 183 25 530 265 0 15 chr17 12111005 12111137 -73327343 + MIR SINE MIR 107 236 -26 817 213 73 0 chr17 12111244 12111394 -73327086 + AluJb SINE Alu 133 293 -19 228 67 0 0 chr17 12111669 12111699 -73326781 + (TTTTG)n Simple_repeat Simple_repeat 3 32 0 239 176 235 29 chr17 12112875 12112943 -73325537 + Charlie8 DNA MER1_type 1 82 -2335 733 171 0 8 chr17 12112997 12113142 -73325338 - FLAM_A SINE Alu 0 144 1 2412 106 0 0 chr17 12114085 12114396 -73324084 - AluSx SINE Alu -1 311 1 2329 78 0 7 chr17 12115063 12115359 -73323121 - AluSc SINE Alu -15 294 1 2196 123 0 3 chr17 12116026 12116327 -73322153 - AluSc SINE Alu -9 300 1 2401 99 0 0 chr17 12116339 12116641 -73321839 - AluSg SINE Alu -7 303 2 1531 255 144 15 chr17 12116726 12117329 -73321151 - L1MC4a LINE L1 -1712 6096 5416 880 242 11 6 chr17 12117330 12117508 -73320972 - AluJb SINE Alu -22 290 112 407 290 28 46 chr17 12117508 12117599 -73320881 - L1MC4a LINE L1 -777 5369 5278 2297 99 0 0 chr17 12117599 12117893 -73320587 - AluSc SINE Alu -15 294 1 407 290 28 46 chr17 12117893 12118018 -73320462 - L1MC4a LINE L1 -868 5278 5157 3912 158 16 40 chr17 12118747 12119412 -73319068 + L1MB7 LINE L1 5457 6105 -79 2414 68 7 0 chr17 12119412 12119708 -73318772 + AluY SINE Alu 1 298 -13 3912 158 16 40 chr17 12119708 12119774 -73318706 + L1MB7 LINE L1 6105 6171 -13 243 185 19 0 chr17 12119774 12119828 -73318652 + MER113 DNA MER1_type? 210 264 -257 263 216 118 108 chr17 12120197 12120401 -73318079 - L1MC4 LINE L1 -1 8041 7836 2059 139 0 7 chr17 12120439 12120734 -73317746 - AluSx SINE Alu -19 293 1 681 244 13 0 chr17 12120759 12120915 -73317565 - L1ME2 LINE L1 -10 6154 5997 2097 132 0 0 chr17 12120977 12121273 -73317207 - AluSx SINE Alu -16 296 1 271 241 25 0 chr17 12121458 12121537 -73316943 - L1ME2 LINE L1 -383 5738 5658 1940 147 3 3 chr17 12121558 12121851 -73316629 + AluSx SINE Alu 1 293 -19 2323 94 3 0 chr17 12122239 12122536 -73315944 + AluSp SINE Alu 1 298 -15 1822 123 168 26 chr17 12122933 12123273 -73315207 - MLT1B LTR MaLR 0 390 3 195 114 0 0 chr17 12123572 12123607 -73314873 + (TA)n Simple_repeat Simple_repeat 2 36 0 2085 97 3 40 chr17 12123607 12123907 -73314573 - AluSx SINE Alu -23 289 1 387 0 0 0 chr17 12123938 12123981 -73314499 + (TG)n Simple_repeat Simple_repeat 2 44 0 226 273 246 0 chr17 12124869 12124979 -73313501 - MER5A DNA MER1_type -3 186 50 406 272 111 112 chr17 12125283 12126205 -73312275 + L1M2 LINE L1 530 1374 -5475 201 74 0 0 chr17 12126375 12126402 -73312078 + (A)n Simple_repeat Simple_repeat 1 27 0 294 280 13 0 chr17 12127526 12127601 -73310879 - L2 LINE L2 -301 2971 2896 194 263 70 18 chr17 12128229 12128286 -73310194 - L2 LINE L2 -5 3267 3208 449 290 161 18 chr17 12128360 12128584 -73309896 + MIR SINE MIR 7 262 0 481 276 39 54 chr17 12129789 12129992 -73308488 + MIR SINE MIR 17 216 -46 203 182 91 45 chr17 12131145 12131211 -73307269 - MIR SINE MIR -67 195 127 435 266 84 0 chr17 12132644 12132787 -73305693 - MIR SINE MIR -36 226 72 226 221 325 0 chr17 12133576 12133653 -73304827 - MIR SINE MIR -68 140 39 21 89 0 0 chr17 12133972 12134028 -73304452 + AT_rich Low_complexity Low_complexity 1 56 0 1449 143 129 49 chr17 12134300 12134586 -73303894 + AluJo SINE Alu 1 309 -3 22 0 0 0 chr17 12135251 12135273 -73303207 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr17 12136638 12136666 -73301814 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr17 12137082 12137103 -73301377 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr17 12137347 12137375 -73301105 + AT_rich Low_complexity Low_complexity 1 28 0 1882 163 14 0 chr17 12137490 12137779 -73300701 - AluJo SINE Alu -19 293 1 1346 182 14 5 chr17 12138511 12138731 -73299749 - AluJo SINE Alu -90 222 1 222 336 84 8 chr17 12139188 12139307 -73299173 - L2 LINE L2 -4 3309 3182 2238 98 7 0 chr17 12139879 12140176 -73298304 + AluSp SINE Alu 1 299 -14 23 0 0 0 chr17 12140188 12140211 -73298269 + AT_rich Low_complexity Low_complexity 1 23 0 820 208 71 0 chr17 12143299 12143467 -73295013 - MIR SINE MIR -21 241 62 1295 230 88 41 chr17 12144030 12144669 -73293811 - L1MC5 LINE L1 -37 7924 7256 2260 96 48 0 chr17 12146542 12146834 -73291646 + AluSq SINE Alu 1 306 -7 1319 146 28 5 chr17 12147093 12147305 -73291175 + AluJb SINE Alu 87 303 -9 2527 51 0 0 chr17 12147409 12147703 -73290777 + AluY SINE Alu 1 294 -17 2162 187 49 130 chr17 12147997 12148806 -73289674 - MER21B LTR ERV1 -107 756 13 1482 143 47 53 chr17 12149186 12149508 -73288972 - MER21A LTR ERV1 -6 925 606 866 158 55 18 chr17 12149505 12149670 -73288810 - MER21B LTR ERV1 -692 171 1 * 1017 128 45 0 chr17 12152131 12152287 -73286193 - AluSq SINE Alu -17 296 134 1939 151 10 16 chr17 12152290 12152602 -73285878 - AluSq SINE Alu -3 310 1 2501 61 15 6 chr17 12153353 12153682 -73284798 + L1PA8 LINE L1 5841 6172 0 198 0 0 0 chr17 12153682 12153704 -73284776 + (GA)n Simple_repeat Simple_repeat 1 22 0 545 281 6 18 chr17 12154466 12154633 -73283847 - FRAM SINE Alu 0 166 2 290 252 32 16 chr17 12155616 12155739 -73282741 - MER113 DNA MER1_type? -393 128 4 436 285 136 24 chr17 12156276 12156658 -73281822 - L1ME4a LINE L1 -83 6038 5614 695 275 96 43 chr17 12156664 12156721 -73281759 - LTR16A LTR ERVL -7 443 390 2326 104 0 13 chr17 12156721 12157029 -73281451 + AluSx SINE Alu 1 304 -8 695 275 96 43 chr17 12157029 12157332 -73281148 - LTR16A LTR ERVL -60 390 79 3634 251 207 25 chr17 12157683 12159230 -73279250 + L2 LINE L2 1207 3056 -257 513 325 108 7 chr17 12159463 12159758 -73278722 + LTR16C LTR ERVL 167 491 0 454 294 23 34 chr17 12159857 12160034 -73278446 + L2 LINE L2 3132 3306 -7 366 248 79 0 chr17 12160090 12160191 -73278289 + MIR SINE MIR 37 145 -117 198 71 0 0 chr17 12161169 12161197 -73277283 + (CA)n Simple_repeat Simple_repeat 1 28 0 21 71 0 0 chr17 12161570 12161612 -73276868 + AT_rich Low_complexity Low_complexity 1 42 0 631 144 10 0 chr17 12161863 12161967 -73276513 + MER2 DNA MER2_type 1 105 -240 1464 172 38 91 chr17 12161974 12162180 -73276300 + THE1C LTR MaLR 1 216 -159 3430 98 226 2 chr17 12162180 12162742 -73275738 - LTR12 LTR ERV1 0 688 1 1464 172 38 91 chr17 12162742 12162860 -73275620 + THE1C LTR MaLR 216 304 -71 2270 81 0 7 chr17 12162860 12163194 -73275286 - AluY SINE Alu 0 333 2 1464 172 38 91 chr17 12163194 12163263 -73275217 + THE1C LTR MaLR 304 375 0 534 212 157 30 chr17 12163264 12163462 -73275018 + MER2 DNA MER2_type 123 345 0 213 185 0 154 chr17 12163523 12163588 -73274892 - MIR SINE MIR -122 140 86 311 301 77 42 chr17 12163716 12163859 -73274621 + L2 LINE L2 3124 3271 -1 4057 127 11 19 chr17 12163928 12164431 -73274049 + MER41B LTR ERV1 1 499 -136 2420 69 6 31 chr17 12164431 12164750 -73273730 - AluY SINE Alu 0 311 1 4057 127 11 19 chr17 12164750 12164886 -73273594 + MER41B LTR ERV1 499 635 0 502 274 54 54 chr17 12165178 12165437 -73273043 + L1M4 LINE L1 2995 3253 -2893 3854 151 41 76 chr17 12165504 12165850 -73272630 - MER4D LTR ERV1 0 866 509 2576 30 7 3 chr17 12165850 12166153 -73272327 + AluY SINE Alu 1 304 -7 3854 151 41 76 chr17 12166153 12166746 -73271734 - MER4D LTR ERV1 -357 509 1 1065 285 94 24 chr17 12166747 12167532 -73270948 + L1M4 LINE L1 3487 4332 -1814 240 214 0 0 chr17 12167532 12167574 -73270906 - L2 LINE L2 -12 3260 3219 342 319 14 28 chr17 12167669 12167810 -73270670 - L2 LINE L2 -202 3070 2932 190 222 0 0 chr17 12167888 12167924 -73270556 + L2 LINE L2 3274 3309 -4 722 176 0 0 chr17 12168065 12168196 -73270284 + MLT2B1 LTR ERVL 1 131 -389 805 216 9 105 chr17 12168244 12168329 -73270151 + L1ME3A LINE L1 5853 5945 -225 2559 59 0 0 chr17 12168329 12168632 -73269848 + AluY SINE Alu 1 303 -8 805 216 9 105 chr17 12168632 12168824 -73269656 + L1ME3A LINE L1 5945 6097 -73 3120 130 16 6 chr17 12168824 12169330 -73269150 - MER75 DNA T2_type -3 511 1 805 216 9 105 chr17 12169330 12169375 -73269105 + L1ME3A LINE L1 6097 6145 -25 2559 138 41 10 chr17 12169375 12169576 -73268904 + MER61B LTR ERV1 1 194 -231 303 28 0 0 chr17 12169576 12169612 -73268868 + (GCCTG)n Simple_repeat Simple_repeat 1 36 0 2559 138 41 10 chr17 12169612 12169822 -73268658 + MER61B LTR ERV1 194 425 0 219 57 0 75 chr17 12170441 12170494 -73267986 + (CCCCCT)n Simple_repeat Simple_repeat 1 49 0 243 125 0 0 chr17 12170502 12170542 -73267938 + (TC)n Simple_repeat Simple_repeat 1 40 0 414 268 75 85 chr17 12170649 12171086 -73267394 - L1MEd LINE L1 -5125 994 562 361 354 85 60 chr17 12171144 12171624 -73266856 - L1MEd LINE L1 -5617 502 11 544 301 24 5 chr17 12172028 12172382 -73266098 + L1 LINE L1 2127 2485 -3661 24 0 0 0 chr17 12172479 12172503 -73265977 + AT_rich Low_complexity Low_complexity 1 24 0 284 327 31 28 chr17 12172568 12172895 -73265585 + L1 LINE L1 2701 3028 -3118 23 33 0 0 chr17 12173360 12173390 -73265090 + AT_rich Low_complexity Low_complexity 1 30 0 358 308 93 6 chr17 12173392 12173564 -73264916 + L1 LINE L1 3681 3867 -2279 7956 128 16 10 chr17 12173677 12174971 -73263509 + HSMAR2 DNA Mariner 2 1302 0 914 185 0 0 chr17 12175670 12175827 -73262653 + Tigger7 DNA MER2_type 235 391 -2096 2257 92 0 0 chr17 12175828 12176160 -73262320 + AluSx SINE Alu 1 332 0 373 238 0 0 chr17 12176200 12176280 -73262200 + Tigger7 DNA MER2_type 2411 2490 -1 198 316 150 28 chr17 12176280 12176533 -73261947 + L2 LINE L2 2391 2674 -640 219 139 0 0 chr17 12176590 12176626 -73261854 + (CA)n Simple_repeat Simple_repeat 2 37 0 1306 156 90 11 chr17 12176634 12176963 -73261517 - Tigger4(Zombi) DNA MER2_type 0 2731 1 298 343 130 4 chr17 12176990 12177244 -73261236 - L2 LINE L2 -11 3302 3017 1846 128 6 56 chr17 12178113 12178432 -73260048 + AluSx SINE Alu 1 303 -9 21 71 0 0 chr17 12178722 12178764 -73259716 + AT_rich Low_complexity Low_complexity 1 42 0 559 133 40 77 chr17 12178864 12179027 -73259453 + L1MB8 LINE L1 6030 6183 -1 * 1157 183 50 27 chr17 12179012 12179313 -73259167 - L1MA9 LINE L1 -7 6305 5998 1843 161 0 16 chr17 12179650 12180009 -73258471 + AluJo SINE Alu 1 354 0 300 53 0 0 chr17 12180081 12180119 -73258361 + (TG)n Simple_repeat Simple_repeat 2 39 0 543 183 29 10 chr17 12181806 12181910 -73256570 + MER81 DNA DNA 1 106 -8 231 286 0 23 chr17 12181898 12181985 -73256495 + MLT1I LTR MaLR 81 146 -263 * 411 228 0 0 chr17 12182187 12182279 -73256201 + MLT1H LTR MaLR 458 549 0 1766 148 184 11 chr17 12182376 12182554 -73255926 + MSTA LTR MaLR 2 148 -280 525 16 0 0 chr17 12182554 12182616 -73255864 + (TC)n Simple_repeat Simple_repeat 1 62 0 1766 148 184 11 chr17 12182616 12182801 -73255679 + MSTA LTR MaLR 148 428 0 4873 134 9 31 chr17 12182989 12183208 -73255272 - MER54B LTR ERVL -3 790 568 2154 122 10 7 chr17 12183208 12183511 -73254969 + AluSq SINE Alu 1 304 -9 4873 134 9 31 chr17 12183511 12184099 -73254381 - MER54B LTR ERVL -225 568 1 2165 124 3 0 chr17 12184603 12184909 -73253571 + AluSx SINE Alu 1 307 -5 276 53 0 0 chr17 12185386 12185424 -73253056 + (TG)n Simple_repeat Simple_repeat 2 39 0 447 106 0 0 chr17 12186613 12186679 -73251801 + (CA)n Simple_repeat Simple_repeat 2 67 0 207 0 0 0 chr17 12188282 12188305 -73250175 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 284 196 71 0 chr17 12188851 12188907 -73249573 + L2 LINE L2 3252 3311 -2 435 0 0 0 chr17 12189059 12189111 -73249369 + MADE1 DNA Mariner 2 53 -27 1230 138 0 5 chr17 12189350 12189545 -73248935 + L1PB4 LINE L1 5954 6147 -9 770 239 151 48 chr17 12189873 12190271 -73248209 + MLT1J2 LTR MaLR 12 450 0 441 254 189 0 chr17 12190982 12191104 -73247376 + MER5A DNA MER1_type 39 183 -6 2074 133 133 13 chr17 12191340 12191722 -73246758 + MSTA LTR MaLR 1 428 0 351 285 84 9 chr17 12191951 12192165 -73246315 - L1ME4a LINE L1 -239 5882 5653 450 305 114 15 chr17 12192807 12193069 -73245411 - L1ME4a LINE L1 -1717 4429 4142 2392 89 0 0 chr17 12193765 12194058 -73244422 - AluSc SINE Alu -16 293 1 236 264 230 13 chr17 12194265 12194504 -73243976 - LTR33A LTR ERVL -7 516 226 1646 279 117 0 chr17 12194761 12195362 -73243118 + MER69 DNA AcHobo 5 675 -1851 303 322 0 0 chr17 12195363 12195450 -73243030 - L1MC4 LINE L1 -1341 6701 6615 225 226 0 0 chr17 12195457 12195510 -73242970 + (TA)n Simple_repeat Simple_repeat 1 53 0 234 273 0 0 chr17 12195520 12195608 -73242872 - L1MC4 LINE L1 -1340 6702 6615 288 243 0 0 chr17 12195610 12195684 -73242796 + (TA)n Simple_repeat Simple_repeat 1 74 0 388 224 47 0 chr17 12195695 12195780 -73242700 - L1MC4 LINE L1 -1339 6703 6615 2399 71 7 13 chr17 12195780 12196088 -73242392 - AluY SINE Alu -5 306 1 246 281 0 11 chr17 12196088 12196177 -73242303 + MER69 DNA AcHobo 686 773 -1753 249 245 213 38 chr17 12196467 12196630 -73241850 + MIR SINE MIR 13 190 -67 204 300 50 0 chr17 12197206 12197266 -73241214 + MER91C DNA MER1_type 32 94 -46 842 257 82 47 chr17 12197291 12197695 -73240785 + MLT1J1 LTR MaLR 21 438 -8 206 313 31 0 chr17 12198753 12198817 -73239663 + L2 LINE L2 2995 3060 -212 2398 89 3 0 chr17 12198884 12199188 -73239292 - AluY SINE Alu -6 305 1 387 0 0 0 chr17 12199190 12199233 -73239247 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 2156 78 3 7 chr17 12199233 12199516 -73238964 - AluY SINE Alu -29 282 1 22 35 0 0 chr17 12199650 12199679 -73238801 + AT_rich Low_complexity Low_complexity 1 29 0 640 233 0 23 chr17 12199981 12200114 -73238366 + FLAM_A SINE Alu 1 130 -3 299 261 30 12 chr17 12200180 12200332 -73238148 - L1MC4 LINE L1 -690 5431 5310 482 240 36 77 chr17 12200457 12200653 -73237827 - MLT1K LTR MaLR -2 586 399 324 346 39 0 chr17 12200705 12200861 -73237619 - MLT1K LTR MaLR -303 285 124 448 286 33 16 chr17 12201709 12201954 -73236526 + L1MEc LINE L1 1877 2125 -4271 * 1737 230 30 26 chr17 12201935 12202475 -73236005 + L1MEc LINE L1 2342 2883 -3332 2325 92 10 0 chr17 12202531 12202825 -73235655 + AluSx SINE Alu 1 297 -15 198 0 0 0 chr17 12202825 12202847 -73235633 + (GA)n Simple_repeat Simple_repeat 2 23 0 673 247 74 23 chr17 12203881 12204218 -73234262 - LTR33A LTR ERVL -2 521 137 23 33 0 0 chr17 12204970 12205000 -73233480 + AT_rich Low_complexity Low_complexity 1 30 0 840 183 23 17 chr17 12205998 12206173 -73232307 + MLT1B LTR MaLR 1 176 -214 1796 174 0 17 chr17 12206175 12206469 -73232011 + AluJb SINE Alu 1 289 -23 211 250 47 107 chr17 12206507 12206689 -73231791 + MIR SINE MIR 27 191 -71 351 0 0 0 chr17 12207096 12207135 -73231345 + (CA)n Simple_repeat Simple_repeat 2 40 0 181 278 124 57 chr17 12207236 12207310 -73231170 - L2 LINE L2 -222 3050 2982 2481 89 0 0 chr17 12207310 12207612 -73230868 + AluSg SINE Alu 1 302 -8 181 278 124 57 chr17 12207612 12207731 -73230749 - L2 LINE L2 -290 2982 2844 197 178 22 0 chr17 12209019 12209064 -73229416 + (CA)n Simple_repeat Simple_repeat 2 47 0 14174 189 32 17 chr17 12209457 12216027 -73222453 + L1PB1 LINE L1 6 6867 0 313 117 48 179 chr17 12216438 12216583 -73221897 - MER103 DNA DNA -18 148 23 276 313 22 11 chr17 12217783 12217965 -73220515 + L1ME3 LINE L1 1279 1462 -4961 386 336 13 7 chr17 12217971 12218120 -73220360 + L1ME3 LINE L1 1656 1805 -5126 391 303 112 26 chr17 12218219 12218753 -73219727 + L1ME3 LINE L1 1926 2543 -4532 4410 260 91 54 chr17 12219017 12220790 -73217690 + L1ME3 LINE L1 3308 5014 -1951 2171 135 67 0 chr17 12220790 12221131 -73217349 + THE1B LTR MaLR 1 364 0 4410 260 91 54 chr17 12221131 12222280 -73216200 + L1ME3 LINE L1 5014 6367 -598 1626 172 14 21 chr17 12222280 12222600 -73215880 + AluJb SINE Alu 1 318 0 4410 260 91 54 chr17 12222600 12222910 -73215570 + L1ME3 LINE L1 6367 6664 -301 528 157 25 41 chr17 12222976 12223097 -73215383 + L1ME3 LINE L1 6671 6789 -168 504 228 164 32 chr17 12223109 12223298 -73215182 + MLT1K LTR MaLR 373 586 -2 1951 106 16 0 chr17 12223406 12223690 -73214790 - AluY SINE Alu 0 313 26 1114 253 93 30 chr17 12224006 12224123 -73214357 + MLT1C LTR MaLR 1 109 -358 1737 151 0 15 chr17 12224123 12224394 -73214086 - AluJo SINE Alu -11 301 35 1114 253 93 30 chr17 12224394 12224715 -73213765 + MLT1C LTR MaLR 109 467 0 2410 75 0 7 chr17 12225104 12225411 -73213069 + AluSc SINE Alu 1 305 -4 322 130 0 0 chr17 12225611 12225665 -73212815 - L1MA6 LINE L1 0 6300 6247 814 181 36 0 chr17 12225685 12225823 -73212657 - FRAM SINE Alu -34 142 1 771 138 119 0 chr17 12225843 12226002 -73212478 - L1MA6 LINE L1 -56 6244 6067 199 351 45 27 chr17 12226253 12226364 -73212116 - L2 LINE L2 -18 3254 3142 602 284 101 0 chr17 12226446 12226664 -73211816 - MIR SINE MIR -14 248 9 1902 162 0 26 chr17 12227174 12227215 -73211265 - AluJo SINE Alu 0 312 271 180 0 0 0 chr17 12227215 12227235 -73211245 + (TTGG)n Simple_repeat Simple_repeat 4 23 0 1902 162 0 26 chr17 12227235 12227531 -73210949 - AluJo SINE Alu -41 271 1 719 199 31 82 chr17 12228280 12228476 -73210004 - MER5A DNA MER1_type -3 186 1 402 301 77 64 chr17 12228608 12228996 -73209484 + MLT1K LTR MaLR 187 579 -9 258 276 148 49 chr17 12230448 12230814 -73207666 + MLT1J LTR MaLR 110 511 0 31 26 0 0 chr17 12231540 12231578 -73206902 + AT_rich Low_complexity Low_complexity 1 38 0 15885 198 19 28 chr17 12232078 12237916 -73200564 + L1PA16 LINE L1 1026 6811 -6 23 0 0 0 chr17 12238074 12238097 -73200383 + AT_rich Low_complexity Low_complexity 1 23 0 1931 149 31 0 chr17 12238238 12238526 -73199954 + AluSx SINE Alu 1 297 -15 270 0 0 0 chr17 12238529 12238559 -73199921 + (TAAA)n Simple_repeat Simple_repeat 2 31 0 912 218 11 0 chr17 12238979 12239153 -73199327 + AluJb SINE Alu 137 312 0 304 151 0 27 chr17 12239153 12239226 -73199254 + GA-rich Low_complexity Low_complexity 2 72 0 202 246 31 15 chr17 12239237 12239302 -73199178 + GA-rich Low_complexity Low_complexity 1 66 0 305 262 19 37 chr17 12239309 12239416 -73199064 + L1M4 LINE L1 4316 4420 -1726 1120 101 11 6 chr17 12239423 12239601 -73198879 + (GAAA)n Simple_repeat Simple_repeat 1 179 0 716 315 102 68 chr17 12239656 12240548 -73197932 + L1MC4a LINE L1 3447 4375 -1771 7460 32 6 1 chr17 12240665 12241562 -73196918 + L1PA3 LINE L1 5254 6154 -1 376 345 43 17 chr17 12241584 12241819 -73196661 - L1M4 LINE L1 -1053 5093 4853 269 286 78 55 chr17 12241928 12242455 -73196025 + L1MC4a LINE L1 4626 5164 -982 361 231 49 140 chr17 12242663 12242906 -73195574 + L1MC4a LINE L1 5409 5629 -2179 334 233 125 42 chr17 12242952 12243072 -73195408 - L2 LINE L2 -13 3300 3171 400 267 30 0 chr17 12243087 12243222 -73195258 + L1MC4a LINE L1 5768 5906 -1902 1626 179 15 57 chr17 12244001 12244408 -73194072 + MLT1B LTR MaLR 1 390 0 628 129 14 86 chr17 12244462 12244551 -73193929 + L1MB3 LINE L1 6054 6131 -52 2251 62 13 13 chr17 12244551 12244856 -73193624 + AluY SINE Alu 1 305 -6 628 129 14 86 chr17 12244856 12244906 -73193574 + L1MB3 LINE L1 6131 6183 0 1022 68 0 0 chr17 12245487 12245619 -73192861 - AluY SINE Alu -11 300 169 2978 61 80 0 chr17 12245719 12245760 -73192720 - MLT2A1 LTR ERVL 0 444 408 216 0 0 0 chr17 12245760 12245784 -73192696 + (TA)n Simple_repeat Simple_repeat 2 25 0 2978 61 80 0 chr17 12245784 12246153 -73192327 - MLT2A1 LTR ERVL -36 408 1 284 231 22 66 chr17 12246317 12246408 -73192072 + MIR SINE MIR 106 192 -70 644 304 42 17 chr17 12248223 12248460 -73190020 - MIR SINE MIR 0 262 20 189 301 38 60 chr17 12249053 12249186 -73189294 - L2 LINE L2 -180 3092 2963 2195 110 10 3 chr17 12249237 12249545 -73188935 + AluSx SINE Alu 1 310 -2 544 243 71 136 chr17 12250698 12251152 -73187328 - Charlie8 DNA MER1_type -2182 235 16 365 299 42 60 chr17 12251157 12251324 -73187156 - MIR3 SINE MIR -37 171 8 190 280 13 53 chr17 12251391 12251466 -73187014 + L2 LINE L2 3201 3272 0 231 36 0 0 chr17 12251473 12251501 -73186979 + (TGGA)n Simple_repeat Simple_repeat 1 28 0 376 309 82 60 chr17 12251743 12251976 -73186504 + L1MC4a LINE L1 5683 5920 -1888 2771 10 0 0 chr17 12253281 12253588 -73184892 - AluYa5 SINE Alu -4 307 1 2146 118 3 7 chr17 12253883 12254189 -73184291 + AluSg SINE Alu 1 305 -5 336 250 0 0 chr17 12254764 12254844 -73183636 - MER58 DNA MER1_type -2136 284 205 235 326 51 0 chr17 12254984 12255082 -73183398 - L2 LINE L2 -9 3263 3161 326 258 93 10 chr17 12255304 12255401 -73183079 - L2 LINE L2 -19 3294 3190 1397 203 39 36 chr17 12255706 12256070 -73182410 - MLT1A1 LTR MaLR 0 365 1 458 199 122 15 chr17 12256123 12256254 -73182226 - MER58C DNA MER1_type -2 213 69 303 293 98 39 chr17 12256435 12256673 -73181807 + MIR3 SINE MIR 2 255 -7 2275 91 0 14 chr17 12257336 12257633 -73180847 + AluSc SINE Alu 1 293 -16 1849 174 29 66 chr17 12257748 12258230 -73180250 + MLT1C LTR MaLR 4 467 0 847 330 119 38 chr17 12258755 12259721 -73178759 + L1M4 LINE L1 3425 4471 -1675 362 243 56 36 chr17 12259915 12260132 -73178348 - MLT1I LTR MaLR -140 269 79 417 286 64 36 chr17 12260590 12261121 -73177359 + L1M4 LINE L1 2596 3141 -3005 24 0 0 0 chr17 12261181 12261205 -73177275 + AT_rich Low_complexity Low_complexity 1 24 0 243 122 0 0 chr17 12261536 12261585 -73176895 + (T)n Simple_repeat Simple_repeat 1 49 0 360 0 0 0 chr17 12261585 12261625 -73176855 + (TG)n Simple_repeat Simple_repeat 1 40 0 2379 95 3 0 chr17 12262239 12262545 -73175935 + AluSx SINE Alu 1 307 -5 342 335 62 22 chr17 12262957 12263181 -73175299 + L1ME4a LINE L1 5743 5975 -146 2292 90 0 20 chr17 12263181 12263481 -73174999 + AluSq SINE Alu 1 294 -19 229 280 0 13 chr17 12263481 12263556 -73174924 + HAL1b LINE L1 1226 1299 -49 494 225 0 29 chr17 12264211 12264349 -73174131 + L1ME4a LINE L1 5979 6112 -9 315 205 145 24 chr17 12265073 12265156 -73173324 + MIR3 SINE MIR 67 159 -49 306 0 0 0 chr17 12265286 12265320 -73173160 + (TA)n Simple_repeat Simple_repeat 2 35 0 2479 46 0 23 chr17 12265320 12265626 -73172854 - AluY SINE Alu -12 299 1 2405 125 9 60 chr17 12266961 12267409 -73171071 + L1PA15 LINE L1 5740 6164 -1 2341 100 0 0 chr17 12267528 12267829 -73170651 - AluY SINE Alu -10 301 1 666 356 62 12 chr17 12269589 12269993 -73168487 + L2 LINE L2 88 511 -2803 2132 128 0 3 chr17 12270198 12270487 -73167993 + AluSx SINE Alu 1 288 -24 508 279 52 96 chr17 12270966 12271085 -73167395 - L1MEc LINE L1 -3559 2570 2447 2255 121 0 0 chr17 12271085 12271390 -73167090 - AluSx SINE Alu -7 305 1 508 279 52 96 chr17 12271390 12271763 -73166717 - L1MEc LINE L1 -3682 2447 2145 2393 140 35 21 chr17 12271763 12271992 -73166488 - Tigger2a DNA MER2_type -2274 434 195 2121 116 10 0 chr17 12271992 12272286 -73166194 + AluY SINE Alu 1 297 -14 2393 140 35 21 chr17 12272286 12272484 -73165996 - Tigger2a DNA MER2_type -2513 195 1 508 279 52 96 chr17 12272484 12272639 -73165841 - L1MEc LINE L1 -3984 2145 1985 2302 84 0 7 chr17 12272759 12273058 -73165422 - AluSg SINE Alu -13 297 1 319 266 64 18 chr17 12273248 12273466 -73165014 - L1MEc LINE L1 -4733 1577 1350 7127 53 9 0 chr17 12273613 12274604 -73163876 + L1PA8 LINE L1 5174 6172 0 434 259 99 53 chr17 12274608 12274983 -73163497 - L1MEc LINE L1 -4923 1196 805 2474 255 98 29 chr17 12275044 12275060 -73163420 - L2 LINE L2 -9 3304 3291 2582 52 3 0 chr17 12275060 12275368 -73163112 + AluY SINE Alu 1 309 -2 2474 255 98 29 chr17 12275368 12276227 -73162253 - L2 LINE L2 -22 3291 2332 1557 264 58 36 chr17 12276227 12276757 -73161723 - MLT1F LTR MaLR 0 542 1 2474 255 98 29 chr17 12276757 12276940 -73161540 - L2 LINE L2 -981 2332 2163 5569 282 162 12 chr17 12278454 12281105 -73157375 + L2 LINE L2 28 3123 -190 1618 174 138 31 chr17 12281105 12281524 -73156956 + MLT1C LTR MaLR 4 467 0 5569 282 162 12 chr17 12281524 12281613 -73156867 + L2 LINE L2 3123 3197 -116 428 0 19 0 chr17 12281665 12281717 -73156763 + (TC)n Simple_repeat Simple_repeat 2 54 0 390 200 0 38 chr17 12281808 12281888 -73156592 + L2 LINE L2 3237 3313 0 2534 47 7 0 chr17 12282174 12282470 -73156010 - AluSp SINE Alu -15 298 1 1939 48 8 0 chr17 12283304 12283556 -73154924 - L1PA4 LINE L1 -20 6135 5882 1620 25 5 0 chr17 12283552 12283752 -73154728 + L1PA4 LINE L1 5678 5878 -277 * 213 212 16 69 chr17 12284092 12284281 -73154199 + (TA)n Simple_repeat Simple_repeat 2 180 0 * 353 99 123 31 chr17 12284260 12284480 -73154000 + (ATATG)n Simple_repeat Simple_repeat 1 240 0 246 83 102 9 chr17 12284591 12284699 -73153781 + (ATATG)n Simple_repeat Simple_repeat 3 120 0 263 164 0 97 chr17 12284714 12284909 -73153571 + (TA)n Simple_repeat Simple_repeat 2 177 0 * 359 131 89 30 chr17 12284769 12284937 -73153543 + (ATATG)n Simple_repeat Simple_repeat 3 180 0 211 205 103 13 chr17 12285142 12285298 -73153182 + (ATATG)n Simple_repeat Simple_repeat 2 171 0 293 204 72 24 chr17 12285309 12285528 -73152952 + (ATATG)n Simple_repeat Simple_repeat 1 229 0 1672 154 48 34 chr17 12285592 12285950 -73152530 + L1MB3 LINE L1 5814 6176 -7 2415 89 0 0 chr17 12286236 12286539 -73151941 + AluSq SINE Alu 1 303 -10 763 223 63 6 chr17 12287775 12287950 -73150530 - MIR SINE MIR -12 250 66 308 291 240 11 chr17 12288092 12288267 -73150213 + MIR SINE MIR 3 217 -45 441 346 33 5 chr17 12288720 12288922 -73149558 + MIR SINE MIR 20 228 -34 44 0 0 0 chr17 12289180 12289224 -73149256 + AT_rich Low_complexity Low_complexity 1 44 0 211 367 27 27 chr17 12290751 12290901 -73147579 - L2 LINE L2 -204 3068 2919 2023 124 0 29 chr17 12291892 12292199 -73146281 + AluSx SINE Alu 1 298 -14 325 195 35 13 chr17 12292368 12292481 -73145999 + MIR SINE MIR 70 147 -61 1236 268 118 8 chr17 12293114 12293614 -73144866 + MLT1H1 LTR MaLR 1 555 0 2456 181 40 11 chr17 12295494 12296023 -73142457 + MER74A LTR ERVL 3 546 -12 2230 108 3 25 chr17 12296905 12297220 -73141260 + AluSx SINE Alu 1 308 -4 886 207 73 17 chr17 12297243 12297422 -73141058 + AluJo SINE Alu 87 275 -37 1879 218 28 19 chr17 12297535 12298008 -73140472 - L1MEc LINE L1 -5880 516 40 2312 97 3 0 chr17 12298023 12298322 -73140158 - AluSg SINE Alu -10 300 1 2301 101 7 7 chr17 12299059 12299365 -73139115 + AluSq SINE Alu 1 306 -7 2576 53 3 0 chr17 12299625 12299927 -73138553 + AluY SINE Alu 1 303 -8 322 260 128 25 chr17 12300349 12300545 -73137935 - L2 LINE L2 -958 2356 2141 2202 129 3 0 chr17 12300910 12301220 -73137260 + AluSx SINE Alu 1 311 -1 965 292 113 24 chr17 12301835 12302515 -73135965 + L1ME4a LINE L1 5328 6080 -41 450 339 0 8 chr17 12304713 12304843 -73133637 + MIR SINE MIR 20 148 -60 2711 55 15 6 chr17 12304848 12305177 -73133303 + L1PA8 LINE L1 5841 6172 0 198 0 0 0 chr17 12305177 12305199 -73133281 + (GA)n Simple_repeat Simple_repeat 1 22 0 1061 150 6 12 chr17 12305955 12306128 -73132352 - FRAM SINE Alu -3 173 2 2202 214 137 9 chr17 12306289 12306844 -73131636 + L1MD3 LINE L1 7370 7995 0 3118 112 216 62 chr17 12307399 12307995 -73130485 + LTR12 LTR ERV1 1 688 0 2492 53 6 38 chr17 12308655 12308974 -73129506 - AluY SINE Alu -2 309 1 24 32 0 0 chr17 12309118 12309149 -73129331 + AT_rich Low_complexity Low_complexity 1 31 0 1178 218 45 37 chr17 12310740 12311120 -73127360 + LTR37A LTR ERV1 42 424 -2 2278 102 0 28 chr17 12312076 12312398 -73126082 - AluSq SINE Alu 0 313 1 345 322 70 0 chr17 12313074 12313189 -73125291 + MIR SINE MIR 8 130 -132 410 222 26 17 chr17 12313279 12313396 -73125084 + MIR SINE MIR 131 248 -14 1981 155 0 3 chr17 12313763 12314066 -73124414 - AluJb SINE Alu -10 302 1 505 294 113 5 chr17 12314963 12315184 -73123296 - MLT1L LTR MaLR -18 597 353 282 257 0 14 chr17 12315269 12315339 -73123141 - MLT1L LTR MaLR -379 236 168 1021 244 20 20 chr17 12315481 12315735 -73122745 - MIR SINE MIR -1 261 8 183 100 0 0 chr17 12315785 12315815 -73122665 + (TGAA)n Simple_repeat Simple_repeat 1 30 0 554 186 0 0 chr17 12316536 12316633 -73121847 + MER53 DNA DNA 1 97 -92 273 281 11 34 chr17 12316787 12316876 -73121604 + MIR SINE MIR 20 106 -102 962 178 76 16 chr17 12317857 12318042 -73120438 + MLT2B2 LTR ERVL 1 196 -319 1307 168 86 53 chr17 12318228 12318532 -73119948 + MLT2B2 LTR ERVL 161 474 -41 204 216 0 0 chr17 12318543 12318594 -73119886 + (TAGA)n Simple_repeat Simple_repeat 4 54 0 2443 202 115 18 chr17 12319277 12319823 -73118657 + L1MA10 LINE L1 5671 6281 -53 2207 110 3 3 chr17 12319823 12320122 -73118358 - AluSx SINE Alu -13 299 1 2443 202 115 18 chr17 12320122 12320174 -73118306 + L1MA10 LINE L1 6281 6327 -7 617 309 44 58 chr17 12320677 12321156 -73117324 + L2 LINE L2 2804 3275 -38 367 261 117 18 chr17 12322340 12322451 -73116029 - MLT1I LTR MaLR -6 403 282 308 320 25 8 chr17 12322505 12322627 -73115853 - MLT1J1 LTR MaLR -291 155 32 2473 86 0 6 chr17 12323604 12323919 -73114561 + AluSq SINE Alu 1 313 0 762 245 19 19 chr17 12324429 12324641 -73113839 + LTR9B LTR ERV1 7 218 -426 8164 109 161 28 chr17 12324646 12326143 -73112337 - pTR5 LTR ERV1 0 2438 743 2314 186 9 9 chr17 12326146 12326566 -73111914 + LTR9B LTR ERV1 225 644 0 195 42 0 0 chr17 12326839 12326863 -73111617 + (C)n Simple_repeat Simple_repeat 1 24 0 22 0 0 0 chr17 12327461 12327483 -73110997 + AT_rich Low_complexity Low_complexity 1 22 0 344 309 86 7 chr17 12328402 12328554 -73109926 - MIR SINE MIR -43 219 56 2264 105 0 0 chr17 12328972 12329267 -73109213 + AluSg SINE Alu 1 295 -15 186 191 0 0 chr17 12329268 12329310 -73109170 + (TA)n Simple_repeat Simple_repeat 1 42 0 23 0 0 0 chr17 12329658 12329681 -73108799 + AT_rich Low_complexity Low_complexity 1 23 0 2860 152 46 29 chr17 12329687 12330213 -73108267 - L1PB4 LINE L1 -14 6142 5608 5804 239 56 49 chr17 12330835 12333813 -73104667 - L1ME1 LINE L1 -6 6160 3161 180 0 0 0 chr17 12333814 12333834 -73104646 + (A)n Simple_repeat Simple_repeat 1 20 0 1578 175 0 25 chr17 12333836 12334121 -73104359 - AluJo SINE Alu -34 278 1 322 264 24 48 chr17 12334130 12334255 -73104225 - L1ME1 LINE L1 -2959 3187 3066 234 232 145 0 chr17 12334964 12335033 -73103447 - MLT1J LTR MaLR -201 310 232 226 242 73 40 chr17 12335209 12335333 -73103147 - L1P2 LINE L1 -658 5497 5370 275 320 0 0 chr17 12335712 12335809 -73102671 - L1P2 LINE L1 -1200 4946 4850 440 277 127 27 chr17 12335907 12336239 -73102241 - L1M4 LINE L1 -1447 4699 4335 196 228 41 98 chr17 12336345 12336468 -73102012 - L3 LINE CR1 -75 1502 1387 330 310 148 25 chr17 12336713 12336916 -73101564 - MIR SINE MIR -34 228 1 21 0 0 0 chr17 12337364 12337385 -73101095 + AT_rich Low_complexity Low_complexity 1 21 0 461 315 74 25 chr17 12337917 12338120 -73100360 - L2 LINE L2 -92 3221 3009 210 118 0 0 chr17 12338142 12338176 -73100304 + (T)n Simple_repeat Simple_repeat 1 34 0 35 71 0 0 chr17 12339563 12339633 -73098847 + AT_rich Low_complexity Low_complexity 1 70 0 503 316 156 5 chr17 12339776 12339994 -73098486 - MIR SINE MIR -1 261 11 1098 166 43 11 chr17 12340620 12340807 -73097673 + AluJo SINE Alu 1 193 -119 21 57 0 0 chr17 12340875 12340910 -73097570 + AT_rich Low_complexity Low_complexity 1 35 0 209 292 0 0 chr17 12342215 12342280 -73096200 + T-rich Low_complexity Low_complexity 1 65 0 239 243 87 19 chr17 12342497 12342600 -73095880 - MLT1L LTR MaLR -6 609 500 2222 112 3 10 chr17 12342956 12343260 -73095220 + AluSx SINE Alu 1 302 -10 270 0 0 0 chr17 12345162 12345192 -73093288 + (TG)n Simple_repeat Simple_repeat 2 31 0 1573 135 56 0 chr17 12346030 12346296 -73092184 - Tigger3b DNA MER2_type 0 1231 951 4291 126 152 2 chr17 12347013 12347854 -73090626 - Tigger3b DNA MER2_type -262 969 3 393 242 27 0 chr17 12347883 12348007 -73090473 - L1MC4 LINE L1 -152 7890 7654 16053 123 14 40 chr17 12348022 12349944 -73088536 + Tigger4(Zombi) DNA MER2_type 5 1974 -757 5421 110 30 29 chr17 12349944 12350944 -73087536 + L1PA13 LINE L1 5164 6161 -2 2135 121 3 34 chr17 12350953 12351275 -73087205 + AluSx SINE Alu 1 312 0 16053 123 14 40 chr17 12351275 12352140 -73086340 + Tigger4(Zombi) DNA MER2_type 1982 2731 0 1193 22 0 0 chr17 12352232 12352369 -73086111 + AluY SINE Alu 165 301 -10 364 298 101 22 chr17 12352421 12352599 -73085881 - L1MC4 LINE L1 -446 7596 7405 388 227 31 8 chr17 12352662 12352790 -73085690 - L1M4 LINE L1 -1623 4523 4393 2565 103 73 11 chr17 12352790 12353226 -73085254 + MER4C LTR ERV1 1 463 -2 272 237 8 59 chr17 12353257 12353375 -73085105 - L1M4 LINE L1 -1784 4362 4251 2909 259 102 16 chr17 12353398 12354787 -73083693 - L1M4 LINE L1 -1985 4161 2653 2361 79 0 7 chr17 12355444 12355748 -73082732 - AluY SINE Alu -8 303 2 1224 132 129 20 chr17 12356662 12356972 -73081508 - MSTA LTR MaLR 0 364 1 1717 163 22 47 chr17 12357146 12357509 -73080971 - MLT1A1 LTR MaLR -11 354 1 2376 80 0 0 chr17 12358849 12359151 -73079329 - AluY SINE Alu -9 302 1 238 325 12 24 chr17 12360384 12360467 -73078013 - MER5A DNA MER1_type -2 187 106 753 235 17 0 chr17 12361720 12361899 -73076581 + MER106A DNA MER1_type 2 183 -53 2080 124 16 7 chr17 12362012 12362319 -73076161 - AluSg SINE Alu 0 310 1 1571 250 75 36 chr17 12362406 12363323 -73075157 + L1ME3A LINE L1 5039 5987 -183 2668 109 55 63 chr17 12363429 12363845 -73074635 - MER84 LTR ERVI 0 507 93 2114 119 0 0 chr17 12363845 12364156 -73074324 - AluSx SINE Alu 0 311 1 2668 109 55 63 chr17 12364156 12364243 -73074237 - MER84 LTR ERVI -414 93 7 400 132 40 13 chr17 12364243 12364319 -73074161 - MER84 LTR ERVI -429 78 1 1717 158 0 85 chr17 12365672 12365850 -73072630 - AluJb SINE Alu -11 301 162 2209 101 16 0 chr17 12365850 12366158 -73072322 - AluSp SINE Alu 0 313 1 1717 158 0 85 chr17 12366158 12366308 -73072172 - AluJb SINE Alu -150 162 1 2117 121 0 0 chr17 12366331 12366620 -73071860 - AluSx SINE Alu -19 293 5 357 225 200 4 chr17 12366993 12367233 -73071247 + L1MEd LINE L1 739 1025 -5094 442 210 145 8 chr17 12367238 12367362 -73071118 + MER3 DNA MER1_type 10 150 -59 220 300 43 14 chr17 12367910 12367980 -73070500 + L2 LINE L2 3201 3272 0 534 302 119 41 chr17 12368141 12368528 -73069952 + L1MEd LINE L1 818 1234 -4885 29 28 0 0 chr17 12368575 12368611 -73069869 + AT_rich Low_complexity Low_complexity 1 36 0 23 0 0 0 chr17 12368667 12368690 -73069790 + AT_rich Low_complexity Low_complexity 1 23 0 230 344 6 38 chr17 12368753 12368910 -73069570 + HAL1 LINE L1 1450 1601 -906 2485 137 51 12 chr17 12368985 12369400 -73069080 - Tigger2a DNA MER2_type -3 431 1 547 292 72 11 chr17 12369437 12369831 -73068649 - LTR16A LTR ERVL 0 450 1 23 54 0 0 chr17 12370286 12370323 -73068157 + AT_rich Low_complexity Low_complexity 1 37 0 292 319 83 25 chr17 12375384 12375541 -73062939 - MIR SINE MIR -54 208 43 1074 136 41 0 chr17 12375896 12376065 -73062415 - AluSp SINE Alu -4 309 134 2168 121 10 16 chr17 12376066 12376380 -73062100 - AluSq SINE Alu -1 312 1 2039 131 3 3 chr17 12377278 12377575 -73060905 - AluSq SINE Alu -16 297 1 250 268 54 18 chr17 12377753 12377865 -73060615 + MARNA DNA Mariner 240 355 -231 305 204 159 0 chr17 12378221 12378334 -73060146 - MIR SINE MIR -54 208 78 2847 71 23 18 chr17 12378370 12378766 -73059714 + L1PB1 LINE L1 5754 6151 0 270 350 127 27 chr17 12378790 12379090 -73059390 - L2 LINE L2 -455 2859 2530 233 344 43 54 chr17 12379172 12379358 -73059122 + L2 LINE L2 2867 3050 -222 2597 11 0 0 chr17 12379941 12380223 -73058257 + AluYa5 SINE Alu 24 305 -6 239 270 0 0 chr17 12380280 12380343 -73058137 + MARNA DNA Mariner 312 374 -212 624 278 80 57 chr17 12380501 12380890 -73057590 + L1MEd LINE L1 318 715 -5404 22406 179 20 17 chr17 12380896 12386310 -73052170 + L1P4 LINE L1 7 6537 -1075 1750 149 0 44 chr17 12386310 12386649 -73051831 + AluSx SINE Alu 1 326 0 22406 179 20 17 chr17 12386649 12387340 -73051140 + L1P4 LINE L1 6537 7224 -388 1172 100 77 18 chr17 12387340 12387510 -73050970 + AluSg/x SINE Alu 131 310 0 452 194 194 69 chr17 12387511 12387743 -73050737 + L1MEd LINE L1 701 961 -5158 6893 151 39 43 chr17 12388148 12388348 -73050132 - L1MA4 LINE L1 -4 6296 6097 2375 157 51 10 chr17 12388348 12388757 -73049723 + MSTB LTR MaLR 1 426 0 6893 151 39 43 chr17 12388757 12390505 -73047975 - L1MA4 LINE L1 -203 6097 4359 1952 142 4 0 chr17 12390505 12390817 -73047663 - AluSx SINE Alu 0 313 1 6893 151 39 43 chr17 12390817 12391319 -73047161 - L1MA4 LINE L1 -1941 4359 3856 934 268 100 63 chr17 12391414 12392089 -73046391 - L1ME LINE L1 -339 5823 5174 2342 79 3 0 chr17 12392089 12392381 -73046099 + AluSp SINE Alu 1 293 -20 934 268 100 63 chr17 12392381 12392450 -73046030 - L1ME LINE L1 -988 5174 5109 6039 117 15 0 chr17 12392450 12393098 -73045382 - L1PA16 LINE L1 -9 6157 5520 207 0 0 0 chr17 12393098 12393121 -73045359 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1904 117 34 0 chr17 12393122 12393388 -73045092 - AluSc SINE Alu -31 278 4 6039 117 15 0 chr17 12393388 12394076 -73044404 - L1PA16 LINE L1 -645 5521 4802 934 268 100 63 chr17 12394076 12394482 -73043998 - L1ME LINE L1 -1053 5109 4634 * 2612 191 44 68 chr17 12394475 12395154 -73043326 - L1MB8 LINE L1 -6 6983 6321 1137 236 94 45 chr17 12395160 12395512 -73042968 - L1MB8 LINE L1 -1096 5861 5493 2621 153 24 24 chr17 12395514 12395938 -73042542 - MSTB LTR MaLR 0 426 3 9052 165 51 24 chr17 12395939 12397543 -73040937 - MSTB-int LTR MaLR 0 1651 5 1960 148 62 72 chr17 12397547 12398014 -73040466 - MSTB LTR MaLR 0 457 12 3821 216 128 104 chr17 12398014 12398316 -73040164 - L1MB8 LINE L1 -1463 5494 5201 2033 152 0 9 chr17 12398316 12398631 -73039849 - AluSx SINE Alu 0 312 1 3821 216 128 104 chr17 12398631 12398672 -73039808 - L1MB8 LINE L1 -1756 5201 5162 732 74 0 0 chr17 12398672 12398780 -73039700 + (TTCC)n Simple_repeat Simple_repeat 4 111 0 1780 142 7 11 chr17 12398784 12399059 -73039421 - AluJb SINE Alu -38 274 1 3821 216 128 104 chr17 12399059 12399249 -73039231 - L1MB8 LINE L1 -1797 5160 4976 1747 171 0 21 chr17 12399249 12399567 -73038913 - AluSx SINE Alu 0 312 1 3821 216 128 104 chr17 12399567 12399639 -73038841 - L1MB8 LINE L1 -1981 4976 4907 991 89 0 0 chr17 12399639 12399763 -73038717 - AluSp SINE Alu -189 124 1 3821 216 128 104 chr17 12399763 12400992 -73037488 - L1MB8 LINE L1 -2050 4907 3480 423 203 93 17 chr17 12400996 12401114 -73037366 - L1MB8 LINE L1 -6659 200 74 * 2523 167 20 28 chr17 12401110 12401383 -73037097 - L1MA7 LINE L1 -237 6054 5780 908 92 43 0 chr17 12401383 12401547 -73036933 + CT-rich Low_complexity Low_complexity 2 172 0 1831 112 58 0 chr17 12401547 12401806 -73036674 - AluSc SINE Alu -35 274 1 2523 167 20 28 chr17 12401806 12402034 -73036446 - L1MA7 LINE L1 -509 5782 5556 2081 210 51 60 chr17 12402032 12403160 -73035320 - L1M4c LINE L1 -4694 2265 1182 * 553 219 0 19 chr17 12403160 12403265 -73035215 - FRAM SINE Alu -73 103 1 789 247 158 42 chr17 12403306 12403386 -73035094 - L1M4 LINE L1 -2700 3446 3377 2445 75 3 0 chr17 12403386 12403681 -73034799 - AluY SINE Alu -15 296 1 789 247 158 42 chr17 12403681 12404245 -73034235 - L1M4 LINE L1 -2769 3377 2695 2107 121 3 17 chr17 12404245 12404542 -73033938 + AluSp SINE Alu 1 293 -20 789 247 158 42 chr17 12404542 12404672 -73033808 - L1M4 LINE L1 -3451 2695 2581 830 149 0 8 chr17 12404713 12404847 -73033633 + L1PA16 LINE L1 5592 5724 -442 1858 177 16 0 chr17 12404850 12405160 -73033320 + L1PA16 LINE L1 5846 6160 -6 2109 110 11 0 chr17 12405499 12405781 -73032699 - AluSc SINE Alu -24 285 1 290 278 91 68 chr17 12405783 12406269 -73032211 + L1ME3A LINE L1 3121 3617 -2529 2462 70 3 0 chr17 12406285 12406583 -73031897 - AluY SINE Alu -12 299 1 341 300 95 42 chr17 12406598 12406861 -73031619 + L1ME3A LINE L1 4800 5076 -1070 628 239 81 140 chr17 12406862 12406955 -73031525 + L1ME3A LINE L1 5258 5355 -815 2062 113 27 7 chr17 12406955 12407247 -73031233 - AluSx SINE Alu -14 298 1 628 239 81 140 chr17 12407247 12407909 -73030571 + L1ME3A LINE L1 5355 5968 -202 1937 159 10 0 chr17 12408048 12408356 -73030124 - AluJb SINE Alu -1 311 1 555 128 23 0 chr17 12408488 12408574 -73029906 + L1M4c LINE L1 15 102 -6282 2065 112 14 0 chr17 12408579 12408865 -73029615 + AluSq SINE Alu 1 290 -23 800 128 0 40 chr17 12408874 12408999 -73029481 + Tigger1 DNA MER2_type 2299 2418 0 1714 165 0 21 chr17 12409014 12409299 -73029181 - AluJo SINE Alu -33 279 1 391 132 105 0 chr17 12409306 12409382 -73029098 + L1MB4 LINE L1 6097 6180 0 265 335 19 19 chr17 12410127 12410285 -73028195 + L1M4c LINE L1 309 466 -5906 235 253 108 0 chr17 12410289 12410372 -73028108 + L1MC3 LINE L1 6084 6175 -1610 195 352 44 0 chr17 12410382 12410473 -73028007 + MIR SINE MIR 20 114 -148 4028 24 20 0 chr17 12410480 12410932 -73027548 - L1PA4 LINE L1 -3 6152 5692 675 262 116 30 chr17 12411345 12411578 -73026902 + MIR SINE MIR 8 260 -2 404 341 43 7 chr17 12411721 12411859 -73026621 - MIR3 SINE MIR -29 179 37 1463 272 84 4 chr17 12412186 12412683 -73025797 + L2 LINE L2 2169 2705 -609 2029 102 0 64 chr17 12412693 12413007 -73025473 + AluSg SINE Alu 1 294 -16 1169 226 4 9 chr17 12413101 12413331 -73025149 + MLT1A1 LTR MaLR 1 229 -136 313 236 0 0 chr17 12413330 12413385 -73025095 - Tigger3b DNA MER2_type -1176 55 1 * 482 159 396 0 chr17 12413385 12413462 -73025018 - L1M4b LINE L1 -1982 4975 4930 1916 86 4 8 chr17 12413462 12413717 -73024763 - AluSx SINE Alu -58 254 1 482 159 396 0 chr17 12413717 12413821 -73024659 - L1M4b LINE L1 -2027 4930 4722 1600 275 60 7 chr17 12413857 12414322 -73024158 - MER21B LTR ERV1 -62 801 312 2167 89 18 4 chr17 12414325 12414625 -73023855 - AluSx SINE Alu 0 304 1 2400 83 3 0 chr17 12414729 12415029 -73023451 + AluSx SINE Alu 1 301 -11 1067 199 29 126 chr17 12415029 12415370 -73023110 - MER21B LTR ERV1 -555 308 1 3598 244 26 88 chr17 12415370 12415694 -73022786 - L1M4b LINE L1 -2234 4723 4380 333 0 0 0 chr17 12415694 12415731 -73022749 + (TG)n Simple_repeat Simple_repeat 2 38 0 3598 244 26 88 chr17 12415731 12417134 -73021346 - L1M4b LINE L1 -2577 4380 2891 1998 144 10 3 chr17 12417134 12417432 -73021048 - AluJb SINE Alu -12 300 1 3598 244 26 88 chr17 12417432 12417443 -73021037 - L1M4b LINE L1 -4066 2891 2881 1537 131 58 4 chr17 12417443 12417703 -73020777 - L1MA3 LINE L1 -2 6303 6030 3598 244 26 88 chr17 12417703 12418234 -73020246 - L1M4b LINE L1 -4076 2881 2471 6442 230 50 46 chr17 12418412 12420135 -73018345 - L1M4b LINE L1 -4543 2416 701 1557 171 80 85 chr17 12420135 12420533 -73017947 - MSTD LTR MaLR 0 396 1 6442 230 50 46 chr17 12420533 12420972 -73017508 - L1M4b LINE L1 -6258 701 208 2369 63 3 10 chr17 12420972 12421272 -73017208 + AluY SINE Alu 1 298 -13 6442 230 50 46 chr17 12421272 12421468 -73017012 - L1M4b LINE L1 -6751 208 14 279 93 0 0 chr17 12421532 12421575 -73016905 + (TTCA)n Simple_repeat Simple_repeat 1 43 0 2086 142 0 3 chr17 12421654 12421965 -73016515 + AluSx SINE Alu 1 310 -2 838 312 73 30 chr17 12422005 12422594 -73015886 - L1M4 LINE L1 -1918 4228 3666 285 29 0 0 chr17 12422594 12422628 -73015852 + (TG)n Simple_repeat Simple_repeat 1 34 0 838 312 73 30 chr17 12422628 12423117 -73015363 - L1M4 LINE L1 -2480 3666 3103 439 194 271 21 chr17 12423418 12423562 -73014918 + MER5A DNA MER1_type 9 188 -1 322 329 12 0 chr17 12423562 12423638 -73014842 - MIR3 SINE MIR -50 158 82 239 226 0 48 chr17 12423668 12423730 -73014750 + GA-rich Low_complexity Low_complexity 2 60 0 213 295 118 114 chr17 12424562 12425095 -73013385 + L2 LINE L2 2245 2783 -531 3417 92 2 33 chr17 12425095 12425583 -73012897 + L1PB1 LINE L1 5679 6151 0 213 295 118 114 chr17 12425583 12425777 -73012703 + L2 LINE L2 2783 2975 -339 558 231 0 0 chr17 12426078 12426247 -73012233 + (TG)n Simple_repeat Simple_repeat 1 169 0 401 283 7 0 chr17 12426264 12426416 -73012064 + (TG)n Simple_repeat Simple_repeat 2 154 0 2563 62 0 0 chr17 12427080 12427384 -73011096 - AluY SINE Alu -7 304 1 194 243 0 0 chr17 12427646 12427683 -73010797 + L2 LINE L2 3005 3041 -272 2364 164 48 40 chr17 12427750 12428020 -73010460 + MER66B LTR ERV1 7 285 -201 1997 146 0 0 chr17 12428020 12428350 -73010130 + AluSx SINE Alu 1 330 0 2364 164 48 40 chr17 12428350 12428554 -73009926 + MER66B LTR ERV1 285 486 0 2399 91 0 3 chr17 12428672 12428981 -73009499 + AluSg SINE Alu 1 308 -2 349 239 46 55 chr17 12429219 12429328 -73009152 - L2 LINE L2 -2 3311 3204 979 237 30 92 chr17 12429393 12429731 -73008749 + MER102b DNA MER1_type 15 331 -10 2302 192 45 18 chr17 12430676 12431165 -73007315 + L1ME1 LINE L1 5538 6039 -127 754 212 30 30 chr17 12431163 12431263 -73007217 - L1M4 LINE L1 -1108 5038 4939 * 234 0 0 0 chr17 12431263 12431289 -73007191 + (TTTTG)n Simple_repeat Simple_repeat 5 30 0 754 212 30 30 chr17 12431289 12431391 -73007089 - L1M4 LINE L1 -1206 4940 4836 804 261 44 4 chr17 12431519 12431745 -73006735 - MIR SINE MIR -1 261 27 206 256 0 0 chr17 12431783 12431822 -73006658 + MIR SINE MIR 217 255 -7 198 307 27 13 chr17 12431942 12432017 -73006463 - L2 LINE L2 -15 3257 3182 205 281 0 67 chr17 12432151 12432240 -73006240 + MIR SINE MIR 109 191 -71 388 257 35 44 chr17 12432777 12432890 -73005590 - L2 LINE L2 0 3272 3161 2281 151 6 0 chr17 12433454 12433804 -73004676 + MLT1A1 LTR MaLR 14 365 0 930 161 39 39 chr17 12433822 12434027 -73004453 - L1MB4 LINE L1 0 6180 5976 1618 181 38 0 chr17 12434268 12434555 -73003925 - AluJo SINE Alu -3 309 12 1944 144 3 3 chr17 12434592 12434883 -73003597 - AluJb SINE Alu -21 291 1 1934 96 8 15 chr17 12435335 12435596 -73002884 - AluSc SINE Alu -11 298 40 180 111 0 0 chr17 12435596 12435623 -73002857 + (T)n Simple_repeat Simple_repeat 1 27 0 1833 189 3 0 chr17 12435623 12435956 -73002524 - L1MC3 LINE L1 0 7785 7452 2412 89 3 0 chr17 12435986 12436288 -73002192 + AluSp SINE Alu 1 303 -10 2423 97 0 0 chr17 12436634 12436945 -73001535 - AluSq SINE Alu -2 311 1 2387 69 0 13 chr17 12437897 12438200 -73000280 - AluY SINE Alu -11 300 2 560 308 87 21 chr17 12438490 12438779 -72999701 + L2 LINE L2 2852 3159 -154 271 160 13 40 chr17 12438786 12438861 -72999619 + (TA)n Simple_repeat Simple_repeat 1 73 0 894 211 97 0 chr17 12438861 12439046 -72999434 - AluJo SINE Alu -23 289 87 180 111 0 0 chr17 12439127 12439154 -72999326 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 221 330 68 10 chr17 12439351 12439454 -72999026 - L2 LINE L2 -227 3045 2937 2238 256 56 42 chr17 12439454 12440188 -72998292 + HsTC2a DNA MER2_type 1 744 0 542 242 0 6 chr17 12441165 12441322 -72997158 + CT-rich Low_complexity Low_complexity 1 156 0 411 276 26 0 chr17 12441654 12441771 -72996709 - MIR SINE MIR -56 152 23 2133 142 0 0 chr17 12442308 12442617 -72995863 - AluSx SINE Alu -3 309 1 802 158 7 7 chr17 12442718 12442857 -72995623 + MIR SINE MIR 65 203 -59 250 200 0 17 chr17 12442909 12442969 -72995511 - L1MEd LINE L1 -4868 1251 1193 2050 154 19 50 chr17 12443001 12443153 -72995327 + MLT1A1 LTR MaLR 1 156 -209 2273 113 0 3 chr17 12443153 12443455 -72995025 + AluSx SINE Alu 1 301 -11 2050 154 19 50 chr17 12443455 12443679 -72994801 + MLT1A1 LTR MaLR 156 365 0 362 265 60 11 chr17 12443854 12444001 -72994479 + MLT1J2 LTR MaLR 32 154 -296 180 297 69 30 chr17 12444057 12444158 -72994322 + MER5C DNA MER1_type 2 106 -218 201 200 43 14 chr17 12444197 12444267 -72994213 + MER5C DNA MER1_type 208 279 -45 297 254 46 31 chr17 12444312 12444442 -72994038 + MLT1J LTR MaLR 325 456 -55 23 54 0 0 chr17 12444554 12444591 -72993889 + AT_rich Low_complexity Low_complexity 1 37 0 1008 83 0 0 chr17 12444793 12444914 -72993566 + AluSp SINE Alu 103 223 -90 1666 171 42 90 chr17 12445185 12445450 -72993030 - MLT1C LTR MaLR -32 435 200 2089 142 0 3 chr17 12445450 12445746 -72992734 - AluSx SINE Alu -17 295 1 1666 171 42 90 chr17 12445746 12445937 -72992543 - MLT1C LTR MaLR -267 200 1 229 307 148 10 chr17 12446872 12446973 -72991507 + MIR3 SINE MIR 88 202 -6 306 77 0 0 chr17 12446998 12447037 -72991443 - AluSp SINE Alu -135 168 130 1562 168 119 6 chr17 12448122 12448450 -72990030 + MLT1A1 LTR MaLR 1 365 0 1842 78 0 47 chr17 12448516 12448774 -72989706 + AluSg SINE Alu 1 246 -64 198 103 0 0 chr17 12448774 12448803 -72989677 + (A)n Simple_repeat Simple_repeat 1 29 0 437 244 61 1 chr17 12449672 12449796 -72988684 + MIR3 SINE MIR 67 200 -8 182 227 152 30 chr17 12449810 12449876 -72988604 + L3b LINE CR1 1257 1330 -253 23 0 0 0 chr17 12450270 12450293 -72988187 + AT_rich Low_complexity Low_complexity 1 23 0 1687 203 98 21 chr17 12450314 12450783 -72987697 + MLT1D LTR MaLR 1 505 0 2149 186 9 9 chr17 12451072 12451492 -72986988 - LTR9B LTR ERV1 0 644 225 4028 122 60 35 chr17 12451495 12452324 -72986156 + pTR5 LTR ERV1 743 1592 -846 182 211 0 0 chr17 12452447 12452485 -72985995 - MIR SINE MIR -118 144 107 2443 58 0 0 chr17 12453828 12454119 -72984361 - AluY SINE Alu -20 291 1 23 33 0 0 chr17 12454636 12454666 -72983814 + AT_rich Low_complexity Low_complexity 1 30 0 2435 69 0 3 chr17 12457652 12457955 -72980525 + AluY SINE Alu 1 302 -9 265 68 120 0 chr17 12458249 12458366 -72980114 + (TA)n Simple_repeat Simple_repeat 2 132 0 197 114 49 57 chr17 12458336 12458459 -72980021 + (TTATA)n Simple_repeat Simple_repeat 3 124 0 * 198 0 0 0 chr17 12459225 12459247 -72979233 + (TTAA)n Simple_repeat Simple_repeat 4 25 0 2090 106 7 3 chr17 12459716 12460037 -72978443 + AluSx SINE Alu 1 322 0 404 343 48 12 chr17 12465966 12466132 -72972348 - MER5B DNA MER1_type -6 172 1 722 255 6 6 chr17 12467287 12467448 -72971032 + MLT1E LTR MaLR 1 161 -432 384 213 14 72 chr17 12467643 12467801 -72970679 + L1MB8 LINE L1 6022 6176 -2 973 111 26 0 chr17 12468331 12468484 -72969996 + L1MA2 LINE L1 6148 6304 0 344 233 35 17 chr17 12468632 12468748 -72969732 + MLT1J LTR MaLR 1 118 -393 1139 200 61 61 chr17 12468751 12469111 -72969369 + MLT1B LTR MaLR 4 363 -27 607 266 65 47 chr17 12469209 12469487 -72968993 + MLT1J LTR MaLR 229 511 0 291 297 22 0 chr17 12469561 12469652 -72968828 + MER20B DNA MER1_type 65 157 -626 516 96 0 0 chr17 12469695 12469768 -72968712 + U3 snRNA snRNA 1 73 -144 229 143 41 0 chr17 12469972 12470021 -72968459 + (CA)n Simple_repeat Simple_repeat 2 52 0 423 0 0 0 chr17 12470537 12470584 -72967896 + (CA)n Simple_repeat Simple_repeat 2 48 0 2102 270 94 15 chr17 12471865 12472787 -72965693 + L1MEc LINE L1 56 1050 -5346 2233 103 0 3 chr17 12472792 12473093 -72965387 + AluSg SINE Alu 1 300 -10 635 201 28 14 chr17 12473104 12473248 -72965232 + L1MA10 LINE L1 6179 6324 -10 431 241 0 35 chr17 12474568 12474684 -72963796 - L3 LINE CR1 -1133 444 333 720 232 140 48 chr17 12475642 12476021 -72962459 + MLT1C LTR MaLR 54 467 0 490 175 38 8 chr17 12476031 12476205 -72962275 - MER58A DNA MER1_type 0 224 6 558 0 0 0 chr17 12476911 12476973 -72961507 + (TA)n Simple_repeat Simple_repeat 2 63 0 536 332 41 108 chr17 12477703 12479122 -72959358 + L2 LINE L2 1947 3271 -1 370 219 12 21 chr17 12479343 12479503 -72958977 + MER20 DNA MER1_type 1 214 -5 362 219 65 49 chr17 12479604 12479727 -72958753 + L1MC/D LINE L1 5685 5809 -1999 1769 140 16 42 chr17 12479746 12479887 -72958593 + AluSx SINE Alu 5 148 -164 2315 32 43 0 chr17 12479887 12480168 -72958312 + AluY SINE Alu 1 293 -18 1769 140 16 42 chr17 12480168 12480334 -72958146 + AluSx SINE Alu 148 304 -8 952 97 15 0 chr17 12481130 12481264 -72957216 + AluSq/x SINE Alu 1 136 -176 2281 106 0 3 chr17 12481264 12481567 -72956913 + AluSx SINE Alu 1 302 -10 306 0 0 0 chr17 12481571 12481605 -72956875 + (TAA)n Simple_repeat Simple_repeat 2 35 0 2716 231 42 27 chr17 12481640 12482481 -72955999 - L1ME2 LINE L1 -2 6162 5302 971 194 227 12 chr17 12482481 12482723 -72955757 + AluJo SINE Alu 1 294 -8 2716 231 42 27 chr17 12482723 12482817 -72955663 - L1ME2 LINE L1 -862 5302 5211 222 171 0 0 chr17 12482817 12482858 -72955622 + CT-rich Low_complexity Low_complexity 1 41 0 1917 157 4 0 chr17 12482893 12483173 -72955307 - AluSq SINE Alu -32 281 1 1393 213 73 60 chr17 12483173 12483802 -72954678 - L1ME2 LINE L1 -941 5205 4569 226 382 0 0 chr17 12483908 12483984 -72954496 + G-rich Low_complexity Low_complexity 5 80 0 638 235 84 112 chr17 12484001 12484237 -72954243 + HAL1 LINE L1 1408 1649 -858 1672 161 39 7 chr17 12484237 12484522 -72953958 + AluJo SINE Alu 1 294 -18 638 235 84 112 chr17 12484522 12484859 -72953621 + HAL1 LINE L1 1649 1965 -542 239 250 113 0 chr17 12484876 12484956 -72953524 + HAL1 LINE L1 2035 2123 -384 2277 170 20 27 chr17 12485583 12486070 -72952410 + L1MB3 LINE L1 5700 6183 0 270 81 0 0 chr17 12486098 12486135 -72952345 + (CA)n Simple_repeat Simple_repeat 1 37 0 1732 135 49 21 chr17 12486680 12486968 -72951512 - AluJb SINE Alu -16 296 1 537 198 147 30 chr17 12488044 12488241 -72950239 + L1MC5 LINE L1 7631 7850 -111 894 135 0 0 chr17 12488499 12488632 -72949848 + FLAM_C SINE Alu 1 133 0 203 209 30 104 chr17 12488704 12488771 -72949709 + MIR SINE MIR 20 81 -181 325 279 115 44 chr17 12489051 12489441 -72949039 + HAL1 LINE L1 1060 1477 -1030 293 152 0 0 chr17 12493742 12493788 -72944692 + MLT1D-int LTR MaLR 987 1032 -339 * 527 223 42 58 chr17 12493786 12493987 -72944493 + MLT1D-int LTR MaLR 1237 1371 0 375 256 34 26 chr17 12493987 12494104 -72944376 + MLT1D LTR MaLR 1 118 -387 191 260 41 55 chr17 12495434 12495507 -72942973 + L2 LINE L2 3200 3271 -1 252 239 0 0 chr17 12495548 12495594 -72942886 + LTR67 LTR ERVL 506 551 -6 204 289 0 67 chr17 12496511 12496601 -72941879 + L2 LINE L2 3185 3268 -4 1070 244 19 40 chr17 12496977 12497301 -72941179 + MLT1H LTR MaLR 3 319 -230 2199 98 0 0 chr17 12497907 12498226 -72940254 + AluSq SINE Alu 1 319 0 835 168 0 0 chr17 12498696 12498827 -72939653 + FLAM_C SINE Alu 1 131 -2 228 329 81 34 chr17 12498951 12499100 -72939380 + MIR SINE MIR 106 261 -1 483 249 40 35 chr17 12499320 12499486 -72938994 + MIR SINE MIR 18 179 -63 2414 62 3 0 chr17 12550918 12551206 -72887274 + AluY SINE Alu 13 301 -10 21 36 0 0 chr17 12551426 12551454 -72887026 + AT_rich Low_complexity Low_complexity 1 28 0 2135 82 37 10 chr17 12552293 12552587 -72885893 + AluSg1 SINE Alu 1 302 -7 2078 112 3 3 chr17 12552597 12552882 -72885598 + AluSp SINE Alu 1 285 -28 2149 110 4 0 chr17 12554098 12554426 -72884054 - AluSc SINE Alu 0 329 1 403 264 84 50 chr17 12554495 12554896 -72883584 + MLT1G1 LTR MaLR 39 482 -113 1633 214 97 7 chr17 12554903 12555324 -72883156 - MLT1C LTR MaLR -8 459 1 302 277 50 25 chr17 12555324 12555440 -72883040 + MLT1G1 LTR MaLR 477 595 0 247 263 20 20 chr17 12556909 12557008 -72881472 - LTR16A1 LTR ERVL 0 457 359 220 293 85 0 chr17 12557094 12557176 -72881304 + MIR SINE MIR 20 108 -100 802 269 81 27 chr17 12557762 12558060 -72880420 - L2 LINE L2 -1 3312 2999 423 0 0 0 chr17 12558076 12558123 -72880357 + (TG)n Simple_repeat Simple_repeat 1 47 0 837 205 54 0 chr17 12558229 12558395 -72880085 + MER5B DNA MER1_type 1 175 -3 1824 221 7 38 chr17 12558429 12558790 -72879690 + MLT2D LTR ERVL 3 351 -63 2209 116 3 0 chr17 12558790 12559091 -72879389 + AluSg SINE Alu 1 302 -8 1824 221 7 38 chr17 12559091 12559154 -72879326 + MLT2D LTR ERVL 351 414 0 494 276 71 34 chr17 12559154 12559229 -72879251 - L2 LINE L2 -569 2745 2674 1694 174 111 38 chr17 12559229 12559653 -72878827 + MSTB2 LTR MaLR 1 455 -2 494 276 71 34 chr17 12559653 12559816 -72878664 - L2 LINE L2 -640 2674 2498 1694 188 79 9 chr17 12560685 12561026 -72877454 + MLT1A1 LTR MaLR 1 365 0 256 265 44 0 chr17 12561184 12561252 -72877228 - L2 LINE L2 -7 3265 3195 328 169 12 12 chr17 12561643 12561726 -72876754 + (TA)n Simple_repeat Simple_repeat 1 83 0 1688 174 51 21 chr17 12561769 12562103 -72876377 + MER2 DNA MER2_type 1 344 0 35 54 0 0 chr17 12562192 12562248 -72876232 + AT_rich Low_complexity Low_complexity 1 56 0 2257 70 6 57 chr17 12562720 12563036 -72875444 + AluY SINE Alu 1 300 -11 492 332 79 30 chr17 12563073 12563678 -72874802 + L1M4 LINE L1 2765 3399 -2747 24 0 0 0 chr17 12564022 12564046 -72874434 + AT_rich Low_complexity Low_complexity 1 24 0 233 308 43 26 chr17 12565030 12565147 -72873333 - L2 LINE L2 -1 3271 3153 430 113 127 0 chr17 12565589 12565660 -72872820 + MADE1 DNA Mariner 1 80 0 2377 70 3 10 chr17 12566346 12566645 -72871835 - AluY SINE Alu -14 297 1 1557 106 0 5 chr17 12566674 12566881 -72871599 + AluSg/x SINE Alu 92 297 -15 475 286 16 81 chr17 12566881 12566981 -72871499 + MER5A DNA MER1_type 17 122 -67 1989 146 3 0 chr17 12566981 12567275 -72871205 + AluSx SINE Alu 1 295 -17 2269 72 23 20 chr17 12567275 12567579 -72870901 + AluY SINE Alu 1 305 -6 475 286 16 81 chr17 12567579 12567662 -72870818 + MER5A DNA MER1_type 120 189 0 414 283 0 0 chr17 12569011 12569170 -72869310 + (TG)n Simple_repeat Simple_repeat 1 159 0 2166 107 9 28 chr17 12570066 12570383 -72868097 - AluSx SINE Alu -1 311 1 2091 83 38 10 chr17 12571065 12571354 -72867126 + AluSg1 SINE Alu 1 297 -12 2466 84 3 3 chr17 12571364 12571672 -72866808 + AluSp SINE Alu 1 308 -5 2453 191 62 28 chr17 12571674 12571968 -72866512 - L1MA9 LINE L1 -38 6274 5991 2020 140 0 10 chr17 12571968 12572276 -72866204 - AluSx SINE Alu -7 305 1 2453 191 62 28 chr17 12572276 12572579 -72865901 - L1MA9 LINE L1 -321 5991 5657 1798 226 108 10 chr17 12572743 12573226 -72865254 + MER74A LTR ERVL 1 530 -28 21 0 0 0 chr17 12573434 12573455 -72865025 + AT_rich Low_complexity Low_complexity 1 21 0 2266 102 13 3 chr17 12573460 12573763 -72864717 + AluSg SINE Alu 1 306 -4 1274 103 6 0 chr17 12574564 12574729 -72863751 - AluSq SINE Alu -14 299 134 2238 113 0 13 chr17 12574729 12575039 -72863441 - AluSx SINE Alu -6 306 1 2016 88 4 0 chr17 12575039 12575311 -72863169 - L1PB1 LINE L1 -59 6092 5820 984 202 17 17 chr17 12575494 12575732 -72862748 - MER74A LTR ERVL -149 409 172 354 245 11 21 chr17 12576228 12576322 -72862158 + MER5B DNA MER1_type 1 93 -85 1701 186 21 53 chr17 12577420 12577643 -72860837 - MLT1A1 LTR MaLR 0 365 157 2141 138 0 7 chr17 12577643 12577941 -72860539 - AluSx SINE Alu -16 296 1 1701 186 21 53 chr17 12577941 12578094 -72860386 - MLT1A1 LTR MaLR -208 157 1 298 294 114 27 chr17 12578171 12578355 -72860125 - MIR SINE MIR -12 250 51 779 328 91 11 chr17 12578491 12579021 -72859459 - L2 LINE L2 -4 3309 2737 841 202 32 128 chr17 12579031 12579102 -72859378 - L1ME1 LINE L1 -5 6161 6085 2412 165 34 0 chr17 12579102 12579514 -72858966 - MSTB LTR MaLR 0 426 1 841 202 32 128 chr17 12579514 12579754 -72858726 - L1ME1 LINE L1 -81 6085 5880 * 2498 235 71 40 chr17 12579738 12580710 -72857770 - L1M4 LINE L1 -2107 4039 3038 1307 230 122 68 chr17 12580710 12580787 -72857693 - L1MEc LINE L1 -5831 565 494 2362 78 3 0 chr17 12580787 12581082 -72857398 + AluY SINE Alu 1 296 -15 1307 230 122 68 chr17 12581082 12581338 -72857142 - L1MEc LINE L1 -5902 494 196 2453 79 3 0 chr17 12581338 12581643 -72856837 + AluSp SINE Alu 1 306 -7 1307 230 122 68 chr17 12581643 12581790 -72856690 - L1MEc LINE L1 -6200 196 58 906 284 95 31 chr17 12581821 12582462 -72856018 - L2 LINE L2 -568 2746 2065 221 297 99 0 chr17 12582515 12582626 -72855854 + L2 LINE L2 3116 3237 -35 339 25 0 0 chr17 12582634 12582674 -72855806 + (TGAA)n Simple_repeat Simple_repeat 1 40 0 183 152 0 0 chr17 12584422 12584468 -72854012 + (CA)n Simple_repeat Simple_repeat 1 46 0 1710 212 3 54 chr17 12585249 12585640 -72852840 - MLT1A2 LTR MaLR 0 374 4 393 286 143 60 chr17 12585743 12586176 -72852304 + L2 LINE L2 2841 3309 -4 216 256 35 58 chr17 12586828 12586914 -72851566 - L2 LINE L2 -3 3269 3186 1641 163 14 3 chr17 12587885 12588179 -72850301 + L1MC1 LINE L1 6037 6333 0 1498 160 113 35 chr17 12588403 12588721 -72849759 - MER2 DNA MER2_type 0 344 2 2134 111 13 7 chr17 12589346 12589652 -72848828 - AluSg SINE Alu -2 308 1 291 28 0 0 chr17 12589654 12589690 -72848790 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 850 164 8 0 chr17 12589706 12589840 -72848640 - FRAM SINE Alu -41 135 1 218 186 0 0 chr17 12589951 12589994 -72848486 - MIR SINE MIR -147 115 73 479 297 32 43 chr17 12591072 12591257 -72847223 + LTR33 LTR ERVL 1 183 -338 2567 48 0 7 chr17 12591408 12591702 -72846778 - AluY SINE Alu -14 297 6 224 216 54 68 chr17 12593196 12593270 -72845210 - L2 LINE L2 -5 3308 3236 2548 50 0 0 chr17 12594582 12594880 -72843600 + AluY SINE Alu 1 298 -13 1848 113 0 0 chr17 12594981 12595267 -72843213 - AluSx SINE Alu 0 321 36 1927 182 25 4 chr17 12596265 12596724 -72841756 + MLT2B1 LTR ERVL 2 515 0 2179 179 47 7 chr17 12596766 12597169 -72841311 + MSTB1 LTR MaLR 1 419 -13 294 247 118 0 chr17 12597180 12597265 -72841215 - MIR SINE MIR -99 163 69 2112 107 0 0 chr17 12597337 12597617 -72840863 + AluSx SINE Alu 1 280 -32 334 256 22 11 chr17 12597749 12597839 -72840641 - MIR SINE MIR -167 95 5 195 232 0 0 chr17 12598245 12598301 -72840179 + (TA)n Simple_repeat Simple_repeat 1 56 0 309 310 9 18 chr17 12598372 12598485 -72839995 - MIR3 SINE MIR -3 205 94 308 268 52 88 chr17 12598722 12598916 -72839564 + MIR SINE MIR 76 262 0 570 264 92 0 chr17 12599636 12599799 -72838681 - MIR SINE MIR -5 257 80 4116 120 20 16 chr17 12600919 12601560 -72836920 - LTR9B LTR ERV1 0 644 1 213 94 0 0 chr17 12601616 12601648 -72836832 + (CAA)n Simple_repeat Simple_repeat 2 33 0 4951 143 39 1 chr17 12602814 12603694 -72834786 + L1 LINE L1 4125 5037 -1109 493 7 119 34 chr17 12603716 12604166 -72834314 + (TA)n Simple_repeat Simple_repeat 1 488 0 386 140 53 12 chr17 12604166 12604337 -72834143 + (TATAA)n Simple_repeat Simple_repeat 2 179 0 419 204 57 18 chr17 12604352 12604689 -72833791 + (CATAT)n Simple_repeat Simple_repeat 1 350 0 188 127 66 60 chr17 12604702 12604868 -72833612 + (CATAT)n Simple_repeat Simple_repeat 4 170 0 286 125 64 64 chr17 12604882 12605167 -72833313 + (CATAT)n Simple_repeat Simple_repeat 1 285 0 226 106 56 56 chr17 12605170 12605349 -72833131 + (TA)n Simple_repeat Simple_repeat 1 179 0 * 262 125 14 14 chr17 12605315 12605387 -72833093 + (TAA)n Simple_repeat Simple_repeat 3 74 0 2308 89 52 3 chr17 12605399 12605898 -72832582 - L1P2 LINE L1 -553 5601 5062 2884 53 8 11 chr17 12605898 12606260 -72832220 + L1PA8 LINE L1 5792 6165 -7 303 331 57 62 chr17 12606265 12606796 -72831684 + L1M4 LINE L1 3759 4286 -1860 355 269 11 0 chr17 12606861 12606954 -72831526 - MIR SINE MIR -2 260 167 565 235 136 4 chr17 12607039 12607222 -72831258 + MIR SINE MIR 58 262 0 22 0 0 0 chr17 12607330 12607352 -72831128 + AT_rich Low_complexity Low_complexity 1 22 0 3415 170 59 12 chr17 12607356 12608182 -72830298 - L1MC1 LINE L1 -346 5987 5122 684 202 62 28 chr17 12608191 12608369 -72830111 + MER21B LTR ERV1 626 809 -54 8311 220 46 41 chr17 12608401 12611235 -72827245 - L1M4c LINE L1 -1725 4245 1382 180 0 0 0 chr17 12611236 12611256 -72827224 + (T)n Simple_repeat Simple_repeat 1 20 0 307 100 0 0 chr17 12611256 12611296 -72827184 - AluY SINE Alu -196 105 66 43135 30 21 1 chr17 12611311 12617340 -72821140 - L1PA2 LINE L1 -1 6154 3 3457 279 68 17 chr17 12617346 12617762 -72820718 - L1M4c LINE L1 -4641 1250 856 249 33 0 0 chr17 12617762 12617792 -72820688 + (TC)n Simple_repeat Simple_repeat 1 30 0 3457 279 68 17 chr17 12617792 12619218 -72819262 - L1M4c LINE L1 -5035 856 7 647 282 17 4 chr17 12619215 12619456 -72819024 - L1M4 LINE L1 -1762 4384 4141 * 311 311 40 128 chr17 12619864 12620394 -72818086 - L3 LINE CR1 -2 1575 1093 340 250 135 10 chr17 12620960 12621064 -72817416 - MIR3 SINE MIR -4 204 88 231 36 0 0 chr17 12621461 12621489 -72816991 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 442 221 64 50 chr17 12621739 12621879 -72816601 + L1MC4a LINE L1 5622 5763 -2045 258 264 14 14 chr17 12621978 12622050 -72816430 + CT-rich Low_complexity Low_complexity 1 72 0 24 0 0 0 chr17 12622101 12622125 -72816355 + AT_rich Low_complexity Low_complexity 1 24 0 1220 255 153 98 chr17 12622292 12622696 -72815784 - L1MC4 LINE L1 -127 7681 7301 1890 194 0 44 chr17 12622696 12623103 -72815377 + MLT1B LTR MaLR 1 389 -1 1220 255 153 98 chr17 12623103 12624051 -72814429 - L1MC4 LINE L1 -507 7301 6275 330 274 61 71 chr17 12624127 12624339 -72814141 + L1MC4a LINE L1 5851 6060 -1748 257 153 0 17 chr17 12624892 12624951 -72813529 + CT-rich Low_complexity Low_complexity 1 58 0 990 203 54 56 chr17 12625208 12625570 -72812910 + MSTB2 LTR MaLR 3 447 -10 180 77 0 0 chr17 12625585 12625611 -72812869 + (TG)n Simple_repeat Simple_repeat 1 26 0 6118 139 21 26 chr17 12625979 12626412 -72812068 - L1MC1 LINE L1 0 6333 5900 2234 100 0 20 chr17 12626412 12626713 -72811767 - AluSx SINE Alu -17 295 1 6118 139 21 26 chr17 12626713 12626831 -72811649 - L1MC1 LINE L1 -433 5900 5783 2188 221 25 10 chr17 12626831 12627310 -72811170 + MER66B LTR ERV1 1 486 0 6118 139 21 26 chr17 12627310 12627972 -72810508 - L1MC1 LINE L1 -550 5783 5122 867 254 102 25 chr17 12628137 12628412 -72810068 + MLT1I LTR MaLR 114 409 0 312 335 206 0 chr17 12628948 12629118 -72809362 - MIR SINE MIR -11 251 47 24 0 0 0 chr17 12629696 12629720 -72808760 + AT_rich Low_complexity Low_complexity 1 24 0 415 239 57 45 chr17 12630116 12630292 -72808188 - L1ME4a LINE L1 0 6121 5944 354 299 112 22 chr17 12630355 12630579 -72807901 + MIR SINE MIR 17 260 -2 2416 74 0 0 chr17 12630651 12630947 -72807533 - AluSg1 SINE Alu -13 296 1 452 283 136 29 chr17 12630954 12631226 -72807254 - L1ME4a LINE L1 -297 5824 5524 1177 204 37 69 chr17 12631471 12631848 -72806632 - MLT1A1 LTR MaLR 0 365 1 938 186 39 20 chr17 12632145 12632349 -72806131 + MER3 DNA MER1_type 1 208 -1 264 216 0 0 chr17 12632307 12632358 -72806122 - MER3 DNA MER1_type -119 90 40 * 217 309 0 0 chr17 12632403 12632458 -72806022 + MIR SINE MIR 90 144 -64 188 385 0 0 chr17 12632447 12632512 -72805968 - MIR SINE MIR -92 116 52 * 1667 172 24 10 chr17 12632610 12632901 -72805579 - AluJo SINE Alu -17 295 1 517 299 120 25 chr17 12632953 12633194 -72805286 + L2 LINE L2 3050 3313 0 299 311 68 0 chr17 12633556 12633659 -72804821 + MIR SINE MIR 132 241 -21 183 80 0 0 chr17 12633923 12633948 -72804532 + (CCCTAA)n Simple_repeat Simple_repeat 1 25 0 26 64 0 0 chr17 12635067 12635114 -72803366 + AT_rich Low_complexity Low_complexity 1 47 0 3415 191 8 33 chr17 12635450 12635554 -72802926 - L1 LINE L1 -2299 3847 3742 2463 63 0 3 chr17 12635554 12635853 -72802627 - AluY SINE Alu -13 298 1 3415 191 8 33 chr17 12635853 12636595 -72801885 - L1 LINE L1 -2404 3742 3022 244 88 0 0 chr17 12636618 12636652 -72801828 - L1 LINE L1 -1374 4772 4739 2482 159 66 15 chr17 12636666 12637138 -72801342 + L1PA16 LINE L1 5669 6164 -2 22 35 0 0 chr17 12637138 12637167 -72801313 + AT_rich Low_complexity Low_complexity 1 29 0 1610 213 49 62 chr17 12637172 12637684 -72800796 + MLT1D LTR MaLR 1 505 0 269 143 14 57 chr17 12637854 12637924 -72800556 - L1ME LINE L1 -233 5888 5822 366 304 118 29 chr17 12637992 12638374 -72800106 - L1ME LINE L1 -439 5682 5267 219 69 0 0 chr17 12638624 12638653 -72799827 + (CA)n Simple_repeat Simple_repeat 1 29 0 180 77 0 0 chr17 12638654 12638680 -72799800 + (TATATG)n Simple_repeat Simple_repeat 5 30 0 328 205 12 118 chr17 12638959 12639120 -72799360 - MIR SINE MIR -30 232 89 1790 144 35 78 chr17 12639281 12639318 -72799162 - L1MA9 LINE L1 -346 5945 5908 1985 130 40 0 chr17 12639318 12639617 -72798863 + AluSx SINE Alu 1 311 -1 1790 144 35 78 chr17 12639617 12639953 -72798527 - L1MA9 LINE L1 -383 5908 5588 1315 180 57 70 chr17 12639951 12640062 -72798418 + L1MA9 LINE L1 5946 6057 -255 * 2316 101 0 3 chr17 12640062 12640368 -72798112 + AluSx SINE Alu 1 305 -7 1315 180 57 70 chr17 12640368 12640628 -72797852 + L1MA9 LINE L1 6057 6312 0 213 94 0 0 chr17 12640814 12640846 -72797634 + (CA)n Simple_repeat Simple_repeat 1 32 0 305 224 12 118 chr17 12641120 12641281 -72797199 - MIR SINE MIR -30 232 89 644 238 136 88 chr17 12642136 12642409 -72796071 + MER69 DNA AcHobo 283 568 -658 * 1044 175 99 21 chr17 12642407 12642790 -72795690 + MER69 DNA AcHobo 2010 2522 -4 2028 140 0 10 chr17 12643374 12643682 -72794798 - AluSx SINE Alu -7 305 1 325 38 0 38 chr17 12644050 12644103 -72794377 + (TTTTG)n Simple_repeat Simple_repeat 2 52 0 610 211 6 75 chr17 12644451 12644612 -72793868 - L2 LINE L2 0 3313 3164 1773 234 57 7 chr17 12644623 12645146 -72793334 + HsTC2 DNA Tc2 2 591 -1307 861 125 21 0 chr17 12645146 12645290 -72793190 + L1MA9 LINE L1 6162 6308 -4 1150 153 129 0 chr17 12645899 12646108 -72792372 + MER46A DNA MER2_type 1 236 0 448 255 40 20 chr17 12647433 12647582 -72790898 - L2 LINE L2 0 3313 3162 195 296 0 0 chr17 12647627 12647681 -72790799 + MIR SINE MIR 139 192 -70 258 375 46 13 chr17 12647911 12648063 -72790417 + MLT1K LTR MaLR 166 322 -266 2132 155 32 34 chr17 12648093 12648652 -72789828 - MLT2A2 LTR ERVL 0 554 1 519 273 160 0 chr17 12648751 12648901 -72789579 - MIR SINE MIR -73 189 16 2004 133 10 0 chr17 12649624 12649918 -72788562 - AluSg SINE Alu -13 297 1 223 400 69 12 chr17 12651196 12651356 -72787124 - L2 LINE L2 -4 3268 3100 206 254 51 0 chr17 12652196 12652255 -72786225 + MER5A DNA MER1_type 128 189 0 735 235 9 50 chr17 12652396 12652596 -72785884 + L1MD2 LINE L1 5080 5266 -891 2229 99 0 13 chr17 12652596 12652900 -72785580 - AluSq SINE Alu -13 300 1 735 235 9 50 chr17 12652900 12652968 -72785512 + L1MD2 LINE L1 5266 5335 -822 1090 128 17 22 chr17 12652969 12653148 -72785332 + MLT1B LTR MaLR 1 178 -212 2106 108 20 7 chr17 12653148 12653453 -72785027 + AluSc SINE Alu 1 309 0 209 122 49 0 chr17 12653456 12653497 -72784983 + A-rich Low_complexity Low_complexity 3 45 0 435 145 12 0 chr17 12653546 12653629 -72784851 + MLT1B LTR MaLR 192 275 -115 660 164 35 0 chr17 12653665 12653781 -72784699 + MLT1B LTR MaLR 269 388 -2 3947 186 67 38 chr17 12653782 12654763 -72783717 + L1MD2 LINE L1 5331 6340 -19 2273 129 72 33 chr17 12655004 12655508 -72782972 + MLT2A2 LTR ERVL 1 547 -7 2274 89 3 32 chr17 12655574 12655889 -72782591 + AluSp SINE Alu 3 308 -5 453 228 32 3 chr17 12656232 12656346 -72782134 + L1MC/D LINE L1 5528 5643 -522 2223 108 3 3 chr17 12656394 12656700 -72781780 + AluSq SINE Alu 3 308 -5 1827 198 20 2 chr17 12658241 12658640 -72779840 - L1MB5 LINE L1 -9 6165 5760 278 307 33 39 chr17 12658746 12658899 -72779581 - L1M4 LINE L1 -6275 267 116 1085 269 45 8 chr17 12660951 12661352 -72777128 + L1ME2 LINE L1 2417 2832 -3314 426 279 32 19 chr17 12661391 12661545 -72776935 + AluJo SINE Alu 74 229 -83 183 129 0 0 chr17 12661545 12661576 -72776904 + (A)n Simple_repeat Simple_repeat 1 31 0 1583 274 89 52 chr17 12661576 12662581 -72775899 + L1ME2 LINE L1 2814 3855 -2291 246 228 0 0 chr17 12662893 12662950 -72775530 + L1 LINE L1 4255 4311 -1835 8653 173 11 17 chr17 12663263 12665536 -72772944 + L1PB3 LINE L1 3537 5789 -365 241 180 33 16 chr17 12665537 12665598 -72772882 + (TA)n Simple_repeat Simple_repeat 1 62 0 340 130 0 4 chr17 12665599 12665656 -72772824 - L1MB5 LINE L1 -374 5780 5735 261 0 0 0 chr17 12665684 12665713 -72772767 + (CA)n Simple_repeat Simple_repeat 1 29 0 2408 115 14 0 chr17 12665713 12666070 -72772410 + L1PB3 LINE L1 5793 6154 0 2211 255 71 1 chr17 12666076 12666755 -72771725 + L1ME2 LINE L1 3841 4566 -1580 21 0 0 0 chr17 12666885 12666906 -72771574 + AT_rich Low_complexity Low_complexity 1 21 0 305 233 0 58 chr17 12667056 12667142 -72771338 - L2 LINE L2 0 3313 3233 1663 230 53 13 chr17 12667414 12667888 -72770592 + L1ME2 LINE L1 5499 5991 -173 405 226 0 17 chr17 12667909 12668024 -72770456 + L1MA10 LINE L1 6220 6332 -2 42 0 0 0 chr17 12669378 12669420 -72769060 + AT_rich Low_complexity Low_complexity 1 42 0 2242 86 0 0 chr17 12669599 12669879 -72768601 + AluSg1 SINE Alu 21 300 -9 1696 94 123 7 chr17 12670244 12670520 -72767960 + AluSg1 SINE Alu 1 308 -1 241 299 176 25 chr17 12671153 12671397 -72767083 - L2 LINE L2 -525 2789 2509 1605 229 16 8 chr17 12671410 12671781 -72766699 - MLT1A2 LTR MaLR 0 374 1 195 69 0 0 chr17 12671789 12671818 -72766662 + (CA)n Simple_repeat Simple_repeat 2 30 0 503 355 65 48 chr17 12672320 12672839 -72765641 - L2 LINE L2 -23 3249 2738 448 202 183 47 chr17 12673144 12673357 -72765123 - MLT1K LTR MaLR -2 586 345 988 176 136 10 chr17 12673754 12673953 -72764527 - MER58A DNA MER1_type 0 224 1 2195 105 3 7 chr17 12675334 12675629 -72762851 + AluSx SINE Alu 1 294 -18 266 293 98 8 chr17 12676475 12676608 -72761872 + L2 LINE L2 2836 2980 -292 200 327 40 20 chr17 12676635 12676736 -72761744 + MIR SINE MIR 90 192 -70 415 145 66 0 chr17 12676897 12676973 -72761507 - L1MA9 LINE L1 -147 6165 6085 321 336 72 28 chr17 12677145 12677505 -72760975 + HAL1b LINE L1 399 774 -574 716 189 182 0 chr17 12678941 12679100 -72759380 + MER5A DNA MER1_type 1 188 -1 188 295 16 109 chr17 12679278 12679461 -72759019 + MIR3 SINE MIR 41 206 -2 311 272 35 58 chr17 12680168 12680341 -72758139 + L1MEd LINE L1 913 1081 -5038 329 284 28 8 chr17 12680428 12680598 -72757882 - L1MEc LINE L1 -3403 2812 2640 694 262 66 44 chr17 12680651 12681019 -72757461 - L1MEc LINE L1 -3708 2507 2172 264 310 25 30 chr17 12681030 12681230 -72757250 - L1MEc LINE L1 -4322 2074 1876 1801 146 0 0 chr17 12682559 12682834 -72755646 + MER57A LTR ERV1 1 275 -128 445 154 0 22 chr17 12682904 12682995 -72755485 + MER53 DNA DNA 98 186 -3 1240 198 83 22 chr17 12683355 12683718 -72754762 - MER3 DNA MER1_type 0 2624 2240 305 204 45 11 chr17 12683714 12683816 -72754664 - MER3 DNA MER1_type -86 123 81 * 2122 138 29 9 chr17 12684800 12685141 -72753339 - MER7A DNA MER2_type 0 346 1 362 292 21 0 chr17 12685543 12685639 -72752841 + MIR SINE MIR 57 154 -108 21 0 0 0 chr17 12685899 12685920 -72752560 + AT_rich Low_complexity Low_complexity 1 21 0 3092 199 73 34 chr17 12686688 12687819 -72750661 - L1MB7 LINE L1 0 6184 4977 1786 191 0 0 chr17 12687819 12688117 -72750363 - AluSx SINE Alu -14 298 1 3092 199 73 34 chr17 12688117 12688453 -72750027 - L1MB7 LINE L1 -1207 4977 4656 22 35 0 0 chr17 12688526 12688555 -72749925 + AT_rich Low_complexity Low_complexity 1 29 0 1452 40 51 0 chr17 12688727 12688904 -72749576 - AluY SINE Alu -5 306 121 2256 105 10 0 chr17 12689224 12689520 -72748960 - AluSp SINE Alu -14 299 1 274 327 97 14 chr17 12689533 12689750 -72748730 - L1ME LINE L1 -306 5847 5613 296 314 31 31 chr17 12689798 12690021 -72748459 - L1ME LINE L1 -3375 2754 2532 1773 135 66 3 chr17 12690148 12690437 -72748043 - AluSx SINE Alu -5 307 1 304 306 20 34 chr17 12690438 12690585 -72747895 - L1ME LINE L1 -3956 2173 2029 25 51 0 0 chr17 12690585 12690624 -72747856 + AT_rich Low_complexity Low_complexity 1 39 0 1662 265 131 16 chr17 12690624 12691420 -72747060 - L1ME3A LINE L1 -19 6545 5659 1108 206 56 28 chr17 12691526 12691985 -72746495 - MLT1E2 LTR MaLR -54 571 89 316 268 135 48 chr17 12692048 12692447 -72746033 - L1ME3A LINE L1 -968 5572 5139 403 297 115 21 chr17 12692528 12692955 -72745525 - L1ME3A LINE L1 -4531 2009 1543 379 308 57 63 chr17 12693162 12694233 -72744247 - L1MEd LINE L1 -860 1630 592 315 335 39 68 chr17 12694487 12694678 -72743802 - HAL1 LINE L1 -1129 1378 1196 2328 101 10 0 chr17 12694678 12694985 -72743495 - AluSx SINE Alu -2 310 1 315 335 39 68 chr17 12694985 12695074 -72743406 - HAL1 LINE L1 -1311 1196 1106 2229 78 14 10 chr17 12695406 12695702 -72742778 - AluSq SINE Alu -16 297 1 639 240 47 0 chr17 12696414 12696543 -72741937 + MLT1E LTR MaLR 1 135 -458 1462 251 60 48 chr17 12696602 12697065 -72741415 + MLT1E LTR MaLR 119 587 -6 2420 80 0 16 chr17 12697108 12697419 -72741061 + AluSc SINE Alu 3 308 -1 327 300 106 0 chr17 12697702 12697861 -72740619 - MIR SINE MIR -56 206 20 2164 98 0 36 chr17 12698391 12698697 -72739783 + AluSg SINE Alu 1 295 -15 445 209 76 9 chr17 12699007 12699112 -72739368 + MLT1E2 LTR MaLR 397 508 -118 3698 268 95 64 chr17 12699118 12700801 -72737679 - L2 LINE L2 -780 2534 800 2459 93 3 0 chr17 12701079 12701390 -72737090 - AluSx SINE Alu 0 312 1 309 105 250 13 chr17 12701445 12701521 -72736959 - L1ME2 LINE L1 -1 6163 6070 537 89 0 0 chr17 12701537 12701616 -72736864 - Alu SINE Alu 0 312 234 2779 224 74 33 chr17 12701620 12702170 -72736310 - L1ME2 LINE L1 -85 6079 5553 1304 190 42 48 chr17 12702170 12702506 -72735974 - AluJo SINE Alu 0 312 1 2779 224 74 33 chr17 12702506 12703257 -72735223 - L1ME2 LINE L1 -611 5553 4695 2465 81 0 7 chr17 12703257 12703564 -72734916 + AluSq SINE Alu 1 305 -8 2779 224 74 33 chr17 12703564 12703893 -72734587 - L1ME2 LINE L1 -1469 4695 4381 2152 173 46 0 chr17 12703894 12704263 -72734217 - MSTB LTR MaLR 0 426 41 2428 81 0 0 chr17 12704264 12704571 -72733909 + AluY SINE Alu 2 308 -3 1291 94 0 6 chr17 12704603 12704773 -72733707 + AluSc SINE Alu 125 293 -16 313 192 0 0 chr17 12704773 12704825 -72733655 - MSTB LTR MaLR -374 52 1 5818 213 115 50 chr17 12704835 12705451 -72733029 - L1MC3 LINE L1 -8 7777 7202 2380 88 3 0 chr17 12705451 12705748 -72732732 + AluSp SINE Alu 1 298 -15 5818 213 115 50 chr17 12705748 12706919 -72731561 - L1MC3 LINE L1 -583 7202 5874 232 195 0 0 chr17 12707486 12707527 -72730953 + LTR50 LTR ERVL 122 162 -633 278 256 83 8 chr17 12707976 12708097 -72730383 + LTR33A LTR ERVL 392 521 -2 2348 112 0 0 chr17 12708169 12708482 -72729998 + AluSq SINE Alu 1 313 0 305 181 32 85 chr17 12709025 12709119 -72729361 - MIR SINE MIR -113 149 61 426 239 246 7 chr17 12710141 12710283 -72728197 + MER5B DNA MER1_type 1 176 -2 257 182 15 76 chr17 12710283 12710338 -72728142 - MIR3 SINE MIR -50 158 108 236 277 96 0 chr17 12710758 12710852 -72727628 - MER94 DNA DNA -31 103 1 300 234 129 16 chr17 12711659 12711783 -72726697 + MIR SINE MIR 66 203 -59 531 204 54 54 chr17 12712439 12712586 -72725894 + MIR SINE MIR 51 197 -65 449 299 68 7 chr17 12713334 12713481 -72724999 + MIR3 SINE MIR 7 162 -46 420 265 75 20 chr17 12713514 12713661 -72724819 + MIR SINE MIR 35 189 -73 480 179 0 63 chr17 12713947 12714042 -72724438 - MER58C DNA MER1_type 0 215 127 323 263 90 8 chr17 12714158 12714291 -72724189 - MLT1J2 LTR MaLR -44 406 263 446 257 0 0 chr17 12714322 12714427 -72724053 - MER58C DNA MER1_type -110 105 1 1554 206 124 33 chr17 12714656 12714723 -72723757 - MLT1C LTR MaLR 0 467 408 2399 59 0 0 chr17 12714723 12715012 -72723468 + AluY SINE Alu 1 289 -22 1554 206 124 33 chr17 12715012 12715372 -72723108 - MLT1C LTR MaLR -59 408 1 215 336 29 7 chr17 12716230 12716367 -72722113 - L2 LINE L2 -1651 1663 1524 536 266 0 28 chr17 12716500 12716643 -72721837 + MIR SINE MIR 92 230 -32 209 160 0 40 chr17 12716829 12716879 -72721601 + (CAT)n Simple_repeat Simple_repeat 3 50 0 286 321 104 8 chr17 12718112 12718246 -72720234 - MLT1J2 LTR MaLR -55 395 249 347 283 113 0 chr17 12718327 12718433 -72720047 - MLT1J2 LTR MaLR -332 118 1 659 240 87 15 chr17 12718956 12719152 -72719328 - MIR SINE MIR -2 260 51 1399 261 40 29 chr17 12719808 12720260 -72718220 - L1MDa LINE L1 -1994 4546 4090 1930 161 3 16 chr17 12720260 12720571 -72717909 - AluJb SINE Alu -5 307 1 914 149 0 6 chr17 12720585 12720753 -72717727 + (TTCC)n Simple_repeat Simple_repeat 1 167 0 3512 232 74 39 chr17 12720753 12722151 -72716329 - L1MDa LINE L1 -2452 4088 2642 6652 85 13 0 chr17 12722187 12723324 -72715156 - L1PB1 LINE L1 0 6151 5004 2594 223 92 55 chr17 12723368 12724559 -72713921 - L1MDa LINE L1 -3894 2646 1412 2821 237 25 15 chr17 12724577 12725412 -72713068 + L1M4 LINE L1 4573 5420 -743 2412 74 0 0 chr17 12726043 12726341 -72712139 + AluY SINE Alu 1 298 -13 520 240 161 65 chr17 12726484 12726701 -72711779 + MIR SINE MIR 11 248 -14 302 341 79 64 chr17 12727223 12727490 -72710990 - L2 LINE L2 -2844 470 200 306 311 88 37 chr17 12728215 12728488 -72709992 - L1MDa LINE L1 -5767 763 477 364 248 67 0 chr17 12730717 12730822 -72707658 + MIR SINE MIR 37 148 -114 465 138 53 32 chr17 12730855 12730913 -72707567 - MER53 DNA DNA 0 189 127 2397 93 0 3 chr17 12730913 12731226 -72707254 - AluSq SINE Alu -1 312 1 465 138 53 32 chr17 12731226 12731261 -72707219 - MER53 DNA DNA -62 127 94 875 264 67 57 chr17 12731778 12731984 -72706496 - L1ME4a LINE L1 -1 6120 5917 2396 88 0 0 chr17 12731984 12732281 -72706199 - AluSc SINE Alu -12 297 1 875 264 67 57 chr17 12732281 12732487 -72705993 - L1ME4a LINE L1 -204 5917 5700 2694 35 0 7 chr17 12732487 12732797 -72705683 + AluY SINE Alu 1 308 -3 875 264 67 57 chr17 12732797 12732894 -72705586 - L1ME4a LINE L1 -421 5700 5605 5059 118 18 3 chr17 12732907 12733635 -72704845 - L1MA2 LINE L1 -5 6299 5561 490 241 30 106 chr17 12733652 12733889 -72704591 - MIR SINE MIR -7 255 37 268 311 109 0 chr17 12734137 12734256 -72704224 - MIR SINE MIR -98 164 33 226 232 0 18 chr17 12734524 12734580 -72703900 + (CATA)n Simple_repeat Simple_repeat 3 57 0 323 342 117 23 chr17 12734958 12735353 -72703127 - L1ME4a LINE L1 -1316 4830 4399 230 329 77 31 chr17 12735895 12736117 -72702363 - L1ME4a LINE L1 -2339 3807 3576 894 350 76 35 chr17 12736126 12737321 -72701159 - L1ME4a LINE L1 -2591 3555 2312 201 359 8 0 chr17 12737392 12737509 -72700971 + MIR SINE MIR 132 249 -13 2262 85 0 3 chr17 12737544 12737826 -72700654 - AluSx SINE Alu -14 298 18 182 278 264 0 chr17 12737993 12738065 -72700415 - L2 LINE L2 -43 3270 3180 607 283 36 0 chr17 12738468 12738634 -72699846 - MER20 DNA MER1_type 0 219 48 2085 212 79 0 chr17 12738636 12739127 -72699353 + MER74A LTR ERVL 2 531 -27 2232 96 0 0 chr17 12739145 12739457 -72699023 - AluSc SINE Alu 0 312 1 186 305 12 73 chr17 12739522 12739604 -72698876 - MER5A DNA MER1_type -105 84 8 268 345 220 11 chr17 12739981 12740158 -72698322 + L2 LINE L2 3059 3272 0 192 152 0 0 chr17 12740736 12740769 -72697711 + T-rich Low_complexity Low_complexity 1 33 0 211 284 0 42 chr17 12741598 12741693 -72696787 + CT-rich Low_complexity Low_complexity 3 93 0 1864 198 118 82 chr17 12742071 12742790 -72695690 + LTR1B LTR ERV1 1 745 -81 558 178 17 106 chr17 12743275 12743455 -72695025 - L1MA10 LINE L1 -3 6331 6168 1536 189 60 0 chr17 12743459 12743760 -72694720 - L1MC1 LINE L1 0 6333 6015 289 316 53 27 chr17 12744214 12744401 -72694079 + L2 LINE L2 2845 3036 -277 834 247 46 0 chr17 12744475 12744669 -72693811 - MER3 DNA MER1_type -1 208 6 2229 115 3 0 chr17 12746782 12747077 -72691403 + AluSp SINE Alu 1 296 -17 725 212 34 50 chr17 12747198 12747377 -72691103 + FRAM SINE Alu 1 40 0 2341 60 0 7 chr17 12747382 12747687 -72690793 + AluY SINE Alu 1 303 0 637 249 56 60 chr17 12748199 12748468 -72690012 + L2 LINE L2 3046 3313 0 469 130 0 0 chr17 12748889 12748966 -72689514 + L1P4 LINE L1 5456 5532 -631 206 116 23 0 chr17 12749247 12749290 -72689190 + GA-rich Low_complexity Low_complexity 2 45 0 2197 95 20 0 chr17 12749356 12749651 -72688829 + AluSg SINE Alu 1 301 -9 752 332 100 0 chr17 12749789 12750129 -72688351 - MLT1I LTR MaLR 0 409 36 513 323 156 23 chr17 12750248 12750521 -72687959 - L2 LINE L2 -803 2511 2276 470 278 37 0 chr17 12750521 12750629 -72687851 - MER81 DNA DNA -1 113 2 513 323 156 23 chr17 12750629 12750876 -72687604 - L2 LINE L2 -1038 2276 1922 8694 196 65 69 chr17 12751357 12752386 -72686094 - L1 LINE L1 -830 5316 4284 225 0 0 0 chr17 12752386 12752411 -72686069 + (TG)n Simple_repeat Simple_repeat 2 26 0 8694 196 65 69 chr17 12752411 12753028 -72685452 - L1 LINE L1 -1862 4284 3666 180 0 0 0 chr17 12753028 12753048 -72685432 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 8694 196 65 69 chr17 12753048 12753286 -72685194 - L1 LINE L1 -2480 3666 3429 2568 50 0 0 chr17 12753286 12753587 -72684893 - AluYa5 SINE Alu -9 302 2 8694 196 65 69 chr17 12753587 12753920 -72684560 - L1 LINE L1 -2717 3429 3096 186 43 0 0 chr17 12753920 12753943 -72684537 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 8694 196 65 69 chr17 12753943 12754374 -72684106 - L1 LINE L1 -3050 3096 2676 297 216 0 0 chr17 12754377 12754428 -72684052 + Tigger1 DNA MER2_type 2368 2418 0 3469 185 86 31 chr17 12754429 12755339 -72683141 - L1MDa LINE L1 -4318 2222 1263 2187 102 0 7 chr17 12755348 12755642 -72682838 - AluSx SINE Alu -7 305 14 2031 262 65 68 chr17 12755680 12755985 -72682495 - L1MDa LINE L1 -5445 1095 790 2392 94 3 0 chr17 12755985 12756283 -72682197 - AluSp SINE Alu -14 299 1 2031 262 65 68 chr17 12756283 12756890 -72681590 - L1MDa LINE L1 -5750 790 22 23 68 0 0 chr17 12757062 12757106 -72681374 + AT_rich Low_complexity Low_complexity 1 44 0 819 301 68 51 chr17 12757181 12758023 -72680457 + L1ME4a LINE L1 5265 6120 -1 523 318 73 17 chr17 12758057 12758290 -72680190 - MLT1L LTR MaLR -129 486 241 403 295 29 43 chr17 12758838 12759045 -72679435 + MIR3 SINE MIR 3 206 -2 454 232 43 29 chr17 12759531 12759669 -72678811 + MIR SINE MIR 50 189 -73 366 317 72 41 chr17 12760227 12760646 -72677834 + L1MC/D LINE L1 4881 5312 -834 23 0 0 0 chr17 12760693 12760716 -72677764 + AT_rich Low_complexity Low_complexity 1 23 0 307 330 76 39 chr17 12760765 12760888 -72677592 + L1MC/D LINE L1 5442 5559 -2249 2296 110 0 0 chr17 12760888 12761196 -72677284 + AluSq SINE Alu 1 308 -5 307 330 76 39 chr17 12761196 12761427 -72677053 + L1MC/D LINE L1 5559 5809 -1999 1183 219 76 17 chr17 12761600 12761902 -72676578 + L1MD3 LINE L1 7640 7959 -36 2523 69 0 3 chr17 12761932 12762235 -72676245 + AluSx SINE Alu 1 302 -10 258 239 0 28 chr17 12763379 12763450 -72675030 - L1MD3 LINE L1 -76 7919 7851 249 287 67 62 chr17 12763669 12763878 -72674602 - L2 LINE L2 -337 2977 2768 1994 187 23 41 chr17 12763885 12764046 -72674434 + MLT1B LTR MaLR 1 163 -227 2259 100 3 7 chr17 12764046 12764346 -72674134 - AluSx SINE Alu -13 299 1 1994 187 23 41 chr17 12764346 12764575 -72673905 + MLT1B LTR MaLR 163 384 -6 258 365 19 9 chr17 12764740 12764800 -72673680 + MER91C DNA MER1_type 5 63 -77 16261 125 14 24 chr17 12764800 12764981 -72673499 - Tigger1 DNA MER2_type 0 2418 2237 2215 108 3 0 chr17 12764981 12765278 -72673202 + AluSx SINE Alu 1 298 -14 16261 125 14 24 chr17 12765278 12766544 -72671936 - Tigger1 DNA MER2_type -181 2237 960 2214 91 7 0 chr17 12766544 12766873 -72671607 - AluSp SINE Alu 0 331 1 16261 125 14 24 chr17 12766873 12767629 -72670851 - Tigger1 DNA MER2_type -1458 960 236 2382 90 0 3 chr17 12767629 12767928 -72670552 + AluSg SINE Alu 1 298 -12 16261 125 14 24 chr17 12767928 12768161 -72670319 - Tigger1 DNA MER2_type -2182 236 2 258 365 19 9 chr17 12768161 12768207 -72670273 + MER91C DNA MER1_type 63 112 -28 281 353 55 35 chr17 12768253 12768542 -72669938 - L2 LINE L2 -741 2573 2279 2162 134 0 7 chr17 12768664 12768993 -72669487 + AluSx SINE Alu 1 312 0 213 283 75 0 chr17 12769187 12769240 -72669240 - L2 LINE L2 -2 3311 3255 368 225 297 7 chr17 12771349 12771487 -72666993 - MER5A DNA MER1_type 0 189 12 440 291 77 39 chr17 12771883 12772065 -72666415 + MIR3 SINE MIR 15 203 -5 330 235 34 141 chr17 12772188 12772377 -72666103 + MIR SINE MIR 8 169 -93 573 221 9 0 chr17 12772377 12772490 -72665990 + MER81 DNA DNA 1 114 0 330 235 34 141 chr17 12772490 12772534 -72665946 + MIR SINE MIR 169 216 -46 2371 74 3 0 chr17 12772597 12772882 -72665598 - AluSp SINE Alu -15 298 13 495 260 31 0 chr17 12773684 12773811 -72664669 - MER94 DNA DNA -3 131 1 193 220 40 0 chr17 12774640 12774690 -72663790 + L3 LINE CR1 1524 1575 -2 422 326 56 69 chr17 12775902 12776135 -72662345 + L2 LINE L2 3024 3253 -19 180 0 0 0 chr17 12776843 12776863 -72661617 + (TTTA)n Simple_repeat Simple_repeat 3 22 0 6908 79 44 0 chr17 12776868 12778012 -72660468 - L1PA8A LINE L1 -13 6118 4955 2012 191 17 0 chr17 12778012 12778357 -72660123 - MER82 DNA MER2_type -302 351 1 708 197 77 11 chr17 12778357 12778540 -72659940 + L1MC5 LINE L1 7732 7926 -35 315 0 0 0 chr17 12779373 12779408 -72659072 + (TG)n Simple_repeat Simple_repeat 2 36 0 186 404 0 0 chr17 12779635 12779739 -72658741 - MIR SINE MIR 0 262 159 3586 151 76 0 chr17 12780031 12780668 -72657812 - L1MC3 LINE L1 -14 7771 5609 373 263 0 0 chr17 12780677 12780757 -72657723 + L2 LINE L2 3234 3313 0 772 166 47 64 chr17 12781824 12782059 -72656421 - Charlie5 DNA MER1_type -29 2583 2353 667 239 13 0 chr17 12782062 12782217 -72656263 - Charlie5 DNA MER1_type -2416 196 40 403 288 63 21 chr17 12782226 12782417 -72656063 - L2 LINE L2 -198 3115 2917 2764 155 34 8 chr17 12783494 12783965 -72654515 + L1MA8 LINE L1 5799 6281 -10 1185 123 0 0 chr17 12784161 12784331 -72654149 + AluSg/x SINE Alu 127 296 -16 584 105 0 11 chr17 12784331 12784426 -72654054 + (GGGGA)n Simple_repeat Simple_repeat 3 96 0 238 313 188 10 chr17 12784861 12785069 -72653411 + L3 LINE CR1 1310 1554 -23 2199 115 0 13 chr17 12785240 12785552 -72652928 - AluSx SINE Alu -4 308 1 1612 173 39 3 chr17 12785720 12786004 -72652476 - AluJo SINE Alu -18 294 1 2214 98 14 0 chr17 12786248 12786545 -72651935 - AluSp SINE Alu -12 301 1 799 254 96 96 chr17 12787906 12788304 -72650176 - MLT1J LTR MaLR -2 509 112 2208 126 7 0 chr17 12788534 12788843 -72649637 + AluSx SINE Alu 1 311 -1 2347 82 10 0 chr17 12791312 12791615 -72646865 + AluSp SINE Alu 1 306 -7 885 261 68 5 chr17 12791619 12791841 -72646639 - MIR SINE MIR -21 241 6 542 260 64 64 chr17 12792749 12792968 -72645512 + LTR16A LTR ERVL 61 279 -171 931 175 58 153 chr17 12792969 12793130 -72645350 - MER96B DNA MER1_type? 0 417 242 2218 97 0 0 chr17 12793130 12793409 -72645071 - AluSc SINE Alu -29 280 2 931 175 58 153 chr17 12793409 12793431 -72645049 - MER96B DNA MER1_type? -175 242 220 1481 185 3 60 chr17 12793431 12793733 -72644747 + AluJo SINE Alu 5 289 -23 931 175 58 153 chr17 12793733 12793994 -72644486 - MER96B DNA MER1_type? -197 220 14 278 313 18 37 chr17 12794008 12794171 -72644309 + LTR16A1 LTR ERVL 298 457 0 228 336 71 71 chr17 12794215 12794426 -72644054 + MIR SINE MIR 48 258 -4 6665 88 17 0 chr17 12795340 12796311 -72642169 - L1PA13 LINE L1 0 6163 5170 411 113 0 0 chr17 12796805 12796867 -72641613 + (TTCTCC)n Simple_repeat Simple_repeat 4 65 0 1681 162 4 0 chr17 12796867 12797205 -72641275 - AluSx SINE Alu 0 445 45 616 214 81 35 chr17 12797311 12797484 -72640996 - MIR SINE MIR -66 196 16 452 274 32 16 chr17 12797948 12798072 -72640408 - MIR3 SINE MIR -48 160 35 245 193 70 0 chr17 12798348 12798405 -72640075 + MIR SINE MIR 81 141 -121 494 175 68 10 chr17 12799023 12799126 -72639354 - MIR3 SINE MIR -48 160 52 2469 132 5 70 chr17 12800137 12800554 -72637926 - MLT1B LTR MaLR 0 390 1 904 202 14 69 chr17 12800668 12800886 -72637594 + MER63A DNA MER1_type 1 206 -4 339 233 91 62 chr17 12801530 12801706 -72636774 + HAL1 LINE L1 1208 1388 -1119 324 376 49 0 chr17 12802243 12802448 -72636032 + L2 LINE L2 2525 2739 -575 2285 75 0 7 chr17 12802604 12802885 -72635595 - AluSc SINE Alu -14 295 17 449 275 16 28 chr17 12803125 12803307 -72635173 - MER104 DNA MER2_type 0 180 1 317 330 104 0 chr17 12803330 12803445 -72635035 - L2 LINE L2 -5 3308 3182 191 296 67 89 chr17 12803459 12803594 -72634886 + L2 LINE L2 3141 3272 0 6162 41 0 0 chr17 12804367 12805229 -72633251 + L1PA5 LINE L1 5236 6154 0 577 232 58 0 chr17 12805730 12805868 -72632612 - MLT1A1 LTR MaLR -77 288 143 344 284 101 0 chr17 12805868 12805977 -72632503 - MIR SINE MIR -71 137 18 2347 99 0 0 chr17 12807211 12807514 -72630966 - AluY SINE Alu 0 311 9 284 298 93 40 chr17 12807904 12808055 -72630425 + MIR SINE MIR 85 243 -19 2280 97 3 0 chr17 12808337 12808635 -72629845 - AluSq SINE Alu -14 299 1 212 250 0 0 chr17 12808854 12808898 -72629582 + MIR3 SINE MIR 117 160 -48 376 339 205 7 chr17 12808913 12809323 -72629157 - L2 LINE L2 -10 3303 2813 438 284 23 51 chr17 12809548 12809763 -72628717 - LTR33 LTR ERVL -294 227 19 637 312 35 9 chr17 12809806 12810037 -72628443 - L2 LINE L2 -541 2773 2537 243 96 0 0 chr17 12811056 12811108 -72627372 - LTR66 LTR ERVL -165 445 394 309 211 22 33 chr17 12811132 12811222 -72627258 + L1MC4 LINE L1 6616 6704 -1338 462 31 132 0 chr17 12811239 12811398 -72627082 + (TA)n Simple_repeat Simple_repeat 1 180 0 436 24 100 41 chr17 12811412 12811582 -72626898 + (TA)n Simple_repeat Simple_repeat 1 180 0 42 36 0 0 chr17 12811582 12811638 -72626842 + AT_rich Low_complexity Low_complexity 1 56 0 424 34 134 0 chr17 12811638 12811787 -72626693 + (TA)n Simple_repeat Simple_repeat 2 170 0 444 282 67 7 chr17 12812252 12812401 -72626079 + MIR SINE MIR 105 262 0 351 167 0 0 chr17 12813160 12813226 -72625254 + (CAT)n Simple_repeat Simple_repeat 1 66 0 720 267 51 51 chr17 12813232 12813468 -72625012 - MIR SINE MIR -12 250 15 4400 29 8 0 chr17 12814239 12814759 -72623721 - L1P LINE L1 -855 5291 4768 4280 11 0 0 chr17 12814752 12815225 -72623255 + L1HS LINE L1 5682 6154 -1 * 910 256 160 0 chr17 12816600 12816838 -72621642 + AluYa8 SINE Alu 3 278 -32 485 35 35 35 chr17 12816838 12816923 -72621557 + (TAAAA)n Simple_repeat Simple_repeat 1 85 0 2138 112 16 3 chr17 12816962 12817317 -72621163 + AluSq SINE Alu 1 359 0 524 346 41 68 chr17 12817317 12817981 -72620499 - L2 LINE L2 -438 2876 2231 265 304 112 0 chr17 12818870 12818995 -72619485 + L2 LINE L2 3170 3308 -5 469 256 44 0 chr17 12819396 12819533 -72618947 + MER69 DNA AcHobo 2384 2526 0 2382 101 0 0 chr17 12819580 12819887 -72618593 - AluSg SINE Alu -3 307 1 404 299 51 43 chr17 12819901 12820135 -72618345 + MER102a DNA MER1_type 92 327 -3 2054 131 19 25 chr17 12820213 12820400 -72618080 - AluJb SINE Alu 0 312 126 402 21 0 0 chr17 12820400 12820447 -72618033 + (TG)n Simple_repeat Simple_repeat 2 48 0 2054 131 19 25 chr17 12820447 12820573 -72617907 - AluJb SINE Alu -186 126 1 1207 169 86 12 chr17 12821004 12821247 -72617233 + MLT1E1 LTR MaLR 1 261 -393 2294 95 7 0 chr17 12821255 12821560 -72616920 + AluSp SINE Alu 1 307 -6 1172 213 17 9 chr17 12821601 12821831 -72616649 + MLT1E1 LTR MaLR 405 636 -18 1982 131 6 22 chr17 12821957 12822271 -72616209 + AluSx SINE Alu 1 309 -3 296 326 35 21 chr17 12822280 12822421 -72616059 - MIR SINE MIR -42 220 78 448 81 27 0 chr17 12822896 12822970 -72615510 + (CA)n Simple_repeat Simple_repeat 2 77 0 1769 208 66 37 chr17 12823412 12823894 -72614586 + MLT1D LTR MaLR 7 502 -3 216 308 15 0 chr17 12827653 12827718 -72610762 + CT-rich Low_complexity Low_complexity 1 66 0 558 235 111 51 chr17 12828083 12828317 -72610163 + MIR SINE MIR 15 262 0 261 281 97 0 chr17 12828328 12828442 -72610038 + MIR3 SINE MIR 81 205 -3 469 179 234 7 chr17 12828895 12829040 -72609440 + MER53 DNA DNA 12 189 0 1964 63 0 0 chr17 12829057 12829294 -72609186 - AluY SINE Alu -8 303 67 209 385 0 0 chr17 12830097 12830201 -72608279 + MIR3 SINE MIR 98 201 -7 348 243 146 73 chr17 12830416 12830622 -72607858 + L2 LINE L2 3045 3265 -48 220 200 0 0 chr17 12830657 12830702 -72607778 + L2 LINE L2 3265 3309 -4 214 143 0 0 chr17 12831531 12831566 -72606914 + MIR SINE MIR 110 144 -64 356 314 57 33 chr17 12832821 12833066 -72605414 - L1ME4a LINE L1 -188 5933 5683 338 198 198 0 chr17 12833524 12833610 -72604870 - MIR SINE MIR -64 198 96 207 300 0 0 chr17 12834060 12834110 -72604370 + (TATATG)n Simple_repeat Simple_repeat 3 52 0 404 308 93 31 chr17 12834164 12834485 -72603995 + L1MC4a LINE L1 4910 5250 -896 231 274 101 16 chr17 12834531 12834731 -72603749 + L1MC4a LINE L1 5327 5542 -579 301 276 20 66 chr17 12834793 12834945 -72603535 + L1MC4a LINE L1 5722 5866 -1942 2079 96 0 4 chr17 12835019 12835299 -72603181 + AluY SINE Alu 1 279 -32 243 0 0 0 chr17 12835299 12835326 -72603154 + (CAAT)n Simple_repeat Simple_repeat 4 30 0 447 19 0 0 chr17 12835684 12835736 -72602744 + (CA)n Simple_repeat Simple_repeat 1 52 0 371 181 101 94 chr17 12835839 12835988 -72602492 + L1ME4a LINE L1 5954 6103 -18 373 326 27 45 chr17 12836243 12836464 -72602016 + MIR SINE MIR 42 258 -4 3012 66 14 0 chr17 12836502 12836865 -72601615 + L1PA12 LINE L1 5801 6168 0 2480 65 0 0 chr17 12836873 12837166 -72601314 + AluY SINE Alu 1 293 -18 2425 82 0 0 chr17 12837328 12837633 -72600847 - AluSc SINE Alu -4 305 1 1745 97 0 9 chr17 12838094 12838380 -72600100 - AluY SINE Alu 0 343 60 276 259 62 12 chr17 12838414 12838495 -72599985 - MIR SINE MIR -66 142 58 29 0 0 0 chr17 12838641 12838670 -72599810 + AT_rich Low_complexity Low_complexity 1 29 0 211 175 16 16 chr17 12838982 12839045 -72599435 + (TA)n Simple_repeat Simple_repeat 2 64 0 363 270 121 66 chr17 12839184 12839473 -72599007 + L1ME4a LINE L1 5813 6117 -4 369 271 71 27 chr17 12839750 12839913 -72598567 - MIR SINE MIR -67 141 19 598 296 15 29 chr17 12840398 12840604 -72597876 - MIR SINE MIR -58 204 2 228 167 0 0 chr17 12842908 12842956 -72595524 + CT-rich Low_complexity Low_complexity 2 49 0 222 150 0 0 chr17 12842994 12843034 -72595446 + (CA)n Simple_repeat Simple_repeat 1 40 0 495 353 6 18 chr17 12843166 12843328 -72595152 + L2 LINE L2 3096 3256 -12 212 83 0 28 chr17 12843328 12843364 -72595116 + (TGAA)n Simple_repeat Simple_repeat 1 35 0 231 88 0 0 chr17 12843527 12843561 -72594919 + (TC)n Simple_repeat Simple_repeat 1 34 0 741 222 11 72 chr17 12843928 12844007 -72594473 - MER45A DNA AcHobo -1412 169 87 2201 120 0 3 chr17 12844007 12844308 -72594172 + AluSg SINE Alu 1 300 -10 741 222 11 72 chr17 12844308 12844408 -72594072 - MER45A DNA AcHobo -1494 87 1 1820 170 0 13 chr17 12844456 12844756 -72593724 + AluSx SINE Alu 1 296 -16 2151 104 7 7 chr17 12844765 12845064 -72593416 + AluSx SINE Alu 1 299 -13 435 236 155 35 chr17 12845665 12845839 -72592641 - MIR3 SINE MIR -12 196 2 194 295 13 64 chr17 12846676 12846754 -72591726 - MIR3 SINE MIR -39 169 96 21 0 0 0 chr17 12847069 12847090 -72591390 + AT_rich Low_complexity Low_complexity 1 21 0 391 72 62 31 chr17 12847869 12847966 -72590514 + CT-rich Low_complexity Low_complexity 1 100 0 776 91 8 54 chr17 12847972 12848216 -72590264 + (TTCC)n Simple_repeat Simple_repeat 1 232 0 227 245 0 61 chr17 12848478 12848576 -72589904 + T-rich Low_complexity Low_complexity 5 96 0 2227 94 3 0 chr17 12848992 12849278 -72589202 + AluSx SINE Alu 1 287 -25 351 292 112 62 chr17 12849573 12849878 -72588602 + L1ME LINE L1 5255 5574 -2234 291 294 54 29 chr17 12850098 12850240 -72588240 + MER5A DNA MER1_type 27 172 -6 247 351 18 18 chr17 12850245 12850356 -72588124 - MIR3 SINE MIR -44 164 54 224 240 93 0 chr17 12851309 12851384 -72587096 + MIR SINE MIR 142 223 -39 2030 128 0 0 chr17 12852770 12853128 -72585352 + AluSx SINE Alu 1 358 0 542 280 76 15 chr17 12854061 12854325 -72584155 + L1ME LINE L1 5510 5789 -332 207 100 0 0 chr17 12854325 12854355 -72584125 + (A)n Simple_repeat Simple_repeat 1 30 0 1904 185 40 8 chr17 12854553 12854905 -72583575 - MLT1A1 LTR MaLR -2 363 1 2065 126 90 0 chr17 12855134 12855490 -72582990 - L1MB3 LINE L1 0 6183 5796 234 0 0 0 chr17 12855491 12855517 -72582963 + (TTG)n Simple_repeat Simple_repeat 2 27 0 553 92 0 4 chr17 12855519 12855720 -72582760 - AluSc SINE Alu -31 278 1 1919 186 14 0 chr17 12855720 12856069 -72582411 - L1MB3 LINE L1 -386 5797 5444 225 0 0 0 chr17 12856778 12856803 -72581677 + (TA)n Simple_repeat Simple_repeat 2 26 0 2248 76 38 3 chr17 12856803 12857094 -72581386 - AluY SINE Alu -10 301 1 289 289 107 0 chr17 12857900 12858021 -72580459 + L2 LINE L2 3179 3312 -1 2745 39 0 0 chr17 12858173 12858484 -72579996 - AluY SINE Alu 0 311 1 2042 119 7 0 chr17 12858580 12858866 -72579614 - AluSx SINE Alu -24 288 1 197 333 42 28 chr17 12858933 12859077 -72579403 + L2 LINE L2 2226 2371 -943 2294 95 3 19 chr17 12859336 12859651 -72578829 - AluSg SINE Alu 0 310 1 2401 66 0 13 chr17 12859842 12860144 -72578336 - AluY SINE Alu -1 310 13 3700 242 83 92 chr17 12860387 12860606 -72577874 - L1ME LINE L1 -2669 3411 3191 1917 105 0 0 chr17 12860606 12860885 -72577595 + AluSx SINE Alu 35 313 0 3700 242 83 92 chr17 12860885 12863674 -72574806 - L1ME LINE L1 -2889 3191 494 21 36 0 0 chr17 12863794 12863822 -72574658 + AT_rich Low_complexity Low_complexity 1 28 0 732 263 45 31 chr17 12863999 12864223 -72574257 - MIR SINE MIR -1 261 35 241 325 72 12 chr17 12864675 12864758 -72573722 - L3b LINE CR1 -7 1576 1489 214 301 12 48 chr17 12866726 12866809 -72571671 - L2 LINE L2 -8 3264 3185 2238 70 0 36 chr17 12866866 12867194 -72571286 + AluY SINE Alu 1 311 0 198 209 0 0 chr17 12867390 12867433 -72571047 + (TA)n Simple_repeat Simple_repeat 1 43 0 2320 79 7 0 chr17 12867841 12868133 -72570347 - AluY SINE Alu -17 294 1 210 303 30 0 chr17 12868249 12868315 -72570165 - MIR3 SINE MIR -134 74 7 192 368 132 0 chr17 12869430 12869536 -72568944 - L2 LINE L2 -9 3263 3144 21 0 0 0 chr17 12870623 12870644 -72567836 + AT_rich Low_complexity Low_complexity 1 21 0 248 294 55 46 chr17 12870700 12870809 -72567671 - MIR SINE MIR -118 144 35 602 177 53 0 chr17 12871238 12871351 -72567129 - MER5A DNA MER1_type 0 189 71 808 92 0 0 chr17 12871356 12871465 -72567015 - AluY SINE Alu -2 309 201 * 1154 86 0 0 chr17 12871464 12871603 -72566877 - AluSg1 SINE Alu -170 139 1 303 224 45 0 chr17 12871604 12871671 -72566809 - MER5A DNA MER1_type -114 75 6 351 0 0 0 chr17 12873766 12873805 -72564675 + (CA)n Simple_repeat Simple_repeat 1 39 0 359 294 49 25 chr17 12874281 12874444 -72564036 + MIR3 SINE MIR 42 208 0 1915 142 22 38 chr17 12876141 12876458 -72562022 + AluJb SINE Alu 1 312 0 265 244 163 0 chr17 12877049 12877135 -72561345 + MIR SINE MIR 13 113 -95 339 293 97 63 chr17 12877541 12877872 -72560608 - L2 LINE L2 0 3272 2931 2421 93 0 3 chr17 12878334 12878647 -72559833 + AluSx SINE Alu 1 312 0 966 246 69 4 chr17 12878715 12878975 -72559505 + L1ME LINE L1 5519 5795 -326 1705 224 50 87 chr17 12878982 12879013 -72559467 + LTR9 LTR ERV1 1 32 -580 2489 50 0 47 chr17 12879013 12879331 -72559149 + AluSx SINE Alu 1 303 -9 1705 224 50 87 chr17 12879331 12879934 -72558546 + LTR9 LTR ERV1 32 612 0 235 307 50 10 chr17 12879934 12880035 -72558445 + L1ME LINE L1 5799 5903 -218 2589 53 0 3 chr17 12880182 12880486 -72557994 + AluY SINE Alu 1 303 -8 185 191 0 64 chr17 12881902 12881949 -72556531 - L2 LINE L2 -11 3261 3218 21 0 0 0 chr17 12883667 12883688 -72554792 + AT_rich Low_complexity Low_complexity 1 21 0 334 316 76 33 chr17 12883931 12884206 -72554274 - L1M4 LINE L1 -924 5222 4936 288 269 61 35 chr17 12884325 12884522 -72553958 - L1M4 LINE L1 -1501 4645 4444 24 85 0 0 chr17 12884732 12884791 -72553689 + AT_rich Low_complexity Low_complexity 1 59 0 257 173 58 40 chr17 12884811 12885032 -72553448 + (TA)n Simple_repeat Simple_repeat 1 224 0 215 139 14 42 chr17 12885096 12885168 -72553312 + (TTATA)n Simple_repeat Simple_repeat 4 73 0 286 291 164 8 chr17 12885263 12885507 -72552973 - L1M4 LINE L1 -2150 3996 3715 315 258 115 60 chr17 12885507 12885658 -72552822 - MLT1J2 LTR MaLR -2 448 307 890 203 156 0 chr17 12885658 12885850 -72552630 - MER58A DNA MER1_type -2 222 1 315 258 115 60 chr17 12885850 12885996 -72552484 - MLT1J2 LTR MaLR -143 307 101 2350 99 3 0 chr17 12887918 12888221 -72550259 - AluSp SINE Alu -9 304 1 1837 83 25 8 chr17 12889024 12889265 -72549215 - AluSg SINE Alu -18 292 48 1426 164 0 0 chr17 12889388 12889608 -72548872 + AluJo SINE Alu 82 301 -11 2207 101 13 7 chr17 12889608 12889906 -72548574 + AluSq SINE Alu 1 300 -13 713 292 33 21 chr17 12890973 12891213 -72547267 - MIR SINE MIR 0 262 20 501 307 23 28 chr17 12892007 12892183 -72546297 - L3 LINE CR1 -405 1172 998 2276 109 0 0 chr17 12892471 12892765 -72545715 + AluY SINE Alu 1 294 -17 2291 113 7 0 chr17 12893028 12893338 -72545142 + AluSx SINE Alu 1 312 0 2409 89 0 0 chr17 12893947 12894251 -72544229 - AluSg SINE Alu -6 304 1 322 306 16 33 chr17 12896031 12896152 -72542328 - MIR SINE MIR -91 171 53 2349 96 0 0 chr17 12896415 12896718 -72541762 + AluSq SINE Alu 1 303 -10 250 333 56 21 chr17 12896751 12896895 -72541585 - MIR SINE MIR -16 246 98 194 156 0 0 chr17 12897641 12897673 -72540807 - MIR SINE MIR -67 141 110 320 299 6 0 chr17 12897890 12898067 -72540413 + (CA)n Simple_repeat Simple_repeat 1 178 0 460 244 8 17 chr17 12898278 12898397 -72540083 - MER94 DNA DNA -6 128 11 375 235 0 0 chr17 12898397 12898495 -72539985 + (TA)n Simple_repeat Simple_repeat 2 99 0 3232 84 7 28 chr17 12899301 12899368 -72539112 - L1PB2 LINE L1 -2 6149 6082 2238 100 0 0 chr17 12899368 12899677 -72538803 - AluY SINE Alu -2 309 1 3232 84 7 28 chr17 12899677 12900073 -72538407 - L1PB2 LINE L1 -69 6082 5696 2185 104 3 0 chr17 12900183 12900480 -72538000 - AluSp SINE Alu -15 298 1 2186 83 0 7 chr17 12900872 12901173 -72537307 + AluSx SINE Alu 5 303 -9 2122 98 0 3 chr17 12902019 12902314 -72536166 - AluSx SINE Alu -18 294 1 232 278 0 0 chr17 12902492 12902546 -72535934 - MIR SINE MIR -111 151 98 2250 89 0 19 chr17 12902926 12903241 -72535239 - AluSq SINE Alu -4 309 1 186 43 0 0 chr17 12903817 12903840 -72534640 + (CAG)n Simple_repeat Simple_repeat 1 23 0 1713 182 15 12 chr17 12904079 12904408 -72534072 - MER44D DNA MER2_type -8 601 2 2310 66 3 20 chr17 12904622 12904951 -72533529 - AluSp SINE Alu 0 313 1 673 214 96 45 chr17 12905686 12905864 -72532616 - MSTD LTR MaLR 0 396 210 2206 100 3 0 chr17 12906170 12906470 -72532010 - AluSx SINE Alu -11 301 1 25 0 0 0 chr17 12906476 12906501 -72531979 + AT_rich Low_complexity Low_complexity 1 25 0 232 366 87 37 chr17 12906531 12906692 -72531788 - MIR SINE MIR -74 188 20 853 184 40 67 chr17 12907275 12907326 -72531154 + L1MC5 LINE L1 7535 7586 -375 2135 111 7 0 chr17 12907326 12907633 -72530847 + AluSc SINE Alu 1 309 0 853 184 40 67 chr17 12907633 12907983 -72530497 + L1MC5 LINE L1 7586 7925 -36 308 319 44 31 chr17 12908142 12908302 -72530178 + L1MC4 LINE L1 5357 5518 -2267 24 32 0 0 chr17 12908570 12908601 -72529879 + AT_rich Low_complexity Low_complexity 1 31 0 2094 98 3 3 chr17 12908689 12908975 -72529505 + AluSx SINE Alu 1 286 -26 330 241 149 0 chr17 12908984 12909071 -72529409 - L1MC4 LINE L1 -1339 6703 6604 241 311 0 0 chr17 12909071 12909161 -72529319 + L1MC4 LINE L1 6614 6703 -1339 * 252 255 0 43 chr17 12909089 12909183 -72529297 - L1MC4 LINE L1 -1339 6703 6614 333 255 115 64 chr17 12909193 12909285 -72529195 - L1ME LINE L1 -425 5696 5590 2104 44 44 0 chr17 12909285 12909579 -72528901 - AluY SINE Alu 0 306 1 333 255 115 64 chr17 12909579 12909642 -72528838 - L1ME LINE L1 -531 5590 5532 633 215 166 6 chr17 12909652 12909815 -72528665 - MER5A DNA MER1_type 0 189 1 2231 89 0 0 chr17 12909849 12910140 -72528340 + AluSx SINE Alu 1 291 -21 302 311 72 48 chr17 12910269 12910520 -72527960 - L1ME LINE L1 -768 5378 5122 395 270 51 71 chr17 12910654 12910965 -72527515 - L1ME4a LINE L1 -110 6011 5707 609 249 144 10 chr17 12911004 12911218 -72527262 - MIR SINE MIR -2 260 20 477 208 257 0 chr17 12911278 12911422 -72527058 + MER5A DNA MER1_type 3 183 -6 235 191 14 22 chr17 12911530 12911635 -72526845 + MIR3 SINE MIR 123 202 -6 1125 232 0 0 chr17 12912974 12913198 -72525282 - MER58A DNA MER1_type 0 224 1 882 301 104 19 chr17 12913315 12913504 -72524976 - L2 LINE L2 -14 3299 3128 285 29 0 0 chr17 12913504 12913538 -72524942 + (TG)n Simple_repeat Simple_repeat 2 35 0 882 301 104 19 chr17 12913538 12913558 -72524922 - L2 LINE L2 -185 3128 3111 2248 77 3 0 chr17 12913558 12913844 -72524636 - AluSg SINE Alu -23 287 1 882 301 104 19 chr17 12913844 12914065 -72524415 - L2 LINE L2 -202 3111 2831 438 253 66 24 chr17 12914222 12914388 -72524092 - MIR SINE MIR -6 256 84 1236 120 5 5 chr17 12914771 12914955 -72523525 + AluSg SINE Alu 1 184 -126 642 98 0 0 chr17 12914955 12915037 -72523443 + AluSg SINE Alu 53 134 -176 2043 118 10 0 chr17 12915037 12915343 -72523137 + AluSg SINE Alu 1 309 -1 748 93 0 0 chr17 12916058 12916165 -72522315 + AluSg/x SINE Alu 203 309 -3 2129 105 10 0 chr17 12916930 12917236 -72521244 - AluSx SINE Alu -3 309 1 232 219 148 76 chr17 12917837 12917954 -72520526 + MIR SINE MIR 14 151 -93 2184 119 3 0 chr17 12918209 12918519 -72519961 + AluSq SINE Alu 1 311 -2 268 337 61 17 chr17 12918717 12918898 -72519582 + MER102a DNA MER1_type 127 315 -15 2669 172 12 10 chr17 12919485 12919980 -72518500 + L1MB3 LINE L1 5688 6183 0 244 357 64 0 chr17 12920670 12920827 -72517653 - L2 LINE L2 -1089 2225 2059 262 343 0 0 chr17 12920854 12920924 -72517556 - L2 LINE L2 -85 3228 3159 * 1159 319 202 30 chr17 12920919 12921030 -72517450 - L2 LINE L2 -1789 1525 1434 429 20 0 0 chr17 12921030 12921080 -72517400 + (CA)n Simple_repeat Simple_repeat 1 50 0 2244 63 0 3 chr17 12921080 12921365 -72517115 - AluSc SINE Alu -25 284 1 1159 319 202 30 chr17 12921365 12922434 -72516046 - L2 LINE L2 -1879 1435 141 271 275 25 0 chr17 12924961 12925041 -72513439 + (TA)n Simple_repeat Simple_repeat 2 83 0 380 217 0 29 chr17 12926394 12926532 -72511948 + GA-rich Low_complexity Low_complexity 3 136 0 199 400 23 42 chr17 12927516 12927776 -72510704 + L3 LINE CR1 913 1167 -410 38 75 0 0 chr17 12928331 12928411 -72510069 + AT_rich Low_complexity Low_complexity 1 80 0 782 274 26 22 chr17 12928423 12928653 -72509827 - MIR SINE MIR -31 231 1 858 293 105 38 chr17 12929009 12929408 -72509072 - MLT1K LTR MaLR -153 435 10 286 326 18 80 chr17 12929557 12929781 -72508699 - L2 LINE L2 -212 3060 2851 1423 160 54 164 chr17 12929782 12929812 -72508668 - MLT1B LTR MaLR -11 379 347 1992 92 64 0 chr17 12929812 12930094 -72508386 + AluSg SINE Alu 1 300 -10 1423 160 54 164 chr17 12930094 12930361 -72508119 - MLT1B LTR MaLR -43 347 139 2096 106 3 0 chr17 12930361 12930682 -72507798 - AluSp SINE Alu 0 322 1 1423 160 54 164 chr17 12930682 12930808 -72507672 - MLT1B LTR MaLR -251 139 1 332 345 34 27 chr17 12930819 12930967 -72507513 - L2 LINE L2 -492 2822 2674 2128 106 0 0 chr17 12931112 12931404 -72507076 + AluSx SINE Alu 1 292 -20 876 323 191 31 chr17 12931416 12932901 -72505579 - L2 LINE L2 -650 2664 943 184 315 0 0 chr17 12933000 12933054 -72505426 - L2 LINE L2 -1368 1946 1893 1490 85 0 5 chr17 12933093 12933293 -72505187 + AluSc SINE Alu 100 298 -11 4475 125 11 0 chr17 12933298 12933964 -72504516 + L1PA16 LINE L1 5485 6157 -9 488 159 0 34 chr17 12934203 12934291 -72504189 + AluS SINE Alu 2 86 -227 2199 100 10 0 chr17 12934747 12935056 -72503424 + AluSx SINE Alu 1 312 0 2048 127 0 0 chr17 12935678 12935977 -72502503 - AluSc SINE Alu -10 299 1 2343 86 0 0 chr17 12937102 12937404 -72501076 - AluSx SINE Alu -10 302 1 256 250 12 0 chr17 12937474 12937554 -72500926 + (TG)n Simple_repeat Simple_repeat 1 81 0 244 311 48 90 chr17 12937751 12937909 -72500571 + L2 LINE L2 3035 3187 -85 2549 39 7 0 chr17 12937909 12938218 -72500262 - AluY SINE Alu 0 311 1 1917 135 24 9 chr17 12938485 12938585 -72499895 + MER44D DNA MER2_type 1 98 -2393 2179 108 0 0 chr17 12938585 12938882 -72499598 + AluSx SINE Alu 1 297 -15 1917 135 24 9 chr17 12938882 12939115 -72499365 + MER44D DNA MER2_type 98 609 0 276 282 134 7 chr17 12940137 12940279 -72498201 + MIR3 SINE MIR 47 206 -2 2259 88 0 0 chr17 12940774 12941069 -72497411 + AluY SINE Alu 1 295 -16 2279 91 0 0 chr17 12941071 12941369 -72497111 - AluSq SINE Alu -15 298 1 204 211 0 0 chr17 12943302 12943340 -72495140 + CT-rich Low_complexity Low_complexity 3 40 0 1410 155 4 0 chr17 12943340 12943566 -72494914 - AluJb SINE Alu -1 311 85 314 335 66 11 chr17 12944163 12944345 -72494135 + MIR SINE MIR 23 214 -48 2322 93 0 0 chr17 12944666 12944976 -72493504 + AluY SINE Alu 1 310 -1 490 305 14 0 chr17 12945641 12945782 -72492698 - MIR SINE MIR -21 241 99 686 108 9 18 chr17 12946374 12946485 -72491995 + FLAM_A SINE Alu 33 142 0 200 170 43 0 chr17 12946661 12946708 -72491772 + GA-rich Low_complexity Low_complexity 6 54 0 1549 192 0 10 chr17 12947562 12947864 -72490616 - AluJb SINE Alu -13 299 1 376 259 58 36 chr17 12947988 12948127 -72490353 - MER103 DNA DNA -15 151 10 2224 95 0 20 chr17 12948940 12949236 -72489244 - AluSx SINE Alu -22 290 1 245 163 70 0 chr17 12949917 12949960 -72488520 - MLT1H1 LTR MaLR 0 555 510 * 303 226 226 20 chr17 12949929 12950031 -72488449 - MLT1G1 LTR MaLR -15 580 458 798 292 63 35 chr17 12950197 12950564 -72487916 - MLT1G1 LTR MaLR -168 413 11 725 244 182 62 chr17 12950598 12950664 -72487816 - MLT1D LTR MaLR 0 505 448 2371 88 3 3 chr17 12950664 12950971 -72487509 - AluSp SINE Alu -6 307 1 725 244 182 62 chr17 12950971 12951355 -72487125 - MLT1D LTR MaLR -57 448 1 28 29 0 0 chr17 12951629 12951664 -72486816 + AT_rich Low_complexity Low_complexity 1 35 0 2227 102 7 0 chr17 12951989 12952282 -72486198 - AluSp SINE Alu -18 295 1 2038 115 0 11 chr17 12952871 12953150 -72485330 + AluSx SINE Alu 1 276 -36 2348 92 7 0 chr17 12953152 12953447 -72485033 - AluSg SINE Alu -13 297 1 287 285 131 40 chr17 12955150 12955448 -72483032 + L1M4 LINE L1 3847 4171 -1975 354 283 54 38 chr17 12955970 12956154 -72482326 + MARNA DNA Mariner 43 229 -357 199 284 90 0 chr17 12956297 12956364 -72482116 + MIR3 SINE MIR 127 199 -9 2083 98 7 27 chr17 12956477 12956772 -72481708 + AluSp SINE Alu 1 289 -24 225 180 0 0 chr17 12956818 12956868 -72481612 + (TG)n Simple_repeat Simple_repeat 2 51 0 184 277 0 0 chr17 12957233 12957280 -72481200 + MIR SINE MIR 103 149 -113 2715 184 38 10 chr17 12958316 12958892 -72479588 + L1MB7 LINE L1 5593 6184 0 2649 169 60 44 chr17 12959388 12959537 -72478943 - L1MB3 LINE L1 -28 6155 6010 2097 116 0 35 chr17 12959537 12959855 -72478625 + AluSx SINE Alu 1 307 -5 2649 169 60 44 chr17 12959855 12960272 -72478208 - L1MB3 LINE L1 -173 6010 5580 1280 79 37 0 chr17 12960848 12961012 -72477468 + AluY SINE Alu 141 310 -1 316 324 0 9 chr17 12961870 12961975 -72476505 + MER5B DNA MER1_type 75 178 0 701 300 17 17 chr17 12962329 12962566 -72475914 + MIR SINE MIR 14 250 -12 343 370 16 48 chr17 12963713 12963964 -72474516 - L1ME LINE L1 -352 5818 5575 296 336 49 0 chr17 12964731 12964874 -72473606 + L2 LINE L2 3164 3313 0 303 28 0 0 chr17 12964983 12965019 -72473461 + (TG)n Simple_repeat Simple_repeat 2 37 0 2153 121 3 3 chr17 12965040 12965347 -72473133 - AluSx SINE Alu -5 307 1 212 309 41 10 chr17 12965993 12966090 -72472390 - L2 LINE L2 -784 2530 2431 519 198 8 132 chr17 12966866 12966924 -72471556 + L1MC5 LINE L1 7623 7687 -274 2297 95 0 7 chr17 12966924 12967218 -72471262 - AluSx SINE Alu -20 292 1 519 198 8 132 chr17 12967218 12967241 -72471239 + L1MC5 LINE L1 7687 7711 -250 945 108 15 0 chr17 12967241 12967371 -72471109 - FLAM_C SINE Alu -1 132 1 519 198 8 132 chr17 12967371 12967531 -72470949 + L1MC5 LINE L1 7711 7835 -126 1711 123 108 0 chr17 12967676 12967931 -72470549 + AluSx SINE Alu 1 284 -24 207 0 0 0 chr17 12967931 12967954 -72470526 + (CTAAG)n Simple_repeat Simple_repeat 2 24 0 2312 104 3 0 chr17 12968425 12968723 -72469757 + AluSx SINE Alu 1 299 -13 216 228 0 0 chr17 12968874 12968931 -72469549 + GA-rich Low_complexity Low_complexity 2 58 0 2261 96 0 17 chr17 12968946 12969247 -72469233 + AluSc SINE Alu 1 296 -13 852 168 0 0 chr17 12970529 12970660 -72467820 + FLAM_A SINE Alu 1 131 -2 2134 124 0 3 chr17 12971291 12971590 -72466890 + AluSg SINE Alu 3 300 -10 1136 188 9 23 chr17 12972172 12972390 -72466090 - MER20 DNA MER1_type -4 215 1 2506 74 0 3 chr17 12973969 12974280 -72464200 + AluY SINE Alu 1 310 -1 211 269 172 21 chr17 12974383 12974476 -72464004 + L2 LINE L2 3166 3272 0 189 0 0 0 chr17 12975131 12975152 -72463328 + (T)n Simple_repeat Simple_repeat 1 21 0 2012 110 11 0 chr17 12975652 12975916 -72462564 - AluSx SINE Alu -45 267 1 3710 188 81 26 chr17 12976028 12976841 -72461639 + L1MCa LINE L1 20 877 -5549 4881 163 19 9 chr17 12976841 12977712 -72460768 + L1MC1 LINE L1 5454 6333 0 2180 125 14 0 chr17 12978147 12978443 -72460037 - AluSx SINE Alu -12 300 1 948 175 26 10 chr17 12978899 12979093 -72459387 - L1MC1 LINE L1 -146 6187 5991 2524 60 3 0 chr17 12979588 12979888 -72458592 + AluY SINE Alu 1 301 -10 345 267 82 51 chr17 12980747 12981142 -72457338 + L1P LINE L1 4639 5060 -1086 682 276 46 86 chr17 12981314 12981854 -72456626 + L1MC4a LINE L1 5263 5823 -1985 351 0 0 0 chr17 12981854 12981893 -72456587 + (TG)n Simple_repeat Simple_repeat 2 40 0 682 276 46 86 chr17 12981893 12981936 -72456544 + L1MC4a LINE L1 5823 5866 -1942 2534 59 0 10 chr17 12981936 12982243 -72456237 + AluY SINE Alu 1 304 -7 682 276 46 86 chr17 12982243 12982353 -72456127 + L1MC4a LINE L1 5866 5929 -1879 2155 121 0 0 chr17 12982363 12982683 -72455797 + AluSx SINE Alu 1 320 0 2187 127 0 13 chr17 12983197 12983513 -72454967 + AluSq SINE Alu 1 312 -1 319 315 11 0 chr17 12984966 12985058 -72453422 + Charlie8 DNA MER1_type 163 255 -2162 772 127 33 104 chr17 12985132 12985344 -72453136 - L1MA7 LINE L1 -2 6289 6093 21 0 0 0 chr17 12985790 12985811 -72452669 + AT_rich Low_complexity Low_complexity 1 21 0 455 254 78 74 chr17 12985979 12986263 -72452217 - Charlie8 DNA MER1_type -2132 285 1 25 75 0 0 chr17 12987147 12987200 -72451280 + AT_rich Low_complexity Low_complexity 1 53 0 346 200 11 42 chr17 12987211 12987306 -72451174 - L1MC4 LINE L1 -1339 6703 6612 263 56 74 0 chr17 12987306 12987360 -72451120 + (TA)n Simple_repeat Simple_repeat 1 58 0 2207 117 0 0 chr17 12987361 12987652 -72450828 - AluSx SINE Alu -21 291 1 1494 181 93 34 chr17 12988825 12989178 -72449302 - MLT1B LTR MaLR -13 377 4 2276 81 13 32 chr17 12990218 12990526 -72447954 + AluSq SINE Alu 1 302 -11 1030 73 0 0 chr17 12990908 12991031 -72447449 + AluSq SINE Alu 73 195 -118 740 278 82 28 chr17 12991300 12991688 -72446792 - MER113 DNA MER1_type? -7 514 106 298 302 16 40 chr17 12991965 12992091 -72446389 - MIR3 SINE MIR -72 136 14 1455 150 0 26 chr17 12992161 12992394 -72446086 + AluJo SINE Alu 74 300 -12 1922 117 0 0 chr17 12992396 12992692 -72445788 + AluSq SINE Alu 29 324 0 610 281 128 40 chr17 12993072 12993340 -72445140 + L2 LINE L2 2825 3149 -164 2530 60 3 3 chr17 12993340 12993640 -72444840 - AluY SINE Alu -11 300 1 610 281 128 40 chr17 12993640 12993816 -72444664 + L2 LINE L2 3149 3308 -5 2391 102 0 0 chr17 12994049 12994353 -72444127 + AluSx SINE Alu 1 304 -8 1521 155 21 14 chr17 12994446 12994737 -72443743 - L1MA9 LINE L1 -11 6301 6009 690 215 85 60 chr17 12995854 12996032 -72442448 - MER3 DNA MER1_type -4 205 20 1511 182 109 121 chr17 12996032 12996593 -72441887 + MLT2B3 LTR ERVL 1 554 0 690 215 85 60 chr17 12996593 12996614 -72441866 - MER3 DNA MER1_type -189 20 1 1248 142 83 9 chr17 12996628 12996846 -72441634 - MER46A DNA MER2_type -1 235 2 2312 103 0 3 chr17 12997050 12997350 -72441130 + AluSx SINE Alu 1 299 -13 240 209 58 70 chr17 12998326 12998412 -72440068 + L1M4 LINE L1 4488 4572 -1574 1387 160 0 0 chr17 12998477 12998702 -72439778 + AluSg/x SINE Alu 80 304 -6 2355 68 0 17 chr17 12998906 12999202 -72439278 - AluSq SINE Alu -2 311 21 445 285 165 16 chr17 12999204 12999647 -72438833 - L1MC4a LINE L1 -616 5546 5267 2153 127 0 3 chr17 12999744 13000036 -72438444 - AluSx SINE Alu -8 304 14 498 119 0 0 chr17 13000036 13000103 -72438377 - AluS SINE Alu -246 67 1 404 230 251 15 chr17 13000111 13000437 -72438043 - HAL1 LINE L1 -134 2373 1971 24 0 0 0 chr17 13000563 13000587 -72437893 + AT_rich Low_complexity Low_complexity 1 24 0 3473 253 89 59 chr17 13000604 13002480 -72436000 - HAL1 LINE L1 -564 1943 11 353 288 94 67 chr17 13002518 13002889 -72435591 - L1MDa LINE L1 -3907 2633 2253 599 165 45 38 chr17 13002920 13003006 -72435474 + MER34B LTR ERV1 294 378 -164 2098 106 11 0 chr17 13003006 13003288 -72435192 + AluSx SINE Alu 18 302 -10 599 165 45 38 chr17 13003288 13003442 -72435038 + MER34B LTR ERV1 378 512 -30 249 252 91 14 chr17 13003623 13003823 -72434657 - HAL1b LINE L1 -861 1646 428 272 288 111 73 chr17 13003899 13004608 -72433872 - L1MDa LINE L1 -4880 1650 915 2319 92 0 25 chr17 13005230 13005547 -72432933 + AluSq SINE Alu 1 309 -4 2999 191 78 21 chr17 13005633 13006390 -72432090 + L1MB5 LINE L1 5349 6148 -26 1945 165 0 16 chr17 13006766 13007082 -72431398 - AluJo SINE Alu -1 311 1 1716 173 76 31 chr17 13007125 13007507 -72430973 + MER21B LTR ERV1 412 810 -53 1285 153 24 5 chr17 13007594 13007803 -72430677 + MER20 DNA MER1_type 4 216 -3 2089 95 0 41 chr17 13008543 13008837 -72429643 + AluSg SINE Alu 21 302 -8 382 314 60 69 chr17 13008868 13009202 -72429278 - L1MC4a LINE L1 -1731 6077 5747 2192 95 7 13 chr17 13009329 13009635 -72428845 + AluSc SINE Alu 1 304 -5 1607 50 5 0 chr17 13009930 13010129 -72428351 + L1PB1 LINE L1 5948 6147 -4 21 0 0 0 chr17 13010129 13010150 -72428330 + AT_rich Low_complexity Low_complexity 1 21 0 414 0 0 0 chr17 13010548 13010594 -72427886 + (CA)n Simple_repeat Simple_repeat 2 47 0 * 482 0 17 0 chr17 13010593 13010651 -72427829 + (TC)n Simple_repeat Simple_repeat 1 59 0 577 303 27 27 chr17 13010829 13011050 -72427430 - MIR SINE MIR -11 251 31 635 314 106 20 chr17 13011250 13011931 -72426549 - L2 LINE L2 -148 3165 2424 233 350 21 14 chr17 13011946 13012089 -72426391 + L2 LINE L2 2066 2209 -1105 418 326 130 47 chr17 13012114 13012511 -72425969 + L2 LINE L2 2466 2829 -443 2471 93 0 7 chr17 13012511 13012821 -72425659 + AluSq SINE Alu 1 308 -5 418 326 130 47 chr17 13012821 13013146 -72425334 + L2 LINE L2 2829 3266 -6 2345 101 3 0 chr17 13013308 13013616 -72424864 + AluSg SINE Alu 1 309 -1 2290 89 0 0 chr17 13014466 13014778 -72423702 + AluSc SINE Alu 1 312 0 280 274 0 0 chr17 13015070 13015143 -72423337 + MLT1L LTR MaLR 322 394 -221 1749 185 143 17 chr17 13015268 13015738 -72422742 + MER74A LTR ERVL 3 531 -27 180 0 0 0 chr17 13016004 13016024 -72422456 + (A)n Simple_repeat Simple_repeat 1 20 0 5530 48 3 13 chr17 13017464 13018165 -72420315 - L1PA5 LINE L1 -3 6151 5458 1170 55 0 0 chr17 13018169 13018334 -72420146 + L1PA5 LINE L1 5281 5445 -709 951 118 0 0 chr17 13018575 13018711 -72419769 - AluSc SINE Alu 0 309 174 282 95 0 0 chr17 13019407 13019449 -72419031 + (TC)n Simple_repeat Simple_repeat 2 43 0 252 188 0 0 chr17 13019459 13019528 -72418952 + (CA)n Simple_repeat Simple_repeat 2 70 0 5824 207 85 66 chr17 13019671 13021645 -72416835 + L1ME1 LINE L1 1 2017 -4523 2099 93 24 10 chr17 13021645 13021936 -72416544 + AluSx SINE Alu 1 295 -17 5824 207 85 66 chr17 13021936 13021986 -72416494 + L1ME1 LINE L1 2017 2065 -4475 375 178 0 0 chr17 13021989 13022062 -72416418 + L1ME1 LINE L1 2277 2349 -4191 1370 254 46 6 chr17 13022078 13022444 -72416036 + MSTD LTR MaLR 3 383 -13 5948 227 78 50 chr17 13022447 13024133 -72414347 + MSTD-int LTR MaLR 3 1735 0 1349 207 134 9 chr17 13024143 13024486 -72413994 + MSTD LTR MaLR 11 396 0 6766 232 75 40 chr17 13024486 13026195 -72412285 + L1ME1 LINE L1 2387 4034 -2526 1461 176 10 52 chr17 13026195 13026485 -72411995 + AluJb SINE Alu 1 278 -34 186 103 0 0 chr17 13026485 13026514 -72411966 + (CAAT)n Simple_repeat Simple_repeat 4 32 0 6766 232 75 40 chr17 13026514 13028176 -72410304 + L1ME1 LINE L1 4034 5635 -925 249 57 0 0 chr17 13028176 13028211 -72410269 + (CA)n Simple_repeat Simple_repeat 2 36 0 6766 232 75 40 chr17 13028211 13028382 -72410098 + L1ME1 LINE L1 5635 5798 -762 252 0 0 0 chr17 13028382 13028410 -72410070 + (CA)n Simple_repeat Simple_repeat 2 29 0 6766 232 75 40 chr17 13028410 13028537 -72409943 + L1ME1 LINE L1 5798 5919 -641 2216 100 0 0 chr17 13028537 13028841 -72409639 + AluSg SINE Alu 2 305 0 6766 232 75 40 chr17 13028841 13029189 -72409291 + L1ME1 LINE L1 5919 6542 -18 343 342 150 18 chr17 13029294 13029627 -72408853 + L1ME3A LINE L1 2022 2398 -3998 321 293 108 48 chr17 13029655 13029904 -72408576 + L1ME3A LINE L1 2421 2684 -3531 297 248 93 30 chr17 13029961 13030231 -72408249 + L1ME3A LINE L1 2785 3071 -3144 443 268 116 80 chr17 13030290 13031734 -72406746 + L1ME3A LINE L1 3190 4719 -1496 1439 199 16 32 chr17 13031734 13032050 -72406430 + AluJo SINE Alu 1 311 -1 443 268 116 80 chr17 13032050 13032481 -72405999 + L1ME3A LINE L1 4719 5133 -1082 390 316 68 25 chr17 13032621 13033281 -72405199 + L1ME3A LINE L1 5335 6013 -226 1038 158 72 7 chr17 13033696 13033977 -72404503 + Tigger2a DNA MER2_type 34 422 -22 271 226 20 0 chr17 13034000 13034102 -72404378 + (TA)n Simple_repeat Simple_repeat 1 104 0 3852 65 27 0 chr17 13034236 13034747 -72403733 + L1PB1 LINE L1 5625 6149 -2 258 280 13 0 chr17 13034963 13035038 -72403442 - L3 LINE CR1 -20 1557 1482 373 250 71 14 chr17 13035509 13035649 -72402831 - MER103 DNA DNA -1 165 18 1794 51 0 0 chr17 13035973 13036187 -72402293 - AluY SINE Alu -18 293 80 2311 102 7 3 chr17 13036798 13037103 -72401377 - AluSc SINE Alu -3 306 1 1134 246 82 40 chr17 13037253 13037704 -72400776 - MER74A LTR ERVL 0 558 89 2397 78 0 0 chr17 13037779 13038073 -72400407 - AluSq SINE Alu -19 294 1 1831 159 13 10 chr17 13038120 13038422 -72400058 - AluJo SINE Alu -7 305 3 1035 168 40 6 chr17 13038488 13038661 -72399819 + MER5A DNA MER1_type 11 189 0 2189 119 0 3 chr17 13038990 13039284 -72399196 - AluSq SINE Alu -18 295 3 398 279 66 35 chr17 13039417 13039626 -72398854 + MLT1L LTR MaLR 112 392 -202 2181 115 0 19 chr17 13039760 13040119 -72398361 - AluSx SINE Alu 0 312 1 200 302 52 42 chr17 13040368 13040464 -72398016 - L2 LINE L2 -209 3063 2967 237 281 117 31 chr17 13041057 13041253 -72397227 + HAL1 LINE L1 1425 1637 -870 2638 116 7 30 chr17 13041723 13042020 -72396460 - MSTA LTR MaLR 0 428 143 2126 142 131 8 chr17 13042020 13042401 -72396079 + MSTA LTR MaLR 1 428 0 2638 116 7 30 chr17 13042401 13042541 -72395939 - MSTA LTR MaLR -285 143 1 352 252 0 37 chr17 13042720 13042827 -72395653 + A-rich Low_complexity Low_complexity 4 106 0 329 279 55 62 chr17 13042932 13043222 -72395258 + HAL1 LINE L1 2210 2497 -10 465 244 24 0 chr17 13043233 13043360 -72395120 + L1ME4a LINE L1 5479 5608 -513 1794 164 34 10 chr17 13043393 13043686 -72394794 + AluJo SINE Alu 1 300 -12 326 243 208 7 chr17 13043864 13044008 -72394472 + L1ME4a LINE L1 5843 6015 -106 960 171 25 20 chr17 13044079 13044278 -72394202 + L1MB3 LINE L1 5972 6171 -12 26 0 0 0 chr17 13044282 13044308 -72394172 + AT_rich Low_complexity Low_complexity 1 26 0 25 31 0 0 chr17 13044749 13044781 -72393699 + AT_rich Low_complexity Low_complexity 1 32 0 2302 89 3 10 chr17 13044784 13045087 -72393393 + AluSg SINE Alu 5 305 -5 391 86 14 14 chr17 13045087 13045157 -72393323 + (TA)n Simple_repeat Simple_repeat 2 71 0 1715 176 29 13 chr17 13045310 13045691 -72392789 + MLT1B LTR MaLR 1 387 -3 698 224 126 85 chr17 13046684 13047224 -72391256 + MER34B LTR ERV1 1 562 -3 2509 69 3 0 chr17 13047923 13048227 -72390253 - AluY SINE Alu -6 305 1 258 303 124 21 chr17 13048470 13048615 -72389865 - HAL1 LINE L1 -957 1550 1391 879 242 166 5 chr17 13049573 13049994 -72388486 + MLT1G1 LTR MaLR 1 587 -8 23 0 0 0 chr17 13050225 13050248 -72388232 + AT_rich Low_complexity Low_complexity 1 23 0 289 385 44 7 chr17 13050420 13050555 -72387925 + MIR3 SINE MIR 30 169 -39 42 0 0 0 chr17 13050555 13050597 -72387883 + AT_rich Low_complexity Low_complexity 1 42 0 901 140 0 22 chr17 13050593 13050729 -72387751 - FLAM_C SINE Alu 0 133 1 1771 133 68 31 chr17 13050729 13051022 -72387458 - AluJb SINE Alu -8 304 1 187 220 0 60 chr17 13051112 13051162 -72387318 - MIR3 SINE MIR -54 154 108 473 297 171 24 chr17 13051366 13051612 -72386868 - MLT1K LTR MaLR -70 518 237 2194 164 28 89 chr17 13051612 13051800 -72386680 + MLT1D LTR MaLR 1 199 -306 2155 110 21 0 chr17 13051800 13052090 -72386390 + AluSx SINE Alu 1 296 -16 2194 164 28 89 chr17 13052090 13052439 -72386041 + MLT1D LTR MaLR 199 505 0 821 156 7 15 chr17 13052444 13052579 -72385901 + AluSq/x SINE Alu 2 135 -177 2036 139 20 0 chr17 13052579 13052881 -72385599 + AluSx SINE Alu 1 308 -4 536 336 137 0 chr17 13052901 13053112 -72385368 - MLT1K LTR MaLR -346 242 3 233 158 0 26 chr17 13053180 13053218 -72385262 - Alu SINE Alu -181 121 85 1226 254 61 80 chr17 13053515 13054054 -72384426 + MER74A LTR ERVL 1 529 -29 2021 182 70 22 chr17 13054328 13054639 -72383841 - MLT1C LTR MaLR 0 467 127 2372 117 45 28 chr17 13054639 13054997 -72383483 + THE1B LTR MaLR 1 364 0 2021 182 70 22 chr17 13054997 13055129 -72383351 - MLT1C LTR MaLR -340 127 3 180 250 0 135 chr17 13055249 13055345 -72383135 - L3 LINE CR1 -23 1554 1472 432 0 0 0 chr17 13055921 13055969 -72382511 + (TAAA)n Simple_repeat Simple_repeat 4 51 0 1031 209 94 94 chr17 13056128 13056502 -72381978 + MSTD LTR MaLR 19 392 -4 600 281 115 5 chr17 13056903 13057120 -72381360 - MIR SINE MIR -17 245 5 238 193 70 0 chr17 13058379 13058436 -72380044 + L1 LINE L1 5201 5261 -885 207 100 0 0 chr17 13058460 13058490 -72379990 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 428 121 15 15 chr17 13058493 13058559 -72379921 - FLAM_A SINE Alu -23 119 54 2508 81 3 0 chr17 13058749 13059058 -72379422 - AluSp SINE Alu -3 310 1 304 370 86 19 chr17 13059068 13059325 -72379155 - L1MC4a LINE L1 -1875 5933 5660 1168 130 60 27 chr17 13060452 13060773 -72377707 + MLT2A2 LTR ERVL 205 452 -1 440 284 31 67 chr17 13060846 13060894 -72377586 + L1M4 LINE L1 3061 3109 -3037 2363 79 7 0 chr17 13060894 13061186 -72377294 + AluY SINE Alu 1 294 -17 440 284 31 67 chr17 13061186 13061391 -72377089 + L1M4 LINE L1 3109 3305 -2841 1917 78 127 4 chr17 13062000 13062268 -72376212 + AluSp SINE Alu 1 301 -2 231 312 142 7 chr17 13062656 13062797 -72375683 - MIR3 SINE MIR -4 204 45 495 224 65 0 chr17 13062882 13062989 -72375491 - L2 LINE L2 0 3313 3200 193 272 39 107 chr17 13063028 13063131 -72375349 - L2 LINE L2 -3204 110 15 297 324 35 35 chr17 13063469 13063614 -72374866 + MIR3 SINE MIR 57 201 -7 234 0 0 0 chr17 13064140 13064166 -72374314 + (A)n Simple_repeat Simple_repeat 1 26 0 2408 77 3 3 chr17 13064670 13064969 -72373511 - AluSp SINE Alu -14 299 1 187 184 61 0 chr17 13065027 13065076 -72373404 - L2 LINE L2 -80 3233 3182 2400 31 41 14 chr17 13065930 13066222 -72372258 + AluY SINE Alu 1 300 -11 262 344 40 55 chr17 13068096 13068204 -72370276 - L2 LINE L2 -27 3286 3178 2445 89 0 0 chr17 13068204 13068507 -72369973 - AluSc SINE Alu -6 303 1 262 344 40 55 chr17 13068507 13068651 -72369829 - L2 LINE L2 -135 3178 3038 1788 249 45 79 chr17 13068825 13069176 -72369304 + L1ME LINE L1 6 367 -5703 2006 208 26 0 chr17 13069176 13069560 -72368920 + MSTD LTR MaLR 1 394 -2 1788 249 45 79 chr17 13069560 13069778 -72368702 + L1ME LINE L1 367 591 -5479 2146 125 3 3 chr17 13069778 13070083 -72368397 + AluSx SINE Alu 1 305 -7 1788 249 45 79 chr17 13070083 13070364 -72368116 + L1ME LINE L1 591 828 -5242 823 181 163 0 chr17 13071058 13071218 -72367262 + MER5A DNA MER1_type 2 187 -2 1692 143 7 22 chr17 13071290 13071562 -72366918 - AluJb SINE Alu 0 312 45 253 245 326 0 chr17 13071582 13071680 -72366800 + MER5B DNA MER1_type 46 175 -3 304 203 14 14 chr17 13071880 13071949 -72366531 + MER69 DNA AcHobo 2456 2524 -2 395 270 87 0 chr17 13071950 13072065 -72366415 - MIR SINE MIR -112 150 26 423 52 0 0 chr17 13072082 13072140 -72366340 + (TG)n Simple_repeat Simple_repeat 1 58 0 1518 166 72 8 chr17 13072153 13072418 -72366062 - AluSx SINE Alu -30 282 1 220 276 52 0 chr17 13072548 13072606 -72365874 - MER91 DNA MER1_type -3 187 127 23 0 0 0 chr17 13073554 13073577 -72364903 + AT_rich Low_complexity Low_complexity 1 23 0 1927 119 0 107 chr17 13074728 13075064 -72363416 + AluSq SINE Alu 1 300 -3 390 318 62 47 chr17 13076007 13076281 -72362199 - L3 LINE CR1 -1077 500 223 784 114 0 0 chr17 13076320 13076425 -72362055 - L1MA3 LINE L1 -7 6298 6194 2735 217 39 24 chr17 13076425 13077053 -72361427 - L1M4 LINE L1 -3108 3038 2396 2259 104 0 29 chr17 13077053 13077369 -72361111 - AluSx SINE Alu -5 307 1 2735 217 39 24 chr17 13077369 13077454 -72361026 - L1M4 LINE L1 -3750 2396 2314 3506 121 22 15 chr17 13077558 13078096 -72360384 + L1MB2 LINE L1 5623 6164 -7 21 0 0 0 chr17 13078096 13078117 -72360363 + AT_rich Low_complexity Low_complexity 1 21 0 230 170 0 21 chr17 13079019 13079066 -72359414 + L2 LINE L2 3190 3235 -78 550 111 0 81 chr17 13079193 13079292 -72359188 - AluJ/FRAM SINE Alu 0 312 222 3044 149 39 16 chr17 13079582 13080168 -72358312 + MER4B LTR ERV1 3 779 0 476 141 0 59 chr17 13080925 13080969 -72357511 + MER67A LTR ERV1 1 39 -504 3859 162 5 70 chr17 13080969 13081708 -72356772 + LTR8 LTR ERV1 1 691 0 476 141 0 59 chr17 13081708 13081748 -72356732 + MER67A LTR ERV1 39 80 -463 2598 197 71 47 chr17 13081748 13082393 -72356087 + MER67B LTR ERV1 1 661 0 413 270 158 23 chr17 13082430 13082645 -72355835 + MIR SINE MIR 3 246 -16 405 296 22 37 chr17 13083023 13083158 -72355322 - MIR3 SINE MIR -26 182 50 701 304 140 22 chr17 13083725 13084126 -72354354 - L2 LINE L2 -1 3312 2865 648 282 118 66 chr17 13084595 13084785 -72353695 + L1ME2 LINE L1 3543 3722 -2424 2427 75 0 28 chr17 13084785 13085105 -72353375 + AluY SINE Alu 1 311 0 648 282 118 66 chr17 13085105 13085567 -72352913 + L1ME2 LINE L1 3722 4229 -1917 272 173 49 62 chr17 13085567 13085648 -72352832 - MER116 DNA Mariner 0 80 1 1828 104 40 0 chr17 13085684 13085933 -72352547 - AluSx SINE Alu -8 304 46 237 269 69 35 chr17 13086216 13086361 -72352119 - L1M4 LINE L1 -2326 3820 3671 1393 91 17 65 chr17 13087438 13087670 -72350810 + L1PA13 LINE L1 5939 6159 -4 398 315 55 65 chr17 13087842 13087937 -72350543 - L2 LINE L2 -4 3309 3215 2139 144 76 30 chr17 13087937 13088294 -72350186 + MLT2D LTR ERVL 1 379 -35 246 32 0 0 chr17 13088294 13088325 -72350155 + (CA)n Simple_repeat Simple_repeat 1 31 0 2139 144 76 30 chr17 13088325 13088363 -72350117 + MLT2D LTR ERVL 379 414 0 398 315 55 65 chr17 13088363 13088398 -72350082 - L2 LINE L2 -98 3215 3181 1922 142 3 7 chr17 13088398 13088687 -72349793 + AluJb SINE Alu 1 288 -24 398 315 55 65 chr17 13088687 13089149 -72349331 - L2 LINE L2 -132 3181 2649 654 254 36 6 chr17 13089295 13089460 -72349020 + L2 LINE L2 2573 2742 -572 1070 321 132 43 chr17 13089517 13090551 -72347929 - L2 LINE L2 -1061 2253 1129 1134 236 164 0 chr17 13091334 13091626 -72346854 + MER58B DNA MER1_type 1 340 -1 187 313 156 21 chr17 13093116 13093212 -72345268 + L2 LINE L2 3136 3244 -28 21 36 0 0 chr17 13093388 13093416 -72345064 + AT_rich Low_complexity Low_complexity 1 28 0 455 113 0 0 chr17 13093420 13093491 -72344989 + L1MA5A LINE L1 6226 6296 -1 2211 241 78 20 chr17 13093494 13094559 -72343921 + L1ME2 LINE L1 4794 5928 -236 7780 242 77 23 chr17 13094560 13096317 -72342163 - L1M4 LINE L1 -1250 4896 2968 740 105 30 75 chr17 13096317 13096450 -72342030 - L1MA3 LINE L1 0 6305 6179 7780 242 77 23 chr17 13096450 13097143 -72341337 - L1M4 LINE L1 -3178 2968 2314 290 234 113 32 chr17 13097149 13097273 -72341207 - L1M4 LINE L1 -1851 4295 4162 236 241 89 36 chr17 13098059 13098171 -72340309 + MIR SINE MIR 28 145 -117 2532 66 0 0 chr17 13099194 13099499 -72338981 + AluSx SINE Alu 1 305 -7 221 329 0 0 chr17 13100182 13100258 -72338222 + (TA)n Simple_repeat Simple_repeat 2 77 0 303 247 68 89 chr17 13101534 13101680 -72336800 + L2 LINE L2 3124 3266 -6 912 244 68 24 chr17 13101702 13101997 -72336483 + MLT1C LTR MaLR 4 311 -156 392 246 55 0 chr17 13102018 13102128 -72336352 - MER21B LTR ERV1 -124 739 624 473 159 0 0 chr17 13102134 13102203 -72336277 + Tigger2 DNA MER2_type 1 69 -2649 * 2719 127 39 7 chr17 13102192 13102388 -72336092 + Tigger2 DNA MER2_type 2273 2461 -257 2587 57 0 16 chr17 13102388 13102704 -72335776 - AluY SINE Alu 0 311 1 2719 127 39 7 chr17 13102704 13102939 -72335541 + Tigger2 DNA MER2_type 2461 2718 0 1072 270 67 47 chr17 13102944 13103374 -72335106 - MER21B LTR ERV1 -406 457 19 855 194 11 12 chr17 13103381 13103552 -72334928 + MLT1C LTR MaLR 307 467 0 2417 103 54 14 chr17 13104065 13104415 -72334065 + THE1B LTR MaLR 1 364 0 10372 112 32 34 chr17 13104415 13105999 -72332481 + THE1B-int LTR MaLR 1 1580 0 2696 115 0 6 chr17 13105999 13106365 -72332115 + THE1B LTR MaLR 1 364 0 1671 182 21 52 chr17 13106578 13106963 -72331517 + MER93b LTR ERV1 1 373 0 523 301 7 13 chr17 13106963 13107116 -72331364 - MIR SINE MIR -96 166 15 286 228 193 18 chr17 13107205 13107319 -72331161 - MER94 DNA DNA 0 134 1 1243 253 119 13 chr17 13107650 13108029 -72330451 + LTR16A LTR ERVL 26 444 -6 371 274 28 78 chr17 13109201 13109380 -72329100 + MLT1L LTR MaLR 8 177 -438 378 267 120 42 chr17 13109610 13109801 -72328679 + MLT1L LTR MaLR 410 615 0 386 157 56 22 chr17 13109811 13109900 -72328580 + MER103 DNA DNA 52 143 -23 566 198 0 9 chr17 13110113 13110219 -72328261 + FRAM SINE Alu 42 146 -30 2046 146 0 19 chr17 13110328 13110463 -72328017 + AluSx SINE Alu 1 137 -175 2436 73 10 7 chr17 13110463 13110764 -72327716 + AluSx SINE Alu 1 302 -10 387 0 0 0 chr17 13110764 13110807 -72327673 + (TA)n Simple_repeat Simple_repeat 1 43 0 2046 146 0 19 chr17 13110807 13110985 -72327495 + AluSx SINE Alu 135 309 -3 342 176 15 15 chr17 13111444 13111512 -72326968 + LTR67 LTR ERVL 487 554 -3 367 253 182 52 chr17 13111856 13112180 -72326300 - L1ME4a LINE L1 -22 6099 5734 227 341 60 33 chr17 13112204 13112386 -72326094 + MIR SINE MIR 2 188 -74 267 315 18 9 chr17 13112969 13113080 -72325400 + MIR SINE MIR 117 228 -34 258 262 60 48 chr17 13113148 13113232 -72325248 + MLT1I LTR MaLR 128 212 -197 284 200 14 14 chr17 13113309 13113379 -72325101 + MLT1I LTR MaLR 340 409 0 395 294 9 0 chr17 13113612 13113721 -72324759 - MIR SINE MIR -2 260 151 1776 105 4 0 chr17 13113806 13114035 -72324445 + AluSq SINE Alu 1 230 -83 511 266 39 98 chr17 13114185 13114490 -72323990 + MLT1I LTR MaLR 116 402 -7 248 263 207 34 chr17 13114811 13115168 -72323312 + L1ME4a LINE L1 3427 3845 -2301 276 276 76 80 chr17 13115461 13115946 -72322534 + L1ME4a LINE L1 4077 4559 -1587 2340 90 0 29 chr17 13116830 13117141 -72321339 + AluY SINE Alu 1 302 -9 511 174 11 11 chr17 13117173 13117265 -72321215 + FRAM SINE Alu 1 92 -84 334 221 0 53 chr17 13117293 13117388 -72321092 + L1ME4a LINE L1 5583 5672 -449 683 253 134 17 chr17 13117422 13117567 -72320913 + L1ME4a LINE L1 5790 5917 -204 279 0 0 0 chr17 13117567 13117598 -72320882 + (TAGA)n Simple_repeat Simple_repeat 4 34 0 683 253 134 17 chr17 13117598 13117744 -72320736 + L1ME4a LINE L1 5917 6115 -6 195 288 41 41 chr17 13119897 13119970 -72318510 - L2 LINE L2 -93 3179 3107 2453 74 0 0 chr17 13120010 13120309 -72318171 - AluSx SINE Alu -13 299 1 346 313 30 0 chr17 13120309 13120408 -72318072 + L2 LINE L2 3192 3293 -20 246 318 45 39 chr17 13120470 13120624 -72317856 - MIR SINE MIR -5 257 103 351 353 74 23 chr17 13121573 13121831 -72316649 - L2 LINE L2 -358 2956 2686 2416 90 0 0 chr17 13124962 13125272 -72313208 + AluSg SINE Alu 1 310 0 226 286 0 0 chr17 13125406 13125476 -72313004 + MIR SINE MIR 70 139 -123 983 182 0 76 chr17 13126046 13126126 -72312354 - MER3 DNA MER1_type 0 209 125 4525 59 30 71 chr17 13126126 13126800 -72311680 + L1PA8 LINE L1 5525 6170 -2 983 182 0 76 chr17 13126800 13126944 -72311536 - MER3 DNA MER1_type -84 125 2 355 273 15 45 chr17 13127492 13127624 -72310856 + MLT1I LTR MaLR 85 212 -197 238 215 200 0 chr17 13127678 13127743 -72310737 + MLT1I LTR MaLR 332 409 0 227 246 31 15 chr17 13128226 13128291 -72310189 + GA-rich Low_complexity Low_complexity 3 68 0 252 295 0 13 chr17 13128322 13128400 -72310080 + MLT1I LTR MaLR 58 134 -275 830 214 96 5 chr17 13128537 13128724 -72309756 - MER3 DNA MER1_type -5 204 1 2209 138 3 34 chr17 13128751 13128842 -72309638 - MER7A DNA MER2_type -2695 343 251 2370 98 0 0 chr17 13128842 13129139 -72309341 + AluSx SINE Alu 1 297 -15 2209 138 3 34 chr17 13129139 13129403 -72309077 - MER7A DNA MER2_type -2787 251 1 477 280 50 20 chr17 13129828 13130028 -72308452 + MLT1H LTR MaLR 57 262 -287 2324 105 0 3 chr17 13130359 13130672 -72307808 - AluSx SINE Alu 0 312 1 301 342 26 33 chr17 13130757 13130976 -72307504 + L1M4 LINE L1 3504 3722 -2424 2165 110 7 7 chr17 13130976 13131277 -72307203 + AluSx SINE Alu 1 301 -11 301 342 26 33 chr17 13131277 13131329 -72307151 + L1M4 LINE L1 3722 3773 -2373 712 312 51 26 chr17 13131499 13131954 -72306526 - L1ME LINE L1 -382 5739 5272 2475 75 0 3 chr17 13131958 13132263 -72306217 + AluY SINE Alu 1 304 -7 2262 114 3 0 chr17 13132381 13132678 -72305802 - AluSq SINE Alu -15 298 1 348 290 140 21 chr17 13133236 13133429 -72305051 - MIR SINE MIR -28 234 19 254 280 42 49 chr17 13133536 13133679 -72304801 + HAL1 LINE L1 968 1109 -1398 1495 113 137 16 chr17 13133903 13134189 -72304291 + AluSg1 SINE Alu 1 316 0 237 324 45 0 chr17 13134466 13134577 -72303903 + HAL1 LINE L1 1577 1692 -815 511 212 37 69 chr17 13134611 13134794 -72303686 + L1ME3A LINE L1 5029 5205 -941 1642 167 9 49 chr17 13134794 13135118 -72303362 + AluJb SINE Alu 1 311 -1 511 212 37 69 chr17 13135118 13135151 -72303329 + L1ME3A LINE L1 5205 5238 -908 1764 123 46 39 chr17 13135212 13135496 -72302984 + AluJb SINE Alu 5 290 -22 601 0 56 0 chr17 13135496 13135585 -72302895 + (TAGA)n Simple_repeat Simple_repeat 4 97 0 372 200 0 0 chr17 13135585 13135665 -72302815 + (TG)n Simple_repeat Simple_repeat 2 81 0 2188 116 0 13 chr17 13135686 13135997 -72302483 + AluSx SINE Alu 1 307 -5 2223 243 27 91 chr17 13135998 13136926 -72301554 + L1ME3A LINE L1 5280 6148 -22 346 307 115 47 chr17 13136961 13137211 -72301269 + L1M4 LINE L1 2850 3082 -3064 2327 111 0 0 chr17 13137211 13137517 -72300963 + AluSp SINE Alu 1 306 -7 346 307 115 47 chr17 13137517 13137709 -72300771 + L1M4 LINE L1 3082 3322 -2824 1790 97 4 0 chr17 13138687 13138915 -72299565 - AluSp SINE Alu -21 292 64 3404 133 28 3 chr17 13139363 13139900 -72298580 - MER34B LTR ERV1 -29 536 2 570 258 240 37 chr17 13139900 13140647 -72297833 + L2 LINE L2 1755 2349 -964 1585 209 70 9 chr17 13140647 13140991 -72297489 - MLT1A1 LTR MaLR 0 365 1 570 258 240 37 chr17 13140991 13141184 -72297296 + L2 LINE L2 2349 2501 -812 2283 187 31 78 chr17 13141184 13141451 -72297029 - MER89 LTR ERV1 0 559 281 360 0 0 0 chr17 13141451 13141491 -72296989 + (TTTA)n Simple_repeat Simple_repeat 4 43 0 2164 114 0 4 chr17 13141497 13141778 -72296702 - AluSx SINE Alu -31 281 2 2283 187 31 78 chr17 13141778 13142065 -72296415 - MER89 LTR ERV1 -283 276 25 2255 104 7 0 chr17 13142065 13142362 -72296118 - AluSp SINE Alu -12 301 3 2283 187 31 78 chr17 13142362 13142386 -72296094 - MER89 LTR ERV1 -534 25 1 570 258 240 37 chr17 13142386 13142527 -72295953 + L2 LINE L2 2501 3068 -245 730 287 78 67 chr17 13142650 13143127 -72295353 + MER34 LTR ERV1 13 494 -48 2297 96 3 22 chr17 13143132 13143445 -72295035 - AluSp SINE Alu -6 307 1 1871 188 76 45 chr17 13143999 13144183 -72294297 + MLT1C LTR MaLR 3 180 -287 2084 115 0 30 chr17 13144183 13144488 -72293992 + AluSg SINE Alu 1 296 -14 1871 188 76 45 chr17 13144488 13144751 -72293729 + MLT1C LTR MaLR 180 464 -3 1713 151 13 55 chr17 13144890 13145202 -72293278 + AluJb SINE Alu 1 299 -13 1932 147 3 3 chr17 13145208 13145494 -72292986 + AluSq SINE Alu 1 286 -27 412 274 110 96 chr17 13145610 13146037 -72292443 + MLT1K LTR MaLR 140 572 -16 23 33 0 0 chr17 13146600 13146630 -72291850 + AT_rich Low_complexity Low_complexity 1 30 0 478 321 42 0 chr17 13146831 13146999 -72291481 + MIR SINE MIR 56 230 -32 1288 200 48 54 chr17 13148471 13148897 -72289583 + MER39 LTR ERV1 1 633 -74 263 229 16 0 chr17 13148993 13149054 -72289426 - LTR16C LTR ERVL -1 490 429 554 303 43 5 chr17 13149097 13149282 -72289198 - LTR16C LTR ERVL -203 288 97 1496 169 103 0 chr17 13149622 13149895 -72288585 + AluJb SINE Alu 1 301 -11 2608 122 59 2 chr17 13150546 13150955 -72287525 + MSTB1 LTR MaLR 1 432 0 240 111 0 0 chr17 13151287 13151323 -72287157 + (CA)n Simple_repeat Simple_repeat 1 36 0 1683 161 23 23 chr17 13152489 13152799 -72285681 - AluJo SINE Alu -2 310 1 183 162 0 0 chr17 13152892 13152929 -72285551 + (CA)n Simple_repeat Simple_repeat 1 37 0 213 304 13 51 chr17 13152993 13153072 -72285408 - MER91A DNA MER1_type -3 193 118 246 380 48 18 chr17 13153084 13153250 -72285230 - MER91A DNA MER1_type -25 171 1 227 258 15 15 chr17 13153643 13153709 -72284771 - L2 LINE L2 -2 3270 3205 286 280 30 20 chr17 13154950 13155050 -72283430 + MIR3 SINE MIR 108 208 0 679 286 16 4 chr17 13155057 13155259 -72283221 + L1ME LINE L1 5567 5770 -351 186 171 24 0 chr17 13155440 13155481 -72282999 + L2 LINE L2 3271 3312 -1 1628 190 28 0 chr17 13155537 13155699 -72282781 - AluJb SINE Alu -19 293 118 258 32 0 0 chr17 13155699 13155730 -72282750 + (TG)n Simple_repeat Simple_repeat 2 32 0 1628 190 28 0 chr17 13155730 13155851 -72282629 - AluJb SINE Alu -194 118 2 2433 88 3 0 chr17 13155929 13156235 -72282245 + AluSg SINE Alu 1 307 -3 755 229 57 57 chr17 13156807 13157051 -72281429 - MIR SINE MIR 0 262 19 813 287 55 10 chr17 13157140 13157429 -72281051 - L1ME3A LINE L1 -57 6113 5812 1359 217 45 0 chr17 13157432 13157722 -72280758 + MER58B DNA MER1_type 36 338 -3 657 252 124 68 chr17 13157722 13157988 -72280492 - L1ME3A LINE L1 -359 5811 5531 649 209 103 143 chr17 13157990 13158240 -72280240 - L1ME3A LINE L1 -1273 4873 4651 1542 164 21 0 chr17 13158240 13158508 -72279972 - AluSx SINE Alu 0 312 40 649 209 103 143 chr17 13158508 13158768 -72279712 - L1ME3A LINE L1 -1495 4651 4382 1436 161 30 79 chr17 13158968 13159272 -72279208 + AluJo SINE Alu 1 289 -23 2469 160 36 2 chr17 13159320 13159732 -72278748 + MSTB LTR MaLR 1 426 0 2477 97 0 0 chr17 13161147 13161457 -72277023 + AluSq SINE Alu 1 310 -3 1677 185 74 35 chr17 13162443 13162837 -72275643 + LTR52 LTR ERVL 10 418 -3 1182 247 10 24 chr17 13162866 13163162 -72275318 - MLT1D LTR MaLR -35 470 179 527 164 10 0 chr17 13163165 13163269 -72275211 + CT-rich Low_complexity Low_complexity 1 105 0 715 258 11 50 chr17 13163279 13163461 -72275019 - MLT1D LTR MaLR -426 200 26 180 77 0 0 chr17 13163481 13163507 -72274973 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 225 0 0 0 chr17 13163625 13163650 -72274830 + (GGGAA)n Simple_repeat Simple_repeat 2 26 0 905 199 29 24 chr17 13163745 13163951 -72274529 - MER6B DNA MER2_type -3 207 1 2431 250 79 42 chr17 13164075 13164160 -72274320 + MER21B LTR ERV1 13 93 -770 2343 97 0 10 chr17 13164160 13164460 -72274020 + AluSx SINE Alu 1 297 -15 2431 250 79 42 chr17 13164460 13165145 -72273335 + MER21B LTR ERV1 93 812 -51 757 134 37 159 chr17 13165203 13165382 -72273098 + LTR28 LTR ERV1 1 139 -286 1346 212 44 36 chr17 13165447 13165965 -72272515 + LTR28 LTR ERV1 416 953 -39 237 311 0 14 chr17 13166012 13166086 -72272394 + LTR28 LTR ERV1 948 1020 0 354 267 0 0 chr17 13166089 13166175 -72272305 + MIR SINE MIR 66 151 -111 228 346 17 15 chr17 13166309 13166424 -72272056 + MIR SINE MIR 61 177 -31 2129 121 3 3 chr17 13166774 13167079 -72271401 + AluSx SINE Alu 1 305 -7 299 327 108 50 chr17 13167411 13167671 -72270809 - L3 LINE CR1 -870 707 433 188 108 0 54 chr17 13169774 13169811 -72268669 + L2 LINE L2 3279 3313 0 311 206 48 0 chr17 13170005 13170068 -72268412 + L1ME4a LINE L1 4088 4153 -1993 505 284 73 14 chr17 13170083 13170301 -72268179 - MIR SINE MIR -30 232 2 1813 165 34 3 chr17 13170514 13170805 -72267675 + AluJb SINE Alu 1 300 -12 1623 164 33 33 chr17 13170948 13171253 -72267227 - AluJo SINE Alu -5 307 3 243 306 106 31 chr17 13171344 13171703 -72266777 + L1ME4a LINE L1 4457 4871 -1275 360 0 0 0 chr17 13171703 13171743 -72266737 + (TA)n Simple_repeat Simple_repeat 1 40 0 243 306 106 31 chr17 13171743 13171922 -72266558 + L1ME4a LINE L1 4871 5035 -1111 2229 116 3 0 chr17 13172137 13172431 -72266049 + AluSx SINE Alu 1 295 -17 801 110 0 0 chr17 13172774 13172883 -72265597 + AluSp/q SINE Alu 183 291 -22 501 266 90 62 chr17 13172900 13172972 -72265508 + L1ME4a LINE L1 5714 5783 -338 2274 110 0 0 chr17 13172972 13173271 -72265209 + AluSc SINE Alu 1 299 -10 501 266 90 62 chr17 13173271 13173400 -72265080 + L1ME4a LINE L1 5783 5907 -214 761 221 67 15 chr17 13173400 13173595 -72264885 + MER3 DNA MER1_type 5 209 0 501 266 90 62 chr17 13173595 13173715 -72264765 + L1ME4a LINE L1 5907 6045 -76 23 0 0 0 chr17 13173739 13173762 -72264718 + AT_rich Low_complexity Low_complexity 1 23 0 2201 103 3 0 chr17 13173762 13174053 -72264427 - AluSg SINE Alu -18 292 1 2385 83 3 0 chr17 13174792 13175094 -72263386 - AluSq SINE Alu -10 303 1 2190 126 93 18 chr17 13175614 13175794 -72262686 + MSTA LTR MaLR 1 166 -262 2111 109 0 3 chr17 13175794 13176077 -72262403 + AluSq SINE Alu 24 305 -8 2190 126 93 18 chr17 13176077 13176294 -72262186 + MSTA LTR MaLR 166 428 0 2122 123 0 0 chr17 13176488 13176764 -72261716 + AluSx SINE Alu 1 276 -36 180 0 0 0 chr17 13176767 13176787 -72261693 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 1058 262 27 46 chr17 13177107 13177403 -72261077 - L1ME1 LINE L1 -51 6115 5826 2394 95 0 0 chr17 13177403 13177709 -72260771 - AluSx SINE Alu -6 306 1 1058 262 27 46 chr17 13177709 13177779 -72260701 - L1ME1 LINE L1 -340 5826 5756 856 233 32 60 chr17 13179110 13179275 -72259205 + MIR SINE MIR 13 170 -92 2114 124 7 0 chr17 13179275 13179573 -72258907 + AluSc SINE Alu 1 300 -9 856 233 32 60 chr17 13179573 13179656 -72258824 + MIR SINE MIR 170 254 -8 2355 101 0 19 chr17 13179765 13180081 -72258399 + AluSx SINE Alu 1 310 -2 21 0 0 0 chr17 13180552 13180573 -72257907 + AT_rich Low_complexity Low_complexity 1 21 0 1803 213 17 8 chr17 13180997 13181359 -72257121 - MLT1A1 LTR MaLR 0 365 1 278 363 31 38 chr17 13181749 13181909 -72256571 + MIR3 SINE MIR 38 196 -12 1870 179 3 0 chr17 13181973 13182280 -72256200 - AluJo SINE Alu -3 309 2 2337 72 28 0 chr17 13182461 13182752 -72255728 + AluY SINE Alu 1 299 -12 211 227 0 0 chr17 13182904 13182948 -72255532 + T-rich Low_complexity Low_complexity 6 49 0 2150 110 24 0 chr17 13183634 13183925 -72254555 + AluSq SINE Alu 1 298 -15 337 344 0 16 chr17 13184079 13184204 -72254276 - MIR SINE MIR -95 167 45 1935 153 10 13 chr17 13184448 13184749 -72253731 + AluJo SINE Alu 1 300 -12 698 278 43 16 chr17 13184903 13185158 -72253322 + MIR SINE MIR 1 262 0 233 222 63 0 chr17 13185204 13185267 -72253213 - L2 LINE L2 -74 3239 3173 1033 189 39 0 chr17 13185306 13185486 -72252994 - MER5A DNA MER1_type -1 188 2 463 200 9 9 chr17 13187152 13187262 -72251218 - MER5A DNA MER1_type -77 112 3 2228 116 0 0 chr17 13187941 13188235 -72250245 - AluSg SINE Alu -15 295 2 2329 97 10 3 chr17 13189615 13189925 -72248555 + AluSq SINE Alu 1 312 -1 2443 146 13 87 chr17 13190261 13190721 -72247759 + MSTB LTR MaLR 1 426 0 601 216 42 28 chr17 13191093 13191268 -72247212 - MER21B LTR ERV1 -85 804 621 * 2891 153 46 4 chr17 13191266 13191744 -72246736 + MER41E LTR ERV1 15 512 0 1691 249 71 35 chr17 13191745 13192266 -72246214 - MER21B LTR ERV1 -323 540 1 347 215 8 85 chr17 13192276 13192406 -72246074 - MER112 DNA MER1_type -136 124 5 2348 161 5 22 chr17 13192476 13192881 -72245599 - MER57A LTR ERV1 -4 399 2 660 195 23 8 chr17 13192889 13193017 -72245463 + MLT2E LTR ERVL 452 581 -47 252 254 18 0 chr17 13193162 13193217 -72245263 - L2 LINE L2 -220 3052 2997 341 161 65 0 chr17 13193433 13193495 -72244985 + L1MCc LINE L1 857 922 -5501 674 303 60 23 chr17 13193584 13193950 -72244530 - LTR16A LTR ERVL -9 441 16 1056 331 34 27 chr17 13194230 13194674 -72243806 + MLT1K LTR MaLR 7 453 -135 2559 152 27 0 chr17 13194674 13195082 -72243398 - MSTB1 LTR MaLR -13 419 1 2285 118 0 13 chr17 13195449 13195764 -72242716 + AluSx SINE Alu 1 311 -1 1282 214 78 96 chr17 13195819 13195936 -72242544 - MER34 LTR ERV1 -2 540 422 1926 160 3 31 chr17 13195936 13196254 -72242226 - AluSx SINE Alu -3 309 1 1282 214 78 96 chr17 13196254 13196686 -72241794 - MER34 LTR ERV1 -120 422 1 642 269 17 6 chr17 13196801 13196976 -72241504 + MIR SINE MIR 56 232 -30 1026 201 110 3 chr17 13197186 13197602 -72240878 + MLT1D LTR MaLR 21 505 0 435 294 43 2 chr17 13197640 13197831 -72240649 + L1ME2 LINE L1 5966 6161 -5 295 311 36 36 chr17 13197931 13197974 -72240506 - MIR3 SINE MIR -39 169 127 2093 194 71 20 chr17 13197974 13198412 -72240068 - LOR1b LTR ERV1 0 461 2 295 311 36 36 chr17 13198412 13198535 -72239945 - MIR3 SINE MIR -80 128 3 2327 120 14 3 chr17 13198731 13199082 -72239398 + THE1A LTR MaLR 1 355 0 524 154 0 0 chr17 13200644 13200735 -72237745 + MER5A DNA MER1_type 43 133 -56 2185 106 21 0 chr17 13200738 13201021 -72237459 - AluSg SINE Alu -21 289 1 297 0 0 0 chr17 13201558 13201591 -72236889 + (T)n Simple_repeat Simple_repeat 1 33 0 325 254 111 55 chr17 13201795 13202012 -72236468 + MER102a DNA MER1_type 100 328 -2 323 318 68 0 chr17 13202301 13202389 -72236091 + L2 LINE L2 3138 3231 -41 314 192 19 19 chr17 13202407 13202511 -72235969 + GA-rich Low_complexity Low_complexity 3 106 0 420 220 105 0 chr17 13202518 13202639 -72235841 - MER117 DNA MER1_type -54 143 11 298 286 0 0 chr17 13204279 13204356 -72234124 + MIR SINE MIR 186 262 0 1835 187 29 3 chr17 13204556 13204903 -72233577 + MLT2D LTR ERVL 1 356 -58 2072 103 0 77 chr17 13204927 13205238 -72233242 + AluSx SINE Alu 1 287 -25 23 0 0 0 chr17 13205251 13205274 -72233206 + AT_rich Low_complexity Low_complexity 1 23 0 280 135 27 0 chr17 13205280 13205354 -72233126 + (TCTA)n Simple_repeat Simple_repeat 3 78 0 238 311 14 0 chr17 13205580 13205654 -72232826 + MER117 DNA MER1_type 2 76 -121 2022 141 0 0 chr17 13205699 13206009 -72232471 + AluSx SINE Alu 1 310 0 1331 304 80 31 chr17 13206130 13206929 -72231551 + L2 LINE L2 1949 2786 -528 331 205 25 16 chr17 13207060 13207182 -72231298 + GA-rich Low_complexity Low_complexity 1 123 0 2053 135 0 0 chr17 13207183 13207643 -72230837 + AluSx SINE Alu 1 460 0 471 256 12 17 chr17 13207644 13208049 -72230431 + GA-rich Low_complexity Low_complexity 1 403 0 196 294 0 0 chr17 13208097 13208148 -72230332 - MIR SINE MIR -134 128 78 887 149 7 7 chr17 13208396 13208702 -72229778 + (CA)n Simple_repeat Simple_repeat 1 306 0 440 329 67 33 chr17 13209258 13209498 -72228982 + MIR SINE MIR 11 258 -4 186 387 51 15 chr17 13209511 13209648 -72228832 + L2 LINE L2 2913 3054 -218 1832 59 18 0 chr17 13209652 13209872 -72228608 - AluSg/x SINE Alu -6 304 81 1758 167 17 47 chr17 13209872 13210231 -72228249 + MLT1B LTR MaLR 27 374 -16 2138 174 34 15 chr17 13210435 13210725 -72227755 - Tigger3(Golem) DNA MER2_type 0 3028 2725 2209 102 0 7 chr17 13210725 13211142 -72227338 + AluSp SINE Alu 3 417 0 2138 174 34 15 chr17 13211142 13211257 -72227223 - Tigger3(Golem) DNA MER2_type -303 2725 2614 2376 94 0 0 chr17 13211257 13211554 -72226926 - AluSx SINE Alu -15 297 1 387 214 0 41 chr17 13212244 13212342 -72226138 + MLT1H LTR MaLR 58 151 -398 389 245 59 0 chr17 13212965 13213067 -72225413 - L2 LINE L2 -16 3297 3190 1747 135 0 97 chr17 13213434 13213682 -72224798 - AluJo SINE Alu -2 310 102 2327 107 0 0 chr17 13213682 13213981 -72224499 - AluSx SINE Alu -13 299 1 1747 135 0 97 chr17 13213981 13214073 -72224407 - AluJo SINE Alu -210 102 3 338 281 135 60 chr17 13214764 13214949 -72223531 - MIR SINE MIR -8 254 56 914 130 7 0 chr17 13215003 13215166 -72223314 - AluSg/x SINE Alu 0 306 143 21 36 0 0 chr17 13216441 13216469 -72222011 + AT_rich Low_complexity Low_complexity 1 28 0 198 0 0 0 chr17 13216911 13216933 -72221547 + (T)n Simple_repeat Simple_repeat 1 22 0 1507 153 33 12 chr17 13216935 13217176 -72221304 - AluJo SINE Alu -66 246 1 240 227 227 0 chr17 13217564 13217639 -72220841 - MER96 DNA MER1_type? -81 94 3 487 228 67 83 chr17 13218061 13218254 -72220226 + MIR SINE MIR 73 262 0 454 292 197 28 chr17 13218371 13219057 -72219423 + L2 LINE L2 2503 3311 -2 2092 97 4 4 chr17 13219365 13219633 -72218847 - AluSc SINE Alu -7 302 35 2284 106 7 0 chr17 13223210 13223502 -72214978 + AluSg SINE Alu 1 294 -16 2257 110 7 7 chr17 13223670 13223970 -72214510 - AluSx SINE Alu -12 300 1 30 59 0 0 chr17 13224573 13224624 -72213856 + AT_rich Low_complexity Low_complexity 1 51 0 2408 84 0 7 chr17 13225151 13225449 -72213031 - AluSc SINE Alu -13 296 1 2170 135 3 0 chr17 13225449 13225760 -72212720 - AluSx SINE Alu 0 312 1 2091 121 0 0 chr17 13225771 13226079 -72212401 - AluSx SINE Alu 0 312 5 2263 87 37 3 chr17 13226541 13226839 -72211641 - AluY SINE Alu -3 308 1 2415 86 7 0 chr17 13227286 13227590 -72210890 - AluSp SINE Alu -7 306 1 257 268 0 37 chr17 13229573 13229655 -72208825 + L1ME4a LINE L1 5966 6044 -77 526 269 133 45 chr17 13229669 13229978 -72208502 - LTR16B LTR ERVL -9 455 120 677 230 23 17 chr17 13231442 13231616 -72206864 - MER58A DNA MER1_type -3 221 47 276 207 52 0 chr17 13231749 13231807 -72206673 - L1ME4a LINE L1 -82 6039 5979 387 305 70 5 chr17 13231907 13232107 -72206373 - L1ME4a LINE L1 -374 5747 5535 2260 65 18 4 chr17 13232136 13232465 -72206015 - AluSq SINE Alu 0 333 1 355 273 112 19 chr17 13232700 13232861 -72205619 + MER5B DNA MER1_type 1 176 -2 186 323 16 0 chr17 13232880 13232942 -72205538 + MER5A DNA MER1_type 38 100 -89 558 239 103 22 chr17 13233011 13233195 -72205285 + MER20 DNA MER1_type 4 202 -17 195 244 35 81 chr17 13233696 13233722 -72204758 + MER5B DNA MER1_type 38 64 -114 2447 65 3 0 chr17 13233722 13234013 -72204467 + AluY SINE Alu 1 292 -19 195 244 35 81 chr17 13234013 13234072 -72204408 + MER5B DNA MER1_type 64 119 -59 243 231 0 62 chr17 13234225 13234290 -72204190 + MIR SINE MIR 22 82 -180 2080 191 43 5 chr17 13234658 13235098 -72203382 - MSTB2 LTR MaLR 0 457 1 368 314 66 0 chr17 13235534 13235671 -72202809 - MIR SINE MIR -65 197 52 182 230 40 70 chr17 13235945 13236045 -72202435 - L2 LINE L2 -111 3202 3106 231 333 80 22 chr17 13236362 13236500 -72201980 + MER5B DNA MER1_type 1 146 -32 248 0 0 30 chr17 13241526 13241559 -72196921 + (CAAT)n Simple_repeat Simple_repeat 3 34 0 287 24 0 24 chr17 13241791 13241832 -72196648 + (TAAG)n Simple_repeat Simple_repeat 2 41 0 2303 85 0 67 chr17 13244553 13244882 -72193598 - AluSq SINE Alu -6 307 1 300 244 143 25 chr17 13245297 13245416 -72193064 + MIR SINE MIR 19 151 -111 1247 87 50 3 chr17 13246976 13247197 -72191283 - AluSc SINE Alu -1 308 2 200 111 28 0 chr17 13247767 13247803 -72190677 + (TG)n Simple_repeat Simple_repeat 2 38 0 2500 78 3 0 chr17 13249848 13250156 -72188324 - AluSp SINE Alu -4 309 1 2544 76 0 0 chr17 13250392 13250695 -72187785 - AluY SINE Alu -8 303 1 226 351 149 12 chr17 13250859 13251027 -72187453 + MIR SINE MIR 20 210 -52 24 0 0 0 chr17 13251345 13251369 -72187111 + AT_rich Low_complexity Low_complexity 1 24 0 2047 130 7 3 chr17 13251658 13251950 -72186530 - AluSq SINE Alu -20 293 1 2476 88 0 0 chr17 13251981 13252278 -72186202 + AluSq SINE Alu 1 297 -16 2317 97 10 0 chr17 13254691 13255000 -72183480 + AluSx SINE Alu 1 312 0 537 105 12 0 chr17 13255622 13255708 -72182772 - Alu SINE Alu -3 307 221 2357 237 53 33 chr17 13256051 13256365 -72182115 - L1ME2 LINE L1 -108 6056 5750 1795 147 136 16 chr17 13256365 13256806 -72181674 + LTR54B LTR ERV1 1 494 -4 2357 237 53 33 chr17 13256806 13257296 -72181184 - L1ME2 LINE L1 -414 5750 5236 2321 99 0 3 chr17 13257308 13257611 -72180869 - AluSg SINE Alu -8 302 1 677 315 134 39 chr17 13258713 13259094 -72179386 + L1M4 LINE L1 2353 2696 -3450 2406 57 7 3 chr17 13259094 13259394 -72179086 - AluY SINE Alu -10 301 1 677 315 134 39 chr17 13259394 13259746 -72178734 + L1M4 LINE L1 2696 3013 -3133 1753 205 0 0 chr17 13259746 13260058 -72178422 + AluJo SINE Alu 1 312 0 677 315 134 39 chr17 13260058 13260355 -72178125 + L1M4 LINE L1 3013 3482 -2664 328 198 87 0 chr17 13260634 13260760 -72177720 + L1MC/D LINE L1 5295 5431 -2377 31 58 0 0 chr17 13260850 13260902 -72177578 + AT_rich Low_complexity Low_complexity 1 52 0 2347 71 3 0 chr17 13260973 13261279 -72177201 - AluSp SINE Alu 0 307 1 754 313 111 48 chr17 13261388 13262117 -72176363 - L2 LINE L2 -2 3311 2522 23 0 0 0 chr17 13262139 13262162 -72176318 + AT_rich Low_complexity Low_complexity 1 23 0 3223 150 16 3 chr17 13262164 13262729 -72175751 - L1MA6 LINE L1 0 6300 5729 2039 159 42 16 chr17 13262730 13263108 -72175372 - MER61D LTR ERV1 0 501 114 4508 32 0 0 chr17 13263160 13263904 -72174576 - L1PA4 LINE L1 -342 5813 5070 2924 45 0 0 chr17 13263904 13264253 -72174227 + L1PA4 LINE L1 5802 6155 0 10996 116 14 12 chr17 13264254 13266332 -72172148 - MER61D-int LTR ERV1 -11 5206 3055 2756 160 63 49 chr17 13266316 13267935 -72170545 - MER61D-int LTR ERV1 -2791 2426 511 * 2328 149 63 0 chr17 13268031 13268267 -72170213 - L1MA6 LINE L1 -566 5734 5514 272 27 27 0 chr17 13268267 13268304 -72170176 + (TTTTG)n Simple_repeat Simple_repeat 2 39 0 2328 149 63 0 chr17 13268304 13268564 -72169916 - L1MA6 LINE L1 -786 5514 5196 343 299 33 33 chr17 13268580 13268791 -72169689 - L1MC4a LINE L1 -1885 5923 5713 385 285 47 101 chr17 13268975 13269099 -72169381 + L1M4 LINE L1 3918 4047 -2099 2243 98 7 0 chr17 13269099 13269278 -72169202 - AluY SINE Alu -3 308 125 279 0 0 0 chr17 13269278 13269309 -72169171 + (TG)n Simple_repeat Simple_repeat 2 32 0 2243 98 7 0 chr17 13269309 13269435 -72169045 - AluY SINE Alu -186 125 1 385 285 47 101 chr17 13269435 13269587 -72168893 + L1M4 LINE L1 4047 4179 -1967 29 28 0 0 chr17 13269709 13269745 -72168735 + AT_rich Low_complexity Low_complexity 1 36 0 1855 162 11 0 chr17 13270044 13270361 -72168119 - AluSx SINE Alu 0 322 3 22 0 0 0 chr17 13270403 13270425 -72168055 + AT_rich Low_complexity Low_complexity 1 22 0 338 311 114 8 chr17 13270430 13270562 -72167918 - L1M4b LINE L1 -5916 943 798 539 185 0 0 chr17 13270579 13270671 -72167809 - FLAM SINE Alu -13 130 39 3224 196 25 56 chr17 13270722 13270759 -72167721 + L1MB7 LINE L1 5314 5351 -833 216 0 0 0 chr17 13270759 13270783 -72167697 + (ATATG)n Simple_repeat Simple_repeat 2 25 0 3224 196 25 56 chr17 13270783 13271632 -72166848 + L1MB7 LINE L1 5351 6172 -12 2237 198 120 112 chr17 13271652 13272073 -72166407 + L1MD3 LINE L1 6675 7091 -904 261 266 0 43 chr17 13272073 13272167 -72166313 + MLT1F1 LTR MaLR 35 124 -443 2237 198 120 112 chr17 13272167 13272746 -72165734 + L1MD3 LINE L1 7091 7989 -6 412 294 67 53 chr17 13272823 13273201 -72165279 + L1MC4a LINE L1 3595 3966 -2180 180 0 0 0 chr17 13273201 13273221 -72165259 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 3877 97 21 0 chr17 13273221 13273789 -72164691 - L1MA2 LINE L1 -10 6294 5715 412 294 67 53 chr17 13273789 13273899 -72164581 + L1MC4a LINE L1 3965 4091 -2055 324 270 31 55 chr17 13273921 13273982 -72164498 + L1MC4a LINE L1 5733 5794 -2014 2143 191 109 27 chr17 13273982 13274506 -72163974 - MLT1F1 LTR MaLR 0 567 1 324 270 31 55 chr17 13274506 13274607 -72163873 + L1MC4a LINE L1 5794 5891 -1917 1862 108 194 19 chr17 13274865 13275225 -72163255 + MSTA LTR MaLR 5 427 -1 236 263 12 25 chr17 13275901 13275981 -72162499 - MLT1J2 LTR MaLR -314 136 58 1127 229 123 54 chr17 13276349 13276811 -72161669 + MLT1D LTR MaLR 3 496 -9 650 277 62 32 chr17 13277523 13277765 -72160715 + MIR SINE MIR 10 256 -6 363 302 79 16 chr17 13278338 13278527 -72159953 - L2 LINE L2 -39 3274 3074 472 275 0 14 chr17 13279433 13279575 -72158905 - MER117 DNA MER1_type -51 146 7 1172 199 146 12 chr17 13279802 13280124 -72158356 + MLT1A1 LTR MaLR 1 365 0 1586 149 15 79 chr17 13280211 13280540 -72157940 - AluJo SINE Alu -3 309 2 343 284 60 49 chr17 13280570 13280753 -72157727 + MIR3 SINE MIR 17 201 -7 1919 9 5 14 chr17 13281872 13282093 -72156387 + AluYa5 SINE Alu 93 311 0 1581 218 88 38 chr17 13282263 13282740 -72155740 + MLT1D LTR MaLR 5 505 0 2781 245 81 92 chr17 13282770 13284617 -72153863 + Charlie2b DNA MER1_type 2 1828 -954 3812 173 82 47 chr17 13284826 13285610 -72152870 + L1MC1 LINE L1 20 844 -5582 202 0 91 0 chr17 13285610 13285643 -72152837 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 3812 173 82 47 chr17 13285643 13285803 -72152677 + L1MC1 LINE L1 844 997 -5429 5351 191 37 14 chr17 13285877 13287181 -72151299 + L1MC1 LINE L1 4700 6070 -543 2174 95 0 3 chr17 13287181 13287516 -72150964 + AluSg SINE Alu 1 334 0 5351 191 37 14 chr17 13287516 13288073 -72150407 + L1MC1 LINE L1 6070 6613 0 2435 243 89 21 chr17 13288110 13289107 -72149373 - L1M4 LINE L1 -1622 4524 3451 1882 168 3 7 chr17 13289107 13289410 -72149070 - AluJo SINE Alu -8 304 3 2435 243 89 21 chr17 13289410 13289462 -72149018 - L1M4 LINE L1 -2695 3451 3404 362 378 27 11 chr17 13289718 13289906 -72148574 + L2 LINE L2 1037 1227 -2087 1110 100 0 0 chr17 13289976 13290164 -72148316 + AluSp SINE Alu 134 321 0 384 355 63 37 chr17 13290172 13290555 -72147925 + L2 LINE L2 1297 1689 -1625 764 150 0 0 chr17 13290948 13291081 -72147399 + L1MA5 LINE L1 6166 6298 -2 303 286 104 54 chr17 13291412 13291692 -72146788 + L1 LINE L1 3006 3299 -2847 316 274 14 68 chr17 13291952 13292098 -72146382 + L1 LINE L1 3647 3784 -2362 977 204 56 0 chr17 13292263 13292459 -72146021 + Tigger7 DNA MER2_type 3 209 -2278 1506 119 211 54 chr17 13292461 13292831 -72145649 - MSTA LTR MaLR 0 428 1 837 168 63 0 chr17 13292837 13293027 -72145453 + Tigger7 DNA MER2_type 2322 2523 -64 306 272 76 0 chr17 13293027 13293119 -72145361 + Tigger7 DNA MER2_type 2383 2481 -6 23 33 0 0 chr17 13293196 13293226 -72145254 + AT_rich Low_complexity Low_complexity 1 30 0 1998 92 4 11 chr17 13293266 13293539 -72144941 - AluSx SINE Alu -5 307 37 1267 256 20 10 chr17 13293586 13293883 -72144597 + AluJo SINE Alu 1 300 -12 218 328 0 0 chr17 13293955 13294019 -72144461 + (TATG)n Simple_repeat Simple_repeat 4 67 0 399 335 53 29 chr17 13294050 13294259 -72144221 + MIR SINE MIR 36 249 -13 26 30 0 0 chr17 13294440 13294473 -72144007 + AT_rich Low_complexity Low_complexity 1 33 0 484 341 105 11 chr17 13294532 13294884 -72143596 + L1ME4a LINE L1 5560 5944 -177 272 231 48 39 chr17 13296181 13296285 -72142195 + MER103 DNA DNA 2 106 -60 215 185 0 19 chr17 13296889 13296943 -72141537 + GA-rich Low_complexity Low_complexity 4 56 0 2648 99 16 11 chr17 13298360 13298733 -72139747 - THE1C LTR MaLR 0 375 1 9401 125 62 9 chr17 13298733 13300231 -72138249 - THE1C-int LTR MaLR 0 1580 3 2613 98 16 19 chr17 13300233 13300609 -72137871 - THE1C LTR MaLR 0 375 1 347 266 29 54 chr17 13301189 13301328 -72137152 + MIR SINE MIR 16 149 -59 23 0 0 0 chr17 13301422 13301445 -72137035 + AT_rich Low_complexity Low_complexity 1 23 0 235 275 142 40 chr17 13301533 13301692 -72136788 - MER5A DNA MER1_type 0 189 3 332 122 47 19 chr17 13303160 13303267 -72135213 + (CA)n Simple_repeat Simple_repeat 2 111 0 198 0 0 0 chr17 13303327 13303349 -72135131 + (CA)n Simple_repeat Simple_repeat 2 23 0 330 239 40 23 chr17 13303397 13303573 -72134907 + (CA)n Simple_repeat Simple_repeat 2 180 0 464 227 7 97 chr17 13304162 13304316 -72134164 + MIR SINE MIR 72 211 -51 299 360 47 7 chr17 13304374 13304524 -72133956 + L3 LINE CR1 1210 1365 -212 201 320 0 0 chr17 13304544 13304594 -72133886 - L2 LINE L2 -13 3259 3210 266 354 58 35 chr17 13304634 13304974 -72133506 - L2 LINE L2 -236 3036 2694 468 311 171 4 chr17 13305948 13306199 -72132281 - MLT1L LTR MaLR -8 607 315 619 175 9 35 chr17 13306381 13306495 -72131985 - MER81 DNA DNA -1 113 3 812 214 287 62 chr17 13306719 13307120 -72131360 - MLT1E2 LTR MaLR -51 603 52 220 154 39 0 chr17 13307180 13307232 -72131248 + (TG)n Simple_repeat Simple_repeat 2 55 0 2196 115 0 0 chr17 13307258 13307546 -72130934 - AluSg1 SINE Alu -21 288 1 6528 100 12 0 chr17 13307553 13308649 -72129831 - L1PA14 LINE L1 0 6161 5070 450 351 96 0 chr17 13308690 13308878 -72129602 + L3 LINE CR1 1370 1575 -2 278 294 20 20 chr17 13310004 13310106 -72128374 - MIR SINE MIR -146 116 15 553 303 56 54 chr17 13310215 13310428 -72128052 - L3 LINE CR1 -11 1566 1350 2193 110 0 3 chr17 13310428 13310728 -72127752 - AluSg SINE Alu -7 303 5 553 303 56 54 chr17 13310728 13310904 -72127576 - L3 LINE CR1 -227 1350 1176 1612 128 21 21 chr17 13311033 13311275 -72127205 - AluSx SINE Alu -70 242 1 3862 214 42 74 chr17 13311275 13312530 -72125950 + L1MC4a LINE L1 6554 7707 -101 2039 131 10 0 chr17 13312640 13312931 -72125549 + AluSx SINE Alu 1 294 -18 207 100 0 0 chr17 13312956 13312986 -72125494 + (T)n Simple_repeat Simple_repeat 1 30 0 2460 77 3 0 chr17 13313004 13313304 -72125176 - AluSp SINE Alu -12 301 1 25 51 0 0 chr17 13313314 13313353 -72125127 + AT_rich Low_complexity Low_complexity 1 39 0 33 56 0 0 chr17 13313694 13313748 -72124732 + AT_rich Low_complexity Low_complexity 1 54 0 28 29 0 0 chr17 13313940 13313975 -72124505 + AT_rich Low_complexity Low_complexity 1 35 0 2226 118 0 0 chr17 13313986 13314282 -72124198 + AluSx SINE Alu 1 296 -16 21 0 0 0 chr17 13315159 13315180 -72123300 + AT_rich Low_complexity Low_complexity 1 21 0 2481 53 3 3 chr17 13315181 13315483 -72122997 + AluY SINE Alu 1 302 -9 180 0 0 0 chr17 13316324 13316344 -72122136 + (TC)n Simple_repeat Simple_repeat 1 20 0 * 258 32 0 0 chr17 13316343 13316374 -72122106 + (CA)n Simple_repeat Simple_repeat 1 31 0 247 200 20 0 chr17 13316445 13316495 -72121985 + CT-rich Low_complexity Low_complexity 2 52 0 22 0 0 0 chr17 13316586 13316608 -72121872 + AT_rich Low_complexity Low_complexity 1 22 0 2009 132 4 0 chr17 13316657 13316966 -72121514 - AluSx SINE Alu 0 310 1 238 282 87 26 chr17 13316966 13317128 -72121352 - L1ME LINE L1 -297 5873 5705 538 271 8 0 chr17 13317218 13317347 -72121133 - MER58B DNA MER1_type -31 310 181 1563 208 10 7 chr17 13318282 13318590 -72119890 + AluJo SINE Alu 2 310 -2 696 56 0 0 chr17 13318610 13318699 -72119781 + (GGAA)n Simple_repeat Simple_repeat 2 90 0 374 304 47 14 chr17 13318750 13318837 -72119643 + MIR SINE MIR 66 161 -101 2316 97 7 0 chr17 13318837 13319137 -72119343 + AluSp SINE Alu 1 302 -11 374 304 47 14 chr17 13319137 13319197 -72119283 + MIR SINE MIR 161 218 -44 203 355 190 8 chr17 13319344 13319465 -72119015 + L2 LINE L2 3128 3270 -2 345 278 142 6 chr17 13319520 13319689 -72118791 + HAL1 LINE L1 1606 1797 -710 698 109 9 0 chr17 13319689 13319799 -72118681 + (GAAA)n Simple_repeat Simple_repeat 4 114 0 24 32 0 0 chr17 13320212 13320243 -72118237 + AT_rich Low_complexity Low_complexity 1 31 0 1674 172 0 34 chr17 13320452 13320749 -72117731 + AluJo SINE Alu 5 291 -21 25 31 0 0 chr17 13320887 13320919 -72117561 + AT_rich Low_complexity Low_complexity 1 32 0 1774 131 73 7 chr17 13321136 13321410 -72117070 + AluSx SINE Alu 3 294 -18 2295 104 0 0 chr17 13321797 13322106 -72116374 - AluSc SINE Alu 0 309 1 2573 58 0 3 chr17 13322509 13322818 -72115662 - AluY SINE Alu -3 308 1 376 297 65 19 chr17 13322819 13322974 -72115506 + L3 LINE CR1 1192 1353 -224 279 270 27 0 chr17 13325482 13325556 -72112924 - MIR SINE MIR -94 168 93 872 259 78 53 chr17 13325643 13326077 -72112403 + MER39 LTR ERV1 69 706 -1 1810 142 3 86 chr17 13326202 13326539 -72111941 + AluSx SINE Alu 1 309 -3 2214 88 21 0 chr17 13326821 13327104 -72111376 + AluSc SINE Alu 1 289 -20 398 174 128 0 chr17 13327164 13327248 -72111232 - MER34 LTR ERV1 -3 539 445 577 169 92 39 chr17 13327248 13327378 -72111102 + Tigger1 DNA MER2_type 1 137 -2281 * 1267 143 14 5 chr17 13327376 13327592 -72110888 + Tigger1 DNA MER2_type 2200 2417 -1 1499 211 145 8 chr17 13327594 13327703 -72110777 - MER34 LTR ERV1 -95 447 354 3843 53 0 7 chr17 13327703 13328158 -72110322 + L1PA5 LINE L1 5703 6154 0 1499 211 145 8 chr17 13328158 13328441 -72110039 - MER34 LTR ERV1 -188 354 1 1946 112 95 0 chr17 13328463 13328748 -72109732 + AluSx SINE Alu 1 312 0 3971 159 28 14 chr17 13328919 13329638 -72108842 + L1MA7 LINE L1 5558 6286 -5 1436 219 0 32 chr17 13329639 13329950 -72108530 + AluJo SINE Alu 1 301 -11 2027 111 7 14 chr17 13329963 13330252 -72108228 - AluSc SINE Alu -22 287 1 2122 125 0 14 chr17 13330955 13331250 -72107230 - AluSx SINE Alu -21 291 1 1801 161 27 3 chr17 13331501 13331800 -72106680 - AluJo SINE Alu -1 311 6 2132 134 0 10 chr17 13332680 13332987 -72105493 + AluSx SINE Alu 1 304 -8 2150 116 3 0 chr17 13333754 13334048 -72104432 + AluSq SINE Alu 1 295 -18 1325 186 25 41 chr17 13334132 13334449 -72104031 + L1MB4 LINE L1 5671 5982 -202 1043 250 87 40 chr17 13334454 13334959 -72103521 + MER39 LTR ERV1 4 565 0 697 179 150 0 chr17 13334961 13335134 -72103346 + L1MB4 LINE L1 5982 6180 0 377 328 58 11 chr17 13335335 13335509 -72102971 + MIR SINE MIR 36 217 -45 1692 144 24 10 chr17 13335578 13335875 -72102605 + MER89 LTR ERV1 1 301 -258 380 209 55 86 chr17 13335875 13336038 -72102442 - MER34C LTR ERV1 0 585 428 1909 151 37 37 chr17 13336143 13336520 -72101960 - MER66B LTR ERV1 -1 485 109 226 245 0 0 chr17 13336517 13336566 -72101914 - MER89 LTR ERV1 -214 345 297 * 835 184 162 43 chr17 13336565 13336843 -72101637 + MER34C LTR ERV1 37 347 -238 943 247 134 59 chr17 13336854 13336870 -72101610 + MER34 LTR ERV1 9 22 -520 2625 137 46 19 chr17 13336870 13337287 -72101193 - MSTA LTR MaLR 0 428 1 943 247 134 59 chr17 13337287 13337748 -72100732 + MER34 LTR ERV1 22 522 -20 440 195 13 0 chr17 13337754 13337831 -72100649 + MER66B LTR ERV1 27 104 -382 445 153 0 0 chr17 13337838 13337910 -72100570 + MER89 LTR ERV1 476 547 -12 21 57 0 0 chr17 13338569 13338604 -72099876 + AT_rich Low_complexity Low_complexity 1 35 0 1660 139 4 54 chr17 13339357 13339571 -72098909 + MER57A LTR ERV1 1 200 -203 1861 143 21 0 chr17 13339571 13339880 -72098600 - AluJb SINE Alu 0 315 1 1660 139 4 54 chr17 13339880 13339944 -72098536 + MER57A LTR ERV1 200 266 -137 2092 94 59 3 chr17 13340289 13340576 -72097904 + AluSg1 SINE Alu 1 303 -6 3065 131 6 17 chr17 13340590 13341033 -72097447 + MER31A LTR ERV1 1 440 -45 2186 122 35 67 chr17 13341033 13341409 -72097071 + THE1B LTR MaLR 1 364 0 3065 131 6 17 chr17 13341409 13341447 -72097033 + MER31A LTR ERV1 440 477 -8 482 278 99 40 chr17 13341465 13341688 -72096792 + MIR SINE MIR 17 252 -10 262 244 73 12 chr17 13341693 13341775 -72096705 - MIR3 SINE MIR -1 207 121 21 95 0 0 chr17 13343379 13343442 -72095038 + AT_rich Low_complexity Low_complexity 1 63 0 2783 153 16 23 chr17 13343909 13344346 -72094134 - Tigger2a DNA MER2_type 0 434 1 458 294 91 38 chr17 13344687 13345027 -72093453 + L1M4 LINE L1 3071 3428 -2718 2480 85 0 0 chr17 13345295 13345600 -72092880 + AluSg SINE Alu 1 305 -5 26 74 0 0 chr17 13345760 13345814 -72092666 + AT_rich Low_complexity Low_complexity 1 54 0 347 188 12 0 chr17 13346250 13346330 -72092150 - L2 LINE L2 -1618 1696 1616 663 279 140 52 chr17 13346333 13346946 -72091534 - L2 LINE L2 -1117 2197 1531 204 376 66 33 chr17 13348190 13348461 -72090019 + L2 LINE L2 2219 2498 -816 2474 91 0 0 chr17 13348504 13348811 -72089669 + AluSq SINE Alu 1 307 -6 1287 324 94 26 chr17 13349461 13350550 -72087930 - L2 LINE L2 -4 3309 2149 1583 240 67 74 chr17 13350822 13351041 -72087439 + MER77 LTR ERV1 53 272 -333 3496 108 2 0 chr17 13351041 13351493 -72086987 - MLT2A2 LTR ERVL 0 453 1 1583 240 67 74 chr17 13351493 13351824 -72086656 + MER77 LTR ERV1 272 599 -6 2270 154 46 14 chr17 13351827 13352177 -72086303 + THE1B LTR MaLR 3 363 -1 1776 144 9 72 chr17 13352848 13353194 -72085286 + MER33 DNA MER1_type 1 324 0 1601 156 23 0 chr17 13355663 13355920 -72082560 - L1PA16 LINE L1 0 6166 5904 4416 147 20 0 chr17 13355671 13356378 -72082102 - L1PA16 LINE L1 -6 6160 5440 1253 191 70 0 chr17 13356378 13356650 -72081830 + L1 LINE L1 4644 4934 -1212 * 1676 182 33 14 chr17 13356637 13357000 -72081480 + L1 LINE L1 3963 4332 -1814 367 253 80 60 chr17 13357669 13357819 -72080661 + MIR3 SINE MIR 41 193 -15 2269 181 50 83 chr17 13357936 13358786 -72079694 - MER21A LTR ERV1 0 931 1 242 217 14 0 chr17 13358922 13358991 -72079489 + CT-rich Low_complexity Low_complexity 27 96 0 571 199 18 18 chr17 13359014 13359185 -72079295 + CT-rich Low_complexity Low_complexity 1 171 0 215 121 0 0 chr17 13359185 13359218 -72079262 + (TTCC)n Simple_repeat Simple_repeat 2 34 0 670 179 7 7 chr17 13359218 13359363 -72079117 + CT-rich Low_complexity Low_complexity 2 146 0 276 30 0 0 chr17 13359578 13359611 -72078869 + (TG)n Simple_repeat Simple_repeat 1 33 0 357 109 0 0 chr17 13359732 13359787 -72078693 - MLT1F LTR MaLR 0 542 488 * 414 280 0 20 chr17 13359786 13359886 -72078594 - MLT1E LTR MaLR -485 108 11 698 239 81 113 chr17 13359899 13360234 -72078246 - MSTD-int LTR MaLR -7 1364 1041 775 287 42 7 chr17 13360501 13360790 -72077690 - MSTD-int LTR MaLR -765 606 308 1481 150 0 0 chr17 13360794 13361021 -72077459 - AluSg/x SINE Alu 0 310 84 287 322 171 20 chr17 13362109 13362401 -72076079 - L2 LINE L2 -5 3308 2973 203 303 49 49 chr17 13362448 13362590 -72075890 - L2 LINE L2 -419 2895 2754 1302 177 49 115 chr17 13362636 13362878 -72075602 - MER69 DNA AcHobo 0 2526 2270 2109 111 7 0 chr17 13362878 13363167 -72075313 + AluSq SINE Alu 2 292 -21 1302 177 49 115 chr17 13363167 13363335 -72075145 - MER69 DNA AcHobo -256 2270 2162 1702 173 4 4 chr17 13363335 13363612 -72074868 - AluJo SINE Alu -23 289 13 1302 177 49 115 chr17 13363612 13363776 -72074704 - MER69 DNA AcHobo -364 2162 1989 359 341 29 0 chr17 13363766 13363904 -72074576 - MER69 DNA AcHobo -2379 147 6 * 606 299 68 101 chr17 13364675 13365519 -72072961 - L1MEd LINE L1 -5228 891 76 4826 129 29 26 chr17 13365728 13365838 -72072642 - L1PA15 LINE L1 0 6165 6057 2982 93 12 12 chr17 13365838 13366269 -72072211 - MER57B LTR ERV1 -3 431 1 4826 129 29 26 chr17 13366269 13366973 -72071507 - L1PA15 LINE L1 -108 6057 5348 264 299 126 9 chr17 13367015 13367246 -72071234 - HAL1 LINE L1 -678 1829 1572 3370 201 125 153 chr17 13367258 13368915 -72069565 + L1MC3 LINE L1 4 1770 -4794 25 31 0 0 chr17 13368922 13368954 -72069526 + AT_rich Low_complexity Low_complexity 1 32 0 9248 159 6 9 chr17 13368958 13370825 -72067655 - L1PA13 LINE L1 -630 5531 3667 4265 87 52 5 chr17 13370825 13371443 -72067037 + L1PA13 LINE L1 5512 6160 -3 1903 274 60 18 chr17 13371451 13372742 -72065738 + L1MC3 LINE L1 1989 3284 -3280 809 218 27 32 chr17 13372746 13372934 -72065546 - MSTD LTR MaLR 0 396 210 348 24 0 0 chr17 13372983 13373024 -72065456 + (TAA)n Simple_repeat Simple_repeat 3 43 0 1645 266 13 11 chr17 13373024 13373566 -72064914 + L1MC3 LINE L1 3598 4140 -2424 2227 211 55 0 chr17 13373602 13374061 -72064419 + MLT1D LTR MaLR 22 505 0 9332 210 96 28 chr17 13374061 13375336 -72063144 + L1MC3 LINE L1 4137 5324 -2879 303 28 0 0 chr17 13375336 13375372 -72063108 + (TA)n Simple_repeat Simple_repeat 2 37 0 9332 210 96 28 chr17 13375372 13377906 -72060574 + L1MC3 LINE L1 5324 8203 0 518 281 71 129 chr17 13377907 13378229 -72060251 - HAL1 LINE L1 -939 1568 1229 963 123 6 17 chr17 13378229 13378408 -72060072 + (TTTC)n Simple_repeat Simple_repeat 4 180 0 1650 188 33 7 chr17 13378416 13378720 -72059760 - AluSx SINE Alu 0 312 1 518 281 71 129 chr17 13378720 13378737 -72059743 - HAL1 LINE L1 -1285 1222 1206 387 0 0 0 chr17 13378737 13378780 -72059700 + (TG)n Simple_repeat Simple_repeat 2 44 0 1490 63 0 0 chr17 13378788 13378977 -72059503 - L1PA5 LINE L1 0 6154 5966 518 281 71 129 chr17 13378977 13379207 -72059273 - HAL1 LINE L1 -1308 1199 1045 2698 132 27 2 chr17 13379207 13379648 -72058832 - L1PA13 LINE L1 0 6163 5712 518 281 71 129 chr17 13379648 13379943 -72058537 - HAL1 LINE L1 -1462 1045 735 2381 90 6 0 chr17 13380286 13380597 -72057883 + AluSp SINE Alu 1 313 0 1174 142 78 5 chr17 13380614 13380833 -72057647 + L1PA13 LINE L1 5929 6163 0 492 298 45 30 chr17 13381432 13381630 -72056850 + MIR SINE MIR 32 232 -30 207 111 28 0 chr17 13382973 13383009 -72055471 + (TA)n Simple_repeat Simple_repeat 2 38 0 1453 187 32 32 chr17 13383095 13383411 -72055069 + MER2 DNA MER2_type 28 343 -2 387 0 0 0 chr17 13383411 13383454 -72055026 + (TG)n Simple_repeat Simple_repeat 2 44 0 21 0 0 0 chr17 13384000 13384021 -72054459 + AT_rich Low_complexity Low_complexity 1 21 0 270 250 38 8 chr17 13384139 13384271 -72054209 + (TA)n Simple_repeat Simple_repeat 2 137 0 409 288 109 8 chr17 13384312 13384569 -72053911 + L1ME4a LINE L1 5838 6120 -1 413 286 93 37 chr17 13384999 13385160 -72053320 - MIR SINE MIR -70 192 23 379 385 11 35 chr17 13385445 13385793 -72052687 - L1M4 LINE L1 -1850 4296 3957 1618 228 49 41 chr17 13385821 13386352 -72052128 + L1MC5 LINE L1 6996 7530 -431 613 211 51 24 chr17 13386634 13386824 -72051656 + MER63 DNA MER1_type 27 1688 0 203 364 21 57 chr17 13387515 13387655 -72050825 - MER5A DNA MER1_type -48 141 7 1629 193 145 0 chr17 13387670 13388002 -72050478 - MER57A LTR ERV1 -9 394 15 283 325 0 12 chr17 13388899 13388979 -72049501 + MIR SINE MIR 14 92 -170 1378 43 0 0 chr17 13389003 13389166 -72049314 - AluY SINE Alu -12 299 137 357 75 0 0 chr17 13389579 13389632 -72048848 + (TG)n Simple_repeat Simple_repeat 2 54 0 212 216 175 31 chr17 13390124 13390221 -72048259 - MIR SINE MIR -3 259 149 367 295 105 16 chr17 13391184 13391374 -72047106 + MIR SINE MIR 1 207 -55 315 314 0 0 chr17 13391607 13391693 -72046787 - L1MC4 LINE L1 -1343 6699 6614 625 331 65 41 chr17 13391723 13392282 -72046198 - L2 LINE L2 -20 3252 2683 308 284 139 16 chr17 13392329 13392523 -72045957 - L1MEc LINE L1 -4987 1397 1180 817 200 47 0 chr17 13392546 13392716 -72045764 + MER58A DNA MER1_type 47 224 0 414 295 118 20 chr17 13392718 13392972 -72045508 - L1MEc LINE L1 -5301 1262 984 2041 93 15 0 chr17 13393088 13393357 -72045123 - AluSx SINE Alu -1 311 39 2028 141 3 3 chr17 13394261 13394573 -72043907 + AluSx SINE Alu 1 312 0 324 0 0 0 chr17 13394585 13394621 -72043859 + (TG)n Simple_repeat Simple_repeat 2 37 0 421 295 174 0 chr17 13395089 13395279 -72043201 - MIR SINE MIR -6 256 34 225 0 0 0 chr17 13395458 13395483 -72042997 + (A)n Simple_repeat Simple_repeat 1 25 0 32 101 0 0 chr17 13396056 13396165 -72042315 + AT_rich Low_complexity Low_complexity 1 109 0 2270 90 0 0 chr17 13396667 13396955 -72041525 - AluSc SINE Alu -13 296 9 2497 265 69 26 chr17 13396997 13397778 -72040702 - L1MD2 LINE L1 -17 6342 5528 784 297 117 26 chr17 13398002 13398430 -72040050 - LTR33A LTR ERVL 0 523 57 266 225 18 108 chr17 13398521 13398632 -72039848 - L1ME LINE L1 -439 5682 5582 2132 116 30 0 chr17 13398752 13399053 -72039427 + AluSx SINE Alu 1 310 -2 2130 213 59 68 chr17 13399167 13399877 -72038603 - L1ME1 LINE L1 -5 6161 5458 544 345 83 5 chr17 13401038 13401440 -72037040 - L2 LINE L2 -227 3045 2612 571 334 76 23 chr17 13401454 13401888 -72036592 - L2 LINE L2 -926 2388 1932 515 159 24 87 chr17 13402369 13402396 -72036084 - FRAM SINE Alu -136 176 149 716 91 9 0 chr17 13402396 13402506 -72035974 + (TTCC)n Simple_repeat Simple_repeat 3 113 0 515 159 24 87 chr17 13402506 13402604 -72035876 - FRAM SINE Alu -163 149 59 32 0 0 0 chr17 13402693 13402725 -72035755 + AT_rich Low_complexity Low_complexity 1 32 0 198 324 0 0 chr17 13404290 13404358 -72034122 + L2 LINE L2 2228 2295 -1019 207 146 0 0 chr17 13405006 13405047 -72033433 + (CA)n Simple_repeat Simple_repeat 1 41 0 5430 238 85 55 chr17 13405607 13405795 -72032685 + L1M4 LINE L1 1748 1929 -4529 1597 103 60 4 chr17 13405795 13406027 -72032453 + AluSx SINE Alu 50 294 -18 5430 238 85 55 chr17 13406027 13409662 -72028818 + L1M4 LINE L1 1929 5769 -689 2527 52 7 3 chr17 13409662 13409971 -72028509 + AluY SINE Alu 1 310 -1 5430 238 85 55 chr17 13409971 13410091 -72028389 + L1M4 LINE L1 5769 5884 -574 308 228 63 39 chr17 13410095 13410222 -72028258 + L1ME1 LINE L1 4176 4305 -1841 475 266 63 14 chr17 13410244 13410451 -72028029 + L1ME1 LINE L1 5637 5853 -313 284 379 29 29 chr17 13410501 13410675 -72027805 + MIR3 SINE MIR 17 190 -18 22 56 0 0 chr17 13410676 13410712 -72027768 + AT_rich Low_complexity Low_complexity 1 36 0 280 287 106 70 chr17 13410809 13411178 -72027302 + MLT1K LTR MaLR 187 568 -20 301 193 70 0 chr17 13411480 13411537 -72026943 + L2 LINE L2 3212 3272 0 1940 128 54 0 chr17 13414525 13414629 -72023851 + AluSq SINE Alu 1 98 -342 185 0 0 39 chr17 13414629 13414655 -72023825 + (CTACT)n Simple_repeat Simple_repeat 1 25 0 1940 128 54 0 chr17 13414655 13414974 -72023506 + AluSq SINE Alu 98 440 0 210 71 0 0 chr17 13415775 13415803 -72022677 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 366 148 50 79 chr17 13415900 13416001 -72022479 + MER53 DNA DNA 1 98 -91 2311 210 43 2 chr17 13416020 13416505 -72021975 - LTR53 LTR ERVL -14 505 1 293 239 0 0 chr17 13416505 13416565 -72021915 + MER53 DNA DNA 125 184 -5 1032 156 0 0 chr17 13417154 13417334 -72021146 + CT-rich Low_complexity Low_complexity 1 180 0 294 143 0 0 chr17 13417334 13417383 -72021097 + (TCC)n Simple_repeat Simple_repeat 3 51 0 321 115 0 33 chr17 13417388 13417449 -72021031 - Alu SINE Alu -6 296 238 695 123 48 7 chr17 13417450 13417596 -72020884 + CT-rich Low_complexity Low_complexity 1 152 0 1171 189 13 34 chr17 13417596 13417829 -72020651 - AluJo SINE Alu -3 309 82 212 227 0 0 chr17 13418248 13418292 -72020188 - L2 LINE L2 -2 3311 3268 2201 119 3 0 chr17 13418526 13418819 -72019661 - AluSq SINE Alu -19 294 1 202 331 72 14 chr17 13418876 13419015 -72019465 + L2 LINE L2 2851 2997 -275 898 185 113 0 chr17 13419018 13419240 -72019240 + MER33 DNA MER1_type 2 248 -76 1024 133 129 63 chr17 13419378 13419525 -72018955 - L1MA8 LINE L1 -3 6288 6152 1525 226 0 7 chr17 13419525 13419822 -72018658 - AluJo SINE Alu -15 297 3 1024 133 129 63 chr17 13419822 13419960 -72018520 - L1MA8 LINE L1 -139 6152 5984 2394 70 0 13 chr17 13419987 13420287 -72018193 + AluY SINE Alu 1 296 -15 323 211 0 0 chr17 13420288 13420359 -72018121 + MER33 DNA MER1_type 254 324 0 284 314 53 92 chr17 13420381 13420588 -72017892 + L2 LINE L2 3030 3228 -44 * 938 333 118 35 chr17 13420582 13421267 -72017213 + L3 LINE CR1 621 1380 -197 2188 107 17 3 chr17 13421267 13421565 -72016915 - AluSq SINE Alu -11 302 1 938 333 118 35 chr17 13421565 13421662 -72016818 + L3 LINE CR1 1380 1468 -109 833 295 24 10 chr17 13421976 13422264 -72016216 - MER45C DNA AcHobo -626 327 36 2389 69 0 26 chr17 13422323 13422629 -72015851 - AluY SINE Alu -13 298 1 21 0 0 0 chr17 13423286 13423307 -72015173 + AT_rich Low_complexity Low_complexity 1 21 0 30 45 0 0 chr17 13424394 13424438 -72014042 + AT_rich Low_complexity Low_complexity 1 44 0 2200 104 14 0 chr17 13425189 13425476 -72013004 - AluSx SINE Alu -21 291 1 264 231 83 37 chr17 13426577 13426685 -72011795 + L1ME LINE L1 5518 5630 -491 384 22 0 0 chr17 13427209 13427254 -72011226 + (CA)n Simple_repeat Simple_repeat 1 45 0 747 226 42 6 chr17 13428120 13428288 -72010192 + MER5B DNA MER1_type 5 178 0 2267 82 0 0 chr17 13430025 13430345 -72008135 + AluSg SINE Alu 1 320 0 2592 49 0 13 chr17 13431043 13431351 -72007129 - AluY SINE Alu -7 304 1 465 295 32 32 chr17 13431427 13431644 -72006836 - MLT2F LTR ERVL -9 654 438 399 251 128 16 chr17 13431793 13431980 -72006500 - MLT2F LTR ERVL -455 208 1 510 204 0 0 chr17 13432296 13432409 -72006071 + GA-rich Low_complexity Low_complexity 4 116 0 212 258 150 42 chr17 13432957 13433077 -72005403 - MIR SINE MIR -10 252 120 1981 157 11 19 chr17 13433784 13434147 -72004333 + MLT1A1 LTR MaLR 1 360 -5 1976 124 17 3 chr17 13436441 13436732 -72001748 + AluSc SINE Alu 1 295 -14 2284 114 0 0 chr17 13437196 13437495 -72000985 + AluSx SINE Alu 4 302 -10 1101 191 69 3 chr17 13437903 13438325 -72000155 + MLT1D LTR MaLR 2 497 -8 183 333 0 0 chr17 13438572 13438620 -71999860 + L2 LINE L2 3242 3289 -24 729 211 0 0 chr17 13438629 13438762 -71999718 + FLAM_C SINE Alu 1 133 0 33 0 0 0 chr17 13438762 13438795 -71999685 + AT_rich Low_complexity Low_complexity 1 33 0 766 233 26 60 chr17 13440597 13440863 -71997617 - MER102b DNA MER1_type 0 341 85 241 337 0 42 chr17 13441624 13441719 -71996761 + MIR SINE MIR 37 127 -81 393 240 68 52 chr17 13441873 13441927 -71996553 - MLT1K LTR MaLR -10 578 526 194 62 31 0 chr17 13441927 13441959 -71996521 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 393 240 68 52 chr17 13441959 13442096 -71996384 - MLT1K LTR MaLR -62 526 384 1052 217 16 8 chr17 13442642 13442886 -71995594 - L1MB7 LINE L1 -16 6168 5923 2442 211 51 8 chr17 13442891 13443417 -71995063 + MER74A LTR ERVL 1 549 -9 1948 156 18 42 chr17 13443421 13443503 -71994977 - L1MB7 LINE L1 -251 5933 5851 3073 139 29 62 chr17 13443503 13443959 -71994521 - MER4B LTR ERV1 0 610 179 2007 130 4 0 chr17 13443959 13444236 -71994244 - AluSx SINE Alu -34 278 1 3073 139 29 62 chr17 13444236 13444410 -71994070 - MER4B LTR ERV1 -431 179 1 1948 156 18 42 chr17 13444410 13444831 -71993649 - L1MB7 LINE L1 -333 5851 5362 348 221 0 44 chr17 13444838 13444951 -71993529 - L1MB7 LINE L1 -1295 4851 4744 1305 247 28 42 chr17 13445039 13445472 -71993008 + MER39 LTR ERV1 259 685 -22 694 178 30 93 chr17 13446002 13446238 -71992242 - L1MB8 LINE L1 -12 6166 5946 1328 200 7 102 chr17 13446325 13446735 -71991745 + MLT1A2 LTR MaLR 4 374 0 284 164 15 60 chr17 13446845 13446912 -71991568 - LTR8A LTR ERV1 0 727 664 2496 191 63 44 chr17 13446962 13447627 -71990853 - LTR8A LTR ERV1 -49 678 1 590 248 12 81 chr17 13447657 13447915 -71990565 - L1M4b LINE L1 -5643 1216 977 933 235 45 87 chr17 13448091 13448556 -71989924 - LTR56 LTR ERV1 0 437 1 1236 202 72 35 chr17 13448710 13449087 -71989393 - LTR56-int LTR ERV1 -211 4912 4522 851 284 69 32 chr17 13449091 13449159 -71989321 - Charlie7 DNA MER1_type -2126 486 422 2238 114 0 3 chr17 13449159 13449465 -71989015 - AluSx SINE Alu -7 305 1 851 284 69 32 chr17 13449465 13449861 -71988619 - Charlie7 DNA MER1_type -2190 422 5 1095 176 22 57 chr17 13449883 13450110 -71988370 - MER20 DNA MER1_type 0 219 1 2000 77 91 11 chr17 13450431 13450716 -71987764 - AluSp SINE Alu -5 308 1 393 271 86 58 chr17 13451214 13451575 -71986905 + L1ME4a LINE L1 5513 5883 -238 2080 99 0 26 chr17 13452175 13452477 -71986003 - AluSg1 SINE Alu -15 294 1 281 365 21 0 chr17 13452640 13452736 -71985744 + L2 LINE L2 3173 3270 -2 291 300 0 27 chr17 13452971 13453081 -71985399 + CT-rich Low_complexity Low_complexity 1 107 0 682 162 28 22 chr17 13453093 13453272 -71985208 + CT-rich Low_complexity Low_complexity 1 180 0 645 300 162 40 chr17 13453551 13453921 -71984559 + L3 LINE CR1 656 1097 -480 2163 102 3 0 chr17 13453921 13454231 -71984249 - AluSp SINE Alu 0 311 1 645 300 162 40 chr17 13454231 13454329 -71984151 + L3 LINE CR1 1097 1182 -395 412 226 110 34 chr17 13454409 13454555 -71983925 - MLT1J1 LTR MaLR -38 408 252 2303 82 0 0 chr17 13454709 13455017 -71983463 - AluY SINE Alu 0 308 1 2205 125 0 3 chr17 13455402 13455715 -71982765 - AluSx SINE Alu 0 312 1 22 0 0 0 chr17 13455782 13455804 -71982676 + AT_rich Low_complexity Low_complexity 1 22 0 959 156 0 72 chr17 13455858 13456038 -71982442 - AluJb SINE Alu -12 300 134 417 304 23 39 chr17 13456157 13456347 -71982133 - MIR SINE MIR -34 228 43 218 196 0 20 chr17 13456588 13456639 -71981841 + CT-rich Low_complexity Low_complexity 2 51 0 2274 109 0 0 chr17 13458040 13458344 -71980136 - AluSg1 SINE Alu -3 306 3 264 380 80 16 chr17 13458561 13458748 -71979732 + MIR SINE MIR 20 218 -44 238 305 201 0 chr17 13460237 13460391 -71978089 + MIR SINE MIR 22 206 -56 2461 94 0 0 chr17 13460406 13460713 -71977767 + AluSc SINE Alu 1 307 -2 2245 114 27 0 chr17 13461233 13461532 -71976948 + AluSg SINE Alu 1 307 -3 2119 112 11 0 chr17 13463039 13463326 -71975154 - AluSx SINE Alu -22 290 1 27 49 0 0 chr17 13463694 13463735 -71974745 + AT_rich Low_complexity Low_complexity 1 41 0 199 298 117 0 chr17 13463765 13463859 -71974621 + MIR SINE MIR 77 181 -81 2257 60 7 11 chr17 13466416 13466745 -71971735 - AluY SINE Alu 0 328 1 3518 137 46 37 chr17 13467536 13467723 -71970757 - L1PA16 LINE L1 -2 6164 5980 2400 89 0 0 chr17 13467723 13468016 -71970464 - AluSc SINE Alu -16 293 1 3518 137 46 37 chr17 13468016 13468505 -71969975 - L1PA16 LINE L1 -186 5980 5482 352 316 22 29 chr17 13468621 13468760 -71969720 + HAL1 LINE L1 1227 1364 -1143 364 347 143 48 chr17 13468789 13469821 -71968659 - L2 LINE L2 -21 3251 2136 416 295 105 50 chr17 13470273 13470531 -71967949 + HAL1b LINE L1 303 574 -774 3757 261 135 42 chr17 13472294 13473968 -71964512 - HAL1 LINE L1 -6 2501 983 2158 110 14 0 chr17 13473968 13474259 -71964221 + AluSc SINE Alu 1 295 -14 3757 261 135 42 chr17 13474259 13474345 -71964135 - HAL1 LINE L1 -1524 983 906 2060 143 21 19 chr17 13474345 13474717 -71963763 - THE1C LTR MaLR -2 373 1 3757 261 135 42 chr17 13474717 13474902 -71963578 - HAL1 LINE L1 -1601 906 740 1861 152 28 0 chr17 13474902 13475185 -71963295 - AluJb SINE Alu -21 291 1 3757 261 135 42 chr17 13475185 13475525 -71962955 - HAL1 LINE L1 -1767 740 2 346 292 88 102 chr17 13475612 13475985 -71962495 - MLT1I LTR MaLR 0 409 42 1364 173 153 3 chr17 13476033 13476333 -71962147 + MER7A DNA MER2_type 1 343 -3 2835 7 0 0 chr17 13476621 13476930 -71961550 - AluYa5 SINE Alu -2 309 1 1770 116 59 98 chr17 13477427 13477816 -71960664 - THE1C LTR MaLR 0 375 2 1986 136 7 0 chr17 13478589 13478875 -71959605 - AluSq SINE Alu -16 297 10 338 293 32 64 chr17 13479469 13479657 -71958823 - MIR SINE MIR -61 201 20 23 54 0 0 chr17 13479820 13479857 -71958623 + AT_rich Low_complexity Low_complexity 1 37 0 2159 102 3 0 chr17 13480702 13480985 -71957495 - AluSq SINE Alu -17 296 13 595 333 38 0 chr17 13481048 13481258 -71957222 + MER90 LTR ERV1 10 227 -387 837 236 8 62 chr17 13481289 13481548 -71956932 + MER90 LTR ERV1 370 614 0 274 263 5 134 chr17 13482002 13482211 -71956269 - MER102a DNA MER1_type -3 327 146 503 130 10 0 chr17 13482211 13482311 -71956169 + (TTCC)n Simple_repeat Simple_repeat 2 102 0 210 203 27 14 chr17 13482301 13482349 -71956131 + CT-rich Low_complexity Low_complexity 2 53 -23 * 2239 136 0 0 chr17 13482349 13482659 -71955821 - AluSg SINE Alu 0 310 1 210 203 27 14 chr17 13482659 13482684 -71955796 + CT-rich Low_complexity Low_complexity 53 76 0 558 187 0 0 chr17 13482712 13482819 -71955661 + MLT2B2 LTR ERVL 409 515 0 3360 224 77 41 chr17 13482828 13483789 -71954691 - L1M4 LINE L1 -5543 999 4 1875 122 0 0 chr17 13484123 13484378 -71954102 + AluSg SINE Alu 45 299 -11 265 270 84 51 chr17 13484393 13484608 -71953872 + L1ME4a LINE L1 5712 5933 -188 882 242 148 48 chr17 13487158 13487177 -71951303 - L2 LINE L2 -6 3307 3291 2170 110 0 17 chr17 13487177 13487476 -71951004 + AluSg SINE Alu 1 294 -16 882 242 148 48 chr17 13487476 13488114 -71950366 - L2 LINE L2 -22 3291 2576 197 175 0 25 chr17 13488237 13488277 -71950203 + L2 LINE L2 3263 3301 -12 307 270 98 76 chr17 13488941 13489138 -71949342 - MIR SINE MIR -21 187 14 323 291 129 9 chr17 13489555 13489765 -71948715 - L1ME LINE L1 -648 5522 5288 341 312 164 15 chr17 13489779 13490109 -71948371 - L1ME LINE L1 -908 5238 4860 189 0 0 0 chr17 13490574 13490595 -71947885 + (A)n Simple_repeat Simple_repeat 1 21 0 491 101 13 13 chr17 13490966 13491045 -71947435 + MADE1 DNA Mariner 2 80 0 1142 179 59 106 chr17 13491078 13491503 -71946977 + MLT1D LTR MaLR 1 405 -100 4733 166 8 4 chr17 13491506 13492520 -71945960 - L1PA16 LINE L1 -14 6152 5138 313 303 167 54 chr17 13492612 13492929 -71945551 + L2 LINE L2 1899 2251 -1063 665 82 10 0 chr17 13493264 13493361 -71945119 + (CAT)n Simple_repeat Simple_repeat 1 98 0 2073 86 32 11 chr17 13494579 13494901 -71943579 + AluSq SINE Alu 1 328 0 2361 103 0 3 chr17 13495223 13495525 -71942955 + AluSx SINE Alu 3 303 -9 570 297 138 67 chr17 13497909 13498922 -71939558 + L1MC/D LINE L1 3950 5034 -1112 537 278 60 43 chr17 13499092 13499595 -71938885 + L1MC/D LINE L1 5258 5780 -477 1776 177 6 6 chr17 13500087 13500415 -71938065 + MLT1A1 LTR MaLR 1 328 -37 230 98 0 24 chr17 13500589 13500630 -71937850 - MLT2C1 LTR ERVL -8 389 350 887 158 19 0 chr17 13500636 13500794 -71937686 - MLT1A2 LTR MaLR -213 161 1 1919 166 0 3 chr17 13501117 13501413 -71937067 - AluJb SINE Alu -17 295 1 244 248 23 39 chr17 13501818 13501947 -71936533 + L1P LINE L1 5293 5419 -735 39 0 0 0 chr17 13502450 13502489 -71935991 + AT_rich Low_complexity Low_complexity 1 39 0 341 286 129 34 chr17 13502630 13503152 -71935328 + L1ME3A LINE L1 5315 5890 -280 1035 171 0 0 chr17 13503364 13503528 -71934952 - AluSg/x SINE Alu -12 300 137 528 328 149 9 chr17 13503674 13504124 -71934356 + L1ME4a LINE L1 5320 5831 -290 253 221 39 13 chr17 13504173 13504250 -71934230 + (TATATG)n Simple_repeat Simple_repeat 6 84 0 1568 223 55 26 chr17 13504608 13504993 -71933487 - MSTD LTR MaLR 0 396 1 553 146 0 0 chr17 13504997 13505086 -71933394 - MSTD LTR MaLR -307 89 1 2523 190 42 15 chr17 13505378 13505484 -71932996 - MER74A LTR ERVL 0 558 456 180 0 0 0 chr17 13505484 13505504 -71932976 + (CACAC)n Simple_repeat Simple_repeat 1 20 0 2523 190 42 15 chr17 13505504 13505938 -71932542 - MER74A LTR ERVL -102 456 3 228 197 82 0 chr17 13506394 13506455 -71932025 - L1MB4 LINE L1 -13 6167 6102 1693 154 226 37 chr17 13506817 13507278 -71931202 - LTR10A LTR ERV1 -61 548 1 2488 63 3 0 chr17 13507431 13507730 -71930750 - AluY SINE Alu -11 300 1 1914 156 13 19 chr17 13507829 13508136 -71930344 - AluJo SINE Alu -7 305 1 2086 137 0 0 chr17 13508429 13508721 -71929759 - AluSx SINE Alu -20 292 1 21 0 0 0 chr17 13508737 13508758 -71929722 + AT_rich Low_complexity Low_complexity 1 21 0 1126 224 7 31 chr17 13508758 13508793 -71929687 - L1MB7 LINE L1 -19 6165 6131 1990 118 0 7 chr17 13508793 13509065 -71929415 - AluSx SINE Alu -9 303 34 1126 224 7 31 chr17 13509065 13509315 -71929165 - L1MB7 LINE L1 -53 6131 5887 644 250 85 24 chr17 13509632 13509844 -71928636 + MIR SINE MIR 20 244 -18 2294 115 0 0 chr17 13511663 13511967 -71926513 + AluSq SINE Alu 2 305 -8 305 348 40 45 chr17 13512043 13512244 -71926236 - L2 LINE L2 0 3272 3073 302 286 118 53 chr17 13512404 13512761 -71925719 + L2 LINE L2 2934 3313 0 288 290 14 0 chr17 13513680 13513770 -71924710 - MIR SINE MIR -78 130 35 399 264 62 23 chr17 13514575 13514704 -71923776 + MIR SINE MIR 11 144 -118 2196 100 3 0 chr17 13514961 13515252 -71923228 - AluSg SINE Alu -18 292 1 2498 53 0 3 chr17 13515259 13515562 -71922918 - AluY SINE Alu -6 305 4 2158 117 15 3 chr17 13516125 13516458 -71922022 - L1MC1 LINE L1 0 6333 5997 1957 148 0 13 chr17 13516687 13516985 -71921495 + AluSx SINE Alu 1 294 -18 468 235 31 19 chr17 13517015 13517338 -71921142 + (TA)n Simple_repeat Simple_repeat 1 327 0 249 303 43 19 chr17 13517453 13517615 -71920865 - L1MB7 LINE L1 -2073 5735 5570 597 209 36 75 chr17 13517722 13517978 -71920502 + MER57B LTR ERV1 10 266 -137 402 211 11 0 chr17 13518092 13518182 -71920298 + MER57A LTR ERV1 313 403 0 1869 155 11 3 chr17 13518581 13518865 -71919615 + AluJo SINE Alu 9 294 -18 322 279 132 23 chr17 13520093 13520222 -71918258 - MIR SINE MIR -71 191 49 1642 234 24 53 chr17 13520544 13520853 -71917627 + L1M4 LINE L1 2627 2944 -3202 2229 100 10 6 chr17 13520853 13521164 -71917316 + AluSx SINE Alu 1 312 0 1642 234 24 53 chr17 13521164 13521373 -71917107 + L1M4 LINE L1 2944 3125 -3021 718 172 13 25 chr17 13521373 13521530 -71916950 + L1PB4 LINE L1 5999 6153 -3 1642 234 24 53 chr17 13521530 13521648 -71916832 + L1M4 LINE L1 3125 3245 -2901 21 0 0 0 chr17 13522601 13522622 -71915858 + AT_rich Low_complexity Low_complexity 1 21 0 239 217 17 9 chr17 13523795 13523866 -71914614 - Charlie8 DNA MER1_type -989 1428 1372 455 299 94 40 chr17 13523901 13524252 -71914228 - Charlie8 DNA MER1_type -1976 441 72 244 250 116 9 chr17 13524635 13524747 -71913733 + L1ME LINE L1 5748 5871 -250 21 57 0 0 chr17 13524834 13524869 -71913611 + AT_rich Low_complexity Low_complexity 1 35 0 371 235 175 49 chr17 13525119 13525302 -71913178 + MLT1J LTR MaLR 3 208 -303 319 263 20 10 chr17 13526029 13526128 -71912352 - L1MCa LINE L1 -6320 106 7 1021 181 87 46 chr17 13526362 13526737 -71911743 + MSTC LTR MaLR 1 428 0 275 311 0 0 chr17 13527012 13527086 -71911394 - MIR SINE MIR -93 115 42 269 373 79 17 chr17 13527117 13527294 -71911186 - MER5A DNA MER1_type -1 188 1 2211 95 7 0 chr17 13527420 13527704 -71910776 + AluSg SINE Alu 1 286 -24 1740 71 0 0 chr17 13527978 13528217 -71910263 + L1PB1 LINE L1 5553 5791 -360 442 61 0 101 chr17 13528217 13528415 -71910065 + (TA)n Simple_repeat Simple_repeat 1 178 0 436 62 10 93 chr17 13528436 13528630 -71909850 + (TA)n Simple_repeat Simple_repeat 2 179 0 332 153 0 0 chr17 13528745 13528804 -71909676 + L1PB1 LINE L1 5793 5851 -300 203 196 22 0 chr17 13528920 13528966 -71909514 + GA-rich Low_complexity Low_complexity 2 48 0 1997 78 85 0 chr17 13528967 13529250 -71909230 + L1PB1 LINE L1 5838 6144 -7 482 282 206 10 chr17 13529273 13529482 -71908998 - MIR SINE MIR -5 257 8 482 290 50 54 chr17 13529574 13529833 -71908647 + MIR SINE MIR 3 260 -2 25 31 0 0 chr17 13529835 13529867 -71908613 + AT_rich Low_complexity Low_complexity 1 32 0 978 117 0 0 chr17 13530060 13530205 -71908275 - L1PB1 LINE L1 -138 6013 5869 217 174 22 0 chr17 13530436 13530482 -71907998 + GA-rich Low_complexity Low_complexity 2 48 0 22 0 0 0 chr17 13530612 13530634 -71907846 + AT_rich Low_complexity Low_complexity 1 22 0 367 323 82 56 chr17 13530678 13531179 -71907301 + L1 LINE L1 4757 5276 -870 2177 109 0 45 chr17 13531179 13531492 -71906988 + AluSc SINE Alu 1 299 -10 367 323 82 56 chr17 13531492 13531548 -71906932 + L1 LINE L1 5276 5329 -817 32 57 0 0 chr17 13531646 13531699 -71906781 + AT_rich Low_complexity Low_complexity 1 53 0 277 211 32 11 chr17 13531736 13531831 -71906649 + L1ME4a LINE L1 6023 6119 -2 290 329 77 43 chr17 13532990 13533224 -71905256 + MIR SINE MIR 6 247 -15 661 298 143 40 chr17 13533318 13533738 -71904742 + L2 LINE L2 2851 3313 0 1420 166 10 30 chr17 13534889 13535185 -71903295 - L1MB8 LINE L1 -5 6173 5884 2252 89 0 0 chr17 13535545 13535867 -71902613 + AluSx SINE Alu 1 322 0 214 239 28 28 chr17 13536390 13536461 -71902019 + L2 LINE L2 2447 2517 -797 205 303 37 37 chr17 13536468 13536577 -71901903 + MIR SINE MIR 80 188 -74 190 267 285 24 chr17 13536629 13536794 -71901686 + MIR SINE MIR 19 226 -36 534 332 81 14 chr17 13538352 13538635 -71899845 - L2 LINE L2 -75 3197 2896 214 381 102 0 chr17 13538723 13538899 -71899581 - L2 LINE L2 -568 2746 2553 462 269 72 0 chr17 13539150 13539317 -71899163 - L1M4 LINE L1 -1341 4805 4627 246 310 43 0 chr17 13539364 13539480 -71899000 + HAL1 LINE L1 1646 1766 -741 504 241 45 0 chr17 13539943 13540076 -71898404 - MIR SINE MIR -60 202 64 334 307 12 60 chr17 13540202 13540368 -71898112 + HAL1b LINE L1 754 911 -437 380 235 62 67 chr17 13540579 13540758 -71897722 - MER5B DNA MER1_type 0 178 1 1768 62 0 0 chr17 13540778 13540988 -71897492 + AluY SINE Alu 1 210 -101 2047 126 36 7 chr17 13541171 13541473 -71897007 - AluSx SINE Alu -1 311 1 1761 68 106 0 chr17 13541495 13541732 -71896748 - AluY SINE Alu -11 300 39 189 426 40 0 chr17 13542457 13542558 -71895922 - MIR SINE MIR -110 152 48 2547 74 0 0 chr17 13542877 13543188 -71895292 - AluY SINE Alu 0 311 1 420 228 0 0 chr17 13543213 13543292 -71895188 + FRAM SINE Alu 66 144 -32 1292 183 8 24 chr17 13543515 13543761 -71894719 + AluJo SINE Alu 39 280 -32 689 186 0 7 chr17 13543767 13543912 -71894568 + GA-rich Low_complexity Low_complexity 1 144 0 2306 249 74 30 chr17 13546055 13546809 -71891671 - MER21B LTR ERV1 -58 805 19 373 220 18 46 chr17 13546807 13546916 -71891564 - MER21B LTR ERV1 -757 106 1 * 2012 97 24 14 chr17 13547090 13547380 -71891100 - AluSq SINE Alu -20 293 1 22 0 0 0 chr17 13547382 13547404 -71891076 + AT_rich Low_complexity Low_complexity 1 22 0 460 345 45 42 chr17 13547435 13547882 -71890598 + HAL1b LINE L1 381 802 -546 2378 86 0 0 chr17 13548379 13548671 -71889809 + AluSx SINE Alu 1 292 -20 326 331 83 0 chr17 13548695 13548949 -71889531 + L1MEc LINE L1 1538 1812 -4584 429 210 74 40 chr17 13548968 13549144 -71889336 + L1MEc LINE L1 1909 2090 -4306 * 1296 248 146 6 chr17 13549132 13549757 -71888723 + L1MEc LINE L1 3194 3905 -2310 1231 105 0 0 chr17 13550307 13550479 -71888001 - AluSc SINE Alu -17 292 121 225 0 0 0 chr17 13550480 13550505 -71887975 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 2054 97 0 53 chr17 13550505 13550805 -71887675 - AluSp SINE Alu -29 284 1 3608 188 143 116 chr17 13550901 13551422 -71887058 - L1MD3 LINE L1 -3 7992 7486 583 217 8 0 chr17 13551422 13551542 -71886938 - MLT1F1 LTR MaLR -442 125 5 3608 188 143 116 chr17 13551542 13552467 -71886013 - L1MD3 LINE L1 -509 7486 6385 346 252 105 59 chr17 13552586 13552824 -71885656 - HAL1b LINE L1 -872 476 228 2361 92 13 0 chr17 13552915 13553221 -71885259 + AluSx SINE Alu 1 310 -2 304 189 144 0 chr17 13554288 13554378 -71884102 + MIR SINE MIR 27 129 -133 306 375 81 6 chr17 13554692 13554852 -71883628 - MIR3 SINE MIR -21 187 16 237 368 66 9 chr17 13555462 13555674 -71882806 - MLT1K LTR MaLR -224 364 141 2206 92 0 41 chr17 13556036 13556211 -71882269 - AluSx SINE Alu -9 303 145 2370 66 0 3 chr17 13556211 13556499 -71881981 - AluY SINE Alu -16 295 9 2206 92 0 41 chr17 13556499 13556639 -71881841 - AluSx SINE Alu -167 145 1 218 276 17 0 chr17 13556963 13557021 -71881459 + MIR3 SINE MIR 126 184 -24 260 225 88 61 chr17 13558106 13558221 -71880259 + MIR SINE MIR 19 151 -57 724 233 93 35 chr17 13558906 13559152 -71879328 - MIR SINE MIR -12 250 10 586 256 156 74 chr17 13559386 13559439 -71879041 - MLT1L LTR MaLR -77 538 491 2163 126 0 0 chr17 13559439 13559763 -71878717 - AluSq SINE Alu 0 324 1 586 256 156 74 chr17 13559763 13560087 -71878393 - MLT1L LTR MaLR -124 491 129 234 0 0 0 chr17 13560298 13560324 -71878156 + (CA)n Simple_repeat Simple_repeat 2 27 0 198 196 39 20 chr17 13560379 13560430 -71878050 + MIR SINE MIR 96 147 -115 207 174 0 43 chr17 13560430 13560476 -71878004 + (TTCA)n Simple_repeat Simple_repeat 4 47 0 2527 55 0 3 chr17 13560756 13561067 -71877413 + AluY SINE Alu 1 310 -1 2510 71 0 3 chr17 13562253 13562563 -71875917 - AluSc SINE Alu 0 309 1 180 0 0 0 chr17 13562568 13562588 -71875892 + (T)n Simple_repeat Simple_repeat 1 20 0 186 325 62 25 chr17 13563220 13563300 -71875180 - MIR SINE MIR -90 118 36 694 286 188 14 chr17 13563700 13564286 -71874194 - L2 LINE L2 -3 3310 2614 302 345 36 36 chr17 13564577 13564771 -71873709 - L1ME LINE L1 -394 5727 5534 22 35 0 0 chr17 13564874 13564903 -71873577 + AT_rich Low_complexity Low_complexity 1 29 0 189 0 0 0 chr17 13565200 13565221 -71873259 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 187 397 43 0 chr17 13565319 13565435 -71873045 - L2 LINE L2 -16 3256 3136 545 236 74 83 chr17 13565685 13565901 -71872579 + MER58C DNA MER1_type 1 214 -1 431 180 328 32 chr17 13568102 13568291 -71870189 - MLT1G LTR MaLR -24 566 322 323 241 96 24 chr17 13568374 13568457 -71870023 - MLT1G LTR MaLR -381 168 80 410 175 25 0 chr17 13568528 13568608 -71869872 + MER31B LTR ERV1 1 82 -384 2424 230 38 44 chr17 13568608 13569273 -71869207 + MER67B LTR ERV1 1 661 0 525 352 146 12 chr17 13569274 13569768 -71868712 - L2 LINE L2 -700 2614 2055 198 246 119 32 chr17 13569865 13569991 -71868489 - L2 LINE L2 -1883 1431 1295 2178 99 3 40 chr17 13571366 13571689 -71866791 + AluY SINE Alu 1 311 0 234 62 0 0 chr17 13571696 13571728 -71866752 + (TA)n Simple_repeat Simple_repeat 2 33 0 1563 63 0 0 chr17 13571732 13571922 -71866558 - L1P4 LINE L1 -456 5712 5523 240 163 0 0 chr17 13571923 13571966 -71866514 + (TA)n Simple_repeat Simple_repeat 1 43 0 301 286 55 0 chr17 13571972 13572063 -71866417 + L1MC4 LINE L1 6607 6702 -1340 2239 92 0 10 chr17 13572293 13572585 -71865895 + AluSc SINE Alu 1 289 -20 406 295 6 60 chr17 13572646 13572812 -71865668 - MIR SINE MIR -2 260 104 202 283 11 144 chr17 13572980 13573167 -71865313 - L2 LINE L2 -186 3086 2925 552 237 71 12 chr17 13573200 13573369 -71865111 - MER104 DNA MER2_type -1 179 1 2152 107 21 3 chr17 13573395 13573684 -71864796 - AluSq SINE Alu -19 294 1 1914 110 4 18 chr17 13573949 13574221 -71864259 - L1PA10 LINE L1 0 6168 5901 2892 53 68 35 chr17 13574221 13574264 -71864216 + L1PA10 LINE L1 5451 5491 -677 2040 127 7 0 chr17 13574264 13574555 -71863925 + AluSx SINE Alu 3 295 -17 2892 53 68 35 chr17 13574555 13574907 -71863573 + L1PA10 LINE L1 5491 5859 -309 308 227 43 43 chr17 13574907 13575048 -71863432 - MER113 DNA MER1_type? -349 172 32 213 313 10 10 chr17 13575074 13575173 -71863307 - L2 LINE L2 -1052 2262 2164 192 191 0 24 chr17 13575519 13575561 -71862919 - L2 LINE L2 -6 3307 3267 584 215 6 0 chr17 13576276 13576439 -71862041 + (TAGA)n Simple_repeat Simple_repeat 2 165 0 195 290 29 0 chr17 13576535 13576604 -71861876 + MIR SINE MIR 79 149 -113 328 313 124 39 chr17 13576646 13576879 -71861601 - MIR SINE MIR 0 262 10 584 113 0 0 chr17 13577470 13577550 -71860930 + MADE1 DNA Mariner 1 80 0 237 132 0 0 chr17 13577786 13577824 -71860656 + (TATG)n Simple_repeat Simple_repeat 3 40 0 2255 94 6 38 chr17 13578002 13578321 -71860159 - AluSp SINE Alu -4 309 1 372 273 68 37 chr17 13579804 13579965 -71858515 - MIR SINE MIR -89 173 8 1792 172 48 12 chr17 13580471 13580803 -71857677 - MER7A DNA MER2_type -3 343 2 258 376 106 35 chr17 13580806 13581061 -71857419 + L2 LINE L2 2999 3271 -1 641 280 95 13 chr17 13581776 13582011 -71856469 - MIR SINE MIR 0 262 5 2434 80 3 6 chr17 13582154 13582466 -71856014 + AluY SINE Alu 1 311 0 180 154 0 0 chr17 13583200 13583226 -71855254 - L3b LINE CR1 -264 1319 1294 309 290 122 19 chr17 13584461 13584568 -71853912 + MIR SINE MIR 6 123 -139 21 71 0 0 chr17 13585344 13585386 -71853094 + AT_rich Low_complexity Low_complexity 1 42 0 2282 108 0 3 chr17 13585676 13585982 -71852498 + AluSx SINE Alu 1 305 -7 711 179 16 65 chr17 13586289 13586473 -71852007 + MER53 DNA DNA 1 175 -14 994 87 0 16 chr17 13587175 13587301 -71851179 - AluSq/x SINE Alu -189 124 1 27 0 0 0 chr17 13587302 13587329 -71851151 + AT_rich Low_complexity Low_complexity 1 27 0 209 254 51 0 chr17 13589436 13589495 -71848985 + L3 LINE CR1 1516 1577 0 524 143 0 11 chr17 13590057 13590148 -71848332 - L1MA3 LINE L1 0 6305 6216 300 268 37 0 chr17 13590163 13590245 -71848235 - MIR SINE MIR -108 154 70 2289 80 23 7 chr17 13590498 13590800 -71847680 - AluY SINE Alu -4 307 1 291 28 0 0 chr17 13590991 13591027 -71847453 + (TG)n Simple_repeat Simple_repeat 1 36 0 1239 216 79 16 chr17 13591175 13591480 -71847000 + MER2 DNA MER2_type 22 345 0 250 300 112 58 chr17 13591634 13591947 -71846533 - L1MC/D LINE L1 -2150 5658 5329 5243 235 90 10 chr17 13592092 13594287 -71844193 - L1ME3 LINE L1 -2 6160 3690 370 225 44 131 chr17 13594296 13594331 -71844149 + LTR41 LTR ERVL 549 585 -188 324 48 0 0 chr17 13594331 13594373 -71844107 + (TG)n Simple_repeat Simple_repeat 2 43 0 370 225 44 131 chr17 13594373 13594497 -71843983 + LTR41 LTR ERVL 585 694 -79 743 246 11 6 chr17 13594729 13594904 -71843576 - MER58A DNA MER1_type -12 212 37 2350 84 3 0 chr17 13595224 13595521 -71842959 - AluSp SINE Alu -15 298 1 480 266 130 16 chr17 13595546 13595730 -71842750 + MIR SINE MIR 7 211 -51 22 0 0 0 chr17 13595810 13595832 -71842648 + AT_rich Low_complexity Low_complexity 1 22 0 361 193 53 70 chr17 13596258 13596271 -71842209 - L1MC4 LINE L1 -124 7918 7906 396 0 0 0 chr17 13596271 13596315 -71842165 + (CTATT)n Simple_repeat Simple_repeat 1 44 0 361 193 53 70 chr17 13596315 13596415 -71842065 - L1MC4 LINE L1 -136 7906 7807 2297 64 0 3 chr17 13596416 13596734 -71841746 + AluY SINE Alu 1 317 0 675 167 54 40 chr17 13596742 13596923 -71841557 - MER31B LTR ERV1 -250 235 7 2296 106 0 3 chr17 13596989 13597300 -71841180 + AluSg SINE Alu 1 310 0 1350 198 156 70 chr17 13598551 13598980 -71839500 - MER31B LTR ERV1 0 466 1 271 309 29 51 chr17 13599250 13599425 -71839055 - MLT1K LTR MaLR -6 582 412 2491 61 3 0 chr17 13599811 13600108 -71838372 + AluY SINE Alu 1 298 -13 2444 80 0 0 chr17 13600662 13600963 -71837517 + AluY SINE Alu 1 301 -10 2007 192 14 11 chr17 13602826 13603185 -71835295 + MLT1A1 LTR MaLR 4 363 -2 772 227 23 0 chr17 13604446 13604622 -71833858 + MER5A DNA MER1_type 7 186 -3 228 295 36 86 chr17 13604791 13604930 -71833550 - MER5A DNA MER1_type -2 187 56 312 48 0 0 chr17 13605257 13605299 -71833181 + (TTTG)n Simple_repeat Simple_repeat 1 42 0 1737 139 15 7 chr17 13605310 13605584 -71832896 - AluJb SINE Alu -36 276 1 180 200 29 0 chr17 13607491 13607526 -71830954 + MER5A DNA MER1_type 151 186 -3 309 200 148 17 chr17 13608051 13608166 -71830314 - MER113 DNA MER1_type? -349 172 43 3904 200 24 48 chr17 13608505 13608685 -71829795 + L1MB8 LINE L1 5145 5328 -850 2130 138 0 0 chr17 13608685 13608989 -71829491 + AluSx SINE Alu 3 306 -6 3904 200 24 48 chr17 13608989 13609852 -71828628 + L1MB8 LINE L1 5328 6178 0 6136 129 14 9 chr17 13610091 13611584 -71826896 + L1PB1 LINE L1 4667 6170 0 234 377 74 0 chr17 13611720 13611842 -71826638 + L2 LINE L2 3137 3267 -5 2153 129 126 0 chr17 13612799 13613179 -71825301 + MSTA LTR MaLR 1 428 0 3246 178 32 16 chr17 13613208 13613887 -71824593 - L1MB5 LINE L1 -9 6165 5476 409 121 0 30 chr17 13613919 13613985 -71824495 - L1PA8A LINE L1 -6 6125 6062 1591 65 0 0 chr17 13613985 13614200 -71824280 + L1PA8A LINE L1 5845 6059 -72 1391 187 70 6 chr17 13614197 13614683 -71823797 - L1MB5 LINE L1 -709 5471 4961 * 2430 229 18 42 chr17 13614686 13615465 -71823015 - L1MB5 LINE L1 -1616 4530 3771 1649 108 0 0 chr17 13615707 13615919 -71822561 + AluSq SINE Alu 1 212 -101 384 232 33 93 chr17 13616116 13616267 -71822213 - MLT1G LTR MaLR -7 583 442 966 303 22 38 chr17 13617927 13618376 -71820104 + LTR16B LTR ERVL 23 464 0 253 313 12 12 chr17 13619074 13619154 -71819326 + MIR SINE MIR 58 137 -71 217 227 0 0 chr17 13620959 13621003 -71817477 + (CA)n Simple_repeat Simple_repeat 2 45 0 182 302 93 47 chr17 13621064 13621193 -71817287 - L2 LINE L2 0 3313 3179 467 279 0 62 chr17 13622879 13623040 -71815440 + MER63A DNA MER1_type 60 210 0 1985 148 48 31 chr17 13623446 13623804 -71814676 + THE1B LTR MaLR 1 364 0 2281 79 4 0 chr17 13624673 13624972 -71813508 + AluSp SINE Alu 6 305 0 232 190 152 25 chr17 13625536 13625615 -71812865 + MIR SINE MIR 164 252 -10 479 360 50 4 chr17 13625689 13625931 -71812549 + MIR SINE MIR 2 254 -8 364 150 0 83 chr17 13626662 13626855 -71811625 + (TA)n Simple_repeat Simple_repeat 2 178 0 542 155 0 64 chr17 13626894 13627081 -71811399 + (TA)n Simple_repeat Simple_repeat 2 176 0 328 195 0 77 chr17 13627118 13627313 -71811167 + (TA)n Simple_repeat Simple_repeat 1 180 0 310 181 0 106 chr17 13627353 13627552 -71810928 + (TA)n Simple_repeat Simple_repeat 1 178 0 358 151 0 80 chr17 13627557 13627848 -71810632 + (TATATG)n Simple_repeat Simple_repeat 1 267 0 319 204 0 68 chr17 13627856 13628047 -71810433 + (TA)n Simple_repeat Simple_repeat 1 178 0 547 158 0 86 chr17 13628089 13628490 -71809990 + (TA)n Simple_repeat Simple_repeat 1 366 0 520 131 0 106 chr17 13628527 13628726 -71809754 + (TA)n Simple_repeat Simple_repeat 1 178 0 619 177 0 32 chr17 13628762 13628948 -71809532 + (TA)n Simple_repeat Simple_repeat 1 180 0 2614 55 0 0 chr17 13629880 13630191 -71808289 + AluY SINE Alu 1 311 0 2099 130 3 0 chr17 13630439 13630724 -71807756 - AluSx SINE Alu -21 291 6 231 336 112 15 chr17 13634336 13634470 -71804010 - MIR SINE MIR 0 262 116 306 363 0 0 chr17 13634693 13634839 -71803641 + MER117 DNA MER1_type 1 146 -51 1947 164 73 168 chr17 13635128 13635931 -71802549 + LTR8A LTR ERV1 1 727 0 222 62 0 0 chr17 13636154 13636186 -71802294 + (TG)n Simple_repeat Simple_repeat 2 33 0 255 286 26 0 chr17 13636847 13636924 -71801556 - MIR3 SINE MIR -6 202 124 1510 211 76 110 chr17 13636925 13637479 -71801001 + MLT1E LTR MaLR 1 535 -58 1669 246 47 11 chr17 13637602 13638050 -71800430 + MLT1C LTR MaLR 1 464 -3 258 136 0 0 chr17 13638171 13638215 -71800265 + (GA)n Simple_repeat Simple_repeat 1 44 0 1024 221 64 15 chr17 13638420 13638923 -71799557 + L1MEc LINE L1 2101 2587 -3628 325 283 28 14 chr17 13638921 13639066 -71799414 + L1MA10 LINE L1 6180 6326 -8 * 2053 153 129 0 chr17 13639205 13639584 -71798896 + MSTA LTR MaLR 1 428 0 7899 173 34 36 chr17 13639586 13641168 -71797312 + MSTA-int LTR MaLR 3 1580 0 2190 152 123 0 chr17 13641168 13641549 -71796931 + MSTA LTR MaLR 1 428 0 21 89 0 0 chr17 13641581 13641637 -71796843 + AT_rich Low_complexity Low_complexity 1 56 0 304 289 133 16 chr17 13643444 13643572 -71794908 - MIR3 SINE MIR -21 187 45 1807 220 0 8 chr17 13643781 13644149 -71794331 + MLT1A1 LTR MaLR 1 365 0 791 217 111 24 chr17 13644444 13644651 -71793829 - MIR SINE MIR -26 236 12 1866 182 3 3 chr17 13645032 13645334 -71793146 + AluJb SINE Alu 1 302 -10 2338 95 0 3 chr17 13645401 13645705 -71792775 + AluSq SINE Alu 1 303 -10 336 261 59 8 chr17 13645748 13645867 -71792613 - MER69A DNA AcHobo -26 151 27 1159 142 75 12 chr17 13646551 13646791 -71791689 + L1MB3 LINE L1 5929 6183 0 488 142 26 9 chr17 13647923 13647935 -71790545 + (TA)n Simple_repeat Simple_repeat 2 12 -104 1958 123 11 7 chr17 13647935 13648219 -71790261 + AluSx SINE Alu 1 285 -27 488 142 26 9 chr17 13648219 13648319 -71790161 + (TA)n Simple_repeat Simple_repeat 12 116 0 2453 79 13 0 chr17 13649183 13649486 -71788994 + AluY SINE Alu 1 307 -4 817 78 66 6 chr17 13651975 13652142 -71786338 + GA-rich Low_complexity Low_complexity 2 178 0 647 250 61 25 chr17 13652304 13652500 -71785980 - MER20 DNA MER1_type -16 203 1 200 373 0 13 chr17 13652828 13652903 -71785577 + L3 LINE CR1 1497 1570 -7 324 218 0 26 chr17 13655031 13655109 -71783371 + MIR SINE MIR 86 161 -101 34 42 0 0 chr17 13655588 13655636 -71782844 + AT_rich Low_complexity Low_complexity 1 48 0 578 281 51 18 chr17 13656321 13656538 -71781942 + MIR SINE MIR 17 240 -22 372 263 53 74 chr17 13657442 13657632 -71780848 - L1MC5 LINE L1 -48 7913 7728 3863 154 16 3 chr17 13657725 13658366 -71780114 + MER39B LTR ERV1 4 652 -1 493 68 96 0 chr17 13659698 13659771 -71778709 + MADE1 DNA Mariner 1 80 0 295 70 0 0 chr17 13659772 13659815 -71778665 + MADE1 DNA Mariner 38 80 0 233 331 103 22 chr17 13660088 13660272 -71778208 + L3b LINE CR1 1114 1312 -271 2522 161 54 2 chr17 13660283 13660706 -71777774 + L1MB2 LINE L1 5712 6156 -15 664 149 52 45 chr17 13660706 13660832 -71777648 + L1MB2 LINE L1 6037 6171 0 2263 99 13 0 chr17 13662340 13662643 -71775837 + AluSc SINE Alu 1 307 -2 1709 122 15 4 chr17 13662759 13663022 -71775458 + L1MA5 LINE L1 6035 6300 0 2070 269 80 15 chr17 13663024 13663474 -71775006 + L1ME3A LINE L1 5352 5873 -297 2114 109 3 17 chr17 13663474 13663776 -71774704 + AluSg SINE Alu 1 298 -12 2070 269 80 15 chr17 13663776 13664090 -71774390 + L1ME3A LINE L1 5873 6165 -5 268 235 35 47 chr17 13664467 13664552 -71773928 - MIR SINE MIR -95 167 84 2397 76 3 13 chr17 13665185 13665488 -71772992 + AluSg SINE Alu 1 300 -10 21 0 0 0 chr17 13665520 13665541 -71772939 + AT_rich Low_complexity Low_complexity 1 21 0 478 321 74 0 chr17 13665659 13665821 -71772659 + MIR3 SINE MIR 23 196 -12 2057 94 6 44 chr17 13666216 13666536 -71771944 + AluSx SINE Alu 1 308 -4 511 258 73 28 chr17 13666699 13666877 -71771603 - MIR SINE MIR -61 201 16 182 337 11 11 chr17 13668001 13668093 -71770387 + L2 LINE L2 2130 2221 -1093 253 232 0 110 chr17 13668380 13668462 -71770018 + MER96 DNA MER1_type? 103 175 0 254 185 0 19 chr17 13668705 13668759 -71769721 + HAL1 LINE L1 1630 1682 -825 211 184 40 40 chr17 13669027 13669103 -71769377 + GA-rich Low_complexity Low_complexity 1 76 0 451 344 59 27 chr17 13669165 13669351 -71769129 - MIR3 SINE MIR -14 194 3 1127 121 0 0 chr17 13670150 13670307 -71768173 - AluSg/x SINE Alu -16 296 140 3140 220 105 30 chr17 13670553 13671461 -71767019 + Zaphod DNA AcHobo 15 990 -3041 2297 8 0 0 chr17 13671522 13671769 -71766711 + AluYb8 SINE Alu 64 310 -8 958 191 6 0 chr17 13671770 13671943 -71766537 + L1MB5 LINE L1 5908 6081 -93 655 271 47 0 chr17 13671946 13672116 -71766364 + MER58A DNA MER1_type 47 224 0 1937 189 50 12 chr17 13672124 13672543 -71765937 + Zaphod DNA AcHobo 3595 4029 -2 452 316 92 9 chr17 13672877 13673212 -71765268 - L1ME4a LINE L1 -29 6092 5730 24 0 0 0 chr17 13673339 13673363 -71765117 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr17 13673819 13673840 -71764640 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr17 13673870 13673893 -71764587 + AT_rich Low_complexity Low_complexity 1 23 0 480 135 0 27 chr17 13674044 13674118 -71764362 + AluS SINE Alu 2 73 -245 326 256 128 43 chr17 13674152 13674316 -71764164 + L1ME1 LINE L1 5971 6148 -18 1958 136 7 0 chr17 13674615 13674901 -71763579 - AluSx SINE Alu -24 288 1 2172 215 47 41 chr17 13674923 13675470 -71763010 - L1MC/D LINE L1 -743 5403 5275 2034 114 0 4 chr17 13675470 13675782 -71762698 + AluSg SINE Alu 1 311 0 2172 215 47 41 chr17 13675782 13675998 -71762482 - L1MC/D LINE L1 -871 5275 5062 1590 69 0 0 chr17 13676239 13676427 -71762053 - AluY SINE Alu -123 188 1 278 336 108 42 chr17 13676719 13676933 -71761547 - L2 LINE L2 -5 3267 3040 2076 133 27 0 chr17 13677084 13677385 -71761095 - AluSx SINE Alu -3 309 1 272 317 57 54 chr17 13677563 13677897 -71760583 + L1MC4a LINE L1 5617 5951 -1857 1013 255 143 74 chr17 13677945 13678420 -71760060 + MLT1H LTR MaLR 29 536 -13 265 266 43 11 chr17 13678445 13678539 -71759941 + L1ME4a LINE L1 5941 6037 -84 273 57 0 0 chr17 13678985 13679020 -71759460 + (ATG)n Simple_repeat Simple_repeat 2 36 0 237 289 117 23 chr17 13679424 13679552 -71758928 + MIR SINE MIR 50 189 -73 2049 113 11 11 chr17 13680044 13680326 -71758154 - AluSx SINE Alu -3 309 28 931 174 35 91 chr17 13681271 13681501 -71756979 - MER20 DNA MER1_type -2 217 1 328 196 49 84 chr17 13681502 13681645 -71756835 - MER112 DNA MER1_type -57 203 66 428 48 16 0 chr17 13682261 13682324 -71756156 + (CA)n Simple_repeat Simple_repeat 1 64 0 22 80 0 0 chr17 13683511 13683561 -71754919 + AT_rich Low_complexity Low_complexity 1 50 0 1701 143 44 0 chr17 13683714 13683987 -71754493 - AluJb SINE Alu -27 285 1 706 212 13 7 chr17 13684113 13684264 -71754216 + L1MD2 LINE L1 6191 6342 -17 240 326 37 37 chr17 13684294 13684484 -71753996 - L1M4 LINE L1 -3641 2505 2316 369 0 0 0 chr17 13685916 13685957 -71752523 + (TA)n Simple_repeat Simple_repeat 2 42 0 2485 72 3 19 chr17 13686076 13686394 -71752086 - AluSp SINE Alu 0 313 1 330 246 35 35 chr17 13687721 13687835 -71750645 + LTR16A LTR ERVL 1 114 -336 392 268 174 6 chr17 13687923 13688100 -71750380 + LTR16A LTR ERVL 191 439 -11 192 291 70 92 chr17 13688144 13688415 -71750065 - L2 LINE L2 -188 3084 2820 21 71 0 0 chr17 13688868 13688910 -71749570 + AT_rich Low_complexity Low_complexity 1 42 0 285 29 0 0 chr17 13689448 13689482 -71748998 + (CA)n Simple_repeat Simple_repeat 2 35 0 432 311 68 6 chr17 13689802 13689979 -71748501 - MIR SINE MIR -56 206 19 189 0 0 0 chr17 13692349 13692370 -71746110 + (CA)n Simple_repeat Simple_repeat 2 22 0 238 277 27 89 chr17 13692446 13692558 -71745922 + MIR SINE MIR 103 207 -55 203 341 23 11 chr17 13692717 13692805 -71745675 - MIR SINE MIR -6 256 168 3133 204 42 25 chr17 13693815 13693866 -71744614 + MER82 DNA MER2_type 1 50 -603 1581 158 0 79 chr17 13693866 13694182 -71744298 + AluJb SINE Alu 3 293 -19 2234 102 0 0 chr17 13694186 13694498 -71743982 + AluSp SINE Alu 1 312 0 3133 204 42 25 chr17 13694498 13695082 -71743398 + MER82 DNA MER2_type 52 653 0 651 230 5 97 chr17 13696159 13696355 -71742125 + MER45A DNA AcHobo 1 178 0 180 0 0 0 chr17 13696524 13696544 -71741936 + (TCCA)n Simple_repeat Simple_repeat 3 22 0 1065 272 139 25 chr17 13698302 13698740 -71739740 - MLT1H1 LTR MaLR -7 548 61 208 233 0 0 chr17 13699878 13699921 -71738559 + MIR3 SINE MIR 162 204 -4 1549 196 40 61 chr17 13701378 13701488 -71736992 + MLT1B LTR MaLR 5 116 -274 2047 139 3 7 chr17 13701488 13701790 -71736690 + AluSx SINE Alu 1 301 -11 1549 196 40 61 chr17 13701790 13702057 -71736423 + MLT1B LTR MaLR 116 374 -16 3560 192 52 28 chr17 13702094 13702809 -71735671 + MER21B LTR ERV1 19 750 -113 476 293 28 42 chr17 13702922 13702993 -71735487 + L3 LINE CR1 1207 1277 -300 697 62 0 0 chr17 13702993 13703073 -71735407 + MADE1 DNA Mariner 1 80 0 476 293 28 42 chr17 13703073 13703213 -71735267 + L3 LINE CR1 1277 1415 -162 228 267 17 0 chr17 13703365 13703425 -71735055 + MIR SINE MIR 68 128 -134 1871 123 7 18 chr17 13705161 13705437 -71733043 + AluSx SINE Alu 25 297 -15 2239 114 7 7 chr17 13705700 13706008 -71732472 - AluSc SINE Alu -1 308 1 277 173 77 0 chr17 13706222 13706274 -71732206 + L2 LINE L2 3216 3271 -1 311 290 100 0 chr17 13706342 13706442 -71732038 + MER103 DNA DNA 57 166 0 3091 218 56 22 chr17 13706666 13707378 -71731102 + MER21B LTR ERV1 21 756 -107 1457 237 31 20 chr17 13707579 13707933 -71730547 - MLT1A2 LTR MaLR -12 362 5 6614 84 11 2 chr17 13708050 13708869 -71729611 + LTR12 LTR ERV1 1 826 0 283 194 117 48 chr17 13709417 13709520 -71728960 + MER103 DNA DNA 2 111 -55 216 0 0 0 chr17 13709598 13709622 -71728858 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 897 256 104 42 chr17 13709687 13710073 -71728407 + MLT1J2 LTR MaLR 3 412 -38 368 224 55 91 chr17 13710078 13710150 -71728330 - MER96B DNA MER1_type? 0 417 344 261 0 0 0 chr17 13710150 13710179 -71728301 + (CAA)n Simple_repeat Simple_repeat 2 30 0 368 224 55 91 chr17 13710179 13710229 -71728251 - MER96B DNA MER1_type? -73 344 300 2361 71 3 0 chr17 13710229 13710525 -71727955 + AluY SINE Alu 1 297 -14 368 224 55 91 chr17 13710525 13710566 -71727914 - MER96B DNA MER1_type? -117 300 259 1630 104 0 9 chr17 13710568 13710790 -71727690 + AluSc SINE Alu 60 279 -30 859 83 0 0 chr17 13710681 13710790 -71727690 + AluSc SINE Alu 171 335 0 439 36 0 0 chr17 13710790 13710846 -71727634 + (TAAA)n Simple_repeat Simple_repeat 3 124 0 2416 88 0 10 chr17 13711516 13711823 -71726657 - AluSg SINE Alu -6 304 1 2288 76 0 3 chr17 13715668 13716000 -71722480 + AluY SINE Alu 1 331 0 2336 88 0 0 chr17 13716014 13716309 -71722171 + AluSg SINE Alu 1 295 -15 368 331 7 0 chr17 13717396 13717544 -71720936 + HAL1b LINE L1 381 529 -819 858 217 6 6 chr17 13717574 13717749 -71720731 + FAM SINE Alu 1 175 0 22 0 0 0 chr17 13717808 13717830 -71720650 + AT_rich Low_complexity Low_complexity 1 22 0 494 293 33 22 chr17 13718355 13718536 -71719944 + MIR SINE MIR 4 186 -76 321 177 30 67 chr17 13718887 13719051 -71719429 + (TTATA)n Simple_repeat Simple_repeat 2 159 0 261 0 0 0 chr17 13719258 13719287 -71719193 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 620 222 72 57 chr17 13719394 13719450 -71719030 - L1MC4 LINE L1 0 8042 7988 2478 80 3 0 chr17 13719450 13719761 -71718719 + AluSx SINE Alu 1 312 0 620 222 72 57 chr17 13719761 13719983 -71718497 - L1MC4 LINE L1 -54 7988 7760 466 294 17 28 chr17 13720485 13720665 -71717815 + MER5B DNA MER1_type 1 178 0 2107 124 0 23 chr17 13720828 13721134 -71717346 - AluSg SINE Alu -11 299 1 22 56 0 0 chr17 13723379 13723415 -71715065 + AT_rich Low_complexity Low_complexity 1 36 0 1396 146 0 5 chr17 13723823 13724036 -71714444 + MER2 DNA MER2_type 1 212 -133 240 225 0 0 chr17 13724087 13724127 -71714353 + MER2 DNA MER2_type 296 335 -10 2181 130 7 7 chr17 13724154 13724462 -71714018 - AluSx SINE Alu -2 310 3 2091 119 19 19 chr17 13724698 13725010 -71713470 + AluJb SINE Alu 1 312 0 512 291 53 102 chr17 13725285 13725480 -71713000 - L1MEd LINE L1 -4967 1152 949 15329 125 28 15 chr17 13725480 13727866 -71710614 + Tigger1 DNA MER2_type 1 2418 0 512 291 53 102 chr17 13727866 13728540 -71709940 - L1MEd LINE L1 -5170 949 326 1514 190 44 3 chr17 13729917 13730212 -71708268 - AluJb SINE Alu -5 307 1 180 0 0 0 chr17 13730297 13730317 -71708163 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 403 312 53 32 chr17 13730626 13730815 -71707665 - MARNA DNA Mariner -358 228 36 1959 152 3 0 chr17 13731199 13731501 -71706979 - AluSx SINE Alu -9 303 1 194 325 50 0 chr17 13731670 13731750 -71706730 - MIR3 SINE MIR -38 170 87 246 256 22 44 chr17 13732174 13732264 -71706216 - L2 LINE L2 -8 3305 3218 1239 228 70 31 chr17 13733140 13733495 -71704985 + MLT1A2 LTR MaLR 5 373 -1 2096 96 64 3 chr17 13733577 13733859 -71704621 - AluSx SINE Alu -13 299 1 2280 109 0 0 chr17 13733879 13734183 -71704297 + AluY SINE Alu 1 304 -7 821 239 28 0 chr17 13735371 13735547 -71702933 + MER5A DNA MER1_type 9 189 0 1535 250 109 42 chr17 13735574 13736098 -71702382 - MLT1F1 LTR MaLR -8 559 1 2707 118 0 0 chr17 13736338 13736702 -71701778 - THE1B LTR MaLR 0 364 1 232 340 26 26 chr17 13737037 13737190 -71701290 - MIR3 SINE MIR -5 203 51 198 0 0 0 chr17 13737310 13737332 -71701148 + (TG)n Simple_repeat Simple_repeat 2 23 0 819 288 39 10 chr17 13737374 13737680 -71700800 + L1ME4a LINE L1 5513 5827 -294 2083 104 3 50 chr17 13737708 13738025 -71700455 + AluSx SINE Alu 1 302 -10 192 328 78 0 chr17 13738102 13738166 -71700314 + L2 LINE L2 3204 3272 0 21 0 0 0 chr17 13738451 13738472 -71700008 + AT_rich Low_complexity Low_complexity 1 21 0 514 236 69 58 chr17 13738581 13738819 -71699661 + L1ME LINE L1 5505 5745 -376 2236 119 3 3 chr17 13738861 13739171 -71699309 + AluSx SINE Alu 1 310 -2 1216 103 139 5 chr17 13739222 13739416 -71699064 + AluSg/x SINE Alu 92 311 -1 266 104 0 119 chr17 13739889 13739956 -71698524 + L1MA7 LINE L1 6231 6289 -2 26 0 0 0 chr17 13739957 13739983 -71698497 + AT_rich Low_complexity Low_complexity 1 26 0 2297 103 7 0 chr17 13740053 13740355 -71698125 + AluSp SINE Alu 1 304 -9 23 0 0 0 chr17 13740538 13740561 -71697919 + AT_rich Low_complexity Low_complexity 1 23 0 1854 121 0 0 chr17 13740678 13740926 -71697554 + AluSx SINE Alu 52 299 -13 181 167 19 111 chr17 13741218 13741272 -71697208 + L3 LINE CR1 1523 1571 -6 989 98 0 7 chr17 13743894 13744047 -71694433 + (GGAA)n Simple_repeat Simple_repeat 4 155 0 2595 80 0 0 chr17 13744630 13744942 -71693538 - AluSx SINE Alu 0 312 1 2322 85 7 7 chr17 13745283 13745589 -71692891 - AluSc SINE Alu -3 306 1 1277 196 21 55 chr17 13745927 13746028 -71692452 + MER33 DNA MER1_type 10 113 -2472 2506 58 0 10 chr17 13746028 13746340 -71692140 + AluY SINE Alu 1 309 -2 1277 196 21 55 chr17 13746340 13746564 -71691916 + MER33 DNA MER1_type 113 324 0 2377 90 0 0 chr17 13746616 13746906 -71691574 + AluSc SINE Alu 1 290 -19 923 193 6 33 chr17 13747557 13747738 -71690742 + MER58A DNA MER1_type 49 224 0 275 224 6 138 chr17 13747947 13748121 -71690359 + MER112 DNA MER1_type 8 158 -102 2029 62 82 4 chr17 13748132 13748389 -71690091 - AluY SINE Alu -18 293 17 348 216 152 32 chr17 13748640 13748765 -71689715 + Charlie8 DNA MER1_type 116 255 -2162 204 40 0 0 chr17 13749109 13749134 -71689346 + (CA)n Simple_repeat Simple_repeat 2 26 0 2172 125 3 3 chr17 13750477 13750789 -71687691 - AluSx SINE Alu 0 312 1 2171 135 0 3 chr17 13751091 13751402 -71687078 - AluSx SINE Alu -2 310 1 386 248 44 24 chr17 13751600 13751734 -71686746 + MIR SINE MIR 26 162 -65 180 0 0 0 chr17 13752676 13752696 -71685784 + (A)n Simple_repeat Simple_repeat 1 20 0 2185 200 52 40 chr17 13753149 13753724 -71684756 - L1MD3 LINE L1 -11 7984 7403 279 0 0 0 chr17 13755289 13755320 -71683160 + (TTG)n Simple_repeat Simple_repeat 1 31 0 279 0 0 0 chr17 13755861 13755892 -71682588 + (CA)n Simple_repeat Simple_repeat 2 32 0 201 283 0 0 chr17 13756632 13756685 -71681795 + (TA)n Simple_repeat Simple_repeat 1 53 0 24 0 0 0 chr17 13760256 13760280 -71678200 + GC_rich Low_complexity Low_complexity 1 24 0 180 0 0 0 chr17 13761279 13761299 -71677181 + (GGCTG)n Simple_repeat Simple_repeat 1 20 0 23 0 0 0 chr17 13762179 13762202 -71676278 + AT_rich Low_complexity Low_complexity 1 23 0 270 0 0 0 chr17 13762273 13762303 -71676177 + (TG)n Simple_repeat Simple_repeat 1 30 0 211 172 259 0 chr17 13763173 13763231 -71675249 + MIR3 SINE MIR 118 190 -18 1295 162 14 22 chr17 13763423 13763645 -71674835 - AluJb SINE Alu -12 300 81 1036 187 66 19 chr17 13763652 13763909 -71674571 - MER33 DNA MER1_type -54 270 2 423 289 144 26 chr17 13763937 13764131 -71674349 - LTR33 LTR ERVL 0 521 305 330 146 0 0 chr17 13764528 13764583 -71673897 - MLT2B2 LTR ERVL -2 513 459 2324 182 69 52 chr17 13764607 13764913 -71673567 - MLT2B3 LTR ERVL -22 532 212 2325 104 0 0 chr17 13764913 13765211 -71673269 + AluSx SINE Alu 1 298 -14 2324 182 69 52 chr17 13765211 13765427 -71673053 - MLT2B3 LTR ERVL -342 212 1 285 243 18 45 chr17 13766198 13766309 -71672171 - LTR33 LTR ERVL -338 183 76 2412 93 3 0 chr17 13766506 13766816 -71671664 - AluSp SINE Alu -2 311 1 301 285 96 105 chr17 13766839 13767172 -71671308 + L2 LINE L2 2938 3267 -5 2017 113 39 0 chr17 13767231 13767515 -71670965 + AluSp SINE Alu 6 300 -13 2326 95 20 0 chr17 13768028 13768332 -71670148 + AluSg SINE Alu 1 310 0 240 111 0 0 chr17 13768739 13768775 -71669705 + (A)n Simple_repeat Simple_repeat 1 36 0 23 33 0 0 chr17 13768901 13768931 -71669549 + AT_rich Low_complexity Low_complexity 1 30 0 445 291 16 8 chr17 13768996 13769123 -71669357 + MER91B DNA MER1_type 50 177 -13 760 302 178 10 chr17 13769262 13769679 -71668801 + MLT1K LTR MaLR 40 526 -62 1873 176 0 0 chr17 13769748 13770054 -71668426 - AluJb SINE Alu -6 306 1 1044 113 0 0 chr17 13770121 13770262 -71668218 - AluY SINE Alu -9 302 162 182 390 55 20 chr17 13770916 13771116 -71667364 - L2 LINE L2 -657 2657 2451 482 191 162 7 chr17 13771926 13772062 -71666418 - MER103 DNA DNA -7 159 3 1738 225 69 29 chr17 13774860 13775309 -71663171 - MLT1C LTR MaLR 0 467 1 2222 87 3 7 chr17 13775355 13775671 -71662809 + AluSp SINE Alu 1 315 0 620 308 44 24 chr17 13775696 13775946 -71662534 - MIR SINE MIR 0 262 8 1258 225 25 74 chr17 13776509 13776833 -71661647 + AluJb SINE Alu 1 308 -4 1239 201 146 17 chr17 13777285 13777573 -71660907 + MLT1A2 LTR MaLR 3 327 -47 676 316 110 51 chr17 13777591 13778517 -71659963 - L1M4 LINE L1 -1451 4695 3715 263 275 12 12 chr17 13779292 13779372 -71659108 - MER116 DNA Mariner 0 80 1 543 278 96 13 chr17 13779992 13780317 -71658163 + L1MC4a LINE L1 5563 5778 -343 710 83 0 0 chr17 13780410 13780523 -71657957 - AluSp/q SINE Alu 0 313 201 304 353 38 50 chr17 13780833 13781071 -71657409 - L1M4 LINE L1 -2967 3179 2945 387 286 29 14 chr17 13781072 13781212 -71657268 - MIR SINE MIR -5 257 116 942 305 59 53 chr17 13781215 13781720 -71656760 + MLT1K LTR MaLR 71 578 -10 256 238 0 16 chr17 13781831 13781894 -71656586 + (TTTA)n Simple_repeat Simple_repeat 3 64 0 1243 296 65 100 chr17 13781991 13782528 -71655952 - L2 LINE L2 -566 2748 2193 2017 161 0 0 chr17 13782528 13782832 -71655648 - AluSx SINE Alu -8 304 1 1243 296 65 100 chr17 13782832 13782972 -71655508 - L2 LINE L2 -1121 2193 2050 1211 178 73 128 chr17 13782972 13783214 -71655266 - MLT1A1 LTR MaLR 0 365 150 1471 94 13 73 chr17 13783214 13783447 -71655033 - AluSc SINE Alu -16 293 75 1211 178 73 128 chr17 13783447 13783587 -71654893 - MLT1A1 LTR MaLR -215 150 4 1243 296 65 100 chr17 13783587 13784008 -71654472 - L2 LINE L2 -1264 2050 1688 2250 163 75 2 chr17 13784117 13784517 -71653963 - LTR47A LTR ERVL -23 429 1 279 290 173 43 chr17 13784517 13784679 -71653801 - L2 LINE L2 -1725 1589 1407 194 360 79 14 chr17 13784658 13784797 -71653683 + L2 LINE L2 833 980 -2334 * 449 307 113 65 chr17 13784846 13785204 -71653276 - L2 LINE L2 -1944 1370 990 2317 90 0 28 chr17 13785204 13785526 -71652954 + AluSq SINE Alu 1 313 0 449 307 113 65 chr17 13785526 13785564 -71652916 - L2 LINE L2 -2324 990 955 2482 84 0 0 chr17 13785703 13786012 -71652468 - AluSx SINE Alu -2 310 2 482 210 84 118 chr17 13786013 13786251 -71652229 + MER112 DNA MER1_type 29 258 -2 375 276 24 16 chr17 13786253 13786376 -71652104 - L2 LINE L2 -2511 803 680 243 150 0 0 chr17 13786412 13786452 -71652028 - MER3 DNA MER1_type -14 195 156 1526 215 109 36 chr17 13786461 13786991 -71651489 - L1ME1 LINE L1 -4 6162 5594 557 239 182 0 chr17 13787492 13787651 -71650829 - MER5A DNA MER1_type -1 188 1 232 274 137 29 chr17 13787676 13787778 -71650702 + MIR SINE MIR 47 159 -103 2466 86 0 0 chr17 13787786 13788088 -71650392 + AluSc SINE Alu 1 302 -7 342 115 0 0 chr17 13788088 13788140 -71650340 + (TA)n Simple_repeat Simple_repeat 2 53 0 2029 125 7 33 chr17 13788796 13789101 -71649379 + AluSx SINE Alu 1 297 -15 201 74 0 0 chr17 13789183 13789210 -71649270 + (TAA)n Simple_repeat Simple_repeat 2 28 0 2310 89 0 10 chr17 13789288 13789591 -71648889 + AluSg SINE Alu 1 300 -10 1981 161 49 122 chr17 13789710 13790099 -71648381 + LTR32 LTR ERVL 15 362 -109 2811 63 0 0 chr17 13790099 13790433 -71648047 + L1PA5 LINE L1 5818 6151 -3 1981 161 49 122 chr17 13790433 13790533 -71647947 + LTR32 LTR ERVL 362 468 -3 275 320 79 28 chr17 13790602 13790780 -71647700 - MIR SINE MIR -14 248 62 288 252 61 87 chr17 13791551 13791630 -71646850 - MIR SINE MIR -55 207 130 2337 95 7 0 chr17 13791630 13791926 -71646554 + AluSc SINE Alu 1 298 -11 288 252 61 87 chr17 13791926 13791961 -71646519 - MIR SINE MIR -132 130 96 1921 90 83 21 chr17 13792493 13792783 -71645697 - AluSc SINE Alu 0 309 2 2395 77 0 0 chr17 13793063 13793360 -71645120 - AluY SINE Alu -14 297 1 2148 123 3 0 chr17 13794107 13794407 -71644073 + AluSp SINE Alu 1 301 -12 2009 121 7 4 chr17 13794753 13795034 -71643446 + AluSc SINE Alu 1 282 -27 414 0 0 0 chr17 13795034 13795080 -71643400 + (CA)n Simple_repeat Simple_repeat 2 47 0 358 256 37 26 chr17 13795149 13795319 -71643161 + HAL1b LINE L1 343 1597 -864 204 214 14 29 chr17 13795357 13795418 -71643062 + (TA)n Simple_repeat Simple_repeat 2 63 -7 2585 169 58 9 chr17 13795418 13795863 -71642617 - LTR24 LTR ERV1 0 467 1 204 214 14 29 chr17 13795863 13795871 -71642609 + (TA)n Simple_repeat Simple_repeat 63 70 0 32 0 0 0 chr17 13795944 13795976 -71642504 + AT_rich Low_complexity Low_complexity 1 32 0 228 163 0 0 chr17 13796206 13796249 -71642231 + A-rich Low_complexity Low_complexity 1 43 0 2593 173 86 49 chr17 13796300 13796890 -71641590 - LTR9 LTR ERV1 0 612 1 2169 109 26 0 chr17 13797107 13797409 -71641071 + AluSp SINE Alu 3 312 -1 22 35 0 0 chr17 13797512 13797541 -71640939 + AT_rich Low_complexity Low_complexity 1 29 0 21 71 0 0 chr17 13797920 13797962 -71640518 + AT_rich Low_complexity Low_complexity 1 42 0 752 258 26 82 chr17 13798220 13798423 -71640057 + MIR SINE MIR 10 196 -66 4422 129 9 5 chr17 13798423 13799053 -71639427 + MER41B LTR ERV1 3 635 0 752 258 26 82 chr17 13799053 13799117 -71639363 + MIR SINE MIR 196 262 0 21 36 0 0 chr17 13799631 13799659 -71638821 + AT_rich Low_complexity Low_complexity 1 28 0 1822 198 101 60 chr17 13799892 13800559 -71637921 + LTR48 LTR ERV1 3 644 0 246 32 0 0 chr17 13800943 13800974 -71637506 + (TG)n Simple_repeat Simple_repeat 2 32 0 339 207 37 24 chr17 13801618 13801700 -71636780 + MER5A DNA MER1_type 86 168 -21 762 183 39 0 chr17 13803315 13803468 -71635012 + MER5A DNA MER1_type 3 161 -28 613 208 57 0 chr17 13803592 13803698 -71634782 + MER81 DNA DNA 3 114 0 1783 90 113 19 chr17 13803936 13804220 -71634260 + AluSc SINE Alu 1 308 0 552 299 116 9 chr17 13804882 13805106 -71633374 + MIR SINE MIR 5 252 -10 219 334 32 60 chr17 13805968 13806123 -71632357 - MIR SINE MIR -79 183 35 275 231 0 0 chr17 13806339 13806391 -71632089 - MIR SINE MIR 0 262 211 969 164 7 0 chr17 13806406 13806558 -71631922 + FRAM SINE Alu 2 154 -22 259 224 121 5 chr17 13806597 13806699 -71631781 - MIR SINE MIR -47 161 52 1538 199 70 64 chr17 13808209 13808478 -71630002 - MLT1B LTR MaLR 0 390 117 1918 173 0 0 chr17 13808478 13808778 -71629702 - AluJb SINE Alu -12 300 1 1538 199 70 64 chr17 13808778 13808896 -71629584 - MLT1B LTR MaLR -273 117 1 211 315 22 0 chr17 13809764 13809853 -71628627 + MIR SINE MIR 30 120 -88 289 337 21 11 chr17 13810011 13810106 -71628374 - L2 LINE L2 -30 3242 3147 2219 255 62 35 chr17 13810240 13811258 -71627222 + L1ME3 LINE L1 5029 6083 -79 1358 97 44 117 chr17 13811258 13811327 -71627153 + MER30 DNA MER1_type 1 73 -157 1825 122 0 43 chr17 13811327 13811605 -71626875 + AluSg SINE Alu 31 296 -14 1358 97 44 117 chr17 13811605 13811783 -71626697 + MER30 DNA MER1_type 73 230 0 2219 255 62 35 chr17 13811783 13811835 -71626645 + L1ME3 LINE L1 6083 6132 -30 2471 69 0 3 chr17 13811937 13812242 -71626238 + AluY SINE Alu 1 304 -7 1869 178 57 9 chr17 13812357 13812689 -71625791 - MER7A DNA MER2_type 0 346 1 228 191 0 21 chr17 13812727 13812774 -71625706 + CT-rich Low_complexity Low_complexity 2 47 0 225 250 0 0 chr17 13812774 13812818 -71625662 - MER5B DNA MER1_type -134 44 1 662 311 56 15 chr17 13813052 13813319 -71625161 + MLT1F LTR MaLR 36 313 -229 22 56 0 0 chr17 13813763 13813799 -71624681 + AT_rich Low_complexity Low_complexity 1 36 0 22 35 0 0 chr17 13813893 13813922 -71624558 + AT_rich Low_complexity Low_complexity 1 29 0 2518 149 49 8 chr17 13814634 13815104 -71623376 - L1MB3 LINE L1 -16 6167 5679 2558 133 26 14 chr17 13815310 13815731 -71622749 + MSTB LTR MaLR 1 426 0 237 250 22 11 chr17 13816307 13816399 -71622081 + (TATATG)n Simple_repeat Simple_repeat 4 96 0 1073 247 84 77 chr17 13816502 13816956 -71621524 - L2 LINE L2 -32 3281 2825 335 104 0 0 chr17 13817057 13817105 -71621375 + MER74B LTR ERVL 1 48 -574 263 316 5 31 chr17 13817882 13818078 -71620402 + L1ME4a LINE L1 5830 6020 -101 * 2033 236 57 35 chr17 13818067 13818348 -71620132 + L1ME LINE L1 272 545 -5525 2337 78 3 16 chr17 13818348 13818657 -71619823 + AluY SINE Alu 3 307 -4 2033 236 57 35 chr17 13818657 13819116 -71619364 + L1ME LINE L1 545 1028 -5042 2239 107 0 0 chr17 13819175 13819475 -71619005 + AluSg SINE Alu 1 300 -10 302 179 164 8 chr17 13819672 13819806 -71618674 - L1ME LINE L1 -375 5746 5592 235 218 26 26 chr17 13819794 13819872 -71618608 - L1ME3A LINE L1 0 6170 6093 * 270 319 22 0 chr17 13819902 13820037 -71618443 - L1M4 LINE L1 -1481 4665 4528 412 180 16 0 chr17 13820037 13820159 -71618321 + (TA)n Simple_repeat Simple_repeat 2 125 0 1921 264 96 29 chr17 13820224 13821559 -71616921 - L1ME2 LINE L1 -3 6161 4744 738 192 14 70 chr17 13821724 13821938 -71616542 - L1MA9 LINE L1 -30 6282 6081 257 336 47 19 chr17 13821971 13822078 -71616402 + L2 LINE L2 3199 3308 -5 26 0 0 0 chr17 13822376 13822402 -71616078 + AT_rich Low_complexity Low_complexity 1 26 0 304 308 105 21 chr17 13822472 13822615 -71615865 + MIR3 SINE MIR 5 159 -49 235 300 15 15 chr17 13823431 13823524 -71614956 + (TA)n Simple_repeat Simple_repeat 1 96 -34 8988 102 16 12 chr17 13823524 13823873 -71614607 + HSMAR1 DNA Mariner 3 349 -938 2295 74 0 20 chr17 13823873 13824172 -71614308 + AluY SINE Alu 1 293 -18 8988 102 16 12 chr17 13824172 13825103 -71613377 + HSMAR1 DNA Mariner 349 1287 0 235 300 15 15 chr17 13825103 13825139 -71613341 + (TA)n Simple_repeat Simple_repeat 95 130 0 22 56 0 0 chr17 13825568 13825604 -71612876 + AT_rich Low_complexity Low_complexity 1 36 0 1703 146 60 27 chr17 13825690 13826059 -71612421 - SVA Other Other -573 813 433 27 0 0 0 chr17 13826135 13826162 -71612318 + AT_rich Low_complexity Low_complexity 1 27 0 279 0 0 0 chr17 13826185 13826216 -71612264 + (GA)n Simple_repeat Simple_repeat 2 32 0 2093 112 0 0 chr17 13826217 13826494 -71611986 - AluSx SINE Alu -35 277 1 12694 192 50 46 chr17 13826775 13829666 -71608814 + L1M2 LINE L1 1 2902 -3947 4781 186 18 24 chr17 13829664 13830774 -71607706 + L1M2 LINE L1 3775 4877 -1971 * 13173 217 32 56 chr17 13830803 13833162 -71605318 + L1P5 LINE L1 3 2418 -4449 653 147 0 0 chr17 13833162 13833257 -71605223 - AluSp/q SINE Alu -31 282 188 13173 217 32 56 chr17 13833257 13833949 -71604531 + L1P5 LINE L1 2418 3125 -3742 1811 128 23 56 chr17 13833949 13834255 -71604225 - AluSq SINE Alu 0 313 18 13173 217 32 56 chr17 13834255 13834320 -71604160 + L1P5 LINE L1 3125 3190 -3677 1306 73 12 0 chr17 13834320 13834484 -71603996 + AluY SINE Alu 130 295 -16 13173 217 32 56 chr17 13834484 13836092 -71602388 + L1P5 LINE L1 3190 4646 -2221 731 179 0 0 chr17 13836092 13836209 -71602271 + FLAM_C SINE Alu 1 117 -16 13173 217 32 56 chr17 13836209 13837766 -71600714 + L1P5 LINE L1 4646 6240 -627 483 278 42 21 chr17 13838370 13838514 -71599966 + MIR3 SINE MIR 58 204 -4 183 200 0 0 chr17 13838651 13838686 -71599794 - MIR SINE MIR -2 260 226 2468 32 0 3 chr17 13839780 13840064 -71598416 - AluY SINE Alu 0 311 29 231 0 50 25 chr17 13840234 13840274 -71598206 + (CAAAAA)n Simple_repeat Simple_repeat 2 42 0 1409 213 26 3 chr17 13841030 13841340 -71597140 - L1ME2 LINE L1 -8 6550 6234 2225 253 96 53 chr17 13841348 13842607 -71595873 - L1ME2 LINE L1 -1062 5478 4166 22 35 0 0 chr17 13842897 13842926 -71595554 + AT_rich Low_complexity Low_complexity 1 29 0 873 288 81 28 chr17 13842926 13843347 -71595133 - L1ME2 LINE L1 -4549 1991 1627 2197 279 93 29 chr17 13843361 13843682 -71594798 - L1MEc LINE L1 -2365 3850 3551 306 0 0 0 chr17 13843682 13843716 -71594764 + (TG)n Simple_repeat Simple_repeat 1 34 0 2197 279 93 29 chr17 13843716 13845122 -71593358 - L1MEc LINE L1 -2664 3551 1958 1368 225 15 0 chr17 13845132 13845403 -71593077 + AluJo SINE Alu 21 295 -17 6231 191 59 50 chr17 13845521 13846562 -71591918 - L1MC3 LINE L1 -8 7777 6747 2106 153 0 6 chr17 13846562 13846876 -71591604 + AluSx SINE Alu 1 312 0 6231 191 59 50 chr17 13846876 13847205 -71591275 - L1MC3 LINE L1 -1038 6747 6389 2336 154 50 21 chr17 13847205 13847627 -71590853 + Tigger2a DNA MER2_type 1 434 0 6231 191 59 50 chr17 13847627 13847804 -71590676 - L1MC3 LINE L1 -1396 6389 6215 1819 158 40 3 chr17 13847805 13848102 -71590378 - AluJb SINE Alu -4 308 1 361 237 18 9 chr17 13848177 13848291 -71590189 - L1P LINE L1 -1045 5101 4987 * 1144 235 131 70 chr17 13848283 13848695 -71589785 - L1P3 LINE L1 -6015 446 10 3741 222 46 39 chr17 13848710 13848822 -71589658 - L1MC3 LINE L1 -743 5403 5293 7073 46 14 1 chr17 13848822 13850237 -71588243 + L1PA7 LINE L1 4719 6146 -8 3741 222 46 39 chr17 13850237 13852026 -71586454 - L1MC3 LINE L1 -853 5293 4313 1302 244 152 18 chr17 13852027 13852421 -71586059 - MER82 DNA MER2_type -1 652 206 636 190 8 0 chr17 13852733 13852854 -71585626 - MER82 DNA MER2_type -451 202 81 644 118 0 9 chr17 13852887 13852997 -71585483 + (TTCC)n Simple_repeat Simple_repeat 3 111 0 723 191 109 0 chr17 13853066 13853213 -71585267 + MER5A DNA MER1_type 2 164 -25 259 230 240 20 chr17 13853309 13853409 -71585071 - MIR SINE MIR -100 162 41 2192 69 0 41 chr17 13853409 13853699 -71584781 + AluY SINE Alu 28 305 -6 2348 97 0 3 chr17 13853869 13854180 -71584300 + AluSg SINE Alu 1 310 0 260 140 228 18 chr17 13855878 13855935 -71582545 + Tigger2 DNA MER2_type 1 69 -2649 * 2574 148 25 9 chr17 13855925 13856363 -71582117 + Tigger2 DNA MER2_type 2273 2717 -1 345 238 89 20 chr17 13856650 13856794 -71581686 - MIR SINE MIR -57 151 39 359 169 13 26 chr17 13856929 13857006 -71581474 - MER116 DNA Mariner -1 79 4 2549 7 0 0 chr17 13857181 13857456 -71581024 + AluY SINE Alu 37 311 0 1727 183 3 0 chr17 13857975 13858285 -71580195 + AluJo SINE Alu 1 311 0 602 241 84 66 chr17 13858907 13859151 -71579329 - MLT1J2 LTR MaLR -2 444 194 1159 217 42 42 chr17 13859151 13859354 -71579126 + MER58B DNA MER1_type 5 210 -2210 2212 89 0 10 chr17 13859354 13859645 -71578835 - AluSx SINE Alu -24 288 1 1159 217 42 42 chr17 13859645 13859778 -71578702 + MER58B DNA MER1_type 209 341 0 602 241 84 66 chr17 13859778 13859920 -71578560 - MLT1J2 LTR MaLR -252 194 56 2267 89 14 0 chr17 13860033 13860326 -71578154 - AluSx SINE Alu -15 297 1 201 74 0 0 chr17 13860402 13860429 -71578051 + (TG)n Simple_repeat Simple_repeat 2 28 0 585 158 110 8 chr17 13860491 13860618 -71577862 - MLT1B LTR MaLR -222 168 29 471 229 27 3 chr17 13861219 13862115 -71576365 + (TATATG)n Simple_repeat Simple_repeat 1 916 0 267 31 0 0 chr17 13862292 13862324 -71576156 + (TG)n Simple_repeat Simple_repeat 1 32 0 221 271 21 0 chr17 13862375 13862423 -71576057 - L2 LINE L2 -90 3182 3134 1127 226 5 0 chr17 13863586 13863807 -71574673 + MER58A DNA MER1_type 1 222 -2 925 232 94 3 chr17 13864622 13864919 -71573561 - MER33 DNA MER1_type 0 324 1 2333 100 0 10 chr17 13865081 13865391 -71573089 - AluSc SINE Alu -2 307 1 23 0 0 0 chr17 13865400 13865423 -71573057 + AT_rich Low_complexity Low_complexity 1 23 0 1446 131 16 0 chr17 13865423 13865668 -71572812 - L1MA2 LINE L1 0 6304 6056 512 296 31 23 chr17 13865691 13865948 -71572532 - MIR SINE MIR 0 262 4 2122 112 34 0 chr17 13866472 13866766 -71571714 - AluSc SINE Alu -5 304 1 23 68 0 0 chr17 13866971 13867015 -71571465 + AT_rich Low_complexity Low_complexity 1 44 0 280 309 83 25 chr17 13867104 13867420 -71571060 - L1ME4a LINE L1 -104 6017 5684 784 299 5 5 chr17 13867663 13867877 -71570603 + MIR SINE MIR 23 236 -26 305 271 85 65 chr17 13867940 13868413 -71570067 - L1ME4a LINE L1 -1823 4323 3842 280 286 41 67 chr17 13868697 13869085 -71569395 - L1ME4a LINE L1 -2686 3460 3083 1659 200 67 9 chr17 13869212 13869557 -71568923 - MLT1A1 LTR MaLR 0 365 1 270 56 0 0 chr17 13869647 13869683 -71568797 + (CA)n Simple_repeat Simple_repeat 1 36 0 183 238 0 24 chr17 13869843 13869885 -71568595 - MIR3 SINE MIR -24 184 144 21 0 0 0 chr17 13869887 13869908 -71568572 + AT_rich Low_complexity Low_complexity 1 21 0 412 253 235 12 chr17 13870635 13870801 -71567679 - MIR SINE MIR -3 259 57 368 353 87 71 chr17 13870963 13871652 -71566828 + L2 LINE L2 2490 3196 -76 277 311 139 7 chr17 13873835 13873986 -71564494 + MIR3 SINE MIR 31 201 -7 193 146 42 0 chr17 13874563 13874611 -71563869 + (TA)n Simple_repeat Simple_repeat 2 51 0 319 272 0 22 chr17 13874616 13874708 -71563772 + L1MC4 LINE L1 6614 6703 -1339 308 150 16 102 chr17 13874684 13874811 -71563669 - L1MC4 LINE L1 -1339 6983 1995 * 308 115 26 115 chr17 13874838 13874916 -71563564 - L1MC4 LINE L1 -4361 2065 1995 308 115 26 115 chr17 13874943 13875021 -71563459 - L1MC4 LINE L1 -4361 2065 1995 308 115 26 115 chr17 13875048 13875126 -71563354 - L1MC4 LINE L1 -4361 2065 1995 308 115 26 115 chr17 13875153 13875231 -71563249 - L1MC4 LINE L1 -4361 2065 1995 320 118 26 92 chr17 13875258 13875334 -71563146 - L1MC4 LINE L1 -4361 2065 1995 619 190 17 11 chr17 13875338 13875517 -71562963 + (TA)n Simple_repeat Simple_repeat 1 180 0 523 216 11 17 chr17 13875536 13875717 -71562763 + (TA)n Simple_repeat Simple_repeat 1 180 0 472 229 17 11 chr17 13875736 13876080 -71562400 + (TA)n Simple_repeat Simple_repeat 1 345 0 527 224 23 0 chr17 13876093 13876267 -71562213 + (TA)n Simple_repeat Simple_repeat 1 178 0 1716 106 0 21 chr17 13876267 13876502 -71561978 - AluSg/x SINE Alu -14 296 67 282 289 58 58 chr17 13876503 13876728 -71561752 - L1ME LINE L1 -422 5699 5475 865 143 0 36 chr17 13876788 13876928 -71561552 + AluJo SINE Alu 1 135 -177 2435 127 5 19 chr17 13877335 13877704 -71560776 + THE1B LTR MaLR 1 364 0 1013 194 148 26 chr17 13877865 13878169 -71560311 + MER2 DNA MER2_type 3 343 -1 239 197 13 40 chr17 13878190 13878266 -71560214 + T-rich Low_complexity Low_complexity 2 75 0 552 232 72 0 chr17 13878504 13878629 -71559851 + MIR SINE MIR 104 237 -25 684 287 141 17 chr17 13878935 13879290 -71559190 - MLT1J LTR MaLR -44 467 69 207 0 0 0 chr17 13880330 13880353 -71558127 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 182 36 0 36 chr17 13880592 13880620 -71557860 + (TTTTC)n Simple_repeat Simple_repeat 3 29 0 336 24 0 0 chr17 13882067 13882108 -71556372 + (TG)n Simple_repeat Simple_repeat 2 42 0 358 276 0 75 chr17 13882573 13882707 -71555773 + MIR SINE MIR 1 124 -84 287 298 62 56 chr17 13882733 13882911 -71555569 + MIR SINE MIR 73 251 -11 252 351 58 39 chr17 13882911 13883065 -71555415 - MIR SINE MIR -86 176 20 184 239 0 22 chr17 13883384 13883430 -71555050 + L2 LINE L2 3266 3310 -3 194 320 97 29 chr17 13884200 13884303 -71554177 + L2 LINE L2 3204 3313 0 651 177 65 0 chr17 13884331 13884455 -71554025 - AluSp/q SINE Alu -9 304 173 339 229 38 38 chr17 13884851 13884956 -71553524 - L1M4 LINE L1 -2091 4055 3951 265 231 98 92 chr17 13885503 13885676 -71552804 - MLT1H LTR MaLR 0 549 376 979 298 23 33 chr17 13886052 13886441 -71552039 + LTR16C LTR ERVL 97 481 -10 354 336 67 44 chr17 13887039 13887122 -71551358 - L2 LINE L2 -40 3273 3193 2300 103 10 68 chr17 13887122 13887289 -71551191 + THE1C LTR MaLR 1 176 -199 2013 78 4 4 chr17 13887289 13887545 -71550935 - AluY SINE Alu -1 310 55 2300 103 10 68 chr17 13887545 13887775 -71550705 + THE1C LTR MaLR 176 375 0 8194 151 36 32 chr17 13887775 13889348 -71549132 + THE1C-int LTR MaLR 1 1580 0 2473 105 21 16 chr17 13889348 13889721 -71548759 + THE1C LTR MaLR 1 375 0 354 336 67 44 chr17 13889721 13890040 -71548440 - L2 LINE L2 -119 3194 2860 368 227 18 18 chr17 13890151 13890261 -71548219 + L1ME LINE L1 5511 5620 -501 207 87 0 65 chr17 13890268 13890314 -71548166 + (TTTAA)n Simple_repeat Simple_repeat 1 43 0 1566 126 0 34 chr17 13890334 13890603 -71547877 - L1PB4 LINE L1 -24 6132 5873 759 319 133 24 chr17 13892522 13893126 -71545354 + L2 LINE L2 2578 3262 -51 2134 156 71 22 chr17 13893126 13893537 -71544943 + Tigger2a DNA MER2_type 4 434 0 759 319 133 24 chr17 13893537 13893596 -71544884 + L2 LINE L2 3262 3313 0 255 350 30 26 chr17 13893819 13893992 -71544488 - MER5A DNA MER1_type 0 189 1 525 252 15 28 chr17 13894007 13894154 -71544326 + MER5B DNA MER1_type 49 177 -1 338 304 174 0 chr17 13894163 13894301 -71544179 - MER5A DNA MER1_type 0 189 28 2784 163 125 37 chr17 13894413 13894617 -71543863 + MER39 LTR ERV1 2 187 -520 2348 107 0 3 chr17 13894617 13894926 -71543554 + AluSg SINE Alu 3 310 0 2784 163 125 37 chr17 13894926 13895370 -71543110 + MER39 LTR ERV1 187 707 0 2498 77 0 0 chr17 13895595 13895906 -71542574 + AluY SINE Alu 1 311 0 230 346 142 0 chr17 13896754 13896881 -71541599 + MIR3 SINE MIR 61 205 -3 211 150 0 25 chr17 13899196 13899236 -71539244 + (TAA)n Simple_repeat Simple_repeat 2 40 0 708 189 31 0 chr17 13899301 13899428 -71539052 + MER5A DNA MER1_type 56 186 -3 479 294 56 11 chr17 13899547 13899727 -71538753 + MIR3 SINE MIR 18 205 -3 26 30 0 0 chr17 13900194 13900227 -71538253 + AT_rich Low_complexity Low_complexity 1 33 0 411 232 249 28 chr17 13900519 13900696 -71537784 - MIR SINE MIR -39 223 8 189 268 122 12 chr17 13900704 13900786 -71537694 - MIR3 SINE MIR -36 172 82 383 213 63 63 chr17 13900821 13900835 -71537645 + MER5B DNA MER1_type 51 64 -114 1930 116 6 77 chr17 13900835 13901007 -71537473 + AluSx SINE Alu 2 142 -170 690 65 0 0 chr17 13901007 13901099 -71537381 + (TAAAA)n Simple_repeat Simple_repeat 4 95 0 1930 116 6 77 chr17 13901099 13901253 -71537227 + AluSx SINE Alu 142 305 -7 383 213 63 63 chr17 13901253 13901365 -71537115 + MER5B DNA MER1_type 63 177 -1 239 235 31 71 chr17 13901876 13901974 -71536506 + L3 LINE CR1 1223 1316 -261 219 231 31 31 chr17 13902623 13902688 -71535792 - MIR SINE MIR -65 143 79 813 157 7 59 chr17 13902711 13902864 -71535616 - AluJb SINE Alu -133 179 35 2026 141 16 0 chr17 13902892 13903197 -71535283 + AluSx SINE Alu 3 312 0 211 256 0 0 chr17 13903199 13903238 -71535242 + polypurine Low_complexity Low_complexity 4 42 0 745 208 122 28 chr17 13903377 13903665 -71534815 + MER39 LTR ERV1 393 707 0 238 284 66 25 chr17 13903686 13903883 -71534597 - L1MC5 LINE L1 -170 7791 7587 240 111 0 0 chr17 13904860 13904896 -71533584 + (A)n Simple_repeat Simple_repeat 1 36 0 22 0 0 0 chr17 13905029 13905051 -71533429 + AT_rich Low_complexity Low_complexity 1 22 0 1817 94 0 12 chr17 13905561 13905806 -71532674 - AluSg/x SINE Alu -2 308 67 451 286 75 53 chr17 13905890 13906208 -71532272 + Charlie8 DNA MER1_type 85 409 -2008 2334 77 0 46 chr17 13906391 13906715 -71531765 - AluSc SINE Alu 0 309 1 255 329 27 0 chr17 13906981 13907054 -71531426 + L2 LINE L2 3193 3267 -5 783 206 138 5 chr17 13907596 13907785 -71530695 - MER58A DNA MER1_type -10 214 1 200 322 22 11 chr17 13907918 13908008 -71530472 - L2 LINE L2 -8 3264 3174 212 305 58 58 chr17 13908663 13908837 -71529643 - L2 LINE L2 -221 3051 2878 302 224 153 10 chr17 13908947 13909045 -71529435 + L2 LINE L2 3155 3266 -6 601 267 11 0 chr17 13909254 13909434 -71529046 + MLT1H LTR MaLR 2 183 -366 1374 219 99 39 chr17 13909441 13909933 -71528547 - MER39 LTR ERV1 0 682 6 531 238 119 75 chr17 13909910 13910271 -71528209 + MLT1H LTR MaLR 173 549 0 * 269 136 0 0 chr17 13911246 13911290 -71527190 - L2 LINE L2 -1 3312 3269 287 302 16 24 chr17 13912685 13912815 -71525665 + MER5A DNA MER1_type 16 155 -34 2082 134 76 8 chr17 13913016 13913412 -71525068 - MSTA LTR MaLR 0 428 6 475 256 100 43 chr17 13913412 13913693 -71524787 - L2 LINE L2 -28 3285 2989 669 161 115 35 chr17 13913700 13913725 -71524755 - MER53 DNA DNA 0 189 167 1761 178 39 34 chr17 13913725 13914113 -71524367 + MLT1B LTR MaLR 1 390 0 669 161 115 35 chr17 13914113 13914261 -71524219 - MER53 DNA DNA -22 167 2 292 267 58 12 chr17 13914264 13914350 -71524130 - L2 LINE L2 -322 2991 2902 2123 189 36 5 chr17 13914377 13914822 -71523658 + MER65C LTR ERV1 1 459 -2 1813 127 0 18 chr17 13914826 13915102 -71523378 - AluSx SINE Alu 0 312 42 2454 74 0 0 chr17 13915905 13916201 -71522279 + AluY SINE Alu 1 296 -15 1937 121 0 0 chr17 13916292 13916557 -71521923 + AluSg SINE Alu 32 296 -14 24 77 0 0 chr17 13917949 13918001 -71520479 + AT_rich Low_complexity Low_complexity 1 52 0 182 125 0 50 chr17 13919665 13919705 -71518775 + (GAAAA)n Simple_repeat Simple_repeat 3 40 0 509 252 18 0 chr17 13921798 13921909 -71516571 + MER81 DNA DNA 1 113 -1 494 250 58 24 chr17 13922645 13922853 -71515627 - LTR33 LTR ERVL -2 519 305 2223 161 6 11 chr17 13923843 13924209 -71514271 - THE1B LTR MaLR 0 364 1 9290 122 36 31 chr17 13924209 13925698 -71512782 - THE1B-int LTR MaLR 0 1580 80 2524 88 48 119 chr17 13925698 13926176 -71512304 + MLT2A1 LTR ERVL 1 444 0 9290 122 36 31 chr17 13926176 13926257 -71512223 - THE1B-int LTR MaLR -1500 80 1 2535 119 6 3 chr17 13926257 13926618 -71511862 - THE1B LTR MaLR 0 364 3 599 345 72 48 chr17 13926680 13927155 -71511325 - HAL1 LINE L1 -906 1601 1116 614 287 169 35 chr17 13927415 13927812 -71510668 + LTR16A LTR ERVL 8 457 0 975 225 165 42 chr17 13928106 13928554 -71509926 - MLT1D LTR MaLR 0 505 3 2091 130 7 10 chr17 13928638 13928946 -71509534 - AluSx SINE Alu -5 307 1 3124 151 35 14 chr17 13930328 13930905 -71507575 + L1MA8 LINE L1 5698 6286 -5 1166 191 100 67 chr17 13931221 13931531 -71506949 + MER66A LTR ERV1 108 360 -118 4139 121 11 2 chr17 13931531 13932159 -71506321 + MER41B LTR ERV1 1 634 -1 1166 191 100 67 chr17 13932159 13932282 -71506198 + MER66A LTR ERV1 360 478 0 2201 130 3 0 chr17 13932366 13932673 -71505807 - AluSx SINE Alu -4 308 1 591 256 56 104 chr17 13932995 13933389 -71505091 + L2 LINE L2 2939 3313 0 21 71 0 0 chr17 13933529 13933571 -71504909 + AT_rich Low_complexity Low_complexity 1 42 0 1970 116 11 0 chr17 13933944 13934221 -71504259 + AluSx SINE Alu 1 280 -32 224 29 0 29 chr17 13934223 13934257 -71504223 + (TAAAA)n Simple_repeat Simple_repeat 2 34 0 25 0 0 0 chr17 13934257 13934282 -71504198 + AT_rich Low_complexity Low_complexity 1 25 0 2235 99 0 3 chr17 13934408 13934712 -71503768 - AluY SINE Alu -8 303 1 468 373 65 37 chr17 13937455 13937806 -71500674 - L2 LINE L2 -1 3271 2911 247 376 122 0 chr17 13937872 13938119 -71500361 - L2 LINE L2 -460 2854 2578 401 275 12 44 chr17 13938201 13938361 -71500119 + MIR SINE MIR 63 217 -45 1665 128 4 0 chr17 13938515 13938749 -71499731 - AluSx SINE Alu -25 287 53 2749 10 0 3 chr17 13938749 13939054 -71499426 + AluYa5 SINE Alu 1 305 -6 434 133 0 0 chr17 13939054 13939114 -71499366 - AluSx SINE Alu -250 60 1 269 240 125 48 chr17 13939673 13939777 -71498703 - MIR3 SINE MIR 0 208 97 225 276 66 0 chr17 13939984 13940060 -71498420 + MLT1H LTR MaLR 8 88 -461 3325 196 59 29 chr17 13940064 13940854 -71497626 - L1MB5 LINE L1 0 6174 5312 2330 50 40 20 chr17 13940854 13941154 -71497326 - AluY SINE Alu -5 306 1 3325 196 59 29 chr17 13941154 13941723 -71496757 - L1MB5 LINE L1 -862 5312 4761 253 289 96 24 chr17 13941759 13941925 -71496555 + MLT1H LTR MaLR 114 291 -258 440 385 27 11 chr17 13942281 13942468 -71496012 + MIR SINE MIR 39 228 -34 192 77 0 0 chr17 13942494 13942520 -71495960 + (TTG)n Simple_repeat Simple_repeat 2 27 0 475 87 87 3 chr17 13943166 13943478 -71495002 + (TA)n Simple_repeat Simple_repeat 1 338 0 486 102 72 0 chr17 13943492 13943659 -71494821 + (TA)n Simple_repeat Simple_repeat 1 179 0 333 162 37 7 chr17 13943694 13943830 -71494650 + (TA)n Simple_repeat Simple_repeat 1 140 0 2215 97 3 3 chr17 13943830 13944118 -71494362 - AluSc SINE Alu -21 288 1 1568 254 5 10 chr17 13944121 13944534 -71493946 + L1ME3A LINE L1 5582 5992 -174 1720 167 7 11 chr17 13944774 13945061 -71493419 - AluJo SINE Alu -22 290 5 189 350 52 10 chr17 13945182 13945279 -71493201 + L3 LINE CR1 1448 1548 -29 1960 145 7 0 chr17 13945279 13945568 -71492912 - AluJb SINE Alu -21 291 1 229 360 0 16 chr17 13946270 13946395 -71492085 + CT-rich Low_complexity Low_complexity 5 127 0 222 171 0 0 chr17 13947012 13947053 -71491427 + (CA)n Simple_repeat Simple_repeat 2 42 0 260 325 13 13 chr17 13947103 13947180 -71491300 - MIR SINE MIR -94 114 38 350 211 35 111 chr17 13947265 13947359 -71491121 + L1ME3A LINE L1 6009 6086 -84 1842 167 22 30 chr17 13947359 13947725 -71490755 - MLT1A1 LTR MaLR -2 363 1 350 211 35 111 chr17 13947725 13947801 -71490679 + L1ME3A LINE L1 6086 6166 -4 301 217 42 8 chr17 13947801 13947921 -71490559 + (TA)n Simple_repeat Simple_repeat 1 124 0 574 292 116 58 chr17 13948139 13948215 -71490265 + MLT1J LTR MaLR 1 71 -440 2562 47 0 0 chr17 13948215 13948513 -71489967 + AluY SINE Alu 1 298 -13 574 292 116 58 chr17 13948513 13948919 -71489561 + MLT1J LTR MaLR 71 511 0 487 350 48 21 chr17 13949294 13949480 -71489000 + MIR SINE MIR 15 205 -57 182 340 150 0 chr17 13950169 13950269 -71488211 - MIR SINE MIR -69 139 25 502 208 32 32 chr17 13950270 13950395 -71488085 - Tigger2 DNA MER2_type -38 2680 2556 2165 153 26 81 chr17 13951455 13951640 -71486840 + Tigger2a DNA MER2_type 1 195 -2513 2309 113 0 0 chr17 13951640 13951949 -71486531 - AluY SINE Alu -2 309 1 2165 153 26 81 chr17 13951949 13952222 -71486258 + Tigger2a DNA MER2_type 195 434 0 2254 200 77 35 chr17 13952514 13952584 -71485896 + L1MB5 LINE L1 5544 5610 -564 1940 161 0 0 chr17 13952584 13952875 -71485605 + AluSx SINE Alu 5 295 -17 2254 200 77 35 chr17 13952875 13953404 -71485076 + L1MB5 LINE L1 5610 6168 -6 244 309 24 63 chr17 13954501 13954627 -71483853 + L2 LINE L2 2926 3046 -226 571 186 68 114 chr17 13954732 13954952 -71483528 - MER58C DNA MER1_type 0 215 6 423 0 0 0 chr17 13955154 13955201 -71483279 + (CA)n Simple_repeat Simple_repeat 1 47 0 1013 109 32 4 chr17 13955337 13955584 -71482896 + CT-rich Low_complexity Low_complexity 1 254 0 237 369 0 0 chr17 13956502 13956586 -71481894 - MIR3 SINE MIR -35 173 90 224 341 33 11 chr17 13956870 13956961 -71481519 + MIR SINE MIR 22 114 -148 259 291 126 31 chr17 13956994 13957121 -71481359 + MIR SINE MIR 106 244 -18 227 235 86 25 chr17 13957616 13957697 -71480783 - MIR SINE MIR -54 208 123 14625 135 106 7 chr17 13958650 13961921 -71476559 + L1PBa LINE L1 5 3601 -3261 1646 213 50 2 chr17 13961921 13962358 -71476122 - L1 LINE L1 -1362 4784 4327 4799 247 61 43 chr17 13962367 13962520 -71475960 + L1MCa LINE L1 2062 2211 -4215 596 133 0 0 chr17 13962520 13962625 -71475855 + L1MA9 LINE L1 6207 6311 -1 4799 247 61 43 chr17 13962625 13962775 -71475705 + L1MCa LINE L1 2211 2357 -4069 2450 78 3 3 chr17 13962775 13963083 -71475397 + AluY SINE Alu 1 308 -3 4799 247 61 43 chr17 13963083 13965193 -71473287 + L1MCa LINE L1 2357 4580 -1846 1033 215 5 0 chr17 13965208 13965408 -71473072 + MER82 DNA MER2_type 2 202 -451 1340 239 152 18 chr17 13965720 13966114 -71472366 + MER82 DNA MER2_type 206 652 -1 1665 244 61 48 chr17 13966115 13966787 -71471693 + L1MCa LINE L1 4593 5273 -1153 588 296 78 50 chr17 13966894 13967292 -71471188 - MARNA DNA Mariner -29 557 149 246 322 222 0 chr17 13967340 13967511 -71470969 - MIR SINE MIR -19 243 35 816 203 70 0 chr17 13967885 13968043 -71470437 + MER82 DNA MER2_type 1 169 -484 1477 169 0 24 chr17 13968061 13968191 -71470289 + Tigger2a DNA MER2_type 2 134 -2574 2062 95 40 0 chr17 13968191 13968487 -71469993 - AluSp SINE Alu -5 308 1 1477 169 0 24 chr17 13968487 13968723 -71469757 + Tigger2a DNA MER2_type 134 434 0 1253 164 99 34 chr17 13968723 13968832 -71469648 + MER82 DNA MER2_type 199 299 -354 2563 47 3 0 chr17 13968832 13969133 -71469347 + AluY SINE Alu 3 304 -7 1253 164 99 34 chr17 13969133 13969192 -71469288 + MER82 DNA MER2_type 299 353 -300 1981 143 48 38 chr17 13969192 13969563 -71468917 + THE1C LTR MaLR 1 375 0 1253 164 99 34 chr17 13969563 13969654 -71468826 + MER82 DNA MER2_type 353 476 -177 183 80 0 0 chr17 13970417 13970442 -71468038 + (CA)n Simple_repeat Simple_repeat 2 26 0 316 293 100 41 chr17 13970581 13971291 -71467189 + L1MC/D LINE L1 2386 3137 -3009 23 86 0 0 chr17 13971303 13971361 -71467119 + AT_rich Low_complexity Low_complexity 1 58 0 1247 77 0 0 chr17 13971371 13971527 -71466953 - AluY SINE Alu -4 307 152 975 289 82 13 chr17 13971694 13972157 -71466323 + L1MC/D LINE L1 5264 5758 -2050 2429 65 0 0 chr17 13972212 13972504 -71465976 - AluSx SINE Alu -17 295 4 255 305 34 51 chr17 13973390 13973508 -71464972 + MIR SINE MIR 3 118 -144 2099 150 40 29 chr17 13973601 13973981 -71464499 + L1MA7 LINE L1 5902 6285 -6 2116 113 3 10 chr17 13974071 13974371 -71464109 + AluSx SINE Alu 1 298 -14 2413 78 0 7 chr17 13974932 13975240 -71463240 - AluY SINE Alu -5 306 1 2467 84 0 13 chr17 13975686 13975997 -71462483 + AluY SINE Alu 1 307 -4 1240 213 65 76 chr17 13976051 13976072 -71462408 - MLT2C2 LTR ERVL -9 455 435 180 0 0 0 chr17 13976072 13976092 -71462388 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 1240 213 65 76 chr17 13976092 13976530 -71461950 - MLT2C2 LTR ERVL -29 435 1 267 221 12 58 chr17 13977109 13977190 -71461290 - L2 LINE L2 -1061 2253 2177 310 376 67 18 chr17 13977190 13977355 -71461125 - MER5B DNA MER1_type 0 178 6 588 299 197 13 chr17 13977448 13977839 -71460641 - L2 LINE L2 -1292 2022 1560 2241 118 0 3 chr17 13977855 13978161 -71460319 + AluSg SINE Alu 1 305 -5 2398 72 0 3 chr17 13978325 13978616 -71459864 + AluSg1 SINE Alu 1 290 -19 2529 240 20 30 chr17 13978791 13979350 -71459130 - MLT2B3 LTR ERVL 0 554 2 22 88 0 0 chr17 13979471 13979528 -71458952 + AT_rich Low_complexity Low_complexity 1 57 0 23 0 0 0 chr17 13979576 13979599 -71458881 + AT_rich Low_complexity Low_complexity 1 23 0 315 355 149 12 chr17 13980107 13980607 -71457873 + L2 LINE L2 2688 3266 -47 1348 208 10 31 chr17 13980812 13981105 -71457375 - AluJo SINE Alu -25 287 1 1093 171 0 18 chr17 13981242 13981412 -71457068 + FAM SINE Alu 1 167 -8 2276 115 0 10 chr17 13981526 13981840 -71456640 - AluY SINE Alu 0 311 1 363 164 0 16 chr17 13982777 13982838 -71455642 + AluJ/FRAM SINE Alu 233 292 -10 194 366 183 0 chr17 13982978 13983071 -71455409 - L2 LINE L2 -2 3270 3161 744 333 50 36 chr17 13983159 13983600 -71454880 - L2 LINE L2 -4 3309 2863 1346 178 99 14 chr17 13983616 13983909 -71454571 - MLT1C LTR MaLR -5 462 145 979 353 73 24 chr17 13983918 13984578 -71453902 - L2 LINE L2 -501 2813 2122 1213 151 31 62 chr17 13984820 13985045 -71453435 - MER20 DNA MER1_type -1 218 1 239 167 198 4 chr17 13986176 13986262 -71452218 - MLT1G1 LTR MaLR 0 590 501 787 356 17 34 chr17 13986302 13986653 -71451827 - MLT1G1 LTR MaLR -175 420 76 5566 58 8 0 chr17 13987012 13987667 -71450813 - L1PA8 LINE L1 -2 6170 5511 2415 69 7 0 chr17 13988633 13988922 -71449558 - AluSc SINE Alu -17 292 2 2168 196 21 128 chr17 13989257 13989921 -71448559 + MLT1E LTR MaLR 1 593 0 2277 112 3 0 chr17 13990088 13990383 -71448097 + AluSp SINE Alu 1 296 -17 196 367 40 7 chr17 13990628 13990778 -71447702 - MIR3 SINE MIR 0 208 54 223 324 98 0 chr17 13990786 13990888 -71447592 - MIR SINE MIR -11 251 140 2168 112 0 0 chr17 13991215 13991501 -71446979 - AluSg SINE Alu -12 298 13 658 173 54 54 chr17 13991620 13991788 -71446692 - MLT1H LTR MaLR 0 549 382 1674 277 9 18 chr17 13991815 13992262 -71446218 + MLT1E2 LTR MaLR 1 443 -183 1871 200 50 74 chr17 13992412 13992497 -71445983 + MLT1D LTR MaLR 3 88 -417 2337 107 0 0 chr17 13992497 13992796 -71445684 + AluSc SINE Alu 1 299 -10 1871 200 50 74 chr17 13992796 13993225 -71445255 + MLT1D LTR MaLR 88 505 0 491 188 80 36 chr17 13993425 13993563 -71444917 - MLT1H LTR MaLR -394 155 12 286 282 106 12 chr17 13993978 13994063 -71444417 - MIR SINE MIR -67 141 49 731 298 113 73 chr17 13994137 13994327 -71444153 + MLT1L LTR MaLR 8 189 -426 2366 164 55 26 chr17 13994327 13994749 -71443731 + Tigger2a DNA MER2_type 1 434 0 731 298 113 73 chr17 13994749 13994770 -71443710 + MLT1L LTR MaLR 189 208 -407 707 280 54 0 chr17 13994770 13994938 -71443542 + MER45A DNA AcHobo 1 177 -1 731 298 113 73 chr17 13994938 13995276 -71443204 + MLT1L LTR MaLR 208 580 -35 254 324 83 0 chr17 13995311 13995419 -71443061 + MIR SINE MIR 75 191 -71 2626 139 21 32 chr17 13995437 13995870 -71442610 - MSTA LTR MaLR 0 428 1 2626 217 107 49 chr17 13996315 13996509 -71441971 + L1MDa LINE L1 18 199 -6341 2270 81 35 0 chr17 13996509 13996793 -71441687 - AluSc SINE Alu -15 294 1 2626 217 107 49 chr17 13996793 13997388 -71441092 + L1MDa LINE L1 199 758 -5782 2072 102 0 68 chr17 13997388 13997711 -71440769 + AluSc SINE Alu 1 301 -8 2626 217 107 49 chr17 13997711 13998232 -71440248 + L1MDa LINE L1 758 1561 -4979 2328 81 0 3 chr17 13998237 13998534 -71439946 + AluY SINE Alu 1 296 -15 275 256 116 0 chr17 13998598 13998684 -71439796 + MER5A DNA MER1_type 7 102 -87 907 147 0 0 chr17 13998710 13998839 -71439641 + FLAM_C SINE Alu 1 129 -4 198 0 0 0 chr17 14000163 14000185 -71438295 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 2190 67 0 0 chr17 14000527 14000794 -71437686 + AluY SINE Alu 39 305 -6 377 339 73 17 chr17 14000907 14001084 -71437396 + L2 LINE L2 2857 3043 -229 2107 84 84 0 chr17 14001151 14001435 -71437045 + AluSp SINE Alu 1 308 -5 357 276 0 13 chr17 14001608 14001684 -71436796 + L2 LINE L2 3196 3270 -2 1837 133 37 4 chr17 14001693 14001964 -71436516 + AluSx SINE Alu 1 280 -32 470 247 100 27 chr17 14002667 14002817 -71435663 + MIR SINE MIR 81 241 -21 198 214 0 114 chr17 14002831 14002901 -71435579 - L2 LINE L2 -5 3267 3206 772 286 78 27 chr17 14003165 14003535 -71434945 - L2 LINE L2 -542 2772 2384 496 286 71 16 chr17 14004800 14004982 -71433498 + MIR3 SINE MIR 3 194 -14 814 307 73 16 chr17 14006666 14007050 -71431430 - L1ME3A LINE L1 -1239 4907 4502 1219 256 86 66 chr17 14007058 14008243 -71430237 + L1ME3A LINE L1 4929 6162 -2 2708 199 12 4 chr17 14008329 14008841 -71429639 + MER34 LTR ERV1 27 542 0 1510 178 42 11 chr17 14010029 14010316 -71428164 - L1MC1 LINE L1 0 6333 6038 21 36 0 0 chr17 14010328 14010356 -71428124 + AT_rich Low_complexity Low_complexity 1 28 0 551 286 98 54 chr17 14010640 14010955 -71427525 + MLT1I LTR MaLR 81 409 0 405 244 38 38 chr17 14010990 14011121 -71427359 - L1 LINE L1 -1530 4616 4486 307 304 47 52 chr17 14011221 14011412 -71427068 - L1 LINE L1 -1845 4301 4112 695 241 14 0 chr17 14011449 14011594 -71426886 - MER58B DNA MER1_type 0 341 195 2250 113 0 7 chr17 14011892 14012201 -71426279 - AluSx SINE Alu -5 307 1 823 280 92 48 chr17 14012225 14012618 -71425862 - L2 LINE L2 -5 3308 2899 2270 204 105 11 chr17 14012687 14013119 -71425361 + MLT2B1 LTR ERVL 1 483 -37 255 61 0 0 chr17 14013119 14013152 -71425328 + (CA)n Simple_repeat Simple_repeat 2 34 0 2270 204 105 11 chr17 14013152 14013194 -71425286 + MLT2B1 LTR ERVL 483 520 0 1206 227 64 72 chr17 14013691 14014232 -71424248 - MER39 LTR ERV1 0 707 8 612 238 176 33 chr17 14014455 14014757 -71423723 + L2 LINE L2 2930 3274 -39 281 257 110 9 chr17 14014750 14014859 -71423621 + L2 LINE L2 3150 3269 -3 * 35212 72 14 10 chr17 14014941 14021042 -71417438 + L1PA5 LINE L1 11 6145 -9 531 178 11 0 chr17 14021042 14021132 -71417348 - MER58B DNA MER1_type -250 91 1 243 147 59 29 chr17 14021132 14021200 -71417280 - L1MEc LINE L1 -4121 2275 2206 37 0 0 0 chr17 14021200 14021237 -71417243 + AT_rich Low_complexity Low_complexity 1 37 0 334 314 46 27 chr17 14021468 14021789 -71416691 - L1MDa LINE L1 -3769 2771 2483 1518 195 51 43 chr17 14021800 14022170 -71416310 - MLT1A2 LTR MaLR -1 373 1 404 179 179 19 chr17 14022580 14022686 -71415794 - MER63 DNA MER1_type -313 749 1 207 100 0 0 chr17 14022708 14022738 -71415742 + (GGAGA)n Simple_repeat Simple_repeat 4 33 0 194 377 0 0 chr17 14023538 14023615 -71414865 - L2 LINE L2 -553 2761 2685 601 270 48 59 chr17 14025298 14025388 -71413092 + LTR16A LTR ERVL 88 177 -273 812 201 32 37 chr17 14025388 14025577 -71412903 - MER53 DNA DNA -1 188 1 601 270 48 59 chr17 14025577 14025756 -71412724 + LTR16A LTR ERVL 177 354 -96 786 292 135 24 chr17 14026004 14026559 -71411921 + L1ME4a LINE L1 5323 5947 -174 21 0 0 0 chr17 14026565 14026586 -71411894 + AT_rich Low_complexity Low_complexity 1 21 0 714 267 11 6 chr17 14027282 14027458 -71411022 - MER5B DNA MER1_type -1 177 1 500 269 50 31 chr17 14028100 14028288 -71410192 + MIR SINE MIR 16 204 -58 26 0 0 0 chr17 14028288 14028314 -71410166 + AT_rich Low_complexity Low_complexity 1 26 0 614 91 45 23 chr17 14028314 14028490 -71409990 + (TA)n Simple_repeat Simple_repeat 1 180 0 584 262 63 74 chr17 14029297 14029648 -71408832 + L2 LINE L2 1577 1923 -1391 1362 287 137 33 chr17 14029992 14030468 -71408012 - Zaphod DNA AcHobo -3370 661 236 2094 49 38 4 chr17 14030468 14030731 -71407749 - AluY SINE Alu -1 310 39 1362 287 137 33 chr17 14030731 14030794 -71407686 - Zaphod DNA AcHobo -3795 236 181 604 208 286 28 chr17 14030794 14030972 -71407508 - MER58A DNA MER1_type 0 224 1 1362 287 137 33 chr17 14030972 14031030 -71407450 - Zaphod DNA AcHobo -3850 181 1 462 354 52 31 chr17 14031056 14031347 -71407133 + L2 LINE L2 2510 2806 -508 300 278 67 67 chr17 14031790 14031954 -71406526 + L3 LINE CR1 1214 1380 -197 1981 132 0 10 chr17 14031954 14032249 -71406231 + AluSc SINE Alu 1 292 -17 300 278 67 67 chr17 14032249 14032293 -71406187 + L3 LINE CR1 1379 1422 -155 1048 200 69 103 chr17 14032534 14032668 -71405812 + MLT1C LTR MaLR 1 138 -329 2000 115 11 0 chr17 14032668 14032947 -71405533 + AluSx SINE Alu 21 302 -10 1048 200 69 103 chr17 14032947 14033172 -71405308 + MLT1C LTR MaLR 138 348 -119 2142 166 23 43 chr17 14033178 14033576 -71404904 + MLT1B LTR MaLR 1 390 0 688 319 11 7 chr17 14033641 14033911 -71404569 - L1ME3A LINE L1 -208 5962 5692 246 363 35 18 chr17 14034115 14034228 -71404252 - L2 LINE L2 -11 3261 3147 180 331 66 37 chr17 14034630 14034766 -71403714 + L3 LINE CR1 1413 1552 -25 2186 92 0 60 chr17 14035337 14035653 -71402827 - AluSg SINE Alu -13 297 1 294 319 14 35 chr17 14035883 14036027 -71402453 + MIR SINE MIR 4 144 -118 332 316 53 9 chr17 14036191 14036305 -71402175 + MER5A DNA MER1_type 63 181 -8 366 264 70 87 chr17 14037954 14038196 -71400284 + MLT1L LTR MaLR 157 394 -221 532 279 0 7 chr17 14038241 14038381 -71400099 + MLT1L LTR MaLR 477 615 0 2420 80 0 0 chr17 14038585 14038884 -71399596 + AluSc SINE Alu 1 299 -10 367 247 11 3 chr17 14039290 14039383 -71399097 + MER5A DNA MER1_type 3 109 -80 455 129 71 0 chr17 14039759 14039844 -71398636 + AluY SINE Alu 218 308 -3 12067 161 15 28 chr17 14039844 14040288 -71398192 + L1P LINE L1 2591 3039 -3107 2229 100 0 0 chr17 14040288 14040609 -71397871 - AluSc SINE Alu 0 321 1 12067 161 15 28 chr17 14040609 14042419 -71396061 + L1P LINE L1 3039 4818 -1328 887 272 45 47 chr17 14042522 14042992 -71395488 + HAL1b LINE L1 74 542 -806 186 71 0 0 chr17 14043306 14043334 -71395146 + (CA)n Simple_repeat Simple_repeat 1 28 0 2325 93 7 3 chr17 14043511 14043812 -71394668 - AluSc SINE Alu -7 302 1 921 206 51 55 chr17 14044399 14044430 -71394050 + MIR SINE MIR 8 38 -224 2555 65 0 0 chr17 14044430 14044738 -71393742 + AluY SINE Alu 4 311 0 921 206 51 55 chr17 14044738 14044959 -71393521 + MIR SINE MIR 38 259 -3 345 333 15 15 chr17 14047960 14048095 -71390385 + MER5A DNA MER1_type 27 161 -28 186 43 0 0 chr17 14048775 14048798 -71389682 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1431 161 83 12 chr17 14048803 14048940 -71389540 - AluJb SINE Alu -40 272 146 264 59 0 0 chr17 14048940 14048974 -71389506 + (TTTTA)n Simple_repeat Simple_repeat 1 34 0 1431 161 83 12 chr17 14048974 14049090 -71389390 - AluJb SINE Alu -166 146 1 1268 193 55 29 chr17 14049368 14049643 -71388837 - AluJo SINE Alu -30 282 1 2096 208 28 63 chr17 14050190 14050880 -71387600 + L1MC/D LINE L1 5146 5818 -743 1831 263 10 14 chr17 14050875 14051380 -71387100 + L1ME1 LINE L1 22 524 -5872 * 1131 203 35 61 chr17 14051377 14051752 -71386728 - L1MEc LINE L1 -4126 2270 1906 * 710 202 86 34 chr17 14051749 14052016 -71386464 - L1M4 LINE L1 -1556 4590 4310 * 254 203 29 29 chr17 14052015 14052084 -71386396 - L1M4 LINE L1 -1556 4590 4522 * 1085 263 48 0 chr17 14052083 14052395 -71386085 - L1MEc LINE L1 -4492 1904 1578 4577 227 66 28 chr17 14052404 14054586 -71383894 + L1ME1 LINE L1 3968 6230 -5 684 249 27 27 chr17 14054598 14054823 -71383657 + L1ME1 LINE L1 5813 6037 -129 694 262 110 4 chr17 14054849 14055086 -71383394 + L1MC/D LINE L1 5555 5816 -1992 1114 215 72 54 chr17 14055235 14055570 -71382910 + MER2 DNA MER2_type 2 342 -2 333 47 0 0 chr17 14056515 14056558 -71381922 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 2204 83 0 4 chr17 14056563 14056839 -71381641 - AluSc SINE Alu -34 275 1 235 319 43 69 chr17 14057028 14057144 -71381336 + L2 LINE L2 3138 3250 -22 1326 213 211 38 chr17 14057453 14057899 -71380581 + L1ME3A LINE L1 5422 5789 -381 1832 164 0 3 chr17 14057899 14058186 -71380294 + AluJo SINE Alu 7 292 -20 1326 213 211 38 chr17 14058186 14058356 -71380124 + L1ME3A LINE L1 5789 6169 -1 336 278 165 0 chr17 14058657 14058790 -71379690 + MER5A DNA MER1_type 1 155 -34 2676 187 10 55 chr17 14058791 14059373 -71379107 + MER74A LTR ERVL 3 558 0 2212 123 0 0 chr17 14059377 14059677 -71378803 + AluSg SINE Alu 1 300 -10 1795 167 0 14 chr17 14060148 14060442 -71378038 + AluJo SINE Alu 1 290 -22 2202 116 3 7 chr17 14060837 14061138 -71377342 + AluSx SINE Alu 1 300 -12 2180 132 3 0 chr17 14061272 14061582 -71376898 + AluSx SINE Alu 1 311 -1 229 341 154 10 chr17 14061592 14061800 -71376680 - MIR SINE MIR -12 250 13 1327 212 72 80 chr17 14062057 14062447 -71376033 + LTR26E LTR ERV1 1 456 -166 2430 76 7 0 chr17 14062447 14062751 -71375729 + AluSc SINE Alu 1 306 -3 1327 212 72 80 chr17 14062751 14062917 -71375563 + LTR26E LTR ERV1 456 622 0 261 172 52 0 chr17 14063711 14063769 -71374711 + L2 LINE L2 2995 3055 -217 1667 93 0 0 chr17 14063788 14064002 -71374478 - AluSc SINE Alu -5 304 91 2254 107 0 38 chr17 14064737 14065056 -71373424 - AluSx SINE Alu -5 307 1 413 273 27 27 chr17 14065787 14065937 -71372543 + MER103 DNA DNA 2 151 -15 2295 90 0 0 chr17 14066100 14066414 -71372066 + AluY SINE Alu 1 311 0 244 250 25 150 chr17 14066462 14066622 -71371858 + MIR SINE MIR 28 167 -95 655 303 48 20 chr17 14066633 14066884 -71371596 - MIR SINE MIR 0 262 5 577 276 126 20 chr17 14066888 14067087 -71371393 - L2 LINE L2 0 3313 3094 1899 215 11 23 chr17 14067472 14068051 -71370429 + L1MB8 LINE L1 5092 5666 -518 1648 190 13 10 chr17 14068051 14068362 -71370118 + AluJo SINE Alu 1 312 0 21 36 0 0 chr17 14068374 14068402 -71370078 + AT_rich Low_complexity Low_complexity 1 28 0 2366 125 15 7 chr17 14068448 14068464 -71370016 + THE1A LTR MaLR 1 15 -340 2419 107 56 3 chr17 14068464 14068801 -71369679 + THE1A LTR MaLR 1 355 0 11938 102 23 0 chr17 14068801 14070345 -71368135 + THE1A-int LTR MaLR 1 1580 0 2366 125 15 7 chr17 14070345 14070690 -71367790 + THE1A LTR MaLR 14 348 -7 1560 181 0 21 chr17 14070690 14070972 -71367508 + AluJo SINE Alu 26 301 -11 673 179 65 16 chr17 14070988 14071111 -71367369 + FLAM_C SINE Alu 2 130 -13 1882 194 71 26 chr17 14071112 14071565 -71366915 + L1MB8 LINE L1 5669 6141 -37 3888 129 14 21 chr17 14071565 14072061 -71366419 + MER39B LTR ERV1 1 494 -159 2334 79 0 13 chr17 14072061 14072365 -71366115 + AluY SINE Alu 1 300 -11 3888 129 14 21 chr17 14072365 14072490 -71365990 + MER39B LTR ERV1 494 618 -35 2631 111 19 11 chr17 14072499 14072859 -71365621 + THE1B LTR MaLR 1 363 -1 264 65 0 43 chr17 14072859 14072896 -71365584 + L1MB8 LINE L1 6142 6178 0 679 78 0 0 chr17 14072958 14073048 -71365432 + L1MA8 LINE L1 6002 6091 -200 3162 106 38 100 chr17 14073048 14073374 -71365106 + MER4B LTR ERV1 1 273 -337 2347 76 7 0 chr17 14073374 14073662 -71364818 - AluSq SINE Alu -23 290 1 3162 106 38 100 chr17 14073662 14073947 -71364533 + MER4B LTR ERV1 273 574 -36 1093 135 26 0 chr17 14073971 14074164 -71364316 + L1MA8 LINE L1 6082 6279 -12 1956 170 63 35 chr17 14074171 14074600 -71363880 + LTR56 LTR ERV1 5 445 0 1885 168 128 97 chr17 14074630 14075206 -71363274 + LTR49 LTR ERV1 2 595 0 301 253 13 0 chr17 14075208 14075283 -71363197 + L1ME LINE L1 5473 5548 -618 304 238 67 9 chr17 14075290 14075395 -71363085 - MER113 DNA MER1_type? -405 116 6 273 249 65 77 chr17 14075526 14075695 -71362785 - MIR SINE MIR 0 262 96 2526 62 0 10 chr17 14076110 14076416 -71362064 - AluY SINE Alu -8 303 1 1895 201 62 28 chr17 14076451 14076888 -71361592 + LTR2B LTR ERV1 32 483 -7 378 61 0 0 chr17 14077592 14077641 -71360839 + (CA)n Simple_repeat Simple_repeat 2 50 0 205 316 176 0 chr17 14077999 14078135 -71360345 - MIR SINE MIR -31 231 72 615 280 57 0 chr17 14078144 14078301 -71360179 - MER63A DNA MER1_type -29 181 16 4358 146 15 14 chr17 14078318 14078601 -71359879 + MER50 LTR ERV1 1 282 -452 2180 139 124 21 chr17 14078601 14078989 -71359491 + MSTA LTR MaLR 1 428 0 4358 146 15 14 chr17 14078989 14079426 -71359054 + MER50 LTR ERV1 282 722 -12 482 191 22 52 chr17 14079642 14079778 -71358702 + MER113 DNA MER1_type? 14 145 -376 3468 173 17 3 chr17 14079892 14080481 -71357999 - LTR59 LTR ERV1 0 597 1 2854 202 42 78 chr17 14080485 14081272 -71357208 - LTR59-int LTR ERV1 -5 6753 5995 4446 170 21 33 chr17 14081273 14082067 -71356413 + LTR1 LTR ERV1 1 785 0 1582 202 56 24 chr17 14082067 14082558 -71355922 + HUERS-P2 LTR ERV1 1 572 -2516 25710 164 15 15 chr17 14082596 14087719 -71350761 + HUERS-P2 LTR ERV1 540 5869 -425 467 203 0 0 chr17 14087718 14087815 -71350665 - LTR49-int LTR ERV1 -3222 2724 851 * 1926 99 65 41 chr17 14087822 14088008 -71350472 - AluSx SINE Alu -12 300 103 2053 174 50 21 chr17 14088008 14088445 -71350035 - LTR7 LTR ERV1 0 450 1 1926 99 65 41 chr17 14088445 14088551 -71349929 - AluSx SINE Alu -209 103 1 1737 207 75 44 chr17 14088553 14089070 -71349410 - LTR49-int LTR ERV1 -4050 2281 1670 394 170 10 10 chr17 14089087 14089187 -71349293 + (TA)n Simple_repeat Simple_repeat 1 100 0 1624 168 73 75 chr17 14089198 14089762 -71348718 - LTR49-int LTR ERV1 -4681 1650 886 203 399 101 0 chr17 14089864 14090012 -71348468 - L3 LINE CR1 -1193 384 222 321 26 0 0 chr17 14090085 14090123 -71348357 + (CA)n Simple_repeat Simple_repeat 2 39 0 243 232 85 37 chr17 14090185 14090267 -71348213 - MIR SINE MIR -69 193 108 889 264 109 81 chr17 14090473 14091067 -71347413 + MLT1L LTR MaLR 1 611 -4 1068 176 11 5 chr17 14091270 14091457 -71347023 + MER5A DNA MER1_type 1 188 -1 201 235 123 25 chr17 14092419 14092500 -71345980 + MIR SINE MIR 118 206 -56 2220 116 0 7 chr17 14092658 14092961 -71345519 - AluSq SINE Alu -12 301 1 258 279 74 74 chr17 14093173 14093417 -71345063 - L2 LINE L2 -212 3060 2817 1661 263 63 30 chr17 14095314 14096082 -71342398 + L1MDb LINE L1 775 1538 -4868 2172 112 3 23 chr17 14096082 14096386 -71342094 + AluSx SINE Alu 1 298 -14 1661 263 63 30 chr17 14096386 14096477 -71342003 + L1MDb LINE L1 1538 1624 -4782 1433 202 52 14 chr17 14096530 14096843 -71341637 + AluJo SINE Alu 13 312 0 2625 255 102 22 chr17 14097189 14098168 -71340312 + L1MDb LINE L1 1733 2632 -3774 4700 149 34 18 chr17 14098168 14098940 -71339540 + LTR1 LTR ERV1 2 785 0 2625 255 102 22 chr17 14098940 14099684 -71338796 + L1MDb LINE L1 2632 3591 -2815 988 300 72 22 chr17 14099808 14100208 -71338272 - MLT1J LTR MaLR -91 420 1 888 201 66 105 chr17 14100635 14101058 -71337422 - MER66A LTR ERV1 -143 435 97 287 230 11 11 chr17 14101058 14101145 -71337335 + L2 LINE L2 2473 2559 -755 1224 181 31 44 chr17 14101235 14101462 -71337018 - MER58A DNA MER1_type 0 224 1 448 336 47 44 chr17 14102025 14102299 -71336181 + Charlie8 DNA MER1_type 2 276 -2141 264 119 24 0 chr17 14102469 14102511 -71335969 + Charlie8 DNA MER1_type 1376 1418 -999 252 373 63 16 chr17 14102522 14102648 -71335832 + MIR SINE MIR 16 147 -61 2125 182 3 42 chr17 14104211 14104591 -71333889 + MLT1A1 LTR MaLR 1 365 0 342 309 117 40 chr17 14105044 14105267 -71333213 + MIR SINE MIR 23 262 0 315 267 100 87 chr17 14105313 14105429 -71333051 + MER5B DNA MER1_type 2 122 -56 378 61 0 0 chr17 14105429 14105478 -71333002 + (TG)n Simple_repeat Simple_repeat 2 50 0 315 267 100 87 chr17 14105478 14105511 -71332969 + MER5B DNA MER1_type 122 153 -25 386 339 51 57 chr17 14106171 14106284 -71332196 - MER5B DNA MER1_type -2 176 63 2284 104 0 0 chr17 14106284 14106581 -71331899 - AluSg SINE Alu -13 297 1 386 339 51 57 chr17 14106581 14106644 -71331836 - MER5B DNA MER1_type -115 63 1 374 206 32 2 chr17 14106771 14106919 -71331561 - MER53 DNA DNA 0 189 5 740 317 39 12 chr17 14107034 14107378 -71331102 + MLT1K LTR MaLR 59 439 -149 1632 168 104 43 chr17 14107388 14107561 -71330919 + L1 LINE L1 4920 5081 -1065 1988 152 3 22 chr17 14107561 14107876 -71330604 - AluSx SINE Alu -3 309 1 1632 168 104 43 chr17 14107876 14108078 -71330402 + L1 LINE L1 5081 5318 -828 430 223 58 43 chr17 14108078 14108217 -71330263 + MLT1K LTR MaLR 448 588 0 220 297 125 0 chr17 14108471 14108535 -71329945 + L2 LINE L2 3196 3267 -5 231 307 179 21 chr17 14110096 14110236 -71328244 - L3 LINE CR1 -1 1576 1415 832 224 33 0 chr17 14110260 14110412 -71328068 + FRAM SINE Alu 1 156 -20 406 298 63 58 chr17 14110437 14110642 -71327838 - L3 LINE CR1 -178 1399 1194 2038 82 14 25 chr17 14110921 14111202 -71327278 + AluSx SINE Alu 1 278 -34 317 215 49 0 chr17 14112602 14112746 -71325734 + (TA)n Simple_repeat Simple_repeat 2 152 0 22 0 0 0 chr17 14112768 14112790 -71325690 + AT_rich Low_complexity Low_complexity 1 22 0 198 277 0 46 chr17 14112889 14112954 -71325526 + L2 LINE L2 3244 3305 -8 207 100 0 100 chr17 14113937 14113987 -71324493 + L2 LINE L2 3269 3313 0 234 243 7 143 chr17 14113990 14114130 -71324350 + L3 LINE CR1 1146 1266 -311 573 250 51 6 chr17 14114130 14114306 -71324174 + MER96B DNA MER1_type? 232 415 -2 3018 85 0 5 chr17 14114612 14114999 -71323481 + MLT2A1 LTR ERVL 1 385 -59 974 130 16 120 chr17 14115009 14115254 -71323226 + MLT1B LTR MaLR 177 388 -2 2061 134 3 7 chr17 14115862 14116169 -71322311 + AluSg SINE Alu 1 306 -4 516 291 32 13 chr17 14117281 14117439 -71321041 + MIR SINE MIR 5 165 -97 218 350 97 0 chr17 14117546 14117649 -71320831 + MIR SINE MIR 34 146 -116 320 252 246 29 chr17 14118463 14118804 -71319676 - L1ME4a LINE L1 0 6121 5707 316 312 58 33 chr17 14118946 14119266 -71319214 - L1ME4a LINE L1 -681 5440 5255 949 295 44 33 chr17 14119546 14120084 -71318396 - L1MC4a LINE L1 -297 5824 5441 212 271 71 0 chr17 14120290 14120375 -71318105 - MER5C DNA MER1_type -1 323 233 322 233 47 0 chr17 14120401 14120487 -71317993 - MER5C DNA MER1_type -200 124 35 2118 113 17 7 chr17 14121041 14121333 -71317147 + AluSx SINE Alu 3 297 -15 701 105 0 76 chr17 14121341 14121446 -71317034 + (GGAA)n Simple_repeat Simple_repeat 3 93 -67 2095 125 0 0 chr17 14121446 14121897 -71316583 + AluSg SINE Alu 1 451 0 701 105 0 76 chr17 14121897 14121961 -71316519 + (GGAA)n Simple_repeat Simple_repeat 93 160 0 334 362 14 50 chr17 14122707 14122852 -71315628 + HAL1 LINE L1 386 522 -1985 1056 224 23 0 chr17 14122852 14123071 -71315409 - MER58A DNA MER1_type 0 224 1 334 362 14 50 chr17 14123071 14123143 -71315337 + HAL1 LINE L1 522 595 -1912 392 297 34 71 chr17 14123302 14123625 -71314855 - L1 LINE L1 -2679 3467 3157 291 304 156 56 chr17 14123642 14124053 -71314427 - L2 LINE L2 -1071 2243 1792 261 242 58 58 chr17 14124764 14124884 -71313596 - LTR28 LTR ERV1 -1 1019 900 526 260 109 71 chr17 14124980 14125419 -71313061 - LTR1B LTR ERV1 -328 498 43 2925 177 35 3 chr17 14125442 14126012 -71312468 - HUERS-P2 LTR ERV1 0 3088 2467 * 3588 213 25 25 chr17 14126011 14126777 -71311703 - HUERS-P2 LTR ERV1 -1707 1381 616 516 194 14 76 chr17 14126748 14126892 -71311588 - HUERS-P2 LTR ERV1 -2952 136 2 * 866 237 120 60 chr17 14127098 14127552 -71310928 - LTR1B LTR ERV1 -38 1240 39 225 131 49 0 chr17 14127771 14127832 -71310648 + L1MCa LINE L1 2005 2068 -4358 403 244 0 21 chr17 14128909 14129010 -71309470 + MER51-int LTR ERV1 154 271 -4640 2335 110 49 9 chr17 14129471 14130002 -71308478 + MER51A LTR ERV1 2 625 -9 1316 149 39 71 chr17 14130036 14130317 -71308163 + MER51A-int LTR ERV1 1 272 -7544 1272 206 24 65 chr17 14130330 14130670 -71307810 + MER51A-int LTR ERV1 247 572 -7244 440 210 0 65 chr17 14130687 14130811 -71307669 + MER51-int LTR ERV1 2472 2587 -2428 341 234 16 62 chr17 14130881 14131009 -71307471 + MER51-int LTR ERV1 693 814 -7002 503 261 39 65 chr17 14131085 14131388 -71307092 + MER51-int LTR ERV1 1434 1630 -5046 313 309 65 0 chr17 14131667 14131790 -71306690 + MER51-int LTR ERV1 1900 2030 -1058 524 341 8 11 chr17 14132007 14132274 -71306206 + MER51-int LTR ERV1 2342 2607 -4069 959 128 63 11 chr17 14132417 14132596 -71305884 + MER51A LTR ERV1 143 426 -208 627 87 76 0 chr17 14133154 14133246 -71305234 - AluSg/x SINE Alu -46 266 168 2412 167 31 31 chr17 14133246 14133694 -71304786 + MER70A LTR ERVL 25 472 0 846 219 17 6 chr17 14133985 14134163 -71304317 - MLT2B3 LTR ERVL -374 180 1 290 276 0 26 chr17 14134209 14134285 -71304195 - L2 LINE L2 -1 3312 3239 23 54 0 0 chr17 14134309 14134346 -71304134 + AT_rich Low_complexity Low_complexity 1 37 0 1915 191 82 32 chr17 14134390 14134851 -71303629 - LTR2B LTR ERV1 0 490 7 1059 142 26 21 chr17 14134851 14135041 -71303439 - L1MA7 LINE L1 -44 6247 6057 241 281 26 98 chr17 14135387 14135540 -71302940 + MER5A DNA MER1_type 35 176 -13 2466 33 40 10 chr17 14135983 14136285 -71302195 + AluY SINE Alu 1 311 0 340 309 53 20 chr17 14137222 14137374 -71301106 - MARNA DNA Mariner -350 236 80 1387 159 5 9 chr17 14137953 14138173 -71300307 + MSTB LTR MaLR 1 219 -207 330 245 75 123 chr17 14138684 14138788 -71299692 + L1ME1 LINE L1 5955 6062 -104 1794 158 34 14 chr17 14138788 14139080 -71299400 + AluJb SINE Alu 1 298 -14 2342 68 0 0 chr17 14139083 14139378 -71299102 + L1PA5 LINE L1 5856 6150 -4 330 245 75 123 chr17 14139378 14139481 -71298999 + L1ME1 LINE L1 6064 6156 -10 245 172 47 16 chr17 14139735 14139799 -71298681 - MER103 DNA DNA -9 157 92 22 0 0 0 chr17 14139884 14139906 -71298574 + AT_rich Low_complexity Low_complexity 1 22 0 189 74 0 0 chr17 14139916 14139943 -71298537 + (CA)n Simple_repeat Simple_repeat 2 28 0 804 211 89 117 chr17 14139948 14140317 -71298163 - MLT2D LTR ERVL -50 364 6 397 193 24 12 chr17 14140328 14140411 -71298069 - MER33 DNA MER1_type -230 94 11 464 193 0 0 chr17 14140420 14140508 -71297972 - MER103 DNA DNA -69 97 10 207 171 49 0 chr17 14140530 14140571 -71297909 + (ATTG)n Simple_repeat Simple_repeat 2 44 0 668 260 35 40 chr17 14140664 14140864 -71297616 + Charlie8 DNA MER1_type 39 237 -2180 262 325 8 43 chr17 14141022 14141139 -71297341 - MIR SINE MIR -56 152 40 387 0 0 0 chr17 14141717 14141760 -71296720 + (TG)n Simple_repeat Simple_repeat 1 43 0 180 0 0 0 chr17 14144173 14144193 -71294287 + (A)n Simple_repeat Simple_repeat 1 20 0 1135 207 43 57 chr17 14146564 14146606 -71291874 - MER58B DNA MER1_type -2079 341 300 2301 109 0 0 chr17 14146606 14146908 -71291572 - AluSx SINE Alu -10 302 1 1135 207 43 57 chr17 14146908 14147165 -71291315 - MER58B DNA MER1_type -2120 300 46 265 250 12 0 chr17 14147282 14147362 -71291118 + (TGAA)n Simple_repeat Simple_repeat 4 84 0 349 304 71 36 chr17 14147485 14147653 -71290827 - L2 LINE L2 0 3313 3140 1392 159 0 21 chr17 14147732 14147965 -71290515 + AluJb SINE Alu 73 300 -12 1170 220 75 12 chr17 14148124 14148447 -71290033 + MLT1A1 LTR MaLR 9 365 0 453 260 86 40 chr17 14149186 14149582 -71288898 + L1ME LINE L1 4928 5341 -805 215 247 82 14 chr17 14149601 14149674 -71288806 - L2 LINE L2 0 3313 3236 397 283 12 64 chr17 14149708 14149754 -71288726 + LTR16A LTR ERVL 99 146 -304 2545 138 41 5 chr17 14149754 14150167 -71288313 + MSTA LTR MaLR 1 428 0 397 283 12 64 chr17 14150167 14150293 -71288187 + LTR16A LTR ERVL 146 262 -188 276 313 103 36 chr17 14150421 14150616 -71287864 + L1ME LINE L1 5386 5593 -528 861 142 0 8 chr17 14150867 14150994 -71287486 - FLAM_C SINE Alu -16 127 2 2119 56 44 7 chr17 14151751 14152049 -71286431 - AluY SINE Alu 0 310 3 225 319 44 9 chr17 14152059 14152172 -71286308 + L2 LINE L2 1933 2049 -1265 1897 147 20 3 chr17 14152177 14152476 -71286004 - AluJb SINE Alu -8 304 1 182 311 67 52 chr17 14152555 14152822 -71285658 - L2 LINE L2 -1265 2049 1779 557 186 10 0 chr17 14152959 14153061 -71285419 - MER58B DNA MER1_type 0 341 239 1054 146 38 16 chr17 14153108 14153293 -71285187 - MER5A DNA MER1_type 0 189 1 751 282 0 5 chr17 14153568 14153777 -71284703 + MER63A DNA MER1_type 1 208 -2 259 289 94 57 chr17 14154221 14154380 -71284100 - MER5B DNA MER1_type -5 173 9 2014 137 0 49 chr17 14154470 14154798 -71283682 + AluJo SINE Alu 1 312 0 256 379 8 15 chr17 14154875 14155007 -71283473 - MIR3 SINE MIR -73 135 5 191 319 28 0 chr17 14156380 14156452 -71282028 + MIR SINE MIR 57 130 -78 687 101 0 0 chr17 14156622 14156721 -71281759 - L1PA8 LINE L1 -2 6170 6072 2275 117 0 0 chr17 14156893 14157201 -71281279 - AluSc SINE Alu -1 308 1 246 304 14 0 chr17 14157202 14157271 -71281209 - MIR SINE MIR -114 148 79 2357 100 0 3 chr17 14157763 14158073 -71280407 + AluSx SINE Alu 1 309 -3 262 203 54 27 chr17 14158750 14158824 -71279656 + L1MC5 LINE L1 7849 7924 -37 2328 105 0 3 chr17 14159216 14159521 -71278959 + AluSg SINE Alu 1 304 -6 2174 172 50 12 chr17 14159853 14159898 -71278582 + MSTA LTR MaLR 1 43 -385 1622 197 14 3 chr17 14159898 14160187 -71278293 + AluJb SINE Alu 6 297 -15 2174 172 50 12 chr17 14160187 14160567 -71277913 + MSTA LTR MaLR 43 428 0 464 289 185 35 chr17 14161095 14161441 -71277039 + MLT1L LTR MaLR 210 607 -8 335 295 33 16 chr17 14162026 14162148 -71276332 + L1ME1 LINE L1 6043 6166 0 462 304 104 66 chr17 14162148 14162290 -71276190 + L1M4 LINE L1 2235 2370 -3776 1980 112 0 25 chr17 14162290 14162576 -71275904 + AluSx SINE Alu 34 312 0 462 304 104 66 chr17 14162576 14163343 -71275137 + L1M4 LINE L1 2370 3179 -2967 596 215 40 105 chr17 14163437 14163665 -71274815 - MER58C DNA MER1_type -1 214 2 460 290 28 23 chr17 14163665 14163841 -71274639 + MER5B DNA MER1_type 2 178 0 884 185 45 6 chr17 14163849 14164027 -71274453 + MER5A DNA MER1_type 1 185 -4 21 36 0 0 chr17 14164252 14164280 -71274200 + AT_rich Low_complexity Low_complexity 1 28 0 2240 127 0 0 chr17 14165114 14165414 -71273066 + AluSg SINE Alu 1 300 -10 2067 121 0 4 chr17 14166858 14167220 -71271260 - AluSc SINE Alu 0 361 1 1541 174 61 0 chr17 14167749 14168050 -71270430 - AluJb SINE Alu 0 319 3 666 266 138 56 chr17 14168370 14168746 -71269734 - MLT1I LTR MaLR -2 407 1 345 216 11 23 chr17 14168782 14168870 -71269610 - LTR67 LTR ERVL -13 544 458 524 234 41 29 chr17 14169932 14170081 -71268399 - MLT1H LTR MaLR -15 609 384 473 302 58 50 chr17 14170137 14170415 -71268065 - MLT1H LTR MaLR -258 291 12 1149 269 72 75 chr17 14171493 14172218 -71266262 + Charlie7 DNA MER1_type 2 724 -1888 586 243 91 66 chr17 14172628 14172721 -71265759 - MIR SINE MIR -6 256 167 1984 147 54 48 chr17 14172721 14173000 -71265480 + MER1B DNA MER1_type 2 278 -2432 2162 95 0 11 chr17 14173000 14173283 -71265197 + AluSq SINE Alu 1 280 -33 411 21 0 0 chr17 14173283 14173331 -71265149 + (CA)n Simple_repeat Simple_repeat 1 48 0 1984 147 54 48 chr17 14173331 14173384 -71265096 + MER1B DNA MER1_type 277 337 0 586 243 91 66 chr17 14173384 14173395 -71265085 - MIR SINE MIR -95 167 158 2175 206 127 39 chr17 14173395 14173940 -71264540 + MLT1E LTR MaLR 1 593 0 586 243 91 66 chr17 14173940 14174077 -71264403 - MIR SINE MIR -104 158 8 513 316 0 13 chr17 14174426 14174584 -71263896 + MIR3 SINE MIR 20 175 -33 301 246 109 58 chr17 14175599 14175737 -71262743 + L2 LINE L2 2872 3016 -297 367 223 80 27 chr17 14175865 14175977 -71262503 + LTR16C LTR ERVL 371 488 -3 412 199 133 60 chr17 14176072 14176223 -71262257 + L2 LINE L2 3152 3313 0 207 0 0 0 chr17 14176585 14176608 -71261872 + (A)n Simple_repeat Simple_repeat 1 23 0 603 252 63 19 chr17 14177631 14177837 -71260643 + L2 LINE L2 2684 2898 -416 4073 154 24 63 chr17 14177901 14178429 -71260051 + L1MB3 LINE L1 5379 5863 -320 1761 114 0 4 chr17 14178429 14178665 -71259815 + AluSg SINE Alu 1 235 -75 4073 154 24 63 chr17 14178665 14178974 -71259506 + L1MB3 LINE L1 5863 6183 0 647 241 57 88 chr17 14179328 14179392 -71259088 + L1ME2 LINE L1 5812 5876 -288 2487 63 0 0 chr17 14179392 14179692 -71258788 + AluY SINE Alu 1 300 -11 647 241 57 88 chr17 14179692 14179979 -71258501 + L1ME2 LINE L1 5876 6152 -12 606 89 38 0 chr17 14180288 14180367 -71258113 + AluY SINE Alu 2 83 -228 2214 96 24 0 chr17 14180479 14180771 -71257709 + AluSp SINE Alu 1 299 -14 1131 166 9 23 chr17 14180943 14181160 -71257320 - AluSg/x SINE Alu -14 298 85 938 158 33 0 chr17 14181180 14181364 -71257116 - L1MA8 LINE L1 -244 6047 5858 349 291 30 15 chr17 14181505 14181639 -71256841 + LTR37A LTR ERV1 146 281 -145 592 137 11 0 chr17 14182474 14182569 -71255911 - MER83 LTR ERV1 0 448 353 2431 141 37 5 chr17 14182608 14183042 -71255438 + Tigger3b DNA MER2_type 209 656 -575 759 224 13 7 chr17 14183044 14183196 -71255284 - AluJb SINE Alu -12 300 148 1009 259 34 17 chr17 14185120 14185414 -71253066 - MER89-int LTR ERV1 -5142 1659 1361 1577 196 63 9 chr17 14185423 14185754 -71252726 - MLT1A1 LTR MaLR -4 361 13 339 244 0 22 chr17 14185766 14185856 -71252624 - MER89-int LTR ERV1 -5444 1357 1270 203 376 10 0 chr17 14186950 14187051 -71251429 + (CA)n Simple_repeat Simple_repeat 2 103 0 1402 181 67 38 chr17 14187945 14188541 -71249939 + L1MC/D LINE L1 2350 2961 -3579 * 1704 240 106 44 chr17 14188539 14189244 -71249236 + L1MC/D LINE L1 3369 4117 -2423 2717 162 27 17 chr17 14189274 14189593 -71248887 + Tigger7 DNA MER2_type 17 344 -389 2491 133 5 19 chr17 14189593 14189961 -71248519 + THE1B LTR MaLR 1 363 -1 2717 162 27 17 chr17 14189961 14190115 -71248365 + Tigger7 DNA MER2_type 344 495 -238 2292 78 7 7 chr17 14190115 14190410 -71248070 + AluY SINE Alu 1 295 -16 716 256 111 87 chr17 14190412 14191543 -71246937 + L1MC/D LINE L1 4950 5722 -818 920 224 45 5 chr17 14191669 14191870 -71246610 + MIR SINE MIR 28 236 -26 198 224 0 0 chr17 14191883 14191932 -71246548 + (CAT)n Simple_repeat Simple_repeat 2 50 0 22 35 0 0 chr17 14192511 14192540 -71245940 + AT_rich Low_complexity Low_complexity 1 29 0 986 277 113 38 chr17 14192708 14193232 -71245248 - MLT1L LTR MaLR -12 603 41 377 282 149 22 chr17 14193346 14193527 -71244953 + MLT1L LTR MaLR 1 204 -411 564 252 20 7 chr17 14193695 14193846 -71244634 + MLT1L LTR MaLR 455 607 -8 2445 68 0 0 chr17 14194349 14194642 -71243838 + AluY SINE Alu 15 307 -4 22 0 0 0 chr17 14195234 14195256 -71243224 + AT_rich Low_complexity Low_complexity 1 22 0 1452 147 56 56 chr17 14195256 14195562 -71242918 - L1MA9 LINE L1 -22 6290 5985 2579 117 28 53 chr17 14195626 14195670 -71242810 - MSTA LTR MaLR -2 426 382 2063 103 48 0 chr17 14195670 14195960 -71242520 + AluSc SINE Alu 1 304 -5 2579 117 28 53 chr17 14195960 14196352 -71242128 - MSTA LTR MaLR -46 382 1 1269 194 104 7 chr17 14196442 14196731 -71241749 + L1MD3 LINE L1 7655 7971 -24 915 179 124 79 chr17 14197275 14197695 -71240785 - L1MC5 LINE L1 -30 7931 7493 344 247 0 0 chr17 14197713 14197790 -71240690 - L1MC5 LINE L1 -518 7443 7367 917 326 32 58 chr17 14197897 14198355 -71240125 + L2 LINE L2 2270 2707 -607 2192 121 7 0 chr17 14198355 14198662 -71239818 + AluSq SINE Alu 1 309 -4 917 326 32 58 chr17 14198662 14198880 -71239600 + L2 LINE L2 2707 2929 -385 238 313 72 0 chr17 14199086 14199169 -71239311 - L2 LINE L2 -27 3286 3198 3024 183 19 42 chr17 14199212 14199779 -71238701 + MLT2B3 LTR ERVL 1 554 0 2166 114 13 0 chr17 14199902 14200209 -71238271 + AluSq SINE Alu 1 311 -2 639 184 0 88 chr17 14200678 14200741 -71237739 + AluJb SINE Alu 2 48 -264 2249 100 13 0 chr17 14200741 14201040 -71237440 - AluSp SINE Alu -10 303 1 639 184 0 88 chr17 14201040 14201112 -71237368 + AluJb SINE Alu 48 125 -187 469 57 11 114 chr17 14201112 14201200 -71237280 + MLT2B2 LTR ERVL 437 515 0 215 219 0 0 chr17 14201202 14201243 -71237237 + (TGAA)n Simple_repeat Simple_repeat 2 42 0 1041 183 0 0 chr17 14201279 14201443 -71237037 + AluJb SINE Alu 134 297 -15 277 271 105 60 chr17 14202585 14202851 -71235629 - HAL1b LINE L1 -650 698 421 5853 182 22 12 chr17 14203109 14204526 -71233954 - L1MC2 LINE L1 -8 6336 4906 229 308 19 65 chr17 14204822 14204929 -71233551 - MER94 DNA DNA -27 107 6 378 225 12 0 chr17 14205097 14205177 -71233303 - MIR SINE MIR -71 191 111 1711 151 7 22 chr17 14205433 14205711 -71232769 + AluJb SINE Alu 1 274 -38 315 0 0 0 chr17 14205711 14205746 -71232734 + (TC)n Simple_repeat Simple_repeat 1 35 0 * 378 0 0 0 chr17 14205745 14205787 -71232693 + (CA)n Simple_repeat Simple_repeat 1 42 0 433 223 23 0 chr17 14206399 14206505 -71231975 + MER5A DNA MER1_type 4 112 -77 693 106 0 0 chr17 14207802 14207906 -71230574 + (TTCC)n Simple_repeat Simple_repeat 3 106 0 1952 94 91 14 chr17 14207906 14208193 -71230287 - AluSc SINE Alu 0 309 1 255 240 0 0 chr17 14208195 14208245 -71230235 + MER91 DNA MER1_type 144 193 -3 1989 121 0 3 chr17 14209636 14209918 -71228562 + AluSx SINE Alu 1 281 -31 891 316 10 10 chr17 14209940 14210253 -71228227 - LTR16B LTR ERVL -114 350 38 1960 110 24 17 chr17 14210395 14210687 -71227793 + L1MA8 LINE L1 5995 6288 -3 2230 119 0 6 chr17 14210698 14211009 -71227471 + AluSx SINE Alu 1 309 -3 234 226 172 61 chr17 14211813 14211937 -71226543 - MIR SINE MIR -66 142 35 353 105 0 132 chr17 14212002 14212078 -71226402 - L1PA10 LINE L1 0 6168 6103 284 186 32 186 chr17 14212123 14212279 -71226201 + L1MC5 LINE L1 7786 7917 -44 587 272 146 22 chr17 14213349 14213713 -71224767 - L1ME LINE L1 -365 5756 5348 799 168 8 0 chr17 14213801 14213932 -71224548 - FLAM_A SINE Alu -1 132 1 441 317 95 35 chr17 14214253 14214591 -71223889 - L1ME LINE L1 -1301 4845 4488 488 269 65 104 chr17 14214656 14214965 -71223515 + MLT1J2 LTR MaLR 85 422 -28 2544 153 37 58 chr17 14215366 14215881 -71222599 + MLT1D LTR MaLR 1 504 -1 531 266 53 53 chr17 14216114 14216340 -71222140 - MIR SINE MIR -29 233 8 202 0 29 57 chr17 14216880 14216915 -71221565 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 358 250 136 7 chr17 14217572 14217712 -71220768 - HAL1b LINE L1 -718 630 473 220 245 50 145 chr17 14217934 14217988 -71220492 + MIR SINE MIR 47 105 -157 1212 191 130 77 chr17 14217988 14218058 -71220422 + MLT1C LTR MaLR 2 67 -400 1808 176 3 3 chr17 14218058 14218370 -71220110 - AluJo SINE Alu 0 312 1 1212 191 130 77 chr17 14218370 14218738 -71219742 + MLT1C LTR MaLR 67 463 -4 220 245 50 145 chr17 14218738 14218842 -71219638 + MIR SINE MIR 105 190 -72 184 265 15 73 chr17 14219047 14219115 -71219365 - MER5A DNA MER1_type -45 144 81 355 303 42 42 chr17 14219407 14219526 -71218954 + MIR SINE MIR 16 134 -128 * 504 127 57 0 chr17 14219525 14219633 -71218847 - AluYb8 SINE Alu -186 132 2 2090 90 0 0 chr17 14219847 14220114 -71218366 + AluY SINE Alu 37 303 -8 568 320 29 39 chr17 14220939 14221320 -71217160 - MLT1L LTR MaLR -112 503 127 917 192 210 0 chr17 14221963 14222254 -71216226 + LTR50 LTR ERVL 444 795 0 22 35 0 0 chr17 14223037 14223066 -71215414 + AT_rich Low_complexity Low_complexity 1 29 0 600 206 103 3 chr17 14223359 14223633 -71214847 - MLT1J LTR MaLR -27 484 93 3805 171 15 18 chr17 14223744 14224483 -71213997 - L1MB8 LINE L1 -6 6172 5436 224 278 135 48 chr17 14225182 14225308 -71213172 + L2 LINE L2 2957 3093 -179 181 164 18 91 chr17 14226812 14226867 -71211613 - L2 LINE L2 0 3272 3222 291 310 255 17 chr17 14230237 14230813 -71207667 + L2 LINE L2 2561 3286 -27 494 260 64 35 chr17 14230891 14231064 -71207416 - MIR SINE MIR -79 183 6 2677 218 74 35 chr17 14231112 14231905 -71206575 - L1ME1 LINE L1 -16 6150 5305 1844 154 20 10 chr17 14231905 14232203 -71206277 - AluJo SINE Alu -11 301 1 2677 218 74 35 chr17 14232203 14232446 -71206034 - L1ME1 LINE L1 -861 5305 5073 685 237 58 10 chr17 14232493 14232700 -71205780 - L1ME1 LINE L1 -1818 4328 4112 299 299 26 0 chr17 14233178 14233255 -71205225 + L2 LINE L2 3191 3269 -44 531 118 41 84 chr17 14233256 14233397 -71205083 + L1 LINE L1 5232 5366 -780 880 113 0 0 chr17 14233398 14233513 -71204967 + FLAM_C SINE Alu 11 125 -18 1386 194 99 0 chr17 14233528 14233812 -71204668 + AluJb SINE Alu 1 312 0 2116 140 8 21 chr17 14233812 14234198 -71204282 + L1P5 LINE L1 5352 5732 -424 181 338 162 32 chr17 14234242 14234742 -71203738 - L2 LINE L2 -616 2698 2134 414 333 57 50 chr17 14234757 14235036 -71203444 + L2 LINE L2 2987 3267 -5 1752 179 7 10 chr17 14235550 14235847 -71202633 - AluJo SINE Alu -16 296 1 2573 151 32 0 chr17 14236173 14236610 -71201870 - MSTB2 LTR MaLR -4 453 3 673 124 9 0 chr17 14236778 14236883 -71201597 + THE1C LTR MaLR 270 375 0 9811 115 21 45 chr17 14236885 14238501 -71199979 + THE1C-int LTR MaLR 3 1580 0 1792 149 58 25 chr17 14238501 14238864 -71199616 + THE1C LTR MaLR 1 375 0 12158 130 26 7 chr17 14238875 14239463 -71199017 - Tigger1 DNA MER2_type -373 2045 1470 2010 75 13 79 chr17 14239463 14239768 -71198712 + AluSg SINE Alu 17 301 -9 12158 130 26 7 chr17 14239768 14241185 -71197295 - Tigger1 DNA MER2_type -948 1470 1 370 208 119 0 chr17 14241336 14241437 -71197043 + MER94 DNA DNA 3 115 -19 13846 125 16 15 chr17 14241757 14242825 -71195655 - Ricksha DNA DNA -10 3236 2170 2082 103 7 7 chr17 14242825 14243144 -71195336 + AluSx SINE Alu 1 319 0 13846 125 16 15 chr17 14243144 14244410 -71194070 - Ricksha DNA DNA -1076 2170 905 869 166 28 93 chr17 14244410 14244657 -71193823 - MLT2B3 LTR ERVL 0 554 324 2285 141 14 0 chr17 14244658 14244921 -71193559 - Ricksha DNA DNA -2632 614 347 643 158 44 0 chr17 14244921 14245035 -71193445 - ERVL LTR ERVL -3 5761 5643 537 155 146 0 chr17 14245041 14245144 -71193336 - Ricksha DNA DNA -1928 118 1 189 94 0 0 chr17 14246652 14246684 -71191796 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 949 209 67 27 chr17 14246769 14246994 -71191486 + MER8 DNA MER2_type 6 239 0 366 280 72 8 chr17 14247176 14247301 -71191179 - MER94 DNA DNA -1 133 1 370 255 0 0 chr17 14247631 14247729 -71190751 - MER103 DNA DNA -67 99 2 253 288 163 12 chr17 14248783 14248943 -71189537 - L1ME LINE L1 -302 5819 5636 251 304 63 144 chr17 14249044 14249156 -71189324 - L2 LINE L2 -2 3270 3150 1445 205 49 9 chr17 14249156 14249483 -71188997 + MER58B DNA MER1_type 1 340 -1 251 304 63 144 chr17 14249483 14249752 -71188728 - L2 LINE L2 -122 3150 2920 370 292 154 60 chr17 14249786 14249853 -71188627 + MIR SINE MIR 2 61 -201 2187 72 10 17 chr17 14249853 14250146 -71188334 + AluY SINE Alu 1 291 -20 370 292 154 60 chr17 14250146 14250311 -71188169 + MIR SINE MIR 61 256 -6 239 246 0 0 chr17 14250498 14250555 -71187925 - L2 LINE L2 -704 2610 2554 2559 84 0 0 chr17 14250636 14250947 -71187533 - AluY SINE Alu 0 311 1 312 353 61 49 chr17 14250983 14251329 -71187151 + L2 LINE L2 2249 2598 -716 183 152 30 0 chr17 14251584 14251617 -71186863 + MIR SINE MIR 117 150 -112 418 227 20 47 chr17 14252065 14252082 -71186398 - L1MA10 LINE L1 -2 6332 6316 1525 229 49 82 chr17 14252082 14252754 -71185726 - L1ME1 LINE L1 -5 6161 5512 778 287 68 24 chr17 14252784 14253209 -71185271 + ERVL-F LTR ERVL 5278 5721 -43 1346 249 74 75 chr17 14253243 14253847 -71184633 + MLT2F LTR ERVL 3 607 -56 1982 132 39 39 chr17 14253847 14254211 -71184269 + THE1B LTR MaLR 1 364 0 1346 249 74 75 chr17 14254211 14254268 -71184212 + MLT2F LTR ERVL 607 663 0 22 0 0 0 chr17 14254427 14254449 -71184031 + AT_rich Low_complexity Low_complexity 1 22 0 21 57 0 0 chr17 14254484 14254519 -71183961 + AT_rich Low_complexity Low_complexity 1 35 0 432 0 0 0 chr17 14254806 14254854 -71183626 + (TG)n Simple_repeat Simple_repeat 2 49 0 1994 145 3 7 chr17 14256089 14256392 -71182088 - AluJb SINE Alu -10 302 1 558 292 93 19 chr17 14256498 14256755 -71181725 - MLT1K LTR MaLR 0 588 313 360 199 46 26 chr17 14257338 14257489 -71180991 + (TTATA)n Simple_repeat Simple_repeat 5 158 0 244 180 16 16 chr17 14258449 14258510 -71179970 + L1ME4a LINE L1 5965 6025 -96 6953 111 20 20 chr17 14258598 14260296 -71178184 - L1MA2 LINE L1 0 6304 4609 754 352 52 28 chr17 14260493 14260919 -71177561 + L2 LINE L2 2527 2962 -352 198 103 0 0 chr17 14261562 14261591 -71176889 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 22 35 0 0 chr17 14263109 14263138 -71175342 + AT_rich Low_complexity Low_complexity 1 29 0 1847 143 37 3 chr17 14264823 14265123 -71173357 - AluJo SINE Alu -2 310 1 322 268 126 65 chr17 14265847 14266078 -71172402 + L1ME4a LINE L1 5628 5872 -249 761 219 96 14 chr17 14267249 14267468 -71171012 - MIR SINE MIR -13 249 13 242 260 68 73 chr17 14268007 14268199 -71170281 + L1ME4a LINE L1 5733 5923 -198 189 0 0 0 chr17 14268409 14268430 -71170050 + (A)n Simple_repeat Simple_repeat 1 21 0 329 287 88 29 chr17 14268936 14269072 -71169408 - L1ME4a LINE L1 -208 5913 5770 402 252 76 38 chr17 14269076 14269314 -71169166 - L1ME4a LINE L1 -388 5733 5487 571 263 21 21 chr17 14270792 14270978 -71167502 + MER5A DNA MER1_type 2 187 -2 21 0 0 0 chr17 14271068 14271089 -71167391 + AT_rich Low_complexity Low_complexity 1 21 0 866 137 13 13 chr17 14271443 14271596 -71166884 + L1MD1 LINE L1 6090 6242 0 26 30 0 0 chr17 14272963 14272996 -71165484 + AT_rich Low_complexity Low_complexity 1 33 0 22 0 0 0 chr17 14273537 14273559 -71164921 + AT_rich Low_complexity Low_complexity 1 22 0 35 78 0 0 chr17 14273788 14273865 -71164615 + AT_rich Low_complexity Low_complexity 1 77 0 27 0 0 0 chr17 14274903 14274930 -71163550 + AT_rich Low_complexity Low_complexity 1 27 0 293 320 87 23 chr17 14275770 14275942 -71162538 - MIR SINE MIR -74 188 6 30 69 0 0 chr17 14277036 14277094 -71161386 + AT_rich Low_complexity Low_complexity 1 58 0 22 0 0 0 chr17 14277213 14277235 -71161245 + AT_rich Low_complexity Low_complexity 1 22 0 2040 109 7 10 chr17 14277235 14277539 -71160941 + AluSx SINE Alu 1 303 -9 402 21 0 0 chr17 14278415 14278462 -71160018 + (CA)n Simple_repeat Simple_repeat 1 47 0 193 288 180 36 chr17 14283115 14283226 -71155254 + MIR3 SINE MIR 12 138 -70 460 171 76 38 chr17 14284761 14284866 -71153614 - MIR SINE MIR -98 164 56 1251 320 159 27 chr17 14285762 14287029 -71151451 + L2 LINE L2 1851 3272 0 3454 157 57 72 chr17 14288063 14288860 -71149620 + LTR1 LTR ERV1 1 785 0 1144 263 80 62 chr17 14289463 14289704 -71148776 - L2 LINE L2 -558 2756 2521 198 0 0 0 chr17 14289704 14289726 -71148754 + (TG)n Simple_repeat Simple_repeat 2 23 0 1144 263 80 62 chr17 14289726 14289982 -71148498 - L2 LINE L2 -793 2521 2250 580 172 52 0 chr17 14290065 14290181 -71148299 - Tigger7 DNA MER2_type -2349 138 17 3672 162 30 3 chr17 14290366 14291039 -71147441 - L1PB4 LINE L1 -13 6143 5453 245 260 0 0 chr17 14291274 14291324 -71147156 - L2 LINE L2 -1 3271 3222 180 231 0 0 chr17 14291965 14292017 -71146463 + A-rich Low_complexity Low_complexity 6 57 0 223 361 83 0 chr17 14293278 14293386 -71145094 - L2 LINE L2 -452 2862 2746 268 321 43 51 chr17 14293397 14293640 -71144840 + L2 LINE L2 2735 2978 -294 250 188 0 31 chr17 14296088 14296152 -71142328 + (CATA)n Simple_repeat Simple_repeat 2 63 0 234 230 0 95 chr17 14298080 14298154 -71140326 + MIR SINE MIR 186 252 -10 536 321 30 0 chr17 14298386 14298554 -71139926 + L3 LINE CR1 1262 1434 -143 239 0 32 0 chr17 14298679 14298710 -71139770 + (TG)n Simple_repeat Simple_repeat 2 33 0 192 77 0 0 chr17 14298837 14298863 -71139617 + (GAAA)n Simple_repeat Simple_repeat 2 27 0 371 181 219 0 chr17 14298952 14299057 -71139423 + MER94 DNA DNA 7 134 0 781 249 34 10 chr17 14299178 14299387 -71139093 + MER20 DNA MER1_type 1 214 -5 304 293 36 50 chr17 14299544 14299684 -71138796 + L1ME4a LINE L1 5299 5436 -897 473 273 68 70 chr17 14299887 14300064 -71138416 + L1ME4a LINE L1 5634 5810 -311 2100 126 0 10 chr17 14300064 14300373 -71138107 + AluSq SINE Alu 1 306 -7 473 273 68 70 chr17 14300373 14300595 -71137885 + L1ME4a LINE L1 5810 6032 -89 253 315 90 0 chr17 14300597 14300686 -71137794 + L2 LINE L2 3205 3301 -12 230 286 0 0 chr17 14300988 14301044 -71137436 + L1ME4a LINE L1 5622 5677 -444 323 296 26 0 chr17 14301054 14301169 -71137311 + L1ME4a LINE L1 5731 5848 -273 31 58 0 0 chr17 14301717 14301769 -71136711 + AT_rich Low_complexity Low_complexity 1 52 0 208 266 38 63 chr17 14304529 14304608 -71133872 - L2 LINE L2 0 3272 3196 532 336 169 18 chr17 14305171 14305317 -71133163 + L2 LINE L2 2422 2545 -727 1102 187 48 5 chr17 14305317 14305526 -71132954 + MER20 DNA MER1_type 1 218 -1 532 336 169 18 chr17 14305526 14306087 -71132393 + L2 LINE L2 2545 3240 -32 1133 159 26 10 chr17 14308303 14308498 -71129982 - MER2 DNA MER2_type -8 337 140 216 0 0 0 chr17 14309678 14309702 -71128778 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1723 171 23 0 chr17 14309712 14310016 -71128464 + AluJo SINE Alu 2 312 0 2297 144 81 0 chr17 14310066 14310461 -71128019 + MSTC LTR MaLR 2 428 0 1478 213 22 6 chr17 14310537 14310851 -71127629 + MLT1E3 LTR MaLR 304 622 -2 258 341 88 0 chr17 14310872 14311054 -71127426 - L2 LINE L2 -609 2705 2508 640 333 123 12 chr17 14311121 14311520 -71126960 - L3 LINE CR1 -19 1558 1116 222 255 0 0 chr17 14311525 14311576 -71126904 + MIR SINE MIR 197 247 -15 225 179 30 15 chr17 14312041 14312108 -71126372 + (TA)n Simple_repeat Simple_repeat 1 68 0 773 180 0 37 chr17 14312313 14312474 -71126006 - FRAM SINE Alu -21 155 1 611 340 45 47 chr17 14315416 14315775 -71122705 - L2 LINE L2 -1 3271 2914 21 0 0 0 chr17 14315918 14315939 -71122541 + AT_rich Low_complexity Low_complexity 1 21 0 185 306 65 65 chr17 14316516 14316640 -71121840 - MER5A DNA MER1_type -18 171 48 * 290 264 116 31 chr17 14316537 14316666 -71121814 + MER5A DNA MER1_type 49 188 -1 410 324 64 62 chr17 14317340 14317729 -71120751 + MLT1J LTR MaLR 116 505 -6 458 219 35 9 chr17 14318863 14318977 -71119503 - L2 LINE L2 -3 3310 3194 312 309 32 32 chr17 14319171 14319297 -71119183 + L2 LINE L2 3183 3308 -5 35 41 0 0 chr17 14320062 14320111 -71118369 + AT_rich Low_complexity Low_complexity 1 49 0 411 281 120 20 chr17 14320215 14320541 -71117939 + L1ME4a LINE L1 5161 5513 -657 516 290 124 19 chr17 14320544 14320803 -71117677 + L1ME4a LINE L1 5537 5822 -299 416 272 16 89 chr17 14320783 14321109 -71117371 + L1MC4a LINE L1 5643 5822 -340 * 748 234 77 30 chr17 14321124 14321359 -71117121 - MIR SINE MIR 0 262 17 2336 92 7 0 chr17 14321421 14321716 -71116764 + AluSq SINE Alu 1 297 -16 347 261 28 28 chr17 14321911 14322087 -71116393 + L1ME4a LINE L1 5944 6119 -2 437 294 7 7 chr17 14323461 14323607 -71114873 + MER5A DNA MER1_type 7 152 -37 25 0 0 0 chr17 14323677 14323702 -71114778 + AT_rich Low_complexity Low_complexity 1 25 0 28 48 0 0 chr17 14323898 14323940 -71114540 + AT_rich Low_complexity Low_complexity 1 42 0 468 338 68 28 chr17 14324065 14324535 -71113945 + L2 LINE L2 1963 2451 -863 821 231 49 0 chr17 14324633 14324836 -71113644 - MIR SINE MIR -31 231 19 210 174 0 0 chr17 14325016 14325062 -71113418 + CT-rich Low_complexity Low_complexity 1 46 0 793 186 106 6 chr17 14325164 14325325 -71113155 - MER58A DNA MER1_type -4 220 44 186 43 0 0 chr17 14325540 14325563 -71112917 + (CAAAA)n Simple_repeat Simple_repeat 1 23 0 2464 61 34 0 chr17 14325868 14326165 -71112315 + AluY SINE Alu 1 307 -4 493 278 99 10 chr17 14326170 14326474 -71112006 + L1ME4a LINE L1 5521 5857 -264 252 86 0 0 chr17 14326501 14326536 -71111944 + (CATA)n Simple_repeat Simple_repeat 2 36 0 534 274 114 20 chr17 14327152 14327353 -71111127 - MIR SINE MIR -21 241 22 189 0 0 0 chr17 14328437 14328458 -71110022 + (A)n Simple_repeat Simple_repeat 1 21 0 1357 155 159 7 chr17 14330006 14330277 -71108203 + AluJb SINE Alu 1 312 0 2469 69 0 7 chr17 14330368 14330672 -71107808 - AluY SINE Alu -9 302 1 229 330 32 0 chr17 14330872 14330966 -71107514 - MIR SINE MIR -60 148 52 631 85 24 0 chr17 14333775 14333857 -71104623 + AluSq/x SINE Alu 50 133 -179 2196 121 0 0 chr17 14333863 14334160 -71104320 + AluSq SINE Alu 4 300 -13 2100 118 0 56 chr17 14334457 14334779 -71103701 - AluSx SINE Alu -8 304 1 231 270 87 26 chr17 14335371 14335486 -71102994 - L1MC5 LINE L1 -44 7917 7796 395 234 0 11 chr17 14335499 14335593 -71102887 - MIR3 SINE MIR -34 174 82 660 289 45 28 chr17 14335855 14336146 -71102334 - L2 LINE L2 -3 3310 3015 1973 119 26 13 chr17 14337164 14337466 -71101014 + AluJo SINE Alu 1 306 -6 300 303 48 28 chr17 14337680 14337825 -71100655 + MIR SINE MIR 46 193 -69 1730 46 0 9 chr17 14338346 14338565 -71099915 + L1PA5 LINE L1 5938 6154 0 264 316 0 13 chr17 14338732 14338808 -71099672 - MIR SINE MIR -138 124 50 293 272 22 11 chr17 14338902 14338994 -71099486 + MER5B DNA MER1_type 2 94 -84 2274 105 0 0 chr17 14339316 14339612 -71098868 + AluSx SINE Alu 1 296 -16 227 256 12 37 chr17 14340067 14340149 -71098331 - MIR3 SINE MIR -35 173 94 1911 178 0 3 chr17 14340530 14340839 -71097641 - AluJo SINE Alu -4 308 1 516 168 43 54 chr17 14341200 14341385 -71097095 + L1M4 LINE L1 5304 5495 -671 2255 104 10 0 chr17 14342880 14343187 -71095293 + AluSp SINE Alu 4 313 0 26 0 0 0 chr17 14343676 14343702 -71094778 + AT_rich Low_complexity Low_complexity 1 26 0 501 184 7 52 chr17 14345050 14345186 -71093294 + L1PA13 LINE L1 6026 6155 -8 2067 129 0 10 chr17 14345227 14345537 -71092943 + AluSq SINE Alu 1 307 -6 3296 167 4 51 chr17 14345550 14346158 -71092322 + L1MA7 LINE L1 5620 6194 -97 2480 78 0 3 chr17 14346158 14346465 -71092015 - AluSc SINE Alu -3 306 1 3296 167 4 51 chr17 14346465 14346539 -71091941 + L1MA7 LINE L1 6194 6270 -21 671 317 33 12 chr17 14346622 14346865 -71091615 + MIR SINE MIR 15 262 0 473 291 64 43 chr17 14347761 14347995 -71090485 + MIR SINE MIR 23 261 -1 2573 147 40 27 chr17 14348524 14348544 -71089936 - MER31A LTR ERV1 0 485 467 2388 97 0 0 chr17 14348544 14348844 -71089636 + AluSx SINE Alu 1 300 -12 2573 147 40 27 chr17 14348844 14349300 -71089180 - MER31A LTR ERV1 -18 467 3 211 301 29 48 chr17 14349791 14349921 -71088559 - MIR SINE MIR -72 136 40 2155 138 0 0 chr17 14350684 14350995 -71087485 + AluSp SINE Alu 1 311 -2 2132 115 3 3 chr17 14351003 14351289 -71087191 + AluSc SINE Alu 1 286 -23 327 261 106 37 chr17 14351316 14351477 -71087003 + MER5B DNA MER1_type 6 177 -1 2099 115 3 33 chr17 14351790 14352094 -71086386 + AluSx SINE Alu 1 295 -17 823 157 27 0 chr17 14352424 14352571 -71085909 + MSTC LTR MaLR 228 378 -50 191 146 24 0 chr17 14352571 14352612 -71085868 + GA-rich Low_complexity Low_complexity 1 42 0 528 199 45 58 chr17 14353435 14353591 -71084889 - L1ME1 LINE L1 -2 6164 6011 2274 109 3 0 chr17 14353711 14354014 -71084466 - AluSx SINE Alu -8 304 1 243 150 0 0 chr17 14354113 14354153 -71084327 + MIR SINE MIR 106 145 -63 243 108 0 0 chr17 14354235 14354272 -71084208 + MIR SINE MIR 109 145 -63 1657 168 43 40 chr17 14354630 14354912 -71083568 + L1MC1 LINE L1 5981 6266 -67 750 207 35 12 chr17 14354912 14355081 -71083399 + FAM SINE Alu 1 173 -2 1657 168 43 40 chr17 14355081 14355150 -71083330 + L1MC1 LINE L1 6266 6333 0 1097 161 39 222 chr17 14355182 14355366 -71083114 + MER31A LTR ERV1 4 36 -430 1829 83 29 4 chr17 14355366 14355607 -71082873 + AluSp SINE Alu 1 247 -66 1097 161 39 222 chr17 14355607 14355936 -71082544 + MER31A LTR ERV1 36 423 -43 2278 88 0 7 chr17 14355936 14356241 -71082239 - AluSg SINE Alu -7 303 1 234 62 0 0 chr17 14356572 14356604 -71081876 + (A)n Simple_repeat Simple_repeat 1 32 0 306 0 0 0 chr17 14358842 14358876 -71079604 + (CA)n Simple_repeat Simple_repeat 2 35 0 242 288 135 12 chr17 14358924 14359087 -71079393 + MIR3 SINE MIR 5 187 -21 299 141 90 13 chr17 14359347 14359425 -71079055 + MIR SINE MIR 80 163 -99 506 127 25 34 chr17 14359842 14359960 -71078520 + T-rich Low_complexity Low_complexity 3 119 0 * 936 136 0 27 chr17 14359949 14360133 -71078347 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 759 181 0 21 chr17 14360563 14360707 -71077773 - FLAM_C SINE Alu 0 143 3 203 132 53 0 chr17 14361661 14361699 -71076781 + (TGAA)n Simple_repeat Simple_repeat 1 40 0 2433 84 0 7 chr17 14362477 14362787 -71075693 - AluSq SINE Alu -2 311 4 197 32 0 32 chr17 14362905 14362936 -71075544 + (TTTTTG)n Simple_repeat Simple_repeat 2 31 0 315 161 0 0 chr17 14363365 14363421 -71075059 + (CA)n Simple_repeat Simple_repeat 1 56 0 1331 204 57 52 chr17 14363778 14364185 -71074295 + LTR37A LTR ERV1 18 426 0 1762 166 7 7 chr17 14364523 14364800 -71073680 + AluJo SINE Alu 11 287 -25 614 164 0 9 chr17 14364909 14365019 -71073461 + FLAM_A SINE Alu 33 141 -1 2411 94 0 7 chr17 14366221 14366528 -71071952 + AluSg SINE Alu 1 305 -5 232 328 0 31 chr17 14367079 14367207 -71071273 - MIR SINE MIR -61 147 24 21 0 0 0 chr17 14367418 14367439 -71071041 + AT_rich Low_complexity Low_complexity 1 21 0 303 93 0 0 chr17 14367441 14367484 -71070996 + (ATG)n Simple_repeat Simple_repeat 1 43 0 181 274 91 35 chr17 14368947 14369144 -71069336 + L2 LINE L2 2843 3050 -222 188 320 70 10 chr17 14369257 14369357 -71069123 + L2 LINE L2 2639 2744 -570 1413 67 52 5 chr17 14369450 14369644 -71068836 + L1PB1 LINE L1 5949 6151 0 310 147 15 59 chr17 14369742 14369810 -71068670 + L2 LINE L2 3156 3220 -93 227 182 0 23 chr17 14373516 14373560 -71064920 + MER103 DNA DNA 57 99 -67 2192 99 7 0 chr17 14373591 14373884 -71064596 - AluSq SINE Alu -16 297 3 304 202 182 10 chr17 14373925 14374024 -71064456 + MER5C DNA MER1_type 9 124 -200 407 306 62 0 chr17 14374724 14374868 -71063612 - Charlie8 DNA MER1_type -2211 206 54 824 225 50 46 chr17 14374875 14375137 -71063343 + L1ME3A LINE L1 5906 6168 -2 2351 77 3 0 chr17 14375148 14375458 -71063022 + AluSp SINE Alu 1 311 -2 2210 94 3 0 chr17 14375557 14375856 -71062624 + AluSq SINE Alu 1 300 -13 992 94 0 0 chr17 14376159 14376286 -71062194 + AluSg SINE Alu 1 127 -183 308 127 18 0 chr17 14376291 14376346 -71062134 + (CA)n Simple_repeat Simple_repeat 2 57 0 1188 117 0 11 chr17 14376346 14376525 -71061955 + AluSg SINE Alu 127 303 -9 265 241 188 80 chr17 14377148 14377260 -71061220 + MIR SINE MIR 69 192 -70 1548 182 35 10 chr17 14377734 14378047 -71060433 + L1MC1 LINE L1 6004 6324 -9 1417 122 94 73 chr17 14378048 14378336 -71060144 + AluJo SINE Alu 1 294 -18 24 0 0 0 chr17 14379853 14379877 -71058603 + GC_rich Low_complexity Low_complexity 1 24 0 22 35 0 0 chr17 14381150 14381179 -71057301 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr17 14381850 14381871 -71056609 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr17 14381988 14382016 -71056464 + AT_rich Low_complexity Low_complexity 1 28 0 1035 216 82 9 chr17 14383414 14383645 -71054835 + MIR SINE MIR 10 257 -5 211 259 19 0 chr17 14385848 14385902 -71052578 - MIR SINE MIR -196 66 12 28 61 0 0 chr17 14386712 14386761 -71051719 + GC_rich Low_complexity Low_complexity 1 49 0 23 0 0 0 chr17 14387823 14387846 -71050634 + GC_rich Low_complexity Low_complexity 1 23 0 378 0 0 0 chr17 14388951 14388993 -71049487 + (TG)n Simple_repeat Simple_repeat 2 43 0 233 333 133 8 chr17 14391463 14391583 -71046897 + MIR3 SINE MIR 68 202 -6 326 239 160 41 chr17 14392554 14392847 -71045633 + LTR33 LTR ERVL 194 521 0 200 316 160 47 chr17 14392941 14393197 -71045283 + L2 LINE L2 1050 1334 -1980 733 249 161 42 chr17 14393447 14393801 -71044679 + LTR16A LTR ERVL 52 447 -3 225 0 0 0 chr17 14393849 14393874 -71044606 + (T)n Simple_repeat Simple_repeat 1 25 0 634 277 88 56 chr17 14394382 14394426 -71044054 - HAL1b LINE L1 -346 1002 961 2231 82 3 3 chr17 14394426 14394729 -71043751 + AluSc SINE Alu 1 303 -6 634 277 88 56 chr17 14394729 14395240 -71043240 - HAL1b LINE L1 -387 961 429 1821 148 7 3 chr17 14395606 14395903 -71042577 - AluJo SINE Alu -10 302 5 1752 158 74 6 chr17 14396383 14396454 -71042026 + MER7A DNA MER2_type 3 68 -2970 3437 57 0 0 chr17 14396454 14396877 -71041603 + L1PA5 LINE L1 5730 6152 -2 1752 158 74 6 chr17 14396877 14397128 -71041352 + MER7A DNA MER2_type 68 345 -1 4290 137 95 16 chr17 14397492 14397569 -71040911 - L1MC2 LINE L1 -12 6332 6262 417 54 0 0 chr17 14397569 14397625 -71040855 + (CA)n Simple_repeat Simple_repeat 2 57 0 1714 142 91 34 chr17 14397625 14397977 -71040503 - THE1C LTR MaLR 0 375 4 342 0 0 0 chr17 14397977 14398015 -71040465 + (TC)n Simple_repeat Simple_repeat 1 38 0 255 79 0 0 chr17 14398014 14398052 -71040428 + (CA)n Simple_repeat Simple_repeat 1 38 0 4290 137 95 16 chr17 14398015 14398334 -71040146 - L1MC2 LINE L1 -82 6262 5970 1139 206 56 80 chr17 14398334 14398708 -71039772 + MLT1A1 LTR MaLR 1 365 0 4290 137 95 16 chr17 14398708 14399131 -71039349 - L1MC2 LINE L1 -374 5970 5485 23 0 0 0 chr17 14399144 14399167 -71039313 + AT_rich Low_complexity Low_complexity 1 23 0 1575 166 21 14 chr17 14399301 14399623 -71038857 - AluJo SINE Alu 0 324 1 362 271 118 65 chr17 14399672 14399934 -71038546 - L1M4c LINE L1 -3992 2392 2117 241 235 0 0 chr17 14399959 14400010 -71038470 + MLT1I LTR MaLR 93 143 -266 303 216 224 0 chr17 14400192 14400298 -71038182 + MLT1H1 LTR MaLR 421 555 0 532 345 99 30 chr17 14400398 14400760 -71037720 - HAL1 LINE L1 -1009 1498 1112 2131 108 3 0 chr17 14400850 14401156 -71037324 + AluSp SINE Alu 1 307 -6 1257 328 127 33 chr17 14401738 14401876 -71036604 + L2 LINE L2 1921 2045 -1268 5417 134 22 43 chr17 14401876 14402057 -71036423 + MER49 LTR ERV1 1 184 -739 1867 154 3 3 chr17 14402057 14402362 -71036118 - AluJb SINE Alu -7 305 1 5417 134 22 43 chr17 14402362 14402435 -71036045 + MER49 LTR ERV1 184 257 -666 1541 163 3 49 chr17 14402435 14402742 -71035738 + AluJo SINE Alu 1 293 -19 5417 134 22 43 chr17 14402742 14403429 -71035051 + MER49 LTR ERV1 257 923 0 1257 328 127 33 chr17 14403429 14403493 -71034987 + L2 LINE L2 2045 2102 -1211 1052 110 87 83 chr17 14403493 14403711 -71034769 + MER20 DNA MER1_type 1 219 0 1257 328 127 33 chr17 14403711 14404667 -71033813 + L2 LINE L2 2102 3196 -117 189 274 41 41 chr17 14404719 14404792 -71033688 + MIR SINE MIR 175 247 -15 522 147 343 28 chr17 14404917 14405060 -71033420 + MER5A DNA MER1_type 1 188 -1 207 204 0 0 chr17 14405069 14405113 -71033367 + T-rich Low_complexity Low_complexity 1 44 0 3621 180 19 22 chr17 14405129 14405517 -71032963 - L1MB2 LINE L1 -53 6118 5731 2132 63 0 88 chr17 14405517 14405848 -71032632 - AluY SINE Alu -9 302 1 3621 180 19 22 chr17 14405848 14406176 -71032304 - L1MB2 LINE L1 -440 5731 5404 2126 104 0 0 chr17 14407881 14408179 -71030301 - AluSx SINE Alu -14 298 1 252 276 69 0 chr17 14408236 14408323 -71030157 + MIR SINE MIR 61 153 -109 298 203 81 0 chr17 14408743 14408817 -71029663 - Charlie8 DNA MER1_type -2235 182 103 2134 98 3 3 chr17 14409042 14409338 -71029142 - AluSc SINE Alu -13 296 1 194 303 132 0 chr17 14409852 14409928 -71028552 - L2 LINE L2 0 3272 3187 1009 295 103 49 chr17 14410471 14411047 -71027433 + L2 LINE L2 2079 2622 -691 2222 72 0 56 chr17 14411047 14411368 -71027112 + AluY SINE Alu 1 303 -8 1009 295 103 49 chr17 14411368 14411909 -71026571 + L2 LINE L2 2622 3300 -13 281 341 9 33 chr17 14411954 14412168 -71026312 + L1MB4 LINE L1 14 222 -6320 2598 213 38 55 chr17 14412458 14413604 -71024876 + L1MB4 LINE L1 583 1692 -4862 6208 202 50 38 chr17 14413607 14413832 -71024648 + L1MB4 LINE L1 1826 2047 -4631 2045 130 0 0 chr17 14413832 14414133 -71024347 + AluSc SINE Alu 1 301 -8 6208 202 50 38 chr17 14414133 14417281 -71021199 + L1MB4 LINE L1 2047 5969 -709 2055 119 0 3 chr17 14417281 14417574 -71020906 - AluSq SINE Alu -21 292 1 6208 202 50 38 chr17 14417574 14418294 -71020186 + L1MB4 LINE L1 5969 6678 0 1264 207 52 83 chr17 14419513 14419966 -71018514 + MLT1C LTR MaLR 16 467 0 292 235 163 0 chr17 14421174 14421272 -71017208 + MLT1D LTR MaLR 1 114 -391 1963 152 101 29 chr17 14421345 14421720 -71016760 - MSTB LTR MaLR -24 402 1 2030 112 0 0 chr17 14421814 14422092 -71016388 - AluSg SINE Alu -32 278 1 1094 204 56 111 chr17 14422099 14422423 -71016057 + MLT1D LTR MaLR 162 505 0 3102 197 70 85 chr17 14422996 14423868 -71014612 + MER21B LTR ERV1 2 860 -3 280 192 77 92 chr17 14423923 14424053 -71014427 - MIR SINE MIR -110 152 25 1585 195 112 97 chr17 14424926 14424974 -71013506 - MLT2B2 LTR ERVL 0 515 469 207 0 0 0 chr17 14424974 14424997 -71013483 + (TG)n Simple_repeat Simple_repeat 2 24 0 1585 195 112 97 chr17 14424997 14425045 -71013435 - MLT2B2 LTR ERVL -46 469 423 4014 140 24 16 chr17 14425045 14425679 -71012801 - L1PB4 LINE L1 -1 6155 5517 1585 195 112 97 chr17 14425679 14426088 -71012392 - MLT2B2 LTR ERVL -92 423 1 294 194 194 0 chr17 14426387 14426454 -71012026 + MLT2B2 LTR ERVL 28 107 -408 647 253 5 11 chr17 14426455 14426645 -71011835 + L1MA4 LINE L1 6106 6294 -6 984 270 113 21 chr17 14426685 14427118 -71011362 - MLT1K LTR MaLR -3 473 1 1195 158 48 5 chr17 14427254 14427463 -71011017 + MER20 DNA MER1_type 1 218 -1 314 229 83 0 chr17 14428027 14428123 -71010357 - MLT1L LTR MaLR -2 613 510 564 215 22 22 chr17 14428236 14428371 -71010109 - MLT1L LTR MaLR -339 276 142 2102 125 0 3 chr17 14428940 14429243 -71009237 + AluSc SINE Alu 1 302 -7 487 342 30 20 chr17 14429611 14429810 -71008670 + MLT1I LTR MaLR 130 330 -79 2204 118 3 3 chr17 14429879 14430184 -71008296 + AluSg SINE Alu 1 305 -5 278 196 0 0 chr17 14430195 14430241 -71008239 + MLT1I LTR MaLR 358 403 -6 1632 244 86 15 chr17 14430376 14430852 -71007628 + MLT1E LTR MaLR 82 591 -2 2989 268 94 37 chr17 14430897 14431551 -71006929 - L2 LINE L2 -5 3308 2693 2355 110 0 0 chr17 14431551 14431861 -71006619 + AluSx SINE Alu 1 310 -2 2989 268 94 37 chr17 14431861 14432307 -71006173 - L2 LINE L2 -620 2693 2274 1900 96 36 66 chr17 14432307 14432609 -71005871 + AluSq SINE Alu 13 305 -8 2989 268 94 37 chr17 14432609 14432944 -71005536 - L2 LINE L2 -1039 2274 1808 703 204 105 135 chr17 14432944 14433099 -71005381 + MLT1A2 LTR MaLR 7 150 -240 1378 152 122 26 chr17 14433099 14433369 -71005111 + AluJb SINE Alu 1 296 -16 703 204 105 135 chr17 14433369 14433517 -71004963 + MLT1A2 LTR MaLR 150 301 -89 247 250 0 0 chr17 14433519 14433571 -71004909 - L2 LINE L2 -760 2554 2503 536 189 0 0 chr17 14433596 14433686 -71004794 + MLT1A2 LTR MaLR 301 390 0 850 262 49 65 chr17 14433686 14434071 -71004409 - L2 LINE L2 -1495 1819 1441 188 311 49 30 chr17 14434145 14434309 -71004171 - L2 LINE L2 -2144 1170 1004 225 0 0 0 chr17 14435173 14435198 -71003282 + (CA)n Simple_repeat Simple_repeat 1 25 0 2075 144 28 6 chr17 14435605 14435958 -71002522 - MER46B DNA MER2_type 0 236 1 2382 156 117 5 chr17 14436063 14436492 -71001988 - MER61D LTR ERV1 0 501 25 251 172 0 17 chr17 14436463 14436521 -71001959 - LTR28 LTR ERV1 -963 57 1 * 557 293 156 33 chr17 14436612 14436946 -71001534 + L2 LINE L2 2938 3312 -1 313 298 143 30 chr17 14437079 14437247 -71001233 + L1ME4a LINE L1 5319 5505 -657 547 279 107 30 chr17 14437284 14437649 -71000831 + L1ME4a LINE L1 5586 5978 -143 812 229 143 73 chr17 14437725 14438014 -71000466 + HAL1 LINE L1 1979 2247 -260 1513 172 4 0 chr17 14438014 14438252 -71000228 + AluJb SINE Alu 43 281 -31 369 43 0 0 chr17 14438259 14438306 -71000174 + (CA)n Simple_repeat Simple_repeat 2 48 0 812 229 143 73 chr17 14438306 14438498 -70999982 + HAL1 LINE L1 2252 2502 -5 1458 179 6 116 chr17 14438509 14438844 -70999636 + AluJb SINE Alu 1 298 -4 240 254 45 30 chr17 14439325 14439336 -70999144 - L2 LINE L2 -9 3263 3254 2215 109 0 19 chr17 14439336 14439647 -70998833 - AluSc SINE Alu -4 305 1 240 254 45 30 chr17 14439647 14439702 -70998778 - L2 LINE L2 -18 3254 3196 361 331 58 14 chr17 14439870 14440009 -70998471 + MIR SINE MIR 16 160 -102 699 162 176 28 chr17 14440074 14440216 -70998264 + FRAM SINE Alu 1 161 -15 2068 87 69 4 chr17 14440818 14441095 -70997385 + AluSg1 SINE Alu 1 295 -14 314 274 76 61 chr17 14441810 14442007 -70996473 + L1ME2 LINE L1 2 201 -5918 743 288 162 48 chr17 14442093 14443116 -70995364 + L1ME2 LINE L1 385 1625 -865 414 252 99 90 chr17 14443608 14443906 -70994574 + L1ME2 LINE L1 2126 2433 -3696 2917 138 23 19 chr17 14443906 14444378 -70994102 + MER101 LTR ERV1 1 474 0 414 252 99 90 chr17 14444378 14444655 -70993825 + L1ME2 LINE L1 2433 2706 -3423 963 151 0 7 chr17 14444675 14444821 -70993659 + FAM SINE Alu 18 162 -23 21 36 0 0 chr17 14444823 14444851 -70993629 + AT_rich Low_complexity Low_complexity 1 28 0 349 272 142 18 chr17 14444851 14445020 -70993460 + L1ME2 LINE L1 2700 2889 -3240 697 189 65 47 chr17 14445141 14445310 -70993170 + MER63A DNA MER1_type 39 210 0 823 266 94 63 chr17 14445323 14446047 -70992433 + L1ME2 LINE L1 2989 3748 -2381 1209 153 19 14 chr17 14446047 14446262 -70992218 - L1PA16 LINE L1 0 6166 5951 823 266 94 63 chr17 14446262 14446428 -70992052 + L1ME2 LINE L1 3748 3907 -2222 1773 49 0 0 chr17 14446428 14446632 -70991848 + L1PA3 LINE L1 5949 6152 -3 815 155 0 47 chr17 14446789 14446937 -70991543 + FLAM_C SINE Alu 2 142 -1 648 173 8 23 chr17 14447072 14447205 -70991275 + L1ME2 LINE L1 5691 5821 -345 1029 113 0 0 chr17 14447208 14447350 -70991130 + AluSg/x SINE Alu 170 311 -1 859 274 33 21 chr17 14447355 14447687 -70990793 + L1ME2 LINE L1 5828 6163 -1 411 279 212 28 chr17 14447694 14448025 -70990455 + L1ME2 LINE L1 4141 4537 -1592 2500 66 0 0 chr17 14448034 14448336 -70990144 + AluY SINE Alu 1 302 -9 491 264 67 63 chr17 14448340 14448624 -70989856 + L1ME2 LINE L1 5851 6135 -12 606 89 38 0 chr17 14448933 14449012 -70989468 + AluY SINE Alu 2 83 -228 2196 97 24 0 chr17 14449124 14449414 -70989066 + AluSp SINE Alu 1 297 -16 1138 152 18 37 chr17 14449586 14449803 -70988677 - AluSg/x SINE Alu -15 295 83 938 158 33 0 chr17 14449823 14450007 -70988473 - L1MA8 LINE L1 -244 6047 5858 337 299 30 15 chr17 14450148 14450282 -70988198 + LTR37A LTR ERV1 146 281 -145 592 137 11 0 chr17 14451117 14451212 -70987268 - MER83 LTR ERV1 0 448 353 2428 141 37 5 chr17 14451251 14451685 -70986795 + Tigger3b DNA MER2_type 209 656 -575 759 224 13 7 chr17 14451687 14451839 -70986641 - AluJb SINE Alu -12 300 148 1041 255 34 17 chr17 14453757 14454051 -70984429 - MER89-int LTR ERV1 -5142 1659 1361 1595 196 63 9 chr17 14454060 14454391 -70984089 - MLT1A1 LTR MaLR -4 361 13 339 244 0 22 chr17 14454403 14454493 -70983987 - MER89-int LTR ERV1 -5444 1357 1270 1391 183 67 38 chr17 14456580 14457175 -70981305 + L1MDa LINE L1 2350 2960 -3580 1709 241 107 44 chr17 14457177 14457879 -70980601 + L1MDa LINE L1 3372 4117 -2423 2717 175 26 16 chr17 14457909 14458228 -70980252 + Tigger7 DNA MER2_type 17 331 -2156 2467 136 5 19 chr17 14458228 14458596 -70979884 + THE1B LTR MaLR 1 363 -1 2717 175 26 16 chr17 14458596 14458752 -70979728 + Tigger7 DNA MER2_type 331 500 -1987 2286 110 0 7 chr17 14458752 14459062 -70979418 + AluSc SINE Alu 1 308 -1 2717 175 26 16 chr17 14459062 14459081 -70979399 + Tigger7 DNA MER2_type 500 517 -1970 296 336 8 0 chr17 14459351 14459473 -70979007 - MER20B DNA MER1_type -628 155 33 189 370 50 10 chr17 14461063 14461158 -70977322 + MIR SINE MIR 50 149 -109 2167 105 0 52 chr17 14461158 14461482 -70976998 + AluSx SINE Alu 1 307 -5 2048 119 3 14 chr17 14461939 14462233 -70976247 + AluSc SINE Alu 1 291 -18 225 348 22 0 chr17 14464328 14464417 -70974063 - L2 LINE L2 0 3313 3223 230 398 11 0 chr17 14464519 14464612 -70973868 - L2 LINE L2 -3107 207 114 471 288 36 36 chr17 14465245 14465467 -70973013 + L1MC4a LINE L1 6441 6662 -1146 692 230 132 62 chr17 14465486 14465678 -70972802 + MLT1K LTR MaLR 290 506 -82 2137 99 44 3 chr17 14465678 14465972 -70972508 - AluSc SINE Alu -3 306 1 692 230 132 62 chr17 14465972 14466036 -70972444 + MLT1K LTR MaLR 506 564 -24 1582 275 128 36 chr17 14466162 14467136 -70971344 - L2 LINE L2 -3 3310 2256 1934 224 45 25 chr17 14467304 14467665 -70970815 + Charlie1b DNA MER1_type 1 376 -2385 2196 101 0 14 chr17 14467665 14467961 -70970519 - AluSx SINE Alu -16 296 5 1934 224 45 25 chr17 14467961 14468108 -70970372 + Charlie1b DNA MER1_type 376 519 -4 2094 126 0 0 chr17 14469005 14469298 -70969182 + AluSx SINE Alu 1 293 -19 2311 122 0 0 chr17 14469611 14469922 -70968558 + AluSq SINE Alu 1 311 -2 277 241 5 151 chr17 14470047 14470246 -70968234 + L1ME4a LINE L1 5546 5715 -406 899 282 115 6 chr17 14470692 14471032 -70967448 + L1MC4 LINE L1 6690 7066 -976 291 267 133 15 chr17 14471286 14471421 -70967059 + L1ME4a LINE L1 5966 6116 -5 1014 241 92 15 chr17 14471761 14472097 -70966383 - MARNA DNA Mariner -148 438 77 231 310 76 44 chr17 14473472 14473630 -70964850 - L2 LINE L2 -190 3082 2920 228 195 0 0 chr17 14473637 14473678 -70964802 - L2 LINE L2 -16 3297 3257 383 208 0 13 chr17 14475098 14475175 -70963305 + L2 LINE L2 3206 3281 -32 441 261 22 15 chr17 14475258 14475392 -70963088 + MLT1K LTR MaLR 454 588 0 291 339 90 16 chr17 14476218 14476540 -70961940 + L2 LINE L2 2632 2977 -337 282 292 109 15 chr17 14478126 14478328 -70960152 - L2 LINE L2 -49 3264 3044 722 277 123 42 chr17 14478594 14478775 -70959705 - L2 LINE L2 -1 3312 3147 1884 70 25 0 chr17 14478775 14479016 -70959464 + AluSg/x SINE Alu 66 312 0 722 277 123 42 chr17 14479016 14479496 -70958984 - L2 LINE L2 -166 3147 2544 2122 185 65 7 chr17 14479844 14480260 -70958220 + Tigger7 DNA MER2_type 1 440 -2047 1327 191 70 30 chr17 14480260 14480631 -70957849 + L1MA7 LINE L1 5906 6291 0 22 0 0 0 chr17 14482053 14482075 -70956405 + AT_rich Low_complexity Low_complexity 1 22 0 295 232 61 0 chr17 14482900 14482999 -70955481 - MER20B DNA MER1_type -626 157 53 377 298 81 86 chr17 14483833 14484192 -70954288 - L2 LINE L2 -11 3261 2905 1557 165 4 23 chr17 14484346 14484607 -70953873 - AluJo SINE Alu -56 256 1 216 264 0 0 chr17 14484673 14484726 -70953754 + (TG)n Simple_repeat Simple_repeat 2 54 0 345 353 61 19 chr17 14484767 14485127 -70953353 - L2 LINE L2 -635 2679 2305 33 56 0 0 chr17 14486152 14486206 -70952274 + AT_rich Low_complexity Low_complexity 1 54 0 214 311 78 0 chr17 14486441 14486544 -70951936 - L2 LINE L2 -234 3079 2969 180 298 0 0 chr17 14486773 14486830 -70951650 - L2 LINE L2 -957 2357 2301 193 246 70 0 chr17 14486870 14486927 -70951553 - MIR SINE MIR -77 185 125 1078 167 61 10 chr17 14487005 14487203 -70951277 + AluJo SINE Alu 92 299 -13 375 237 0 13 chr17 14488481 14488557 -70949923 - L2 LINE L2 -191 3081 3007 319 151 0 0 chr17 14490615 14490668 -70947812 + L2 LINE L2 3261 3313 0 191 216 0 62 chr17 14492900 14492997 -70945483 + L2 LINE L2 2888 2978 -294 1096 183 5 0 chr17 14493575 14493761 -70944719 + MER5A DNA MER1_type 3 189 0 882 216 50 0 chr17 14493868 14494067 -70944413 + MER3 DNA MER1_type 1 209 0 2449 61 0 3 chr17 14494702 14494995 -70943485 + AluSc SINE Alu 1 292 -17 449 293 79 13 chr17 14496025 14496254 -70942226 - MIR SINE MIR -17 245 2 8800 101 18 23 chr17 14499693 14501001 -70937479 + HSMAR2 DNA Mariner 1 1301 -1 189 107 0 0 chr17 14501305 14501333 -70937147 + (A)n Simple_repeat Simple_repeat 1 28 0 978 279 33 42 chr17 14501897 14502355 -70936125 - L1ME4a LINE L1 -182 5939 5486 196 220 20 20 chr17 14502476 14502526 -70935954 - MIR SINE MIR -62 146 97 410 302 69 35 chr17 14502792 14503080 -70935400 - L2 LINE L2 -72 3200 2903 26 64 0 0 chr17 14504241 14504288 -70934192 + AT_rich Low_complexity Low_complexity 1 47 0 324 103 138 0 chr17 14504479 14504537 -70933943 + MER5A DNA MER1_type 4 69 -120 365 323 62 0 chr17 14505053 14505183 -70933297 + MIR3 SINE MIR 2 139 -69 441 223 108 57 chr17 14505282 14505439 -70933041 + MIR SINE MIR 70 234 -28 198 0 0 0 chr17 14505448 14505470 -70933010 + (TTCA)n Simple_repeat Simple_repeat 3 24 0 193 240 20 0 chr17 14505491 14505541 -70932939 - L2 LINE L2 -44 3269 3219 21 36 0 0 chr17 14506994 14507022 -70931458 + AT_rich Low_complexity Low_complexity 1 28 0 423 0 0 0 chr17 14507120 14507167 -70931313 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 430 229 12 0 chr17 14507196 14507279 -70931201 - 7SLRNA srpRNA srpRNA -236 84 1 21 0 0 0 chr17 14507292 14507313 -70931167 + AT_rich Low_complexity Low_complexity 1 21 0 953 112 17 17 chr17 14507528 14507706 -70930774 + (TTTC)n Simple_repeat Simple_repeat 1 178 0 1440 190 95 0 chr17 14507708 14507971 -70930509 - AluJo SINE Alu -24 288 1 277 192 144 29 chr17 14508740 14508844 -70929636 + L1MC4 LINE L1 7927 8042 0 331 270 65 100 chr17 14509268 14509527 -70928953 + HAL1 LINE L1 782 1048 -1459 1857 102 14 53 chr17 14509527 14509669 -70928811 + AluSp SINE Alu 2 129 -184 2352 71 16 16 chr17 14509669 14509978 -70928502 + AluSp SINE Alu 1 309 -4 1857 102 14 53 chr17 14509978 14510119 -70928361 + AluSp SINE Alu 129 274 -39 331 270 65 100 chr17 14510119 14510441 -70928039 + HAL1 LINE L1 1048 1343 -1164 693 270 39 80 chr17 14511167 14511556 -70926924 + L1ME4a LINE L1 5661 6033 -88 339 65 0 0 chr17 14511561 14511607 -70926873 + (TTTA)n Simple_repeat Simple_repeat 2 47 0 2302 105 3 0 chr17 14511640 14511945 -70926535 - AluSp SINE Alu -7 306 1 423 319 24 43 chr17 14513365 14513471 -70925009 + MIR SINE MIR 55 157 -105 2505 129 95 5 chr17 14513471 14513914 -70924566 + L1MA9 LINE L1 5830 6312 0 423 319 24 43 chr17 14513914 14514017 -70924463 + MIR SINE MIR 157 260 -2 208 205 0 0 chr17 14514105 14514144 -70924336 - MIR SINE MIR -138 70 32 2135 113 0 7 chr17 14514458 14514809 -70923671 - AluSg SINE Alu 0 310 1 21 0 0 0 chr17 14515094 14515115 -70923365 + AT_rich Low_complexity Low_complexity 1 21 0 193 56 28 28 chr17 14515184 14515220 -70923260 + (CATATA)n Simple_repeat Simple_repeat 1 36 0 193 208 21 21 chr17 14515269 14515317 -70923163 - L2 LINE L2 -2 3270 3223 426 177 0 0 chr17 14515541 14515620 -70922860 - AluJ/FRAM SINE Alu -15 297 219 212 174 38 98 chr17 14515632 14515764 -70922716 + (ATATG)n Simple_repeat Simple_repeat 5 128 0 406 144 17 56 chr17 14515764 14515944 -70922536 + (TATG)n Simple_repeat Simple_repeat 3 175 0 256 97 97 10 chr17 14516018 14516121 -70922359 + (TA)n Simple_repeat Simple_repeat 1 112 0 402 132 84 24 chr17 14516163 14516546 -70921934 + (TA)n Simple_repeat Simple_repeat 1 406 0 2820 19 0 0 chr17 14516782 14517089 -70921391 - AluYb8 SINE Alu -11 307 1 2095 114 0 0 chr17 14517634 14517957 -70920523 + AluSc SINE Alu 1 323 0 1182 166 9 19 chr17 14518170 14518381 -70920099 - AluJo SINE Alu -20 292 84 343 325 110 7 chr17 14519705 14519859 -70918621 + L3 LINE CR1 1302 1471 -106 195 341 78 23 chr17 14519984 14520113 -70918367 + MIR3 SINE MIR 15 150 -58 398 339 27 22 chr17 14520228 14520411 -70918069 - MIR3 SINE MIR -21 187 4 192 289 58 41 chr17 14520468 14520589 -70917891 - L2 LINE L2 -17 3255 3133 210 270 0 27 chr17 14521189 14521263 -70917217 + MIR SINE MIR 90 161 -101 225 65 0 0 chr17 14521638 14521669 -70916811 + (TG)n Simple_repeat Simple_repeat 2 32 0 24 0 0 0 chr17 14521744 14521768 -70916712 + AT_rich Low_complexity Low_complexity 1 24 0 2479 57 10 3 chr17 14521768 14522068 -70916412 - AluY SINE Alu -7 304 3 2192 125 3 6 chr17 14522407 14522719 -70915761 + AluSx SINE Alu 1 311 -1 226 245 0 39 chr17 14522916 14523018 -70915462 + GA-rich Low_complexity Low_complexity 3 100 0 547 328 36 41 chr17 14523544 14523907 -70914573 - L2 LINE L2 -601 2713 2353 690 180 31 0 chr17 14523932 14524060 -70914420 + MER20 DNA MER1_type 70 201 -18 2195 118 0 3 chr17 14524061 14524358 -70914122 + AluSg SINE Alu 1 296 -14 21 36 0 0 chr17 14524457 14524485 -70913995 + AT_rich Low_complexity Low_complexity 1 28 0 2375 146 33 15 chr17 14524497 14524956 -70913524 - L1MA8 LINE L1 -22 6269 5803 930 352 56 43 chr17 14524967 14525732 -70912748 - L2 LINE L2 -1638 1676 898 2127 145 0 3 chr17 14525732 14526042 -70912438 + AluSx SINE Alu 1 309 -3 930 352 56 43 chr17 14526042 14526113 -70912367 - L2 LINE L2 -2416 898 829 213 108 0 0 chr17 14526215 14526252 -70912228 + (T)n Simple_repeat Simple_repeat 1 37 0 380 338 29 15 chr17 14526643 14526847 -70911633 - HAL1b LINE L1 -781 567 361 273 189 0 27 chr17 14527007 14527081 -70911399 + (TAA)n Simple_repeat Simple_repeat 2 73 0 433 248 0 0 chr17 14527545 14527646 -70910834 - MIR SINE MIR -6 256 156 540 246 29 29 chr17 14528554 14528692 -70909788 + L2 LINE L2 2009 2146 -1168 2466 159 21 21 chr17 14528746 14529179 -70909301 - Tigger2a DNA MER2_type 0 434 2 421 264 116 36 chr17 14529279 14529529 -70908951 + MARNA DNA Mariner 174 443 -143 822 163 67 161 chr17 14529827 14530188 -70908292 + MER57A LTR ERV1 77 403 0 437 279 35 35 chr17 14530194 14530366 -70908114 + MER57A-int LTR ERV1 6 177 -7360 586 183 0 35 chr17 14531349 14531574 -70906906 + L1PB4 LINE L1 6029 6249 0 720 115 34 33 chr17 14531464 14531898 -70906582 + GA-rich Low_complexity Low_complexity 1 434 0 1124 176 116 12 chr17 14531941 14532277 -70906203 + MER57A-int LTR ERV1 1078 1448 -3488 2570 49 0 0 chr17 14532489 14532793 -70905687 - AluY SINE Alu -7 304 1 390 161 86 43 chr17 14532934 14533027 -70905453 + MER34 LTR ERV1 141 237 -305 307 206 0 15 chr17 14533027 14533095 -70905385 + MER34 LTR ERV1 476 542 0 2261 100 13 7 chr17 14533193 14533503 -70904977 + AluSx SINE Alu 1 312 0 2000 224 64 84 chr17 14533541 14534613 -70903867 + MER57A-int LTR ERV1 1997 3047 -1889 2357 192 22 53 chr17 14534615 14534983 -70903497 + MER57-int LTR ERV1 5201 5542 -1995 2530 65 3 0 chr17 14534983 14535293 -70903187 + AluY SINE Alu 1 311 0 2357 192 22 53 chr17 14535293 14535565 -70902915 + MER57-int LTR ERV1 5542 5821 -1716 1157 257 34 68 chr17 14535721 14536296 -70902184 + MER57-int LTR ERV1 2450 6387 -1361 736 291 57 47 chr17 14536769 14537590 -70900890 + MER57-int LTR ERV1 6256 7147 -390 445 217 55 132 chr17 14537633 14537647 -70900833 + MER57A LTR ERV1 67 81 -322 2330 108 19 35 chr17 14537647 14538017 -70900463 + THE1B LTR MaLR 1 364 0 445 217 55 132 chr17 14538017 14538376 -70900104 + MER57A LTR ERV1 81 385 -18 190 344 52 31 chr17 14538470 14538566 -70899914 + MIR SINE MIR 63 160 -102 281 233 70 0 chr17 14539648 14539734 -70898746 + MIR SINE MIR 157 248 -14 237 244 0 110 chr17 14539784 14539866 -70898614 + MIR3 SINE MIR 10 83 -125 396 328 93 34 chr17 14540196 14540464 -70898016 + L1MC/D LINE L1 4771 5054 -1092 259 259 86 22 chr17 14540697 14540836 -70897644 + L1MC/D LINE L1 5318 5465 -2343 356 191 0 0 chr17 14541022 14541085 -70897395 + L1PB2 LINE L1 5718 5780 -371 359 165 10 29 chr17 14541099 14541202 -70897278 + (TA)n Simple_repeat Simple_repeat 1 101 0 2041 111 105 3 chr17 14541219 14541551 -70896929 + L1PB2 LINE L1 5783 6148 -3 2353 80 0 29 chr17 14541568 14541882 -70896598 + AluY SINE Alu 1 305 -6 207 283 159 35 chr17 14541937 14542050 -70896430 - MIR3 SINE MIR -47 161 35 253 349 92 46 chr17 14542344 14542496 -70895984 + MIR SINE MIR 38 196 -66 975 128 0 0 chr17 14542732 14542873 -70895607 + AluSg/x SINE Alu 170 310 0 380 195 13 13 chr17 14543163 14543240 -70895240 + MIR SINE MIR 54 130 -78 329 235 0 51 chr17 14543424 14543522 -70894958 + MER103 DNA DNA 54 146 -20 379 309 14 29 chr17 14543724 14543863 -70894617 + LTR33 LTR ERVL 103 239 -282 1682 158 51 46 chr17 14543870 14544243 -70894237 - THE1C LTR MaLR 0 375 1 9042 132 40 34 chr17 14544243 14545812 -70892668 - THE1C-int LTR MaLR 0 1580 3 1677 178 52 25 chr17 14545814 14546179 -70892301 - THE1C LTR MaLR 0 375 1 1094 234 105 47 chr17 14546242 14546486 -70891994 + Charlie4a DNA MER1_type 28 256 -1705 2173 124 3 0 chr17 14546486 14546792 -70891688 + AluSq SINE Alu 1 307 -6 1094 234 105 47 chr17 14546792 14546995 -70891485 + Charlie4a DNA MER1_type 256 501 -7 719 154 70 32 chr17 14547005 14547062 -70891418 + L1MB3 LINE L1 5328 5381 -797 231 88 0 0 chr17 14547062 14547096 -70891384 + (CA)n Simple_repeat Simple_repeat 2 35 0 719 154 70 32 chr17 14547096 14547194 -70891286 + L1MB3 LINE L1 5381 5489 -689 720 188 8 0 chr17 14547194 14547322 -70891158 + AluSq/x SINE Alu 1 129 -184 2158 99 27 3 chr17 14547803 14548117 -70890363 + AluSp SINE Alu 1 313 0 219 257 14 14 chr17 14548189 14548263 -70890217 + GA-rich Low_complexity Low_complexity 2 75 0 2467 181 43 2 chr17 14548350 14548858 -70889622 + L1MB3 LINE L1 5652 6180 -3 23 0 0 0 chr17 14548858 14548881 -70889599 + AT_rich Low_complexity Low_complexity 1 23 0 971 74 0 0 chr17 14549031 14549152 -70889328 + AluSc SINE Alu 180 300 -9 351 0 0 0 chr17 14549440 14549479 -70889001 + (CA)n Simple_repeat Simple_repeat 2 40 0 248 269 211 10 chr17 14549652 14549756 -70888724 - L2 LINE L2 -2 3270 3146 505 86 49 0 chr17 14549939 14550020 -70888460 + L1MB3 LINE L1 5884 5968 -215 195 162 0 0 chr17 14550118 14550155 -70888325 + (TTA)n Simple_repeat Simple_repeat 1 37 0 225 0 0 0 chr17 14550220 14550245 -70888235 + (CA)n Simple_repeat Simple_repeat 1 25 0 691 198 6 64 chr17 14550268 14550331 -70888149 - MIR SINE MIR -100 162 97 2217 87 35 3 chr17 14550331 14550620 -70887860 + AluSc SINE Alu 1 298 -11 691 198 6 64 chr17 14550620 14550713 -70887767 - MIR SINE MIR -165 97 15 304 307 13 0 chr17 14550896 14550971 -70887509 - MER5C DNA MER1_type -248 76 1 277 304 294 0 chr17 14551716 14551900 -70886580 + MIR SINE MIR 1 238 -24 330 263 0 0 chr17 14552010 14552143 -70886337 + (CCA)n Simple_repeat Simple_repeat 2 134 0 530 209 7 0 chr17 14552179 14552318 -70886162 + (CCA)n Simple_repeat Simple_repeat 2 141 0 459 330 66 19 chr17 14552707 14552919 -70885561 + MIR SINE MIR 25 246 -16 584 249 5 85 chr17 14552982 14553183 -70885297 - MER5A DNA MER1_type -2 187 3 2413 72 0 0 chr17 14553285 14553578 -70884902 + AluSc SINE Alu 1 293 -16 245 348 83 20 chr17 14553805 14554058 -70884422 + LTR16C LTR ERVL 155 423 -68 4584 173 51 23 chr17 14554069 14555563 -70882917 - L1MA5 LINE L1 0 7719 6180 207 69 0 0 chr17 14555563 14555592 -70882888 + (TTTG)n Simple_repeat Simple_repeat 1 29 0 2431 233 60 70 chr17 14555592 14556542 -70881938 - L1MA5 LINE L1 -4637 2928 1989 364 273 153 38 chr17 14556626 14556809 -70881671 + MIR SINE MIR 56 259 -3 2762 160 12 36 chr17 14558137 14558640 -70879840 + L1MB4 LINE L1 5632 6122 -58 2377 88 0 0 chr17 14558640 14558936 -70879544 + AluSq SINE Alu 1 296 -17 2762 160 12 36 chr17 14558936 14558994 -70879486 + L1MB4 LINE L1 6122 6180 0 206 129 0 0 chr17 14559121 14559152 -70879328 + L2 LINE L2 3263 3293 -20 195 129 0 0 chr17 14559249 14559280 -70879200 + (T)n Simple_repeat Simple_repeat 1 31 0 2146 109 7 3 chr17 14561035 14561329 -70877151 + AluSg SINE Alu 1 295 -15 840 318 30 17 chr17 14561624 14562027 -70876453 + L1MC4a LINE L1 5518 5925 -1883 25 31 0 0 chr17 14562218 14562250 -70876230 + AT_rich Low_complexity Low_complexity 1 32 0 236 30 30 0 chr17 14562321 14562354 -70876126 + (TCTA)n Simple_repeat Simple_repeat 2 35 0 2307 96 3 0 chr17 14562681 14562982 -70875498 - AluSp SINE Alu -11 302 1 2124 110 3 47 chr17 14563474 14563792 -70874688 + AluSx SINE Alu 1 304 -8 394 187 310 0 chr17 14563839 14563994 -70874486 - L2 LINE L2 0 3313 3111 1735 153 34 20 chr17 14564665 14564959 -70873521 + AluJo SINE Alu 2 299 -13 286 271 83 15 chr17 14565267 14565400 -70873080 - HAL1b LINE L1 -983 365 224 564 289 70 10 chr17 14566661 14566862 -70871618 + MIR SINE MIR 25 237 -25 2184 110 0 10 chr17 14567019 14567319 -70871161 + AluSq SINE Alu 1 297 -16 1476 145 121 0 chr17 14567822 14568104 -70870376 + L1MB3 LINE L1 5866 6181 -2 503 291 66 92 chr17 14568688 14568874 -70869606 + L1ME4a LINE L1 5516 5705 -416 2056 148 0 13 chr17 14568874 14569185 -70869295 + AluSx SINE Alu 1 307 -5 503 291 66 92 chr17 14569185 14569199 -70869281 + L1ME4a LINE L1 5705 5718 -403 1878 174 6 13 chr17 14569199 14569510 -70868970 + AluJb SINE Alu 1 309 -3 503 291 66 92 chr17 14569510 14569569 -70868911 + L1ME4a LINE L1 5718 5777 -344 2256 108 0 13 chr17 14569569 14569876 -70868604 + AluSg SINE Alu 1 303 -7 503 291 66 92 chr17 14569876 14570103 -70868377 + L1ME4a LINE L1 5777 5990 -131 2480 59 0 0 chr17 14570103 14570407 -70868073 + AluY SINE Alu 2 305 -6 503 291 66 92 chr17 14570407 14570481 -70867999 + L1ME4a LINE L1 5990 6064 -57 251 315 11 11 chr17 14570602 14570691 -70867789 + Charlie1 DNA MER1_type 1 89 -2672 2089 168 70 17 chr17 14570711 14571182 -70867298 + Charlie1 DNA MER1_type 1783 2278 -483 2716 148 49 10 chr17 14571182 14571361 -70867119 + L1MB3 LINE L1 5573 5744 -439 234 62 0 0 chr17 14571361 14571393 -70867087 + (TGAA)n Simple_repeat Simple_repeat 1 32 0 2716 148 49 10 chr17 14571393 14571727 -70866753 + L1MB3 LINE L1 5744 6106 -77 1973 102 10 33 chr17 14571740 14572044 -70866436 + AluSc SINE Alu 1 297 -12 202 143 29 0 chr17 14572048 14572083 -70866397 + GA-rich Low_complexity Low_complexity 1 36 0 264 122 0 0 chr17 14572084 14572125 -70866355 + (GGGA)n Simple_repeat Simple_repeat 2 42 0 2076 173 21 21 chr17 14572147 14572621 -70865859 + Charlie1 DNA MER1_type 2272 2745 -16 227 184 0 0 chr17 14572633 14572671 -70865809 + L2 LINE L2 3269 3306 -7 1142 266 61 18 chr17 14573480 14573874 -70864606 + LTR16C LTR ERVL 80 490 -1 612 238 60 24 chr17 14575046 14575214 -70863266 + FAM SINE Alu 1 174 -1 2308 93 33 0 chr17 14575439 14575741 -70862739 + AluSx SINE Alu 1 312 0 25 0 0 0 chr17 14575864 14575889 -70862591 + AT_rich Low_complexity Low_complexity 1 25 0 2277 113 3 10 chr17 14575945 14576255 -70862225 + AluSx SINE Alu 2 309 -3 2442 85 0 3 chr17 14576421 14576727 -70861753 + AluY SINE Alu 1 305 -6 605 298 70 26 chr17 14576792 14577178 -70861302 + L1ME4a LINE L1 5562 5964 -157 232 216 0 0 chr17 14577155 14577206 -70861274 - L1MC4 LINE L1 -1339 6703 6653 * 273 57 0 0 chr17 14577219 14577254 -70861226 + (TG)n Simple_repeat Simple_repeat 1 35 0 255 247 99 25 chr17 14577700 14577781 -70860699 + L2 LINE L2 3165 3251 -21 464 274 7 7 chr17 14578060 14578206 -70860274 + LTR16C LTR ERVL 345 490 -1 2303 105 3 0 chr17 14578223 14578529 -70859951 - AluSx SINE Alu -5 307 1 800 228 33 0 chr17 14579496 14579676 -70858804 + L1MB2 LINE L1 5640 5825 -346 1787 132 3 47 chr17 14579676 14579994 -70858486 + AluJo SINE Alu 1 305 0 2389 132 16 24 chr17 14580363 14580741 -70857739 + THE1C LTR MaLR 1 375 0 389 297 84 19 chr17 14580752 14580907 -70857573 + MIR3 SINE MIR 31 195 -13 2700 139 7 19 chr17 14581493 14581909 -70856571 + MSTC LTR MaLR 1 411 -17 431 365 75 11 chr17 14582062 14582328 -70856152 - L2 LINE L2 -348 2966 2684 1398 128 0 15 chr17 14582513 14582717 -70855763 - AluSg/x SINE Alu -14 296 96 2301 96 3 0 chr17 14583037 14583330 -70855150 + AluSg SINE Alu 1 294 -16 386 266 55 0 chr17 14583355 14583483 -70854997 + L1ME4a LINE L1 5695 5829 -292 509 254 61 87 chr17 14583519 14583596 -70854884 + L1ME4a LINE L1 5815 5892 -229 2186 120 0 7 chr17 14583596 14583904 -70854576 + AluSg SINE Alu 1 306 -4 509 254 61 87 chr17 14583904 14584137 -70854343 + L1ME4a LINE L1 5892 6117 -4 24 0 0 0 chr17 14584576 14584600 -70853880 + AT_rich Low_complexity Low_complexity 1 24 0 342 138 0 0 chr17 14584690 14584748 -70853732 + (GGGGA)n Simple_repeat Simple_repeat 4 61 0 1709 68 12 92 chr17 14584748 14584998 -70853482 + MER30 DNA MER1_type 1 230 0 209 299 17 86 chr17 14585318 14585435 -70853045 + MIR SINE MIR 33 141 -67 507 224 145 22 chr17 14585560 14585739 -70852741 - L2 LINE L2 0 3313 3113 296 248 137 20 chr17 14585744 14585897 -70852583 + L1ME3A LINE L1 5732 5902 -262 1144 183 15 10 chr17 14585904 14586106 -70852374 + AluJo SINE Alu 87 289 -23 312 247 71 0 chr17 14586133 14586218 -70852262 + L1MC4 LINE L1 6615 6705 -1337 285 114 0 0 chr17 14586228 14586272 -70852208 + L1ME3A LINE L1 5910 5953 -217 3152 157 13 50 chr17 14586885 14587037 -70851443 + MLT2B1 LTR ERVL 1 157 -363 1941 96 6 87 chr17 14587037 14587372 -70851108 + AluSp SINE Alu 1 308 -5 3152 157 13 50 chr17 14587372 14587759 -70850721 + MLT2B1 LTR ERVL 157 520 0 445 360 40 9 chr17 14588814 14589039 -70849441 - MIR SINE MIR -6 256 25 1783 93 93 50 chr17 14589061 14589339 -70849141 + AluSg SINE Alu 1 290 -20 1992 212 151 0 chr17 14589741 14590132 -70848348 + MLT2B2 LTR ERVL 5 472 -43 270 0 0 0 chr17 14590132 14590162 -70848318 + (TG)n Simple_repeat Simple_repeat 2 31 0 1992 212 151 0 chr17 14590162 14590214 -70848266 + MLT2B2 LTR ERVL 472 515 0 33 66 0 0 chr17 14590398 14590459 -70848021 + AT_rich Low_complexity Low_complexity 1 61 0 2069 129 0 7 chr17 14590659 14590961 -70847519 - AluSg SINE Alu -10 300 1 224 340 121 14 chr17 14591090 14591305 -70847175 + L2 LINE L2 2468 2705 -609 993 200 71 42 chr17 14591649 14591949 -70846531 + MLT1B LTR MaLR 1 256 -134 309 253 135 39 chr17 14592293 14592471 -70846009 - L2 LINE L2 0 3313 3119 828 239 150 69 chr17 14592527 14593006 -70845474 - MLT1G1 LTR MaLR 0 595 26 1019 325 123 22 chr17 14593102 14593751 -70844729 - L2 LINE L2 -351 2963 2249 2197 80 3 7 chr17 14593804 14594091 -70844389 - AluSg SINE Alu -24 286 1 214 305 226 11 chr17 14594298 14594488 -70843992 + L2 LINE L2 3083 3313 0 2572 63 0 0 chr17 14594816 14595118 -70843362 - AluY SINE Alu -9 302 1 798 296 125 16 chr17 14595313 14595736 -70842744 + Tigger8 DNA MER2_type 198 666 0 665 200 200 0 chr17 14595946 14596101 -70842379 - MER5A DNA MER1_type -2 187 2 438 301 0 48 chr17 14596108 14596232 -70842248 - MER5B DNA MER1_type -1 177 63 1669 170 24 0 chr17 14596232 14596526 -70841954 - AluJb SINE Alu -11 301 1 438 301 0 48 chr17 14596526 14596587 -70841893 - MER5B DNA MER1_type -115 63 1 2204 82 20 17 chr17 14596624 14596917 -70841563 + AluSp SINE Alu 2 295 -18 430 256 134 73 chr17 14597229 14597705 -70840775 - MER113 DNA MER1_type? -2 519 15 360 0 0 0 chr17 14598129 14598169 -70840311 + (TG)n Simple_repeat Simple_repeat 1 40 0 389 264 72 82 chr17 14601318 14601610 -70836870 + L1ME3A LINE L1 758 1046 -5159 371 281 0 89 chr17 14601610 14601756 -70836724 + L2 LINE L2 3181 3313 0 433 284 41 41 chr17 14601763 14602006 -70836474 + L1ME3A LINE L1 1047 1289 -4916 347 269 63 6 chr17 14602001 14602176 -70836304 + L1ME3A LINE L1 5326 5510 -2344 * 566 208 0 0 chr17 14602182 14602278 -70836202 + FLAM_A SINE Alu 6 101 -41 617 311 81 28 chr17 14602300 14602734 -70835746 + L1ME3A LINE L1 5497 5953 -286 22 56 0 0 chr17 14603019 14603055 -70835425 + AT_rich Low_complexity Low_complexity 1 36 0 238 238 48 12 chr17 14603055 14603139 -70835341 + HAL1 LINE L1 1602 1688 -819 302 247 129 87 chr17 14603520 14603749 -70834731 + L1MEd LINE L1 2111 2356 -4040 876 142 8 15 chr17 14603749 14603883 -70834597 + FLAM_C SINE Alu 1 133 0 302 247 129 87 chr17 14603883 14603940 -70834540 + L1MEd LINE L1 2356 2409 -3987 204 237 17 51 chr17 14603997 14604115 -70834365 + A-rich Low_complexity Low_complexity 2 115 0 709 216 9 0 chr17 14604194 14604343 -70834137 - FLAM_A SINE Alu 0 150 1 378 230 58 43 chr17 14604409 14604548 -70833932 - L1ME LINE L1 -317 5804 5664 2076 128 0 7 chr17 14605219 14605517 -70832963 + AluSg SINE Alu 1 296 -14 217 338 44 50 chr17 14606303 14606463 -70832017 + L2 LINE L2 3058 3216 -56 1948 174 58 0 chr17 14607102 14607447 -70831033 - MLT1A1 LTR MaLR 0 365 1 1806 214 118 16 chr17 14608729 14609464 -70829016 - L1ME1 LINE L1 -3 6163 5312 228 320 74 42 chr17 14609472 14609642 -70828838 + MIR3 SINE MIR 8 184 -24 242 324 169 7 chr17 14609719 14609855 -70828625 - MIR3 SINE MIR -13 195 38 2364 80 0 0 chr17 14611046 14611332 -70827148 + AluSc SINE Alu 1 286 -23 950 254 48 121 chr17 14611460 14612082 -70826398 + L2 LINE L2 2729 3313 0 2232 91 0 10 chr17 14612089 14612386 -70826094 - AluSq SINE Alu -19 294 1 290 26 26 0 chr17 14612445 14612484 -70825996 + (CATA)n Simple_repeat Simple_repeat 1 40 0 362 215 99 16 chr17 14612558 14612679 -70825801 - LTR67 LTR ERVL -1 556 426 401 338 0 15 chr17 14613179 14613312 -70825168 - MIR SINE MIR -55 207 77 435 272 256 5 chr17 14613346 14613537 -70824943 - MIR SINE MIR -22 240 2 213 94 0 0 chr17 14613688 14613720 -70824760 + (TGAA)n Simple_repeat Simple_repeat 1 32 0 2184 76 23 36 chr17 14614442 14614769 -70823711 + AluSq SINE Alu 1 313 0 184 139 0 28 chr17 14614930 14614966 -70823514 + L2 LINE L2 3264 3298 -15 973 250 70 13 chr17 14616413 14616725 -70821755 - MARNA DNA Mariner -88 498 169 837 276 172 37 chr17 14617063 14617498 -70820982 - MLT1J LTR MaLR -17 494 1 2326 109 0 0 chr17 14618211 14618522 -70819958 - AluY SINE Alu 0 311 1 21 71 0 0 chr17 14619906 14619948 -70818532 + AT_rich Low_complexity Low_complexity 1 42 0 231 339 60 42 chr17 14620238 14620792 -70817688 + L1M4 LINE L1 3340 3903 -2243 444 243 14 142 chr17 14620792 14620852 -70817628 - L2 LINE L2 -5 3308 3242 2099 113 0 14 chr17 14620852 14621144 -70817336 + AluSc SINE Alu 1 288 -21 444 243 14 142 chr17 14621144 14621379 -70817101 - L2 LINE L2 -71 3242 3051 7584 200 50 14 chr17 14621386 14622769 -70815711 + L1MB8 LINE L1 3421 4753 -1425 2266 119 0 0 chr17 14622769 14623064 -70815416 - AluSx SINE Alu -15 297 3 7584 200 50 14 chr17 14623064 14623257 -70815223 + L1MB8 LINE L1 4753 4938 -1240 1364 249 51 33 chr17 14623257 14623646 -70814834 + MSTD LTR MaLR 1 396 0 7584 200 50 14 chr17 14623646 14624730 -70813750 + L1MB8 LINE L1 4938 6178 0 7084 61 2 3 chr17 14624865 14625721 -70812759 + L1PA8 LINE L1 5318 6172 0 342 285 43 31 chr17 14625726 14625982 -70812498 + L1M4 LINE L1 4448 4706 -1440 2279 76 14 3 chr17 14626305 14626593 -70811887 - AluSc SINE Alu -18 291 1 248 276 0 0 chr17 14627090 14627148 -70811332 + L2 LINE L2 3214 3271 -1 1802 137 0 58 chr17 14628195 14628220 -70810260 - AluJo SINE Alu -3 309 284 198 0 0 0 chr17 14628220 14628242 -70810238 + (CAT)n Simple_repeat Simple_repeat 2 23 0 1802 137 0 58 chr17 14628242 14628544 -70809936 - AluJo SINE Alu -28 284 1 421 273 95 50 chr17 14628692 14629065 -70809415 + L2 LINE L2 2722 3077 -236 2130 120 3 0 chr17 14629065 14629357 -70809123 - AluSq SINE Alu -20 293 1 421 273 95 50 chr17 14629357 14629395 -70809085 + L2 LINE L2 3077 3112 -201 204 97 0 0 chr17 14629395 14629426 -70809054 + (TATG)n Simple_repeat Simple_repeat 2 32 0 421 273 95 50 chr17 14629426 14629544 -70808936 + L2 LINE L2 3112 3305 -8 573 197 67 91 chr17 14629928 14630136 -70808344 - MER102a DNA MER1_type -20 310 108 2370 86 3 10 chr17 14630152 14630456 -70808024 - AluSc SINE Alu -6 303 2 2294 251 57 56 chr17 14630818 14630951 -70807529 - L1ME3A LINE L1 -40 6130 5999 2286 116 0 0 chr17 14630951 14631262 -70807218 - AluSp SINE Alu -2 311 1 2294 251 57 56 chr17 14631262 14631661 -70806819 - L1ME3A LINE L1 -171 5999 5602 1375 221 83 94 chr17 14631661 14632040 -70806440 - MER34 LTR ERV1 -4 538 165 2471 80 0 0 chr17 14632040 14632339 -70806141 - AluSx SINE Alu -13 299 1 1375 221 83 94 chr17 14632339 14632503 -70805977 - MER34 LTR ERV1 -377 165 1 2294 251 57 56 chr17 14632503 14633218 -70805262 - L1ME3A LINE L1 -568 5602 4885 647 289 71 68 chr17 14633238 14633632 -70804848 - L3 LINE CR1 -622 955 561 1062 152 6 22 chr17 14634140 14634318 -70804162 - MER58B DNA MER1_type 0 341 167 228 220 121 98 chr17 14635090 14635263 -70803217 + MLT1L LTR MaLR 1 177 -438 306 283 78 39 chr17 14635327 14635507 -70802973 + MLT1L LTR MaLR 205 391 -224 509 290 0 0 chr17 14636183 14636307 -70802173 + MER94 DNA DNA 1 124 -10 1865 176 8 17 chr17 14638293 14638652 -70799828 - L1MB5 LINE L1 -7 6167 5812 7061 69 46 0 chr17 14638659 14639819 -70798661 - L1PA8 LINE L1 0 6172 4991 1356 158 4 23 chr17 14639819 14640085 -70798395 - L1MB5 LINE L1 -347 5827 5567 22 35 0 0 chr17 14640132 14640161 -70798319 + AT_rich Low_complexity Low_complexity 1 29 0 1622 184 39 39 chr17 14641807 14642171 -70796309 + MLT1A1 LTR MaLR 1 364 -1 3798 148 22 53 chr17 14642200 14642937 -70795543 + L1MC1 LINE L1 5615 6328 -5 485 313 129 17 chr17 14642948 14643400 -70795080 + L1ME LINE L1 5319 5820 -301 7384 49 0 1 chr17 14643410 14644452 -70794028 + L1PA7 LINE L1 5112 6152 -2 302 262 73 37 chr17 14645776 14645940 -70792540 - MIR3 SINE MIR -6 202 33 272 255 29 59 chr17 14645969 14646071 -70792409 + MER5A DNA MER1_type 16 114 -75 603 249 50 33 chr17 14646124 14646262 -70792218 - MER5A DNA MER1_type 0 189 46 1568 199 51 14 chr17 14646262 14646614 -70791866 + MLT1A1 LTR MaLR 1 365 0 603 249 50 33 chr17 14646614 14646656 -70791824 - MER5A DNA MER1_type -143 46 6 201 293 158 15 chr17 14647022 14647155 -70791325 - MIR3 SINE MIR -29 179 28 2359 113 105 10 chr17 14647800 14648191 -70790289 + MSTA LTR MaLR 1 428 0 608 189 39 128 chr17 14648630 14648821 -70789659 + HAL1 LINE L1 928 1088 -1419 2113 124 3 0 chr17 14648821 14649119 -70789361 - AluSq SINE Alu -12 301 3 608 189 39 128 chr17 14649119 14649208 -70789272 + HAL1 LINE L1 1088 1183 -1324 441 230 39 34 chr17 14649471 14649649 -70788831 + MER113 DNA MER1_type? 1 179 -342 1470 200 128 19 chr17 14649681 14650041 -70788439 + MLT1F1 LTR MaLR 169 567 0 647 255 53 85 chr17 14650047 14650288 -70788192 + MER113 DNA MER1_type? 209 439 -82 2197 113 3 7 chr17 14650288 14650590 -70787890 - AluSq SINE Alu -7 306 6 647 255 53 85 chr17 14650590 14650666 -70787814 + MER113 DNA MER1_type? 439 516 -5 407 273 35 14 chr17 14650703 14650846 -70787634 + MIR3 SINE MIR 54 199 -9 25 31 0 0 chr17 14651758 14651790 -70786690 + AT_rich Low_complexity Low_complexity 1 32 0 1712 179 23 10 chr17 14651922 14652223 -70786257 + AluJo SINE Alu 1 305 -7 435 337 103 0 chr17 14653293 14653468 -70785012 + MER91A DNA MER1_type 1 193 -3 2435 144 12 27 chr17 14653517 14653919 -70784561 + MSTB LTR MaLR 1 396 -30 2372 84 7 3 chr17 14653919 14654228 -70784252 - AluSx SINE Alu -2 310 1 261 33 0 0 chr17 14654229 14654259 -70784221 + MSTB LTR MaLR 382 411 -17 2356 105 3 3 chr17 14656351 14656657 -70781823 + AluSx SINE Alu 1 306 -6 382 229 12 0 chr17 14656741 14656824 -70781656 + MER5A DNA MER1_type 26 109 -80 233 314 0 0 chr17 14656919 14657005 -70781475 + GA-rich Low_complexity Low_complexity 3 88 0 313 290 30 91 chr17 14657329 14657560 -70780920 + HAL1 LINE L1 1 217 -2290 390 291 33 14 chr17 14657612 14657825 -70780655 + HAL1 LINE L1 1687 1903 -604 1016 271 108 85 chr17 14657914 14658625 -70779855 + HAL1 LINE L1 308 1055 -1452 2161 126 3 3 chr17 14658625 14658934 -70779546 + AluSg SINE Alu 2 310 0 1016 271 108 85 chr17 14658934 14659346 -70779134 + HAL1 LINE L1 1055 1456 -1051 1195 265 21 13 chr17 14659356 14659729 -70778751 + HAL1 LINE L1 1528 1903 -604 1940 137 0 0 chr17 14659767 14660044 -70778436 - AluSx SINE Alu -8 304 28 440 259 130 78 chr17 14660063 14660500 -70777980 + HAL1 LINE L1 2042 2501 -6 435 204 8 15 chr17 14660514 14660646 -70777834 + GA-rich Low_complexity Low_complexity 2 132 0 432 321 67 5 chr17 14661300 14661493 -70776987 + MIR SINE MIR 14 218 -44 2208 103 3 28 chr17 14661514 14661834 -70776646 + AluSp SINE Alu 1 312 -1 339 322 17 40 chr17 14662378 14662555 -70775925 - MIR SINE MIR -70 192 20 206 237 0 88 chr17 14663618 14663732 -70774748 + A-rich Low_complexity Low_complexity 5 108 0 849 210 5 11 chr17 14665065 14665258 -70773222 + MER33 DNA MER1_type 1 185 -88 725 193 77 11 chr17 14665268 14665449 -70773031 + MER33 DNA MER1_type 144 336 -27 504 335 24 5 chr17 14665749 14665961 -70772519 + MIR SINE MIR 9 224 -38 901 139 58 52 chr17 14665982 14666154 -70772326 - MLT2C2 LTR ERVL -40 424 252 623 105 0 0 chr17 14666154 14666240 -70772240 - AluY SINE Alu -15 296 211 1501 138 53 0 chr17 14666240 14666486 -70771994 - MLT2C2 LTR ERVL -205 259 1 342 304 72 56 chr17 14666629 14667043 -70771437 - L2 LINE L2 -10 3303 2883 261 210 0 0 chr17 14667539 14667601 -70770879 + (TG)n Simple_repeat Simple_repeat 1 62 0 2380 93 3 10 chr17 14667936 14668246 -70770234 + AluSx SINE Alu 1 308 -4 867 283 33 39 chr17 14668864 14669284 -70769196 - MLT1K LTR MaLR -27 561 76 524 287 28 0 chr17 14669710 14669853 -70768627 - MER103 DNA DNA -2 164 18 1188 229 77 61 chr17 14669940 14670347 -70768133 + HAL1 LINE L1 1571 1970 -537 198 0 0 0 chr17 14670347 14670369 -70768111 + (TA)n Simple_repeat Simple_repeat 2 23 0 2082 77 0 0 chr17 14670370 14670618 -70767862 - AluY SINE Alu -25 286 39 1188 229 77 61 chr17 14670618 14670718 -70767762 + HAL1 LINE L1 1969 2088 -419 332 324 68 52 chr17 14670776 14671262 -70767218 + MLT1H LTR MaLR 15 549 0 226 189 90 72 chr17 14671262 14671373 -70767107 + HAL1 LINE L1 2191 2303 -204 232 274 0 27 chr17 14671373 14671384 -70767096 + GA-rich Low_complexity Low_complexity 2 12 -60 2638 58 0 7 chr17 14671384 14671694 -70766786 + AluY SINE Alu 1 308 -3 232 274 0 27 chr17 14671694 14671755 -70766725 + GA-rich Low_complexity Low_complexity 12 72 0 360 287 69 76 chr17 14671919 14672077 -70766403 + HAL1 LINE L1 1074 1231 -1276 2419 57 0 10 chr17 14672077 14672376 -70766104 - AluY SINE Alu -15 296 1 360 287 69 76 chr17 14672376 14672492 -70765988 + HAL1 LINE L1 1231 1346 -1161 373 322 71 19 chr17 14672677 14672944 -70765536 + HAL1 LINE L1 1524 1804 -703 411 192 64 16 chr17 14673082 14673207 -70765273 + HAL1 LINE L1 2023 2153 -354 2376 89 0 10 chr17 14673306 14673609 -70764871 - AluSg SINE Alu -9 301 2 515 298 82 20 chr17 14673763 14674055 -70764425 + HAL1 LINE L1 2193 2502 -5 570 280 115 50 chr17 14675751 14675838 -70762642 + MLT1J2 LTR MaLR 69 149 -301 192 97 0 0 chr17 14675838 14675869 -70762611 + (TG)n Simple_repeat Simple_repeat 2 32 0 570 280 115 50 chr17 14675869 14676138 -70762342 + MLT1J2 LTR MaLR 149 448 -2 264 30 0 0 chr17 14676508 14676541 -70761939 + (TG)n Simple_repeat Simple_repeat 2 34 0 389 277 65 26 chr17 14677587 14677742 -70760738 - MLT1L LTR MaLR -6 609 449 2306 107 0 0 chr17 14678573 14678871 -70759609 + AluSc SINE Alu 1 298 -11 2057 79 0 72 chr17 14679389 14679725 -70758755 - AluY SINE Alu 0 314 1 1256 112 28 0 chr17 14680213 14680392 -70758088 - L1PA13 LINE L1 -7 6156 5973 595 81 69 0 chr17 14680392 14680479 -70758001 + L1P4 LINE L1 5513 5605 -558 665 130 0 0 chr17 14680627 14680727 -70757753 + L1P4 LINE L1 5608 5707 -461 2298 94 7 0 chr17 14681296 14681594 -70756886 + AluSx SINE Alu 2 301 -11 2309 113 3 0 chr17 14681594 14681979 -70756501 + AluSp SINE Alu 1 386 0 2487 148 56 2 chr17 14681993 14682406 -70756074 - LTR47A LTR ERVL -17 435 1 4277 152 64 54 chr17 14682413 14683881 -70754599 - LTR49-int LTR ERV1 -687 6071 4569 10024 158 50 21 chr17 14683896 14685287 -70753193 - LTR49-int LTR ERV1 -1905 4853 3504 3795 148 68 42 chr17 14685287 14685994 -70752486 + LTR8A LTR ERV1 3 727 0 10024 158 50 21 chr17 14685994 14686380 -70752100 - LTR49-int LTR ERV1 -3254 3504 3046 2090 107 3 32 chr17 14686380 14686689 -70751791 - AluSp SINE Alu -13 300 1 10024 158 50 21 chr17 14686689 14686795 -70751685 - LTR49-int LTR ERV1 -3712 3046 2945 940 104 8 0 chr17 14686827 14686961 -70751519 - AluSp/q SINE Alu -4 309 175 1449 160 79 49 chr17 14686961 14687458 -70751022 - LTR49-int LTR ERV1 -2770 3561 1181 493 188 0 0 chr17 14687485 14687582 -70750898 - LTR49-int LTR ERV1 -3220 2726 854 * 1056 229 23 36 chr17 14687575 14687883 -70750597 - LTR49-int LTR ERV1 -4060 2271 1984 268 286 32 64 chr17 14687920 14687990 -70750490 - L1M4 LINE L1 -1635 4511 4440 1995 114 4 4 chr17 14687990 14688310 -70750170 - AluSg SINE Alu 0 320 1 268 286 32 64 chr17 14688310 14688358 -70750122 - L1M4 LINE L1 -1706 4440 4392 198 0 0 0 chr17 14688358 14688380 -70750100 + (TG)n Simple_repeat Simple_repeat 2 23 0 268 286 32 64 chr17 14688380 14688479 -70750001 - L1M4 LINE L1 -1754 4392 4299 1011 266 145 18 chr17 14688495 14688894 -70749586 - MLT1J2 LTR MaLR 0 450 1 345 275 60 57 chr17 14689084 14689470 -70749010 - L1M4 LINE L1 -2207 3939 3553 27777 59 3 6 chr17 14689564 14693924 -70744556 - L1PA6 LINE L1 -1 6468 2124 800 157 0 0 chr17 14693922 14694043 -70744437 - L1PA6 LINE L1 -6331 130 10 * 2815 227 67 47 chr17 14694051 14694746 -70743734 - L1ME1 LINE L1 -63 6103 5358 1958 133 0 20 chr17 14694746 14694907 -70743573 - AluY SINE Alu -15 296 142 279 0 0 0 chr17 14694907 14694938 -70743542 + (TA)n Simple_repeat Simple_repeat 2 32 0 1958 133 0 20 chr17 14694938 14695076 -70743404 - AluY SINE Alu -169 142 3 2815 227 67 47 chr17 14695076 14695479 -70743001 - L1ME1 LINE L1 -808 5358 4965 766 238 34 55 chr17 14695499 14695678 -70742802 - MIR SINE MIR -18 244 70 2524 60 3 0 chr17 14695678 14695980 -70742500 + AluY SINE Alu 1 303 -8 766 238 34 55 chr17 14695980 14696035 -70742445 - MIR SINE MIR -192 70 15 354 262 84 5 chr17 14696081 14696295 -70742185 - L1ME1 LINE L1 -2838 3308 3078 273 284 74 78 chr17 14696557 14696828 -70741652 + L1MC4a LINE L1 6530 6799 -1009 293 331 28 48 chr17 14698299 14698444 -70740036 + L2 LINE L2 2909 3050 -222 1678 148 7 14 chr17 14698524 14698808 -70739672 + Tigger2 DNA MER2_type 1 282 -2436 765 162 8 0 chr17 14698809 14698926 -70739554 + AluSq/x SINE Alu 2 119 -194 2732 162 32 4 chr17 14698954 14699418 -70739062 + Tigger2 DNA MER2_type 268 744 -1974 1161 148 22 0 chr17 14699539 14699722 -70738758 - MER50 LTR ERV1 -12 722 536 1290 101 11 0 chr17 14699740 14699919 -70738561 - AluSg/x SINE Alu 0 310 130 3080 153 24 22 chr17 14699920 14700471 -70738009 - MER50 LTR ERV1 -182 552 1 1617 157 4 15 chr17 14700496 14700757 -70737723 + Tigger2 DNA MER2_type 2451 2708 -10 273 103 0 0 chr17 14701119 14701158 -70737322 + (TCCC)n Simple_repeat Simple_repeat 4 42 0 332 236 17 28 chr17 14701161 14701339 -70737141 + CT-rich Low_complexity Low_complexity 4 179 0 323 192 13 0 chr17 14701388 14701466 -70737014 + CT-rich Low_complexity Low_complexity 2 80 0 784 135 5 43 chr17 14701483 14701668 -70736812 + (TTCCC)n Simple_repeat Simple_repeat 3 180 0 340 277 145 32 chr17 14702029 14702278 -70736202 - L1ME LINE L1 -459 5662 5386 343 281 111 50 chr17 14702316 14703034 -70735446 - L1ME LINE L1 -795 5351 4590 30 45 0 0 chr17 14703173 14703217 -70735263 + AT_rich Low_complexity Low_complexity 1 44 0 2343 104 0 0 chr17 14703761 14704070 -70734410 - AluSg1 SINE Alu 0 309 1 28 0 0 0 chr17 14704293 14704321 -70734159 + AT_rich Low_complexity Low_complexity 1 28 0 308 154 0 0 chr17 14705309 14705361 -70733119 - L1MB3 LINE L1 -1 6182 6131 241 123 31 0 chr17 14705361 14705426 -70733054 + (TA)n Simple_repeat Simple_repeat 2 68 0 2035 179 16 44 chr17 14705433 14705456 -70733024 - L1MB3 LINE L1 -17 6166 6144 2091 114 3 7 chr17 14705456 14705754 -70732726 - AluY SINE Alu -14 297 1 2035 179 16 44 chr17 14705754 14706079 -70732401 - L1MB3 LINE L1 -39 6144 5830 2591 71 0 0 chr17 14706079 14706390 -70732090 - AluY SINE Alu 0 311 1 2035 179 16 44 chr17 14706390 14706471 -70732009 - L1MB3 LINE L1 -353 5830 5748 1293 159 0 0 chr17 14706565 14706754 -70731726 - MER5A DNA MER1_type 0 189 1 1224 15 0 0 chr17 14708113 14708244 -70730236 - L1PA5 LINE L1 -9 6145 6015 2887 6 0 0 chr17 14709294 14709605 -70728875 - AluYa5 SINE Alu 0 311 1 251 292 0 15 chr17 14709831 14709896 -70728584 - L2 LINE L2 0 3313 3250 2131 188 27 17 chr17 14709920 14710325 -70728155 - MLT2D LTR ERVL 0 414 6 585 229 21 7 chr17 14710330 14710470 -70728010 - MER5B DNA MER1_type -35 143 2 456 316 72 8 chr17 14710470 14710718 -70727762 - L2 LINE L2 -51 3262 2999 351 0 0 0 chr17 14710863 14710902 -70727578 + (CA)n Simple_repeat Simple_repeat 2 40 0 395 136 21 78 chr17 14711344 14711535 -70726945 + (TA)n Simple_repeat Simple_repeat 1 180 0 1210 174 17 17 chr17 14711564 14711805 -70726675 - L1MC3 LINE L1 -21 7764 7524 2291 106 23 0 chr17 14712408 14712711 -70725769 - AluSg SINE Alu 0 310 1 310 321 36 0 chr17 14712729 14712841 -70725639 - L2 LINE L2 -3 3269 3154 290 312 29 59 chr17 14713293 14713463 -70725017 + MIR SINE MIR 86 250 -12 464 60 30 0 chr17 14714269 14714336 -70724144 + (TTTTC)n Simple_repeat Simple_repeat 2 70 0 262 299 0 26 chr17 14715162 14715239 -70723241 + L2 LINE L2 3232 3306 -7 228 203 149 40 chr17 14715307 14715381 -70723099 - L3b LINE CR1 -4 1579 1498 1977 123 10 17 chr17 14715724 14716049 -70722431 + AluSq SINE Alu 1 313 0 26 64 0 0 chr17 14716470 14716517 -70721963 + AT_rich Low_complexity Low_complexity 1 47 0 2363 143 43 13 chr17 14716676 14716693 -70721787 - MER57A LTR ERV1 0 403 388 2227 112 13 0 chr17 14716693 14716998 -70721482 + AluSc SINE Alu 1 309 0 2363 143 43 13 chr17 14716998 14717371 -70721109 - MER57A LTR ERV1 -15 388 1 273 256 31 78 chr17 14718003 14718061 -70720419 - L1ME LINE L1 -454 5667 5608 2312 85 0 0 chr17 14718061 14718370 -70720110 - AluY SINE Alu 0 309 1 273 256 31 78 chr17 14718370 14718439 -70720041 - L1ME LINE L1 -513 5608 5545 2312 82 0 57 chr17 14719920 14719953 -70718527 - AluSx SINE Alu 0 312 279 414 0 0 0 chr17 14719953 14719999 -70718481 + (TTTA)n Simple_repeat Simple_repeat 2 47 0 2312 82 0 57 chr17 14719999 14720296 -70718184 - AluSx SINE Alu -33 279 1 333 338 83 30 chr17 14720768 14721034 -70717446 + MLT1L LTR MaLR 1 280 -335 2410 101 0 0 chr17 14721056 14721362 -70717118 - AluSx SINE Alu -6 306 1 2167 84 0 25 chr17 14722639 14722981 -70715499 + AluSg SINE Alu 2 336 0 235 263 97 42 chr17 14723742 14723959 -70714521 - L1ME4a LINE L1 -16 6105 5877 317 223 150 86 chr17 14724033 14724253 -70714227 - L1ME4a LINE L1 -382 5739 5506 27 49 0 0 chr17 14724262 14724303 -70714177 + AT_rich Low_complexity Low_complexity 1 41 0 2164 83 31 3 chr17 14724340 14724630 -70713850 - AluY SINE Alu -13 298 1 21 36 0 0 chr17 14724707 14724735 -70713745 + AT_rich Low_complexity Low_complexity 1 28 0 1960 132 3 0 chr17 14725040 14725329 -70713151 - AluSx SINE Alu 0 312 23 885 236 16 68 chr17 14725704 14726014 -70712466 + L2 LINE L2 3020 3313 0 1915 149 0 32 chr17 14726302 14726610 -70711870 - AluJb SINE Alu -13 299 2 371 320 80 20 chr17 14727545 14727745 -70710735 + L3 LINE CR1 1347 1558 -19 2195 123 3 0 chr17 14728019 14728327 -70710153 + AluSx SINE Alu 1 309 -3 1800 217 50 28 chr17 14728359 14728796 -70709684 - MLT1C LTR MaLR 0 467 41 2560 151 51 12 chr17 14728796 14729206 -70709274 - MSTB LTR MaLR 0 426 1 9933 156 6 41 chr17 14729206 14730572 -70707908 - MSTB-int LTR MaLR 0 1651 356 2276 114 0 0 chr17 14730572 14730879 -70707601 - AluY SINE Alu -4 307 1 9933 156 6 41 chr17 14730879 14731223 -70707257 - MSTB-int LTR MaLR -1295 356 1 2345 188 28 26 chr17 14731223 14731648 -70706832 - MSTB LTR MaLR 0 426 1 1800 217 50 28 chr17 14731648 14731665 -70706815 - MLT1C LTR MaLR -425 42 1 251 300 11 11 chr17 14732230 14732320 -70706160 + MLT1F1 LTR MaLR 136 225 -324 388 250 62 0 chr17 14732407 14732534 -70705946 + MLT1F1 LTR MaLR 327 409 0 730 250 7 7 chr17 14732680 14732832 -70705648 + MER5A DNA MER1_type 38 189 0 301 176 0 0 chr17 14732926 14732977 -70705503 - MER5B DNA MER1_type -126 52 2 2329 62 3 10 chr17 14733222 14733512 -70704968 + AluY SINE Alu 1 288 -23 871 149 8 15 chr17 14733940 14734100 -70704380 - FLAM_C SINE Alu 0 159 1 212 332 121 30 chr17 14734104 14734336 -70704144 + L2 LINE L2 2149 2401 -913 583 264 57 44 chr17 14735820 14736135 -70702345 - L1ME4a LINE L1 0 6121 5803 2486 75 3 0 chr17 14736376 14736681 -70701799 - AluY SINE Alu -5 306 1 370 251 120 23 chr17 14737074 14737249 -70701231 + L1MB8 LINE L1 5986 6177 -1 295 310 54 22 chr17 14737572 14737713 -70700767 + MIR3 SINE MIR 63 208 0 2265 103 13 0 chr17 14738006 14738307 -70700173 - AluSp SINE Alu -8 305 1 2114 122 3 25 chr17 14738689 14739008 -70699472 + AluSx SINE Alu 1 312 0 243 0 0 0 chr17 14740036 14740063 -70698417 + (CA)n Simple_repeat Simple_repeat 2 28 0 317 208 14 28 chr17 14740521 14740593 -70697887 - L2 LINE L2 -1 3271 3201 5316 147 147 44 chr17 14740931 14741132 -70697348 + Tigger3b DNA MER2_type 1 180 -2848 2176 91 3 46 chr17 14741132 14741439 -70697041 + AluSp SINE Alu 2 295 -18 5316 147 147 44 chr17 14741439 14741467 -70697013 + Tigger3b DNA MER2_type 180 204 -2824 279 0 0 0 chr17 14741467 14741498 -70696982 + (CA)n Simple_repeat Simple_repeat 2 32 0 5316 147 147 44 chr17 14741498 14742007 -70696473 + Tigger3b DNA MER2_type 204 659 -2369 2238 84 10 13 chr17 14742007 14742306 -70696174 + AluSc SINE Alu 1 298 -11 5316 147 147 44 chr17 14742306 14742681 -70695799 + Tigger3b DNA MER2_type 659 1231 0 2271 148 81 26 chr17 14743479 14743640 -70694840 - MER39 LTR ERV1 -2 705 554 2371 92 0 0 chr17 14743640 14743935 -70694545 - AluSg SINE Alu -15 295 1 2271 148 81 26 chr17 14743935 14744417 -70694063 - MER39 LTR ERV1 -153 554 4 777 254 150 52 chr17 14745102 14745448 -70693032 - L2 LINE L2 -1 3312 2933 433 324 37 0 chr17 14745481 14745617 -70692863 - L2 LINE L2 -529 2785 2645 187 134 59 34 chr17 14745967 14746086 -70692394 + (TA)n Simple_repeat Simple_repeat 2 123 0 192 40 0 0 chr17 14746086 14746111 -70692369 + (GA)n Simple_repeat Simple_repeat 2 26 0 1231 217 29 53 chr17 14747480 14747983 -70690497 + L1M4 LINE L1 2289 2856 -3290 587 113 12 0 chr17 14747983 14748063 -70690417 + AluS SINE Alu 220 300 -12 269 278 59 25 chr17 14748064 14748256 -70690224 - L1MC/D LINE L1 -286 5884 5724 2118 131 0 0 chr17 14749690 14749995 -70688485 + AluSq SINE Alu 1 305 -8 461 289 19 19 chr17 14750251 14750407 -70688073 - MIR SINE MIR 0 262 107 225 217 17 0 chr17 14750915 14750975 -70687505 + (TA)n Simple_repeat Simple_repeat 1 61 0 267 235 78 39 chr17 14751085 14751187 -70687293 - MLT1I LTR MaLR -20 389 284 2490 35 0 0 chr17 14751207 14751527 -70686953 + AluY SINE Alu 1 320 0 207 0 0 0 chr17 14752037 14752060 -70686420 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3547 164 55 36 chr17 14753727 14754465 -70684015 + LTR1B LTR ERV1 1 771 -14 1972 125 69 19 chr17 14754474 14754835 -70683645 + L1MB3 LINE L1 5805 6183 0 1989 168 116 13 chr17 14755781 14756162 -70682318 + MER83 LTR ERV1 23 442 -6 188 317 0 0 chr17 14756766 14756826 -70681654 + L2 LINE L2 2590 2649 -665 30 27 0 0 chr17 14756894 14756931 -70681549 + AT_rich Low_complexity Low_complexity 1 37 0 31761 113 13 58 chr17 14756935 14763397 -70675083 + L1PA8 LINE L1 12 6172 0 2157 108 162 7 chr17 14763561 14763995 -70674485 + MER4B LTR ERV1 5 788 -84 301 54 0 0 chr17 14763995 14764032 -70674448 + MER4A LTR ERV1 628 664 0 261 0 0 0 chr17 14764067 14764096 -70674384 + (TG)n Simple_repeat Simple_repeat 2 30 0 3090 113 21 0 chr17 14764261 14764686 -70673794 + MER57B LTR ERV1 1 434 0 456 299 176 49 chr17 14764707 14765115 -70673365 + L2 LINE L2 2812 3271 -1 1054 294 83 41 chr17 14765141 14765366 -70673114 + L2 LINE L2 2429 2643 -670 309 26 0 0 chr17 14765366 14765404 -70673076 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 2113 95 0 11 chr17 14765408 14765693 -70672787 - AluSx SINE Alu -30 282 1 1054 294 83 41 chr17 14765693 14766313 -70672167 + L2 LINE L2 2645 3313 0 239 330 79 49 chr17 14766322 14766525 -70671955 + MIR SINE MIR 1 209 -53 216 200 0 0 chr17 14766739 14766779 -70671701 + GA-rich Low_complexity Low_complexity 3 42 0 299 295 87 51 chr17 14767790 14767948 -70670532 - L1ME4a LINE L1 -123 5998 5847 2350 90 0 3 chr17 14767948 14768248 -70670232 + AluSq SINE Alu 5 303 -10 299 295 87 51 chr17 14768248 14768482 -70669998 - L1ME4a LINE L1 -274 5847 5592 344 308 150 23 chr17 14768560 14768826 -70669654 - L1ME4a LINE L1 -1082 5064 4765 360 278 35 42 chr17 14768849 14768993 -70669487 - L2 LINE L2 -5 3267 3125 472 309 198 45 chr17 14769071 14769849 -70668631 - L2 LINE L2 -561 2753 2095 2449 95 0 0 chr17 14769849 14770155 -70668325 + AluSx SINE Alu 1 306 -6 472 309 198 45 chr17 14770155 14770330 -70668150 - L2 LINE L2 -1219 2095 1948 192 77 0 0 chr17 14770330 14770356 -70668124 + (TTG)n Simple_repeat Simple_repeat 2 27 0 472 309 198 45 chr17 14770356 14770668 -70667812 - L2 LINE L2 -1366 1948 1293 305 318 16 51 chr17 14770729 14770944 -70667536 - L1 LINE L1 -1419 4727 4519 2611 117 14 3 chr17 14770950 14771310 -70667170 - THE1B LTR MaLR 0 364 1 755 212 0 27 chr17 14772047 14772193 -70666287 - FLAM_A SINE Alu 0 142 1 2140 92 0 76 chr17 14772515 14772843 -70665637 - AluSq SINE Alu -10 303 1 22 0 0 0 chr17 14772852 14772874 -70665606 + AT_rich Low_complexity Low_complexity 1 22 0 1231 41 0 0 chr17 14773133 14773279 -70665201 - AluY SINE Alu -10 301 156 1827 173 0 7 chr17 14773809 14774109 -70664371 - AluJb SINE Alu -14 298 1 239 100 0 0 chr17 14774205 14774235 -70664245 - U6 snRNA snRNA -77 30 1 253 284 30 0 chr17 14774573 14774640 -70663840 + MLT1L LTR MaLR 219 287 -328 2840 181 29 64 chr17 14774695 14775247 -70663233 - L1MC2 LINE L1 0 6344 5819 2189 91 0 0 chr17 14775247 14775523 -70662957 - AluSp SINE Alu -1 312 37 2840 181 29 64 chr17 14775523 14775654 -70662826 - L1MC2 LINE L1 -525 5819 5685 578 285 106 12 chr17 14775656 14775912 -70662568 + MLT1L LTR MaLR 329 608 -7 527 349 35 23 chr17 14776623 14776881 -70661599 - L3 LINE CR1 -236 1341 1081 932 265 27 31 chr17 14776892 14777186 -70661294 - LTR16C LTR ERVL 0 491 199 218 145 16 48 chr17 14777380 14777442 -70661038 + (TTTA)n Simple_repeat Simple_repeat 3 62 0 250 188 62 16 chr17 14778742 14778806 -70659674 + MLT1I LTR MaLR 319 385 -24 1629 173 83 67 chr17 14779175 14779621 -70658859 + MLT1C LTR MaLR 1 453 -14 459 230 71 8 chr17 14780483 14780609 -70657871 + MIR SINE MIR 86 219 -43 236 348 0 22 chr17 14780737 14780842 -70657638 - MIR SINE MIR -63 145 49 1868 162 7 10 chr17 14780901 14781210 -70657270 + AluJb SINE Alu 5 312 0 649 162 40 29 chr17 14782716 14782889 -70655591 - L1MB3 LINE L1 -2 6181 6007 1292 161 56 14 chr17 14782919 14783015 -70655465 - L1MB2 LINE L1 -149 6022 5931 505 123 0 12 chr17 14783015 14783096 -70655384 - MADE1 DNA Mariner 0 80 1 1292 161 56 14 chr17 14783096 14783285 -70655195 - L1MB2 LINE L1 -240 5931 5725 574 329 25 16 chr17 14783903 14784155 -70654325 - MIR SINE MIR -6 256 3 377 202 17 17 chr17 14785522 14785641 -70652839 + CT-rich Low_complexity Low_complexity 1 119 0 526 131 84 82 chr17 14785996 14786189 -70652291 + MER21B LTR ERV1 680 861 -2 1969 239 18 22 chr17 14786943 14787450 -70651030 - LTR31 LTR ERV1 0 619 115 2122 129 0 3 chr17 14787851 14788161 -70650319 - AluSc SINE Alu 0 309 1 415 200 29 7 chr17 14788428 14788568 -70649912 + (TG)n Simple_repeat Simple_repeat 2 144 0 430 339 107 43 chr17 14788725 14789285 -70649195 + L3 LINE CR1 981 1576 -1 185 343 86 29 chr17 14790503 14790608 -70647872 + L2 LINE L2 3154 3264 -8 217 292 0 0 chr17 14791318 14791366 -70647114 + L2 LINE L2 3185 3232 -40 405 0 0 0 chr17 14791874 14791919 -70646561 + (CA)n Simple_repeat Simple_repeat 2 46 0 512 339 131 30 chr17 14792106 14792438 -70646042 + L2 LINE L2 2059 2356 -958 1811 132 0 33 chr17 14792438 14792710 -70645770 - AluSx SINE Alu -16 296 34 512 339 131 30 chr17 14792710 14793176 -70645304 + L2 LINE L2 2356 2938 -376 257 270 0 14 chr17 14793318 14793392 -70645088 + MER63 DNA MER1_type 984 1056 -5 592 296 62 33 chr17 14793476 14793750 -70644730 + L2 LINE L2 3029 3310 -3 1118 89 0 6 chr17 14793997 14794155 -70644325 + L1MA1 LINE L1 6146 6302 0 322 262 60 0 chr17 14795675 14795759 -70642721 + MIR SINE MIR 60 148 -60 305 231 231 0 chr17 14795866 14795987 -70642493 + Charlie8 DNA MER1_type 61 209 -2208 398 145 14 0 chr17 14796216 14796285 -70642195 - MIR SINE MIR -10 252 183 189 250 59 59 chr17 14796388 14796456 -70642024 + MIR SINE MIR 33 100 -162 295 23 45 0 chr17 14796497 14796541 -70641939 + (TCTA)n Simple_repeat Simple_repeat 3 48 0 1315 212 60 106 chr17 14796551 14797069 -70641411 - L1ME2 LINE L1 -10 6154 5661 323 303 28 28 chr17 14797070 14797215 -70641265 + MIR SINE MIR 118 262 0 358 283 39 11 chr17 14798459 14798639 -70639841 - L1ME4a LINE L1 -227 5894 5710 1756 201 44 16 chr17 14798972 14799427 -70639053 + L1MB7 LINE L1 5693 6159 -25 234 160 0 0 chr17 14800377 14800427 -70638053 + (CAT)n Simple_repeat Simple_repeat 2 51 0 180 0 0 0 chr17 14801037 14801057 -70637423 + (GGA)n Simple_repeat Simple_repeat 1 20 0 1080 158 16 0 chr17 14801241 14801425 -70637055 + MSTA LTR MaLR 242 428 0 5591 150 9 5 chr17 14801531 14803194 -70635286 + L1PB1 LINE L1 4126 5792 -359 246 173 0 53 chr17 14803194 14803269 -70635211 + (TA)n Simple_repeat Simple_repeat 1 71 0 2542 104 3 3 chr17 14803278 14803633 -70634847 + L1PB1 LINE L1 5791 6145 -6 24 67 0 0 chr17 14804719 14804764 -70633716 + AT_rich Low_complexity Low_complexity 1 45 0 326 70 0 53 chr17 14804840 14804897 -70633583 + L1PB1 LINE L1 6098 6151 0 22 56 0 0 chr17 14805069 14805105 -70633375 + AT_rich Low_complexity Low_complexity 1 36 0 503 306 0 0 chr17 14805152 14805276 -70633204 + MER5B DNA MER1_type 1 124 -54 2500 47 0 7 chr17 14805276 14805573 -70632907 - AluY SINE Alu -16 295 1 804 45 0 36 chr17 14805599 14805710 -70632770 + AluY SINE Alu 204 310 -1 222 196 0 43 chr17 14805712 14805758 -70632722 - MER5B DNA MER1_type -134 44 1 710 279 45 38 chr17 14805976 14806395 -70632085 - L1MDa LINE L1 -3558 2982 2561 390 235 43 71 chr17 14806401 14806656 -70631824 - L1MDa LINE L1 -4026 2514 2267 2457 79 0 0 chr17 14806675 14806978 -70631502 - AluY SINE Alu -8 303 1 183 254 0 0 chr17 14807133 14807196 -70631284 + T-rich Low_complexity Low_complexity 2 64 0 785 207 101 24 chr17 14807232 14807440 -70631040 + MIR SINE MIR 8 231 -31 327 296 105 17 chr17 14807907 14808079 -70630401 - HAL1 LINE L1 -847 1660 1474 204 179 0 0 chr17 14808415 14808454 -70630026 + (ATG)n Simple_repeat Simple_repeat 1 39 0 242 233 82 0 chr17 14808664 14808737 -70629743 + MIR3 SINE MIR 87 165 -43 822 227 55 81 chr17 14808884 14809281 -70629199 - L1ME1 LINE L1 -9 6157 5768 206 293 69 0 chr17 14809338 14809396 -70629084 + L2 LINE L2 3211 3272 0 306 356 34 7 chr17 14809722 14809871 -70628609 + MIR3 SINE MIR 45 197 -11 260 299 140 19 chr17 14811028 14811135 -70627345 + MIR3 SINE MIR 67 186 -22 447 19 0 0 chr17 14811258 14811310 -70627170 + (TG)n Simple_repeat Simple_repeat 2 53 0 317 276 105 86 chr17 14811603 14811928 -70626552 + HAL1b LINE L1 1 257 -1091 245 175 16 79 chr17 14811975 14812049 -70626431 + HAL1 LINE L1 1425 1489 -1018 2034 152 3 0 chr17 14812049 14812345 -70626135 + AluSq SINE Alu 1 297 -16 245 175 16 79 chr17 14812345 14812396 -70626084 + HAL1 LINE L1 1489 1542 -965 2194 152 106 2 chr17 14812451 14812933 -70625547 - L1MA9 LINE L1 0 6312 5781 456 51 0 0 chr17 14812944 14813003 -70625477 + (TAGA)n Simple_repeat Simple_repeat 4 62 0 1752 233 31 12 chr17 14813036 14813624 -70624856 - L1 LINE L1 -2802 3232 2634 1296 99 6 0 chr17 14813633 14813804 -70624676 + AluSp SINE Alu 130 301 -12 2420 264 56 31 chr17 14813804 14814822 -70623658 - L1 LINE L1 -3397 2637 1646 2206 88 10 14 chr17 14814822 14815119 -70623361 + AluSg SINE Alu 1 296 -14 2420 264 56 31 chr17 14815119 14817394 -70621086 - L1 LINE L1 -4388 1646 13 283 268 10 21 chr17 14817403 14817500 -70620980 + HAL1 LINE L1 1578 1673 -834 2292 106 0 3 chr17 14817531 14817833 -70620647 - AluSq SINE Alu -12 301 1 336 245 69 31 chr17 14818138 14818297 -70620183 + L1MDa LINE L1 2471 2635 -3905 337 325 56 25 chr17 14818358 14818555 -70619925 + L1MDa LINE L1 3996 4198 -2342 24 53 0 0 chr17 14818640 14818678 -70619802 + AT_rich Low_complexity Low_complexity 1 38 0 553 272 120 51 chr17 14818686 14819002 -70619478 + L1MDa LINE L1 4271 4608 -1932 566 294 104 40 chr17 14819126 14819613 -70618867 + L1MDa LINE L1 5160 5615 -949 839 133 0 44 chr17 14819613 14819748 -70618732 + FLAM_C SINE Alu 1 129 -4 566 294 104 40 chr17 14819748 14820366 -70618114 + L1MDa LINE L1 5615 6324 -240 240 250 0 0 chr17 14820603 14820655 -70617825 + GA-rich Low_complexity Low_complexity 3 54 0 487 220 10 0 chr17 14820805 14820905 -70617575 + MER5A DNA MER1_type 9 109 -80 251 152 87 0 chr17 14821679 14821725 -70616755 - L2 LINE L2 0 3313 3264 320 307 63 0 chr17 14821729 14821856 -70616624 + MIR SINE MIR 72 206 -56 2736 89 23 105 chr17 14822270 14822754 -70615726 - MLT2A1 LTR ERVL 0 444 1 2182 110 0 0 chr17 14822803 14823109 -70615371 - AluSx SINE Alu 0 306 1 208 195 0 46 chr17 14823140 14823227 -70615253 + GA-rich Low_complexity Low_complexity 2 84 0 342 0 0 0 chr17 14823465 14823503 -70614977 + (CA)n Simple_repeat Simple_repeat 2 39 0 232 154 31 46 chr17 14823549 14823614 -70614866 + CT-rich Low_complexity Low_complexity 4 67 0 426 301 59 7 chr17 14824710 14824863 -70613617 + MIR SINE MIR 24 184 -78 275 290 60 30 chr17 14825188 14825288 -70613192 + MIR SINE MIR 17 119 -89 343 295 16 52 chr17 14826331 14826534 -70611946 + MIR SINE MIR 38 231 -31 464 294 153 24 chr17 14828058 14828398 -70610082 + L2 LINE L2 1729 2112 -1202 239 275 162 18 chr17 14828424 14828590 -70609890 - MIR SINE MIR -40 222 25 459 270 20 83 chr17 14829056 14829217 -70609263 - MIR SINE MIR -21 241 94 2000 112 24 17 chr17 14829217 14829233 -70609247 - AluSx SINE Alu -14 298 284 199 0 0 0 chr17 14829233 14829255 -70609225 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2000 112 24 17 chr17 14829255 14829534 -70608946 - AluSx SINE Alu -28 284 1 459 270 20 83 chr17 14829534 14829576 -70608904 - MIR SINE MIR -168 94 51 2061 136 3 0 chr17 14830022 14830317 -70608163 - AluSx SINE Alu -16 296 1 311 385 63 25 chr17 14831531 14831770 -70606710 - L2 LINE L2 -21 3251 3004 298 339 43 9 chr17 14832713 14832828 -70605652 - MIR3 SINE MIR -14 194 76 2326 91 3 0 chr17 14833094 14833390 -70605090 - AluSc SINE Alu -12 297 1 215 211 28 42 chr17 14833517 14833588 -70604892 - L2 LINE L2 0 3272 3203 269 273 264 8 chr17 14833632 14833753 -70604727 - LTR67 LTR ERVL -396 161 10 1140 310 71 51 chr17 14834966 14836436 -70602044 + L1MEd LINE L1 5 1540 -4770 6052 102 22 1 chr17 14836451 14837940 -70600540 - L1PA8 LINE L1 -1 6171 4660 2609 102 31 26 chr17 14837940 14838362 -70600118 + L1PA8 LINE L1 4208 4631 -1515 329 298 16 0 chr17 14838363 14838484 -70599996 + L1MEd LINE L1 1532 1654 -4656 228 250 0 0 chr17 14838859 14838911 -70599569 + A-rich Low_complexity Low_complexity 4 55 0 237 367 76 26 chr17 14838921 14839185 -70599295 - LTR16C LTR ERVL -11 480 204 338 346 147 0 chr17 14839745 14839901 -70598579 - MIR3 SINE MIR -15 193 15 864 231 84 5 chr17 14839914 14840117 -70598363 - MER58A DNA MER1_type -5 219 1 183 80 0 0 chr17 14840966 14840991 -70597489 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 250 86 0 0 chr17 14841694 14841729 -70596751 + MLT1F1 LTR MaLR 68 102 -465 2569 188 13 44 chr17 14841729 14842346 -70596134 + L1MD3 LINE L1 7390 7987 -8 2285 86 3 3 chr17 14842350 14842642 -70595838 + AluSc SINE Alu 1 292 -17 1284 290 114 52 chr17 14843400 14843502 -70594978 + L2 LINE L2 2467 2561 -752 4356 97 12 54 chr17 14843502 14844190 -70594290 - L1PA13 LINE L1 -4 6159 5501 1284 290 114 52 chr17 14844190 14844885 -70593595 + L2 LINE L2 2561 3312 -1 330 355 19 0 chr17 14845664 14845771 -70592709 + MIR SINE MIR 6 114 -148 494 332 64 57 chr17 14847203 14847610 -70590870 - MLT1J LTR MaLR 0 511 102 180 255 39 20 chr17 14847665 14847716 -70590764 - L3 LINE CR1 -1078 499 448 12246 213 61 35 chr17 14848059 14849581 -70588899 - L1M2 LINE L1 -743 5227 3747 459 0 0 0 chr17 14849581 14849632 -70588848 + (TTTC)n Simple_repeat Simple_repeat 1 51 0 12246 213 61 35 chr17 14849632 14853198 -70585282 - L1M2 LINE L1 -2223 3747 316 242 29 29 0 chr17 14853846 14853881 -70584599 + (TG)n Simple_repeat Simple_repeat 1 36 0 252 130 0 0 chr17 14853881 14853927 -70584553 + (GA)n Simple_repeat Simple_repeat 2 47 0 2295 87 3 13 chr17 14854154 14854454 -70584026 + AluY SINE Alu 1 297 -14 303 289 168 13 chr17 14854949 14855098 -70583382 + HAL1 LINE L1 2250 2421 -86 407 298 60 42 chr17 14855314 14855482 -70582998 + MIR SINE MIR 86 256 -6 391 130 29 0 chr17 14857269 14857338 -70581142 + L1PA10 LINE L1 6096 6166 -2 947 260 64 57 chr17 14857387 14857791 -70580689 - MLT1I LTR MaLR -2 407 1 1581 230 38 53 chr17 14861315 14861784 -70576696 - MLT1C LTR MaLR 0 467 6 2313 115 0 0 chr17 14861949 14862261 -70576219 - AluSx SINE Alu 0 312 1 640 199 0 38 chr17 14862834 14862965 -70575515 - FLAM_A SINE Alu -7 126 1 2920 97 0 42 chr17 14862993 14863157 -70575323 - MER57B LTR ERV1 0 434 265 2055 110 3 7 chr17 14863157 14863447 -70575033 + AluSx SINE Alu 3 291 -21 2920 97 0 42 chr17 14863447 14863734 -70574746 - MER57B LTR ERV1 -169 265 2 288 236 48 91 chr17 14865278 14865443 -70573037 - L1MC5 LINE L1 -562 7399 7242 227 274 63 53 chr17 14865628 14865818 -70572662 - L1MC5 LINE L1 -770 7191 7000 2003 122 0 0 chr17 14866132 14866403 -70572077 + AluSx SINE Alu 35 305 -7 946 222 87 64 chr17 14866500 14867032 -70571448 - L1MC5 LINE L1 -89 7872 7329 251 109 0 0 chr17 14867069 14867115 -70571365 + LTR66 LTR ERVL 394 439 -171 1286 214 19 89 chr17 14867127 14867612 -70570868 - L1MC5 LINE L1 -661 7300 6850 2248 144 75 8 chr17 14867628 14868030 -70570450 - LTR47A LTR ERVL -23 429 1 755 217 58 5 chr17 14868052 14868241 -70570239 - L1MC5 LINE L1 -1129 6832 6634 21 0 0 0 chr17 14868378 14868399 -70570081 + AT_rich Low_complexity Low_complexity 1 21 0 228 313 0 52 chr17 14868411 14868526 -70569954 - L1M4 LINE L1 -2014 4132 4024 30 0 0 0 chr17 14868574 14868604 -70569876 + AT_rich Low_complexity Low_complexity 1 30 0 36 0 0 0 chr17 14868630 14868666 -70569814 + AT_rich Low_complexity Low_complexity 1 36 0 1690 130 35 7 chr17 14868917 14869202 -70569278 - L1PA16 LINE L1 -9 6157 5865 2274 116 3 3 chr17 14869687 14869998 -70568482 - AluSq SINE Alu -2 311 1 21 36 0 0 chr17 14870315 14870343 -70568137 + AT_rich Low_complexity Low_complexity 1 28 0 197 256 0 13 chr17 14870476 14870554 -70567926 + T-rich Low_complexity Low_complexity 4 80 0 258 316 18 0 chr17 14870948 14871062 -70567418 - MER103 DNA DNA -49 117 2 684 0 0 0 chr17 14871718 14871794 -70566686 + (CAATA)n Simple_repeat Simple_repeat 4 79 0 195 344 244 0 chr17 14871827 14871917 -70566563 + MIR SINE MIR 36 147 -61 479 241 46 73 chr17 14872059 14872320 -70566160 - MER112 DNA MER1_type -5 255 2 533 284 87 41 chr17 14872329 14873051 -70565429 - L1ME LINE L1 -515 5649 4890 1465 264 109 28 chr17 14873408 14874132 -70564348 - MER20B DNA MER1_type -1 783 1 1266 179 167 32 chr17 14875778 14876103 -70562377 - MLT1A1 LTR MaLR -1 389 1 1675 153 80 58 chr17 14877902 14878267 -70560213 - MLT1A2 LTR MaLR -1 373 1 537 275 87 45 chr17 14878717 14879004 -70559476 + HAL1 LINE L1 2206 2504 -3 1495 218 97 47 chr17 14879651 14880096 -70558384 - MLT1C LTR MaLR 0 467 1 21 0 0 0 chr17 14880361 14880382 -70558098 + AT_rich Low_complexity Low_complexity 1 21 0 3110 55 3 13 chr17 14880408 14880792 -70557688 + L1PA5 LINE L1 5769 6148 -6 7557 167 29 17 chr17 14880798 14882297 -70556183 + L1PA14 LINE L1 3890 5422 -739 1976 158 0 10 chr17 14882297 14882600 -70555880 + AluSx SINE Alu 1 300 -12 7557 167 29 17 chr17 14882600 14883349 -70555131 + L1PA14 LINE L1 5422 6160 -1 225 0 0 0 chr17 14884074 14884099 -70554381 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 688 296 109 17 chr17 14885236 14885648 -70552832 + L1ME4a LINE L1 5603 6052 -69 328 337 112 0 chr17 14885926 14886095 -70552385 + MIR SINE MIR 67 254 -8 274 259 83 19 chr17 14887384 14887492 -70550988 - MIR3 SINE MIR -6 202 88 239 246 33 0 chr17 14887620 14887681 -70550799 - L2 LINE L2 -5 3308 3246 338 326 38 27 chr17 14887698 14887882 -70550598 + MIR SINE MIR 6 191 -71 181 362 0 0 chr17 14887963 14888010 -70550470 - L2 LINE L2 -86 3186 3140 2525 64 0 16 chr17 14888580 14888891 -70549589 - AluY SINE Alu -5 306 1 25 51 0 0 chr17 14889402 14889441 -70549039 + AT_rich Low_complexity Low_complexity 1 39 0 222 118 59 0 chr17 14889511 14889562 -70548918 + (TA)n Simple_repeat Simple_repeat 2 55 0 1515 208 88 67 chr17 14889625 14889817 -70548663 + L1MC4 LINE L1 6646 6833 -1209 2183 82 32 3 chr17 14889817 14890099 -70548381 - AluY SINE Alu -21 290 1 1515 208 88 67 chr17 14890099 14890440 -70548040 + L1MC4 LINE L1 6833 7190 -852 959 296 79 7 chr17 14890461 14890866 -70547614 - L1MC4a LINE L1 -178 7630 7197 301 365 68 10 chr17 14891589 14891781 -70546699 - MIR SINE MIR -9 253 51 312 363 20 27 chr17 14892162 14892308 -70546172 - MIR3 SINE MIR -28 180 36 23 54 0 0 chr17 14892461 14892498 -70545982 + AT_rich Low_complexity Low_complexity 1 37 0 403 235 135 0 chr17 14892543 14892678 -70545802 - L1MB7 LINE L1 -10 6174 6015 598 278 47 71 chr17 14892683 14892938 -70545542 - MIR SINE MIR -1 261 13 249 237 17 0 chr17 14894362 14894421 -70544059 - MIR SINE MIR -6 256 197 784 182 8 0 chr17 14894467 14894588 -70543892 + FLAM_C SINE Alu 1 122 -11 27 29 0 0 chr17 14894589 14894623 -70543857 + AT_rich Low_complexity Low_complexity 1 34 0 23 0 0 0 chr17 14894821 14894844 -70543636 + AT_rich Low_complexity Low_complexity 1 23 0 705 278 65 42 chr17 14894913 14895317 -70543163 + L1ME LINE L1 5276 5685 -436 2659 45 0 0 chr17 14895563 14895871 -70542609 - AluY SINE Alu -3 308 1 1573 203 28 19 chr17 14898043 14898364 -70540116 + Tigger7 DNA MER2_type 2 325 -2162 329 193 145 0 chr17 14898354 14898437 -70540043 + Tigger7 DNA MER2_type 2393 2487 0 * 1890 186 19 38 chr17 14898519 14898889 -70539591 + MLT1A1 LTR MaLR 1 363 -2 1882 159 67 14 chr17 14900421 14900766 -70537714 - MLT1A1 LTR MaLR -2 363 1 28 91 0 0 chr17 14901331 14901408 -70537072 + AT_rich Low_complexity Low_complexity 1 77 0 234 289 173 56 chr17 14901514 14901695 -70536785 - L1MB7 LINE L1 -198 5923 5765 2043 113 0 3 chr17 14901695 14902013 -70536467 - AluSg SINE Alu 0 317 1 234 289 173 56 chr17 14902013 14902172 -70536308 - L1MB7 LINE L1 -356 5765 5542 578 230 103 0 chr17 14902712 14902838 -70535642 + Tigger3(Golem) DNA MER2_type 4 142 -2887 1572 151 8 12 chr17 14902850 14903109 -70535371 + Tigger3(Golem) DNA MER2_type 2771 3028 -1 218 307 102 57 chr17 14903269 14903357 -70535123 + L2 LINE L2 3174 3265 -7 555 170 0 20 chr17 14903432 14903532 -70534948 - Tigger7 DNA MER2_type 0 2487 2390 1207 191 0 109 chr17 14903538 14903699 -70534781 - Tigger7 DNA MER2_type -472 261 145 2291 113 3 0 chr17 14903699 14904010 -70534470 + AluSx SINE Alu 1 312 0 1207 191 0 109 chr17 14904010 14904141 -70534339 - Tigger7 DNA MER2_type -588 145 1 1145 209 33 2 chr17 14904257 14904609 -70533871 + Charlie1 DNA MER1_type 1 2761 0 298 300 11 22 chr17 14904687 14904777 -70533703 - L2 LINE L2 0 3272 3184 189 326 97 28 chr17 14904851 14904995 -70533485 - L2 LINE L2 -333 2980 2827 1469 179 71 0 chr17 14905091 14905387 -70533093 - L1MB3 LINE L1 -2 6181 5865 29 28 0 0 chr17 14905684 14905720 -70532760 + AT_rich Low_complexity Low_complexity 1 36 0 851 234 27 5 chr17 14906074 14906258 -70532222 - MER5A DNA MER1_type 0 189 2 296 216 64 105 chr17 14907291 14907418 -70531062 - MER67D LTR ERV1 -2 541 421 2206 110 0 0 chr17 14907418 14907717 -70530763 - AluSc SINE Alu -10 299 1 296 216 64 105 chr17 14907717 14907760 -70530720 - MER67D LTR ERV1 -122 421 378 180 0 0 0 chr17 14907761 14907781 -70530699 + (A)n Simple_repeat Simple_repeat 1 20 0 303 331 16 16 chr17 14907884 14908008 -70530472 - MER67B LTR ERV1 -500 161 38 243 178 0 110 chr17 14908042 14908115 -70530365 - MIR SINE MIR -155 107 43 253 403 52 0 chr17 14909045 14909179 -70529301 - MIR SINE MIR -38 224 84 264 288 44 79 chr17 14909201 14909430 -70529050 + L2 LINE L2 2991 3211 -102 2082 133 0 3 chr17 14909448 14909741 -70528739 + AluSx SINE Alu 1 292 -20 521 214 61 46 chr17 14909750 14909881 -70528599 - MER5A DNA MER1_type -53 136 4 268 291 35 12 chr17 14909945 14910031 -70528449 + L2 LINE L2 3185 3272 0 4532 116 317 36 chr17 14910394 14911392 -70527088 + MER52C LTR ERV1 1 1278 0 192 331 127 28 chr17 14911614 14911756 -70526724 + L2 LINE L2 3117 3272 0 234 250 12 48 chr17 14911829 14911913 -70526567 + MIR SINE MIR 172 252 -10 204 341 91 23 chr17 14912201 14912289 -70526191 - MIR SINE MIR -116 146 53 1062 247 80 21 chr17 14913079 14913456 -70525024 + HAL1b LINE L1 211 609 -739 314 286 36 36 chr17 14913606 14913718 -70524762 + MIR SINE MIR 34 145 -63 233 182 0 0 chr17 14914938 14914982 -70523498 - MIR SINE MIR -13 249 206 349 182 111 30 chr17 14916713 14916812 -70521668 - MIR SINE MIR 0 262 156 203 136 45 0 chr17 14916938 14916982 -70521498 + GA-rich Low_complexity Low_complexity 3 48 0 4912 225 47 40 chr17 14918331 14918835 -70519645 - L1MB5 LINE L1 -7 6665 6166 1950 143 0 29 chr17 14918835 14919142 -70519338 - AluSx SINE Alu -14 298 1 4912 225 47 40 chr17 14919142 14920018 -70518462 - L1MB5 LINE L1 -506 6166 5298 2768 150 16 41 chr17 14920018 14920531 -70517949 - L1MA7 LINE L1 -1 6290 5791 4912 225 47 40 chr17 14920531 14920715 -70517765 - L1MB5 LINE L1 -1374 5298 5117 623 186 8 54 chr17 14920715 14920844 -70517636 + AluJo/FLAM SINE Alu 1 123 -179 2293 114 0 0 chr17 14920844 14921142 -70517338 + AluSx SINE Alu 1 298 -14 4912 225 47 40 chr17 14921142 14921970 -70516510 - L1MB5 LINE L1 -1554 5118 4248 3986 241 27 46 chr17 14921957 14923652 -70514828 - L1MB5 LINE L1 -4479 2167 498 * 344 289 44 92 chr17 14923835 14924108 -70514372 - L1MB5 LINE L1 -6275 267 8 738 286 18 0 chr17 14924507 14924734 -70513746 + L1ME3A LINE L1 5815 6045 -125 725 213 165 9 chr17 14925422 14925652 -70512828 + L1MB7 LINE L1 5919 6184 0 213 121 0 0 chr17 14925720 14925753 -70512727 + (TTTA)n Simple_repeat Simple_repeat 4 36 0 238 308 0 13 chr17 14926206 14926284 -70512196 - L2 LINE L2 -3 3310 3234 987 200 148 37 chr17 14926432 14926757 -70511723 + MER93b LTR ERV1 12 372 -1 245 324 67 0 chr17 14926764 14926869 -70511611 - HAL1b LINE L1 -785 563 452 28 0 0 0 chr17 14928367 14928395 -70510085 + AT_rich Low_complexity Low_complexity 1 28 0 33 25 0 0 chr17 14928689 14928729 -70509751 + AT_rich Low_complexity Low_complexity 1 40 0 1014 117 56 6 chr17 14928730 14928892 -70509588 + MSTA LTR MaLR 1 170 -258 501 78 0 65 chr17 14928924 14929001 -70509479 - L1PA8A LINE L1 -224 5907 5836 * 1317 100 21 0 chr17 14929000 14929190 -70509290 + L1P LINE L1 5148 5341 -805 1231 174 54 9 chr17 14929190 14929414 -70509066 + MSTA LTR MaLR 195 428 0 2180 99 0 30 chr17 14929805 14930109 -70508371 - AluSg SINE Alu -15 295 1 21 0 0 0 chr17 14933808 14933829 -70504651 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr17 14934846 14934867 -70503613 + AT_rich Low_complexity Low_complexity 1 21 0 796 293 96 9 chr17 14936033 14936357 -70502123 - MLT1K LTR MaLR -29 559 208 29 78 0 0 chr17 14936520 14936584 -70501896 + AT_rich Low_complexity Low_complexity 1 64 0 2223 123 0 0 chr17 14936629 14936929 -70501551 + AluY SINE Alu 1 300 -11 27 49 0 0 chr17 14937369 14937410 -70501070 + AT_rich Low_complexity Low_complexity 1 41 0 310 264 61 27 chr17 14937697 14937845 -70500635 + L1M4 LINE L1 3726 3878 -2268 350 57 19 0 chr17 14938267 14938320 -70500160 + (TC)n Simple_repeat Simple_repeat 1 54 0 579 310 114 53 chr17 14938566 14938927 -70499553 - MLT1K LTR MaLR -17 571 189 4379 159 47 34 chr17 14939300 14940867 -70497613 + L1PB4 LINE L1 4558 6154 -2 311 250 29 93 chr17 14941038 14941236 -70497244 - L1ME3A LINE L1 -25 6137 5955 2220 232 47 82 chr17 14941324 14942412 -70496068 - L1MC5 LINE L1 -432 7529 6476 45 62 0 0 chr17 14942596 14942676 -70495804 + AT_rich Low_complexity Low_complexity 1 80 0 2120 114 3 7 chr17 14942795 14943117 -70495363 + AluSx SINE Alu 1 312 0 437 249 69 40 chr17 14943137 14943310 -70495170 - HAL1b LINE L1 -744 604 427 1869 130 20 0 chr17 14943468 14943768 -70494712 - L1PA13 LINE L1 0 6163 5858 3066 247 56 24 chr17 14943959 14945108 -70493372 - L1MDa LINE L1 -2998 3542 2329 182 37 37 0 chr17 14945108 14945135 -70493345 + (TA)n Simple_repeat Simple_repeat 1 28 0 3066 247 56 24 chr17 14945135 14945413 -70493067 - L1MDa LINE L1 -4211 2329 2061 438 333 41 54 chr17 14945821 14946136 -70492344 + L1MEc LINE L1 114 424 -5972 233 224 26 40 chr17 14946473 14946549 -70491931 + L1MEc LINE L1 656 730 -5475 22 0 0 0 chr17 14946587 14946609 -70491871 + AT_rich Low_complexity Low_complexity 1 22 0 1188 251 64 103 chr17 14946659 14948390 -70490090 + L1MEc LINE L1 956 2538 -3677 249 108 0 0 chr17 14948390 14948427 -70490053 + (TG)n Simple_repeat Simple_repeat 2 38 0 1188 251 64 103 chr17 14948427 14948971 -70489509 + L1MEc LINE L1 2538 3102 -3113 11115 158 13 7 chr17 14948981 14951461 -70487019 + L1PA15-16 LINE L1 5 2723 -4126 2426 103 35 16 chr17 14951461 14951829 -70486651 + THE1C LTR MaLR 1 375 0 7255 115 198 44 chr17 14951829 14953198 -70485282 + THE1C-int LTR MaLR 1 1580 0 2456 128 8 8 chr17 14953198 14953573 -70484907 + THE1C LTR MaLR 1 375 0 12319 211 23 21 chr17 14953573 14956861 -70481619 + L1PA15-16 LINE L1 2719 6014 -835 2406 103 0 0 chr17 14956883 14957194 -70481286 + AluSq SINE Alu 1 311 -2 459 120 0 0 chr17 14957407 14957482 -70480998 - L1MB8 LINE L1 0 6178 6104 3724 224 50 13 chr17 14957511 14958691 -70479789 - L1MB4 LINE L1 -6 6174 5038 180 0 0 0 chr17 14958691 14958711 -70479769 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 3724 224 50 13 chr17 14958711 14959042 -70479438 - L1MB4 LINE L1 -1142 5038 4588 2098 116 0 0 chr17 14959042 14959351 -70479129 + AluSg SINE Alu 1 309 0 3724 224 50 13 chr17 14959351 14959543 -70478937 - L1MB4 LINE L1 -1592 4588 4404 962 251 138 3 chr17 14959565 14959943 -70478537 + L1ME LINE L1 4902 5330 -816 4177 213 56 43 chr17 14959950 14960099 -70478381 + L1M4 LINE L1 2 148 -6394 405 0 0 0 chr17 14960099 14960144 -70478336 + (CA)n Simple_repeat Simple_repeat 1 45 0 4177 213 56 43 chr17 14960144 14961068 -70477412 + L1M4 LINE L1 148 1089 -5453 2381 91 0 0 chr17 14961647 14961944 -70476536 + AluSp SINE Alu 1 297 -16 29 28 0 0 chr17 14963094 14963130 -70475350 + AT_rich Low_complexity Low_complexity 1 36 0 501 347 62 39 chr17 14963741 14964260 -70474220 - L2 LINE L2 -9 3304 2770 229 229 0 16 chr17 14964688 14964749 -70473731 + GA-rich Low_complexity Low_complexity 2 61 0 204 125 0 0 chr17 14964753 14964785 -70473695 + (GGGA)n Simple_repeat Simple_repeat 1 32 0 354 278 68 15 chr17 14965476 14965609 -70472871 + MLT1I LTR MaLR 3 142 -267 4721 203 71 28 chr17 14965611 14966016 -70472464 - L1M4 LINE L1 -516 5662 5276 2339 159 20 32 chr17 14966016 14966455 -70472025 + Tigger2a DNA MER2_type 1 434 0 4721 203 71 28 chr17 14966455 14966567 -70471913 - L1M4 LINE L1 -902 5276 5170 2195 97 0 10 chr17 14966567 14966856 -70471624 - AluSx SINE Alu -26 286 1 4721 203 71 28 chr17 14966856 14967586 -70470894 - L1M4 LINE L1 -1008 5170 4324 1615 170 0 42 chr17 14967586 14967897 -70470583 - AluSx SINE Alu -14 298 1 4721 203 71 28 chr17 14967897 14968345 -70470135 - L1M4 LINE L1 -1854 4324 3897 242 164 55 36 chr17 14968730 14968785 -70469695 - MER20B DNA MER1_type -640 143 88 424 276 98 6 chr17 14969989 14970152 -70468328 + L1ME LINE L1 5531 5708 -413 247 318 79 32 chr17 14971168 14971294 -70467186 - MIR SINE MIR -50 212 81 1864 147 35 7 chr17 14971523 14971809 -70466671 - AluJb SINE Alu -16 296 3 242 143 78 91 chr17 14972706 14972783 -70465697 - L1ME LINE L1 -291 5830 5755 349 304 44 23 chr17 14972788 14972978 -70465502 - L1ME LINE L1 -467 5654 5455 1817 230 101 12 chr17 14974499 14974995 -70463485 - MLT1F LTR MaLR 0 542 3 255 237 13 53 chr17 14975065 14975141 -70463339 - MIR SINE MIR -177 85 13 9027 84 13 0 chr17 14977053 14978294 -70460186 - L1PA7 LINE L1 -1135 5011 3755 6928 52 9 1 chr17 14978295 14979429 -70459051 + L1PA7 LINE L1 5017 6158 0 390 282 127 48 chr17 14980891 14981342 -70457138 + L1ME LINE L1 5308 5804 -317 211 253 108 36 chr17 14981675 14981758 -70456722 - L2 LINE L2 -21 3251 3163 323 279 266 34 chr17 14982495 14983134 -70455346 + L2 LINE L2 1436 2222 -1092 258 266 115 78 chr17 14983178 14983370 -70455110 - MIR SINE MIR -56 206 8 365 276 112 88 chr17 14983381 14983577 -70454903 + L2 LINE L2 2222 2427 -887 2064 168 80 15 chr17 14983577 14983977 -70454503 + MSTB LTR MaLR 1 426 0 365 276 112 88 chr17 14983977 14984030 -70454450 + L2 LINE L2 2427 2477 -837 234 128 0 0 chr17 14984061 14984100 -70454380 + (CA)n Simple_repeat Simple_repeat 2 40 0 261 378 49 5 chr17 14984136 14984321 -70454159 + L2 LINE L2 2720 2912 -402 320 381 32 0 chr17 14984549 14984675 -70453805 + L2 LINE L2 3143 3272 0 198 133 0 0 chr17 14984740 14984770 -70453710 + MER5A DNA MER1_type 4 33 -156 191 327 142 18 chr17 14984812 14984925 -70453555 + MIR SINE MIR 129 255 -7 207 0 0 0 chr17 14985122 14985145 -70453335 + (CAAA)n Simple_repeat Simple_repeat 3 25 0 655 322 74 36 chr17 14986221 14986334 -70452146 - L2 LINE L2 -6 3307 3200 264 59 0 0 chr17 14986334 14986368 -70452112 + (TG)n Simple_repeat Simple_repeat 2 35 0 655 322 74 36 chr17 14986368 14986617 -70451863 - L2 LINE L2 -113 3200 2931 24 32 0 0 chr17 14987781 14987812 -70450668 + AT_rich Low_complexity Low_complexity 1 31 0 306 284 142 39 chr17 14987841 14988123 -70450357 - L1MC4a LINE L1 -1916 5892 5582 1122 189 38 14 chr17 14988124 14988336 -70450144 + AluJo SINE Alu 86 302 -10 252 59 0 0 chr17 14988353 14988387 -70450093 + (GGAA)n Simple_repeat Simple_repeat 3 36 0 808 273 48 17 chr17 14988491 14988722 -70449758 - MIR SINE MIR -11 251 14 1007 150 21 27 chr17 14989058 14989245 -70449235 + L1PA16 LINE L1 5980 6165 -1 413 134 0 0 chr17 14989509 14989576 -70448904 - L1MB7 LINE L1 -64 6120 6054 195 266 65 129 chr17 14991035 14991159 -70447321 + MER5B DNA MER1_type 1 116 -62 * 409 233 87 10 chr17 14991139 14991242 -70447238 + MIR SINE MIR 35 145 -63 184 212 30 15 chr17 14991397 14991463 -70447017 + CT-rich Low_complexity Low_complexity 2 68 0 549 244 81 9 chr17 14991554 14991904 -70446576 + MLT1G1 LTR MaLR 135 590 -5 2798 16 0 0 chr17 14992076 14992384 -70446096 + AluYa5 SINE Alu 1 308 -3 2218 107 0 7 chr17 14992581 14992872 -70445608 - AluSc SINE Alu -20 289 1 2735 128 46 51 chr17 14994263 14994714 -70443766 + L1MA5A LINE L1 5732 6181 -116 2464 83 0 3 chr17 14994714 14995026 -70443454 + AluY SINE Alu 1 311 0 2735 128 46 51 chr17 14995026 14995143 -70443337 + L1MA5A LINE L1 6181 6297 0 794 198 71 19 chr17 14996026 14996238 -70442242 - MLT1A1 LTR MaLR -3 362 140 1071 152 74 0 chr17 14996273 14996490 -70441990 - L1MA8 LINE L1 -54 6237 6005 315 141 127 0 chr17 14996497 14996568 -70441912 - MLT1A1 LTR MaLR -211 154 75 27 73 0 0 chr17 14996676 14996731 -70441749 + AT_rich Low_complexity Low_complexity 1 55 0 2528 124 8 0 chr17 14996809 14997179 -70441301 - THE1C LTR MaLR -2 373 1 490 286 78 19 chr17 14998948 14999102 -70439378 - MER5B DNA MER1_type -15 163 1 1901 203 123 0 chr17 14999715 15000163 -70438317 - MLT1D LTR MaLR 0 505 3 1856 189 31 83 chr17 15000517 15000561 -70437919 + LTR32 LTR ERVL 15 60 -411 2466 81 0 0 chr17 15000561 15000869 -70437611 + AluY SINE Alu 1 308 -3 1856 189 31 83 chr17 15000869 15000977 -70437503 + LTR32 LTR ERVL 60 172 -299 1757 83 147 4 chr17 15000977 15001229 -70437251 - AluSg SINE Alu -22 288 1 1856 189 31 83 chr17 15001229 15001557 -70436923 + LTR32 LTR ERVL 172 471 0 2724 141 44 96 chr17 15001674 15002291 -70436189 - LTR12 LTR ERV1 -129 585 1 452 245 10 0 chr17 15002538 15002636 -70435844 - MER5A DNA MER1_type -84 105 7 904 201 17 0 chr17 15002650 15002824 -70435656 + MER45A DNA AcHobo 1 177 -1 189 293 61 40 chr17 15002841 15002940 -70435540 + MIR SINE MIR 50 150 -112 2270 88 3 31 chr17 15003762 15004080 -70434400 + AluSg SINE Alu 1 309 -1 695 279 6 12 chr17 15004138 15004310 -70434170 - MER5B DNA MER1_type 0 178 8 901 250 17 30 chr17 15004352 15004588 -70433892 + MIR SINE MIR 8 240 -22 797 167 119 0 chr17 15005108 15005276 -70433204 + MER5A DNA MER1_type 1 188 -1 2119 93 4 4 chr17 15005460 15005739 -70432741 + AluSg SINE Alu 1 279 -31 451 301 41 0 chr17 15007514 15007660 -70430820 + MIR SINE MIR 1 152 -110 837 193 0 101 chr17 15007668 15007886 -70430594 - MER63A DNA MER1_type -7 203 8 418 300 8 0 chr17 15008576 15008696 -70429784 - MIR3 SINE MIR -18 190 70 977 168 5 41 chr17 15009596 15009792 -70428688 - MER5A DNA MER1_type 0 189 1 21 36 0 0 chr17 15010935 15010963 -70427517 + AT_rich Low_complexity Low_complexity 1 28 0 2660 146 17 0 chr17 15011240 15011659 -70426821 - MSTB LTR MaLR 0 426 1 1168 238 140 53 chr17 15011857 15012349 -70426131 - MLT1F LTR MaLR 0 542 8 412 267 88 47 chr17 15012526 15013100 -70425380 + L1MEc LINE L1 1239 1728 -4487 386 252 70 68 chr17 15013132 15013561 -70424919 + L1MEc LINE L1 2840 3269 -2946 1709 207 42 42 chr17 15013609 15014179 -70424301 - L1 LINE L1 -1387 4759 4190 880 145 54 6 chr17 15014174 15014340 -70424140 - L1 LINE L1 -2173 3973 3800 * 1385 238 3 20 chr17 15014338 15014695 -70423785 + L1 LINE L1 4766 5116 -1030 416 259 158 20 chr17 15014715 15015042 -70423438 + L1MC4a LINE L1 5547 5648 -473 2003 88 4 0 chr17 15015610 15015871 -70422609 - AluSg SINE Alu -12 298 37 6667 153 97 10 chr17 15015932 15016831 -70421649 + L1PA15 LINE L1 3507 4327 -1838 1964 156 3 10 chr17 15016831 15017145 -70421335 + AluSx SINE Alu 1 312 0 6667 153 97 10 chr17 15017145 15018390 -70420090 + L1PA15 LINE L1 4327 5937 -228 2030 88 0 19 chr17 15018390 15018650 -70419830 - AluSg SINE Alu -17 293 39 6667 153 97 10 chr17 15018650 15018857 -70419623 + L1PA15 LINE L1 5937 6125 -40 430 294 91 34 chr17 15019680 15020174 -70418306 - L1ME3 LINE L1 -335 5827 5306 30 27 0 0 chr17 15020243 15020280 -70418200 + AT_rich Low_complexity Low_complexity 1 37 0 195 143 71 48 chr17 15020446 15020488 -70417992 - MIR SINE MIR -68 194 152 566 316 72 29 chr17 15020562 15021145 -70417335 - L1ME3 LINE L1 -979 5167 4560 371 282 45 86 chr17 15021187 15021432 -70417048 - L2 LINE L2 0 3313 3079 275 282 47 0 chr17 15021530 15021615 -70416865 - LTR33A LTR ERVL -89 434 346 319 261 45 6 chr17 15021769 15021897 -70416583 - HERVL LTR ERVL -663 4822 4685 1809 154 67 14 chr17 15021907 15022278 -70416202 + L1MC1 LINE L1 5943 6333 0 779 268 21 70 chr17 15022385 15022758 -70415722 - LTR41 LTR ERVL -10 763 409 379 196 142 20 chr17 15022889 15022965 -70415515 - LTR41 LTR ERVL -607 166 101 993 155 0 0 chr17 15022965 15023146 -70415334 + L1MA4 LINE L1 6117 6297 -3 379 196 142 20 chr17 15023146 15023217 -70415263 - LTR41 LTR ERVL -672 101 1 497 294 50 0 chr17 15023579 15023759 -70414721 - LTR33A LTR ERVL -14 509 321 288 282 51 68 chr17 15024149 15024266 -70414214 + L2 LINE L2 3199 3313 0 255 335 55 30 chr17 15024438 15024602 -70413878 - L2 LINE L2 -617 2697 2530 214 270 95 16 chr17 15024627 15024690 -70413790 - L2 LINE L2 -58 3214 3147 747 100 9 0 chr17 15025142 15025252 -70413228 - AluSg/x SINE Alu -15 297 187 4132 261 80 50 chr17 15026209 15028489 -70409991 - L1M4 LINE L1 -972 5174 2820 1738 178 3 7 chr17 15028489 15028792 -70409688 - AluJb SINE Alu -10 302 1 4132 261 80 50 chr17 15028792 15028833 -70409647 - L1M4 LINE L1 -3326 2820 2782 3402 144 32 18 chr17 15029253 15029871 -70408609 - L1MB3 LINE L1 0 6183 5557 332 301 102 34 chr17 15030882 15030965 -70407515 + HAL1b LINE L1 278 354 -994 1108 133 133 15 chr17 15030965 15031160 -70407320 - MER20 DNA MER1_type -1 218 1 332 301 102 34 chr17 15031160 15031312 -70407168 + HAL1b LINE L1 354 529 -819 336 239 114 42 chr17 15031725 15031892 -70406588 + L1ME4a LINE L1 5908 6086 -35 21 0 0 0 chr17 15031919 15031940 -70406540 + AT_rich Low_complexity Low_complexity 1 21 0 572 252 75 0 chr17 15032843 15033002 -70405478 + MLT1I LTR MaLR 239 409 0 199 250 0 78 chr17 15033050 15033114 -70405366 + L2 LINE L2 3252 3310 -3 1776 108 46 81 chr17 15033116 15033439 -70405041 + AluJo SINE Alu 1 312 0 463 351 0 0 chr17 15033726 15033891 -70404589 + MIR3 SINE MIR 34 198 -10 2037 142 134 11 chr17 15034074 15034455 -70404025 + MSTA LTR MaLR 1 428 0 1821 289 42 20 chr17 15035239 15035769 -70402711 - MLT1H LTR MaLR -2 565 1 586 290 38 6 chr17 15035769 15035952 -70402528 + LTR33 LTR ERVL 23 211 -310 358 282 32 51 chr17 15036043 15036199 -70402281 - L2 LINE L2 -216 3097 2945 3227 29 3 5 chr17 15036600 15036979 -70401501 + L1PA3 LINE L1 5775 6152 -3 3123 167 59 26 chr17 15037091 15037511 -70400969 + MER39B LTR ERV1 6 410 -243 231 36 0 0 chr17 15037511 15037539 -70400941 + (TTTTC)n Simple_repeat Simple_repeat 2 29 0 2216 109 3 0 chr17 15037542 15037826 -70400654 - AluSx SINE Alu -27 285 1 3123 167 59 26 chr17 15037826 15037932 -70400548 + MER39B LTR ERV1 411 512 -141 2363 75 0 0 chr17 15037932 15038266 -70400214 + AluSc SINE Alu 1 334 0 3123 167 59 26 chr17 15038266 15038356 -70400124 + MER39B LTR ERV1 512 649 -4 710 316 82 28 chr17 15038383 15038849 -70399631 + LTR16C LTR ERVL 1 491 0 250 282 70 35 chr17 15039179 15039321 -70399159 - HAL1b LINE L1 -437 911 765 288 311 68 17 chr17 15039797 15039974 -70398506 + L1MC5 LINE L1 7302 7487 -474 198 0 0 0 chr17 15040623 15040645 -70397835 + (TG)n Simple_repeat Simple_repeat 2 23 0 1041 157 0 6 chr17 15040647 15040806 -70397674 - AluJb SINE Alu -30 282 125 220 340 21 21 chr17 15040956 15041050 -70397430 + MIR SINE MIR 54 147 -115 446 240 125 68 chr17 15041659 15041851 -70396629 - MER63A DNA MER1_type -4 206 4 484 319 77 39 chr17 15041960 15042349 -70396131 - L2 LINE L2 -2 3311 2908 2073 135 16 97 chr17 15042349 15042653 -70395827 - MER57A LTR ERV1 0 403 143 1570 180 7 11 chr17 15042653 15042936 -70395544 + AluJb SINE Alu 7 288 -24 2073 135 16 97 chr17 15042936 15043062 -70395418 - MER57A LTR ERV1 -260 143 8 190 375 14 0 chr17 15043076 15043148 -70395332 - L2 LINE L2 -500 2814 2742 249 318 0 0 chr17 15043229 15043317 -70395163 + MIR SINE MIR 175 262 0 180 0 0 0 chr17 15045191 15045211 -70393269 + (TC)n Simple_repeat Simple_repeat 2 21 0 680 214 10 57 chr17 15046390 15046582 -70391898 + MER5A DNA MER1_type 7 189 0 339 306 102 51 chr17 15047272 15047507 -70390973 - L2 LINE L2 -25 3247 3001 274 342 21 12 chr17 15047791 15048031 -70390449 + L1 LINE L1 4392 4633 -1513 1793 116 4 8 chr17 15048092 15048372 -70390108 + AluSx SINE Alu 33 311 0 354 231 36 159 chr17 15048487 15048738 -70389742 + L1MC4 LINE L1 5727 5946 -1862 1097 252 84 83 chr17 15048800 15050000 -70388480 + L1MC4 LINE L1 6428 7625 -417 2223 121 0 0 chr17 15050000 15050297 -70388183 + AluSx SINE Alu 1 297 -15 1097 252 84 83 chr17 15050297 15050624 -70387856 + L1MC4 LINE L1 7625 7950 -92 7024 188 176 19 chr17 15051304 15052821 -70385659 - MER52A LTR ERV1 0 1755 1 294 149 0 0 chr17 15052822 15052869 -70385611 + L1ME1 LINE L1 5397 5443 -735 764 193 40 0 chr17 15052870 15053020 -70385460 + FRAM SINE Alu 4 159 -17 3213 141 40 51 chr17 15053061 15053712 -70384768 + LTR48B LTR ERV1 1 644 0 321 160 50 26 chr17 15053753 15054058 -70384422 + (TA)n Simple_repeat Simple_repeat 1 312 0 373 137 10 75 chr17 15054060 15054370 -70384110 + (TATATG)n Simple_repeat Simple_repeat 1 289 0 1900 210 117 49 chr17 15054412 15055044 -70383436 + L1ME1 LINE L1 5471 6145 -21 261 298 39 19 chr17 15057308 15057412 -70381068 + MIR3 SINE MIR 102 207 -1 826 204 11 11 chr17 15058638 15058814 -70379666 - FRAM SINE Alu -1 175 1 363 294 78 80 chr17 15058880 15059278 -70379202 - L2 LINE L2 -61 3252 2856 1901 209 93 28 chr17 15059411 15059917 -70378563 - MLT1F LTR MaLR -3 539 1 314 265 114 8 chr17 15060858 15060990 -70377490 + MIR SINE MIR 47 192 -70 376 234 172 0 chr17 15061131 15061259 -70377221 - MER5A DNA MER1_type -3 186 37 500 240 24 16 chr17 15061296 15061421 -70377059 + MER5B DNA MER1_type 1 126 -52 2255 136 128 8 chr17 15061826 15062208 -70376272 - MSTA LTR MaLR 0 428 1 774 252 36 65 chr17 15064310 15064588 -70373892 - L2 LINE L2 -512 2802 2533 857 300 108 50 chr17 15064716 15064993 -70373487 + ERVL LTR ERVL 4430 4690 -1074 702 236 44 6 chr17 15064993 15065175 -70373305 + MER5A DNA MER1_type 1 189 0 857 300 108 50 chr17 15065175 15065245 -70373235 + ERVL LTR ERVL 4690 4755 -1009 2253 92 7 23 chr17 15065245 15065381 -70373099 + AluSq SINE Alu 1 138 -175 2250 78 4 0 chr17 15065381 15065686 -70372794 + AluY SINE Alu 1 306 0 2253 92 7 23 chr17 15065686 15065854 -70372626 + AluSq SINE Alu 138 301 -12 857 300 108 50 chr17 15065854 15066081 -70372399 + ERVL LTR ERVL 4755 5038 -726 250 388 0 0 chr17 15066731 15066811 -70371669 + LTR16C LTR ERVL 274 353 -138 272 242 15 0 chr17 15066813 15066879 -70371601 - LTR41 LTR ERVL -1 772 706 1161 239 135 88 chr17 15066968 15067603 -70370877 - LTR41 LTR ERVL -78 695 31 1088 205 146 10 chr17 15067695 15067997 -70370483 + MER2 DNA MER2_type 1 343 -1 531 237 0 0 chr17 15068046 15068160 -70370320 - L2 LINE L2 -777 2537 2424 815 233 60 104 chr17 15068243 15068300 -70370180 - L1M4 LINE L1 -1712 4434 4376 2110 144 0 7 chr17 15068300 15068606 -70369874 - AluJo SINE Alu -8 304 1 815 233 60 104 chr17 15068606 15069136 -70369344 - L1M4 LINE L1 -1770 4376 3873 2409 55 3 52 chr17 15069346 15069672 -70368808 - AluY SINE Alu -1 310 1 1884 174 0 3 chr17 15069962 15070272 -70368208 - AluJb SINE Alu -3 309 1 385 346 108 38 chr17 15070393 15070873 -70367607 - L2 LINE L2 -680 2634 2121 21 57 0 0 chr17 15070876 15070911 -70367569 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr17 15070939 15070960 -70367520 + AT_rich Low_complexity Low_complexity 1 21 0 2337 104 0 0 chr17 15070970 15071279 -70367201 + AluSc SINE Alu 1 309 0 269 250 159 0 chr17 15071416 15071504 -70366976 + L1ME4a LINE L1 5964 6065 -56 212 278 70 61 chr17 15071611 15071726 -70366754 + MER5B DNA MER1_type 7 122 -56 1222 183 32 57 chr17 15071866 15072145 -70366335 - AluJo SINE Alu -22 290 19 402 290 90 7 chr17 15072764 15072909 -70365571 + MER5B DNA MER1_type 17 173 -5 3465 203 97 14 chr17 15073051 15073776 -70364704 + MER45B DNA AcHobo 1 785 -255 6831 114 13 4 chr17 15073780 15074912 -70363568 - L1MA5A LINE L1 0 6297 5156 1031 188 121 21 chr17 15074913 15075153 -70363327 + MER45B DNA AcHobo 777 1040 0 234 269 45 60 chr17 15075663 15075797 -70362683 + MIR3 SINE MIR 3 134 -74 601 215 35 113 chr17 15076499 15076741 -70361739 - MER106B DNA MER1_type 0 236 2 398 268 39 0 chr17 15076868 15076995 -70361485 + MIR SINE MIR 118 249 -13 512 184 76 89 chr17 15077031 15077189 -70361291 - MLT1F1 LTR MaLR 0 567 412 593 40 40 0 chr17 15077314 15077390 -70361090 - MADE1 DNA Mariner -1 79 1 2298 85 34 3 chr17 15077393 15077686 -70360794 - AluY SINE Alu -9 302 1 206 278 19 0 chr17 15077861 15077915 -70360565 + L2 LINE L2 3189 3243 -29 547 40 0 26 chr17 15077915 15077991 -70360489 - AluY SINE Alu -234 75 2 2203 246 75 27 chr17 15078429 15079245 -70359235 + L1ME LINE L1 4361 5215 -931 1232 169 44 32 chr17 15079306 15079555 -70358925 + L1ME LINE L1 5526 5777 -389 503 263 75 38 chr17 15079587 15079800 -70358680 + LTR16C LTR ERVL 271 491 0 206 303 15 0 chr17 15080167 15080233 -70358247 - L2 LINE L2 -16 3297 3231 2618 49 0 3 chr17 15080410 15080716 -70357764 + AluY SINE Alu 1 305 -6 202 214 0 24 chr17 15081895 15081937 -70356543 + CT-rich Low_complexity Low_complexity 1 41 0 237 246 203 0 chr17 15082084 15082202 -70356278 + MER5A DNA MER1_type 42 183 -6 205 284 0 102 chr17 15082417 15082505 -70355975 + MIR SINE MIR 22 100 -108 601 198 9 0 chr17 15082566 15082677 -70355803 - MER5A DNA MER1_type -74 115 4 2144 76 10 24 chr17 15082712 15083000 -70355480 + AluSp SINE Alu 1 284 -29 709 122 10 0 chr17 15082902 15083000 -70355480 + AluSp/q SINE Alu 186 340 0 456 0 0 18 chr17 15083000 15083056 -70355424 + (CAA)n Simple_repeat Simple_repeat 2 180 0 1888 152 0 26 chr17 15083096 15083267 -70355213 - AluSx SINE Alu -11 301 127 275 80 40 0 chr17 15083267 15083317 -70355163 + (TTTG)n Simple_repeat Simple_repeat 1 52 0 2258 89 0 4 chr17 15083317 15083597 -70354883 - AluSg SINE Alu -31 279 1 1888 152 0 26 chr17 15083597 15083733 -70354747 - AluSx SINE Alu -183 129 1 1628 84 0 9 chr17 15083882 15084096 -70354384 + AluY SINE Alu 76 287 -24 778 250 6 0 chr17 15084097 15084265 -70354215 + LTR39 LTR ERV1 615 783 0 345 333 169 11 chr17 15084500 15084689 -70353791 + MIR SINE MIR 22 240 -22 644 336 42 8 chr17 15084731 15084969 -70353511 + L2 LINE L2 2682 2927 -387 599 280 136 18 chr17 15085788 15086153 -70352327 - LTR16C LTR ERVL -37 454 9 306 148 0 0 chr17 15086721 15086775 -70351705 + (GA)n Simple_repeat Simple_repeat 1 54 0 2537 68 0 0 chr17 15086791 15087099 -70351381 + AluY SINE Alu 1 308 -3 207 88 0 0 chr17 15087658 15087692 -70350788 + (T)n Simple_repeat Simple_repeat 1 34 0 2402 87 0 0 chr17 15087745 15088056 -70350424 + AluY SINE Alu 1 311 0 487 308 11 39 chr17 15088348 15088530 -70349950 + MIR SINE MIR 15 191 -71 2294 95 7 0 chr17 15089203 15089498 -70348982 - AluSx SINE Alu -15 297 1 560 186 0 62 chr17 15089612 15089741 -70348739 - MER103 DNA DNA -44 122 2 2093 161 45 34 chr17 15090021 15090563 -70347917 - MLT2A2 LTR ERVL 0 554 1 950 189 21 31 chr17 15091381 15091572 -70346908 + MER5A DNA MER1_type 1 189 0 2170 114 0 0 chr17 15091717 15092006 -70346474 - AluY SINE Alu -14 297 9 597 261 6 51 chr17 15092105 15092281 -70346199 + MER5B DNA MER1_type 1 168 -10 32 0 0 0 chr17 15092543 15092575 -70345905 + AT_rich Low_complexity Low_complexity 1 32 0 2052 135 7 7 chr17 15092575 15092878 -70345602 - AluSx SINE Alu -9 303 1 1886 223 135 24 chr17 15093143 15093609 -70344871 - MLT2B1 LTR ERVL 0 520 3 300 266 236 15 chr17 15094050 15094249 -70344231 - LTR33 LTR ERVL -99 422 180 190 340 68 49 chr17 15095380 15095542 -70342938 - MIR3 SINE MIR -2 206 42 319 323 38 8 chr17 15095640 15095773 -70342707 - MLT1K LTR MaLR -114 474 338 245 350 12 12 chr17 15095862 15095942 -70342538 - MLT1K LTR MaLR -429 159 80 206 311 16 0 chr17 15096973 15097034 -70341446 + MER5A DNA MER1_type 60 121 -68 923 250 62 102 chr17 15097573 15097993 -70340487 + L2 LINE L2 2911 3313 0 375 286 36 77 chr17 15098958 15098997 -70339483 - MIR SINE MIR -66 196 157 2390 95 0 0 chr17 15098997 15099302 -70339178 - AluSp SINE Alu -7 306 2 375 286 36 77 chr17 15099302 15099458 -70339022 - MIR SINE MIR -105 157 9 354 250 42 42 chr17 15100027 15100171 -70338309 + MER103 DNA DNA 10 153 -13 183 250 23 0 chr17 15101640 15101684 -70336796 - L2 LINE L2 -18 3295 3251 2333 170 36 0 chr17 15101877 15102288 -70336192 - MSTB1 LTR MaLR -6 426 1 4167 200 35 17 chr17 15103017 15104201 -70334279 - L1MB8 LINE L1 -23 6155 4961 186 71 0 0 chr17 15104395 15104423 -70334057 + (A)n Simple_repeat Simple_repeat 1 28 0 185 152 30 0 chr17 15104501 15104534 -70333946 - MIR SINE MIR -130 78 45 186 344 117 16 chr17 15104662 15104790 -70333690 + L2 LINE L2 3165 3305 -8 704 259 150 74 chr17 15105108 15105595 -70332885 - MLT1H1 LTR MaLR 0 555 32 2419 80 7 0 chr17 15106551 15106850 -70331630 + AluY SINE Alu 1 301 -10 261 0 0 0 chr17 15106850 15106879 -70331601 + (CTA)n Simple_repeat Simple_repeat 1 29 0 304 173 0 0 chr17 15107104 15107156 -70331324 - L1MC4 LINE L1 -1339 6703 6652 2144 99 3 41 chr17 15107706 15108020 -70330460 + AluSg SINE Alu 1 302 -8 267 31 0 0 chr17 15108703 15108735 -70329745 + (GGA)n Simple_repeat Simple_repeat 2 33 0 182 333 114 0 chr17 15108761 15108893 -70329587 + L2 LINE L2 2873 3019 -253 2216 105 0 10 chr17 15109270 15109566 -70328914 - AluSc SINE Alu -16 293 1 236 300 73 84 chr17 15110318 15110985 -70327495 + HAL1 LINE L1 1057 1716 -791 186 43 0 0 chr17 15110985 15111008 -70327472 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 242 175 0 0 chr17 15111299 15111339 -70327141 + L1MC4 LINE L1 7930 7969 -73 229 268 47 24 chr17 15111410 15111537 -70326943 - L2 LINE L2 -1477 1837 1708 1018 213 121 114 chr17 15111664 15112109 -70326371 + MER39 LTR ERV1 67 682 -25 263 317 10 29 chr17 15112237 15112341 -70326139 - L2 LINE L2 -1862 1452 1351 327 244 144 25 chr17 15112366 15112422 -70326058 - L1ME1 LINE L1 -15 6151 6103 318 26 0 0 chr17 15112422 15112461 -70326019 + (CA)n Simple_repeat Simple_repeat 2 40 0 327 244 144 25 chr17 15112461 15112564 -70325916 - L1ME1 LINE L1 -63 6103 5973 866 271 106 61 chr17 15112668 15113093 -70325387 - L1ME1 LINE L1 -172 5994 5551 875 300 114 24 chr17 15113157 15113620 -70324860 + LTR33 LTR ERVL 10 514 -7 260 356 0 0 chr17 15113696 15113797 -70324683 - L2 LINE L2 -2068 1246 1146 226 309 164 7 chr17 15113957 15114109 -70324371 + L2 LINE L2 3118 3293 -20 23 33 0 0 chr17 15114803 15114833 -70323647 + AT_rich Low_complexity Low_complexity 1 30 0 2383 38 41 7 chr17 15114875 15115166 -70323314 - AluY SINE Alu -10 301 1 242 292 64 43 chr17 15115199 15115365 -70323115 + MIR SINE MIR 12 177 -31 757 222 108 0 chr17 15116818 15117003 -70321477 + L2 LINE L2 3109 3313 0 386 221 107 41 chr17 15117419 15117541 -70320939 + LTR16C LTR ERVL 362 491 0 471 78 0 0 chr17 15117658 15117722 -70320758 + (TTC)n Simple_repeat Simple_repeat 1 64 0 180 0 0 0 chr17 15117751 15117771 -70320709 + (T)n Simple_repeat Simple_repeat 1 20 0 2157 113 3 13 chr17 15118061 15118371 -70320109 - AluSx SINE Alu -5 307 1 1674 126 69 11 chr17 15118409 15118686 -70319794 - Tigger2a DNA MER2_type 0 444 152 789 87 0 56 chr17 15118810 15118936 -70319544 - Tigger2a DNA MER2_type -311 123 5 2191 62 0 122 chr17 15119151 15119487 -70318993 + AluY SINE Alu 1 295 -6 209 253 25 38 chr17 15121347 15121426 -70317054 + MIR SINE MIR 74 151 -111 2079 301 168 8 chr17 15121455 15122527 -70315953 + L2 LINE L2 1145 2388 -926 491 335 42 0 chr17 15122554 15122799 -70315681 + L2 LINE L2 2751 3003 -310 292 340 32 27 chr17 15122864 15123049 -70315431 - L2 LINE L2 -132 3181 2996 23 33 0 0 chr17 15123312 15123342 -70315138 + AT_rich Low_complexity Low_complexity 1 30 0 555 344 44 59 chr17 15123470 15123611 -70314869 - L1M4 LINE L1 -2179 3967 3825 1804 148 62 45 chr17 15123611 15123969 -70314511 - MLT1A1 LTR MaLR -1 364 1 555 344 44 59 chr17 15123969 15124556 -70313924 - L1M4 LINE L1 -2321 3825 3250 390 139 14 14 chr17 15124960 15125032 -70313448 + L1MD3 LINE L1 7729 7800 -195 * 4141 236 72 19 chr17 15125027 15126228 -70312252 + L1MC3 LINE L1 5548 6811 -974 344 207 0 69 chr17 15126275 15126362 -70312118 + MLT1F1 LTR MaLR 45 125 -442 2674 210 24 15 chr17 15126362 15126947 -70311533 + L1MD3 LINE L1 7405 7994 -1 284 257 57 0 chr17 15128514 15128584 -70309896 + L2 LINE L2 3239 3312 -1 2057 112 3 11 chr17 15130200 15130516 -70307964 + AluSq SINE Alu 1 314 0 257 306 14 0 chr17 15130843 15130915 -70307565 - MIR SINE MIR -2 260 188 522 258 139 43 chr17 15131787 15131993 -70306487 + MER34 LTR ERV1 1 226 -316 2988 164 27 36 chr17 15131993 15132548 -70305932 + MER50 LTR ERV1 1 550 -184 3183 172 3 5 chr17 15132553 15133135 -70305345 - L1M4 LINE L1 -3113 3033 2453 * 8449 174 15 7 chr17 15133133 15134596 -70303884 + L1PB1 LINE L1 3025 4518 -1633 2203 114 0 0 chr17 15134596 15134886 -70303594 + AluSg SINE Alu 5 294 -16 8449 174 15 7 chr17 15134886 15136172 -70302308 + L1PB1 LINE L1 4518 5791 -360 297 66 55 44 chr17 15136173 15136264 -70302216 + (TA)n Simple_repeat Simple_repeat 2 93 0 2285 144 5 5 chr17 15136264 15136632 -70301848 + L1PB1 LINE L1 5776 6143 -8 848 99 7 70 chr17 15136651 15136793 -70301687 + MER50 LTR ERV1 537 669 -65 1189 201 64 18 chr17 15136819 15137102 -70301378 + MER39 LTR ERV1 412 707 0 1379 174 0 0 chr17 15137742 15137955 -70300525 - AluJb SINE Alu -16 296 84 22 35 0 0 chr17 15138172 15138201 -70300279 + AT_rich Low_complexity Low_complexity 1 29 0 330 306 16 16 chr17 15138511 15138635 -70299845 + MIR3 SINE MIR 49 172 -36 3056 39 3 0 chr17 15138666 15139028 -70299452 + L1PA5 LINE L1 5792 6154 0 680 321 65 6 chr17 15139127 15139553 -70298927 - L2 LINE L2 -309 3004 2535 1767 149 28 0 chr17 15139559 15139841 -70298639 + MER49 LTR ERV1 2 291 -632 1383 219 30 16 chr17 15139843 15140189 -70298291 + MER4D LTR ERV1 392 862 -41 2146 118 0 13 chr17 15140204 15140508 -70297972 - AluSx SINE Alu -12 300 1 192 200 0 0 chr17 15140571 15140621 -70297859 + (TA)n Simple_repeat Simple_repeat 2 51 0 225 191 0 0 chr17 15140623 15140665 -70297815 - L2 LINE L2 -846 2468 2427 449 185 12 12 chr17 15140955 15141036 -70297444 - MER90 LTR ERV1 0 614 534 385 278 184 31 chr17 15142578 15142833 -70295647 - MLT1L LTR MaLR -174 441 148 716 203 98 6 chr17 15142833 15142996 -70295484 + MER5B DNA MER1_type 1 178 0 249 167 0 0 chr17 15143230 15143284 -70295196 + (TA)n Simple_repeat Simple_repeat 2 55 0 1981 145 7 16 chr17 15143521 15143825 -70294655 - AluJb SINE Alu -9 303 3 717 186 70 6 chr17 15143826 15143982 -70294498 - MER5A DNA MER1_type -4 185 20 591 212 20 86 chr17 15144008 15144206 -70294274 + MER5A DNA MER1_type 5 189 0 180 259 111 0 chr17 15144212 15144266 -70294214 - MER5B DNA MER1_type -14 164 105 * 228 271 35 12 chr17 15144243 15144328 -70294152 + MER5B DNA MER1_type 87 173 -5 307 265 10 31 chr17 15144387 15144485 -70293995 - MER5A DNA MER1_type -85 104 9 305 164 99 81 chr17 15145005 15145086 -70293394 - MER8 DNA MER2_type -163 76 1 1956 116 0 34 chr17 15146899 15147214 -70291266 + AluSg SINE Alu 1 305 0 198 266 165 13 chr17 15147252 15147331 -70291149 + L2 LINE L2 3175 3265 -7 194 0 39 0 chr17 15147706 15147732 -70290748 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2267 116 0 0 chr17 15147739 15148032 -70290448 + AluSg SINE Alu 1 293 -17 2408 192 84 6 chr17 15149100 15149590 -70288890 + MER74A LTR ERVL 1 528 -30 580 239 33 33 chr17 15149722 15149906 -70288574 - MLT1F LTR MaLR -5 537 354 435 263 59 13 chr17 15149917 15150069 -70288411 - MIR SINE MIR -35 227 69 390 301 13 26 chr17 15150169 15150322 -70288158 + L2 LINE L2 3158 3308 -5 2350 106 0 0 chr17 15150634 15150936 -70287544 + AluSg SINE Alu 1 302 -8 198 0 0 0 chr17 15150939 15150961 -70287519 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 203 245 20 0 chr17 15150988 15151037 -70287443 + CT-rich Low_complexity Low_complexity 1 50 0 297 340 58 47 chr17 15151889 15152080 -70286400 - MIR3 SINE MIR -5 203 11 305 278 93 13 chr17 15153475 15153626 -70284854 + Charlie7 DNA MER1_type 2 164 -2448 2170 119 10 0 chr17 15153679 15153981 -70284499 - AluSx SINE Alu -7 305 1 248 327 30 0 chr17 15154227 15154328 -70284152 - MIR SINE MIR 0 262 159 3385 224 46 20 chr17 15154350 15155117 -70283363 - MER21B LTR ERV1 -58 805 19 312 329 0 67 chr17 15155142 15155291 -70283189 - MIR SINE MIR -119 143 5 2291 201 64 100 chr17 15157845 15158181 -70280299 - L1MC5 LINE L1 -416 7545 7199 1048 213 52 0 chr17 15158181 15158392 -70280088 + MER58A DNA MER1_type 1 222 -2 2291 201 64 100 chr17 15158392 15158606 -70279874 - L1MC5 LINE L1 -762 7199 6979 2165 119 0 0 chr17 15158606 15158923 -70279557 + AluSx SINE Alu 1 317 0 2291 201 64 100 chr17 15158923 15159402 -70279078 - L1MC5 LINE L1 -982 6979 6546 21 36 0 0 chr17 15159815 15159843 -70278637 + AT_rich Low_complexity Low_complexity 1 28 0 195 42 0 0 chr17 15160046 15160070 -70278410 + (CA)n Simple_repeat Simple_repeat 2 25 0 2296 109 0 3 chr17 15160103 15160407 -70278073 - AluSq SINE Alu -10 303 1 25 0 0 0 chr17 15160593 15160618 -70277862 + AT_rich Low_complexity Low_complexity 1 25 0 2236 205 49 107 chr17 15161545 15162074 -70276406 - MER21B LTR ERV1 -127 736 178 213 39 0 0 chr17 15162074 15162100 -70276380 + (TA)n Simple_repeat Simple_repeat 2 27 0 2345 97 0 7 chr17 15162100 15162399 -70276081 - AluSx SINE Alu -15 297 1 2236 205 49 107 chr17 15162399 15162624 -70275856 - MER21B LTR ERV1 -683 180 25 233 128 21 0 chr17 15164302 15164349 -70274131 + CT-rich Low_complexity Low_complexity 3 50 0 441 75 25 25 chr17 15164367 15164447 -70274033 + (TTTC)n Simple_repeat Simple_repeat 1 80 0 1400 191 37 58 chr17 15164456 15164750 -70273730 - AluJo SINE Alu -24 288 1 280 320 51 19 chr17 15165063 15165080 -70273400 - MIR3 SINE MIR -38 170 155 640 212 49 87 chr17 15165080 15165264 -70273216 - MER5B DNA MER1_type 0 178 2 280 320 51 19 chr17 15165264 15165402 -70273078 - MIR3 SINE MIR -53 155 10 456 263 136 24 chr17 15165960 15166173 -70272307 - MIR SINE MIR -3 259 23 580 251 84 48 chr17 15166381 15166608 -70271872 + LTR16A1 LTR ERVL 222 456 -1 503 271 43 21 chr17 15166610 15166798 -70271682 + HERV16 LTR ERVL 2 193 -4803 969 354 18 11 chr17 15166813 15167254 -70271226 + HERVL LTR ERVL 1856 2299 -3355 3610 342 78 25 chr17 15167286 15169834 -70268646 + HERVL LTR ERVL 2422 5103 -661 460 355 58 24 chr17 15170687 15171101 -70267379 - HERV16 LTR ERVL -4396 600 173 23 0 0 0 chr17 15171708 15171731 -70266749 + AT_rich Low_complexity Low_complexity 1 23 0 2518 57 0 0 chr17 15173142 15173439 -70265041 - AluY SINE Alu -14 297 1 2155 141 0 0 chr17 15174203 15174501 -70263979 - AluSx SINE Alu -14 298 1 227 140 20 0 chr17 15174977 15175027 -70263453 + CT-rich Low_complexity Low_complexity 2 52 0 682 291 78 48 chr17 15175276 15175684 -70262796 - HAL1 LINE L1 -7 2500 2073 2311 62 38 0 chr17 15175684 15175972 -70262508 - AluY SINE Alu -12 299 1 682 291 78 48 chr17 15175972 15176065 -70262415 - HAL1 LINE L1 -434 2073 1984 201 308 12 136 chr17 15176167 15176336 -70262144 + L2 LINE L2 3038 3185 -87 192 333 45 0 chr17 15176578 15176644 -70261836 - MIR SINE MIR -182 80 12 234 261 56 50 chr17 15177520 15177681 -70260799 - MIR3 SINE MIR -8 200 39 384 343 105 18 chr17 15178003 15178468 -70260012 + L2 LINE L2 2764 3264 -49 225 369 0 0 chr17 15179328 15179412 -70259068 - MIR SINE MIR -2 260 177 475 132 0 0 chr17 15179412 15179480 -70259000 - AluS SINE Alu -241 69 2 3530 132 37 70 chr17 15179482 15179876 -70258604 - LTR39 LTR ERV1 -158 625 220 1923 142 0 27 chr17 15179876 15180172 -70258308 + AluSx SINE Alu 1 288 -24 198 0 0 0 chr17 15180182 15180204 -70258276 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 3530 132 37 70 chr17 15180204 15180222 -70258258 - LTR39 LTR ERV1 -572 211 194 2446 129 56 8 chr17 15180222 15180618 -70257862 + L1PA15 LINE L1 5745 6159 -6 3530 132 37 70 chr17 15180618 15180839 -70257641 - LTR39 LTR ERV1 -589 194 1 2461 70 7 0 chr17 15181504 15181804 -70256676 + AluY SINE Alu 1 302 -9 253 298 0 0 chr17 15181877 15181934 -70256546 + MLT1K LTR MaLR 126 182 -406 744 187 8 0 chr17 15181973 15182096 -70256384 + FLAM_A SINE Alu 2 125 -8 211 26 0 53 chr17 15182951 15182989 -70255491 + (TTTTTG)n Simple_repeat Simple_repeat 3 38 0 245 95 0 143 chr17 15183024 15183087 -70255393 - L1PA6 LINE L1 -1 6153 6100 1879 175 94 52 chr17 15183374 15183831 -70254649 - MER66B LTR ERV1 -10 476 1 2317 79 6 38 chr17 15184276 15184592 -70253888 - AluY SINE Alu -5 306 1 24 53 0 0 chr17 15184827 15184865 -70253615 + AT_rich Low_complexity Low_complexity 1 38 0 382 254 103 48 chr17 15185460 15185968 -70252512 + L1ME LINE L1 5294 5822 -299 21 0 0 0 chr17 15186054 15186075 -70252405 + AT_rich Low_complexity Low_complexity 1 21 0 655 266 38 76 chr17 15186492 15186755 -70251725 - MIR SINE MIR 0 262 10 822 223 16 21 chr17 15188410 15188652 -70249828 + MER33 DNA MER1_type 1 241 -83 590 295 79 27 chr17 15188645 15189052 -70249428 + LTR33 LTR ERVL 32 459 -62 * 805 222 0 0 chr17 15189562 15189715 -70248765 + FRAM SINE Alu 10 162 -14 25 0 0 0 chr17 15190037 15190062 -70248418 + AT_rich Low_complexity Low_complexity 1 25 0 670 309 21 0 chr17 15190086 15190274 -70248206 - MIR SINE MIR -67 195 4 543 276 19 0 chr17 15190834 15190990 -70247490 - MER63A DNA MER1_type -8 202 44 321 223 75 11 chr17 15191323 15191417 -70247063 + MLT1K LTR MaLR 455 554 -34 209 492 0 0 chr17 15191903 15192025 -70246455 + L2 LINE L2 2844 2965 -349 1230 248 46 39 chr17 15192806 15193238 -70245242 - LTR16A LTR ERVL 0 450 16 243 211 18 35 chr17 15193514 15193571 -70244909 - MER115 DNA AcHobo 0 693 638 396 301 37 0 chr17 15193672 15193808 -70244672 - MER115 DNA AcHobo -437 256 116 2096 98 41 0 chr17 15193865 15194160 -70244320 + AluSx SINE Alu 1 307 -5 1998 121 10 17 chr17 15194200 15194497 -70243983 + AluSg SINE Alu 1 295 -15 2483 259 77 44 chr17 15194553 15194640 -70243840 - L1ME LINE L1 -4880 1200 1117 2399 74 7 3 chr17 15194640 15194950 -70243530 - AluY SINE Alu 0 311 1 2483 259 77 44 chr17 15194950 15196038 -70242442 - L1ME LINE L1 -4963 1117 8 266 240 325 5 chr17 15196862 15197062 -70241418 - LTR33A LTR ERVL -136 387 124 720 226 0 0 chr17 15197235 15197368 -70241112 + FLAM_C SINE Alu 1 133 0 292 216 20 10 chr17 15198620 15198722 -70239758 + GA-rich Low_complexity Low_complexity 2 104 0 2414 76 0 13 chr17 15200585 15200888 -70237592 - AluY SINE Alu -11 300 2 772 308 9 0 chr17 15201100 15201314 -70237166 + MIR SINE MIR 46 261 -1 203 279 59 0 chr17 15201403 15201471 -70237009 + MIR SINE MIR 118 189 -73 2492 65 0 0 chr17 15202997 15203304 -70235176 + AluY SINE Alu 1 307 -4 2215 88 3 3 chr17 15203314 15203620 -70234860 + AluSx SINE Alu 1 306 0 440 314 71 53 chr17 15203624 15204130 -70234350 + L2 LINE L2 2292 2806 -508 2184 115 3 3 chr17 15204175 15204479 -70234001 + AluSq SINE Alu 1 304 -9 21 0 0 0 chr17 15204636 15204657 -70233823 + AT_rich Low_complexity Low_complexity 1 21 0 251 286 102 62 chr17 15205193 15205281 -70233199 - L1MEd LINE L1 -2965 3164 3081 1549 134 85 19 chr17 15205281 15205588 -70232892 - L1MA4 LINE L1 -6 6294 5968 251 286 102 62 chr17 15205588 15205636 -70232844 - L1MEd LINE L1 -3048 3081 3036 2546 72 0 0 chr17 15205636 15205942 -70232538 - AluY SINE Alu -5 306 1 251 286 102 62 chr17 15205942 15206799 -70231681 - L1MEd LINE L1 -3093 3036 2130 300 345 76 48 chr17 15207095 15207593 -70230887 - L1MEd LINE L1 -5340 779 268 583 336 42 29 chr17 15210126 15210438 -70228042 - MER115 DNA AcHobo -376 317 2 182 357 0 0 chr17 15210472 15210542 -70227938 - L2 LINE L2 0 3313 3244 237 203 0 54 chr17 15210545 15210619 -70227861 - MARNA DNA Mariner -14 572 503 233 254 18 0 chr17 15210702 15210757 -70227723 + (TATATG)n Simple_repeat Simple_repeat 3 58 0 222 310 60 40 chr17 15210761 15210861 -70227619 - MIR3 SINE MIR -39 169 68 2552 33 0 3 chr17 15211889 15212191 -70226289 + L1PA5 LINE L1 5845 6145 -9 220 122 61 0 chr17 15212206 15212255 -70226225 + A-rich Low_complexity Low_complexity 2 53 0 300 325 64 32 chr17 15212531 15212719 -70225761 + L1ME LINE L1 1053 1246 -4959 181 364 0 0 chr17 15212933 15212988 -70225492 - L2 LINE L2 -18 3254 3200 1508 186 0 24 chr17 15213149 15213401 -70225079 + AluJo SINE Alu 28 273 -39 337 256 54 50 chr17 15213782 15213883 -70224597 - MER97c DNA MER1_type? -2 1088 989 2214 122 0 3 chr17 15213883 15214186 -70224294 + AluSx SINE Alu 1 302 -10 337 256 54 50 chr17 15214186 15214342 -70224138 - MER97c DNA MER1_type? -101 989 830 6267 173 36 28 chr17 15214363 15215486 -70222994 + L1MC3 LINE L1 6380 7519 -266 2255 80 3 14 chr17 15215486 15215805 -70222675 - AluSp SINE Alu 0 316 1 6267 173 36 28 chr17 15215805 15216060 -70222420 + L1MC3 LINE L1 7519 7770 -15 583 263 63 5 chr17 15216129 15216319 -70222161 - MER97a DNA MER1_type? -322 572 372 1426 169 27 4 chr17 15216346 15216607 -70221873 - Tigger3(Golem) DNA MER2_type 0 3029 2763 3582 82 8 34 chr17 15216612 15216805 -70221675 + L1PA8 LINE L1 5644 5841 -331 2295 63 3 3 chr17 15216805 15217112 -70221368 - AluY SINE Alu 0 307 1 3582 82 8 34 chr17 15217112 15217452 -70221028 + L1PA8 LINE L1 5841 6164 -8 344 269 156 19 chr17 15217472 15217632 -70220848 + L1ME LINE L1 1823 2004 -4392 281 178 178 44 chr17 15217990 15218170 -70220310 + L1ME LINE L1 2026 2229 -4167 3568 267 33 28 chr17 15218561 15219086 -70219394 + L1ME LINE L1 2387 2908 -3307 2826 16 0 0 chr17 15219086 15219399 -70219081 + AluYb8 SINE Alu 1 313 -5 3568 267 33 28 chr17 15219399 15220224 -70218256 + L1ME LINE L1 2908 3747 -2468 1734 166 0 46 chr17 15220224 15220369 -70218111 + AluJb SINE Alu 1 126 -186 2357 67 0 3 chr17 15220369 15220668 -70217812 + AluY SINE Alu 2 299 -12 1734 166 0 46 chr17 15220668 15220829 -70217651 + AluJb SINE Alu 126 293 -19 3568 267 33 28 chr17 15220829 15221003 -70217477 + L1ME LINE L1 3747 3919 -2296 1622 246 98 12 chr17 15221008 15221386 -70217094 + L1MD2 LINE L1 5733 6176 -183 318 26 0 0 chr17 15221386 15221425 -70217055 + (CA)n Simple_repeat Simple_repeat 2 40 0 1622 246 98 12 chr17 15221425 15221610 -70216870 + L1MD2 LINE L1 6176 6344 -15 370 114 14 0 chr17 15221648 15221718 -70216762 - Charlie4 DNA MER1_type -110 1851 1781 1955 237 60 47 chr17 15221727 15222584 -70215896 + L1ME LINE L1 3916 4783 -1432 1061 254 20 0 chr17 15222585 15222931 -70215549 + L1M4 LINE L1 2583 2935 -3211 380 306 33 25 chr17 15222951 15223072 -70215408 - MIR SINE MIR -113 149 28 934 251 35 0 chr17 15223218 15223421 -70215059 - MIR SINE MIR -51 211 2 23 86 0 0 chr17 15223511 15223569 -70214911 + AT_rich Low_complexity Low_complexity 1 58 0 1661 194 6 20 chr17 15223671 15224016 -70214464 + MER2 DNA MER2_type 6 345 0 2172 112 0 3 chr17 15224471 15224766 -70213714 + AluSc SINE Alu 1 294 -15 226 273 70 0 chr17 15224800 15224928 -70213552 + L1ME LINE L1 5703 5839 -351 1027 157 27 196 chr17 15227425 15227766 -70210714 - MLT1A1 LTR MaLR 0 365 113 2096 88 0 0 chr17 15227766 15228029 -70210451 - AluSc SINE Alu -33 276 14 1027 157 27 196 chr17 15228029 15228126 -70210354 - MLT1A1 LTR MaLR -252 113 1 325 319 149 37 chr17 15228239 15228741 -70209739 - L2 LINE L2 0 3313 2764 2321 113 0 0 chr17 15231018 15231329 -70207151 - AluSx SINE Alu -1 311 1 310 257 79 10 chr17 15231475 15231576 -70206904 + L2 LINE L2 3186 3293 -20 1181 170 166 106 chr17 15231696 15232146 -70206334 + MER39 LTR ERV1 4 561 -146 973 202 18 9 chr17 15232146 15232364 -70206116 - L1PA16 LINE L1 0 6166 5947 1181 170 166 106 chr17 15232364 15232521 -70205959 + MER39 LTR ERV1 561 707 0 1556 210 0 31 chr17 15234067 15234386 -70204094 + AluJb SINE Alu 1 309 -3 2498 78 0 0 chr17 15234391 15234700 -70203780 + AluY SINE Alu 1 309 -2 2024 129 0 14 chr17 15234709 15235035 -70203445 + AluSq SINE Alu 3 324 0 1336 155 12 85 chr17 15235616 15235810 -70202670 - MER33 DNA MER1_type -2261 324 164 2082 134 0 10 chr17 15235810 15236102 -70202378 + AluSx SINE Alu 1 289 -23 1336 155 12 85 chr17 15236102 15236248 -70202232 - MER33 DNA MER1_type -2421 164 9 628 207 0 57 chr17 15237896 15238036 -70200444 + FLAM_A SINE Alu 2 133 0 23 0 0 0 chr17 15238505 15238528 -70199952 + AT_rich Low_complexity Low_complexity 1 23 0 244 360 43 19 chr17 15238571 15238732 -70199748 - L2 LINE L2 -181 3091 2927 1764 181 55 5 chr17 15238918 15239362 -70199118 - MLT2B1 LTR ERVL 0 515 1 634 323 65 34 chr17 15239501 15240005 -70198475 - L2 LINE L2 -923 2391 1872 1144 103 0 36 chr17 15240054 15240241 -70198239 + AluSg/x SINE Alu 140 312 0 877 224 44 19 chr17 15240385 15240590 -70197890 + MER63A DNA MER1_type 1 210 0 196 306 45 27 chr17 15240944 15241055 -70197425 + L2 LINE L2 3199 3311 -2 2510 67 0 3 chr17 15241193 15241493 -70196987 + AluY SINE Alu 1 299 -12 314 262 131 91 chr17 15242490 15242887 -70195593 - MLT1K LTR MaLR -1 587 175 282 329 21 0 chr17 15242982 15243122 -70195358 - MIR SINE MIR -33 229 87 1987 226 110 17 chr17 15243144 15243568 -70194912 + LTR48B LTR ERV1 1 497 -147 4190 108 8 26 chr17 15243568 15243836 -70194644 - MER4A LTR ERV1 0 600 329 2136 101 3 58 chr17 15243836 15244163 -70194317 - AluSc SINE Alu 0 309 1 4190 108 8 26 chr17 15244163 15244505 -70193975 - MER4A LTR ERV1 -271 329 1 1987 226 110 17 chr17 15244505 15244669 -70193811 + LTR48B LTR ERV1 497 644 0 25 51 0 0 chr17 15245203 15245242 -70193238 + AT_rich Low_complexity Low_complexity 1 39 0 670 208 29 20 chr17 15247217 15247403 -70191077 - MER5A DNA MER1_type -1 177 1 300 250 52 52 chr17 15247407 15247523 -70190957 + MER5B DNA MER1_type 2 117 -61 2212 108 14 7 chr17 15248031 15248328 -70190152 - AluSx SINE Alu -13 299 1 509 286 105 64 chr17 15248639 15250110 -70188370 + L1P5 LINE L1 3913 5456 -700 249 139 0 0 chr17 15250146 15250189 -70188291 + (ATG)n Simple_repeat Simple_repeat 3 45 0 410 234 11 0 chr17 15250235 15250329 -70188151 - MIR SINE MIR -46 216 122 619 224 92 6 chr17 15250330 15250504 -70187976 + MER112 DNA MER1_type 71 259 -1 533 236 242 53 chr17 15251421 15251760 -70186720 + MLT1I LTR MaLR 5 407 -2 740 202 31 103 chr17 15252345 15252449 -70186031 - MER63A DNA MER1_type -1481 207 126 1559 194 27 3 chr17 15252449 15252742 -70185738 - AluJo SINE Alu -12 300 1 740 202 31 103 chr17 15252742 15252860 -70185620 - MER63A DNA MER1_type -1562 126 1 203 292 22 56 chr17 15253068 15253157 -70185323 - L2 LINE L2 -50 3263 3178 696 280 95 85 chr17 15253308 15253770 -70184710 + MLT1K LTR MaLR 66 535 -53 1331 99 103 24 chr17 15253770 15253891 -70184589 + MER30 DNA MER1_type 1 111 -119 234 0 0 0 chr17 15253891 15253917 -70184563 + (TA)n Simple_repeat Simple_repeat 2 27 0 1331 99 103 24 chr17 15253917 15254008 -70184472 + MER30 DNA MER1_type 111 230 0 696 280 95 85 chr17 15254008 15254063 -70184417 + MLT1K LTR MaLR 535 588 0 226 302 42 10 chr17 15255528 15255624 -70182856 - L1MC4 LINE L1 -1327 6715 6617 195 42 0 0 chr17 15255624 15255648 -70182832 + (TG)n Simple_repeat Simple_repeat 2 25 0 231 219 164 52 chr17 15255868 15255986 -70182494 + MIR SINE MIR 22 146 -62 281 270 126 6 chr17 15256779 15256938 -70181542 - MIR SINE MIR -24 238 61 198 307 164 0 chr17 15257087 15257227 -70181253 - MIR SINE MIR -21 241 79 2407 90 0 10 chr17 15257438 15257750 -70180730 + AluSg SINE Alu 1 309 -1 377 167 26 0 chr17 15258647 15258725 -70179755 - MER116 DNA Mariner 0 80 1 349 270 36 105 chr17 15259086 15259334 -70179146 + L2 LINE L2 2233 2463 -851 327 145 66 13 chr17 15261178 15261254 -70177226 - MER116 DNA Mariner 0 80 1 350 54 36 0 chr17 15262417 15262473 -70176007 + (TAGA)n Simple_repeat Simple_repeat 4 61 0 2214 120 0 10 chr17 15262649 15262957 -70175523 + AluSx SINE Alu 1 305 -7 2049 141 3 7 chr17 15263475 15263781 -70174699 - AluSx SINE Alu -7 305 1 736 277 96 38 chr17 15263846 15264293 -70174187 + LTR16C LTR ERVL 19 491 0 376 226 60 0 chr17 15264977 15265110 -70173370 + L1ME4a LINE L1 5965 6105 -16 334 305 52 46 chr17 15265185 15265359 -70173121 - L2 LINE L2 -36 3277 3103 1592 183 16 65 chr17 15265401 15265773 -70172707 - MLT1A1 LTR MaLR -8 357 4 2298 109 6 3 chr17 15267120 15267432 -70171048 + AluSq SINE Alu 1 313 0 2553 48 13 10 chr17 15267579 15267764 -70170716 - AluY SINE Alu 0 311 123 315 0 0 0 chr17 15267764 15267799 -70170681 + (TG)n Simple_repeat Simple_repeat 2 36 0 2553 48 13 10 chr17 15267799 15267923 -70170557 - AluY SINE Alu -188 123 1 544 241 56 12 chr17 15268111 15268273 -70170207 + L1ME1 LINE L1 5994 6162 -4 370 241 0 68 chr17 15269176 15269367 -70169113 + C-rich Low_complexity Low_complexity 2 179 0 740 287 75 47 chr17 15269503 15269667 -70168813 - LTR33 LTR ERVL -2 519 361 997 156 21 11 chr17 15269667 15269853 -70168627 + MER53 DNA DNA 1 188 -1 740 287 75 47 chr17 15269853 15270179 -70168301 - LTR33 LTR ERVL -160 361 15 2416 67 0 3 chr17 15270618 15270915 -70167565 + AluY SINE Alu 3 298 -13 200 95 0 71 chr17 15271171 15271213 -70167267 + (TTTTTG)n Simple_repeat Simple_repeat 6 44 0 2453 82 0 0 chr17 15271623 15271927 -70166553 + AluSg SINE Alu 1 304 -6 1552 189 102 23 chr17 15274139 15274493 -70163987 + MLT1B LTR MaLR 1 382 -8 1544 211 50 21 chr17 15274548 15274885 -70163595 - MLT1C LTR MaLR -9 458 112 298 164 33 0 chr17 15274889 15274950 -70163530 - L1MA9 LINE L1 -10 6302 6240 2081 124 7 0 chr17 15274959 15275279 -70163201 - AluSp SINE Alu 0 322 1 414 163 35 12 chr17 15275323 15275404 -70163076 - MLT1C LTR MaLR -343 124 42 2259 177 71 8 chr17 15275404 15275879 -70162601 + LTR27 LTR ERV1 3 574 -149 227 299 0 15 chr17 15275944 15276011 -70162469 + LTR28 LTR ERV1 954 1019 -1 279 0 0 0 chr17 15277153 15277184 -70161296 + (TG)n Simple_repeat Simple_repeat 1 31 0 213 94 0 0 chr17 15278120 15278152 -70160328 + (CAT)n Simple_repeat Simple_repeat 2 33 0 286 265 62 62 chr17 15278337 15278548 -70159932 + L1MC4a LINE L1 5719 5929 -1879 813 158 8 0 chr17 15279011 15279138 -70159342 + FLAM_A SINE Alu 1 128 -5 540 231 20 27 chr17 15279920 15280067 -70158413 + MER103 DNA DNA 1 146 -20 433 206 10 0 chr17 15280354 15280456 -70158024 + MER5A DNA MER1_type 7 109 -80 422 206 219 19 chr17 15284205 15284360 -70154120 + MER5A DNA MER1_type 4 189 0 3666 204 95 51 chr17 15284521 15284886 -70153594 + L1MD2 LINE L1 5079 5426 -933 2542 38 0 0 chr17 15284886 15285176 -70153304 + AluY SINE Alu 1 290 -21 3666 204 95 51 chr17 15285176 15285189 -70153291 + L1MD2 LINE L1 5426 5437 -922 1975 165 94 13 chr17 15285189 15285583 -70152897 + MSTB LTR MaLR 1 426 0 3666 204 95 51 chr17 15285583 15286424 -70152056 + L1MD2 LINE L1 5437 6346 -13 467 241 28 88 chr17 15286481 15286697 -70151783 + MER63A DNA MER1_type 8 210 0 209 271 47 156 chr17 15286715 15286773 -70151707 + MER5A DNA MER1_type 18 81 -108 2524 60 0 0 chr17 15286773 15287074 -70151406 + AluSc SINE Alu 1 301 -8 209 271 47 156 chr17 15287074 15287085 -70151395 + MER5A DNA MER1_type 81 92 -97 2109 88 70 0 chr17 15287085 15287369 -70151111 + AluSg SINE Alu 1 304 -6 209 271 47 156 chr17 15287369 15287490 -70150990 + MER5A DNA MER1_type 92 188 -1 865 200 28 39 chr17 15287876 15288056 -70150424 - MER5B DNA MER1_type 0 178 1 207 250 36 0 chr17 15288348 15288432 -70150048 + (TA)n Simple_repeat Simple_repeat 2 88 0 192 274 20 0 chr17 15290389 15290440 -70148040 - MIR3 SINE MIR -52 156 105 303 28 0 0 chr17 15290841 15290877 -70147603 + (A)n Simple_repeat Simple_repeat 1 36 0 183 295 90 57 chr17 15290932 15291054 -70147426 + MIR3 SINE MIR 67 192 -16 782 226 62 35 chr17 15291229 15291455 -70147025 - MER41E LTR ERV1 0 512 281 1320 172 85 108 chr17 15291476 15291979 -70146501 + MER66A LTR ERV1 99 478 0 861 270 0 14 chr17 15291979 15292169 -70146311 - MER41E LTR ERV1 -231 281 95 2115 123 47 37 chr17 15292489 15293042 -70145438 - MER51A LTR ERV1 -2 632 1 221 271 0 0 chr17 15293087 15293157 -70145323 + C-rich Low_complexity Low_complexity 1 70 0 1213 173 126 73 chr17 15293272 15293653 -70144827 + MER57A LTR ERV1 3 403 0 27 49 0 0 chr17 15294191 15294232 -70144248 + AT_rich Low_complexity Low_complexity 1 41 0 258 116 0 0 chr17 15294605 15294648 -70143832 + (TGAA)n Simple_repeat Simple_repeat 1 43 0 389 255 18 44 chr17 15296182 15296319 -70142161 + MIR3 SINE MIR 56 193 -15 253 273 0 0 chr17 15296935 15296990 -70141490 + (TG)n Simple_repeat Simple_repeat 2 56 0 308 259 25 25 chr17 15298456 15298537 -70139943 + LTR67 LTR ERVL 92 172 -385 * 674 240 53 104 chr17 15298480 15298924 -70139556 + MLT1L LTR MaLR 110 614 -1 258 291 150 0 chr17 15299134 15299261 -70139219 + MIR SINE MIR 117 262 0 339 319 63 42 chr17 15299606 15299891 -70138589 - HAL1b LINE L1 -532 816 526 1616 248 116 60 chr17 15299911 15300427 -70138053 - L2 LINE L2 -443 2871 2310 493 175 0 0 chr17 15300427 15300507 -70137973 + MADE1 DNA Mariner 1 80 0 1616 248 116 60 chr17 15300507 15300636 -70137844 - L2 LINE L2 -1004 2310 2190 2623 42 0 10 chr17 15302157 15302468 -70136012 + AluY SINE Alu 1 308 -3 2267 112 0 0 chr17 15303461 15303765 -70134715 - AluY SINE Alu -7 304 1 1109 122 59 115 chr17 15304037 15304192 -70134288 + L1MA9 LINE L1 5958 6091 -221 2575 55 3 0 chr17 15304192 15304500 -70133980 + AluY SINE Alu 1 309 -2 1109 122 59 115 chr17 15304500 15304630 -70133850 + L1MA9 LINE L1 6091 6227 -85 2478 154 31 3 chr17 15304631 15305021 -70133459 + MER57A LTR ERV1 3 403 0 5284 138 10 9 chr17 15305036 15305826 -70132654 + MER57A-int LTR ERV1 16 806 -6731 2015 110 4 0 chr17 15305819 15306083 -70132397 + MER57A-int LTR ERV1 361 625 -5321 * 5121 138 42 10 chr17 15306072 15306905 -70131575 + MER57A-int LTR ERV1 1081 1940 -4006 * 20606 79 11 5 chr17 15306898 15309589 -70128891 + MER57A-int LTR ERV1 4411 7118 -419 660 142 50 8 chr17 15309601 15309721 -70128759 + LTR54B LTR ERV1 5 129 -369 1816 97 4 37 chr17 15309723 15309992 -70128488 + MER57A-int LTR ERV1 7278 7537 0 2491 162 18 0 chr17 15309992 15310388 -70128092 + MER57A LTR ERV1 1 403 0 1970 252 69 28 chr17 15311425 15311929 -70126551 + MER21B LTR ERV1 2 526 -337 1031 318 87 20 chr17 15312084 15312717 -70125763 + L2 LINE L2 1686 2360 -954 356 252 15 59 chr17 15312722 15312857 -70125623 - LTR33 LTR ERVL 0 521 393 * 635 264 121 0 chr17 15312854 15313036 -70125444 - LTR33 LTR ERVL -315 206 3 2467 145 35 40 chr17 15313043 15313471 -70125009 - MSTB LTR MaLR 0 426 1 367 293 16 16 chr17 15313750 15313873 -70124607 + L2 LINE L2 3179 3301 -12 368 309 39 55 chr17 15314815 15314996 -70123484 - MIR SINE MIR -64 198 21 395 19 19 0 chr17 15315507 15315559 -70122921 + (CA)n Simple_repeat Simple_repeat 2 54 0 21 0 0 0 chr17 15315830 15315851 -70122629 + AT_rich Low_complexity Low_complexity 1 21 0 270 274 48 12 chr17 15315877 15315961 -70122519 - MIR SINE MIR -117 145 59 409 284 28 0 chr17 15316265 15316374 -70122106 - L2 LINE L2 -8 3305 3194 1660 232 213 89 chr17 15316382 15316964 -70121516 - MLT1E2 LTR MaLR 0 626 1 610 350 150 20 chr17 15317043 15317328 -70121152 - L2 LINE L2 -296 3017 2771 2133 125 0 0 chr17 15317328 15317617 -70120863 - AluSg1 SINE Alu -20 289 1 610 350 150 20 chr17 15317617 15317817 -70120663 - L2 LINE L2 -542 2771 2496 411 327 60 44 chr17 15318644 15319259 -70119221 - L1M4 LINE L1 -2598 3548 2914 2611 26 3 13 chr17 15319259 15319563 -70118917 + AluY SINE Alu 1 301 -10 411 327 60 44 chr17 15319563 15319796 -70118684 - L1M4 LINE L1 -3232 2914 2686 310 269 50 28 chr17 15320117 15320258 -70118222 + L1MC/D LINE L1 4903 5046 -1100 3368 134 81 10 chr17 15320573 15321065 -70117415 - MER1A DNA MER1_type 0 527 1 796 319 57 24 chr17 15321713 15322253 -70116227 + L1MC/D LINE L1 5272 5829 -302 6074 115 13 9 chr17 15322339 15323280 -70115200 + L1PA14 LINE L1 5209 6161 0 2359 98 0 0 chr17 15323780 15324075 -70114405 + AluSx SINE Alu 1 295 -17 309 318 184 21 chr17 15324575 15324686 -70113794 + L1ME LINE L1 5391 5483 -638 703 160 38 46 chr17 15324686 15324817 -70113663 + FLAM_A SINE Alu 4 133 0 309 318 184 21 chr17 15324817 15324938 -70113542 + L1ME LINE L1 5483 5661 -460 21 0 0 0 chr17 15324996 15325017 -70113463 + AT_rich Low_complexity Low_complexity 1 21 0 1783 55 0 18 chr17 15325167 15325542 -70112938 + AluY SINE Alu 70 440 0 23 0 0 0 chr17 15325959 15325982 -70112498 + AT_rich Low_complexity Low_complexity 1 23 0 323 290 143 36 chr17 15326074 15326326 -70112154 - L1M4 LINE L1 -1550 4596 4318 198 0 0 0 chr17 15326432 15326454 -70112026 + (TTTA)n Simple_repeat Simple_repeat 1 22 0 1904 97 3 80 chr17 15326454 15326754 -70111726 - AluSc SINE Alu -32 277 1 374 345 31 63 chr17 15326870 15327189 -70111291 - L1M4 LINE L1 -2244 3902 3594 403 297 36 0 chr17 15327445 15327583 -70110897 + L1ME4a LINE L1 5974 6116 -5 202 225 0 0 chr17 15328662 15328702 -70109778 + CT-rich Low_complexity Low_complexity 1 40 0 381 252 26 73 chr17 15328987 15329138 -70109342 - MIR SINE MIR -55 207 64 229 342 26 9 chr17 15329149 15329263 -70109217 + L2 LINE L2 3148 3263 -9 180 281 101 73 chr17 15329407 15329567 -70108913 + L2 LINE L2 3130 3297 -16 2186 93 0 7 chr17 15329567 15329857 -70108623 + AluSq SINE Alu 1 288 -25 180 281 101 73 chr17 15329857 15329874 -70108606 + L2 LINE L2 3297 3312 -1 2349 64 3 10 chr17 15329980 15330277 -70108203 + AluSg SINE Alu 1 295 -15 251 266 133 58 chr17 15330641 15330829 -70107651 - MIR3 SINE MIR -4 204 3 482 273 84 26 chr17 15331902 15332056 -70106424 - MLT1L LTR MaLR -43 572 410 417 223 36 18 chr17 15332093 15332205 -70106275 - MLT1L LTR MaLR -298 317 204 274 191 48 16 chr17 15332178 15332241 -70106239 - MLT1J LTR MaLR -344 167 103 * 189 171 0 0 chr17 15332476 15332511 -70105969 + (CA)n Simple_repeat Simple_repeat 2 36 0 241 133 0 0 chr17 15332515 15332560 -70105920 - L1MC4 LINE L1 -1339 6703 6659 564 174 11 49 chr17 15332588 15332772 -70105708 + (CATATA)n Simple_repeat Simple_repeat 1 177 0 406 344 31 0 chr17 15332783 15332911 -70105569 - L2 LINE L2 0 3313 3182 211 233 0 0 chr17 15334165 15334208 -70104272 + MIR SINE MIR 88 130 -132 2434 59 0 23 chr17 15334208 15334574 -70103906 - AluY SINE Alu 0 359 1 204 293 61 30 chr17 15335325 15335424 -70103056 + L2 LINE L2 3150 3251 -62 215 169 0 68 chr17 15335686 15335745 -70102735 + A-rich Low_complexity Low_complexity 3 57 0 527 281 106 21 chr17 15335775 15336202 -70102278 + L1MC/D LINE L1 5265 5723 -689 1821 125 0 55 chr17 15336362 15336651 -70101829 + AluSx SINE Alu 39 311 -1 736 251 6 27 chr17 15337239 15337422 -70101058 + MER63A DNA MER1_type 24 202 -8 910 253 71 65 chr17 15337558 15338098 -70100382 + MER39 LTR ERV1 6 707 0 1762 175 0 7 chr17 15338259 15338567 -70099913 + AluJb SINE Alu 1 306 -6 189 0 0 0 chr17 15339384 15339405 -70099075 + (A)n Simple_repeat Simple_repeat 1 21 0 210 339 12 29 chr17 15339997 15340135 -70098345 + MIR SINE MIR 5 140 -68 2313 53 9 40 chr17 15340199 15340520 -70097960 - AluY SINE Alu 0 311 1 2733 140 37 18 chr17 15341119 15341576 -70096904 + LTR39 LTR ERV1 3 468 -315 461 169 0 36 chr17 15341578 15341661 -70096819 + LTR39 LTR ERV1 704 783 0 192 40 0 0 chr17 15341680 15341705 -70096775 + (GTTTG)n Simple_repeat Simple_repeat 5 29 0 1015 197 106 8 chr17 15341928 15342065 -70096415 - L1MA9 LINE L1 -3 6309 6187 339 78 0 0 chr17 15342065 15342116 -70096364 + (TG)n Simple_repeat Simple_repeat 2 52 0 1015 197 106 8 chr17 15342116 15342242 -70096238 - L1MA9 LINE L1 -125 6187 6020 2743 145 18 35 chr17 15342549 15342836 -70095644 + MER31A LTR ERV1 1 278 -207 2244 58 41 3 chr17 15342836 15343128 -70095352 - AluY SINE Alu -8 303 1 2743 145 18 35 chr17 15343128 15343329 -70095151 + MER31A LTR ERV1 278 481 -4 1558 183 31 9 chr17 15343770 15344087 -70094393 + L1MA3 LINE L1 5978 6301 -4 21 0 0 0 chr17 15344151 15344172 -70094308 + AT_rich Low_complexity Low_complexity 1 21 0 265 211 0 0 chr17 15344603 15344655 -70093825 + MER72 LTR ERV1 410 461 -261 549 192 103 51 chr17 15344697 15344911 -70093569 + LTR45B LTR ERV1 264 488 -1 634 267 41 23 chr17 15344920 15345092 -70093388 + LTR33 LTR ERVL 101 275 -246 273 208 0 0 chr17 15345198 15345251 -70093229 + LTR33 LTR ERVL 469 521 0 330 347 67 51 chr17 15345251 15345582 -70092898 - L1M4 LINE L1 -2489 3657 3322 826 336 59 29 chr17 15345698 15346145 -70092335 + LTR67 LTR ERVL 9 476 -81 1895 191 18 25 chr17 15346145 15346538 -70091942 + MLT1B LTR MaLR 1 390 0 826 336 59 29 chr17 15346538 15346617 -70091863 + LTR67 LTR ERVL 476 551 -6 2408 252 49 60 chr17 15346645 15347029 -70091451 + L1ME LINE L1 6 393 -5677 2306 81 0 7 chr17 15347029 15347339 -70091141 + AluY SINE Alu 1 308 -3 2408 252 49 60 chr17 15347339 15347850 -70090630 + L1ME LINE L1 393 891 -5179 2297 87 3 3 chr17 15347971 15348280 -70090200 + AluSg1 SINE Alu 1 309 0 881 118 0 37 chr17 15350417 15350500 -70087980 - FLAM_C SINE Alu -181 131 53 4630 138 35 17 chr17 15350500 15351271 -70087209 - LTR1 LTR ERV1 0 785 1 881 118 0 37 chr17 15351271 15351323 -70087157 - FLAM_C SINE Alu -259 53 1 504 262 89 76 chr17 15351514 15351976 -70086504 + MLT1K LTR MaLR 5 472 -4 329 278 21 10 chr17 15352163 15352260 -70086220 - MIR SINE MIR 0 262 165 229 211 88 0 chr17 15352263 15352320 -70086160 - MIR SINE MIR -75 187 126 195 374 30 30 chr17 15352789 15352861 -70085619 - L2 LINE L2 -220 3052 2978 321 47 0 0 chr17 15352861 15352904 -70085576 + (TG)n Simple_repeat Simple_repeat 2 44 0 195 374 30 30 chr17 15352904 15352962 -70085518 - L2 LINE L2 -293 2979 2922 2445 56 3 0 chr17 15352969 15353272 -70085208 - AluY SINE Alu -7 304 1 1294 222 52 48 chr17 15353276 15353794 -70084686 + MLT1F1 LTR MaLR 1 593 0 463 323 24 12 chr17 15353860 15354027 -70084453 - MER5A DNA MER1_type -13 176 8 369 327 19 19 chr17 15354346 15354505 -70083975 + MARNA DNA Mariner 40 198 -388 202 284 45 0 chr17 15354585 15354652 -70083828 - MIR3 SINE MIR -41 167 98 2072 116 7 7 chr17 15355147 15355448 -70083032 - AluSx SINE Alu -11 301 1 1173 219 17 41 chr17 15355680 15355972 -70082508 + LTR16C LTR ERVL 207 491 0 589 256 152 105 chr17 15356270 15356699 -70081781 + L2 LINE L2 2725 3132 -181 2236 85 0 3 chr17 15356699 15357004 -70081476 + AluY SINE Alu 1 304 -7 589 256 152 105 chr17 15357004 15357054 -70081426 + L2 LINE L2 3132 3178 -135 2023 90 20 17 chr17 15357054 15357353 -70081127 - AluSq SINE Alu -1 312 13 589 256 152 105 chr17 15357353 15357447 -70081033 + L2 LINE L2 3178 3309 -4 418 274 83 6 chr17 15357537 15357694 -70080786 - L1MC4a LINE L1 -1945 5863 5695 296 378 0 0 chr17 15357737 15357848 -70080632 - L1MC4a LINE L1 -529 5592 5482 * 2172 56 0 6 chr17 15357834 15357852 -70080628 + L1PA8 LINE L1 5698 5715 -457 995 61 7 41 chr17 15357852 15357999 -70080481 - L1PA8 LINE L1 -5 6167 6026 2172 56 0 6 chr17 15357999 15358267 -70080213 + L1PA8 LINE L1 5715 5981 -191 1706 66 4 85 chr17 15358267 15358322 -70080158 + L1P LINE L1 5132 5190 -956 1777 79 12 8 chr17 15358322 15358563 -70079917 + AluY SINE Alu 16 257 -54 1706 66 4 85 chr17 15358563 15358576 -70079904 + L1P LINE L1 5190 5202 -944 198 0 0 0 chr17 15358576 15358598 -70079882 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 1706 66 4 85 chr17 15358598 15358799 -70079681 + L1P LINE L1 5202 5380 -766 856 308 76 50 chr17 15358854 15359509 -70078971 - L1MC4a LINE L1 -752 5394 4723 395 252 25 17 chr17 15361246 15361365 -70077115 - MIR SINE MIR -14 248 129 651 235 44 49 chr17 15361434 15361617 -70076863 - MER63A DNA MER1_type -2 208 27 2294 61 0 3 chr17 15361719 15362012 -70076468 - AluY SINE Alu -17 294 3 2098 119 0 0 chr17 15362092 15362386 -70076094 + AluSx SINE Alu 3 296 -16 264 329 102 22 chr17 15364066 15364203 -70074277 + L3 LINE CR1 1427 1574 -3 216 263 105 79 chr17 15364362 15364514 -70073966 + L2 LINE L2 3126 3281 -32 1534 182 40 85 chr17 15366330 15366731 -70071749 + MLT1B LTR MaLR 8 390 0 27 0 0 0 chr17 15367659 15367686 -70070794 + AT_rich Low_complexity Low_complexity 1 27 0 1614 165 26 10 chr17 15367829 15368132 -70070348 - AluJb SINE Alu -4 308 1 325 280 120 47 chr17 15368210 15368360 -70070120 - HAL1b LINE L1 0 1348 1188 246 32 0 0 chr17 15369710 15369741 -70068739 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2598 136 56 21 chr17 15370269 15370314 -70068166 - L1MB3 LINE L1 -7 6176 6134 1830 151 3 22 chr17 15370314 15370632 -70067848 - 7SLRNA srpRNA srpRNA -8 312 1 2598 136 56 21 chr17 15370632 15370915 -70067565 - L1MB3 LINE L1 -49 6134 5823 2161 106 7 0 chr17 15370915 15371218 -70067262 - AluSx SINE Alu -6 306 2 2598 136 56 21 chr17 15371218 15371367 -70067113 - L1MB3 LINE L1 -360 5823 5681 316 109 0 0 chr17 15371379 15371425 -70067055 - L1MD2 LINE L1 -25 6334 6289 500 180 150 0 chr17 15371430 15371530 -70066950 - L1MD2 LINE L1 -208 6151 6037 838 206 66 66 chr17 15371927 15372228 -70066252 - MER33 DNA MER1_type 0 324 24 341 227 80 0 chr17 15373199 15373274 -70065206 + Tigger3(Golem) DNA MER2_type 1 81 -2948 * 581 202 0 0 chr17 15373272 15373366 -70065114 + Tigger3(Golem) DNA MER2_type 2919 3012 -17 441 252 10 0 chr17 15373374 15373477 -70065003 + Charlie5 DNA MER1_type 2481 2584 -28 517 274 60 35 chr17 15373496 15373645 -70064835 + MIR3 SINE MIR 17 169 -39 203 275 14 29 chr17 15374664 15374733 -70063747 - MIR SINE MIR -187 75 8 2288 117 17 50 chr17 15374808 15375211 -70063269 - MLT1B LTR MaLR 0 390 1 365 343 161 16 chr17 15376005 15376428 -70062052 + L2 LINE L2 2371 2854 -460 273 384 75 31 chr17 15376488 15376589 -70061891 + L2 LINE L2 2966 3061 -211 8238 111 9 46 chr17 15376589 15377741 -70060739 + HSMAR2 DNA Mariner 2 1195 -107 2308 88 7 3 chr17 15377741 15378048 -70060432 + AluSx SINE Alu 1 308 -4 8238 111 9 46 chr17 15378048 15378088 -70060392 + HSMAR2 DNA Mariner 1195 1235 -67 2422 58 0 19 chr17 15378088 15378399 -70060081 - AluY SINE Alu -6 305 1 8238 111 9 46 chr17 15378399 15378554 -70059926 + HSMAR2 DNA Mariner 1235 1300 -2 273 384 75 31 chr17 15378554 15378746 -70059734 + L2 LINE L2 3061 3272 0 333 0 0 0 chr17 15378863 15378900 -70059580 + (TTTA)n Simple_repeat Simple_repeat 3 39 0 1738 138 4 14 chr17 15378916 15379191 -70059289 - AluSx SINE Alu -28 284 13 1320 261 80 39 chr17 15379950 15380437 -70058043 + HAL1 LINE L1 1 507 -2000 2046 125 3 3 chr17 15381423 15381775 -70056705 - AluSx SINE Alu 0 352 1 268 98 0 273 chr17 15382098 15382174 -70056306 - L1MB3 LINE L1 0 6183 6156 2404 70 0 10 chr17 15382174 15382487 -70055993 - AluY SINE Alu -1 310 1 268 98 0 273 chr17 15382487 15382542 -70055938 - L1MB3 LINE L1 -27 6156 6088 1407 107 5 0 chr17 15383010 15383227 -70055253 + AluSq SINE Alu 87 304 0 301 174 174 0 chr17 15383265 15383334 -70055146 + MIR SINE MIR 110 190 -72 669 278 55 93 chr17 15384355 15384643 -70053837 + MLT1J LTR MaLR 33 307 -204 2146 107 0 0 chr17 15384643 15384933 -70053547 - AluSg SINE Alu -20 290 1 669 278 55 93 chr17 15384933 15384989 -70053491 + MLT1J LTR MaLR 307 364 -147 183 353 82 55 chr17 15385115 15385370 -70053110 - L2 LINE L2 -337 2977 2716 272 311 39 0 chr17 15386355 15386458 -70052022 + MIR3 SINE MIR 99 205 -3 2366 187 24 2 chr17 15386951 15387368 -70051112 - MSTB LTR MaLR 0 426 1 295 344 30 23 chr17 15388518 15388649 -70049831 + L2 LINE L2 2965 3096 -176 1305 232 87 65 chr17 15389530 15390022 -70048458 - MLT1J LTR MaLR -8 503 1 314 204 174 23 chr17 15391045 15391130 -70047350 - L1MA10 LINE L1 -5 6329 6245 1408 197 51 120 chr17 15391130 15391662 -70046818 - L1ME1 LINE L1 -101 6065 5571 * 4894 176 69 26 chr17 15391644 15392359 -70046121 - L1MD2 LINE L1 -2 6357 5575 2339 64 37 0 chr17 15392359 15392654 -70045826 + AluSc SINE Alu 1 306 -3 4894 176 69 26 chr17 15392654 15393062 -70045418 - L1MD2 LINE L1 -784 5575 5186 1595 192 46 8 chr17 15393064 15393454 -70045026 - L1ME1 LINE L1 -562 5604 5206 236 229 106 59 chr17 15393779 15393949 -70044531 - L1M4 LINE L1 -765 5381 5204 642 145 0 86 chr17 15393971 15394088 -70044392 - AluJo SINE Alu -177 135 29 258 105 0 0 chr17 15394097 15394135 -70044345 + (T)n Simple_repeat Simple_repeat 1 38 0 327 314 47 52 chr17 15394320 15394492 -70043988 + MIR3 SINE MIR 20 190 -18 391 273 62 3 chr17 15394746 15394881 -70043599 + MIR SINE MIR 2 142 -66 664 269 63 47 chr17 15395052 15395353 -70043127 + L1ME4a LINE L1 5521 5826 -295 461 272 82 6 chr17 15395356 15395514 -70042966 + MIR SINE MIR 3 172 -90 506 272 71 28 chr17 15395911 15396136 -70042344 - MIR SINE MIR 0 262 31 245 266 101 9 chr17 15396366 15396475 -70042005 - MER117 DNA MER1_type -78 119 1 717 319 76 0 chr17 15397479 15397717 -70040763 - MIR SINE MIR -6 256 1 1903 225 67 44 chr17 15397748 15397828 -70040652 - MER82 DNA MER2_type 0 653 576 2235 85 0 36 chr17 15397828 15398133 -70040347 + AluY SINE Alu 1 294 -17 1903 225 67 44 chr17 15398133 15398603 -70039877 - MER82 DNA MER2_type -77 576 90 2281 108 0 9 chr17 15398740 15399056 -70039424 + AluSq SINE Alu 1 313 0 2448 65 0 23 chr17 15399316 15399622 -70038858 - AluY SINE Alu -12 299 1 204 306 115 87 chr17 15400373 15400556 -70037924 - MIR SINE MIR -33 229 42 349 244 118 17 chr17 15400623 15400742 -70037738 + MIR SINE MIR 34 164 -98 2340 94 3 0 chr17 15402209 15402518 -70035962 + AluSp SINE Alu 1 310 -3 2701 139 45 9 chr17 15402822 15403269 -70035211 - L1MB3 LINE L1 -4 6179 5717 237 301 4 111 chr17 15403719 15403981 -70034499 + HAL1 LINE L1 105 338 -2169 1022 247 113 111 chr17 15404309 15404759 -70033721 + HAL1 LINE L1 767 1220 -1287 2368 99 3 0 chr17 15404759 15405062 -70033418 - AluSx SINE Alu -8 304 1 1022 247 113 111 chr17 15405062 15405491 -70032989 + HAL1 LINE L1 1220 1647 -860 734 226 14 7 chr17 15405492 15405638 -70032842 + Tigger3(Golem) DNA MER2_type 1 147 -2882 * 5791 122 39 34 chr17 15405610 15405978 -70032502 + Tigger3(Golem) DNA MER2_type 2041 2406 -623 2315 101 3 0 chr17 15405978 15406275 -70032205 - AluSp SINE Alu -15 298 1 5791 122 39 34 chr17 15406275 15406404 -70032076 + Tigger3(Golem) DNA MER2_type 2406 2533 -496 2393 62 0 16 chr17 15406404 15406712 -70031768 - AluY SINE Alu -8 303 1 5791 122 39 34 chr17 15406712 15407196 -70031284 + Tigger3(Golem) DNA MER2_type 2533 3028 -1 317 271 26 65 chr17 15407210 15407365 -70031115 + HAL1 LINE L1 1660 1808 -699 24 0 0 0 chr17 15407558 15407582 -70030898 + AT_rich Low_complexity Low_complexity 1 24 0 268 261 106 43 chr17 15407584 15407772 -70030708 + HAL1 LINE L1 2099 2298 -209 24 50 0 33 chr17 15407833 15407868 -70030612 + AT_rich Low_complexity Low_complexity 1 35 -23 2054 109 51 0 chr17 15407868 15408162 -70030318 + AluSq SINE Alu 1 309 -4 24 50 0 33 chr17 15408162 15408186 -70030294 + AT_rich Low_complexity Low_complexity 35 58 0 267 294 77 0 chr17 15408192 15408335 -70030145 + L1MC4a LINE L1 3821 3974 -2172 1831 154 62 22 chr17 15408354 15408678 -70029802 + MER1B DNA MER1_type 1 337 0 383 254 175 87 chr17 15408885 15409515 -70028965 + L1MC4a LINE L1 5269 5418 -733 1981 93 0 0 chr17 15409635 15409883 -70028597 - AluY SINE Alu -21 290 43 442 311 50 31 chr17 15410494 15410655 -70027825 + MIR3 SINE MIR 36 199 -9 2210 100 3 7 chr17 15411055 15411356 -70027124 + AluSx SINE Alu 1 300 -12 2176 115 3 3 chr17 15411551 15411856 -70026624 + AluSx SINE Alu 1 305 -7 3168 239 9 24 chr17 15411862 15412660 -70025820 - L1M4 LINE L1 -1681 4465 3680 401 306 61 5 chr17 15413014 15413078 -70025402 - MER5A DNA MER1_type -1 188 129 2161 70 56 0 chr17 15413078 15413363 -70025117 + AluYa5 SINE Alu 1 301 -10 401 306 61 5 chr17 15413363 15413470 -70025010 - MER5A DNA MER1_type -60 129 6 1896 108 31 83 chr17 15413549 15413874 -70024606 + AluSg SINE Alu 1 308 -2 2405 94 0 0 chr17 15414727 15415025 -70023455 - AluSg SINE Alu -12 298 1 463 121 0 0 chr17 15415477 15415543 -70022937 - L1MA3 LINE L1 -1 6304 6239 1004 113 0 0 chr17 15415543 15415693 -70022787 - L1MA2 LINE L1 -109 6195 6046 2195 206 93 65 chr17 15415696 15415877 -70022603 - Charlie2 DNA MER1_type -72 2790 2616 2147 54 8 0 chr17 15415877 15416162 -70022318 + AluY SINE Alu 22 308 0 2195 206 93 65 chr17 15416162 15416888 -70021592 - Charlie2 DNA MER1_type -246 2616 1856 350 288 204 12 chr17 15416888 15417138 -70021342 - Charlie2 DNA MER1_type -2536 326 29 270 256 51 0 chr17 15417891 15417969 -70020511 - MIR SINE MIR -70 192 111 205 171 0 0 chr17 15417969 15418004 -70020476 + T-rich Low_complexity Low_complexity 3 37 0 38857 46 4 1 chr17 15418140 15418151 -70020329 - L1PA5 LINE L1 -4 6150 6141 486 49 0 0 chr17 15418151 15418212 -70020268 + (TA)n Simple_repeat Simple_repeat 2 62 0 38857 46 4 1 chr17 15418212 15423715 -70014765 - L1PA5 LINE L1 -13 6141 623 693 70 0 0 chr17 15423715 15423801 -70014679 - L1PA5 LINE L1 -6050 96 11 244 313 9 61 chr17 15423807 15423922 -70014558 - MIR3 SINE MIR -90 118 10 185 193 0 35 chr17 15424706 15424763 -70013717 + (TATG)n Simple_repeat Simple_repeat 2 56 0 430 215 65 9 chr17 15425186 15425293 -70013187 + MIR3 SINE MIR 87 199 -9 399 295 11 0 chr17 15425663 15425758 -70012722 + MER5A DNA MER1_type 70 165 -24 832 305 60 42 chr17 15427056 15427538 -70010942 - LTR16C LTR ERVL 0 491 1 4034 182 78 3 chr17 15428181 15428562 -70009918 + MER63C DNA MER1_type 16 367 -693 198 0 0 0 chr17 15428562 15428584 -70009896 + (TG)n Simple_repeat Simple_repeat 1 22 0 4034 182 78 3 chr17 15428584 15429054 -70009426 + MER63C DNA MER1_type 367 930 0 528 223 122 32 chr17 15430289 15430477 -70008003 + MIR SINE MIR 20 224 -38 259 340 21 31 chr17 15430491 15430588 -70007892 - L2 LINE L2 -72 3200 3105 236 277 15 15 chr17 15430670 15430735 -70007745 + MIR SINE MIR 84 148 -114 225 266 16 64 chr17 15431415 15431603 -70006877 + C-rich Low_complexity Low_complexity 1 179 0 1440 193 92 13 chr17 15431610 15431926 -70006554 - MER2 DNA MER2_type -3 342 2 237 33 0 0 chr17 15431985 15432015 -70006465 + (CA)n Simple_repeat Simple_repeat 1 30 0 330 291 0 0 chr17 15432315 15432418 -70006062 - MER103 DNA DNA -63 103 1 653 286 34 50 chr17 15433251 15433513 -70004967 + MIR SINE MIR 5 262 0 326 245 22 86 chr17 15434538 15434606 -70003874 - L2 LINE L2 -367 2947 2890 2085 108 3 11 chr17 15434606 15434924 -70003556 + AluSp SINE Alu 1 316 0 326 245 22 86 chr17 15434924 15434993 -70003487 - L2 LINE L2 -424 2890 2818 435 259 9 9 chr17 15435384 15435492 -70002988 - L2 LINE L2 -5 3267 3160 348 258 114 34 chr17 15436675 15436860 -70001620 + MIR SINE MIR 31 226 -36 1972 73 48 48 chr17 15438459 15438748 -69999732 - AluSg SINE Alu -21 289 1 746 248 112 10 chr17 15438780 15439074 -69999406 - L1ME3A LINE L1 -326 5913 5590 1964 195 50 8 chr17 15439654 15440034 -69998446 - MSTD LTR MaLR 0 396 1 2133 61 13 55 chr17 15440200 15440511 -69997969 + AluY SINE Alu 1 298 -13 934 259 4 4 chr17 15440587 15440826 -69997654 - L1ME3A LINE L1 -2561 3654 3416 * 1278 251 113 34 chr17 15440814 15441146 -69997334 - L1MDa LINE L1 -3518 2697 2331 2384 94 0 0 chr17 15441146 15441454 -69997026 - AluSg1 SINE Alu -1 308 1 1278 251 113 34 chr17 15441454 15441698 -69996782 - L1MDa LINE L1 -3884 2331 2108 1580 188 141 44 chr17 15441743 15442217 -69996263 - Charlie1b DNA MER1_type 0 523 4 1929 266 65 27 chr17 15442217 15442873 -69995607 - L1MDa LINE L1 -4328 2068 1318 267 103 0 0 chr17 15442873 15442912 -69995568 + (TG)n Simple_repeat Simple_repeat 2 40 0 1929 266 65 27 chr17 15442912 15443103 -69995377 - L1MDa LINE L1 -5078 1318 1136 1531 301 117 22 chr17 15443130 15444130 -69994350 - L1MDa LINE L1 -5300 1096 2 1658 152 48 24 chr17 15444661 15444951 -69993529 + AluJb SINE Alu 1 297 -15 2215 74 0 14 chr17 15444953 15445293 -69993187 + AluY SINE Alu 1 336 0 233 238 24 24 chr17 15445902 15445986 -69992494 + L1MC/D LINE L1 5799 5882 -1926 184 291 47 23 chr17 15446255 15446341 -69992139 - MIR SINE MIR -10 252 165 565 209 0 26 chr17 15446536 15446651 -69991829 - MIR SINE MIR -81 181 70 349 274 130 7 chr17 15446653 15446799 -69991681 - L1MEc LINE L1 -6194 202 39 195 42 0 0 chr17 15446799 15446823 -69991657 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 1414 120 9 60 chr17 15446826 15447059 -69991421 - AluSx SINE Alu -31 281 61 2797 135 29 5 chr17 15448301 15448717 -69989763 - MSTA LTR MaLR 0 428 3 617 319 72 16 chr17 15449732 15450052 -69988428 + L1ME LINE L1 5333 5670 -451 230 280 121 8 chr17 15450087 15450219 -69988261 - L1ME LINE L1 -205 5916 5770 657 253 39 91 chr17 15451396 15451485 -69986995 - L1ME4a LINE L1 -196 5925 5833 2274 108 7 0 chr17 15451485 15451780 -69986700 - AluSq SINE Alu -16 297 1 657 253 39 91 chr17 15451780 15452074 -69986406 - L1ME4a LINE L1 -288 5833 5562 737 246 18 12 chr17 15453385 15453556 -69984924 - MER5B DNA MER1_type -1 177 6 2995 206 51 19 chr17 15453567 15454289 -69984191 + L1MB8 LINE L1 4458 5202 -944 684 279 91 29 chr17 15454283 15454797 -69983683 + L1PB1 LINE L1 5248 5880 -271 * 3408 196 30 22 chr17 15454362 15455096 -69983384 + L1MB8 LINE L1 5433 6172 -6 205 312 65 13 chr17 15456690 15456767 -69981713 - MIR SINE MIR -162 100 20 498 281 39 6 chr17 15456796 15456974 -69981506 - L1PB4 LINE L1 -12 6144 5961 2457 75 0 0 chr17 15457707 15458002 -69980478 + AluY SINE Alu 1 295 -16 418 286 106 42 chr17 15458431 15458788 -69979692 + L1ME LINE L1 5024 5403 -743 327 276 103 39 chr17 15458841 15458997 -69979483 + L1ME LINE L1 5455 5620 -501 752 129 8 32 chr17 15460065 15460189 -69978291 + L1MA3 LINE L1 6180 6300 -5 1495 172 8 27 chr17 15460210 15460471 -69978009 + AluJo SINE Alu 35 290 -22 25 0 0 0 chr17 15460508 15460533 -69977947 + AT_rich Low_complexity Low_complexity 1 25 0 2618 64 0 0 chr17 15460727 15461038 -69977442 + AluY SINE Alu 1 311 0 647 246 34 6 chr17 15462401 15462580 -69975900 - L1PB4 LINE L1 -12 6144 5961 199 333 45 10 chr17 15462974 15463075 -69975405 - MIR SINE MIR -65 143 53 203 203 25 101 chr17 15463077 15463156 -69975324 - L2 LINE L2 0 3272 3200 1362 274 165 18 chr17 15463167 15463725 -69974755 + L2 LINE L2 2187 2826 -488 577 298 130 14 chr17 15463712 15463997 -69974483 + L2 LINE L2 2991 3308 -5 * 2287 102 10 0 chr17 15465209 15465512 -69972968 + AluSx SINE Alu 1 306 -6 234 163 102 0 chr17 15465700 15465749 -69972731 - L1MB8 LINE L1 -8 6170 6117 664 293 96 43 chr17 15465784 15466224 -69972256 - L1ME4a LINE L1 -280 5841 5379 1220 109 20 30 chr17 15467361 15467562 -69970918 - L1MA5A LINE L1 -4 6293 6095 826 93 0 19 chr17 15467562 15467670 -69970810 - U6 snRNA snRNA 0 107 2 202 134 119 104 chr17 15468254 15468284 -69970196 - L2 LINE L2 -1 3271 3243 2298 127 7 74 chr17 15468284 15468702 -69969778 - MLT1B LTR MaLR 0 390 1 202 134 119 104 chr17 15468702 15468738 -69969742 - L2 LINE L2 -29 3243 3204 412 182 98 53 chr17 15469568 15469700 -69968780 - MER69A DNA AcHobo -32 145 8 619 238 14 24 chr17 15469819 15470019 -69968461 + MER63 DNA MER1_type 1 1678 -10 1022 120 57 31 chr17 15470463 15470655 -69967825 + L1MB3 LINE L1 5986 6182 -1 228 328 0 0 chr17 15470909 15470970 -69967510 - L3b LINE CR1 -242 1341 1281 243 213 0 49 chr17 15471441 15471502 -69966978 + (ATG)n Simple_repeat Simple_repeat 2 59 0 377 295 40 10 chr17 15471561 15471710 -69966770 - MIR SINE MIR -48 160 4 360 0 0 0 chr17 15472886 15472926 -69965554 + (CA)n Simple_repeat Simple_repeat 1 40 0 257 344 28 56 chr17 15474026 15474276 -69964204 - L2 LINE L2 -132 3140 2898 323 245 11 32 chr17 15474488 15474582 -69963898 + MIR3 SINE MIR 112 203 -5 21 36 0 0 chr17 15474697 15474725 -69963755 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr17 15475943 15475964 -69962516 + AT_rich Low_complexity Low_complexity 1 21 0 233 341 11 0 chr17 15477446 15477534 -69960946 + MER117 DNA MER1_type 1 89 -108 1497 176 0 4 chr17 15477637 15477881 -69960599 + AluJo SINE Alu 32 274 -38 996 252 231 9 chr17 15478790 15479247 -69959233 + MLT1G LTR MaLR 35 587 -3 2881 10 0 3 chr17 15479401 15479714 -69958766 - AluYb8 SINE Alu -6 312 1 309 326 136 16 chr17 15479969 15480153 -69958327 - MIR SINE MIR -55 207 2 21 0 0 0 chr17 15480263 15480284 -69958196 + AT_rich Low_complexity Low_complexity 1 21 0 553 277 130 28 chr17 15480647 15480900 -69957580 + MLT1I LTR MaLR 131 409 0 2293 98 3 13 chr17 15481060 15481367 -69957113 + AluSp SINE Alu 1 304 -9 26 50 0 0 chr17 15482750 15482790 -69955690 + AT_rich Low_complexity Low_complexity 1 40 0 21 36 0 0 chr17 15482825 15482853 -69955627 + AT_rich Low_complexity Low_complexity 1 28 0 449 331 73 59 chr17 15483417 15483758 -69954722 - L2 LINE L2 0 3272 2927 735 140 158 117 chr17 15483794 15483878 -69954602 + MER45A DNA AcHobo 1 80 -1501 2129 131 3 0 chr17 15483878 15484176 -69954304 - AluSx SINE Alu -13 299 1 735 140 158 117 chr17 15484176 15484262 -69954218 + MER45A DNA AcHobo 80 178 0 223 270 81 27 chr17 15484269 15484380 -69954100 - L2 LINE L2 -549 2765 2649 1750 73 162 4 chr17 15484657 15484916 -69953564 + AluYa8 SINE Alu 1 300 0 566 188 10 0 chr17 15485285 15485381 -69953099 + MER3 DNA MER1_type 1 97 -112 200 358 37 9 chr17 15485405 15485514 -69952966 - MIR SINE MIR -78 130 19 202 345 11 23 chr17 15485926 15486013 -69952467 - MIR SINE MIR -148 114 29 2141 151 89 25 chr17 15486470 15486874 -69951606 - MSTB1 LTR MaLR 0 432 3 231 228 88 0 chr17 15487517 15487574 -69950906 + L1M4 LINE L1 4785 4846 -1300 807 172 0 8 chr17 15488302 15488436 -69950044 + FLAM_C SINE Alu 1 133 -10 2289 96 0 3 chr17 15488700 15488992 -69949488 - AluSc SINE Alu -18 291 1 833 271 207 18 chr17 15489383 15489726 -69948754 - MLT1I LTR MaLR -1 408 1 620 244 49 19 chr17 15491318 15491523 -69946957 + L1M4 LINE L1 5111 5321 -825 2436 143 16 0 chr17 15491935 15492314 -69946166 + MLT1B LTR MaLR 6 390 0 1716 161 29 0 chr17 15492385 15492659 -69945821 + AluJo SINE Alu 1 282 -30 507 33 0 0 chr17 15492662 15492723 -69945757 + (TAAAA)n Simple_repeat Simple_repeat 2 62 0 1189 228 71 15 chr17 15493655 15493980 -69944500 + MER2 DNA MER2_type 2 344 0 279 193 117 105 chr17 15494447 15494618 -69943862 - L2 LINE L2 0 3313 3141 4098 243 88 33 chr17 15495241 15495580 -69942900 + L1MEc LINE L1 36 355 -6041 180 0 0 0 chr17 15495580 15495600 -69942880 + (GA)n Simple_repeat Simple_repeat 1 20 0 4098 243 88 33 chr17 15495600 15496347 -69942133 + L1MEc LINE L1 355 1060 -5336 1778 145 0 0 chr17 15496347 15496623 -69941857 + AluSx SINE Alu 29 304 -8 4098 243 88 33 chr17 15496623 15496659 -69941821 + L1MEc LINE L1 1060 1093 -5303 351 0 0 0 chr17 15496659 15496698 -69941782 + (TG)n Simple_repeat Simple_repeat 2 40 0 4098 243 88 33 chr17 15496698 15496955 -69941525 + L1MEc LINE L1 1093 1335 -5061 827 233 23 6 chr17 15496955 15497127 -69941353 + MER45A DNA AcHobo 1 175 -3 4098 243 88 33 chr17 15497127 15497283 -69941197 + L1MEc LINE L1 1335 1658 -4738 233 256 0 39 chr17 15497273 15497351 -69941129 + L1MA10 LINE L1 6258 6332 -2 * 436 262 65 0 chr17 15497522 15497629 -69940851 + LTR16C LTR ERVL 120 233 -258 838 210 0 0 chr17 15497730 15497892 -69940588 + L1MEc LINE L1 650 811 -5585 332 313 6 62 chr17 15497944 15498123 -69940357 + LTR16C LTR ERVL 323 491 0 1052 212 51 10 chr17 15498325 15498636 -69939844 + MER33 DNA MER1_type 1 319 -5 540 258 74 46 chr17 15499518 15499851 -69938629 + MLT1J2 LTR MaLR 70 450 0 540 309 49 45 chr17 15499864 15500087 -69938393 - Charlie8 DNA MER1_type -2190 227 4 551 267 6 72 chr17 15500357 15500596 -69937884 - LTR16A1 LTR ERVL 0 457 251 197 283 0 0 chr17 15500961 15501007 -69937473 + MIR SINE MIR 78 123 -139 1297 194 89 31 chr17 15501021 15501346 -69937134 + MER2 DNA MER2_type 1 344 0 2084 95 0 14 chr17 15501687 15502008 -69936472 + AluSx SINE Alu 1 312 0 3628 55 0 0 chr17 15503122 15503559 -69934921 + L1PA5 LINE L1 5710 6146 -8 28 0 0 0 chr17 15503708 15503736 -69934744 + AT_rich Low_complexity Low_complexity 1 28 0 2214 130 22 33 chr17 15503882 15504250 -69934230 + THE1B LTR MaLR 1 364 0 408 244 32 41 chr17 15504417 15504540 -69933940 + MER5C DNA MER1_type 1 122 -202 294 224 15 0 chr17 15504616 15504683 -69933797 + MER5C DNA MER1_type 256 323 -1 840 240 81 51 chr17 15505037 15505525 -69932955 - MLT1H LTR MaLR 0 549 15 200 244 0 0 chr17 15505564 15505605 -69932875 + L2 LINE L2 3269 3309 -4 1906 211 55 45 chr17 15506395 15506926 -69931554 - LTR55 LTR ERV -10 538 3 254 290 21 11 chr17 15507360 15507453 -69931027 - MER103 DNA DNA 0 166 73 205 225 12 12 chr17 15507646 15507726 -69930754 + GA-rich Low_complexity Low_complexity 3 82 0 322 285 87 14 chr17 15508460 15508639 -69929841 + MIR SINE MIR 12 249 -13 491 278 24 47 chr17 15508662 15508917 -69929563 - L1ME4a LINE L1 -256 5865 5617 526 190 18 18 chr17 15510044 15510207 -69928273 + CT-rich Low_complexity Low_complexity 1 163 0 341 321 23 38 chr17 15510508 15510639 -69927841 + MIR SINE MIR 16 144 -64 916 252 28 24 chr17 15511111 15511361 -69927119 + MIR SINE MIR 11 261 -1 354 123 0 0 chr17 15512218 15512275 -69926205 + (CA)n Simple_repeat Simple_repeat 1 57 0 264 285 42 56 chr17 15512405 15512549 -69925931 + MER5B DNA MER1_type 11 152 -26 319 148 33 16 chr17 15514423 15514484 -69923996 + L1ME3A LINE L1 6104 6165 -5 192 215 76 63 chr17 15514519 15514598 -69923882 + MIR SINE MIR 178 257 -5 398 81 32 0 chr17 15514745 15514807 -69923673 + (TCTA)n Simple_repeat Simple_repeat 3 66 0 611 295 84 9 chr17 15514906 15515133 -69923347 - MIR SINE MIR -17 245 2 196 171 57 0 chr17 15515163 15515198 -69923282 + L2 LINE L2 3218 3254 -18 210 143 0 0 chr17 15515411 15515446 -69923034 + (TG)n Simple_repeat Simple_repeat 1 35 0 211 211 19 0 chr17 15516323 15516375 -69922105 + CT-rich Low_complexity Low_complexity 1 53 0 2014 81 39 36 chr17 15519047 15519356 -69919124 - AluSg SINE Alu 0 310 1 204 214 24 0 chr17 15519750 15519792 -69918688 + CT-rich Low_complexity Low_complexity 4 46 0 1781 84 8 0 chr17 15522412 15522650 -69915830 - AluSq SINE Alu -68 245 6 842 293 20 33 chr17 15523357 15523661 -69914819 - MLT1J LTR MaLR -7 504 205 698 347 113 21 chr17 15523997 15524054 -69914426 + L2 LINE L2 2151 2201 -1113 2204 80 0 3 chr17 15524054 15524340 -69914140 - AluSp SINE Alu -28 285 1 698 347 113 21 chr17 15524340 15524934 -69913546 + L2 LINE L2 2201 2862 -452 525 304 293 0 chr17 15525011 15525370 -69913110 - L2 LINE L2 -2 3311 2848 333 269 92 15 chr17 15525566 15525696 -69912784 + L1ME4a LINE L1 5981 6120 -1 375 23 0 0 chr17 15526581 15526625 -69911855 + (CAG)n Simple_repeat Simple_repeat 1 44 0 341 272 139 51 chr17 15527381 15527539 -69910941 - L3 LINE CR1 -24 1553 1382 998 266 95 105 chr17 15527542 15528774 -69909706 - L2 LINE L2 0 3313 2035 2393 48 0 10 chr17 15528798 15529093 -69909387 + AluY SINE Alu 1 292 -19 180 0 0 0 chr17 15530157 15530177 -69908303 + (CAAAAA)n Simple_repeat Simple_repeat 2 21 0 2373 60 7 0 chr17 15531627 15531928 -69906552 - AluY SINE Alu -8 303 1 2250 94 3 0 chr17 15531928 15532226 -69906254 - AluSc SINE Alu -10 299 1 803 210 39 100 chr17 15532595 15532824 -69905656 + MER58A DNA MER1_type 1 215 -9 2271 41 6 47 chr17 15532970 15533290 -69905190 - AluY SINE Alu -4 307 1 279 197 54 35 chr17 15534339 15534455 -69904025 - L1MC/D LINE L1 -287 5834 5768 270 186 17 0 chr17 15534577 15534636 -69903844 + MADE1 DNA Mariner 21 80 0 26 0 0 0 chr17 15534670 15534696 -69903784 + AT_rich Low_complexity Low_complexity 1 26 0 314 274 27 45 chr17 15534740 15534936 -69903544 - L1MC/D LINE L1 -668 5494 5293 369 344 119 9 chr17 15534943 15535170 -69903310 - L1MC/D LINE L1 -1154 4992 4741 255 191 17 69 chr17 15535202 15535375 -69903105 + (TTATA)n Simple_repeat Simple_repeat 1 164 0 305 302 0 0 chr17 15535619 15535725 -69902755 - L1MC/D LINE L1 -1537 4609 4504 253 291 114 34 chr17 15535777 15536489 -69901991 - L1MC/D LINE L1 -2935 3211 2443 341 309 92 28 chr17 15536596 15536740 -69901740 - L1MC/D LINE L1 -3784 2362 2198 1771 125 7 7 chr17 15536740 15537012 -69901468 - AluSx SINE Alu -6 306 35 341 309 92 28 chr17 15537012 15537084 -69901396 - L1MC/D LINE L1 -3948 2198 2132 242 337 0 35 chr17 15537135 15537221 -69901259 + L2 LINE L2 3226 3308 -5 278 237 17 0 chr17 15537949 15538008 -69900472 + L3 LINE CR1 1504 1563 -14 189 0 0 0 chr17 15538589 15538610 -69899870 + (A)n Simple_repeat Simple_repeat 1 21 0 315 255 0 71 chr17 15539034 15539132 -69899348 - L1MC4 LINE L1 -1339 6703 6613 198 191 0 0 chr17 15539150 15539197 -69899283 + (TA)n Simple_repeat Simple_repeat 1 47 0 443 172 35 0 chr17 15541142 15541229 -69897251 + U13 snRNA snRNA 13 102 -2 234 251 43 12 chr17 15541247 15541342 -69897138 - MIR3 SINE MIR -46 162 61 459 240 129 88 chr17 15542888 15542956 -69895524 - MER5B DNA MER1_type 0 178 114 2214 101 6 28 chr17 15542956 15543273 -69895207 + AluSx SINE Alu 1 310 -2 459 240 129 88 chr17 15543273 15543375 -69895105 - MER5B DNA MER1_type -64 114 1 212 245 21 75 chr17 15543618 15543712 -69894768 + L2 LINE L2 3225 3313 0 1669 174 3 29 chr17 15543896 15544206 -69894274 + AluJo SINE Alu 1 302 -10 394 330 112 28 chr17 15544759 15545080 -69893400 + L2 LINE L2 2415 2762 -552 229 316 42 42 chr17 15545301 15545396 -69893084 + L2 LINE L2 3169 3263 -9 184 29 29 29 chr17 15548415 15548449 -69890031 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 203 262 0 0 chr17 15549481 15549523 -69888957 - MIR3 SINE MIR -24 184 143 454 288 78 33 chr17 15549973 15550216 -69888264 + MIR SINE MIR 5 258 -4 180 274 55 27 chr17 15550357 15550430 -69888050 + MER5B DNA MER1_type 104 178 0 439 243 135 0 chr17 15550438 15550599 -69887881 - MER5A DNA MER1_type 0 189 4 569 275 46 85 chr17 15551120 15551509 -69886971 - L1MC4a LINE L1 -1883 5925 5552 6504 212 35 51 chr17 15551702 15554450 -69884030 + L1MB7 LINE L1 3292 6101 -83 8748 99 14 5 chr17 15554454 15555655 -69882825 + L1P3 LINE L1 5 1216 -5245 7306 52 17 16 chr17 15555655 15557286 -69881194 + L1PA7 LINE L1 4521 6154 0 541 133 0 0 chr17 15557287 15557377 -69881103 + L1MB8 LINE L1 6089 6178 0 2676 45 0 3 chr17 15557458 15557767 -69880713 + AluY SINE Alu 1 308 -3 21 0 0 0 chr17 15557797 15557818 -69880662 + AT_rich Low_complexity Low_complexity 1 21 0 2167 113 0 13 chr17 15558836 15559137 -69879343 - AluSx SINE Alu -15 297 1 576 326 97 59 chr17 15559453 15559680 -69878800 - L1M4 LINE L1 -2213 3933 3716 2432 65 0 10 chr17 15559680 15559989 -69878491 - AluY SINE Alu -5 306 1 576 326 97 59 chr17 15559989 15560579 -69877901 - L1M4 LINE L1 -2430 3716 3085 305 278 52 63 chr17 15560576 15560828 -69877652 - L1M4 LINE L1 -3623 2523 2275 * 2135 105 3 3 chr17 15560828 15561122 -69877358 - AluSc SINE Alu -11 298 5 1626 206 0 31 chr17 15561381 15561702 -69876778 + AluJo SINE Alu 1 311 -1 1990 143 36 15 chr17 15561739 15562074 -69876406 - MER39 LTR ERV1 -5 702 361 497 246 103 10 chr17 15562042 15562212 -69876268 - MER39 LTR ERV1 -355 187 1 * 271 318 112 16 chr17 15562374 15562616 -69875864 - HAL1 LINE L1 -789 1718 1454 828 153 0 0 chr17 15562692 15562810 -69875670 + FLAM_C SINE Alu 1 118 -15 761 265 38 74 chr17 15563046 15563099 -69875381 + L1ME4a LINE L1 5546 5599 -522 2279 81 11 0 chr17 15563099 15563382 -69875098 + AluSx SINE Alu 12 297 -15 761 265 38 74 chr17 15563382 15563720 -69874760 + L1ME4a LINE L1 5599 5923 -198 414 0 0 0 chr17 15564093 15564139 -69874341 + (TG)n Simple_repeat Simple_repeat 2 47 0 507 33 0 0 chr17 15564437 15564498 -69873982 + (TC)n Simple_repeat Simple_repeat 2 62 0 2344 94 7 0 chr17 15565879 15566178 -69872302 + AluSg SINE Alu 3 303 -7 239 202 326 0 chr17 15566303 15566392 -69872088 + MIR SINE MIR 145 262 0 2477 74 3 0 chr17 15566703 15567012 -69871468 + AluSp SINE Alu 1 310 -3 299 109 47 62 chr17 15567461 15567525 -69870955 + LTR29 LTR ERV1 137 199 -423 * 1516 231 114 33 chr17 15567511 15568030 -69870450 + LTR48B LTR ERV1 84 644 0 22 35 0 0 chr17 15568030 15568059 -69870421 + AT_rich Low_complexity Low_complexity 1 29 0 569 200 44 37 chr17 15569938 15570073 -69868407 + MER3 DNA MER1_type 35 123 -86 2175 198 69 27 chr17 15570137 15571090 -69867390 - L1ME1 LINE L1 -324 5842 4842 757 41 31 0 chr17 15571092 15571189 -69867291 - L1P4 LINE L1 -677 5484 5385 1900 250 26 30 chr17 15571194 15571459 -69867021 - L1ME1 LINE L1 -1312 4834 4570 2391 78 0 0 chr17 15571459 15571752 -69866728 + AluY SINE Alu 1 293 -18 1900 250 26 30 chr17 15571752 15572062 -69866418 - L1ME1 LINE L1 -1576 4570 4261 7162 114 8 1 chr17 15572063 15575123 -69863357 - L1PA10 LINE L1 0 6483 3340 6790 51 1 0 chr17 15575298 15576081 -69862399 + L1PA6 LINE L1 5371 6154 0 11085 207 22 39 chr17 15577417 15580819 -69857661 - L1PA10 LINE L1 -3103 3358 10 1968 242 17 13 chr17 15580834 15581363 -69857117 - L1ME1 LINE L1 -1880 4266 3736 260 244 13 51 chr17 15581371 15581449 -69857031 - MLT2C1 LTR ERVL -54 343 269 664 146 15 44 chr17 15581580 15581717 -69856763 - MLT1E3 LTR MaLR -420 204 72 323 121 24 24 chr17 15581858 15581941 -69856539 + GA-rich Low_complexity Low_complexity 1 83 0 2444 148 43 45 chr17 15581992 15582438 -69856042 - MER65A LTR ERV1 0 445 1 189 246 29 58 chr17 15582538 15582607 -69855873 + MIR3 SINE MIR 131 197 -11 891 305 95 49 chr17 15582758 15583012 -69855468 + L2 LINE L2 2779 3020 -293 2142 135 0 0 chr17 15583012 15583309 -69855171 - AluSq SINE Alu -16 297 1 891 305 95 49 chr17 15583309 15583563 -69854917 + L2 LINE L2 3020 3312 -1 228 67 0 0 chr17 15584949 15584979 -69853501 + (CA)n Simple_repeat Simple_repeat 2 31 0 189 225 0 0 chr17 15585009 15585049 -69853431 - L2 LINE L2 0 3313 3274 2680 215 28 12 chr17 15585708 15585782 -69852698 + L1M4 LINE L1 2562 2633 -3513 2034 115 31 0 chr17 15585782 15586069 -69852411 + AluSx SINE Alu 2 297 -15 2680 215 28 12 chr17 15586069 15586681 -69851799 + L1M4 LINE L1 2633 3259 -2887 376 216 0 78 chr17 15587038 15587140 -69851340 + MIR SINE MIR 154 247 -15 247 152 152 30 chr17 15587346 15587412 -69851068 - MER57A LTR ERV1 0 403 330 1542 129 57 6 chr17 15587439 15587749 -69850731 - LTR54 LTR ERV1 -134 376 1 310 305 23 0 chr17 15588246 15588349 -69850131 - MIR SINE MIR -48 160 55 241 293 101 10 chr17 15588596 15588695 -69849785 + MIR SINE MIR 5 112 -150 501 280 45 25 chr17 15588712 15588869 -69849611 - MIR SINE MIR -66 196 37 201 74 0 0 chr17 15588986 15589013 -69849467 + (CA)n Simple_repeat Simple_repeat 1 27 0 1856 179 23 20 chr17 15589014 15589361 -69849119 - MLT2C1 LTR ERVL -49 348 1 337 343 9 0 chr17 15589375 15589480 -69849000 + L2 LINE L2 3197 3302 -11 21 0 0 0 chr17 15590408 15590429 -69848051 + AT_rich Low_complexity Low_complexity 1 21 0 414 0 0 0 chr17 15590569 15590615 -69847865 + (CA)n Simple_repeat Simple_repeat 2 47 0 254 297 0 0 chr17 15590615 15590679 -69847801 + L2 LINE L2 2862 2925 -347 2572 47 7 0 chr17 15590766 15591065 -69847415 + AluY SINE Alu 1 301 -10 2332 86 13 0 chr17 15591071 15591374 -69847106 + AluSx SINE Alu 1 307 -5 2064 106 20 3 chr17 15591374 15591666 -69846814 + AluSx SINE Alu 1 297 -15 1118 125 6 0 chr17 15591758 15591918 -69846562 - AluSx SINE Alu -151 161 1 383 338 18 5 chr17 15592035 15592257 -69846223 - L1M4 LINE L1 -1098 5048 4824 268 290 117 6 chr17 15592372 15592534 -69845946 - L1M4 LINE L1 -1005 5141 4962 580 295 41 37 chr17 15592636 15592931 -69845549 + MLT1I LTR MaLR 91 386 -23 290 316 11 0 chr17 15592986 15593160 -69845320 - L1M4 LINE L1 -1231 4915 4740 2121 101 3 3 chr17 15593160 15593456 -69845024 - AluY SINE Alu -15 296 1 538 280 66 18 chr17 15593466 15594002 -69844478 - L1M4 LINE L1 -1497 4649 4027 712 329 63 4 chr17 15594026 15594281 -69844199 + L1MEc LINE L1 36 305 -6091 947 316 82 14 chr17 15594288 15594702 -69843778 + L3 LINE CR1 1130 1571 -6 2147 83 28 0 chr17 15594760 15595050 -69843430 - AluY SINE Alu -13 298 1 243 0 0 0 chr17 15595170 15595197 -69843283 + (TG)n Simple_repeat Simple_repeat 2 28 0 864 189 6 6 chr17 15595200 15595369 -69843111 - AluJo SINE Alu -23 289 121 1630 156 84 39 chr17 15595495 15595854 -69842626 - THE1C LTR MaLR 0 375 1 365 217 33 158 chr17 15595904 15596088 -69842392 - MER117 DNA MER1_type -34 163 3 2118 110 0 13 chr17 15596486 15596794 -69841686 - AluSc SINE Alu -5 304 1 337 392 38 0 chr17 15596827 15597036 -69841444 + MIR SINE MIR 5 221 -41 773 298 57 20 chr17 15597045 15597290 -69841190 - MIR SINE MIR 0 262 9 217 254 0 36 chr17 15597337 15597392 -69841088 - L2 LINE L2 -19 3253 3201 2254 145 13 16 chr17 15597947 15598333 -69840147 + MLT1B LTR MaLR 3 387 -3 2331 137 65 2 chr17 15598478 15598881 -69839599 - MSTA LTR MaLR 0 428 1 298 277 104 73 chr17 15599286 15599575 -69838905 - LTR16A1 LTR ERVL 0 457 160 247 111 0 0 chr17 15600412 15600448 -69838032 + MLT1B LTR MaLR 333 368 -22 328 318 3 23 chr17 15601645 15601763 -69836717 - MIR3 SINE MIR -20 188 71 806 201 19 6 chr17 15602541 15602700 -69835780 + MER5A DNA MER1_type 1 161 -28 2217 100 10 0 chr17 15603602 15603902 -69834578 - AluSg SINE Alu -7 303 1 1534 120 31 0 chr17 15604142 15604401 -69834079 - L1P4 LINE L1 -619 5547 5281 410 326 73 54 chr17 15604513 15604591 -69833889 - L2 LINE L2 -15 3257 3182 490 229 69 51 chr17 15604591 15604766 -69833714 + MER104 DNA MER2_type 1 178 -2 410 326 73 54 chr17 15604766 15604948 -69833532 - L2 LINE L2 -90 3182 2992 844 191 0 0 chr17 15604962 15605098 -69833382 - FRAM SINE Alu -40 136 1 248 226 96 9 chr17 15605598 15605713 -69832767 - Charlie7 DNA MER1_type -48 2564 2440 515 262 47 0 chr17 15606645 15606794 -69831686 - MIR SINE MIR -2 260 105 2458 46 0 3 chr17 15606820 15607122 -69831358 - AluY SINE Alu -10 301 1 1595 89 9 0 chr17 15607826 15608040 -69830440 - LTR12 LTR ERV1 -19 695 480 317 245 31 20 chr17 15608041 15608139 -69830341 - LTR30 LTR ERV1 -80 642 544 4526 155 72 32 chr17 15608145 15609166 -69829314 - pTR5 LTR ERV1 -419 2019 741 358 294 28 9 chr17 15609198 15609307 -69829173 - MIR SINE MIR -150 112 2 1333 168 111 8 chr17 15609848 15610110 -69828370 + AluJb SINE Alu 5 293 -19 1570 143 17 34 chr17 15611265 15611559 -69826921 - AluJo SINE Alu -23 289 1 599 87 47 8 chr17 15611847 15611974 -69826506 + GA-rich Low_complexity Low_complexity 1 132 0 210 240 20 0 chr17 15613133 15613183 -69825297 + L3 LINE CR1 900 950 -627 2142 98 7 3 chr17 15613389 15613686 -69824794 + AluSg SINE Alu 1 298 -12 275 242 106 83 chr17 15613943 15614075 -69824405 + MIR SINE MIR 9 143 -119 2160 106 7 10 chr17 15614288 15614591 -69823889 + AluSg SINE Alu 1 302 -8 214 286 200 0 chr17 15614984 15615089 -69823391 - MIR SINE MIR -122 140 15 825 246 56 20 chr17 15615812 15616064 -69822416 + MIR SINE MIR 2 262 0 1078 267 101 33 chr17 15616240 15616637 -69821843 + MLT1J2 LTR MaLR 1 424 -26 24 0 0 0 chr17 15616663 15616687 -69821793 + AT_rich Low_complexity Low_complexity 1 24 0 234 192 0 0 chr17 15616738 15616790 -69821690 + (TA)n Simple_repeat Simple_repeat 1 52 0 261 75 0 0 chr17 15617051 15617091 -69821389 + (T)n Simple_repeat Simple_repeat 1 40 0 414 355 53 12 chr17 15617122 15617291 -69821189 + MIR3 SINE MIR 32 207 -1 1713 191 97 0 chr17 15618633 15618973 -69819507 - MER93b LTR ERV1 0 373 1 985 192 27 49 chr17 15619700 15619924 -69818556 - MER20 DNA MER1_type 0 219 1 2203 60 46 0 chr17 15620298 15620582 -69817898 - AluY SINE Alu 0 311 15 380 226 129 0 chr17 15620705 15620798 -69817682 - MLT1A1 LTR MaLR 0 374 270 506 169 17 59 chr17 15621233 15621351 -69817129 - MLT1A1 LTR MaLR -188 177 65 459 52 0 0 chr17 15622384 15622442 -69816038 + (ATG)n Simple_repeat Simple_repeat 1 58 0 301 281 24 0 chr17 15622512 15622594 -69815886 - MIR SINE MIR -107 155 72 1402 167 112 65 chr17 15622720 15623103 -69815377 + MER57A LTR ERV1 1 401 -2 204 349 104 9 chr17 15623467 15623573 -69814907 - MIR SINE MIR -62 146 31 2337 82 0 0 chr17 15624552 15624857 -69813623 + AluSc SINE Alu 1 305 -4 264 370 110 32 chr17 15624926 15625080 -69813400 - MIR3 SINE MIR -21 187 22 673 190 0 8 chr17 15625263 15625384 -69813096 + FLAM_C SINE Alu 2 121 -22 1497 108 0 13 chr17 15625433 15625665 -69812815 + AluY SINE Alu 83 311 0 332 244 8 107 chr17 15626646 15626777 -69811703 - L1ME4a LINE L1 -1 6120 6003 854 306 66 39 chr17 15626790 15627346 -69811134 - L2 LINE L2 -13 3300 2734 3037 129 179 78 chr17 15627356 15627731 -69810749 + MER44D DNA MER2_type 1 346 -2141 2077 102 3 3 chr17 15627731 15628024 -69810456 + AluSc SINE Alu 17 309 0 3037 129 179 78 chr17 15628024 15628313 -69810167 + MER44D DNA MER2_type 346 604 -1 1382 226 129 0 chr17 15628313 15628662 -69809818 - L1MB7 LINE L1 -17 6167 5774 575 226 102 0 chr17 15628666 15628843 -69809637 - L2 LINE L2 -563 2751 2557 404 227 93 0 chr17 15628840 15628937 -69809543 + L2 LINE L2 2113 2218 -1096 * 893 107 0 0 chr17 15628991 15629112 -69809368 + AluSq/x SINE Alu 5 125 -188 374 159 77 104 chr17 15629194 15629542 -69808938 - MER34 LTR ERV1 -24 739 323 * 562 247 51 9 chr17 15629541 15629761 -69808719 - LTR48 LTR ERV1 -411 131 1 1875 276 114 22 chr17 15629762 15630661 -69807819 + L2 LINE L2 2331 3313 0 379 260 31 97 chr17 15630892 15631088 -69807392 + MLT1K LTR MaLR 257 439 -149 2124 181 61 11 chr17 15631121 15631563 -69806917 - MLT1C LTR MaLR 0 467 4 324 236 0 56 chr17 15631760 15631849 -69806631 - L1MC4 LINE L1 -1339 6703 6620 320 350 10 0 chr17 15632217 15632317 -69806163 - L2 LINE L2 -27 3286 3186 231 224 17 17 chr17 15633250 15633308 -69805172 + MIR SINE MIR 119 176 -86 527 266 32 83 chr17 15633559 15633619 -69804861 + MIR SINE MIR 50 111 -151 2006 96 7 0 chr17 15633619 15633940 -69804540 - AluSx SINE Alu 0 323 1 527 266 32 83 chr17 15633940 15634096 -69804384 + MIR SINE MIR 111 256 -6 257 311 29 19 chr17 15634570 15634673 -69803807 - MIR SINE MIR -96 166 63 1536 199 32 67 chr17 15635922 15636036 -69802444 - LTR52 LTR ERVL -3 418 302 1559 91 30 35 chr17 15636036 15636267 -69802213 - MER30 DNA MER1_type 0 230 1 1536 199 32 67 chr17 15636267 15636373 -69802107 - LTR52 LTR ERVL -119 302 194 1015 106 0 0 chr17 15636373 15636505 -69801975 - FLAM_C SINE Alu -1 132 1 1536 199 32 67 chr17 15636505 15636516 -69801964 - LTR52 LTR ERVL -227 194 184 2721 13 0 0 chr17 15636516 15636822 -69801658 - AluYb8 SINE Alu -12 306 1 1536 199 32 67 chr17 15636822 15636981 -69801499 - LTR52 LTR ERVL -237 184 40 1391 203 34 14 chr17 15636981 15637108 -69801372 + AluJo SINE Alu 1 124 -188 245 29 29 0 chr17 15637108 15637142 -69801338 + (TAAA)n Simple_repeat Simple_repeat 3 37 0 1391 203 34 14 chr17 15637142 15637309 -69801171 + AluJo SINE Alu 124 301 -11 1536 199 32 67 chr17 15637309 15637348 -69801132 - LTR52 LTR ERVL -381 40 1 4168 159 55 37 chr17 15637429 15638236 -69800244 - L1MA7 LINE L1 -157 6134 5314 719 145 26 13 chr17 15638236 15638380 -69800100 + L1MA7 LINE L1 6136 6289 -2 217 367 10 10 chr17 15638449 15638547 -69799933 + MER5B DNA MER1_type 51 148 -30 2194 69 0 21 chr17 15639452 15639803 -69798677 - AluY SINE Alu 0 345 1 1505 161 37 22 chr17 15639899 15640223 -69798257 - L1MB8 LINE L1 0 6178 5850 1077 225 7 44 chr17 15640434 15640705 -69797775 + MIR SINE MIR 2 262 0 2095 103 13 0 chr17 15641110 15641410 -69797070 - AluY SINE Alu -7 304 1 4195 185 72 15 chr17 15641538 15642354 -69796126 - MER21B LTR ERV1 0 863 1 409 244 36 54 chr17 15642530 15642698 -69795782 - L1MC5 LINE L1 -26 7935 7771 469 229 103 16 chr17 15642711 15642902 -69795578 - L1MC4a LINE L1 -379 5799 5693 2130 96 3 0 chr17 15642924 15643217 -69795263 - AluY SINE Alu -17 294 1 248 387 57 8 chr17 15643374 15643498 -69794982 - L2 LINE L2 -2 3270 3141 301 206 63 0 chr17 15643539 15643602 -69794878 - MLT1J LTR MaLR 0 511 445 1110 242 130 54 chr17 15643607 15644145 -69794335 + L1MC5 LINE L1 6959 7537 -424 514 254 26 69 chr17 15644716 15644905 -69793575 + MIR SINE MIR 48 228 -34 693 171 34 0 chr17 15646696 15646813 -69791667 + MER5A DNA MER1_type 48 168 -21 317 288 53 30 chr17 15646698 15646830 -69791650 - MER5A DNA MER1_type -39 150 16 * 248 137 20 0 chr17 15646923 15646974 -69791506 + (TG)n Simple_repeat Simple_repeat 2 53 0 339 232 60 108 chr17 15647500 15647685 -69790795 - MER5B DNA MER1_type -1 177 2 1366 122 18 140 chr17 15647948 15648277 -69790203 + AluJo SINE Alu 17 305 -7 283 213 98 0 chr17 15648588 15648649 -69789831 + MIR SINE MIR 16 82 -180 213 213 0 0 chr17 15648725 15648772 -69789708 + C-rich Low_complexity Low_complexity 2 48 0 305 209 25 0 chr17 15649103 15649266 -69789214 + (TG)n Simple_repeat Simple_repeat 2 168 0 596 152 25 8 chr17 15649337 15649868 -69788612 + (TG)n Simple_repeat Simple_repeat 1 540 0 392 273 66 8 chr17 15650627 15650748 -69787732 - MIR SINE MIR -132 130 3 827 207 30 114 chr17 15651862 15652229 -69786251 - L1ME3A LINE L1 -50 6120 5785 2417 59 3 0 chr17 15652349 15652653 -69785827 - AluY SINE Alu -6 305 1 755 224 24 30 chr17 15653122 15653287 -69785193 + MER5A DNA MER1_type 3 166 -23 249 234 31 16 chr17 15653363 15653427 -69785053 + L2 LINE L2 3017 3081 -191 187 253 80 27 chr17 15653470 15653545 -69784935 + L2 LINE L2 3159 3237 -35 * 655 289 76 32 chr17 15653544 15654186 -69784294 - L2 LINE L2 -51 3262 2589 514 289 34 7 chr17 15654212 15654361 -69784119 + MIR SINE MIR 56 208 -54 526 282 163 37 chr17 15654457 15654911 -69783569 - L2 LINE L2 -783 2531 2021 2460 64 0 6 chr17 15655055 15655368 -69783112 + AluY SINE Alu 1 311 0 743 224 21 36 chr17 15655817 15656009 -69782471 - MER5A DNA MER1_type 0 189 1 197 188 42 21 chr17 15657681 15657729 -69780751 - MIR SINE MIR -115 147 99 306 0 0 0 chr17 15658203 15658237 -69780243 + (TG)n Simple_repeat Simple_repeat 2 35 0 2130 257 40 29 chr17 15658800 15659379 -69779101 - MLT1E LTR MaLR -2 591 7 407 301 72 25 chr17 15659895 15660079 -69778401 - MIR SINE MIR -56 206 8 213 333 0 0 chr17 15660283 15660346 -69778134 + (TG)n Simple_repeat Simple_repeat 1 63 0 382 285 68 68 chr17 15660836 15661057 -69777423 - MIR SINE MIR -19 243 23 312 91 0 0 chr17 15661906 15661950 -69776530 + (GA)n Simple_repeat Simple_repeat 1 44 0 441 202 42 99 chr17 15662478 15662640 -69775840 - MIR SINE MIR -63 145 34 1347 297 137 30 chr17 15662863 15663412 -69775068 - L2 LINE L2 -61 3252 2763 2799 85 6 3 chr17 15663412 15663775 -69774705 - THE1B LTR MaLR 0 364 1 1347 297 137 30 chr17 15663775 15664614 -69773866 - L2 LINE L2 -550 2763 1707 3248 176 15 3 chr17 15664625 15665233 -69773247 + L1PB4 LINE L1 5538 6152 -4 813 256 20 32 chr17 15665361 15665607 -69772873 + MIR SINE MIR 20 262 0 308 350 17 17 chr17 15665611 15665731 -69772749 - L2 LINE L2 -2100 1214 1095 583 335 70 17 chr17 15665740 15666143 -69772337 - L2 LINE L2 -2447 867 444 199 236 36 36 chr17 15667513 15667568 -69770912 + L2 LINE L2 3136 3190 -82 365 274 82 20 chr17 15669296 15669442 -69769038 - MER103 DNA DNA -2 164 10 288 0 0 0 chr17 15670054 15670086 -69768394 + (TC)n Simple_repeat Simple_repeat 2 33 0 1011 113 7 0 chr17 15670087 15670228 -69768252 - AluSq/x SINE Alu -168 144 3 22 0 0 0 chr17 15670250 15670272 -69768208 + AT_rich Low_complexity Low_complexity 1 22 0 574 267 41 6 chr17 15670303 15670475 -69768005 + MER5B DNA MER1_type 1 178 0 1757 156 16 25 chr17 15671218 15671533 -69766947 + AluJo SINE Alu 1 312 0 211 281 35 0 chr17 15671573 15671630 -69766850 - MIR SINE MIR -116 146 88 2200 116 3 0 chr17 15672361 15672672 -69765808 - AluSx SINE Alu 0 312 1 225 265 265 15 chr17 15672672 15672804 -69765676 + L3 LINE CR1 1374 1538 -39 827 259 5 5 chr17 15673342 15673531 -69764949 + MER5A DNA MER1_type 1 189 0 368 180 0 0 chr17 15673542 15673603 -69764877 + MER5A DNA MER1_type 4 64 -125 526 146 67 0 chr17 15673867 15673956 -69764524 + MER5A DNA MER1_type 94 188 -1 3740 32 2 2 chr17 15674704 15675144 -69763336 - L1PA5 LINE L1 -8 6146 5707 313 234 315 0 chr17 15675877 15675988 -69762492 + MIR SINE MIR 46 191 -71 629 292 50 5 chr17 15676018 15676237 -69762243 - MIR SINE MIR -33 229 1 197 303 219 0 chr17 15676237 15676349 -69762131 - MIR SINE MIR -47 215 78 1641 209 171 48 chr17 15677306 15677995 -69760485 - LTR50 LTR ERVL -7 788 15 2043 122 3 3 chr17 15679026 15679330 -69759150 - AluSx SINE Alu -7 305 2 2144 90 10 16 chr17 15680586 15680896 -69757584 + AluSq SINE Alu 1 308 -5 189 0 0 0 chr17 15681106 15681127 -69757353 + (T)n Simple_repeat Simple_repeat 1 21 0 288 327 45 0 chr17 15682729 15682839 -69755641 + L2 LINE L2 3197 3311 -2 275 167 26 64 chr17 15684119 15684197 -69754283 + CT-rich Low_complexity Low_complexity 3 77 0 23 54 0 0 chr17 15684217 15684254 -69754226 + AT_rich Low_complexity Low_complexity 1 37 0 662 202 6 0 chr17 15685232 15685410 -69753070 + (CCA)n Simple_repeat Simple_repeat 2 180 0 261 185 0 0 chr17 15685397 15685462 -69753018 + (CACCAT)n Simple_repeat Simple_repeat 4 68 0 * 2186 81 0 66 chr17 15685497 15685831 -69752649 + AluSx SINE Alu 1 312 0 1328 207 90 16 chr17 15686142 15686509 -69751971 + Charlie4a DNA MER1_type 21 414 -94 349 237 113 73 chr17 15686628 15686928 -69751552 - L1ME4a LINE L1 -104 6017 5697 261 248 40 120 chr17 15687259 15687384 -69751096 - MER91C DNA MER1_type 0 140 26 245 319 59 7 chr17 15687439 15687574 -69750906 - L1MC4a LINE L1 -1879 5929 5788 1870 155 3 3 chr17 15687670 15687960 -69750520 - MLT1A1 LTR MaLR -75 290 1 400 319 9 9 chr17 15688468 15688584 -69749896 - MER91B DNA MER1_type -74 116 1 195 374 30 30 chr17 15688584 15688643 -69749837 - L2 LINE L2 -233 3039 2978 321 47 0 0 chr17 15688643 15688686 -69749794 + (TG)n Simple_repeat Simple_repeat 2 44 0 195 374 30 30 chr17 15688686 15688744 -69749736 - L2 LINE L2 -293 2979 2922 2445 56 3 0 chr17 15688751 15689054 -69749426 - AluY SINE Alu -7 304 1 1294 222 52 48 chr17 15689058 15689576 -69748904 + MLT1F1 LTR MaLR 1 593 0 463 323 24 12 chr17 15689642 15689809 -69748671 - MER5A DNA MER1_type -13 176 8 349 331 19 19 chr17 15690128 15690285 -69748195 + MARNA DNA Mariner 40 196 -390 257 108 96 18 chr17 15690418 15690584 -69747896 + (TA)n Simple_repeat Simple_repeat 1 179 0 256 97 97 10 chr17 15690626 15690729 -69747751 + (TA)n Simple_repeat Simple_repeat 1 112 0 260 172 78 26 chr17 15690732 15690848 -69747632 + (CATA)n Simple_repeat Simple_repeat 4 125 0 308 257 30 50 chr17 15690848 15690949 -69747531 - L1MC4 LINE L1 -1339 6703 6605 274 166 89 32 chr17 15690950 15691107 -69747373 + (TA)n Simple_repeat Simple_repeat 2 167 0 414 190 0 0 chr17 15691127 15691206 -69747274 + AluJ/FRAM SINE Alu 219 297 -15 212 208 21 21 chr17 15691430 15691478 -69747002 + L2 LINE L2 3223 3270 -2 193 56 28 28 chr17 15691527 15691563 -69746917 + (TATATG)n Simple_repeat Simple_repeat 1 36 0 21 0 0 0 chr17 15691632 15691653 -69746827 + AT_rich Low_complexity Low_complexity 1 21 0 2013 113 0 7 chr17 15691938 15692289 -69746191 + AluSg SINE Alu 1 310 0 221 205 0 0 chr17 15692603 15692642 -69745838 + MIR SINE MIR 32 70 -138 500 319 24 43 chr17 15692730 15692833 -69745647 - MIR SINE MIR -2 260 162 2473 129 95 5 chr17 15692833 15693276 -69745204 - L1MA9 LINE L1 0 6312 5830 500 319 24 43 chr17 15693276 15693382 -69745098 - MIR SINE MIR -100 162 55 2293 105 3 0 chr17 15694802 15695107 -69743373 + AluSp SINE Alu 1 306 -7 339 65 0 0 chr17 15695140 15695186 -69743294 + (TAAA)n Simple_repeat Simple_repeat 2 47 0 588 290 52 21 chr17 15695290 15695580 -69742900 - L1ME4a LINE L1 -162 5959 5661 853 279 63 95 chr17 15696298 15696628 -69741852 - HAL1 LINE L1 -1156 1351 1047 1834 102 14 53 chr17 15696628 15696769 -69741711 - AluSp SINE Alu -39 274 148 2323 71 16 16 chr17 15696769 15697078 -69741402 - AluSp SINE Alu -4 309 1 1834 102 14 53 chr17 15697078 15697220 -69741260 - AluSp SINE Alu -165 148 2 853 279 63 95 chr17 15697220 15697487 -69740993 - HAL1 LINE L1 -1460 1047 773 244 214 0 0 chr17 15697951 15698007 -69740473 - L1MC4 LINE L1 -60 7982 7927 185 204 41 20 chr17 15698324 15698373 -69740107 - L2 LINE L2 -1 3312 3263 1491 199 87 0 chr17 15698776 15699245 -69739235 + AluJo SINE Alu 1 312 0 267 108 31 31 chr17 15699245 15699299 -69739181 + GA-rich Low_complexity Low_complexity 10 66 0 2975 47 0 0 chr17 15700245 15700608 -69737872 - L1PA5 LINE L1 -2 6152 5790 460 275 74 25 chr17 15701207 15701451 -69737029 - HAL1 LINE L1 -7 2500 2245 2365 89 0 10 chr17 15701651 15701955 -69736525 + AluSg SINE Alu 2 302 -8 364 192 64 16 chr17 15702054 15702179 -69736301 - HAL1 LINE L1 -354 2153 2023 297 322 71 19 chr17 15702317 15702584 -69735896 - HAL1 LINE L1 -703 1804 1524 231 232 0 49 chr17 15702769 15702851 -69735629 - HAL1 LINE L1 -1161 1346 1269 2370 60 0 10 chr17 15702885 15703184 -69735296 + AluY SINE Alu 1 296 -15 235 258 0 16 chr17 15703506 15703568 -69734912 + CT-rich Low_complexity Low_complexity 3 63 0 959 231 20 26 chr17 15703576 15703879 -69734601 - AluY SINE Alu 0 301 1 291 259 9 56 chr17 15704201 15704309 -69734171 + GA-rich Low_complexity Low_complexity 6 108 0 329 261 22 0 chr17 15704310 15704444 -69734036 + G-rich Low_complexity Low_complexity 1 137 0 1781 216 50 29 chr17 15704548 15705093 -69733387 - L1M4 LINE L1 -2170 3976 3421 444 275 7 131 chr17 15705100 15705335 -69733145 + L2 LINE L2 3051 3243 -70 2102 113 0 14 chr17 15705335 15705627 -69732853 - AluSc SINE Alu -21 288 1 444 275 7 131 chr17 15705627 15705689 -69732791 + L2 LINE L2 3243 3311 -2 662 356 50 39 chr17 15705699 15706337 -69732143 - L1M4 LINE L1 -2255 3891 3247 21 71 0 0 chr17 15706531 15706573 -69731907 + AT_rich Low_complexity Low_complexity 1 42 0 2365 103 0 0 chr17 15707957 15708268 -69730212 + AluY SINE Alu 1 311 0 686 273 161 39 chr17 15708982 15709392 -69729088 + MLT1J LTR MaLR 1 460 -51 845 250 70 13 chr17 15709755 15710067 -69728413 + MARNA DNA Mariner 169 498 -88 187 139 0 28 chr17 15711514 15711550 -69726930 - L2 LINE L2 -15 3298 3264 2184 76 23 36 chr17 15711711 15712039 -69726441 - AluSq SINE Alu 0 313 1 213 94 0 0 chr17 15712746 15712778 -69725702 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 459 267 256 5 chr17 15712929 15713120 -69725360 + MIR SINE MIR 2 240 -22 409 338 0 15 chr17 15713154 15713287 -69725193 + MIR SINE MIR 77 207 -55 316 215 99 16 chr17 15713787 15713908 -69724572 + LTR67 LTR ERVL 426 556 -1 290 26 26 0 chr17 15713982 15714021 -69724459 + (TATG)n Simple_repeat Simple_repeat 1 40 0 2235 91 0 10 chr17 15714080 15714378 -69724102 + AluSq SINE Alu 1 295 -18 974 254 48 121 chr17 15714385 15715007 -69723473 - L2 LINE L2 0 3313 2729 2365 77 0 0 chr17 15715135 15715421 -69723059 - AluSc SINE Alu -23 286 1 271 294 176 15 chr17 15716614 15716750 -69721730 + MIR3 SINE MIR 38 195 -13 196 258 75 67 chr17 15716813 15716933 -69721547 - MIR3 SINE MIR -9 199 79 1543 204 120 17 chr17 15717005 15717738 -69720742 + L1ME2 LINE L1 5312 6161 -5 1787 171 58 0 chr17 15719022 15719367 -69719113 + MLT1A1 LTR MaLR 1 365 0 222 338 44 50 chr17 15720006 15720166 -69718314 - L2 LINE L2 -56 3216 3058 2092 127 0 7 chr17 15720952 15721251 -69717229 - AluSg SINE Alu -13 297 1 312 230 58 43 chr17 15721923 15722062 -69716418 + L1ME LINE L1 5664 5804 -317 671 216 9 0 chr17 15722128 15722277 -69716203 + FLAM_A SINE Alu 1 150 0 204 237 17 51 chr17 15722356 15722474 -69716006 + T-rich Low_complexity Low_complexity 2 115 0 310 247 129 87 chr17 15722531 15722588 -69715892 - L1MEc LINE L1 -3987 2409 2356 819 142 8 15 chr17 15722588 15722722 -69715758 - FLAM_C SINE Alu 0 133 1 310 247 129 87 chr17 15722722 15722951 -69715529 - L1MEc LINE L1 -4040 2356 2111 26 64 0 0 chr17 15723405 15723452 -69715028 + AT_rich Low_complexity Low_complexity 1 47 0 467 311 81 28 chr17 15723737 15724171 -69714309 - L1ME3A LINE L1 -286 5867 5411 531 208 0 0 chr17 15724193 15724289 -69714191 - FLAM_A SINE Alu -41 101 6 290 239 76 18 chr17 15724295 15724470 -69714010 - L1ME3A LINE L1 -752 5401 5240 319 263 47 47 chr17 15724493 15724706 -69713774 - L1ME3A LINE L1 -4944 1175 963 394 281 0 89 chr17 15724715 15724861 -69713619 - L2 LINE L2 0 3313 3181 2549 7 0 0 chr17 15724921 15725198 -69713282 - AluYb8 SINE Alu -3 315 39 349 254 102 23 chr17 15725264 15725441 -69713039 - L1ME3A LINE L1 -5257 862 672 187 356 24 89 chr17 15726224 15726808 -69711672 + L2 LINE L2 2191 2736 -578 471 289 112 48 chr17 15726895 15726982 -69711498 + MLT1J2 LTR MaLR 69 149 -301 192 97 0 0 chr17 15726982 15727013 -69711467 + (TG)n Simple_repeat Simple_repeat 2 32 0 471 289 112 48 chr17 15727013 15727282 -69711198 + MLT1J2 LTR MaLR 149 448 -2 264 30 0 0 chr17 15727652 15727685 -69710795 + (TG)n Simple_repeat Simple_repeat 2 34 0 327 277 65 26 chr17 15728731 15728886 -69709594 - MLT1L LTR MaLR -6 609 449 2311 107 0 0 chr17 15729718 15730016 -69708464 + AluSc SINE Alu 1 298 -11 2005 82 3 73 chr17 15730534 15730869 -69707611 - AluY SINE Alu 0 314 1 1167 112 28 0 chr17 15731357 15731536 -69706944 - L1PA13 LINE L1 -7 6156 5973 548 81 69 0 chr17 15731536 15731623 -69706857 + L1P4 LINE L1 5513 5605 -558 614 130 0 0 chr17 15731771 15731871 -69706609 + L1P4 LINE L1 5608 5707 -461 2293 94 7 0 chr17 15732440 15732739 -69705741 + AluSx SINE Alu 2 302 -10 2321 113 3 0 chr17 15732739 15733123 -69705357 + AluSp SINE Alu 1 386 0 2296 148 56 2 chr17 15733137 15733550 -69704930 - LTR47A LTR ERVL -17 435 1 3867 154 64 52 chr17 15733557 15735025 -69703455 - LTR49-int LTR ERV1 -687 6071 4569 9149 159 50 21 chr17 15735040 15736431 -69702049 - LTR49-int LTR ERV1 -1905 4853 3504 3461 147 68 42 chr17 15736431 15737138 -69701342 + LTR8A LTR ERV1 3 727 0 9149 159 50 21 chr17 15737138 15737524 -69700956 - LTR49-int LTR ERV1 -3254 3504 3046 2096 107 3 32 chr17 15737524 15737833 -69700647 - AluSp SINE Alu -13 300 1 9149 159 50 21 chr17 15737833 15737939 -69700541 - LTR49-int LTR ERV1 -3712 3046 2945 941 104 8 0 chr17 15737971 15738105 -69700375 - AluSp/q SINE Alu -4 309 175 1271 159 81 51 chr17 15738105 15738602 -69699878 - LTR49-int LTR ERV1 -2770 3561 1181 463 188 0 0 chr17 15738629 15738726 -69699754 - LTR49-int LTR ERV1 -3220 2726 854 * 940 229 23 36 chr17 15738719 15739027 -69699453 - LTR49-int LTR ERV1 -4060 2271 1984 344 332 35 66 chr17 15739064 15739134 -69699346 - L1 LINE L1 -1635 4511 4440 1995 114 4 4 chr17 15739134 15739454 -69699026 - AluSg SINE Alu 0 320 1 344 332 35 66 chr17 15739454 15739502 -69698978 - L1 LINE L1 -1706 4440 4392 198 0 0 0 chr17 15739502 15739524 -69698956 + (TG)n Simple_repeat Simple_repeat 2 23 0 344 332 35 66 chr17 15739524 15739639 -69698841 - L1 LINE L1 -1754 4392 4284 849 266 145 18 chr17 15739639 15740038 -69698442 - MLT1J2 LTR MaLR 0 450 1 344 332 35 66 chr17 15740038 15740087 -69698393 - L1 LINE L1 -1862 4284 4235 256 327 52 13 chr17 15740228 15740534 -69697946 - L1 LINE L1 -2207 3939 3622 22674 58 3 7 chr17 15740708 15745068 -69693412 - L1PA6 LINE L1 -1 6153 1809 747 119 0 0 chr17 15745079 15745188 -69693292 - L1PA6 LINE L1 -6027 119 11 2465 227 67 47 chr17 15745195 15745890 -69692590 - L1ME1 LINE L1 -63 6103 5358 1962 133 0 20 chr17 15745890 15746051 -69692429 - AluY SINE Alu -15 296 142 279 0 0 0 chr17 15746051 15746082 -69692398 + (TA)n Simple_repeat Simple_repeat 1 31 0 1962 133 0 20 chr17 15746082 15746220 -69692260 - AluY SINE Alu -169 142 3 2465 227 67 47 chr17 15746220 15746623 -69691857 - L1ME1 LINE L1 -808 5358 4965 777 238 34 55 chr17 15746643 15746822 -69691658 - MIR SINE MIR -18 244 70 2507 60 3 0 chr17 15746822 15747124 -69691356 + AluY SINE Alu 1 303 -8 777 238 34 55 chr17 15747124 15747179 -69691301 - MIR SINE MIR -192 70 15 262 259 85 5 chr17 15747227 15747439 -69691041 - L1ME1 LINE L1 -2840 3306 3078 386 305 73 76 chr17 15747670 15747972 -69690508 + L1MC4a LINE L1 6499 6799 -1009 285 349 24 42 chr17 15749422 15749588 -69688892 + L2 LINE L2 2888 3050 -222 1535 148 7 14 chr17 15749668 15749952 -69688528 + Tigger2 DNA MER2_type 1 282 -2436 718 161 8 0 chr17 15749952 15750070 -69688410 + AluSq/x SINE Alu 1 119 -193 2507 162 32 4 chr17 15750098 15750562 -69687918 + Tigger2 DNA MER2_type 268 744 -1974 901 161 17 6 chr17 15750685 15750859 -69687621 - MER50 LTR ERV1 -23 711 536 1285 101 11 0 chr17 15750877 15751056 -69687424 - AluSg/x SINE Alu 0 312 132 2846 153 24 22 chr17 15751057 15751608 -69686872 - MER50 LTR ERV1 -182 552 1 1485 157 4 15 chr17 15751633 15751894 -69686586 + Tigger2 DNA MER2_type 2451 2708 -10 2060 114 0 0 chr17 15752709 15753032 -69685448 + AluSc SINE Alu 1 323 0 1199 175 5 14 chr17 15753245 15753456 -69685024 - AluJo SINE Alu -20 292 84 374 294 145 48 chr17 15754785 15755013 -69683467 + L3 LINE CR1 1302 1551 -26 243 307 133 35 chr17 15755057 15755232 -69683248 + MIR3 SINE MIR 2 191 -58 461 339 27 22 chr17 15755308 15755491 -69682989 - MIR3 SINE MIR -21 187 4 234 289 58 41 chr17 15755548 15755669 -69682811 - L2 LINE L2 -17 3255 3133 236 270 0 27 chr17 15756269 15756343 -69682137 + MIR SINE MIR 90 161 -101 225 65 0 0 chr17 15756718 15756749 -69681731 + (TG)n Simple_repeat Simple_repeat 2 32 0 24 0 0 0 chr17 15756825 15756849 -69681631 + AT_rich Low_complexity Low_complexity 1 24 0 2321 79 3 7 chr17 15756849 15757154 -69681326 - AluY SINE Alu -7 304 1 211 208 21 21 chr17 15757614 15757662 -69680818 - L2 LINE L2 -2 3270 3223 423 177 0 0 chr17 15757886 15757965 -69680515 - AluJ/FRAM SINE Alu -15 297 219 212 174 38 98 chr17 15757977 15758109 -69680371 + (ATATG)n Simple_repeat Simple_repeat 5 128 0 406 144 17 56 chr17 15758109 15758289 -69680191 + (TATG)n Simple_repeat Simple_repeat 3 175 0 439 150 0 62 chr17 15758504 15758531 -69679949 - AluJo SINE Alu -237 75 48 4532 131 35 17 chr17 15758531 15759302 -69679178 - LTR1 LTR ERV1 0 785 1 439 150 0 62 chr17 15759302 15759354 -69679126 - AluJo SINE Alu -264 48 1 444 260 89 76 chr17 15759545 15760007 -69678473 + MLT1K LTR MaLR 5 472 -4 313 283 11 11 chr17 15760199 15760291 -69678189 - MIR SINE MIR -6 256 165 225 211 88 0 chr17 15760294 15760351 -69678129 - MIR SINE MIR -75 187 126 192 225 0 0 chr17 15761442 15761482 -69676998 + L2 LINE L2 3274 3313 0 210 71 0 0 chr17 15761512 15761540 -69676940 + (TG)n Simple_repeat Simple_repeat 2 29 0 936 303 95 49 chr17 15762926 15763180 -69675300 - L2 LINE L2 -1 3312 3071 2138 120 14 0 chr17 15763180 15763472 -69675008 + AluSq SINE Alu 1 296 -17 936 303 95 49 chr17 15763472 15763726 -69674754 - L2 LINE L2 -242 3071 2779 188 246 29 58 chr17 15763877 15763946 -69674534 - MIR3 SINE MIR -11 197 131 2241 148 43 45 chr17 15764046 15764492 -69673988 + MER65A LTR ERV1 1 445 0 323 121 24 24 chr17 15764543 15764626 -69673854 + CT-rich Low_complexity Low_complexity 1 83 0 601 146 15 44 chr17 15764767 15764904 -69673576 + MLT1E3 LTR MaLR 72 204 -420 232 244 13 51 chr17 15765035 15765113 -69673367 + MLT2C1 LTR ERVL 269 343 -54 1734 242 17 13 chr17 15765121 15765650 -69672830 + L1ME1 LINE L1 3736 4266 -1880 10128 207 22 39 chr17 15765665 15769067 -69669413 + L1PA10 LINE L1 10 3358 -3103 6101 51 1 0 chr17 15770403 15771186 -69667294 - L1PA6 LINE L1 0 6154 5371 6537 116 8 2 chr17 15771361 15774412 -69664068 + L1PA10 LINE L1 3340 6479 -4 1671 249 26 29 chr17 15774416 15774733 -69663747 + L1ME1 LINE L1 4254 4570 -1576 2403 75 0 0 chr17 15774733 15775026 -69663454 - AluY SINE Alu -18 293 1 1671 249 26 29 chr17 15775026 15775291 -69663189 + L1ME1 LINE L1 4570 4834 -1312 702 52 31 0 chr17 15775296 15775393 -69663087 + L1PA8A LINE L1 5385 5484 -647 1928 197 70 27 chr17 15775395 15776347 -69662133 + L1ME1 LINE L1 4842 5842 -324 508 208 50 0 chr17 15776426 15776546 -69661934 - MER3 DNA MER1_type -49 160 35 456 149 149 0 chr17 15877626 15877720 -69560760 - MIR SINE MIR -82 180 73 2090 128 0 0 chr17 15877733 15878046 -69560434 - AluSq SINE Alu 0 313 1 456 19 0 0 chr17 15878075 15878128 -69560352 + (TTCC)n Simple_repeat Simple_repeat 3 55 0 1673 184 3 19 chr17 15878128 15878443 -69560037 - AluJo SINE Alu 0 312 3 203 313 62 23 chr17 15878749 15878877 -69559603 - MIR SINE MIR -44 218 86 2283 82 0 0 chr17 15879013 15879304 -69559176 + AluSg SINE Alu 1 291 -19 408 250 80 9 chr17 15879308 15879420 -69559060 + MIR SINE MIR 72 191 -71 1970 111 0 14 chr17 15879420 15879739 -69558741 + AluSx SINE Alu 1 315 0 681 120 19 9 chr17 15879766 15879874 -69558606 + FRAM SINE Alu 6 114 -62 1233 151 5 32 chr17 15879874 15880093 -69558387 + AluJo SINE Alu 85 297 -15 34 34 0 17 chr17 15880134 15880164 -69558316 + AT_rich Low_complexity Low_complexity 1 31 -27 1259 192 51 11 chr17 15880164 15880288 -69558192 + AluJb SINE Alu 2 120 -192 369 0 0 0 chr17 15880288 15880329 -69558151 + (TAA)n Simple_repeat Simple_repeat 2 42 0 1259 192 51 11 chr17 15880329 15880480 -69558000 + AluJb SINE Alu 120 288 -24 34 34 0 17 chr17 15880480 15880508 -69557972 + AT_rich Low_complexity Low_complexity 31 58 0 2264 99 0 0 chr17 15880510 15880804 -69557676 + AluSx SINE Alu 1 294 -18 1919 124 3 13 chr17 15880963 15881278 -69557202 - AluSx SINE Alu 0 312 1 995 249 83 18 chr17 15881286 15881612 -69556868 + L2 LINE L2 2830 3176 -137 1503 203 26 7 chr17 15881612 15881918 -69556562 - AluJo SINE Alu 0 312 1 1980 115 42 0 chr17 15882008 15882296 -69556184 - AluSx SINE Alu -12 300 1 305 89 22 0 chr17 15883523 15883568 -69554912 - MLT1K LTR MaLR -108 480 435 656 208 13 26 chr17 15883577 15883731 -69554749 - L2 LINE L2 -1 3312 3161 1698 111 0 4 chr17 15883742 15883977 -69554503 + AluSx SINE Alu 9 242 -70 1886 63 4 0 chr17 15884078 15884316 -69554164 - AluY SINE Alu -72 239 1 537 302 44 0 chr17 15884322 15884504 -69553976 - L2 LINE L2 -609 2705 2516 2209 169 127 2 chr17 15884579 15885028 -69553452 + MLT1D LTR MaLR 1 505 0 898 263 0 0 chr17 15885100 15885159 -69553321 - MER3 DNA MER1_type 0 209 151 1815 135 0 96 chr17 15885159 15885492 -69552988 + AluJo SINE Alu 1 301 -1 898 263 0 0 chr17 15885492 15885641 -69552839 - MER3 DNA MER1_type -57 152 1 1639 159 0 18 chr17 15885695 15885978 -69552502 + AluJb SINE Alu 1 278 -34 207 0 0 0 chr17 15885982 15886005 -69552475 + (TAAA)n Simple_repeat Simple_repeat 1 23 0 473 295 84 32 chr17 15886046 15886236 -69552244 - MIR SINE MIR -51 211 12 294 170 0 0 chr17 15886242 15886295 -69552185 + L2 LINE L2 3004 3056 -216 180 97 0 0 chr17 15886392 15886423 -69552057 + (TTTAA)n Simple_repeat Simple_repeat 3 33 0 2195 84 3 0 chr17 15886423 15886708 -69551772 - AluSx SINE Alu -26 286 1 747 88 26 0 chr17 15886708 15886821 -69551659 - MER41A LTR ERV1 -438 116 1 1168 118 0 0 chr17 15886821 15886991 -69551489 - MER41A-int LTR ERV1 -2 5944 5775 2430 60 0 25 chr17 15886994 15887308 -69551172 - AluSp SINE Alu -7 306 1 1473 152 7 67 chr17 15887414 15887511 -69550969 + MER66B LTR ERV1 1 102 -384 2177 105 3 10 chr17 15887511 15887824 -69550656 - AluSx SINE Alu -1 311 1 1473 152 7 67 chr17 15887824 15888009 -69550471 + MER66B LTR ERV1 102 266 -220 2243 103 0 6 chr17 15888057 15888369 -69550111 + AluY SINE Alu 1 310 -1 180 125 0 0 chr17 15888374 15888406 -69550074 + (GAAA)n Simple_repeat Simple_repeat 2 33 0 398 141 14 14 chr17 15888426 15888497 -69549983 + MER66B LTR ERV1 400 470 -16 22 0 0 0 chr17 15888930 15888952 -69549528 + AT_rich Low_complexity Low_complexity 1 22 0 2053 106 3 3 chr17 15888959 15889280 -69549200 - AluSq SINE Alu 0 321 1 661 239 45 0 chr17 15889390 15889566 -69548914 + L2 LINE L2 2282 2465 -849 2347 57 7 0 chr17 15889591 15889888 -69548592 + AluY SINE Alu 1 299 -12 1684 162 7 30 chr17 15889891 15890194 -69548286 - AluJb SINE Alu -16 296 1 1895 149 7 0 chr17 15890341 15890636 -69547844 + AluSx SINE Alu 1 297 -15 215 267 313 8 chr17 15891563 15891694 -69546786 + MIR SINE MIR 34 204 -58 835 185 0 6 chr17 15891916 15892073 -69546407 + AluJb SINE Alu 140 295 -17 2281 77 7 0 chr17 15892077 15892376 -69546104 - AluSp SINE Alu -12 301 1 1202 97 0 51 chr17 15892823 15893018 -69545462 - AluY SINE Alu 0 311 127 318 106 0 0 chr17 15893020 15893067 -69545413 + Alu SINE Alu 248 294 -7 232 271 164 8 chr17 15893066 15893188 -69545292 - MLT1K LTR MaLR -43 545 405 * 511 342 48 42 chr17 15893277 15893610 -69544870 - MLT1K LTR MaLR -243 345 11 293 299 58 109 chr17 15893773 15894047 -69544433 + L2 LINE L2 3004 3263 -9 2005 147 3 6 chr17 15894050 15894363 -69544117 + AluJo SINE Alu 1 312 0 264 240 67 0 chr17 15895452 15895527 -69542953 + L1MC/D LINE L1 5575 5654 -2154 2203 93 0 0 chr17 15895733 15896024 -69542456 - AluSx SINE Alu -21 291 1 415 222 16 79 chr17 15896073 15896199 -69542281 + MIR SINE MIR 144 261 -1 350 239 14 2 chr17 15896292 15896377 -69542103 - MIR SINE MIR -95 113 27 2366 80 0 10 chr17 15896403 15896715 -69541765 - AluSp SINE Alu -4 309 1 366 199 98 64 chr17 15897286 15897328 -69541152 - MLT1J LTR MaLR -1 476 437 2345 81 0 13 chr17 15897328 15897635 -69540845 + AluY SINE Alu 1 303 -8 366 199 98 64 chr17 15897635 15897772 -69540708 - MLT1J LTR MaLR -40 437 257 1318 164 23 0 chr17 15897772 15897986 -69540494 - MER20 DNA MER1_type 0 219 1 366 199 98 64 chr17 15897986 15898002 -69540478 - MLT1J LTR MaLR -220 257 243 2074 130 7 0 chr17 15898111 15898418 -69540062 + AluSg SINE Alu 1 309 -1 1944 112 47 0 chr17 15898433 15898710 -69539770 + AluSx SINE Alu 1 290 -22 768 163 8 0 chr17 15898748 15898877 -69539603 - FLAM_C SINE Alu -1 142 13 419 311 13 13 chr17 15898990 15899141 -69539339 - L1ME3A LINE L1 -8 6162 6012 1247 171 24 0 chr17 15899210 15899421 -69539059 + MER20 DNA MER1_type 4 219 0 265 311 56 0 chr17 15899429 15899519 -69538961 + MLT1J2 LTR MaLR 266 360 -90 393 219 24 0 chr17 15899986 15900068 -69538412 - MIR SINE MIR -162 100 17 492 241 97 28 chr17 15900068 15900213 -69538267 - MER58B DNA MER1_type 0 341 187 1294 170 12 47 chr17 15900218 15900379 -69538101 - AluJo SINE Alu -15 297 147 2245 97 0 3 chr17 15900379 15900677 -69537803 - AluSx SINE Alu -15 297 1 1294 170 12 47 chr17 15900677 15900768 -69537712 - AluJo SINE Alu -165 147 54 1788 176 10 0 chr17 15900944 15901239 -69537241 + AluJb SINE Alu 1 298 -14 2210 79 0 0 chr17 15901264 15901542 -69536938 + AluSx SINE Alu 4 281 -31 875 212 36 18 chr17 15901940 15902162 -69536318 - MER46A DNA MER2_type -3 233 8 640 312 84 26 chr17 15902200 15902431 -69536049 + L2 LINE L2 2891 3147 -166 1787 109 72 0 chr17 15902431 15902731 -69535749 - AluSx SINE Alu 0 319 1 640 312 84 26 chr17 15902731 15902803 -69535677 + L2 LINE L2 3147 3213 -100 269 256 207 0 chr17 15902803 15902924 -69535556 + MIR SINE MIR 2 147 -115 1994 159 0 6 chr17 15902937 15903251 -69535229 + AluJb SINE Alu 1 312 0 2240 92 23 10 chr17 15903259 15903565 -69534915 + AluSq SINE Alu 2 311 -2 517 241 37 0 chr17 15903603 15903711 -69534769 + L2 LINE L2 3201 3312 -1 1756 131 69 10 chr17 15903764 15904054 -69534426 + AluJb SINE Alu 1 307 -5 1658 169 0 44 chr17 15904521 15904707 -69533773 - AluJo SINE Alu 0 311 142 2122 97 0 19 chr17 15904707 15905015 -69533465 - AluSc SINE Alu -7 302 1 1658 169 0 44 chr17 15905015 15905152 -69533328 - AluJo SINE Alu -169 142 1 2173 113 3 3 chr17 15905297 15905599 -69532881 + AluSx SINE Alu 1 302 -10 647 292 88 7 chr17 15905829 15906113 -69532367 - MLT1J2 LTR MaLR -143 307 1 1827 146 14 14 chr17 15906218 15906512 -69531968 + AluJo SINE Alu 2 295 -17 455 299 44 0 chr17 15906514 15906651 -69531829 - MIR SINE MIR -93 169 27 250 306 20 61 chr17 15906890 15906988 -69531492 - MER5B DNA MER1_type 0 178 85 2130 127 0 0 chr17 15907014 15907314 -69531166 - AluSx SINE Alu -12 300 1 300 253 0 0 chr17 15907623 15907698 -69530782 - MLT1K LTR MaLR 0 588 514 2152 109 0 0 chr17 15908030 15908343 -69530137 - AluSx SINE Alu 0 313 1 2009 89 28 18 chr17 15908354 15908636 -69529844 - AluSx SINE Alu -27 285 1 762 253 71 49 chr17 15909028 15909336 -69529144 - L2 LINE L2 -19 3294 2980 2113 101 7 26 chr17 15909371 15909677 -69528803 + AluSx SINE Alu 1 300 -12 437 222 35 7 chr17 15909777 15909921 -69528559 - MER33 DNA MER1_type -73 251 104 371 211 13 0 chr17 15909918 15909994 -69528486 - MER33 DNA MER1_type -247 77 1 * 430 203 73 0 chr17 15910004 15910127 -69528353 - L2 LINE L2 -343 2970 2839 2378 75 3 0 chr17 15910161 15910468 -69528012 - AluSp SINE Alu -5 308 1 210 366 0 0 chr17 15910549 15910620 -69527860 - L2 LINE L2 -524 2790 2720 207 283 0 19 chr17 15910654 15910707 -69527773 - MIR SINE MIR -185 77 26 1776 135 0 18 chr17 15910747 15911028 -69527452 + AluSx SINE Alu 1 276 -36 630 213 22 0 chr17 15911028 15911164 -69527316 + ERVL LTR ERVL 1478 1616 -4148 1916 128 10 3 chr17 15911165 15911454 -69527026 + AluJo SINE Alu 1 291 -21 198 235 103 22 chr17 15911544 15911680 -69526800 - L2 LINE L2 -211 3061 2915 1985 349 57 3 chr17 15911774 15912444 -69526036 - L1MB8 LINE L1 0 6178 5473 428 69 0 83 chr17 15912447 15912519 -69525961 + L1PA4 LINE L1 6088 6153 -2 1081 190 28 0 chr17 15912519 15912730 -69525750 + MER41-int LTR ERV1 452 668 -5278 1749 138 21 48 chr17 15912736 15912913 -69525567 - AluSx SINE Alu 0 309 129 180 0 0 0 chr17 15912913 15912933 -69525547 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 1910 116 22 0 chr17 15912942 15913209 -69525271 - AluSx SINE Alu -39 273 1 1749 138 21 48 chr17 15913209 15913338 -69525142 - AluSx SINE Alu -188 121 1 813 170 0 0 chr17 15913338 15913473 -69525007 - AluSq/x SINE Alu -178 135 1 774 305 82 10 chr17 15913473 15913765 -69524715 - L2 LINE L2 -7 3306 2994 1973 122 14 3 chr17 15914695 15915005 -69523475 - AluSx SINE Alu 0 312 1 256 309 122 16 chr17 15915067 15915190 -69523290 - MIR SINE MIR -10 252 117 386 377 23 9 chr17 15915383 15915598 -69522882 - MIR SINE MIR -24 238 21 1780 112 0 4 chr17 15915626 15915876 -69522604 - AluSx SINE Alu -8 304 56 250 368 0 8 chr17 15916115 15916240 -69522240 + CT-rich Low_complexity Low_complexity 1 124 0 259 299 169 47 chr17 15916514 15916641 -69521839 - MIR SINE MIR -62 146 32 228 271 35 12 chr17 15917131 15917216 -69521264 - L2 LINE L2 -321 2951 2865 616 289 30 64 chr17 15917242 15917540 -69520940 - L2 LINE L2 -8 3264 2977 456 288 15 15 chr17 15918056 15918188 -69520292 + MIR SINE MIR 32 163 -99 2162 103 10 0 chr17 15918188 15918489 -69519991 + AluSq SINE Alu 1 304 -9 202 211 0 0 chr17 15918854 15918892 -69519588 + (CA)n Simple_repeat Simple_repeat 1 38 0 291 326 35 35 chr17 15918996 15919137 -69519343 - MER5A DNA MER1_type -4 185 45 548 262 81 65 chr17 15920187 15920435 -69518045 - L2 LINE L2 -49 3223 2972 417 289 151 50 chr17 15921397 15921815 -69516665 - L2 LINE L2 0 3272 2813 226 301 98 24 chr17 15922020 15922143 -69516337 - MIR3 SINE MIR -63 145 14 278 273 10 40 chr17 15922335 15922434 -69516046 - L2 LINE L2 -47 3266 3171 1802 132 0 24 chr17 15922594 15922881 -69515599 + AluJo SINE Alu 15 294 -18 2133 108 7 0 chr17 15922881 15923175 -69515305 + AluSx SINE Alu 1 297 -15 228 245 20 0 chr17 15923555 15923604 -69514876 + L2 LINE L2 3226 3275 -38 388 271 51 0 chr17 15924122 15924240 -69514240 - MIR SINE MIR -126 136 13 441 230 26 0 chr17 15924733 15924846 -69513634 - MLT1K LTR MaLR -76 512 397 203 77 0 51 chr17 15925577 15925616 -69512864 + (TCTCTG)n Simple_repeat Simple_repeat 2 38 0 218 200 0 75 chr17 15925744 15925824 -69512656 + (TCTCTG)n Simple_repeat Simple_repeat 1 74 0 2283 99 0 3 chr17 15926730 15927033 -69511447 + AluSq SINE Alu 1 302 -11 1778 126 4 7 chr17 15927035 15927305 -69511175 + AluSx SINE Alu 44 312 0 930 273 121 13 chr17 15927432 15927881 -69510599 + L1M4 LINE L1 3391 3885 -2261 1726 184 0 3 chr17 15927881 15928175 -69510305 + AluJo SINE Alu 1 293 -19 895 121 66 0 chr17 15928176 15928342 -69510138 + LOR1a LTR ERV1 321 497 0 1400 114 19 84 chr17 15928370 15928632 -69509848 - AluJb SINE Alu 0 312 68 563 116 53 0 chr17 15928639 15928734 -69509746 - LOR1a LTR ERV1 -77 420 321 1074 181 0 0 chr17 15928735 15928906 -69509574 - AluSx SINE Alu -19 291 121 476 138 0 0 chr17 15928906 15928971 -69509509 - AluSx SINE Alu -247 65 1 2172 101 3 7 chr17 15928983 15929289 -69509191 - AluSp SINE Alu -8 305 1 403 288 76 36 chr17 15929322 15929470 -69509010 - L1ME3A LINE L1 -32 6133 5992 2163 105 3 0 chr17 15929470 15929764 -69508716 - AluSq SINE Alu -18 295 1 403 288 76 36 chr17 15929764 15929897 -69508583 - L1ME3A LINE L1 -173 5992 5833 181 264 91 16 chr17 15930010 15930131 -69508349 - L2 LINE L2 -211 3061 2932 2208 65 0 83 chr17 15930293 15930411 -69508069 + AluSp SINE Alu 1 127 -186 2219 48 0 4 chr17 15930411 15930684 -69507796 + AluY SINE Alu 39 310 -1 2208 65 0 83 chr17 15930684 15930890 -69507590 + AluSp SINE Alu 127 298 -15 2246 114 0 0 chr17 15930900 15931206 -69507274 + AluSg SINE Alu 1 306 -4 350 198 12 0 chr17 15931206 15931292 -69507188 - L1M4 LINE L1 -868 5278 5192 862 133 0 30 chr17 15931297 15931432 -69507048 - FLAM_C SINE Alu -12 131 1 1903 145 0 10 chr17 15931474 15931770 -69506710 - AluJb SINE Alu -19 293 1 1156 194 19 59 chr17 15931775 15931812 -69506668 - L1M4 LINE L1 -946 5200 5163 1800 154 11 4 chr17 15931812 15932113 -69506367 - AluJo SINE Alu 0 305 3 1156 194 19 59 chr17 15932113 15932445 -69506035 - L1M4 LINE L1 -983 5163 4845 2177 116 3 0 chr17 15932445 15932748 -69505732 + AluSx SINE Alu 1 304 -8 1156 107 0 30 chr17 15932748 15932917 -69505563 + AluSg/x SINE Alu 134 297 -15 1551 138 3 105 chr17 15932928 15933232 -69505248 - AluSx SINE Alu -39 273 1 390 340 40 13 chr17 15933390 15933540 -69504940 + MIR SINE MIR 104 257 -5 1985 132 0 7 chr17 15933738 15934025 -69504455 - AluSx SINE Alu -27 285 1 2154 123 0 0 chr17 15934152 15934453 -69504027 - AluSx SINE Alu -11 301 1 493 245 221 16 chr17 15934556 15934805 -69503675 - MLT1B LTR MaLR -24 366 67 269 48 24 0 chr17 15934916 15934958 -69503522 + HERVH LTR ERV1 3951 3993 -3720 3955 132 30 2 chr17 15934960 15935604 -69502876 + HERVH LTR ERV1 4488 5149 -2564 1247 134 18 5 chr17 15935605 15935822 -69502658 + HERVH LTR ERV1 5600 5819 -1894 * 2183 82 50 18 chr17 15935820 15936200 -69502280 + HERVH LTR ERV1 7322 7713 0 3221 77 25 9 chr17 15936200 15936641 -69501839 + LTR7 LTR ERV1 1 448 -2 3881 115 12 10 chr17 15936643 15937692 -69500788 + HERVH LTR ERV1 1 1239 -6474 882 72 30 48 chr17 15937792 15937958 -69500522 + HERVH LTR ERV1 7551 7713 0 3214 82 25 9 chr17 15937958 15938399 -69500081 + LTR7 LTR ERV1 1 448 -2 1307 184 90 17 chr17 15939179 15939467 -69499013 + AluJo SINE Alu 1 309 -3 2053 120 0 7 chr17 15939470 15939782 -69498698 + AluSx SINE Alu 1 310 0 1713 92 9 0 chr17 15939825 15940052 -69498428 + AluSq SINE Alu 1 229 -84 604 295 19 0 chr17 15940166 15940322 -69498158 + MIR SINE MIR 77 235 -27 1763 124 84 0 chr17 15940407 15940680 -69497800 - AluSx SINE Alu -16 296 1 2101 86 3 54 chr17 15940722 15941036 -69497444 - AluSx SINE Alu -14 298 1 247 289 0 0 chr17 15941064 15941140 -69497340 + (TG)n Simple_repeat Simple_repeat 1 76 0 2286 95 0 16 chr17 15941533 15941848 -69496632 + AluSx SINE Alu 1 310 -2 450 338 30 10 chr17 15942025 15942226 -69496254 - MIR SINE MIR -19 243 39 327 254 0 0 chr17 16042413 16042480 -69396000 + MER117 DNA MER1_type 97 163 -34 1385 151 91 47 chr17 16042530 16042848 -69395632 + THE1C LTR MaLR 1 332 -43 1038 124 7 7 chr17 16042948 16043101 -69395379 - AluSx SINE Alu -159 153 1 391 338 18 5 chr17 16043218 16043440 -69395040 - L1M4 LINE L1 -1098 5048 4824 282 290 117 6 chr17 16043555 16043717 -69394763 - L1M4 LINE L1 -1005 5141 4962 583 290 29 36 chr17 16043819 16044136 -69394344 + MLT1I LTR MaLR 91 450 0 299 316 11 0 chr17 16044169 16044343 -69394137 - L1M4 LINE L1 -1231 4915 4740 2225 105 3 3 chr17 16044343 16044639 -69393841 - AluY SINE Alu -15 296 1 552 278 68 18 chr17 16044649 16045185 -69393295 - L1M4 LINE L1 -1497 4649 4027 493 342 6 6 chr17 16045306 16045464 -69393016 + L1MEc LINE L1 148 305 -6091 782 315 83 15 chr17 16045471 16045880 -69392600 + L3 LINE CR1 1130 1566 -11 2271 83 28 0 chr17 16045943 16046233 -69392247 - AluY SINE Alu -13 298 1 243 0 0 0 chr17 16046353 16046380 -69392100 + (TG)n Simple_repeat Simple_repeat 2 28 0 927 189 6 6 chr17 16046383 16046552 -69391928 - AluJo SINE Alu -23 289 121 2090 106 20 3 chr17 16046757 16047049 -69391431 - AluSx SINE Alu -15 297 1 2348 86 13 0 chr17 16047049 16047352 -69391128 - AluSx SINE Alu -5 307 1 2599 47 7 0 chr17 16047358 16047657 -69390823 - AluY SINE Alu -10 301 1 233 297 0 0 chr17 16047744 16047808 -69390672 - L2 LINE L2 -347 2925 2862 414 0 0 0 chr17 16047808 16047854 -69390626 + (TG)n Simple_repeat Simple_repeat 2 47 0 21 0 0 0 chr17 16047994 16048015 -69390465 + AT_rich Low_complexity Low_complexity 1 21 0 310 343 9 0 chr17 16048943 16049048 -69389432 - L2 LINE L2 -11 3302 3197 1847 179 23 20 chr17 16049062 16049409 -69389071 + MLT2C1 LTR ERVL 1 348 -49 201 74 0 0 chr17 16049410 16049437 -69389043 + (TG)n Simple_repeat Simple_repeat 1 27 0 456 280 45 25 chr17 16049554 16049711 -69388769 + MIR SINE MIR 37 196 -66 212 292 101 11 chr17 16049728 16049817 -69388663 - MIR SINE MIR -150 112 16 284 305 23 0 chr17 16050074 16050177 -69388303 + MIR SINE MIR 55 160 -48 1542 130 59 6 chr17 16050674 16050984 -69387496 + LTR54 LTR ERV1 1 376 -134 241 152 152 30 chr17 16051011 16051077 -69387403 + MER57A LTR ERV1 330 403 0 346 219 0 0 chr17 16051283 16051356 -69387124 - MIR SINE MIR -15 247 175 552 126 41 84 chr17 16051836 16051977 -69386503 - L1 LINE L1 -780 5366 5232 271 185 19 0 chr17 16052001 16052055 -69386425 - L2 LINE L2 -68 3245 3191 180 111 0 0 chr17 16052088 16052115 -69386365 + (TGGA)n Simple_repeat Simple_repeat 4 30 0 762 241 58 10 chr17 16052537 16052744 -69385736 + L1ME1 LINE L1 4112 4328 -1818 3079 206 76 43 chr17 16052791 16053034 -69385446 + L1ME1 LINE L1 5073 5307 -859 1775 164 20 10 chr17 16053034 16053327 -69385153 + AluJo SINE Alu 1 296 -16 3079 206 76 43 chr17 16053327 16054127 -69384353 + L1ME1 LINE L1 5307 6151 -15 444 286 43 31 chr17 16054186 16054347 -69384133 + MIR SINE MIR 21 183 -79 224 272 310 19 chr17 16054740 16055001 -69383479 - L2 LINE L2 -417 2897 2561 243 286 20 51 chr17 16059963 16060061 -69378419 - L2 LINE L2 -221 3051 2957 21 0 0 0 chr17 16060974 16060995 -69377485 + AT_rich Low_complexity Low_complexity 1 21 0 424 181 14 0 chr17 16061019 16061091 -69377389 + 7SLRNA srpRNA srpRNA 12 84 -236 279 0 0 0 chr17 16061120 16061151 -69377329 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 21 36 0 0 chr17 16061249 16061277 -69377203 + AT_rich Low_complexity Low_complexity 1 28 0 21 57 0 0 chr17 16062471 16062506 -69375974 + AT_rich Low_complexity Low_complexity 1 35 0 257 233 105 0 chr17 16062741 16062827 -69375653 + L2 LINE L2 3219 3313 0 461 219 110 55 chr17 16062839 16063003 -69375477 - MIR SINE MIR -28 234 62 362 293 9 17 chr17 16063093 16063209 -69375271 - MIR SINE MIR -69 139 25 324 103 138 0 chr17 16063742 16063800 -69374680 - MER5A DNA MER1_type -120 69 4 410 302 69 35 chr17 16065200 16065488 -69372992 + L2 LINE L2 2903 3200 -72 192 180 40 40 chr17 16065754 16065804 -69372676 + MIR SINE MIR 97 146 -62 950 287 30 43 chr17 16065917 16066377 -69372103 + L1ME4a LINE L1 5486 5939 -182 216 97 0 0 chr17 16066940 16066971 -69371509 + (T)n Simple_repeat Simple_repeat 1 31 0 8694 100 21 25 chr17 16067274 16068579 -69369901 - HSMAR2 DNA Mariner -1 1301 1 467 289 88 18 chr17 16072019 16072247 -69366233 + MIR SINE MIR 2 245 -17 2176 106 7 0 chr17 16073277 16073570 -69364910 - AluSx SINE Alu -17 295 1 252 0 0 0 chr17 16073675 16073703 -69364777 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 216 0 0 0 chr17 16074278 16074302 -69364178 + (T)n Simple_repeat Simple_repeat 1 24 0 2294 89 0 3 chr17 16074805 16075098 -69363382 + AluSg1 SINE Alu 1 292 -17 2137 136 0 0 chr17 16075610 16075911 -69362569 - AluSq SINE Alu -12 301 1 2453 81 3 0 chr17 16076173 16076470 -69362010 + AluY SINE Alu 1 298 -13 2326 107 0 0 chr17 16077042 16077351 -69361129 + AluSc SINE Alu 1 309 0 1745 101 8 36 chr17 16077920 16078168 -69360312 - AluSq SINE Alu -72 241 1 2247 98 0 23 chr17 16079329 16079636 -69358844 + AluSc SINE Alu 2 301 -8 747 201 6 13 chr17 16079836 16079995 -69358485 - MIR SINE MIR -98 164 7 215 338 0 0 chr17 16080277 16080345 -69358135 + L2 LINE L2 3205 3272 0 303 150 0 0 chr17 16080346 16080406 -69358074 + (TGGA)n Simple_repeat Simple_repeat 3 62 0 519 234 37 107 chr17 16080753 16080877 -69357603 + MIR SINE MIR 34 165 -97 2302 115 0 0 chr17 16080877 16081173 -69357307 + AluSc SINE Alu 1 296 -13 519 234 37 107 chr17 16081173 16081220 -69357260 + MIR SINE MIR 165 186 -76 1164 184 14 5 chr17 16081220 16081437 -69357043 + MER20 DNA MER1_type 1 219 0 519 234 37 107 chr17 16081437 16081508 -69356972 + MIR SINE MIR 186 260 -2 642 232 16 54 chr17 16081765 16081917 -69356563 + MIR SINE MIR 8 153 -109 2597 50 0 0 chr17 16081917 16082214 -69356266 + AluY SINE Alu 1 297 -14 642 232 16 54 chr17 16082214 16082246 -69356234 + MIR SINE MIR 153 185 -77 1006 281 100 75 chr17 16082495 16082750 -69355730 + L1ME4a LINE L1 3947 4194 -1952 2330 86 3 13 chr17 16082750 16083053 -69355427 + AluSc SINE Alu 1 300 -9 1006 281 100 75 chr17 16083053 16083110 -69355370 + L1ME4a LINE L1 4194 4248 -1898 2636 61 0 0 chr17 16083110 16083421 -69355059 + AluY SINE Alu 1 311 0 1006 281 100 75 chr17 16083421 16083813 -69354667 + L1ME4a LINE L1 4248 4629 -1517 2491 73 0 0 chr17 16083813 16084115 -69354365 + AluY SINE Alu 1 302 -9 1006 281 100 75 chr17 16084115 16084507 -69353973 + L1ME4a LINE L1 4629 5072 -1074 2636 23 7 3 chr17 16084607 16084908 -69353572 - AluY SINE Alu -8 303 2 1880 85 101 4 chr17 16084908 16085166 -69353314 - AluSp SINE Alu -30 283 1 927 196 20 20 chr17 16085235 16085434 -69353046 + MLT2D LTR ERVL 216 414 0 1107 296 68 43 chr17 16085434 16085773 -69352707 + L1ME4a LINE L1 5380 5740 -430 2234 91 0 26 chr17 16085773 16086080 -69352400 + AluY SINE Alu 1 299 -12 1107 296 68 43 chr17 16086080 16086298 -69352182 + L1ME4a LINE L1 5740 5951 -219 2441 55 0 10 chr17 16086528 16086819 -69351661 - AluY SINE Alu -23 288 1 270 284 0 0 chr17 16087661 16087728 -69350752 + MER103 DNA DNA 98 164 -2 280 217 17 0 chr17 16087990 16088050 -69350430 + MER94 DNA DNA 2 62 -72 868 178 13 13 chr17 16088050 16088207 -69350273 - FRAM SINE Alu -16 160 4 1254 177 5 9 chr17 16088299 16088519 -69349961 + AluSg/x SINE Alu 72 290 -20 308 264 0 22 chr17 16088572 16088663 -69349817 + L1MC4 LINE L1 6615 6703 -1339 329 310 46 23 chr17 16089098 16089272 -69349208 + L1ME4a LINE L1 5944 6121 0 2434 81 0 3 chr17 16090145 16090442 -69348038 - AluSc SINE Alu -13 296 1 2217 114 0 0 chr17 16090446 16090736 -69347744 - AluSq SINE Alu -23 290 1 191 328 0 0 chr17 16090828 16090886 -69347594 - MIR SINE MIR -60 148 91 184 183 0 42 chr17 16090918 16090989 -69347491 + CT-rich Low_complexity Low_complexity 4 71 0 299 304 45 9 chr17 16091494 16091606 -69346874 + MIR SINE MIR 32 147 -61 2367 104 0 13 chr17 16091828 16092144 -69346336 - AluSx SINE Alu 0 312 1 3614 106 66 2 chr17 16092163 16092708 -69345772 - LTR19B LTR ERV1 0 580 1 281 130 8 4 chr17 16092903 16092957 -69345523 + MIR SINE MIR 103 158 -50 2421 86 3 0 chr17 16093001 16093304 -69345176 - AluY SINE Alu -7 304 1 707 241 37 87 chr17 16093307 16093606 -69344874 + MER102a DNA MER1_type 33 316 -14 2390 56 0 33 chr17 16094208 16094512 -69343968 + AluY SINE Alu 1 294 -17 191 88 29 0 chr17 16094810 16094844 -69343636 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 2482 44 0 20 chr17 16096180 16096476 -69342004 - AluY SINE Alu -21 290 1 410 258 11 86 chr17 16096556 16096742 -69341738 + L1MC5 LINE L1 7742 7913 -48 2314 68 37 3 chr17 16097300 16097595 -69340885 - AluY SINE Alu -6 305 1 2146 120 16 0 chr17 16098144 16098452 -69340028 - AluSq SINE Alu 0 313 1 2431 72 0 25 chr17 16098505 16098823 -69339657 + AluY SINE Alu 1 310 -1 202 353 8 17 chr17 16099019 16099138 -69339342 + MIR3 SINE MIR 83 200 -8 2230 167 38 40 chr17 16099453 16099879 -69338601 + MSTB1 LTR MaLR 1 425 -7 698 199 58 89 chr17 16099955 16100030 -69338450 + MER5A DNA MER1_type 3 79 -110 2230 85 17 10 chr17 16100030 16100323 -69338157 + AluSg SINE Alu 1 295 -15 698 199 58 89 chr17 16100323 16100438 -69338042 + MER5A DNA MER1_type 79 187 -2 385 228 0 148 chr17 16102176 16102325 -69336155 + MIR SINE MIR 48 174 -88 2332 104 3 0 chr17 16102856 16103163 -69335317 - AluSx SINE Alu -4 308 1 2464 44 10 17 chr17 16103569 16103867 -69334613 + AluY SINE Alu 1 296 -15 277 365 60 18 chr17 16104380 16104547 -69333933 + MIR SINE MIR 20 193 -69 2583 52 0 13 chr17 16104682 16104992 -69333488 + AluY SINE Alu 1 306 -5 2118 94 4 7 chr17 16106382 16106657 -69331823 - AluSg SINE Alu -19 291 18 405 71 0 0 chr17 16106657 16106703 -69331777 - Alu SINE Alu -263 50 2 735 128 8 0 chr17 16106962 16107079 -69331401 - MSTB1 LTR MaLR 0 432 315 698 147 9 0 chr17 16107080 16107196 -69331284 - MSTB1 LTR MaLR -308 118 2 920 307 111 51 chr17 16107196 16107462 -69331018 + L3 LINE CR1 156 404 -1173 2082 118 31 0 chr17 16107462 16107750 -69330730 - AluSx SINE Alu -15 297 1 920 307 111 51 chr17 16107750 16107975 -69330505 + L3 LINE CR1 404 694 -883 2524 58 0 0 chr17 16107975 16108267 -69330213 + AluY SINE Alu 1 292 -19 920 307 111 51 chr17 16108267 16108386 -69330094 + L3 LINE CR1 694 804 -773 294 293 155 60 chr17 16108662 16108997 -69329483 + L3 LINE CR1 1128 1494 -83 2442 57 0 0 chr17 16109081 16109395 -69329085 + AluY SINE Alu 1 314 0 748 277 41 67 chr17 16109401 16109433 -69329047 + MIR SINE MIR 2 33 -229 2844 13 0 0 chr17 16109433 16109737 -69328743 + AluY SINE Alu 1 304 -7 748 277 41 67 chr17 16109737 16109971 -69328509 + MIR SINE MIR 33 261 -1 2406 77 0 3 chr17 16110110 16110408 -69328072 + AluSg SINE Alu 1 297 -13 225 108 0 0 chr17 16111445 16111482 -69326998 + (TTCA)n Simple_repeat Simple_repeat 1 37 0 505 318 131 32 chr17 16111642 16112409 -69326071 + L2 LINE L2 2371 3207 -106 1456 175 15 41 chr17 16112536 16112804 -69325676 + AluJb SINE Alu 28 288 -24 745 196 110 0 chr17 16112835 16112998 -69325482 + Tigger2 DNA MER2_type 2528 2708 -10 1375 232 41 6 chr17 16113102 16113443 -69325037 + L1MD3 LINE L1 7633 7985 -10 2254 97 47 0 chr17 16114089 16114387 -69324093 + AluSx SINE Alu 1 312 0 2298 100 0 7 chr17 16115523 16115822 -69322658 - AluSg SINE Alu -13 297 1 2348 88 0 28 chr17 16115895 16116030 -69322450 + AluSg1 SINE Alu 1 138 -171 2431 77 0 3 chr17 16116030 16116328 -69322152 + AluY SINE Alu 1 297 -14 2523 76 0 3 chr17 16116330 16116644 -69321836 + AluSp SINE Alu 1 313 0 2348 88 0 28 chr17 16116644 16116822 -69321658 + AluSg1 SINE Alu 139 308 -1 354 222 182 0 chr17 16117014 16117113 -69321367 + L1ME4a LINE L1 5990 6106 -15 280 311 11 11 chr17 16117162 16117252 -69321228 - MIR3 SINE MIR -15 193 104 228 359 82 18 chr17 16117631 16117851 -69320629 + L2 LINE L2 2826 3059 -213 280 236 0 42 chr17 16118448 16118520 -69319960 + L3 LINE CR1 1504 1572 -5 7035 66 29 50 chr17 16119015 16120254 -69318226 + SVA Other Other 432 1386 0 2105 71 8 0 chr17 16120273 16120526 -69317954 + AluY SINE Alu 1 255 -56 189 107 0 0 chr17 16120683 16120711 -69317769 + (GGGA)n Simple_repeat Simple_repeat 2 29 0 1677 174 28 0 chr17 16121028 16121310 -69317170 - AluJb SINE Alu -4 308 19 695 241 231 0 chr17 16121943 16122155 -69316325 - MIR SINE MIR 0 262 2 203 88 29 0 chr17 16123730 16123764 -69314716 + (TGGA)n Simple_repeat Simple_repeat 2 36 0 2170 141 0 3 chr17 16123829 16124126 -69314354 - AluSx SINE Alu -16 296 1 3059 118 45 19 chr17 16125092 16125689 -69312791 + MER4B LTR ERV1 1 779 0 469 235 154 0 chr17 16125885 16126034 -69312446 - MER21B LTR ERV1 -11 852 681 * 1667 190 18 70 chr17 16126028 16126166 -69312314 - MER21B LTR ERV1 -423 440 296 2257 109 0 13 chr17 16126166 16126469 -69312011 - AluSx SINE Alu -10 302 4 1667 190 18 70 chr17 16126469 16126772 -69311708 - MER21B LTR ERV1 -567 296 22 2277 116 0 0 chr17 16126777 16127096 -69311384 - AluSg SINE Alu 0 319 1 386 279 19 62 chr17 16127112 16127273 -69311207 + MIR SINE MIR 102 255 -7 180 111 0 0 chr17 16127542 16127569 -69310911 + (A)n Simple_repeat Simple_repeat 1 27 0 196 302 83 52 chr17 16128463 16128559 -69309921 + MIR SINE MIR 37 135 -127 2382 79 7 23 chr17 16128949 16129254 -69309226 - AluSx SINE Alu -12 300 1 321 26 0 0 chr17 16129796 16129834 -69308646 + (CA)n Simple_repeat Simple_repeat 1 38 0 2398 52 0 7 chr17 16129926 16130260 -69308220 + AluY SINE Alu 1 311 0 2200 105 3 0 chr17 16131273 16131568 -69306912 - AluY SINE Alu -15 296 1 207 190 17 35 chr17 16132817 16132875 -69305605 + (CAGAGA)n Simple_repeat Simple_repeat 3 59 0 2339 79 6 41 chr17 16134119 16134435 -69304045 - AluSg SINE Alu -1 309 5 2305 98 10 0 chr17 16134438 16134743 -69303737 - AluSx SINE Alu -4 308 1 199 237 102 0 chr17 16134847 16134906 -69303574 - L3 LINE CR1 -936 641 577 2170 153 31 26 chr17 16134944 16135361 -69303119 + MSTB1 LTR MaLR 1 419 -13 2059 141 91 16 chr17 16135378 16135741 -69302739 - MLT1B LTR MaLR 0 390 1 3273 80 19 14 chr17 16136418 16136903 -69301577 + LTR15 LTR ERV1 1 487 -6 2518 55 0 0 chr17 16137562 16137852 -69300628 - AluY SINE Alu -17 294 5 408 306 105 15 chr17 16138346 16138689 -69299791 + L2 LINE L2 309 682 -2632 1757 149 6 78 chr17 16138713 16139048 -69299432 - AluJb SINE Alu -1 311 1 252 171 0 0 chr17 16139175 16139216 -69299264 - FAM SINE Alu -13 166 126 1050 181 0 0 chr17 16139217 16139383 -69299097 - FRAM SINE Alu 0 166 1 1918 136 12 6 chr17 16139384 16139707 -69298773 - L1MB3 LINE L1 -41 6142 5818 2707 52 0 0 chr17 16142599 16142908 -69295572 + AluY SINE Alu 1 309 -2 400 250 78 23 chr17 16143054 16143182 -69295298 + MIR SINE MIR 32 166 -96 303 359 0 0 chr17 16144729 16144821 -69293659 - MIR SINE MIR -122 140 49 181 294 64 55 chr17 16145262 16145371 -69293109 - L2 LINE L2 -1 3312 3203 373 313 123 6 chr17 16145453 16145632 -69292848 + MLT1L LTR MaLR 363 562 -53 606 114 0 0 chr17 16146406 16146485 -69291995 + AluS SINE Alu 5 83 -229 2326 103 10 0 chr17 16146735 16147036 -69291444 + AluSx SINE Alu 1 304 -8 2316 104 10 0 chr17 16147213 16147521 -69290959 + AluY SINE Alu 1 311 0 1192 324 77 26 chr17 16147568 16148219 -69290261 + L2 LINE L2 2019 2702 -612 829 178 0 0 chr17 16148231 16148360 -69290120 - FLAM_C SINE Alu 0 133 5 355 259 24 41 chr17 16148375 16148395 -69290085 - L1MA10 LINE L1 -2 6332 6313 1736 221 14 18 chr17 16148395 16148835 -69289645 - L1ME2 LINE L1 -9 6155 5718 355 256 41 25 chr17 16148835 16148956 -69289524 - L1MEc LINE L1 -3846 2369 2247 1680 215 87 34 chr17 16149078 16149525 -69288955 + Charlie1a DNA MER1_type 1 471 -984 679 150 39 20 chr17 16149767 16149920 -69288560 - L1MC3 LINE L1 -97 7688 7533 891 295 23 9 chr17 16150043 16150385 -69288095 - L1MEc LINE L1 -6014 382 36 484 306 126 22 chr17 16150400 16150622 -69287858 + L2 LINE L2 2702 2946 -368 387 264 187 31 chr17 16150856 16151436 -69287044 + L1MC4a LINE L1 5224 5568 -756 1203 165 9 5 chr17 16151760 16151972 -69286508 - MER20 DNA MER1_type -5 214 2 276 360 40 0 chr17 16152533 16152633 -69285847 + MIR3 SINE MIR 94 197 -11 1592 172 18 14 chr17 16154435 16154735 -69283745 + AluJo SINE Alu 2 302 0 2449 72 0 0 chr17 16156072 16156363 -69282117 + AluSc SINE Alu 1 291 -18 617 221 116 88 chr17 16156424 16156777 -69281703 + LTR52 LTR ERVL 1 363 -58 504 193 15 7 chr17 16157714 16157849 -69280631 + (TA)n Simple_repeat Simple_repeat 1 136 0 590 290 34 85 chr17 16157918 16158076 -69280404 + L2 LINE L2 2174 2339 -975 984 156 177 0 chr17 16158076 16158262 -69280218 - MER20 DNA MER1_type 0 219 1 590 290 34 85 chr17 16158262 16158407 -69280073 + L2 LINE L2 2339 2453 -861 2538 68 0 3 chr17 16158407 16158717 -69279763 - AluY SINE Alu -2 309 1 590 290 34 85 chr17 16158717 16158822 -69279658 + L2 LINE L2 2453 2562 -752 2478 70 0 7 chr17 16159918 16160219 -69278261 + AluY SINE Alu 1 299 -12 1020 233 137 32 chr17 16160334 16160707 -69277773 + MLT1J1 LTR MaLR 15 426 -20 2094 100 20 23 chr17 16160861 16161161 -69277319 - AluSx SINE Alu -13 299 1 2662 45 0 0 chr17 16161638 16161946 -69276534 + AluY SINE Alu 1 308 -3 225 286 29 14 chr17 16163226 16163296 -69275184 - MIR3 SINE MIR -17 191 121 342 193 80 23 chr17 16163469 16163557 -69274923 + L2 LINE L2 3180 3272 0 508 261 182 20 chr17 16163939 16164142 -69274338 + MIR SINE MIR 22 257 -5 242 296 141 3 chr17 16165414 16165541 -69272939 + MIR3 SINE MIR 4 144 -78 405 247 69 23 chr17 16165560 16165734 -69272746 - MIR SINE MIR 0 262 81 283 216 62 21 chr17 16166288 16166385 -69272095 + AluYb8 SINE Alu 208 308 0 2247 77 7 14 chr17 16166424 16166721 -69271759 - AluSx SINE Alu -17 295 1 5359 232 36 28 chr17 16166721 16166961 -69271519 - L1M2c LINE L1 -4824 1965 1728 2340 67 0 54 chr17 16166961 16167275 -69271205 - AluY SINE Alu -14 297 1 5359 232 36 28 chr17 16167275 16167380 -69271100 - L1M2c LINE L1 -5061 1728 1625 559 13 26 13 chr17 16167380 16167456 -69271024 + (TTTC)n Simple_repeat Simple_repeat 2 78 0 1874 125 18 14 chr17 16167457 16167736 -69270744 - AluSx SINE Alu -32 280 1 5359 232 36 28 chr17 16167736 16167928 -69270552 - L1M2c LINE L1 -5164 1625 1436 2119 124 0 0 chr17 16167928 16168218 -69270262 + AluSg SINE Alu 1 290 -20 5359 232 36 28 chr17 16168218 16169931 -69268549 - L1M2c LINE L1 -5353 1436 14 775 309 121 62 chr17 16169998 16170154 -69268326 - L1MDa LINE L1 -2196 4344 4199 2320 102 7 0 chr17 16170154 16170458 -69268022 + AluSx SINE Alu 1 306 -6 775 309 121 62 chr17 16170458 16170469 -69268011 - L1MDa LINE L1 -2341 4199 4190 2239 94 0 29 chr17 16170469 16170776 -69267704 + AluY SINE Alu 1 298 -13 2042 52 135 0 chr17 16170778 16171045 -69267435 + AluY SINE Alu 1 303 -8 775 309 121 62 chr17 16171045 16171588 -69266892 - L1MDa LINE L1 -2350 4190 3540 2189 114 0 0 chr17 16171588 16171869 -69266611 - AluSx SINE Alu -31 281 1 775 309 121 62 chr17 16171869 16172253 -69266227 - L1MDa LINE L1 -3000 3540 3180 1147 181 48 48 chr17 16172259 16172519 -69265961 + MER33 DNA MER1_type 1 263 -2322 2541 50 0 3 chr17 16172519 16172821 -69265659 + AluY SINE Alu 1 301 -10 1147 181 48 48 chr17 16172821 16172870 -69265610 + MER33 DNA MER1_type 262 310 -14 273 290 43 38 chr17 16172927 16173151 -69265329 - L1MDa LINE L1 -3404 3136 2911 3465 219 74 56 chr17 16173203 16175123 -69263357 + L1MDb LINE L1 16 2004 -4402 2365 98 0 0 chr17 16175166 16175461 -69263019 - AluSg SINE Alu -15 295 1 23 0 0 0 chr17 16175461 16175484 -69262996 + AT_rich Low_complexity Low_complexity 1 23 0 2425 87 0 0 chr17 16175627 16175927 -69262553 - AluSc SINE Alu -9 300 1 321 239 68 68 chr17 16175938 16176101 -69262379 - L1MDa LINE L1 -3937 2603 2441 2206 115 10 0 chr17 16176138 16176442 -69262038 - AluSx SINE Alu -5 307 1 2542 84 0 0 chr17 16176615 16176926 -69261554 - AluSx SINE Alu -1 311 1 2068 109 0 82 chr17 16176926 16177103 -69261377 - AluSx SINE Alu -16 296 154 2200 119 13 13 chr17 16177103 16177415 -69261065 - AluSx SINE Alu 0 312 1 2068 109 0 82 chr17 16177415 16177558 -69260922 - AluSx SINE Alu -158 154 1 4271 134 54 0 chr17 16177559 16178223 -69260257 + L1MA4A LINE L1 5594 6293 -10 190 304 0 0 chr17 16178266 16178322 -69260158 - L2 LINE L2 0 3313 3258 2555 56 3 0 chr17 16179030 16179332 -69259148 - AluY SINE Alu -8 303 1 356 313 154 5 chr17 16179488 16179696 -69258784 - HAL1 LINE L1 -1013 1494 1256 1389 240 105 12 chr17 16180160 16180646 -69257834 - MLT1E LTR MaLR -3 590 21 519 338 84 26 chr17 16180692 16181035 -69257445 - L2 LINE L2 -561 2753 2391 260 264 83 58 chr17 16182718 16182839 -69255641 - MER5A DNA MER1_type -22 167 44 2085 131 3 0 chr17 16183823 16184121 -69254359 + AluY SINE Alu 1 299 -12 2258 101 13 0 chr17 16184215 16184513 -69253967 + AluSx SINE Alu 1 302 -10 537 299 118 88 chr17 16184719 16185244 -69253236 - MLT1K LTR MaLR -2 586 46 28 0 0 0 chr17 16186034 16186062 -69252418 + AT_rich Low_complexity Low_complexity 1 28 0 26 30 0 0 chr17 16186887 16186920 -69251560 + GC_rich Low_complexity Low_complexity 1 33 0 22 0 0 0 chr17 16186937 16186959 -69251521 + GC_rich Low_complexity Low_complexity 1 22 0 611 233 55 25 chr17 16187122 16187324 -69251156 - L1MC4a LINE L1 -2 7806 7599 337 277 153 36 chr17 16187327 16187601 -69250879 - L1M4 LINE L1 -2997 3149 2844 314 339 62 0 chr17 16187868 16187998 -69250482 - HAL1b LINE L1 -620 728 591 256 136 51 51 chr17 16188668 16188727 -69249753 - MLT1K LTR MaLR -8 580 522 603 270 176 30 chr17 16188797 16189030 -69249450 - MLT1K LTR MaLR -176 412 146 2440 56 20 7 chr17 16189141 16189443 -69249037 + AluY SINE Alu 1 306 -5 901 133 0 22 chr17 16189852 16189987 -69248493 + FLAM_C SINE Alu 2 133 0 25 0 0 0 chr17 16189990 16190015 -69248465 + AT_rich Low_complexity Low_complexity 1 25 0 24 0 0 0 chr17 16190322 16190346 -69248134 + AT_rich Low_complexity Low_complexity 1 24 0 2281 261 52 3 chr17 16190487 16191135 -69247345 - L1ME3A LINE L1 -51 6119 5440 2333 108 0 6 chr17 16191190 16191504 -69246976 + AluSx SINE Alu 1 312 0 349 247 55 55 chr17 16191650 16191796 -69246684 - L1ME3A LINE L1 -271 5899 5754 485 237 78 63 chr17 16191852 16192229 -69246251 - L1ME3A LINE L1 -517 5653 5189 362 342 107 4 chr17 16192371 16192596 -69245884 - L1ME3A LINE L1 -1158 4988 4741 2239 88 7 7 chr17 16192900 16193194 -69245286 - AluSg SINE Alu -16 294 1 360 287 33 16 chr17 16193448 16193568 -69244912 - MER102b DNA MER1_type -2 339 218 683 255 60 0 chr17 16193568 16193752 -69244728 - MER58A DNA MER1_type 0 224 30 2422 74 0 3 chr17 16193856 16194153 -69244327 - AluY SINE Alu -14 297 2 635 339 125 34 chr17 16194269 16194923 -69243557 + L2 LINE L2 2165 2878 -436 4913 201 91 26 chr17 16194926 16195091 -69243389 - Charlie1 DNA MER1_type -1 2760 2607 829 180 0 0 chr17 16195091 16195219 -69243261 + FLAM_C SINE Alu 1 128 -5 4913 201 91 26 chr17 16195219 16196397 -69242083 - Charlie1 DNA MER1_type -154 2607 5 636 257 33 71 chr17 16196449 16196659 -69241821 - MIR SINE MIR -5 257 56 288 254 15 0 chr17 16196713 16196780 -69241700 + L2 LINE L2 3237 3304 -9 893 294 43 29 chr17 16197116 16197531 -69240949 - L1MC4a LINE L1 -1741 6067 5647 2429 82 0 7 chr17 16199913 16200216 -69238264 - AluY SINE Alu -9 302 2 2382 158 80 5 chr17 16200717 16201115 -69237365 - MSTA LTR MaLR 0 428 1 216 97 0 0 chr17 16201121 16201152 -69237328 + (A)n Simple_repeat Simple_repeat 1 31 0 643 279 6 36 chr17 16201211 16201376 -69237104 + MER58A DNA MER1_type 1 160 0 1698 169 55 23 chr17 16201389 16201696 -69236784 - MLT1A1 LTR MaLR -30 335 19 377 194 0 14 chr17 16201705 16201777 -69236703 + MER58A DNA MER1_type 154 224 0 492 261 124 56 chr17 16202005 16202224 -69236256 + MIR SINE MIR 10 236 -26 2408 89 3 0 chr17 16203098 16203400 -69235080 + AluSp SINE Alu 1 303 -10 2155 77 70 0 chr17 16203620 16203892 -69234588 + AluSc SINE Alu 1 291 -18 539 298 80 46 chr17 16204333 16204682 -69233798 - MLT1K LTR MaLR -153 435 75 2464 75 3 7 chr17 16204851 16205156 -69233324 + AluY SINE Alu 1 304 -7 2608 63 0 0 chr17 16205558 16205861 -69232619 - AluY SINE Alu -8 303 1 311 238 24 24 chr17 16205877 16205961 -69232519 - MLT1K LTR MaLR -92 496 413 459 0 0 0 chr17 16206397 16206448 -69232032 + (TA)n Simple_repeat Simple_repeat 1 51 0 23 68 0 0 chr17 16206604 16206648 -69231832 + AT_rich Low_complexity Low_complexity 1 44 0 3177 176 16 13 chr17 16206901 16207457 -69231023 - MER68 LTR ERV1 -4 558 1 3796 243 66 24 chr17 16207653 16208943 -69229537 + L1MC4 LINE L1 6694 8037 -5 2141 100 0 0 chr17 16209107 16209420 -69229060 - AluY SINE Alu 0 313 1 2059 65 34 74 chr17 16209447 16209770 -69228710 - AluY SINE Alu -1 310 1 1224 79 12 12 chr17 16209940 16210105 -69228375 - AluSp SINE Alu -7 306 142 2013 114 0 14 chr17 16210105 16210386 -69228094 - AluSq SINE Alu -36 277 1 430 298 73 29 chr17 16210391 16210596 -69227884 + L1ME3A LINE L1 5360 5573 -589 944 122 47 122 chr17 16210602 16210644 -69227836 - L1MA8 LINE L1 -7 6284 6240 186 43 0 0 chr17 16210644 16210667 -69227813 + (CA)n Simple_repeat Simple_repeat 2 24 0 944 122 47 122 chr17 16210667 16210902 -69227578 - L1MA8 LINE L1 -51 6240 6028 1154 262 62 62 chr17 16210921 16211146 -69227334 + L1ME3A LINE L1 5600 5824 -346 2421 80 0 7 chr17 16211146 16211447 -69227033 + AluY SINE Alu 1 299 -12 1154 262 62 62 chr17 16211447 16211782 -69226698 + L1ME3A LINE L1 5823 6160 -10 578 242 96 19 chr17 16212370 16212656 -69225824 - MLT2F LTR ERVL -86 577 202 248 0 31 0 chr17 16212656 16212688 -69225792 + (TG)n Simple_repeat Simple_repeat 1 33 0 214 329 14 0 chr17 16214068 16214138 -69224342 + (CACG)n Simple_repeat Simple_repeat 2 72 0 242 145 16 65 chr17 16214438 16214500 -69223980 - SN5 Other centromeric -77 378 320 265 195 0 23 chr17 16214949 16215036 -69223444 - HSAT5 Satellite Satellite -1 85 1 298 230 0 29 chr17 16215067 16215168 -69223312 - HSAT5 Satellite Satellite -1 98 1 258 165 10 134 chr17 16215930 16216027 -69222453 - SN5 Other centromeric -77 378 294 989 321 38 21 chr17 16221162 16221829 -69216651 + L1MC3 LINE L1 5479 6156 -1629 192 158 0 0 chr17 16225589 16225627 -69212853 + CT-rich Low_complexity Low_complexity 2 39 0 2227 83 10 3 chr17 16225663 16225951 -69212529 + AluY SINE Alu 5 294 -17 3424 161 17 3 chr17 16227583 16228246 -69210234 - L1 LINE L1 -1306 4840 4169 581 164 24 212 chr17 16228266 16228431 -69210049 - MLT1E2 LTR MaLR -189 465 284 340 217 61 75 chr17 16228606 16228772 -69209708 - MLT1-int LTR MaLR -69 1666 1140 2870 102 64 115 chr17 16228781 16229406 -69209074 - LTR14B LTR ERVK 0 608 16 2013 100 79 0 chr17 16229477 16229757 -69208723 + AluSp SINE Alu 1 302 -11 345 47 0 0 chr17 16229757 16229800 -69208680 + (TA)n Simple_repeat Simple_repeat 1 43 0 507 118 97 0 chr17 16230593 16230686 -69207794 - AluSp/q SINE Alu 0 313 212 244 60 113 151 chr17 16231893 16232078 -69206402 + (CTGGGG)n Simple_repeat Simple_repeat 1 178 0 28 0 0 0 chr17 16233177 16233205 -69205275 + AT_rich Low_complexity Low_complexity 1 28 0 789 212 20 6 chr17 16233304 16233606 -69204874 - MLT1A2 LTR MaLR 0 374 1 602 174 87 31 chr17 16234140 16234301 -69204179 + MER3 DNA MER1_type 19 188 -21 2272 109 23 0 chr17 16234504 16234806 -69203674 + AluSg SINE Alu 1 309 -1 1153 92 7 0 chr17 16234890 16235042 -69203438 - AluSg/x SINE Alu -1 309 157 1670 198 0 3 chr17 16235123 16235421 -69203059 - AluJb SINE Alu -15 297 1 22 70 0 0 chr17 16235664 16235707 -69202773 + AT_rich Low_complexity Low_complexity 1 43 0 2265 101 7 0 chr17 16235713 16236009 -69202471 - AluSx SINE Alu -14 298 1 333 47 0 0 chr17 16236278 16236321 -69202159 + (CA)n Simple_repeat Simple_repeat 2 44 0 1157 127 0 0 chr17 16237038 16237196 -69201284 + AluSp SINE Alu 138 295 -18 218 56 28 0 chr17 16237854 16237890 -69200590 + (TTTA)n Simple_repeat Simple_repeat 2 38 0 1577 95 5 9 chr17 16238119 16238330 -69200150 - AluSq SINE Alu -17 296 87 295 305 130 25 chr17 16238696 16238896 -69199584 - MER69 DNA AcHobo -1989 537 317 364 285 28 39 chr17 16238931 16239110 -69199370 - MER69 DNA AcHobo -2319 207 31 218 286 95 0 chr17 16239822 16239885 -69198595 + L2 LINE L2 3148 3216 -56 315 250 143 0 chr17 16239997 16240081 -69198399 - MIR SINE MIR -117 145 50 316 228 39 47 chr17 16240683 16240704 -69197776 + L1MC4 LINE L1 7913 7933 -109 2056 157 0 7 chr17 16240704 16241010 -69197470 + AluSx SINE Alu 1 304 -8 316 228 39 47 chr17 16241010 16241115 -69197365 + L1MC4 LINE L1 7933 8038 -4 411 302 86 56 chr17 16241281 16241619 -69196861 - L1ME4a LINE L1 -224 5897 5550 1618 131 4 0 chr17 16241663 16241892 -69196588 + AluSq SINE Alu 68 297 -16 675 269 105 19 chr17 16241964 16242335 -69196145 - L1ME4a LINE L1 -262 5859 5457 23 0 0 0 chr17 16242418 16242441 -69196039 + AT_rich Low_complexity Low_complexity 1 23 0 1389 48 0 4 chr17 16242934 16243144 -69195336 - AluY SINE Alu -11 300 1 207 68 23 45 chr17 16243229 16243273 -69195207 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 462 222 68 12 chr17 16243334 16243496 -69194984 - L1ME4a LINE L1 -1 6120 5950 359 226 97 86 chr17 16243601 16243787 -69194693 - L1M4c LINE L1 -2984 3660 3473 4062 132 20 11 chr17 16244274 16244931 -69193549 + THE1C-int LTR MaLR 918 1580 0 1958 154 52 22 chr17 16244931 16245295 -69193185 + THE1C LTR MaLR 1 375 0 1554 213 0 19 chr17 16245621 16245936 -69192544 - AluJo SINE Alu -1 311 3 290 146 0 0 chr17 16246757 16246798 -69191682 - Alu SINE Alu -254 45 5 2924 212 74 37 chr17 16246812 16248484 -69189996 - L1M4c LINE L1 -4738 1908 14 980 251 84 38 chr17 16248826 16249276 -69189204 - MER20B DNA MER1_type -1 782 312 1708 255 49 19 chr17 16249334 16249864 -69188616 - MER90 LTR ERV1 0 614 69 390 269 42 17 chr17 16249895 16250014 -69188466 - MER20B DNA MER1_type -542 241 120 268 200 80 40 chr17 16250016 16250091 -69188389 - MLT1J2 LTR MaLR -306 144 67 256 237 99 84 chr17 16250125 16250256 -69188224 + MIR SINE MIR 75 207 -55 306 0 0 0 chr17 16250338 16250372 -69188108 + (CA)n Simple_repeat Simple_repeat 2 35 0 2268 113 3 0 chr17 16250446 16250746 -69187734 + AluSp SINE Alu 1 301 -12 1290 243 70 14 chr17 16250881 16251239 -69187241 + MLT1G1 LTR MaLR 1 378 -217 402 219 86 0 chr17 16251281 16251386 -69187094 + MLT1G1 LTR MaLR 465 578 -12 981 277 126 52 chr17 16251563 16251670 -69186810 - MLT1J LTR MaLR 0 511 413 2163 123 7 3 chr17 16251670 16251962 -69186518 + AluSq SINE Alu 2 294 -19 981 277 126 52 chr17 16251962 16252330 -69186150 - MLT1J LTR MaLR -98 413 1 2440 79 0 3 chr17 16254068 16254373 -69184107 + AluY SINE Alu 1 304 -7 301 349 9 28 chr17 16254723 16254832 -69183648 + MIR3 SINE MIR 15 121 -87 839 225 56 11 chr17 16254832 16255010 -69183470 + MER5A DNA MER1_type 4 189 0 2504 37 14 0 chr17 16255085 16255380 -69183100 + AluY SINE Alu 1 299 -12 2271 110 0 0 chr17 16255571 16255870 -69182610 + AluY SINE Alu 1 299 -12 410 156 0 52 chr17 16256521 16256598 -69181882 - L2 LINE L2 -2 3270 3198 1220 184 82 0 chr17 16257053 16257260 -69181220 - MER58A DNA MER1_type 0 224 1 2428 72 3 3 chr17 16258226 16258530 -69179950 - AluY SINE Alu -2 309 6 1156 72 0 0 chr17 16258540 16258679 -69179801 + MER85 DNA T2_type 1 139 0 253 290 172 32 chr17 16259346 16259567 -69178913 + L2 LINE L2 3038 3289 -24 332 280 88 29 chr17 16259575 16259814 -69178666 + HAL1b LINE L1 62 314 -1034 533 248 78 0 chr17 16259869 16260022 -69178458 + HAL1b LINE L1 401 565 -783 379 258 69 73 chr17 16260053 16260286 -69178194 + HAL1b LINE L1 666 897 -451 826 231 152 18 chr17 16260796 16261294 -69177186 + MLT1F LTR MaLR 2 542 0 401 321 179 4 chr17 16263383 16263645 -69174835 - L2 LINE L2 -1 3312 3005 829 185 55 120 chr17 16263665 16263914 -69174566 + Charlie4 DNA MER1_type 1 230 -278 2306 103 7 0 chr17 16263914 16264224 -69174256 - AluSp SINE Alu -1 312 1 829 185 55 120 chr17 16264224 16264266 -69174214 + Charlie4 DNA MER1_type 230 273 -235 * 1338 176 125 27 chr17 16264263 16264473 -69174007 + Charlie4a DNA MER1_type 104 292 -1669 1627 140 110 16 chr17 16264473 16264781 -69173699 - MER44D DNA MER2_type -1 608 2 1338 176 125 27 chr17 16264781 16264939 -69173541 + Charlie4a DNA MER1_type 292 508 0 249 326 90 28 chr17 16265030 16265208 -69173272 - L2 LINE L2 -801 2513 2325 1500 154 0 5 chr17 16265232 16265453 -69173027 + AluSg/x SINE Alu 75 294 -16 271 373 51 28 chr17 16265455 16265710 -69172770 - L2 LINE L2 -978 2336 2076 392 313 130 28 chr17 16265769 16266232 -69172248 - L1M4 LINE L1 -2966 3180 2671 2040 71 67 32 chr17 16266882 16267165 -69171315 - AluY SINE Alu -18 293 1 1603 73 60 18 chr17 16267328 16267546 -69170934 - MER30 DNA MER1_type 0 230 4 2392 81 0 7 chr17 16268159 16268457 -69170023 + AluSp SINE Alu 1 296 -17 194 156 22 0 chr17 16268675 16268720 -69169760 + (TCTA)n Simple_repeat Simple_repeat 1 46 0 1185 198 9 22 chr17 16268774 16268996 -69169484 - MER20 DNA MER1_type 0 219 1 27 0 0 0 chr17 16269404 16269431 -69169049 + AT_rich Low_complexity Low_complexity 1 27 0 2557 71 0 0 chr17 16269988 16270296 -69168184 - AluY SINE Alu -3 308 1 1793 150 14 10 chr17 16270305 16270598 -69167882 - L1MB8 LINE L1 0 6178 5885 207 307 21 118 chr17 16271537 16271676 -69166804 + L2 LINE L2 1516 1616 -1698 2236 113 3 0 chr17 16271676 16271976 -69166504 - AluSx SINE Alu -11 301 1 207 307 21 118 chr17 16271976 16272116 -69166364 + L2 LINE L2 1616 1768 -1546 2036 103 31 7 chr17 16272123 16272413 -69166067 - AluY SINE Alu -14 297 1 339 350 92 25 chr17 16272508 16272834 -69165646 + L2 LINE L2 2628 2975 -339 1948 143 0 26 chr17 16273050 16273358 -69165122 - AluSx SINE Alu -12 300 1 356 236 8 134 chr17 16273759 16273886 -69164594 - MER5B DNA MER1_type -1 177 67 335 272 134 18 chr17 16273943 16274136 -69164344 + L2 LINE L2 2644 2866 -406 1506 208 84 45 chr17 16274136 16274563 -69163917 + MLT1D LTR MaLR 1 444 -61 289 274 8 94 chr17 16274607 16274626 -69163854 + L2 LINE L2 2871 2890 -423 1235 175 156 0 chr17 16274626 16274883 -69163597 - AluJo SINE Alu -13 299 3 289 274 8 94 chr17 16274883 16274980 -69163500 + L2 LINE L2 2890 2977 -336 370 237 36 45 chr17 16275008 16275202 -69163278 - L2 LINE L2 -2 3311 2337 1018 230 35 83 chr17 16275243 16275591 -69162889 - L2 LINE L2 -552 2762 2432 2296 271 115 38 chr17 16275592 16275820 -69162660 - L2 LINE L2 -1154 2160 1951 2273 83 3 20 chr17 16275820 16276122 -69162358 - AluSc SINE Alu -12 297 1 2296 271 115 38 chr17 16276122 16276314 -69162166 - L2 LINE L2 -1363 1951 1775 2306 67 37 0 chr17 16276314 16276613 -69161867 - AluY SINE Alu -1 310 1 2296 271 115 38 chr17 16276613 16277076 -69161404 - L2 LINE L2 -1539 1775 1349 2289 85 0 0 chr17 16277076 16277426 -69161054 + AluSq SINE Alu 1 350 0 2296 271 115 38 chr17 16277426 16277487 -69160993 - L2 LINE L2 -1965 1349 1294 3952 96 35 11 chr17 16277487 16277981 -69160499 + MER41A LTR ERV1 1 511 -43 2223 78 14 14 chr17 16277981 16278276 -69160204 - AluSc SINE Alu -14 295 1 3952 96 35 11 chr17 16278276 16278322 -69160158 + MER41A LTR ERV1 511 554 0 2296 271 115 38 chr17 16278322 16278338 -69160142 - L2 LINE L2 -2020 1294 1122 310 265 20 20 chr17 16278540 16278642 -69159838 + L2 LINE L2 3211 3312 -1 435 181 0 0 chr17 16279362 16279478 -69159002 + (CGGGG)n Simple_repeat Simple_repeat 4 119 0 22 56 0 0 chr17 16279660 16279696 -69158784 + AT_rich Low_complexity Low_complexity 1 36 0 212 242 81 0 chr17 16279924 16279986 -69158494 + MIR SINE MIR 106 172 -90 963 131 7 0 chr17 16280505 16280642 -69157838 - AluSq/x SINE Alu -174 138 1 2479 64 0 13 chr17 16282311 16282623 -69155857 - AluY SINE Alu -3 308 1 2386 70 0 3 chr17 16282749 16283047 -69155433 + AluY SINE Alu 1 297 -14 325 257 47 27 chr17 16283162 16283310 -69155170 - L1MC4a LINE L1 -1925 5883 5733 813 171 0 0 chr17 16283344 16283467 -69155013 + FRAM SINE Alu 38 160 -16 394 337 57 50 chr17 16283983 16284262 -69154218 - L2 LINE L2 -5 3267 2987 2324 132 21 13 chr17 16284821 16285199 -69153281 - L1P5 LINE L1 -424 5732 5352 1427 187 99 0 chr17 16285210 16285494 -69152986 - AluJb SINE Alu 0 312 1 910 122 0 0 chr17 16285501 16285624 -69152856 - FLAM_C SINE Alu -10 133 11 562 126 41 84 chr17 16285625 16285766 -69152714 - L1 LINE L1 -780 5366 5232 289 185 19 0 chr17 16285790 16285844 -69152636 - L2 LINE L2 -68 3245 3191 180 111 0 0 chr17 16285877 16285904 -69152576 + (TGGA)n Simple_repeat Simple_repeat 4 30 0 792 237 58 10 chr17 16286326 16286533 -69151947 + L1ME1 LINE L1 4112 4328 -1818 3118 206 76 44 chr17 16286580 16286823 -69151657 + L1ME1 LINE L1 5073 5307 -859 1760 164 20 10 chr17 16286823 16287116 -69151364 + AluJo SINE Alu 1 296 -16 3118 206 76 44 chr17 16287116 16287917 -69150563 + L1ME1 LINE L1 5307 6151 -15 521 272 58 29 chr17 16287964 16288137 -69150343 + MIR SINE MIR 6 183 -79 301 331 206 26 chr17 16288212 16288791 -69149689 - L2 LINE L2 -24 3248 2561 186 317 195 0 chr17 16291096 16291260 -69147220 + L2 LINE L2 1599 1794 -1520 180 164 18 91 chr17 16292161 16292216 -69146264 + L2 LINE L2 3222 3272 0 256 296 20 51 chr17 16293748 16293846 -69144634 - L2 LINE L2 -221 3051 2957 21 0 0 0 chr17 16294760 16294781 -69143699 + AT_rich Low_complexity Low_complexity 1 21 0 458 232 12 0 chr17 16294795 16294877 -69143603 + 7SLRNA srpRNA srpRNA 2 84 -236 243 0 0 0 chr17 16294906 16294933 -69143547 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 21 36 0 0 chr17 16295031 16295059 -69143421 + AT_rich Low_complexity Low_complexity 1 28 0 21 57 0 0 chr17 16296253 16296288 -69142192 + AT_rich Low_complexity Low_complexity 1 35 0 283 264 240 0 chr17 16296486 16296607 -69141873 + L2 LINE L2 3123 3272 0 510 219 110 55 chr17 16296619 16296783 -69141697 - MIR SINE MIR -28 234 62 401 293 9 17 chr17 16296873 16296989 -69141491 - MIR SINE MIR -69 139 25 346 103 138 0 chr17 16297522 16297580 -69140900 - MER5A DNA MER1_type -120 69 4 21 82 0 0 chr17 16297771 16297820 -69140660 + AT_rich Low_complexity Low_complexity 1 49 0 496 297 135 32 chr17 16298778 16299269 -69139211 + L2 LINE L2 2652 3200 -72 209 184 71 40 chr17 16299535 16299608 -69138872 + MIR SINE MIR 96 146 -62 1027 279 33 42 chr17 16299698 16300156 -69138324 + L1ME4a LINE L1 5486 5939 -182 189 107 0 0 chr17 16300719 16300747 -69137733 + (T)n Simple_repeat Simple_repeat 1 28 0 9145 100 21 25 chr17 16301050 16302355 -69136125 - HSMAR2 DNA Mariner -1 1301 1 234 271 258 19 chr17 16304233 16304388 -69134092 - MIR SINE MIR -63 199 8 571 297 83 18 chr17 16305795 16306024 -69132456 + MIR SINE MIR 2 245 -17 2195 106 7 0 chr17 16307054 16307347 -69131133 - AluSx SINE Alu -17 295 1 252 0 0 0 chr17 16307452 16307480 -69131000 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 198 0 0 0 chr17 16308055 16308077 -69130403 + (T)n Simple_repeat Simple_repeat 1 22 0 2310 89 0 3 chr17 16308580 16308873 -69129607 + AluSg1 SINE Alu 1 292 -17 2164 136 0 0 chr17 16309385 16309686 -69128794 - AluSq SINE Alu -12 301 1 5818 50 1 3 chr17 16360043 16360761 -69077719 - L1PA6 LINE L1 -6 6148 5432 944 206 0 0 chr17 16361909 16362074 -69076406 - FRAM SINE Alu 0 166 2 212 357 57 0 chr17 16362246 16362316 -69076164 - L2 LINE L2 -16 3256 3183 2249 117 3 0 chr17 16362954 16363253 -69075227 + AluSx SINE Alu 1 300 -12 210 37 0 0 chr17 16363254 16363281 -69075199 + (CA)n Simple_repeat Simple_repeat 2 28 0 239 261 14 14 chr17 16363881 16363894 -69074586 + A-rich Low_complexity Low_complexity 3 15 -129 656 205 31 0 chr17 16363894 16364021 -69074459 + FLAM_C SINE Alu 1 131 -2 239 261 14 14 chr17 16364021 16364037 -69074443 + A-rich Low_complexity Low_complexity 15 30 -114 2122 151 0 0 chr17 16364037 16364348 -69074132 + AluSx SINE Alu 1 311 -1 239 261 14 14 chr17 16364348 16364459 -69074021 + A-rich Low_complexity Low_complexity 29 144 0 180 0 0 0 chr17 16365342 16365362 -69073118 + (TTTA)n Simple_repeat Simple_repeat 3 22 0 215 298 32 21 chr17 16365622 16365716 -69072764 - L3 LINE CR1 -170 1407 1313 2150 114 3 3 chr17 16365860 16366157 -69072323 - AluSq SINE Alu -16 297 1 23 78 0 0 chr17 16366393 16366444 -69072036 + AT_rich Low_complexity Low_complexity 1 51 0 2461 82 3 0 chr17 16367014 16367317 -69071163 + AluSp SINE Alu 1 304 -9 2151 90 31 7 chr17 16367723 16368013 -69070467 - AluSx SINE Alu -15 297 1 293 195 24 37 chr17 16368047 16368129 -69070351 + MIR SINE MIR 128 208 -54 361 281 21 10 chr17 16368179 16368275 -69070205 + L2 LINE L2 3213 3309 -4 2027 132 3 3 chr17 16368391 16368680 -69069800 + AluSx SINE Alu 1 289 -23 283 95 48 0 chr17 16368764 16368806 -69069674 + MER57A LTR ERV1 295 338 -65 29 0 0 0 chr17 16368807 16368836 -69069644 + AT_rich Low_complexity Low_complexity 1 29 0 372 22 0 0 chr17 16369099 16369144 -69069336 + (CA)n Simple_repeat Simple_repeat 1 45 0 2225 90 3 22 chr17 16369155 16369467 -69069013 - AluSq SINE Alu -7 306 1 24 32 0 0 chr17 16369509 16369540 -69068940 + AT_rich Low_complexity Low_complexity 1 31 0 218 295 85 62 chr17 16369733 16369862 -69068618 - MIR SINE MIR -19 243 112 21 0 0 0 chr17 16369960 16369981 -69068499 + AT_rich Low_complexity Low_complexity 1 21 0 552 270 95 22 chr17 16369998 16370313 -69068167 + L1MEd LINE L1 1193 1530 -4886 386 273 156 60 chr17 16370314 16370739 -69067741 + L1MEd LINE L1 1381 1986 -4440 3616 188 49 8 chr17 16370904 16371976 -69066504 + L1MB7 LINE L1 4997 6108 -76 1024 108 0 20 chr17 16371983 16372131 -69066349 + AluSc SINE Alu 152 296 -13 289 280 150 39 chr17 16372357 16372564 -69065916 + L1ME3A LINE L1 5426 5655 -511 331 235 206 35 chr17 16372617 16372787 -69065693 + L1ME3A LINE L1 5751 5949 -221 2263 110 0 3 chr17 16374271 16374571 -69063909 + AluSg SINE Alu 1 299 -11 185 219 0 49 chr17 16375003 16375044 -69063436 - MER5B DNA MER1_type -126 52 14 187 200 0 0 chr17 16375012 16375042 -69063438 + MER5A DNA MER1_type 145 174 -15 229 204 0 37 chr17 16375137 16375191 -69063289 - L2 LINE L2 -69 3244 3193 315 305 26 111 chr17 16375196 16375452 -69063028 + L1ME LINE L1 4918 5138 -1008 2342 93 0 0 chr17 16375452 16375752 -69062728 + AluSx SINE Alu 3 302 -10 315 305 26 111 chr17 16375752 16375846 -69062634 + L1ME LINE L1 5138 5238 -908 389 271 102 62 chr17 16375854 16376070 -69062410 + L1ME LINE L1 5283 5522 -599 2395 86 0 0 chr17 16376070 16376373 -69062107 - AluSq SINE Alu -10 303 1 389 271 102 62 chr17 16376373 16376540 -69061940 + L1ME LINE L1 5522 5681 -440 2241 97 24 0 chr17 16376561 16376851 -69061629 + AluSx SINE Alu 1 297 -15 272 148 37 19 chr17 16377081 16377135 -69061345 + MER66A LTR ERV1 282 336 -142 202 238 50 20 chr17 16377138 16377239 -69061241 + A-rich Low_complexity Low_complexity 2 105 0 257 270 159 24 chr17 16377453 16377579 -69060901 + MIR3 SINE MIR 15 157 -51 402 237 128 13 chr17 16377869 16377980 -69060500 - L1MC4 LINE L1 -4 8038 7903 279 0 0 0 chr17 16377980 16378011 -69060469 + (TG)n Simple_repeat Simple_repeat 2 32 0 402 237 128 13 chr17 16378011 16378055 -69060425 - L1MC4 LINE L1 -139 7903 7865 262 270 34 34 chr17 16378317 16378406 -69060074 - L2 LINE L2 0 3313 3225 2378 71 0 26 chr17 16378425 16378734 -69059746 + AluSg SINE Alu 1 301 -9 898 99 123 105 chr17 16378880 16379119 -69059361 + L1MA7 LINE L1 6064 6307 -5 1297 90 6 0 chr17 16380077 16380243 -69058237 + AluSq SINE Alu 132 298 -15 1607 148 87 0 chr17 16380816 16381093 -69057387 - AluSq SINE Alu -12 301 1 1869 224 42 28 chr17 16381212 16381521 -69056959 + L1M4 LINE L1 4072 4375 -1771 2042 116 3 7 chr17 16381521 16381815 -69056665 + AluSp SINE Alu 2 294 -19 1869 224 42 28 chr17 16381815 16382189 -69056291 + L1M4 LINE L1 4375 4765 -1381 24 32 0 0 chr17 16382517 16382548 -69055932 + AT_rich Low_complexity Low_complexity 1 31 0 1169 160 21 21 chr17 16382672 16382909 -69055571 + L1M4 LINE L1 5549 5785 -393 1812 119 13 36 chr17 16382958 16383260 -69055220 + AluSx SINE Alu 1 295 -17 1107 206 33 5 chr17 16383482 16383696 -69054784 + AluJo SINE Alu 2 221 -91 21 0 0 0 chr17 16383703 16383724 -69054756 + AT_rich Low_complexity Low_complexity 1 21 0 1170 252 98 46 chr17 16383725 16383807 -69054673 - HAL1b LINE L1 -636 712 636 2370 109 0 6 chr17 16383807 16384119 -69054361 + AluSp SINE Alu 1 310 -3 1170 252 98 46 chr17 16384119 16384131 -69054349 - HAL1b LINE L1 -712 636 626 2034 124 0 0 chr17 16384131 16384441 -69054039 - AluSx SINE Alu 0 310 1 1170 252 98 46 chr17 16384441 16384955 -69053525 - HAL1b LINE L1 -722 626 70 2095 108 24 0 chr17 16385801 16386088 -69052392 + AluSq SINE Alu 2 295 -18 2337 108 0 0 chr17 16386090 16386427 -69052053 + AluY SINE Alu 1 337 0 21 0 0 31 chr17 16386677 16386695 -69051785 + AT_rich Low_complexity Low_complexity 1 19 -12 1670 177 17 10 chr17 16386695 16386983 -69051497 + AluSx SINE Alu 1 290 -22 21 0 0 31 chr17 16386983 16386996 -69051484 + AT_rich Low_complexity Low_complexity 19 31 0 1625 224 12 29 chr17 16387124 16387606 -69050874 + L1MA9 LINE L1 3271 3744 -2402 750 60 4 2 chr17 16387606 16387856 -69050624 + AluY SINE Alu 1 307 -4 667 199 0 13 chr17 16387856 16388007 -69050473 + L1MA9 LINE L1 3735 3883 -2263 * 3368 188 69 42 chr17 16387997 16388345 -69050135 + L1MA9 LINE L1 5336 5673 -639 1912 164 10 0 chr17 16388345 16388637 -69049843 + AluJb SINE Alu 5 299 -13 3368 188 69 42 chr17 16388637 16388749 -69049731 + L1MA9 LINE L1 5673 5780 -532 2256 125 0 0 chr17 16388749 16389053 -69049427 + AluSx SINE Alu 1 304 -8 453 116 0 0 chr17 16389058 16389127 -69049353 + (TG)n Simple_repeat Simple_repeat 2 70 0 3368 188 69 42 chr17 16389127 16389573 -69048907 + L1MA9 LINE L1 5783 6274 -38 349 204 21 65 chr17 16389592 16389685 -69048795 - MER58 DNA MER1_type -2331 89 1 1473 240 82 26 chr17 16389801 16390315 -69048165 + Charlie2 DNA MER1_type 1882 2445 -417 2385 87 7 0 chr17 16390315 16390624 -69047856 - AluY SINE Alu 0 311 1 1473 240 82 26 chr17 16390624 16390788 -69047692 + Charlie2 DNA MER1_type 2445 2598 -264 5448 178 31 56 chr17 16390796 16393259 -69045221 + L1MA9 LINE L1 3881 6276 -36 2134 148 3 3 chr17 16393274 16393585 -69044895 + AluSx SINE Alu 1 311 -1 1418 137 121 20 chr17 16393591 16393839 -69044641 + AluJb SINE Alu 36 308 -4 196 313 16 16 chr17 16393955 16394019 -69044461 - MIR SINE MIR -96 166 103 506 219 164 27 chr17 16394021 16394167 -69044313 - MER5B DNA MER1_type 0 178 13 21 36 0 0 chr17 16394337 16394365 -69044115 + AT_rich Low_complexity Low_complexity 1 28 0 180 264 56 42 chr17 16394908 16394980 -69043500 - MIR3 SINE MIR -25 183 111 2076 198 40 60 chr17 16395141 16395494 -69042986 + L1MB7 LINE L1 5601 5939 -245 1802 167 30 16 chr17 16395494 16395799 -69042681 + AluJo SINE Alu 1 309 -3 2076 198 40 60 chr17 16395799 16396041 -69042439 + L1MB7 LINE L1 5939 6184 0 2062 130 0 3 chr17 16396202 16396495 -69041985 + AluSg SINE Alu 1 292 -18 2212 114 0 0 chr17 16396615 16396914 -69041566 + AluSx SINE Alu 1 299 -13 481 311 95 49 chr17 16396948 16396984 -69041496 + L1MDa LINE L1 1281 1314 -1587 1962 164 0 0 chr17 16396984 16397283 -69041197 + AluSx SINE Alu 1 299 -13 481 311 95 49 chr17 16397283 16397823 -69040657 + L1MDa LINE L1 1314 2010 -891 1767 199 10 0 chr17 16397823 16398129 -69040351 + AluJo SINE Alu 1 309 -3 481 311 95 49 chr17 16398129 16398211 -69040269 + L1MDa LINE L1 2010 2087 -814 2287 77 10 23 chr17 16398213 16398513 -69039967 - AluY SINE Alu -15 296 1 439 312 85 54 chr17 16398596 16399352 -69039128 + L1MEc LINE L1 37 815 -5581 437 258 76 55 chr17 16399343 16399704 -69038776 + L1MEc LINE L1 1038 1411 -4985 * 1698 172 3 68 chr17 16399704 16400042 -69038438 + 7SLRNA srpRNA srpRNA 1 316 -4 437 258 76 55 chr17 16400042 16400102 -69038378 + L1MEc LINE L1 1411 1468 -4928 890 155 0 7 chr17 16400104 16400246 -69038234 + AluSq/x SINE Alu 1 141 -171 2194 110 0 0 chr17 16400246 16400537 -69037943 + AluSx SINE Alu 1 291 -21 803 239 170 46 chr17 16400612 16401068 -69037412 + L1ME1 LINE L1 5658 6140 -26 2287 101 0 7 chr17 16401107 16401405 -69037075 - AluSq SINE Alu -17 296 1 485 214 65 18 chr17 16401490 16401658 -69036822 + L1M4 LINE L1 3927 4102 -2044 185 365 122 41 chr17 16401665 16401936 -69036544 + L2 LINE L2 1222 1514 -1800 206 289 19 0 chr17 16402760 16402812 -69035668 + L2 LINE L2 3217 3269 -3 2321 110 3 0 chr17 16403062 16403372 -69035108 + AluSx SINE Alu 1 311 -1 327 340 57 64 chr17 16403427 16403724 -69034756 - L1M4 LINE L1 -1343 4803 4509 21 57 0 0 chr17 16403828 16403863 -69034617 + AT_rich Low_complexity Low_complexity 1 35 0 200 191 29 15 chr17 16403977 16404045 -69034435 + (TA)n Simple_repeat Simple_repeat 1 69 0 21 0 0 0 chr17 16404199 16404220 -69034260 + AT_rich Low_complexity Low_complexity 1 21 0 1420 158 15 125 chr17 16404260 16404416 -69034064 + AluJb SINE Alu 1 102 -200 2510 77 0 0 chr17 16404416 16404727 -69033753 + AluY SINE Alu 1 311 0 1097 171 29 0 chr17 16404731 16404906 -69033574 + AluJb SINE Alu 120 299 -13 1866 123 46 3 chr17 16404925 16405210 -69033270 + AluSg SINE Alu 1 297 -13 28 0 0 0 chr17 16405234 16405262 -69033218 + AT_rich Low_complexity Low_complexity 1 28 0 201 296 104 9 chr17 16405410 16405525 -69032955 - MIR3 SINE MIR -42 166 41 261 284 162 45 chr17 16405792 16405948 -69032532 - L1MC4a LINE L1 -1775 6033 5842 2515 69 0 3 chr17 16405948 16406251 -69032229 + AluY SINE Alu 1 302 -9 261 284 162 45 chr17 16406251 16406316 -69032164 - L1MC4a LINE L1 -1966 5842 5786 2522 67 7 0 chr17 16406316 16406613 -69031867 + AluSp SINE Alu 1 299 -14 252 0 0 0 chr17 16407089 16407117 -69031363 + (CA)n Simple_repeat Simple_repeat 2 29 0 2213 111 0 35 chr17 16408078 16408394 -69030086 + AluSc SINE Alu 1 305 -4 1922 157 3 0 chr17 16409189 16409476 -69029004 + AluSx SINE Alu 1 288 -24 2290 104 0 16 chr17 16409680 16409817 -69028663 + AluSx SINE Alu 1 139 -173 2345 98 3 0 chr17 16409817 16410124 -69028356 + AluSg SINE Alu 1 308 -2 2290 104 0 16 chr17 16410124 16410295 -69028185 + AluSx SINE Alu 139 304 -8 288 0 0 0 chr17 16410913 16410945 -69027535 + (CA)n Simple_repeat Simple_repeat 2 33 0 607 267 110 48 chr17 16410972 16411536 -69026944 + L2 LINE L2 2588 3204 -109 286 205 80 152 chr17 16411731 16412145 -69026335 + L1MC/D LINE L1 4549 4932 -1214 280 228 8 94 chr17 16412113 16412240 -69026240 + L1P LINE L1 4901 5016 -1130 * 406 185 0 37 chr17 16412638 16412719 -69025761 - MIR SINE MIR -105 157 80 2179 121 3 0 chr17 16412811 16413118 -69025362 + AluSp SINE Alu 1 308 -5 563 319 74 30 chr17 16413121 16413213 -69025267 + L1MC/D LINE L1 5265 5351 -2457 2328 109 6 0 chr17 16413213 16413524 -69024956 + AluSq SINE Alu 1 313 0 2443 93 3 0 chr17 16413528 16413838 -69024642 + AluSp SINE Alu 1 311 -2 563 319 74 30 chr17 16413838 16414147 -69024333 + L1MC/D LINE L1 5353 5689 -2119 2297 111 0 0 chr17 16414260 16414557 -69023923 - AluSx SINE Alu -14 298 2 2558 65 7 0 chr17 16415332 16415641 -69022839 + AluY SINE Alu 1 311 0 2450 68 0 58 chr17 16415904 16416230 -69022250 - AluSc SINE Alu -2 307 1 1533 181 52 7 chr17 16416443 16416730 -69021750 + AluJo SINE Alu 3 302 -10 754 148 7 49 chr17 16417313 16417455 -69021025 + FLAM_C SINE Alu 2 137 -6 2137 128 10 0 chr17 16417542 16417832 -69020648 + AluSx SINE Alu 1 293 -19 21 0 0 0 chr17 16417943 16417964 -69020516 + AT_rich Low_complexity Low_complexity 1 21 0 2212 97 3 3 chr17 16417974 16418262 -69020218 + AluSp SINE Alu 1 288 -25 21 36 0 0 chr17 16418268 16418296 -69020184 + AT_rich Low_complexity Low_complexity 1 28 0 2443 76 0 7 chr17 16418602 16418903 -69019577 - AluY SINE Alu -12 299 1 195 305 84 42 chr17 16418995 16419090 -69019390 + MIR3 SINE MIR 67 165 -43 1433 170 101 17 chr17 16419117 16419405 -69019075 - AluJb SINE Alu 0 312 1 2217 91 37 7 chr17 16419868 16420164 -69018316 + AluSg SINE Alu 1 305 -5 1734 147 56 3 chr17 16420662 16420947 -69017533 + AluJb SINE Alu 1 300 -12 2403 72 10 3 chr17 16421083 16421389 -69017091 + AluY SINE Alu 1 308 -3 392 227 57 43 chr17 16421543 16421684 -69016796 - MIR SINE MIR -43 219 77 202 159 0 45 chr17 16423353 16423397 -69015083 + (CCG)n Simple_repeat Simple_repeat 2 43 0 2004 115 10 0 chr17 16424091 16424386 -69014094 + AluSx SINE Alu 1 298 -14 2398 56 28 0 chr17 16424387 16424674 -69013806 + AluSg SINE Alu 1 295 -15 401 206 56 9 chr17 16425975 16426082 -69012398 + L1MB7 LINE L1 6071 6182 -2 386 294 37 0 chr17 16426200 16426309 -69012171 - L2 LINE L2 -1 3312 3200 2280 103 7 3 chr17 16426550 16426852 -69011628 - AluSx SINE Alu -9 303 1 1970 85 68 48 chr17 16426938 16427232 -69011248 - AluY SINE Alu -11 300 1 1956 151 17 0 chr17 16427436 16427735 -69010745 - AluSx SINE Alu -8 304 1 2318 84 0 0 chr17 16427940 16428225 -69010255 + AluSc SINE Alu 1 285 -24 2262 101 7 3 chr17 16428353 16428660 -69009820 - AluSx SINE Alu -4 308 1 1041 124 0 0 chr17 16428660 16428805 -69009675 - AluSq/x SINE Alu -168 145 1 604 174 9 9 chr17 16429223 16429323 -69009157 - AluJo/FRAM SINE Alu -75 237 135 2001 132 27 10 chr17 16429323 16429489 -69008991 - AluSx SINE Alu -11 301 126 2242 96 20 3 chr17 16429489 16429791 -69008689 - AluSg SINE Alu -3 307 1 2001 132 27 10 chr17 16429791 16429920 -69008560 - AluSx SINE Alu -186 126 1 417 248 54 16 chr17 16430316 16430445 -69008035 - MIR SINE MIR -70 192 59 2128 144 0 0 chr17 16430602 16430914 -69007566 + AluSx SINE Alu 1 312 0 181 319 14 0 chr17 16431099 16431168 -69007312 - L2 LINE L2 -557 2757 2688 2234 110 0 0 chr17 16431169 16431459 -69007021 + AluSg SINE Alu 1 290 -20 935 126 0 15 chr17 16431470 16431605 -69006875 + FLAM_C SINE Alu 1 133 0 2107 104 0 28 chr17 16431807 16432095 -69006385 + AluSc SINE Alu 1 280 -29 1750 127 4 4 chr17 16432235 16432479 -69006001 - AluSx SINE Alu -68 244 1 2173 106 0 0 chr17 16432545 16432828 -69005652 - AluY SINE Alu -28 283 1 317 232 46 53 chr17 16432833 16432984 -69005496 - L1M4 LINE L1 -1538 4608 4459 242 218 152 30 chr17 16433071 16433236 -69005244 - L1MEd LINE L1 -5235 884 700 1609 80 0 14 chr17 16433252 16433464 -69005016 - AluY SINE Alu -3 308 100 269 59 0 0 chr17 16433466 16433500 -69004980 - AluY SINE Alu -274 34 1 193 28 0 56 chr17 16433500 16433536 -69004944 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 286 323 75 8 chr17 16433579 16433712 -69004768 - L1MEd LINE L1 -5501 618 477 239 217 0 0 chr17 16433714 16433760 -69004720 - MLT1G1 LTR MaLR -16 526 481 1042 183 59 9 chr17 16433777 16433996 -69004484 + AluJo SINE Alu 7 236 -76 845 265 217 12 chr17 16434089 16434492 -69003988 - MLT1G1 LTR MaLR -124 466 1 337 291 47 12 chr17 16434772 16434944 -69003536 - L1MEd LINE L1 -5936 183 6 2349 84 3 19 chr17 16434971 16435281 -69003199 - AluSx SINE Alu -5 307 3 2455 90 7 0 chr17 16435441 16435751 -69002729 - AluSp SINE Alu -1 312 1 3996 160 44 46 chr17 16435881 16435923 -69002557 - L1MB4 LINE L1 -6 6174 6133 2283 95 0 20 chr17 16435923 16436229 -69002251 - AluSq SINE Alu -12 301 2 262 24 71 0 chr17 16436230 16436272 -69002208 + T-rich Low_complexity Low_complexity 2 46 0 2452 38 0 14 chr17 16436272 16436559 -69001921 - AluY SINE Alu -27 284 2 3996 160 44 46 chr17 16436559 16436861 -69001619 - L1MB4 LINE L1 -46 6134 5833 1821 168 0 20 chr17 16436861 16437158 -69001322 + AluJo SINE Alu 1 291 -21 3996 160 44 46 chr17 16437158 16437197 -69001283 - L1MB4 LINE L1 -347 5833 5795 240 111 0 0 chr17 16437197 16437233 -69001247 + (TA)n Simple_repeat Simple_repeat 1 36 0 3996 160 44 46 chr17 16437233 16437708 -69000772 - L1MB4 LINE L1 -385 5795 5313 2470 83 0 3 chr17 16437731 16438033 -69000447 - AluSc SINE Alu -8 301 1 622 307 58 0 chr17 16438090 16438331 -69000149 + LTR33A LTR ERVL 262 516 -7 1005 151 0 42 chr17 16438495 16438661 -68999819 - AluSc SINE Alu -16 293 135 27 49 0 0 chr17 16438734 16438775 -68999705 + AT_rich Low_complexity Low_complexity 1 41 0 632 149 52 67 chr17 16438947 16439081 -68999399 - FLAM_C SINE Alu 0 133 2 1868 170 0 22 chr17 16439095 16439412 -68999068 - AluJo SINE Alu -2 310 1 23 33 0 0 chr17 16439459 16439489 -68998991 + AT_rich Low_complexity Low_complexity 1 30 0 289 199 185 7 chr17 16439706 16439852 -68998628 - Charlie7 DNA MER1_type -1 2611 2440 2317 114 0 0 chr17 16439868 16440174 -68998306 + AluSq SINE Alu 1 306 -7 2103 102 28 0 chr17 16440711 16440996 -68997484 + AluSg SINE Alu 2 294 -16 287 238 8 16 chr17 16441001 16441092 -68997388 - MIR SINE MIR -62 146 63 1801 124 84 0 chr17 16442060 16442333 -68996147 + AluSg SINE Alu 1 296 -14 2171 111 0 3 chr17 16442354 16442642 -68995838 + AluSx SINE Alu 1 287 -25 543 251 75 139 chr17 16442776 16443305 -68995175 - L1MC5 LINE L1 -51 7910 7470 2184 116 0 28 chr17 16443305 16443625 -68994855 - AluSx SINE Alu -1 311 1 543 251 75 139 chr17 16443625 16444068 -68994412 - L1MC5 LINE L1 -491 7470 7000 758 244 17 74 chr17 16444127 16444444 -68994036 - L1MC5 LINE L1 -998 7001 6717 2267 104 0 3 chr17 16444444 16444741 -68993739 - AluSx SINE Alu -16 296 1 758 244 17 74 chr17 16444741 16444804 -68993676 - L1MC5 LINE L1 -1282 6717 6652 971 179 27 0 chr17 16444804 16444974 -68993506 - AluJo SINE Alu -4 308 131 2389 101 0 0 chr17 16444974 16445280 -68993200 - AluSx SINE Alu -6 306 1 971 179 27 0 chr17 16445280 16445293 -68993187 - AluJo SINE Alu -181 131 120 1928 166 7 3 chr17 16445391 16445698 -68992782 + AluJb SINE Alu 1 308 -4 2485 76 0 0 chr17 16445788 16446089 -68992391 + AluSg SINE Alu 1 301 -9 1547 88 5 0 chr17 16446298 16446502 -68991978 - AluSx SINE Alu -2 310 106 2291 100 0 3 chr17 16446502 16446801 -68991679 + AluSg SINE Alu 2 299 -11 843 114 0 0 chr17 16446801 16446915 -68991565 - AluSx SINE Alu -198 114 1 734 193 0 22 chr17 16446925 16447060 -68991420 + FLAM_A SINE Alu 1 132 -1 2422 84 3 3 chr17 16447075 16447385 -68991095 + AluSg SINE Alu 1 310 0 1286 165 121 40 chr17 16447664 16447838 -68990642 - AluJo SINE Alu -18 294 89 2508 128 43 19 chr17 16447838 16448253 -68990227 + MSTA LTR MaLR 1 425 -3 1286 165 121 40 chr17 16448253 16448350 -68990130 - AluJo SINE Alu -223 89 1 1670 171 19 13 chr17 16448362 16448672 -68989808 - AluJo SINE Alu 0 312 1 2423 73 3 19 chr17 16448699 16449012 -68989468 + AluSp SINE Alu 1 308 -5 1940 104 79 0 chr17 16449179 16449457 -68989023 + AluSp SINE Alu 1 300 -13 594 271 111 0 chr17 16449629 16449916 -68988564 - L1ME4a LINE L1 -194 5927 5603 1475 203 33 13 chr17 16449916 16450221 -68988259 - AluJo SINE Alu -1 311 1 594 271 111 0 chr17 16450221 16450239 -68988241 - L1ME4a LINE L1 -518 5603 5588 239 28 0 0 chr17 16450524 16450560 -68987920 - AluSx SINE Alu 0 308 273 1479 136 47 5 chr17 16450567 16450780 -68987700 - AluSx SINE Alu -90 222 1 2202 121 3 0 chr17 16450924 16451222 -68987258 - AluSx SINE Alu -13 299 1 312 280 56 9 chr17 16451416 16451523 -68986957 + MIR SINE MIR 28 139 -123 4933 71 48 5 chr17 16451645 16452307 -68986173 - LTR8 LTR ERV1 0 691 1 297 214 0 0 chr17 16452473 16452529 -68985951 - Tigger5 DNA MER2_type -6 2317 2262 1990 159 0 10 chr17 16452540 16452848 -68985632 - AluJb SINE Alu -5 307 3 2160 128 7 0 chr17 16452859 16453163 -68985317 - AluSq SINE Alu -7 306 1 1045 118 0 0 chr17 16453164 16453299 -68985181 - AluSq/x SINE Alu -177 135 1 370 231 0 0 chr17 16453302 16453380 -68985100 + Tigger5 DNA MER2_type 2243 2320 -3 356 48 0 0 chr17 16453395 16453437 -68985043 - AluSc SINE Alu -17 282 241 1086 94 0 7 chr17 16453437 16453575 -68984905 - AluSc SINE Alu -172 137 1 579 195 0 0 chr17 16453575 16453693 -68984787 + (CATATA)n Simple_repeat Simple_repeat 3 120 0 2204 86 0 40 chr17 16453693 16453995 -68984485 - AluY SINE Alu -21 290 1 2383 67 21 0 chr17 16454110 16454394 -68984086 + AluSc SINE Alu 1 290 -19 1370 193 55 55 chr17 16454440 16454545 -68983935 - MLT1B LTR MaLR -4 386 282 2877 6 0 13 chr17 16454545 16454861 -68983619 - AluYb8 SINE Alu -6 312 1 1370 193 55 55 chr17 16454861 16455138 -68983342 - MLT1B LTR MaLR -107 283 4 1552 185 229 0 chr17 16455141 16455482 -68982998 - MLT1B-int LTR MaLR 0 1735 1317 359 228 65 11 chr17 16455458 16455550 -68982930 - MLT1B-int LTR MaLR -953 782 686 * 3216 194 35 21 chr17 16455647 16455754 -68982726 - MLT1B-int LTR MaLR -655 716 612 2424 92 0 0 chr17 16455754 16456058 -68982422 - AluSg SINE Alu -6 304 1 3216 194 35 21 chr17 16456058 16456656 -68981824 - MLT1B-int LTR MaLR -759 612 1 1089 196 36 46 chr17 16456656 16456937 -68981543 - MLT1A2 LTR MaLR 0 374 97 811 163 16 0 chr17 16456939 16457068 -68981412 + Tigger7 DNA MER2_type 1 131 -602 1891 120 0 7 chr17 16457068 16457344 -68981136 + AluSx SINE Alu 1 274 -38 1991 189 176 22 chr17 16457344 16457357 -68981123 - MLT2B3 LTR ERVL -22 532 522 207 0 0 0 chr17 16457357 16457380 -68981100 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 1991 189 176 22 chr17 16457380 16457816 -68980664 - MLT2B3 LTR ERVL -32 522 14 1854 145 0 10 chr17 16457825 16458122 -68980358 - AluSq SINE Alu -19 294 1 964 164 0 7 chr17 16458145 16458297 -68980183 + Tigger7 DNA MER2_type 2337 2487 0 406 188 115 31 chr17 16458297 16458393 -68980087 - MLT1A2 LTR MaLR -286 104 1 592 237 160 12 chr17 16458587 16458756 -68979724 - MIR SINE MIR -58 204 11 395 313 41 27 chr17 16458800 16458947 -68979533 - MIR SINE MIR -70 192 44 1897 153 10 0 chr17 16459016 16459311 -68979169 + AluJb SINE Alu 1 298 -14 199 246 87 72 chr17 16459581 16459650 -68978830 - L2 LINE L2 -10 3303 3234 2291 88 0 0 chr17 16459939 16460244 -68978236 - AluSc SINE Alu -4 305 1 44 63 0 0 chr17 16460418 16460497 -68977983 + AT_rich Low_complexity Low_complexity 1 79 0 1226 163 26 115 chr17 16460808 16461157 -68977323 + AluYb8 SINE Alu 1 318 0 636 163 23 0 chr17 16461269 16461398 -68977082 + L1MA7 LINE L1 6154 6285 -6 1522 185 17 14 chr17 16461534 16461831 -68976649 + AluJo SINE Alu 1 298 -14 213 279 67 117 chr17 16461890 16462069 -68976411 + L2 LINE L2 2893 3062 -210 2332 93 3 0 chr17 16462129 16462439 -68976041 - AluSp SINE Alu -1 312 2 183 114 0 0 chr17 16462450 16462485 -68975995 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2255 77 7 0 chr17 16462487 16462774 -68975706 - AluY SINE Alu -22 289 1 350 230 3 24 chr17 16463996 16464106 -68974374 + L1MC/D LINE L1 5664 5768 -353 1867 99 3 51 chr17 16464197 16464522 -68973958 - AluSg SINE Alu 0 311 1 1474 165 53 4 chr17 16464540 16464855 -68973625 - AluJb SINE Alu 0 333 6 533 144 41 41 chr17 16464884 16464981 -68973499 + AluJb SINE Alu 194 290 -22 2296 93 0 10 chr17 16465007 16465319 -68973161 + AluSq SINE Alu 1 309 -4 2039 101 7 0 chr17 16465657 16465934 -68972546 + AluSq SINE Alu 3 281 -32 768 52 0 0 chr17 16465934 16466031 -68972449 + (GA)n Simple_repeat Simple_repeat 2 98 0 2197 102 0 0 chr17 16466047 16466350 -68972130 - AluSg SINE Alu -7 303 1 1976 121 11 0 chr17 16466353 16466673 -68971807 - AluSp SINE Alu 0 323 1 668 106 97 0 chr17 16467182 16467295 -68971185 + L1MD3 LINE L1 4832 4955 -1191 598 143 0 36 chr17 16467296 16467408 -68971072 + FLAM_C SINE Alu 36 143 0 626 188 72 0 chr17 16467408 16467546 -68970934 + L1MD3 LINE L1 4943 5090 -1056 4164 184 81 64 chr17 16467546 16468710 -68969770 + MER52A LTR ERV1 1 1226 -529 2189 107 0 3 chr17 16468710 16469009 -68969471 + AluSg SINE Alu 1 298 -12 4164 184 81 64 chr17 16469009 16469109 -68969371 + MER52A LTR ERV1 1226 1323 -432 735 177 0 8 chr17 16469114 16469238 -68969242 + MER52A LTR ERV1 1633 1755 0 927 196 10 0 chr17 16469238 16469437 -68969043 + L1MD3 LINE L1 5087 5287 -859 366 202 9 132 chr17 16469437 16469559 -68968921 + AluJ/FLAM SINE Alu 1 93 -209 1160 147 0 21 chr17 16469575 16469766 -68968714 - AluJb SINE Alu -115 197 11 22 0 0 0 chr17 16469783 16469805 -68968675 + AT_rich Low_complexity Low_complexity 1 22 0 2031 133 0 0 chr17 16469813 16470106 -68968374 + AluSx SINE Alu 1 293 -19 1407 196 26 191 chr17 16470107 16470421 -68968059 + L1MD3 LINE L1 5306 5544 -2451 688 181 24 16 chr17 16470421 16470548 -68967932 + FLAM_A SINE Alu 12 139 -3 2429 167 41 24 chr17 16470548 16471058 -68967422 + L1MB7 LINE L1 5604 6122 -62 1515 169 53 3 chr17 16471059 16471343 -68967137 - AluJo SINE Alu -14 298 1 2106 110 7 3 chr17 16471392 16471693 -68966787 - AluSc SINE Alu -7 302 1 2186 79 0 64 chr17 16471706 16471883 -68966597 - AluSq SINE Alu -5 308 160 2042 106 25 0 chr17 16471883 16472167 -68966313 - AluSx SINE Alu -8 304 14 2186 79 0 64 chr17 16472167 16472318 -68966162 - AluSq SINE Alu -153 160 1 1723 72 83 51 chr17 16472472 16472799 -68965681 - AluSq SINE Alu 0 336 1 2139 96 3 3 chr17 16473333 16473626 -68964854 + AluSg SINE Alu 1 293 -17 1772 111 93 0 chr17 16474005 16474284 -68964196 + AluSx SINE Alu 1 305 -7 2241 65 0 10 chr17 16474471 16474764 -68963716 - AluY SINE Alu -16 295 6 2132 135 85 50 chr17 16474886 16475323 -68963157 - Tigger2 DNA MER2_type 0 2718 2267 478 72 29 14 chr17 16475305 16475374 -68963106 + MER8 DNA MER2_type 170 239 0 * 911 188 53 0 chr17 16475427 16475597 -68962883 + FRAM SINE Alu 1 176 0 327 288 40 107 chr17 16475834 16476133 -68962347 - L2 LINE L2 -68 3204 2926 212 0 36 0 chr17 16476306 16476334 -68962146 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2090 109 0 3 chr17 16476336 16476621 -68961859 - AluSq SINE Alu -28 285 2 2039 119 0 10 chr17 16476622 16476934 -68961546 - AluSc SINE Alu 0 309 1 538 224 98 7 chr17 16476940 16477083 -68961397 - MIR SINE MIR -26 236 81 2095 103 7 10 chr17 16477238 16477539 -68960941 + AluSx SINE Alu 1 300 -12 380 305 46 40 chr17 16477539 16477690 -68960790 - MER5B DNA MER1_type -26 152 1 2201 87 0 7 chr17 16477877 16478176 -68960304 + AluSq SINE Alu 1 297 -16 210 100 80 0 chr17 16478297 16478347 -68960133 + (TTAA)n Simple_repeat Simple_repeat 1 54 0 2234 86 20 0 chr17 16478487 16478789 -68959691 + AluSx SINE Alu 1 308 -4 339 299 97 19 chr17 16479117 16479271 -68959209 + MIR3 SINE MIR 40 205 -3 585 101 54 88 chr17 16479311 16479409 -68959071 - MER53 DNA DNA 0 189 96 2246 99 0 0 chr17 16479409 16479702 -68958778 - AluSg SINE Alu -17 293 1 585 101 54 88 chr17 16479702 16479751 -68958729 - MER53 DNA DNA -93 96 47 180 0 0 0 chr17 16479751 16479771 -68958709 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 541 195 31 39 chr17 16479774 16479902 -68958578 - FLAM_C SINE Alu -16 127 1 489 271 93 74 chr17 16480320 16480741 -68957739 + L2 LINE L2 1685 2113 -1201 483 320 174 12 chr17 16480914 16481161 -68957319 - L2 LINE L2 -1 3271 2985 186 398 68 31 chr17 16481206 16481621 -68956859 - L2 LINE L2 -454 2860 2431 216 97 0 0 chr17 16482248 16482279 -68956201 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 3135 120 30 52 chr17 16482280 16482313 -68956167 - MER41B LTR ERV1 -88 547 515 2252 87 0 0 chr17 16482313 16482611 -68955869 + AluSq SINE Alu 1 298 -15 3135 120 30 52 chr17 16482611 16482622 -68955858 - MER41B LTR ERV1 -120 515 505 2169 114 0 0 chr17 16482622 16482930 -68955550 + AluSx SINE Alu 1 308 -4 3135 120 30 52 chr17 16482930 16483443 -68955037 - MER41B LTR ERV1 -130 505 1 13023 93 21 18 chr17 16483443 16483614 -68954866 - MER41B-int LTR ERV1 0 5946 5777 1998 144 0 0 chr17 16483614 16483913 -68954567 + AluSx SINE Alu 1 299 -13 13023 93 21 18 chr17 16483913 16484323 -68954157 - MER41B-int LTR ERV1 -169 5777 5370 1991 121 0 14 chr17 16484323 16484632 -68953848 + AluSq SINE Alu 1 305 0 13023 93 21 18 chr17 16484632 16485928 -68952552 - MER41B-int LTR ERV1 -576 5370 2430 1493 132 0 0 chr17 16485928 16486141 -68952339 - AluSx SINE Alu -12 298 86 632 119 0 0 chr17 16486175 16486259 -68952221 - AluSx SINE Alu -226 86 3 2780 73 35 12 chr17 16486261 16486683 -68951797 - MER41A-int LTR ERV1 -2227 3719 3288 1653 119 65 18 chr17 16486669 16486946 -68951534 - MER41A-int LTR ERV1 -3025 2921 2632 * 532 165 35 0 chr17 16486945 16487030 -68951450 - MER41A-int LTR ERV1 -5858 88 1 * 1004 105 26 7 chr17 16487030 16487182 -68951298 - MER41A LTR ERV1 0 554 400 1054 148 76 52 chr17 16488355 16488565 -68949915 - L1MC1 LINE L1 -1 6332 6118 2054 111 0 0 chr17 16488567 16488875 -68949605 - AluSg1 SINE Alu 0 308 1 215 250 0 0 chr17 16490458 16490502 -68947978 + MIR3 SINE MIR 156 199 -9 1674 131 27 44 chr17 16490758 16490879 -68947601 + AluJb SINE Alu 1 123 -189 2118 118 0 0 chr17 16490879 16491175 -68947305 - AluSx SINE Alu -16 296 1 1674 131 27 44 chr17 16491175 16491351 -68947129 + AluJb SINE Alu 123 293 -19 739 203 0 0 chr17 16491411 16491544 -68946936 + FLAM_C SINE Alu 1 133 0 2287 91 0 3 chr17 16491842 16492149 -68946331 - AluSq SINE Alu -7 306 1 411 186 2 16 chr17 16492168 16492251 -68946229 - AluS SINE Alu -236 67 1 * 3923 83 2 63 chr17 16492251 16492834 -68945646 + LTR8 LTR ERV1 145 691 0 663 169 8 32 chr17 16492868 16492992 -68945488 - FLAM_C SINE Alu -21 122 2 1932 93 58 0 chr17 16493177 16493455 -68945025 + AluSg SINE Alu 1 294 -16 313 354 23 23 chr17 16494804 16494934 -68943546 + L2 LINE L2 3141 3270 -2 470 228 158 38 chr17 16495793 16495951 -68942529 - L1ME LINE L1 -452 5669 5493 195 42 0 0 chr17 16496050 16496074 -68942406 + (TTCC)n Simple_repeat Simple_repeat 1 24 0 2113 112 7 0 chr17 16496074 16496377 -68942103 - AluSq SINE Alu -8 305 1 2316 90 3 3 chr17 16496399 16496711 -68941769 - AluSp SINE Alu -1 312 1 2201 100 3 0 chr17 16497648 16497948 -68940532 - AluSp SINE Alu -12 301 1 1704 97 43 8 chr17 16497952 16498209 -68940271 - AluSx SINE Alu 0 312 47 206 136 23 0 chr17 16498226 16498270 -68940210 + C-rich Low_complexity Low_complexity 1 45 0 1396 182 52 21 chr17 16498270 16498556 -68939924 - AluJb SINE Alu -17 295 1 186 43 0 0 chr17 16498565 16498588 -68939892 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1561 149 11 8 chr17 16498590 16498852 -68939628 - AluJb SINE Alu -49 263 1 2164 122 3 0 chr17 16499098 16499409 -68939071 + AluSx SINE Alu 1 312 0 2206 99 3 0 chr17 16499456 16499759 -68938721 + AluSx SINE Alu 1 304 -8 504 165 0 0 chr17 16499762 16499841 -68938639 + FLAM SINE Alu 45 123 -20 1885 116 4 0 chr17 16499905 16500173 -68938307 - AluSx SINE Alu -10 302 34 217 336 57 16 chr17 16500237 16500359 -68938121 + L2 LINE L2 1662 1788 -1526 483 243 62 11 chr17 16500384 16500561 -68937919 + L1ME LINE L1 5615 5800 -321 2259 66 0 13 chr17 16501115 16501416 -68937064 + AluY SINE Alu 1 297 -14 222 274 201 62 chr17 16502006 16502185 -68936295 - MIR3 SINE MIR -2 206 3 428 268 51 29 chr17 16502527 16502665 -68935815 + LTR33A LTR ERVL 40 180 -343 655 222 54 45 chr17 16502721 16502942 -68935538 + LTR33A LTR ERVL 298 520 -3 2105 87 4 0 chr17 16503014 16503291 -68935189 + AluSx SINE Alu 21 298 -14 1018 156 6 0 chr17 16503369 16503529 -68934951 + AluJb SINE Alu 133 293 -19 2048 119 10 0 chr17 16503534 16503837 -68934643 + AluSq SINE Alu 1 306 -7 417 213 49 55 chr17 16503882 16504046 -68934434 - Charlie7 DNA MER1_type -1 2611 2449 302 284 25 0 chr17 16504053 16504134 -68934346 - Charlie7 DNA MER1_type -2521 91 9 2298 101 0 0 chr17 16504202 16504509 -68933971 + AluSg SINE Alu 1 307 -3 2193 50 4 14 chr17 16504612 16504891 -68933589 - AluY SINE Alu -35 276 1 1855 132 138 0 chr17 16505711 16506007 -68932473 + MER1B DNA MER1_type 1 337 0 199 308 39 0 chr17 16506073 16506125 -68932355 + L2 LINE L2 2717 2770 -544 2217 125 3 10 chr17 16506618 16506931 -68931549 + AluSx SINE Alu 1 311 -1 1050 118 0 0 chr17 16506931 16507067 -68931413 + AluSg/x SINE Alu 134 269 -43 2032 97 40 4 chr17 16507068 16507346 -68931134 + AluSx SINE Alu 25 312 0 2228 128 3 0 chr17 16508271 16508575 -68929905 + AluSx SINE Alu 1 305 -7 276 222 74 12 chr17 16508579 16508660 -68929820 - MIR SINE MIR -120 142 57 351 106 0 30 chr17 16509009 16509075 -68929405 - FAM SINE Alu 0 179 116 1068 171 21 36 chr17 16509075 16509132 -68929348 - AluJo SINE Alu -122 190 134 2405 96 3 0 chr17 16509132 16509434 -68929046 - AluSg SINE Alu -7 303 1 2475 79 7 0 chr17 16509436 16509741 -68928739 - AluY SINE Alu -4 307 1 1068 171 21 36 chr17 16509741 16509873 -68928607 - AluJo SINE Alu -179 133 1 2263 113 3 0 chr17 16510465 16510767 -68927713 - AluSc SINE Alu -4 305 3 1276 118 0 0 chr17 16511407 16511576 -68926904 - AluSg/x SINE Alu -8 302 134 2644 62 0 0 chr17 16511578 16511886 -68926594 - AluY SINE Alu -3 308 1 838 141 0 44 chr17 16512352 16512487 -68925993 + FLAM_C SINE Alu 5 133 0 396 266 28 46 chr17 16512608 16512717 -68925763 - L2 LINE L2 -5 3308 3202 927 168 39 39 chr17 16512731 16512877 -68925603 - MER20 DNA MER1_type -16 203 55 1592 150 49 65 chr17 16512877 16513184 -68925296 + AluJo SINE Alu 1 302 -10 927 168 39 39 chr17 16513184 16513240 -68925240 - MER20 DNA MER1_type -163 56 1 949 162 0 42 chr17 16513656 16513823 -68924657 - AluJo/FRAM SINE Alu -19 293 134 2180 107 3 7 chr17 16513823 16514121 -68924359 - AluSg SINE Alu -13 297 1 200 269 17 131 chr17 16514143 16514318 -68924162 - MIR SINE MIR -62 146 43 2406 85 3 3 chr17 16514395 16514701 -68923779 - AluSp SINE Alu -7 306 1 231 146 21 62 chr17 16515475 16515523 -68922957 + MIR SINE MIR 217 262 0 1587 172 47 37 chr17 16515557 16515853 -68922627 + AluJo SINE Alu 1 299 -13 186 43 0 0 chr17 16515882 16515905 -68922575 + (TAAAA)n Simple_repeat Simple_repeat 2 24 0 2312 102 0 0 chr17 16515925 16516218 -68922262 + AluSg1 SINE Alu 1 293 -16 446 220 28 46 chr17 16516320 16516429 -68922051 - L2 LINE L2 -5 3308 3202 890 184 0 7 chr17 16516481 16516622 -68921858 + AluJo SINE Alu 19 158 -154 1626 168 47 37 chr17 16516665 16516963 -68921517 - AluJo SINE Alu -11 301 1 714 173 0 0 chr17 16517045 16517155 -68921325 + AluJo SINE Alu 164 273 -39 2140 129 3 10 chr17 16517353 16517664 -68920816 + AluSg SINE Alu 1 309 -1 2281 125 3 0 chr17 16517669 16517980 -68920500 + AluSx SINE Alu 1 312 0 342 0 0 0 chr17 16518159 16518197 -68920283 + (TG)n Simple_repeat Simple_repeat 2 39 0 188 371 48 57 chr17 16518317 16518414 -68920066 - MIR SINE MIR -69 139 42 2056 89 8 0 chr17 16518414 16518671 -68919809 - AluSq SINE Alu -18 295 37 188 371 48 57 chr17 16518671 16518697 -68919783 - MIR SINE MIR -166 42 17 288 329 63 14 chr17 16518718 16518861 -68919619 + MIR SINE MIR 5 154 -108 210 276 0 48 chr17 16519071 16519176 -68919304 + T-rich Low_complexity Low_complexity 2 101 0 315 221 92 53 chr17 16519187 16519318 -68919162 - MIR SINE MIR -64 198 63 11198 36 3 84 chr17 16519331 16520830 -68917650 - SVA Other Other 0 1386 9 2197 76 65 3 chr17 16523557 16523868 -68914612 - AluSg SINE Alu 0 329 1 420 264 52 21 chr17 16525162 16525334 -68913146 - MIR SINE MIR -59 203 32 22 35 0 0 chr17 16525966 16525995 -68912485 + AT_rich Low_complexity Low_complexity 1 29 0 615 243 91 61 chr17 16525997 16526138 -68912342 - L1ME4a LINE L1 -3 6118 5983 2317 102 3 3 chr17 16526138 16526443 -68912037 - AluSq SINE Alu -8 305 1 615 243 91 61 chr17 16526443 16526523 -68911957 - L1ME4a LINE L1 -138 5983 5907 2249 117 3 0 chr17 16526523 16526822 -68911658 + AluSg SINE Alu 1 300 -10 615 243 91 61 chr17 16526822 16526844 -68911636 - L1ME4a LINE L1 -214 5907 5887 1686 150 107 0 chr17 16526844 16527124 -68911356 + AluJo SINE Alu 1 310 -2 615 243 91 61 chr17 16527124 16527273 -68911207 - L1ME4a LINE L1 -234 5887 5712 2270 94 3 3 chr17 16527345 16527644 -68910836 + AluSx SINE Alu 1 299 -13 517 206 0 0 chr17 16527877 16527979 -68910501 + FLAM_A SINE Alu 1 102 -40 850 150 8 21 chr17 16528015 16528256 -68910224 + GA-rich Low_complexity Low_complexity 1 237 0 634 189 6 23 chr17 16528270 16528445 -68910035 + GA-rich Low_complexity Low_complexity 1 172 0 2249 123 0 19 chr17 16528490 16528807 -68909673 - AluSx SINE Alu -1 311 1 2374 113 0 0 chr17 16528808 16529110 -68909370 - AluSx SINE Alu -10 302 1 2221 116 3 0 chr17 16529110 16529412 -68909068 - AluSp SINE Alu -10 303 1 206 274 145 0 chr17 16529432 16529494 -68908986 - L2 LINE L2 -11 3261 3191 234 91 0 0 chr17 16529579 16529612 -68908868 + (TTCC)n Simple_repeat Simple_repeat 4 36 0 2390 78 6 34 chr17 16529633 16529955 -68908525 - AluSp SINE Alu 0 313 1 2245 119 0 3 chr17 16529957 16530267 -68908213 - AluSx SINE Alu -3 309 1 317 311 0 0 chr17 16530339 16530471 -68908009 - L1M4 LINE L1 -3129 3017 2886 2554 195 106 12 chr17 16530497 16531065 -68907415 - MER82 DNA MER2_type -2 651 31 2225 111 3 3 chr17 16531108 16531406 -68907074 - AluSq SINE Alu -15 298 1 21 36 0 0 chr17 16531418 16531446 -68907034 + AT_rich Low_complexity Low_complexity 1 28 0 2170 114 0 19 chr17 16531482 16531789 -68906691 - AluSg SINE Alu -9 301 1 2056 123 0 27 chr17 16531823 16532137 -68906343 - AluSq SINE Alu 0 306 1 2067 84 15 96 chr17 16532196 16532530 -68905950 - AluSx SINE Alu -4 308 2 2404 71 40 0 chr17 16532936 16533232 -68905248 + AluY SINE Alu 1 308 -3 368 282 124 64 chr17 16533235 16533437 -68905043 + MIR SINE MIR 28 241 -21 231 219 0 135 chr17 16533985 16534081 -68904399 + MIR SINE MIR 144 226 -36 573 222 169 11 chr17 16534579 16534768 -68903712 + MIR SINE MIR 13 231 -31 421 299 171 19 chr17 16535080 16535233 -68903247 + L1ME LINE L1 5501 5696 -425 2045 133 17 0 chr17 16535233 16535527 -68902953 + AluSx SINE Alu 1 299 -13 421 299 171 19 chr17 16535527 16535584 -68902896 + L1ME LINE L1 5696 5743 -378 222 222 0 0 chr17 16535676 16535730 -68902750 + (TA)n Simple_repeat Simple_repeat 2 55 0 2255 88 3 0 chr17 16535876 16536161 -68902319 + AluSc SINE Alu 3 288 -21 1980 169 7 0 chr17 16536170 16536472 -68902008 + AluJb SINE Alu 1 304 -8 306 0 0 0 chr17 16536472 16536506 -68901974 + (TA)n Simple_repeat Simple_repeat 2 35 0 1172 119 18 0 chr17 16536640 16536808 -68901672 + AluSg/x SINE Alu 140 310 0 324 337 78 48 chr17 16537052 16537218 -68901262 - MER91A DNA MER1_type -23 173 3 500 317 160 13 chr17 16537788 16538088 -68900392 + HAL1 LINE L1 1113 1456 -1051 2366 107 0 0 chr17 16538099 16538398 -68900082 + AluSx SINE Alu 1 299 -13 2496 68 7 0 chr17 16538401 16538696 -68899784 + AluSc SINE Alu 1 297 -12 324 328 89 39 chr17 16538822 16539081 -68899399 + L1 LINE L1 2859 3130 -3016 * 463 289 117 63 chr17 16539051 16539401 -68899079 + L1M4 LINE L1 2248 2616 -3530 1021 160 35 25 chr17 16539465 16539630 -68898850 - AluJo SINE Alu 0 302 140 2133 107 17 14 chr17 16539630 16539938 -68898542 - AluSx SINE Alu 0 312 1 1021 160 35 25 chr17 16539938 16539951 -68898529 - AluJo SINE Alu -162 140 129 198 0 0 0 chr17 16539951 16539973 -68898507 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 1021 160 35 25 chr17 16539973 16540013 -68898467 - AluJo SINE Alu -173 129 81 765 274 188 50 chr17 16540059 16540595 -68897885 + L1M4 LINE L1 2745 3354 -2792 780 135 326 6 chr17 16540602 16540780 -68897700 + AluSg/x SINE Alu 65 299 -10 2557 177 51 26 chr17 16540780 16541094 -68897386 + L1MB5 LINE L1 5496 5830 -344 2339 108 0 7 chr17 16541094 16541400 -68897080 + AluSg SINE Alu 1 304 -6 2557 177 51 26 chr17 16541400 16541617 -68896863 + L1MB5 LINE L1 5830 6040 -134 24 32 0 0 chr17 16541617 16541648 -68896832 + AT_rich Low_complexity Low_complexity 1 31 0 1160 186 21 0 chr17 16541648 16541836 -68896644 - AluJo SINE Alu -26 286 95 335 149 60 0 chr17 16541865 16541932 -68896548 + L1MB7 LINE L1 6095 6165 -19 2553 47 7 0 chr17 16542016 16542313 -68896167 + AluY SINE Alu 2 300 -11 335 271 111 49 chr17 16542448 16542592 -68895888 + L1M4 LINE L1 4458 4610 -1536 22 70 0 0 chr17 16542596 16542639 -68895841 + AT_rich Low_complexity Low_complexity 1 43 0 378 320 29 23 chr17 16542654 16542826 -68895654 + L1M4 LINE L1 4570 4742 -1404 2370 86 3 0 chr17 16542826 16543118 -68895362 + AluSg SINE Alu 1 293 -17 266 330 12 53 chr17 16543255 16543439 -68895041 + L1MC4a LINE L1 4504 4669 -1477 2118 93 7 4 chr17 16543439 16543718 -68894762 + AluSx SINE Alu 1 280 -32 266 330 12 53 chr17 16543718 16543872 -68894608 + L1MC4a LINE L1 4669 4828 -1318 2192 104 0 4 chr17 16544048 16544361 -68894119 + AluSg SINE Alu 1 312 0 1602 163 3 74 chr17 16544424 16544589 -68893891 - AluJo SINE Alu -10 302 127 2276 95 3 38 chr17 16544589 16544906 -68893574 - AluSp SINE Alu -1 312 7 1602 163 3 74 chr17 16544906 16544917 -68893563 - AluJo SINE Alu -185 127 117 2442 73 0 3 chr17 16544917 16545217 -68893263 - AluY SINE Alu -12 299 1 1602 163 3 74 chr17 16545217 16545364 -68893116 - AluJo SINE Alu -195 117 1 2473 91 0 0 chr17 16545398 16545707 -68892773 + AluSg SINE Alu 1 309 -1 491 256 118 31 chr17 16545805 16545834 -68892646 + L1MC4a LINE L1 5573 5598 -2210 2281 99 10 16 chr17 16545834 16546147 -68892333 + AluSq SINE Alu 1 311 -2 491 256 118 31 chr17 16546147 16546406 -68892074 + L1MC4a LINE L1 5598 5886 -1922 1136 175 101 9 chr17 16546406 16546623 -68891857 + AluJo SINE Alu 3 239 -73 1371 149 193 28 chr17 16546642 16546802 -68891678 - AluSg SINE Alu -10 290 158 299 65 22 0 chr17 16546802 16546848 -68891632 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 2061 126 7 7 chr17 16546848 16547133 -68891347 - AluSx SINE Alu -27 285 1 1371 149 193 28 chr17 16547133 16547220 -68891260 - AluSg SINE Alu -141 159 1 32 0 0 0 chr17 16547224 16547256 -68891224 + AT_rich Low_complexity Low_complexity 1 32 0 754 178 7 22 chr17 16547399 16547534 -68890946 - AluJo SINE Alu -178 134 2 2356 113 0 0 chr17 16547547 16547857 -68890623 - AluSx SINE Alu -1 311 2 26 0 0 0 chr17 16547857 16547883 -68890597 + AT_rich Low_complexity Low_complexity 1 26 0 914 171 49 6 chr17 16548300 16548464 -68890016 - FRAM SINE Alu -6 170 1 228 35 0 0 chr17 16548535 16548564 -68889916 + (ATTG)n Simple_repeat Simple_repeat 4 32 0 2242 83 11 0 chr17 16548564 16548842 -68889638 - AluSq SINE Alu -32 281 1 827 131 8 0 chr17 16548873 16549003 -68889477 + L1MB3 LINE L1 6008 6138 -45 1465 181 54 7 chr17 16549003 16549279 -68889201 + AluJo SINE Alu 1 289 -23 2464 95 0 0 chr17 16549489 16549794 -68888686 - AluSx SINE Alu -7 305 1 2277 114 0 3 chr17 16549794 16550092 -68888388 - AluSx SINE Alu -15 297 1 877 171 95 0 chr17 16550151 16550309 -68888171 - AluJb SINE Alu -2 310 138 21 0 0 0 chr17 16550416 16550437 -68888043 + AT_rich Low_complexity Low_complexity 1 21 0 1886 105 8 4 chr17 16551205 16551462 -68887018 - AluSp SINE Alu -13 300 43 805 138 9 0 chr17 16551903 16552019 -68886461 - FLAM_C SINE Alu -26 117 1 2138 103 0 7 chr17 16552625 16552943 -68885537 - AluSg SINE Alu 0 316 1 1431 54 0 43 chr17 16552986 16553161 -68885319 + AluY SINE Alu 134 302 -9 1599 155 8 8 chr17 16553161 16553406 -68885074 + AluJb SINE Alu 1 245 -67 1003 279 125 24 chr17 16553841 16554341 -68884139 + L1MC4a LINE L1 5322 5883 -1925 2323 93 7 0 chr17 16554341 16554630 -68883850 + AluSx SINE Alu 1 291 -21 1003 279 125 24 chr17 16554630 16554673 -68883807 + L1MC4a LINE L1 5883 5920 -1888 1831 175 3 3 chr17 16554714 16555023 -68883457 - AluJb SINE Alu 0 309 1 254 89 133 0 chr17 16555403 16555448 -68883032 - MER66B LTR ERV1 -141 345 295 312 248 53 44 chr17 16555458 16555571 -68882909 + L1ME4a LINE L1 5634 5747 -374 345 180 30 30 chr17 16555861 16555961 -68882519 + L1ME4a LINE L1 5963 6062 -59 2314 121 3 0 chr17 16556022 16556329 -68882151 - AluSx SINE Alu -4 308 1 349 275 117 0 chr17 16557627 16557747 -68880733 - L1MC5 LINE L1 -62 7899 7766 2062 122 7 0 chr17 16558217 16558512 -68879968 - AluSg SINE Alu -13 297 1 2320 82 7 0 chr17 16558810 16559103 -68879377 - AluSp SINE Alu -18 295 1 227 325 0 0 chr17 16559412 16559495 -68878985 - L1ME4a LINE L1 -76 6045 5963 22 0 0 0 chr17 16560871 16560893 -68877587 + GC_rich Low_complexity Low_complexity 1 22 0 200 135 0 58 chr17 16561027 16561079 -68877401 + (CGG)n Simple_repeat Simple_repeat 1 49 0 354 274 121 88 chr17 16561239 16561578 -68876902 + L1M2 LINE L1 776 1125 -5724 2271 80 3 7 chr17 16561977 16562276 -68876204 - AluSq SINE Alu -15 298 1 842 40 64 8 chr17 16562284 16562409 -68876071 - AluSc SINE Alu -1 308 177 1341 147 72 44 chr17 16562487 16562639 -68875841 - AluJo SINE Alu -7 305 159 183 42 0 0 chr17 16562639 16562663 -68875817 + (C)n Simple_repeat Simple_repeat 1 24 0 1341 147 72 44 chr17 16562663 16562803 -68875677 - AluJo SINE Alu -153 159 5 501 211 280 0 chr17 16562837 16563012 -68875468 - L1ME3 LINE L1 -14 6148 5925 884 168 17 89 chr17 16563029 16563208 -68875272 + FRAM SINE Alu 1 166 0 372 209 22 137 chr17 16563224 16563290 -68875190 + L1ME3 LINE L1 5975 6018 -144 1958 121 46 4 chr17 16563290 16563571 -68874909 + AluSg SINE Alu 1 293 -17 372 209 22 137 chr17 16563571 16563643 -68874837 + L1ME3 LINE L1 6018 6097 -65 2334 100 10 0 chr17 16563689 16563999 -68874481 + AluSp SINE Alu 1 313 0 2039 79 79 0 chr17 16564127 16564404 -68874076 + AluSq SINE Alu 1 299 -14 2146 107 0 26 chr17 16564406 16564714 -68873766 + AluSx SINE Alu 1 300 -12 877 225 29 12 chr17 16564943 16565183 -68873297 + L1M4 LINE L1 4615 4858 -1288 2255 92 3 0 chr17 16565183 16565495 -68872985 - AluSp SINE Alu 0 314 2 1922 133 9 43 chr17 16565505 16565828 -68872652 - AluSx SINE Alu 0 312 1 2408 89 7 0 chr17 16565882 16566186 -68872294 - AluSq SINE Alu -7 306 1 206 206 191 15 chr17 16566586 16566654 -68871826 + L2 LINE L2 3229 3308 -5 1918 140 0 14 chr17 16566737 16567055 -68871425 - AluSx SINE Alu 0 314 1 1826 107 8 0 chr17 16567096 16567338 -68871142 - AluSq SINE Alu -17 296 53 1815 157 14 3 chr17 16567414 16567701 -68870779 + AluJo SINE Alu 1 290 -22 306 256 154 17 chr17 16567812 16567929 -68870551 - L2 LINE L2 -1 3312 3180 267 250 54 27 chr17 16568251 16568363 -68870117 - L1M4 LINE L1 -1487 4659 4545 1132 249 99 26 chr17 16568363 16568789 -68869691 - MLT1L LTR MaLR -6 609 153 975 160 58 11 chr17 16569076 16569264 -68869216 + MER46A DNA MER2_type 40 236 0 695 195 92 0 chr17 16570127 16570272 -68868208 + MIR SINE MIR 33 189 -64 2246 204 99 7 chr17 16570437 16571045 -68867435 - L1M4 LINE L1 -2912 3234 2571 2312 108 0 0 chr17 16571046 16571351 -68867129 - AluSx SINE Alu -7 305 1 1074 90 0 0 chr17 16571354 16571487 -68866993 - AluSq/x SINE Alu -180 133 1 1421 73 0 0 chr17 16571787 16571964 -68866516 + AluY SINE Alu 127 303 -8 2322 95 0 3 chr17 16571971 16572275 -68866205 + AluSq SINE Alu 1 303 -10 1934 167 0 3 chr17 16572990 16573301 -68865179 - AluJb SINE Alu -2 310 1 2209 112 0 3 chr17 16573545 16573840 -68864640 + AluSx SINE Alu 2 295 -17 325 222 11 11 chr17 16573861 16573951 -68864529 - L1ME3A LINE L1 -230 5940 5851 648 265 169 48 chr17 16574157 16574338 -68864142 - L1ME3A LINE L1 -355 5807 5649 1650 143 0 16 chr17 16574338 16574590 -68863890 + AluSq SINE Alu 1 248 -65 648 265 169 48 chr17 16574590 16575030 -68863450 - L1ME3A LINE L1 -513 5649 5100 1478 173 10 70 chr17 16575180 16575480 -68863000 - AluJo SINE Alu -30 282 1 554 302 108 50 chr17 16575502 16575599 -68862881 - L2 LINE L2 -1 3312 3222 2307 88 7 13 chr17 16575599 16575906 -68862574 + AluSg SINE Alu 1 305 -5 554 302 108 50 chr17 16575906 16576225 -68862255 - L2 LINE L2 -91 3222 2872 296 292 77 31 chr17 16576236 16576366 -68862114 - L1MEd LINE L1 -5328 791 656 383 259 170 0 chr17 16576714 16576849 -68861631 - L1MEd LINE L1 -5919 200 43 239 214 169 34 chr17 16577178 16577267 -68861213 - L1ME3A LINE L1 -2305 3841 3741 2949 105 28 5 chr17 16577878 16578306 -68860174 + MER75 DNA T2_type 72 509 -5 2482 63 0 31 chr17 16578781 16579098 -68859382 - AluY SINE Alu -4 307 1 194 357 206 0 chr17 16582740 16582866 -68855614 + MER5B DNA MER1_type 7 158 -20 252 0 0 0 chr17 16583312 16583340 -68855140 + (A)n Simple_repeat Simple_repeat 1 28 0 25 0 0 0 chr17 16583664 16583689 -68854791 + AT_rich Low_complexity Low_complexity 1 25 0 3069 114 33 2 chr17 16584447 16584868 -68853612 - Tigger2a DNA MER2_type 0 434 1 232 266 216 10 chr17 16585169 16585298 -68853182 + MIR SINE MIR 2 155 -53 2324 68 38 0 chr17 16587557 16587849 -68850631 + AluSp SINE Alu 1 303 -10 916 132 0 132 chr17 16588301 16588490 -68849990 - AluSg/x SINE Alu -14 298 135 1543 159 24 64 chr17 16588810 16589105 -68849375 + AluJb SINE Alu 7 289 -23 12503 121 91 5 chr17 16589604 16590021 -68848459 - Tigger1 DNA MER2_type -223 2195 1815 1930 150 6 29 chr17 16590021 16590335 -68848145 - AluJb SINE Alu -5 307 1 12503 121 91 5 chr17 16590335 16591939 -68846541 - Tigger1 DNA MER2_type -603 1815 1 261 157 112 56 chr17 16592623 16592712 -68845768 - HAL1b LINE L1 -256 1092 999 1825 143 4 7 chr17 16592929 16593208 -68845272 - AluJb SINE Alu -11 301 24 2316 81 0 0 chr17 16593279 16593562 -68844918 - AluSc SINE Alu -26 283 1 2209 89 7 10 chr17 16594290 16594583 -68843897 - AluSx SINE Alu -20 292 1 193 237 0 0 chr17 16594842 16594880 -68843600 + L2 LINE L2 3267 3304 -9 334 70 0 0 chr17 16595142 16595193 -68843287 - Alu SINE Alu -8 294 253 662 170 14 71 chr17 16595242 16595383 -68843097 + FLAM_A SINE Alu 1 133 0 2252 112 0 13 chr17 16595895 16596208 -68842272 - AluSq SINE Alu -4 309 1 186 71 0 0 chr17 16596217 16596245 -68842235 + (TTAA)n Simple_repeat Simple_repeat 3 30 0 2247 82 7 0 chr17 16596245 16596527 -68841953 - AluY SINE Alu -27 284 1 184 111 0 0 chr17 16596986 16597013 -68841467 + MER5B DNA MER1_type 21 47 -131 941 318 76 12 chr17 16597229 16597729 -68840751 - L2 LINE L2 -894 2420 1889 2302 104 3 0 chr17 16598381 16598690 -68839790 + AluSx SINE Alu 1 310 -2 857 246 79 4 chr17 16599749 16599977 -68838503 + MIR SINE MIR 18 262 0 2048 141 10 7 chr17 16599992 16600297 -68838183 - AluSx SINE Alu -4 308 3 1624 164 22 7 chr17 16600312 16600586 -68837894 - AluJo SINE Alu -14 298 21 209 138 69 52 chr17 16600833 16600891 -68837589 + L3 LINE CR1 939 997 -580 412 287 170 65 chr17 16600979 16601362 -68837118 + L3 LINE CR1 1135 1557 -20 190 297 9 63 chr17 16602548 16602659 -68835821 + MIR SINE MIR 20 124 -138 280 195 98 65 chr17 16602915 16603038 -68835442 + MIR SINE MIR 130 256 -6 21 36 0 0 chr17 16603133 16603161 -68835319 + AT_rich Low_complexity Low_complexity 1 28 0 2034 96 41 24 chr17 16604079 16604370 -68834110 - AluSx SINE Alu -16 296 1 1408 133 44 121 chr17 16604390 16604705 -68833775 - AluJo SINE Alu -17 295 5 2128 138 0 0 chr17 16604719 16605016 -68833464 - AluSx SINE Alu -15 297 1 273 276 76 21 chr17 16605158 16605303 -68833177 - HAL1 LINE L1 -117 2390 2238 1781 168 3 19 chr17 16605317 16605626 -68832854 - AluJo SINE Alu -2 310 7 307 228 114 81 chr17 16605698 16605821 -68832659 - HAL1b LINE L1 -473 875 749 10785 163 57 16 chr17 16605843 16606127 -68832353 + L1PA13 LINE L1 2825 3096 -3050 2071 100 7 4 chr17 16606127 16606436 -68832044 + AluSp SINE Alu 5 314 0 10785 163 57 16 chr17 16606436 16606505 -68831975 + L1PA13 LINE L1 3096 3161 -2985 2289 67 0 51 chr17 16606505 16606817 -68831663 - AluY SINE Alu -15 296 1 10785 163 57 16 chr17 16606817 16608884 -68829596 + L1PA13 LINE L1 3161 5331 -815 742 190 0 15 chr17 16608884 16609021 -68829459 + AluJb SINE Alu 139 273 -39 5673 81 7 24 chr17 16609021 16609141 -68829339 + L1PA13 LINE L1 5316 5437 -726 2073 147 0 7 chr17 16609141 16609441 -68829039 + AluSx SINE Alu 1 298 -14 5673 81 7 24 chr17 16609441 16610183 -68828297 + L1PA13 LINE L1 5437 6159 -4 544 241 0 38 chr17 16610394 16610552 -68827928 + L1MC5 LINE L1 7756 7907 -54 2083 98 25 35 chr17 16610794 16611109 -68827371 - AluSx SINE Alu 0 312 1 330 206 0 0 chr17 16611341 16611414 -68827066 + (TA)n Simple_repeat Simple_repeat 1 73 0 906 160 0 0 chr17 16611502 16611627 -68826853 - FLAM_C SINE Alu -18 125 1 2422 87 3 10 chr17 16613258 16613570 -68824910 + AluSp SINE Alu 1 310 -3 30 0 0 0 chr17 16617655 16617685 -68820795 + AT_rich Low_complexity Low_complexity 1 30 0 1604 182 3 17 chr17 16617685 16617976 -68820504 - AluJo SINE Alu -25 287 1 275 203 0 14 chr17 16617978 16618047 -68820433 - L1ME LINE L1 -454 5667 5600 229 182 0 0 chr17 16618602 16618646 -68819834 + CT-rich Low_complexity Low_complexity 3 46 0 2123 130 0 9 chr17 16618811 16619126 -68819354 + AluSx SINE Alu 1 312 0 221 121 0 0 chr17 16619888 16619921 -68818559 - L2 LINE L2 -2 3311 3279 936 233 18 18 chr17 16620647 16620870 -68817610 - MER58A DNA MER1_type 0 224 2 573 209 37 0 chr17 16622198 16622332 -68816148 + L1ME3A LINE L1 6032 6170 0 2195 104 7 13 chr17 16623209 16623508 -68814972 - AluSc SINE Alu -12 297 1 623 115 0 26 chr17 16623517 16623630 -68814850 - L1MB3 LINE L1 0 6183 6074 793 290 45 9 chr17 16624093 16624314 -68814166 - MIR SINE MIR -3 259 31 21 0 0 0 chr17 16624597 16624618 -68813862 + AT_rich Low_complexity Low_complexity 1 21 0 1902 105 4 0 chr17 16625241 16625489 -68812991 + AluSp SINE Alu 1 249 -64 1721 143 15 8 chr17 16625492 16625758 -68812722 + AluJb SINE Alu 1 268 -44 490 122 138 49 chr17 16626161 16626284 -68812196 + L1MB3 LINE L1 6048 6181 -2 23 0 0 0 chr17 16628146 16628169 -68810311 + AT_rich Low_complexity Low_complexity 1 23 0 519 350 72 45 chr17 16628218 16628661 -68809819 - L2 LINE L2 -1 3271 2817 2351 64 0 32 chr17 16629359 16629670 -68808810 - AluY SINE Alu -10 301 1 279 331 83 6 chr17 16629789 16629946 -68808534 - MIR SINE MIR -5 257 89 6819 99 45 26 chr17 16630532 16631601 -68806879 + HSMAR1 DNA Mariner 1 1089 -198 1970 142 6 22 chr17 16631608 16631925 -68806555 + AluSx SINE Alu 1 312 0 835 171 0 11 chr17 16631939 16632114 -68806366 + G-rich Low_complexity Low_complexity 5 177 0 200 154 77 0 chr17 16632114 16632153 -68806327 + A-rich Low_complexity Low_complexity 4 45 0 1257 100 42 0 chr17 16632153 16632343 -68806137 + HSMAR1 DNA Mariner 1090 1287 0 2461 72 0 0 chr17 16633074 16633367 -68805113 - AluSg SINE Alu -17 293 1 320 229 21 42 chr17 16633494 16633590 -68804890 - MER5A DNA MER1_type -83 106 13 264 313 28 56 chr17 16633590 16633734 -68804746 + MER5A DNA MER1_type 27 166 -23 * 745 252 6 0 chr17 16633609 16633768 -68804712 - MER5A DNA MER1_type -29 160 1 24 53 0 0 chr17 16634821 16634859 -68803621 + AT_rich Low_complexity Low_complexity 1 38 0 22 0 0 0 chr17 16635311 16635333 -68803147 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr17 16635395 16635418 -68803062 + AT_rich Low_complexity Low_complexity 1 23 0 330 182 40 50 chr17 16635568 16635667 -68802813 + L1ME2 LINE L1 2 99 -6443 820 127 0 0 chr17 16635689 16635807 -68802673 - AluSg/x SINE Alu 0 309 192 4466 205 70 42 chr17 16635807 16636926 -68801554 + L1ME2 LINE L1 83 1241 -5301 1462 211 32 23 chr17 16636926 16637234 -68801246 + AluJo SINE Alu 1 311 -1 4466 205 70 42 chr17 16637234 16637340 -68801140 + L1ME2 LINE L1 1241 1343 -5199 416 296 38 13 chr17 16637355 16637514 -68800966 + L1ME2 LINE L1 4455 4617 -2027 1748 87 0 13 chr17 16637519 16637748 -68800732 + AluSc SINE Alu 76 301 -8 613 141 0 0 chr17 16637748 16637834 -68800646 + AluJo/FRAM SINE Alu 163 248 -64 400 220 165 11 chr17 16637876 16638058 -68800422 + L1ME2 LINE L1 4897 5106 -1538 207 100 0 0 chr17 16638420 16638450 -68800030 + (GAAAA)n Simple_repeat Simple_repeat 3 32 0 2575 210 109 18 chr17 16638948 16640317 -68798163 + L1ME2 LINE L1 5121 6607 -55 350 340 77 6 chr17 16642922 16643078 -68795402 - L1M4 LINE L1 -1824 4322 4156 392 201 227 46 chr17 16643147 16643341 -68795139 - MIR SINE MIR -33 229 1 488 256 29 17 chr17 16645796 16645937 -68792543 - MIR SINE MIR -64 144 45 1653 137 30 19 chr17 16646709 16646972 -68791508 + AluSx SINE Alu 9 274 -38 441 0 0 0 chr17 16647141 16647190 -68791290 + (TA)n Simple_repeat Simple_repeat 1 49 0 2159 128 0 16 chr17 16647190 16647496 -68790984 - AluSx SINE Alu -10 302 2 600 274 102 30 chr17 16647497 16647800 -68790680 + L2 LINE L2 2184 2508 -806 1587 153 33 43 chr17 16648397 16648698 -68789782 - AluJo SINE Alu -14 298 1 5336 79 24 60 chr17 16649039 16649929 -68788551 + SVA Other Other 9 866 -520 5700 46 45 25 chr17 16650192 16650928 -68787552 + SVA Other Other 635 1385 -1 1119 152 52 0 chr17 16651452 16651663 -68786817 + L1MB2 LINE L1 5707 5928 -255 526 241 53 23 chr17 16651724 16651857 -68786623 + MER21B LTR ERV1 60 196 -667 370 150 39 127 chr17 16651881 16651991 -68786489 - FLAM_A SINE Alu -27 106 21 2107 204 51 62 chr17 16651992 16652625 -68785855 + MER21B LTR ERV1 184 809 -54 749 199 51 51 chr17 16652642 16652878 -68785602 + L1MB2 LINE L1 5929 6164 -7 567 188 30 0 chr17 16653310 16653411 -68785069 + U6 snRNA snRNA 1 104 -3 372 357 13 9 chr17 16653580 16653835 -68784645 + Charlie8 DNA MER1_type 38 1390 -1027 21 0 0 0 chr17 16654826 16654847 -68783633 + AT_rich Low_complexity Low_complexity 1 21 0 2167 115 7 0 chr17 16654966 16655261 -68783219 + AluSx SINE Alu 2 298 -14 406 184 31 0 chr17 16656779 16656877 -68781603 - MER33 DNA MER1_type 0 324 224 1279 95 0 22 chr17 16656881 16657060 -68781420 - AluSp SINE Alu -9 304 130 810 155 38 66 chr17 16657070 16657205 -68781275 - MER33 DNA MER1_type -2373 212 84 2162 112 0 0 chr17 16657205 16657500 -68780980 - AluSx SINE Alu -17 295 1 810 155 38 66 chr17 16657500 16657577 -68780903 - MER33 DNA MER1_type -2501 84 6 591 315 162 43 chr17 16657691 16658340 -68780140 + L2 LINE L2 2292 3100 -213 1806 121 61 0 chr17 16658340 16658604 -68779876 + AluSp SINE Alu 1 280 -33 591 315 162 43 chr17 16658604 16658838 -68779642 + L2 LINE L2 3100 3305 -8 24 32 0 0 chr17 16658883 16658914 -68779566 + AT_rich Low_complexity Low_complexity 1 31 0 1037 279 118 23 chr17 16658942 16659095 -68779385 - L2 LINE L2 0 3313 3176 1717 170 7 17 chr17 16659095 16659395 -68779085 + AluJo SINE Alu 1 297 -15 1037 279 118 23 chr17 16659395 16659840 -68778640 - L2 LINE L2 -137 3176 2662 1147 178 0 33 chr17 16659842 16660056 -68778424 + AluJo SINE Alu 106 312 0 431 279 32 25 chr17 16660158 16660316 -68778164 - L2 LINE L2 -900 2414 2256 279 0 0 0 chr17 16660327 16660358 -68778122 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2169 106 0 0 chr17 16660424 16660736 -68777744 + AluSq SINE Alu 1 312 0 270 0 0 0 chr17 16661461 16661491 -68776989 + (TA)n Simple_repeat Simple_repeat 2 31 0 2512 48 7 10 chr17 16661491 16661801 -68776679 - AluY SINE Alu -2 309 1 1451 207 35 29 chr17 16661833 16662209 -68776271 + MLT1B LTR MaLR 1 378 -12 221 196 0 0 chr17 16663196 16663242 -68775238 + L2 LINE L2 3268 3313 0 23 68 0 0 chr17 16663839 16663883 -68774597 + AT_rich Low_complexity Low_complexity 1 44 0 436 266 82 88 chr17 16663909 16664263 -68774217 - L1ME4a LINE L1 -79 6042 5691 2299 102 0 0 chr17 16664343 16664638 -68773842 - AluSg1 SINE Alu -14 295 1 1680 180 14 3 chr17 16664693 16664988 -68773492 + AluJb SINE Alu 15 312 0 341 221 0 0 chr17 16665576 16665653 -68772827 - FLAM_A SINE Alu 0 133 57 2144 112 0 31 chr17 16665926 16666248 -68772232 + AluSx SINE Alu 1 312 0 512 243 29 86 chr17 16666248 16666458 -68772022 + MLT2D LTR ERVL 217 414 0 2328 100 0 0 chr17 16666465 16666775 -68771705 - AluY SINE Alu -1 310 1 4364 190 49 65 chr17 16667041 16667103 -68771377 - Charlie1a DNA MER1_type -1312 1449 1388 2263 92 17 0 chr17 16667103 16667395 -68771085 - AluSc SINE Alu -12 297 1 4364 190 49 65 chr17 16667395 16667519 -68770961 - Charlie1a DNA MER1_type -1373 1388 1264 2269 89 0 17 chr17 16667519 16667821 -68770659 - AluY SINE Alu -14 297 1 4364 190 49 65 chr17 16667821 16668217 -68770263 - Charlie1a DNA MER1_type -1497 1264 863 2360 108 0 0 chr17 16668217 16668523 -68769957 + AluSx SINE Alu 1 306 -6 4364 190 49 65 chr17 16668523 16668593 -68769887 - Charlie1a DNA MER1_type -1898 863 793 2284 101 32 61 chr17 16668593 16668968 -68769512 - THE1B LTR MaLR 0 364 1 11609 95 14 0 chr17 16668968 16670526 -68767954 - THE1B-int LTR MaLR 0 1580 2 2248 121 30 28 chr17 16670527 16670890 -68767590 - THE1B LTR MaLR 0 364 1 4364 190 49 65 chr17 16670890 16671658 -68766822 - Charlie1a DNA MER1_type -1966 795 45 180 0 0 0 chr17 16672121 16672141 -68766339 + (A)n Simple_repeat Simple_repeat 1 20 0 2129 116 3 0 chr17 16672147 16672431 -68766049 + AluSx SINE Alu 1 285 -27 218 311 14 0 chr17 16673185 16673259 -68765221 + (TA)n Simple_repeat Simple_repeat 2 76 0 296 252 0 28 chr17 16673486 16673574 -68764906 - MIR SINE MIR -115 93 9 225 0 0 0 chr17 16674592 16674617 -68763863 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 299 327 93 23 chr17 16674748 16675048 -68763432 + L2 LINE L2 2550 2870 -444 444 304 75 60 chr17 16675127 16675393 -68763087 + L1ME1 LINE L1 5550 5819 -302 218 297 40 54 chr17 16676241 16676315 -68762165 + MIR3 SINE MIR 105 177 -31 936 234 63 13 chr17 16676438 16676677 -68761803 + MIR SINE MIR 12 262 0 334 319 143 49 chr17 16677038 16677232 -68761248 + L2 LINE L2 1883 2057 -1257 1700 174 41 10 chr17 16677232 16677525 -68760955 - AluJb SINE Alu -4 308 7 334 319 143 49 chr17 16677525 16678029 -68760451 + L2 LINE L2 2057 2647 -667 1262 203 95 16 chr17 16678845 16679160 -68759320 + L1ME1 LINE L1 5810 6149 -17 2190 122 3 0 chr17 16679688 16679992 -68758488 + AluSx SINE Alu 1 305 -7 2378 83 7 0 chr17 16680029 16680329 -68758151 + AluY SINE Alu 1 302 -9 1814 125 69 10 chr17 16680334 16680637 -68757843 + L1PB4 LINE L1 5834 6154 -2 25 65 0 0 chr17 16680637 16680683 -68757797 + AT_rich Low_complexity Low_complexity 1 46 0 408 200 0 0 chr17 16680694 16680794 -68757686 + CT-rich Low_complexity Low_complexity 2 101 0 1044 170 43 25 chr17 16681483 16681718 -68756762 + MER44D DNA MER2_type 1 509 -100 423 194 0 0 chr17 16681718 16681811 -68756669 + (TA)n Simple_repeat Simple_repeat 1 93 0 995 143 11 0 chr17 16681820 16681995 -68756485 + (TATG)n Simple_repeat Simple_repeat 2 178 0 307 292 0 0 chr17 16681995 16682075 -68756405 + L1MC4 LINE L1 6621 6703 -1339 241 315 0 0 chr17 16682095 16682184 -68756296 - L1MC4 LINE L1 -1339 6703 6615 339 300 0 0 chr17 16682215 16682305 -68756175 + L1MC4 LINE L1 6614 6703 -1339 273 197 0 0 chr17 16682306 16682367 -68756113 + (TA)n Simple_repeat Simple_repeat 1 61 0 599 124 11 0 chr17 16682371 16682460 -68756020 + MER44D DNA MER2_type 614 703 -2 830 183 0 14 chr17 16682460 16682602 -68755878 - AluJo/FRAM SINE Alu -16 296 157 465 193 12 0 chr17 16682602 16682685 -68755795 - AluS SINE Alu -228 84 1 232 338 95 65 chr17 16682770 16683170 -68755310 + L2 LINE L2 2856 3267 -5 1994 151 0 22 chr17 16685276 16685593 -68752887 - AluJb SINE Alu 0 312 3 1514 145 6 116 chr17 16685595 16685932 -68752548 - AluJb SINE Alu -2 300 1 298 300 70 45 chr17 16686412 16686614 -68751866 - MIR SINE MIR 0 262 55 342 138 0 38 chr17 16687483 16687563 -68750917 + (TTCC)n Simple_repeat Simple_repeat 4 80 0 2041 167 0 0 chr17 16687563 16687875 -68750605 - AluSx SINE Alu 0 312 1 1640 230 108 38 chr17 16688228 16688749 -68749731 + L2 LINE L2 2235 2791 -523 2507 66 0 0 chr17 16689484 16689789 -68748691 + AluY SINE Alu 1 305 -6 270 291 166 20 chr17 16690026 16690301 -68748179 + L2 LINE L2 1658 2015 -1299 1861 146 0 23 chr17 16690795 16691096 -68747384 - AluJo SINE Alu -16 296 3 2429 74 0 10 chr17 16691131 16691443 -68747037 + AluSc SINE Alu 1 309 0 26 88 0 0 chr17 16691718 16691786 -68746694 + AT_rich Low_complexity Low_complexity 1 68 0 22 35 0 0 chr17 16692057 16692086 -68746394 + AT_rich Low_complexity Low_complexity 1 29 0 754 68 29 10 chr17 16692376 16692479 -68746001 - U6 snRNA snRNA -2 105 1 2180 130 0 0 chr17 16692909 16693210 -68745270 + AluSx SINE Alu 1 301 -11 352 296 70 14 chr17 16693254 16693396 -68745084 - MER5B DNA MER1_type -27 151 2 21 0 0 0 chr17 16693592 16693613 -68744867 + AT_rich Low_complexity Low_complexity 1 21 0 1597 162 6 88 chr17 16694989 16695138 -68743342 + AluJb SINE Alu 2 112 -200 2061 121 0 0 chr17 16695138 16695447 -68743033 + AluSx SINE Alu 1 309 0 1597 162 6 88 chr17 16695447 16695624 -68742856 + AluJb SINE Alu 112 302 -10 374 304 39 0 chr17 16696305 16696407 -68742073 + L2 LINE L2 3204 3309 -4 626 286 65 23 chr17 16696418 16696635 -68741845 + MIR SINE MIR 3 228 -34 21 0 0 0 chr17 16698977 16698998 -68739482 + AT_rich Low_complexity Low_complexity 1 21 0 1296 91 29 38 chr17 16699051 16699261 -68739219 - L1PA13 LINE L1 -4 6159 5952 231 114 57 29 chr17 16699315 16699385 -68739095 + CT-rich Low_complexity Low_complexity 2 73 0 8702 84 21 67 chr17 16699480 16700930 -68737550 + SVA Other Other 3 1386 0 251 175 48 0 chr17 16701599 16701662 -68736818 - L1ME LINE L1 -350 5771 5706 2188 99 48 0 chr17 16701735 16702029 -68736451 + AluSg SINE Alu 1 308 -2 2177 105 7 0 chr17 16702429 16702723 -68735757 - AluSp SINE Alu -17 296 1 243 0 0 0 chr17 16703270 16703297 -68735183 + (A)n Simple_repeat Simple_repeat 1 27 0 216 0 0 0 chr17 16703899 16703923 -68734557 + (TA)n Simple_repeat Simple_repeat 2 25 0 39 22 0 0 chr17 16705628 16705674 -68732806 + AT_rich Low_complexity Low_complexity 1 46 0 23 0 0 0 chr17 16705802 16705825 -68732655 + AT_rich Low_complexity Low_complexity 1 23 0 5868 46 1 3 chr17 16706765 16707483 -68730997 - L1PA6 LINE L1 -6 6148 5432 973 200 0 0 chr17 16708631 16708796 -68729684 - FRAM SINE Alu 0 166 2 212 357 57 0 chr17 16708968 16709038 -68729442 - L2 LINE L2 -16 3256 3183 2260 117 3 0 chr17 16709676 16709976 -68728504 + AluSx SINE Alu 1 301 -11 210 37 0 0 chr17 16709977 16710004 -68728476 + (CA)n Simple_repeat Simple_repeat 2 28 0 239 261 14 14 chr17 16710604 16710617 -68727863 + A-rich Low_complexity Low_complexity 3 15 -129 661 205 31 0 chr17 16710617 16710744 -68727736 + FLAM_C SINE Alu 1 131 -2 239 261 14 14 chr17 16710744 16710760 -68727720 + A-rich Low_complexity Low_complexity 15 30 -114 2117 151 0 0 chr17 16710760 16711071 -68727409 + AluSx SINE Alu 1 311 -1 239 261 14 14 chr17 16711071 16711182 -68727298 + A-rich Low_complexity Low_complexity 29 144 0 233 237 145 61 chr17 16711668 16711799 -68726681 + Charlie8 DNA MER1_type 6 147 -2270 180 0 0 0 chr17 16712065 16712085 -68726395 + (TTTA)n Simple_repeat Simple_repeat 3 22 0 191 298 32 21 chr17 16712345 16712439 -68726041 - L3 LINE CR1 -170 1407 1313 2183 118 0 3 chr17 16712583 16712880 -68725600 - AluSx SINE Alu -16 296 1 23 78 0 0 chr17 16713116 16713167 -68725313 + AT_rich Low_complexity Low_complexity 1 51 0 2486 82 3 0 chr17 16713738 16714042 -68724438 + AluSp SINE Alu 1 305 -8 2178 90 31 7 chr17 16714448 16714738 -68723742 - AluSx SINE Alu -15 297 1 261 195 24 37 chr17 16714772 16714854 -68723626 + MIR SINE MIR 128 208 -54 330 281 21 10 chr17 16714904 16715000 -68723480 + L2 LINE L2 3213 3309 -4 2043 132 3 3 chr17 16715116 16715405 -68723075 + AluSx SINE Alu 1 289 -23 304 95 48 0 chr17 16715489 16715531 -68722949 + MER57A LTR ERV1 295 338 -65 29 0 0 0 chr17 16715532 16715561 -68722919 + AT_rich Low_complexity Low_complexity 1 29 0 435 19 0 0 chr17 16715827 16715879 -68722601 + (CA)n Simple_repeat Simple_repeat 2 53 0 2242 93 3 22 chr17 16715890 16716202 -68722278 - AluSq SINE Alu -7 306 1 24 32 0 0 chr17 16716244 16716275 -68722205 + AT_rich Low_complexity Low_complexity 1 31 0 203 100 0 25 chr17 16716574 16716614 -68721866 + (GAAAA)n Simple_repeat Simple_repeat 4 42 0 21 0 0 0 chr17 16716695 16716716 -68721764 + AT_rich Low_complexity Low_complexity 1 21 0 675 267 95 22 chr17 16716733 16717048 -68721432 + L1MEd LINE L1 982 1319 -4886 267 255 57 85 chr17 16717266 16717478 -68721002 + L1MEd LINE L1 1615 1820 -4576 3937 186 51 9 chr17 16717639 16718717 -68719763 + L1MB7 LINE L1 4997 6115 -69 1042 102 0 20 chr17 16718718 16718865 -68719615 + AluSc SINE Alu 152 295 -14 337 298 196 27 chr17 16719012 16719318 -68719162 + L1ME LINE L1 5319 5681 -481 2271 110 0 3 chr17 16721005 16721305 -68717175 + AluSg SINE Alu 1 299 -11 180 200 0 0 chr17 16721746 16721776 -68716704 + MER5A DNA MER1_type 145 174 -15 209 204 0 37 chr17 16721871 16721925 -68716555 - L2 LINE L2 -69 3244 3193 21 0 0 0 chr17 16722060 16722081 -68716399 + AT_rich Low_complexity Low_complexity 1 21 0 2363 93 0 0 chr17 16722186 16722486 -68715994 + AluSx SINE Alu 3 302 -10 497 271 102 62 chr17 16722588 16722804 -68715676 + L1ME LINE L1 5283 5522 -599 2428 86 0 0 chr17 16722804 16723107 -68715373 - AluSq SINE Alu -10 303 1 497 271 102 62 chr17 16723107 16723274 -68715206 + L1ME LINE L1 5522 5681 -440 2261 97 24 0 chr17 16723295 16723585 -68714895 + AluSx SINE Alu 1 297 -15 1192 133 0 0 chr17 16723764 16723937 -68714543 + AluSg/x SINE Alu 134 306 -4 286 235 103 37 chr17 16724063 16724199 -68714281 + HAL1 LINE L1 2007 2151 -356 414 194 121 16 chr17 16724213 16724337 -68714143 + HAL1 LINE L1 2248 2384 -123 2324 76 7 0 chr17 16724338 16724627 -68713853 + AluY SINE Alu 1 291 -20 2505 80 0 10 chr17 16724638 16724949 -68713531 + AluSc SINE Alu 1 308 -1 312 251 167 26 chr17 16725082 16725309 -68713171 - L1ME4a LINE L1 -41 6080 5822 773 306 76 48 chr17 16726011 16726574 -68711906 - L2 LINE L2 -1 3312 2736 1590 269 169 15 chr17 16726574 16727228 -68711252 - L2 LINE L2 -712 2602 1838 2667 191 109 44 chr17 16727228 16727915 -68710565 + MER44D DNA MER2_type 1 604 -1 1590 269 169 15 chr17 16727915 16727940 -68710540 - L2 LINE L2 -1476 1838 1818 220 302 16 0 chr17 16727957 16728020 -68710460 + L2 LINE L2 3233 3296 -17 2400 105 0 0 chr17 16728669 16728982 -68709498 - AluSq SINE Alu 0 313 1 258 263 0 53 chr17 16731545 16731621 -68706859 + MLT1J LTR MaLR 1 72 -439 1182 177 40 0 chr17 16731621 16731654 -68706826 + AluJb SINE Alu 87 117 -195 297 0 0 0 chr17 16731654 16731687 -68706793 + (TAAA)n Simple_repeat Simple_repeat 3 35 0 1182 177 40 0 chr17 16731687 16731851 -68706629 + AluJb SINE Alu 117 292 -20 464 241 194 61 chr17 16731877 16732222 -68706258 + MLT1J LTR MaLR 121 511 0 2149 128 7 0 chr17 16732633 16732937 -68705543 + AluSx SINE Alu 1 306 -6 236 224 0 0 chr17 16733301 16733350 -68705130 - L2 LINE L2 -4 3268 3220 498 237 65 7 chr17 16733371 16733510 -68704970 + MLT1J LTR MaLR 115 261 -250 706 316 113 40 chr17 16733606 16734452 -68704028 - L2 LINE L2 -219 3053 2148 217 135 19 39 chr17 16735021 16735073 -68703407 + C-rich Low_complexity Low_complexity 3 53 0 21 36 0 0 chr17 16735192 16735220 -68703260 + GC_rich Low_complexity Low_complexity 1 28 0 2533 63 0 3 chr17 16736054 16736354 -68702126 + AluSq SINE Alu 1 299 -14 2235 105 3 0 chr17 16736995 16737289 -68701191 - AluSg SINE Alu -15 295 1 1233 263 80 51 chr17 16737477 16737940 -68700540 - HAL1 LINE L1 -291 2216 1768 1745 164 27 17 chr17 16737940 16738233 -68700247 - AluJo SINE Alu -16 296 1 1519 136 0 0 chr17 16738242 16738455 -68700025 - AluJb SINE Alu -13 299 87 1233 263 80 51 chr17 16738455 16738529 -68699951 - HAL1 LINE L1 -746 1761 1653 412 162 0 0 chr17 16738529 16738597 -68699883 - AluJo SINE Alu -13 299 232 856 153 14 0 chr17 16738601 16738745 -68699735 - AluJo SINE Alu -166 146 1 1528 81 27 27 chr17 16738780 16739001 -68699479 - AluSp SINE Alu -7 306 86 2985 217 123 119 chr17 16739015 16739512 -68698968 - HAL1 LINE L1 -864 1643 1149 700 127 0 97 chr17 16739512 16739549 -68698931 - FLAM_A SINE Alu -169 142 103 2388 79 21 0 chr17 16739549 16739839 -68698641 + AluSp SINE Alu 2 297 -16 700 127 0 97 chr17 16739839 16739935 -68698545 - FLAM_A SINE Alu -208 103 22 2985 217 123 119 chr17 16739935 16740857 -68697623 - HAL1 LINE L1 -1358 1149 83 2155 128 0 13 chr17 16740857 16741161 -68697319 + AluSx SINE Alu 1 300 -12 2985 217 123 119 chr17 16741161 16741231 -68697249 - HAL1 LINE L1 -2424 83 15 2207 106 0 3 chr17 16741444 16741773 -68696707 + AluSc SINE Alu 1 328 0 754 153 0 16 chr17 16741786 16741910 -68696570 + FLAM_C SINE Alu 3 124 -19 1956 151 10 10 chr17 16741932 16742236 -68696244 + AluSx SINE Alu 1 304 -8 2284 110 3 0 chr17 16742371 16742670 -68695810 + AluSp SINE Alu 1 300 -13 2341 81 0 3 chr17 16742883 16743211 -68695269 + AluSx SINE Alu 1 327 0 685 143 29 0 chr17 16743217 16743322 -68695158 + FRAM SINE Alu 52 159 -17 21 36 0 0 chr17 16743419 16743447 -68695033 + AT_rich Low_complexity Low_complexity 1 28 0 534 234 52 75 chr17 16743681 16743988 -68694492 + L1ME4a LINE L1 5598 5897 -224 1058 151 235 8 chr17 16743989 16744227 -68694253 - AluSg1 SINE Alu -17 292 1 326 122 0 14 chr17 16744546 16744609 -68693871 + Alu SINE Alu 1 44 -258 1002 130 0 0 chr17 16744609 16744772 -68693708 + AluSg/x SINE Alu 144 306 0 315 240 48 122 chr17 16744797 16744872 -68693608 - L1ME4a LINE L1 -68 6053 5974 2493 74 0 0 chr17 16744872 16745171 -68693309 - AluY SINE Alu -12 299 1 315 240 48 122 chr17 16745171 16745202 -68693278 - L1ME4a LINE L1 -147 5974 5942 1373 183 90 24 chr17 16745202 16745492 -68692988 + AluJo SINE Alu 1 309 -3 2026 128 3 3 chr17 16745492 16745788 -68692692 + AluSx SINE Alu 1 296 -16 315 240 48 122 chr17 16745788 16745950 -68692530 - L1ME4a LINE L1 -177 5944 5803 2305 97 7 3 chr17 16746065 16746373 -68692107 - AluSx SINE Alu -3 309 1 891 154 0 0 chr17 16746444 16746574 -68691906 - FLAM_C SINE Alu 0 133 4 315 241 139 30 chr17 16746581 16746901 -68691579 + L1MB8 LINE L1 5564 5924 -254 182 233 17 0 chr17 16746972 16747032 -68691448 + (TATATG)n Simple_repeat Simple_repeat 6 66 0 31 20 0 20 chr17 16747180 16747200 -68691280 + AT_rich Low_complexity Low_complexity 1 20 -28 2325 90 3 0 chr17 16747200 16747488 -68690992 + AluSp SINE Alu 1 289 -24 31 20 0 20 chr17 16747488 16747516 -68690964 + AT_rich Low_complexity Low_complexity 20 48 0 2147 124 24 73 chr17 16748009 16748198 -68690282 - L1MA8 LINE L1 -1 6290 6093 819 146 8 15 chr17 16748198 16748328 -68690152 - FLAM_C SINE Alu -1 132 4 2147 124 24 73 chr17 16748328 16748495 -68689985 - L1MA8 LINE L1 -198 6093 5958 899 132 0 22 chr17 16748495 16748631 -68689849 - FLAM_C SINE Alu 0 133 1 2147 124 24 73 chr17 16748631 16748723 -68689757 - L1MA8 LINE L1 -333 5958 5863 2233 96 7 0 chr17 16748766 16749079 -68689401 + AluSq SINE Alu 1 315 0 2239 114 3 0 chr17 16749788 16750087 -68688393 - AluSx SINE Alu -12 300 1 756 264 41 15 chr17 16750124 16750436 -68688044 - MLT1I LTR MaLR 0 409 63 181 313 16 16 chr17 16750761 16750825 -68687655 + MIR3 SINE MIR 124 187 -21 2144 133 0 0 chr17 16751223 16751516 -68686964 + AluSx SINE Alu 1 293 -19 2424 102 0 0 chr17 16751741 16752045 -68686435 - AluSg SINE Alu -6 304 1 1769 176 3 13 chr17 16752157 16752464 -68686016 + AluJo SINE Alu 1 304 -8 1704 146 24 37 chr17 16753189 16753484 -68684996 - AluJb SINE Alu -21 291 1 680 40 0 10 chr17 16754958 16755059 -68683421 + SVA Other Other 767 866 -520 6662 63 5 94 chr17 16755076 16756134 -68682346 + SVA Other Other 433 1386 0 28 0 0 0 chr17 16756134 16756162 -68682318 + AT_rich Low_complexity Low_complexity 1 28 0 2195 123 7 0 chr17 16756494 16756794 -68681686 - AluSx SINE Alu -10 302 1 2394 76 0 17 chr17 16757390 16757692 -68680788 - AluY SINE Alu -14 297 1 404 274 115 37 chr17 16757730 16758000 -68680480 + L3 LINE CR1 761 1051 -526 193 332 133 20 chr17 16758028 16758374 -68680106 + L3 LINE CR1 1154 1538 -39 390 21 0 0 chr17 16758964 16759011 -68679469 + (TA)n Simple_repeat Simple_repeat 1 47 0 2140 116 33 3 chr17 16759014 16759315 -68679165 - AluSg SINE Alu 0 310 1 546 160 50 57 chr17 16760713 16760792 -68677688 + MER6 DNA MER2_type -63 15 -850 2222 145 9 52 chr17 16760792 16761213 -68677267 + MER57A LTR ERV1 1 403 0 546 160 50 57 chr17 16761213 16761292 -68677188 + MER6 DNA MER2_type 15 843 -22 1674 112 146 3 chr17 16761362 16761657 -68676823 - MER1B DNA MER1_type 0 337 1 390 260 169 45 chr17 16761657 16761899 -68676581 - L2 LINE L2 -52 3261 2990 1518 139 0 34 chr17 16762124 16762361 -68676119 + AluJb SINE Alu 76 304 -8 385 255 49 0 chr17 16763064 16763166 -68675314 + L2 LINE L2 3185 3291 -22 2240 122 0 10 chr17 16763177 16763480 -68675000 + AluSx SINE Alu 1 300 -12 1040 285 88 35 chr17 16764000 16764453 -68674027 + MLT1L LTR MaLR 121 597 -18 195 214 54 36 chr17 16764453 16764509 -68673971 - MIR3 SINE MIR -27 181 125 198 267 307 0 chr17 16764893 16764968 -68673512 - L2 LINE L2 -38 3234 3137 626 314 163 6 chr17 16765220 16765564 -68672916 - L2 LINE L2 -559 2755 2358 2207 102 3 13 chr17 16765628 16765941 -68672539 - AluY SINE Alu -1 310 1 259 339 107 8 chr17 16766325 16766446 -68672034 - MIR SINE MIR -96 166 34 1020 184 153 0 chr17 16766726 16766922 -68671558 + MER8 DNA MER2_type 14 239 0 1321 218 92 30 chr17 16766926 16767425 -68671055 + MER39 LTR ERV1 24 512 -195 377 112 2 0 chr17 16767426 16767491 -68670989 - Alu SINE Alu 0 301 244 2307 97 7 13 chr17 16767579 16767878 -68670602 + AluSx SINE Alu 1 297 -15 209 279 183 10 chr17 16769693 16769797 -68668683 + L2 LINE L2 3137 3258 -14 2506 60 3 0 chr17 16770032 16770330 -68668150 - AluY SINE Alu -12 299 1 376 216 31 74 chr17 16770417 16770472 -68668008 + L1M4 LINE L1 3437 3493 -2653 2394 86 0 26 chr17 16770472 16770785 -68667695 - AluSq SINE Alu -8 305 1 376 216 31 74 chr17 16770785 16770891 -68667589 + L1M4 LINE L1 3493 3591 -2555 1180 202 49 2 chr17 16771723 16772001 -68666479 - L1MC4 LINE L1 -674 7368 7049 2139 196 184 55 chr17 16772008 16772292 -68666188 + L1MC4 LINE L1 6705 6951 -1091 2144 110 50 3 chr17 16772292 16772591 -68665889 + AluSq SINE Alu 1 313 0 2139 196 184 55 chr17 16772591 16772758 -68665722 + L1MC4 LINE L1 6951 7095 -947 2237 103 0 0 chr17 16772758 16773089 -68665391 - AluSx SINE Alu 0 331 1 2139 196 184 55 chr17 16773089 16773119 -68665361 + L1MC4 LINE L1 7095 7120 -922 2095 157 10 55 chr17 16773119 16773534 -68664946 + MSTD LTR MaLR 1 396 0 2139 196 184 55 chr17 16773534 16773816 -68664664 + L1MC4 LINE L1 7120 7570 -472 399 203 0 0 chr17 16773816 16773885 -68664595 - AluJ/FRAM SINE Alu -2 300 232 2441 77 7 0 chr17 16773925 16774222 -68664258 - AluY SINE Alu -10 301 3 2432 68 0 17 chr17 16774224 16774520 -68663960 - AluY SINE Alu -20 291 1 2942 3 0 0 chr17 16774530 16774837 -68663643 - AluY SINE Alu -4 307 1 291 130 37 0 chr17 16774837 16774891 -68663589 + MADE1 DNA Mariner 24 79 -1 1417 160 55 0 chr17 16774891 16775110 -68663370 - AluJo SINE Alu -79 233 3 396 168 144 104 chr17 16775113 16775286 -68663194 + L1MC4 LINE L1 7561 7740 -302 2392 114 0 0 chr17 16775309 16775615 -68662865 + AluSx SINE Alu 1 306 -6 296 271 0 0 chr17 16775653 16775738 -68662742 + L1MC4 LINE L1 7925 8009 -33 204 343 125 21 chr17 16776393 16776720 -68661760 - L2 LINE L2 -337 2977 2617 2403 90 7 0 chr17 16776792 16777091 -68661389 + AluSp SINE Alu 1 301 -12 245 222 162 17 chr17 16777515 16777632 -68660848 + L2 LINE L2 2385 2518 -796 2348 100 7 13 chr17 16778210 16778519 -68659961 + AluSq SINE Alu 1 307 -6 2268 107 0 3 chr17 16779101 16779392 -68659088 + AluSx SINE Alu 12 301 -11 2144 119 3 28 chr17 16779402 16779721 -68658759 + AluSx SINE Alu 1 311 -1 591 268 101 42 chr17 16779721 16779776 -68658704 + HAL1 LINE L1 1236 1286 -1221 1140 211 13 4 chr17 16779776 16780013 -68658467 + MER8 DNA MER2_type 1 239 0 591 268 101 42 chr17 16780013 16780334 -68658146 + HAL1 LINE L1 1286 1634 -873 1094 153 0 0 chr17 16780335 16780492 -68657988 - AluJb SINE Alu -22 290 134 2486 81 0 0 chr17 16780831 16781126 -68657354 + AluSx SINE Alu 1 295 -17 410 315 136 5 chr17 16782600 16782784 -68655696 + MIR SINE MIR 10 217 -45 299 298 106 7 chr17 16784339 16784490 -68653990 - L2 LINE L2 -500 2814 2649 209 301 26 44 chr17 16784520 16784633 -68653847 - L2 LINE L2 -1348 1966 1856 409 220 65 68 chr17 16784720 16785120 -68653360 - MLT1D LTR MaLR -5 500 2 2162 88 70 0 chr17 16785235 16785520 -68652960 - AluSq SINE Alu -8 305 1 2114 149 0 0 chr17 16785581 16785877 -68652603 - AluSx SINE Alu -14 298 3 2474 85 0 0 chr17 16785889 16786184 -68652296 - AluSq SINE Alu -18 295 1 225 209 60 30 chr17 16787267 16787334 -68651146 + MER5A DNA MER1_type 74 142 -47 * 275 269 43 0 chr17 16787274 16787367 -68651113 - MER5A DNA MER1_type -69 120 24 282 318 100 21 chr17 16788284 16788518 -68649962 + MIR SINE MIR 1 250 -12 213 311 105 39 chr17 16790764 16791050 -68647430 + L2 LINE L2 2228 2532 -782 649 190 40 58 chr17 16791305 16791479 -68647001 + L1MB7 LINE L1 6006 6176 -8 1793 144 0 33 chr17 16791489 16791794 -68646686 + AluJo SINE Alu 13 307 -5 2173 153 59 2 chr17 16792585 16792990 -68645490 - MSTA LTR MaLR 0 428 1 209 104 0 62 chr17 16793262 16793310 -68645170 + (TTA)n Simple_repeat Simple_repeat 2 46 0 1952 163 3 7 chr17 16793363 16793664 -68644816 - AluJo SINE Alu -12 300 1 395 296 126 0 chr17 16793699 16793834 -68644646 + MIR SINE MIR 21 172 -90 616 220 71 0 chr17 16794120 16794261 -68644219 - MLT1L LTR MaLR -144 471 321 2506 71 7 10 chr17 16795224 16795532 -68642948 - AluY SINE Alu -4 307 1 793 227 76 62 chr17 16795637 16795769 -68642711 + HAL1 LINE L1 1796 1925 -582 2037 131 0 7 chr17 16795769 16796075 -68642405 + AluSg SINE Alu 1 304 -6 793 227 76 62 chr17 16796075 16796312 -68642168 + HAL1 LINE L1 1925 2170 -337 372 273 40 60 chr17 16796312 16796462 -68642018 + MER20B DNA MER1_type 19 165 -618 2271 125 0 0 chr17 16796508 16796819 -68641661 + AluY SINE Alu 1 311 0 374 78 0 31 chr17 16796860 16796924 -68641556 + (TTCC)n Simple_repeat Simple_repeat 3 64 0 448 238 82 0 chr17 16796924 16797046 -68641434 - FLAM_C SINE Alu 0 133 2 4313 215 45 63 chr17 16797106 16797237 -68641243 + L1M4 LINE L1 472 604 -6042 2346 113 7 0 chr17 16797237 16797547 -68640933 + AluSq SINE Alu 1 312 -1 4313 215 45 63 chr17 16797547 16798122 -68640358 + L1M4 LINE L1 604 1188 -5458 1760 180 6 13 chr17 16798122 16798433 -68640047 - AluJo SINE Alu 0 312 4 4313 215 45 63 chr17 16798433 16798490 -68639990 + L1M4 LINE L1 1188 1245 -5401 2090 136 7 7 chr17 16798490 16798800 -68639680 + AluSx SINE Alu 1 310 -2 4313 215 45 63 chr17 16798800 16798926 -68639554 + L1M4 LINE L1 1245 1372 -5274 1888 138 37 24 chr17 16798926 16799054 -68639426 + AluSx SINE Alu 1 126 -186 198 0 0 0 chr17 16799054 16799076 -68639404 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 1888 138 37 24 chr17 16799076 16799243 -68639237 + AluSx SINE Alu 126 300 -12 4313 215 45 63 chr17 16799243 16800003 -68638477 + L1M4 LINE L1 1372 2231 -4415 1990 160 3 3 chr17 16800003 16800309 -68638171 + AluSx SINE Alu 1 306 -6 4313 215 45 63 chr17 16800309 16800458 -68638022 + L1M4 LINE L1 2231 2381 -4265 2255 120 10 0 chr17 16800586 16800887 -68637593 + AluSg SINE Alu 1 304 -6 4224 213 50 86 chr17 16800892 16801855 -68636625 + L1 LINE L1 3788 4784 -1377 2497 82 0 0 chr17 16801855 16802158 -68636322 + AluY SINE Alu 1 303 -8 4224 213 50 86 chr17 16802158 16802593 -68635887 + L1 LINE L1 4784 5233 -928 2415 92 7 0 chr17 16802593 16802897 -68635583 - AluSg SINE Alu -4 306 1 4224 213 50 86 chr17 16802897 16803079 -68635401 + L1 LINE L1 5233 5309 -852 2204 125 13 0 chr17 16803079 16803384 -68635096 + AluSq SINE Alu 1 309 -4 4224 213 50 86 chr17 16803384 16803457 -68635023 + L1 LINE L1 5309 5383 -778 233 250 21 73 chr17 16803482 16803578 -68634902 - MIR SINE MIR -73 135 45 980 136 0 0 chr17 16803943 16804075 -68634405 - FLAM_C SINE Alu -11 132 1 2053 152 3 0 chr17 16804514 16804823 -68633657 + AluJb SINE Alu 1 310 -2 24 0 0 0 chr17 16804873 16804897 -68633583 + AT_rich Low_complexity Low_complexity 1 24 0 2466 137 20 24 chr17 16805095 16805548 -68632932 - L1MB3 LINE L1 -43 6140 5690 1131 282 62 36 chr17 16805910 16806541 -68631939 + L2 LINE L2 260 906 -2408 336 247 253 58 chr17 16806684 16806992 -68631488 + L2 LINE L2 1635 2002 -1312 1397 51 80 0 chr17 16807002 16807178 -68631302 + AluY SINE Alu 1 190 -121 224 306 14 0 chr17 16807191 16807263 -68631217 + L2 LINE L2 2260 2332 -982 953 281 89 56 chr17 16807361 16807441 -68631039 + L2 LINE L2 2560 2636 -677 2446 84 0 16 chr17 16807441 16807612 -68630868 - AluSq SINE Alu -9 304 139 2298 101 0 3 chr17 16807612 16807908 -68630572 - AluSc SINE Alu -14 295 1 2446 84 0 16 chr17 16807908 16808045 -68630435 - AluSq SINE Alu -174 139 1 953 281 89 56 chr17 16808045 16808111 -68630369 + L2 LINE L2 2636 2698 -615 1607 173 7 18 chr17 16808111 16808383 -68630097 - AluJo SINE Alu -5 307 39 953 281 89 56 chr17 16808383 16808918 -68629562 + L2 LINE L2 2698 3281 -32 1910 115 0 11 chr17 16809130 16809391 -68629089 - AluSg1 SINE Alu -20 289 32 419 304 21 75 chr17 16809568 16809661 -68628819 + HAL1 LINE L1 2277 2373 -134 1486 178 81 34 chr17 16809661 16809774 -68628706 + AluJo SINE Alu 1 107 -205 2405 97 0 0 chr17 16809774 16810073 -68628407 + AluSx SINE Alu 1 299 -13 1486 178 81 34 chr17 16810073 16810257 -68628223 + AluJo SINE Alu 107 312 0 419 304 21 75 chr17 16810257 16810353 -68628127 + HAL1 LINE L1 2373 2453 -54 1997 90 0 34 chr17 16810353 16810619 -68627861 - AluY SINE Alu -18 293 37 419 304 21 75 chr17 16810619 16810668 -68627812 + HAL1 LINE L1 2453 2503 -4 2148 133 0 19 chr17 16810892 16811175 -68627305 + AluSq SINE Alu 1 279 -34 214 0 26 51 chr17 16811175 16811214 -68627266 + (CAAAA)n Simple_repeat Simple_repeat 2 85 0 2148 133 0 19 chr17 16811214 16811245 -68627235 + AluSq SINE Alu 279 309 -4 2463 70 0 7 chr17 16811399 16811697 -68626783 + AluY SINE Alu 1 296 -15 183 42 0 0 chr17 16811724 16811748 -68626732 + (GA)n Simple_repeat Simple_repeat 2 25 0 2127 96 0 63 chr17 16811753 16812086 -68626394 + AluSx SINE Alu 1 312 0 1629 258 80 52 chr17 16812088 16812488 -68625992 + L1MC4a LINE L1 5315 5743 -2065 600 242 15 0 chr17 16812488 16812620 -68625860 - MER94 DNA DNA 0 134 1 1629 258 80 52 chr17 16812620 16812908 -68625572 + L1MC4a LINE L1 5743 6022 -1786 674 251 77 51 chr17 16813108 16813468 -68625012 + MLT1J LTR MaLR 65 510 -1 2317 87 0 0 chr17 16814362 16814660 -68623820 - AluSc SINE Alu -11 298 1 1645 140 4 8 chr17 16814719 16814984 -68623496 - L1PB4 LINE L1 0 6156 5893 31 0 0 0 chr17 16815231 16815262 -68623218 + AT_rich Low_complexity Low_complexity 1 31 0 240 244 41 89 chr17 16815482 16815605 -68622875 - L2 LINE L2 -56 3216 3100 679 179 36 77 chr17 16816225 16816332 -68622148 + MER53 DNA DNA 27 126 -63 2085 101 10 0 chr17 16816332 16816630 -68621850 + AluSg SINE Alu 1 301 -9 679 179 36 77 chr17 16816630 16816690 -68621790 + MER53 DNA DNA 126 187 -2 817 220 134 24 chr17 16816794 16817085 -68621395 + MLT1A1 LTR MaLR 10 332 -33 1298 159 68 4 chr17 16817798 16818062 -68620418 - AluJo SINE Alu -31 281 1 605 282 0 0 chr17 16818137 16818268 -68620212 + MIR SINE MIR 13 143 -119 1667 203 81 47 chr17 16818326 16818770 -68619710 + LTR2B LTR ERV1 32 490 0 1267 201 49 43 chr17 16819142 16819555 -68618925 + MLT2B1 LTR ERVL 1 414 0 2368 177 28 26 chr17 16819631 16820135 -68618345 + MLT1D LTR MaLR 1 505 0 1434 194 7 27 chr17 16820596 16820890 -68617590 + AluJo SINE Alu 1 288 -24 203 321 0 0 chr17 16822364 16822420 -68616060 + (TG)n Simple_repeat Simple_repeat 1 56 0 1699 152 0 48 chr17 16822706 16822870 -68615610 - AluJo SINE Alu -13 299 155 2103 116 0 7 chr17 16822870 16823172 -68615308 - AluSx SINE Alu -12 300 1 1699 152 0 48 chr17 16823172 16823317 -68615163 - AluJo SINE Alu -157 155 5 395 275 96 42 chr17 16824029 16824196 -68614284 - MER5B DNA MER1_type -1 177 2 1369 95 77 45 chr17 16824364 16824504 -68613976 + MER30 DNA MER1_type 3 154 -76 2059 115 0 3 chr17 16824504 16824800 -68613680 + AluSx SINE Alu 1 295 -17 1369 95 77 45 chr17 16824800 16824880 -68613600 + MER30 DNA MER1_type 154 230 0 616 226 25 50 chr17 16825879 16826064 -68612416 - FRAM SINE Alu 0 178 1 853 163 36 60 chr17 16826856 16827022 -68611458 + AluJb SINE Alu 139 300 -12 5971 218 55 43 chr17 16828350 16829153 -68609327 + L1MC/D LINE L1 3491 4283 -1991 2061 121 0 0 chr17 16829153 16829443 -68609037 + AluSg SINE Alu 1 290 -20 5971 218 55 43 chr17 16829443 16829464 -68609016 + L1MC/D LINE L1 4283 4302 -1972 1730 133 4 7 chr17 16829464 16829735 -68608745 + AluSc SINE Alu 38 307 -2 5971 218 55 43 chr17 16829735 16830431 -68608049 + L1MC/D LINE L1 4302 4988 -1286 2071 64 60 0 chr17 16830431 16830713 -68607767 + AluY SINE Alu 1 299 -12 5971 218 55 43 chr17 16830713 16830825 -68607655 + L1MC/D LINE L1 4988 5097 -1177 809 153 0 0 chr17 16830825 16830943 -68607537 + FLAM_C SINE Alu 1 118 -15 5971 218 55 43 chr17 16830943 16831328 -68607152 + L1MC/D LINE L1 5097 5529 -745 341 307 48 12 chr17 16832024 16832190 -68606290 - L1ME3A LINE L1 -4 6166 5995 2088 132 32 64 chr17 16832522 16832604 -68605876 + L1MB3 LINE L1 5758 5841 -342 1772 102 58 4 chr17 16832604 16832878 -68605602 + AluSx SINE Alu 7 295 -17 2088 132 32 64 chr17 16832878 16833233 -68605247 + L1MB3 LINE L1 5841 6181 -2 294 292 343 11 chr17 16833395 16833573 -68604907 + MIR SINE MIR 15 251 -11 2252 93 7 0 chr17 16833611 16833912 -68604568 - AluSp SINE Alu -10 303 1 4696 107 7 34 chr17 16834309 16834346 -68604134 + L1PA16 LINE L1 5448 5484 -682 1616 180 16 22 chr17 16834346 16834657 -68603823 + AluJo SINE Alu 1 309 -3 4696 107 7 34 chr17 16834657 16834966 -68603514 + L1PA16 LINE L1 5484 5800 -366 2172 112 0 0 chr17 16834966 16835270 -68603210 + AluSc SINE Alu 1 304 -5 4696 107 7 34 chr17 16835270 16835661 -68602819 + L1PA16 LINE L1 5800 6166 0 2192 110 0 0 chr17 16835849 16836148 -68602332 - AluSx SINE Alu -13 299 1 1361 85 0 0 chr17 16836429 16836606 -68601874 + AluSg SINE Alu 1 177 -133 892 129 7 0 chr17 16836664 16836811 -68601669 + AluSg/q SINE Alu 165 312 -1 374 305 42 3 chr17 16837284 16837488 -68600992 - L1M3 LINE L1 -683 5497 5289 1711 175 0 0 chr17 16837511 16837808 -68600672 - AluJo SINE Alu -15 297 1 548 225 59 36 chr17 16837814 16838075 -68600405 - L1MEd LINE L1 -4863 1342 1162 378 301 121 35 chr17 16838193 16838475 -68600005 + MLT1L LTR MaLR 201 506 -109 636 233 82 61 chr17 16838522 16838900 -68599580 - L1MEd LINE L1 -5034 1171 786 315 310 66 88 chr17 16838973 16839247 -68599233 - L1MEd LINE L1 -5592 613 346 425 268 53 75 chr17 16839248 16839359 -68599121 + L2 LINE L2 2115 2227 -1087 806 184 95 16 chr17 16839359 16839549 -68598931 - MER3 DNA MER1_type 0 209 5 425 268 53 75 chr17 16839549 16839702 -68598778 + L2 LINE L2 2227 2373 -941 1723 170 28 81 chr17 16839784 16840214 -68598266 + MLT2D LTR ERVL 1 407 -7 363 314 116 6 chr17 16840328 16840500 -68597980 + L2 LINE L2 2394 2584 -730 853 231 61 5 chr17 16841043 16841255 -68597225 + MER58A DNA MER1_type 1 224 0 361 211 40 0 chr17 16841314 16841390 -68597090 + MER103 DNA DNA 28 106 -60 399 127 0 0 chr17 16841566 16841629 -68596851 + (GGAA)n Simple_repeat Simple_repeat 4 66 0 225 94 0 0 chr17 16842429 16842461 -68596019 + (A)n Simple_repeat Simple_repeat 1 32 0 1720 145 23 26 chr17 16842511 16842624 -68595856 + AluSx SINE Alu 1 113 -199 1945 122 3 3 chr17 16842624 16842910 -68595570 + AluSq SINE Alu 1 286 -27 1720 145 23 26 chr17 16842910 16842932 -68595548 + AluSx SINE Alu 113 134 -178 2057 105 0 38 chr17 16842932 16843246 -68595234 + AluSx SINE Alu 1 302 -10 1720 145 23 26 chr17 16843246 16843413 -68595067 + AluSx SINE Alu 134 303 -9 2126 88 3 3 chr17 16843779 16844090 -68594390 - AluSx SINE Alu 0 311 1 271 377 58 9 chr17 16844225 16844448 -68594032 - L1MEd LINE L1 -6014 382 149 405 0 0 0 chr17 16844575 16844620 -68593860 + (TAAA)n Simple_repeat Simple_repeat 2 46 0 581 238 23 57 chr17 16844681 16844872 -68593608 - MER6 DNA MER2_type -1 864 -52 287 317 37 0 chr17 16844985 16845067 -68593413 + MIR3 SINE MIR 76 160 -48 2211 109 0 0 chr17 16845128 16845432 -68593048 - AluSx SINE Alu -8 304 1 6043 94 21 19 chr17 16845572 16846463 -68592017 + L1PA11 LINE L1 5278 6170 -4 731 177 82 0 chr17 16846463 16846610 -68591870 - MER3 DNA MER1_type -50 159 1 557 318 114 4 chr17 16846723 16846959 -68591521 + MIR SINE MIR 1 262 0 275 211 34 6 chr17 16847025 16847096 -68591384 - L1ME LINE L1 -421 5749 5679 2126 88 3 3 chr17 16847636 16847949 -68590531 - AluSx SINE Alu 0 313 1 262 381 58 9 chr17 16848084 16848307 -68590173 - L1MEc LINE L1 -6014 382 149 351 0 0 0 chr17 16848434 16848473 -68590007 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 584 303 112 18 chr17 16848536 16849014 -68589466 + L1MC/D LINE L1 5237 5763 -490 1987 119 0 14 chr17 16849014 16849322 -68589158 - AluSx SINE Alu 0 304 1 584 303 112 18 chr17 16849322 16849336 -68589144 + L1MC/D LINE L1 5763 5774 -479 21 0 0 0 chr17 16849339 16849360 -68589120 + AT_rich Low_complexity Low_complexity 1 21 0 193 335 6 89 chr17 16849473 16849652 -68588828 + L3 LINE CR1 646 809 -768 2199 104 3 16 chr17 16849766 16850083 -68588397 + AluSq SINE Alu 1 313 0 396 0 0 0 chr17 16850083 16850127 -68588353 + (TA)n Simple_repeat Simple_repeat 2 45 0 570 222 66 101 chr17 16850341 16850746 -68587734 + MLT1H1 LTR MaLR 1 595 0 2233 75 7 23 chr17 16850953 16851261 -68587219 - AluY SINE Alu -8 303 1 581 238 23 57 chr17 16852744 16852935 -68585545 - MER6 DNA MER2_type -1 864 -52 287 317 37 0 chr17 16853048 16853130 -68585350 + MIR3 SINE MIR 76 160 -48 2211 109 0 0 chr17 16853191 16853495 -68584985 - AluSx SINE Alu -8 304 1 6067 93 21 19 chr17 16853635 16854527 -68583953 + L1PA11 LINE L1 5278 6171 -3 731 177 82 0 chr17 16854527 16854674 -68583806 - MER3 DNA MER1_type -50 159 1 557 318 114 4 chr17 16854787 16855023 -68583457 + MIR SINE MIR 1 262 0 275 196 36 0 chr17 16855089 16855145 -68583335 - L1MC/D LINE L1 -2061 5747 5690 259 247 130 13 chr17 16855267 16855344 -68583136 - L1MB3 LINE L1 -268 5915 5830 884 209 0 0 chr17 16856334 16856497 -68581983 - FRAM SINE Alu -16 160 1 1437 204 50 23 chr17 16857173 16857516 -68580964 + L1MB3 LINE L1 5830 6181 -2 2185 110 0 0 chr17 16857526 16857835 -68580645 + AluY SINE Alu 1 309 -2 2386 63 0 0 chr17 16859090 16859391 -68579089 + AluY SINE Alu 1 301 -10 1645 175 7 13 chr17 16859455 16859758 -68578722 - AluJo SINE Alu -11 301 1 720 314 95 57 chr17 16859874 16860368 -68578112 + L1ME LINE L1 3694 4206 -1940 2392 213 163 86 chr17 16860912 16861874 -68576606 + HAL1 LINE L1 14 900 -1607 2374 114 41 3 chr17 16861874 16862243 -68576237 + L1MB2 LINE L1 5785 6167 -4 2392 213 163 86 chr17 16862243 16862543 -68575937 + HAL1 LINE L1 900 1175 -1332 237 132 0 0 chr17 16862543 16862581 -68575899 + (GAAA)n Simple_repeat Simple_repeat 2 39 0 2392 213 163 86 chr17 16862581 16863115 -68575365 + HAL1 LINE L1 1175 1666 -841 2256 101 10 0 chr17 16863115 16863413 -68575067 + AluSx SINE Alu 1 301 -11 2392 213 163 86 chr17 16863413 16863757 -68574723 + HAL1 LINE L1 1666 2398 -109 314 300 100 16 chr17 16864060 16864250 -68574230 + L1ME LINE L1 5487 5692 -429 1488 217 0 14 chr17 16864304 16864590 -68573890 - AluJo SINE Alu -30 282 1 3459 144 10 3 chr17 16864705 16865492 -68572988 - L1P5 LINE L1 -388 5763 4970 4443 169 50 18 chr17 16865496 16866441 -68572039 + L1 LINE L1 3835 4809 -1337 1603 180 40 15 chr17 16866456 16866783 -68571697 - L1MB5 LINE L1 -38 6136 5802 2309 185 69 14 chr17 16866787 16867296 -68571184 - MER68 LTR ERV1 -25 537 1 1374 155 109 0 chr17 16868119 16868358 -68570122 - AluJb SINE Alu -47 265 1 375 62 250 0 chr17 16868419 16868483 -68569997 + MADE1 DNA Mariner 1 80 0 806 219 10 42 chr17 16868500 16868692 -68569788 - MER58A DNA MER1_type -9 215 30 923 179 0 0 chr17 16869373 16869539 -68568941 - AluSg/x SINE Alu 0 302 137 821 118 0 8 chr17 16869640 16869759 -68568721 - AluSq/x SINE Alu -195 118 1 32 81 0 0 chr17 16869762 16869836 -68568644 + AT_rich Low_complexity Low_complexity 1 74 0 26 0 0 0 chr17 16869907 16869933 -68568547 + AT_rich Low_complexity Low_complexity 1 26 0 2330 80 0 29 chr17 16869996 16870307 -68568173 - AluY SINE Alu -9 302 1 1573 347 56 8 chr17 16870314 16870416 -68568064 + L1ME3A LINE L1 5083 5179 -991 4829 22 0 0 chr17 16870416 16870926 -68567554 - SVA Other Other -7 1379 870 1573 347 56 8 chr17 16870926 16871580 -68566900 + L1ME3A LINE L1 5179 5884 -286 574 129 0 0 chr17 16871580 16871673 -68566807 + LTR9B LTR ERV1 468 560 -84 2211 112 0 7 chr17 16871954 16872259 -68566221 + AluSx SINE Alu 1 303 -9 3316 133 31 26 chr17 16872544 16873122 -68565358 + LTR35 LTR ERV1 38 618 0 209 327 97 18 chr17 16873122 16873235 -68565245 - MER91A DNA MER1_type -27 169 48 1665 170 61 4 chr17 16873868 16873980 -68564500 + AluJo SINE Alu 7 111 -201 234 0 0 0 chr17 16873980 16874006 -68564474 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 1665 170 61 4 chr17 16874006 16874170 -68564310 + AluJo SINE Alu 111 299 -13 413 113 32 0 chr17 16874619 16874681 -68563799 + AluSg/x SINE Alu 166 229 -83 1993 137 26 16 chr17 16875004 16875311 -68563169 + AluSg SINE Alu 1 310 0 404 145 0 0 chr17 16876895 16876957 -68561523 - MER45A DNA AcHobo -52 126 65 1252 322 62 83 chr17 16877195 16877664 -68560816 - LTR2B LTR ERV1 0 490 32 729 158 0 47 chr17 16877763 16877890 -68560590 - FLAM_A SINE Alu -10 132 12 200 367 100 0 chr17 16877918 16878038 -68560442 - MIR3 SINE MIR -7 201 70 647 176 59 17 chr17 16878449 16878568 -68559912 + FLAM_C SINE Alu 1 124 -9 3258 141 17 33 chr17 16879177 16879753 -68558727 + L1MB1 LINE L1 5367 5933 -235 8922 125 50 8 chr17 16879774 16881127 -68557353 - THE1C-int LTR MaLR -170 1410 1 1467 126 53 148 chr17 16881129 16881541 -68556939 - THE1C LTR MaLR -2 373 1 1090 109 81 101 chr17 16881542 16881674 -68556806 + L1MB1 LINE L1 5926 6052 -116 1248 103 56 5 chr17 16881674 16881868 -68556612 + L1PA16 LINE L1 5953 6157 -9 1090 109 81 101 chr17 16881868 16881983 -68556497 + L1MB1 LINE L1 6052 6168 0 629 217 25 84 chr17 16882204 16882335 -68556145 + MIR SINE MIR 69 185 -77 2230 115 3 3 chr17 16882335 16882639 -68555841 + AluSx SINE Alu 1 304 -8 629 217 25 84 chr17 16882639 16882710 -68555770 + MIR SINE MIR 185 259 -3 1868 243 69 59 chr17 16882968 16883311 -68555169 - L1MCa LINE L1 -2030 4396 4058 2289 84 3 0 chr17 16883311 16883623 -68554857 + AluSp SINE Alu 1 313 0 1868 243 69 59 chr17 16883623 16884188 -68554292 - L1MCa LINE L1 -2368 4058 3478 655 299 82 49 chr17 16884190 16885096 -68553384 - L1MCa LINE L1 -4669 1938 988 248 261 136 45 chr17 16886212 16886388 -68552092 + LTR67 LTR ERVL 358 549 -8 340 276 0 75 chr17 16886583 16886717 -68551763 - L2 LINE L2 -1 3312 3189 231 61 0 0 chr17 16886789 16886822 -68551658 + (CA)n Simple_repeat Simple_repeat 2 34 0 241 270 0 0 chr17 16886822 16886885 -68551595 + L1ME4a LINE L1 5955 6017 -104 2451 68 3 0 chr17 16887436 16887729 -68550751 - AluY SINE Alu -13 298 5 486 75 0 0 chr17 16890636 16890703 -68547777 + (TG)n Simple_repeat Simple_repeat 2 68 0 2087 135 13 13 chr17 16890772 16891084 -68547396 + AluSx SINE Alu 1 312 0 395 105 0 7 chr17 16891092 16891153 -68547327 + Alu SINE Alu 3 55 -245 1530 186 19 0 chr17 16891154 16891412 -68547068 - AluJb SINE Alu -49 263 1 2129 135 78 66 chr17 16891560 16891892 -68546588 + MSTA LTR MaLR 1 328 -100 2327 97 0 7 chr17 16891892 16892191 -68546289 - AluY SINE Alu -13 298 2 2129 135 78 66 chr17 16892191 16892238 -68546242 + MSTA LTR MaLR 328 373 -55 2135 141 0 0 chr17 16892238 16892537 -68545943 - AluSx SINE Alu -13 299 1 2129 135 78 66 chr17 16892537 16892579 -68545901 + MSTA LTR MaLR 373 428 0 183 281 288 13 chr17 16892593 16892746 -68545734 - MIR SINE MIR -30 232 38 21 0 0 0 chr17 16892832 16892853 -68545627 + AT_rich Low_complexity Low_complexity 1 21 0 864 173 0 0 chr17 16893291 16893424 -68545056 - AluSq/x SINE Alu -180 133 1 2116 123 10 10 chr17 16894667 16894975 -68543505 - AluSx SINE Alu -4 308 1 237 83 0 0 chr17 16895395 16895431 -68543049 + (TG)n Simple_repeat Simple_repeat 1 36 0 1550 200 24 0 chr17 16895630 16895925 -68542555 + AluJb SINE Alu 1 302 -10 446 295 113 43 chr17 16895962 16896224 -68542256 + L1ME4a LINE L1 5257 5499 -622 2647 52 0 3 chr17 16896224 16896534 -68541946 + AluY SINE Alu 1 309 -2 446 295 113 43 chr17 16896534 16896979 -68541501 + L1ME4a LINE L1 5499 6019 -102 2880 3 0 0 chr17 16897189 16897491 -68540989 + AluYa5 SINE Alu 1 302 -9 2259 111 7 0 chr17 16897730 16898037 -68540443 + AluY SINE Alu 1 309 -2 3494 91 20 14 chr17 16898800 16899308 -68539172 - MER9 LTR ERVK 0 511 1 184 316 13 13 chr17 16901248 16901327 -68537153 - MIR3 SINE MIR -12 196 118 204 40 0 0 chr17 16903370 16903395 -68535085 + (TTCTCC)n Simple_repeat Simple_repeat 6 30 0 281 336 0 40 chr17 16904411 16904560 -68533920 + MER5B DNA MER1_type 3 145 -33 230 318 56 9 chr17 16904732 16904839 -68533641 - MER5B DNA MER1_type -17 161 50 1327 246 58 78 chr17 16905897 16906294 -68532186 + MER82 DNA MER2_type 199 587 -66 2043 88 84 4 chr17 16906294 16906568 -68531912 + AluSp SINE Alu 1 296 -17 1327 246 58 78 chr17 16906568 16906634 -68531846 + MER82 DNA MER2_type 587 653 0 2296 120 3 0 chr17 16906718 16907019 -68531461 - AluSq SINE Alu -11 302 1 728 239 12 6 chr17 16907561 16907724 -68530756 + FRAM SINE Alu 1 164 -2 359 114 0 14 chr17 16908266 16908336 -68530144 + L1PA16 LINE L1 6080 6148 -18 363 145 12 48 chr17 16909333 16909416 -68529064 + L1 LINE L1 5174 5253 -893 1929 107 40 20 chr17 16909417 16909554 -68528926 + AluSq SINE Alu 1 134 -179 2300 110 0 0 chr17 16909554 16909853 -68528627 + AluSc SINE Alu 1 299 -10 1929 107 40 20 chr17 16909853 16910015 -68528465 + AluSq SINE Alu 134 306 -7 5632 226 38 52 chr17 16910024 16911165 -68527315 + L1MB7 LINE L1 2425 3580 -2566 2415 95 7 0 chr17 16911165 16911469 -68527011 + AluSp SINE Alu 1 306 -7 5632 226 38 52 chr17 16911469 16911838 -68526642 + L1MB7 LINE L1 3580 3908 -2238 2391 99 0 6 chr17 16911838 16912150 -68526330 + AluY SINE Alu 1 310 -1 5632 226 38 52 chr17 16912150 16912492 -68525988 + L1MB7 LINE L1 3908 4253 -1893 1306 207 48 40 chr17 16912490 16912843 -68525637 + L1MB7 LINE L1 4879 5234 -912 * 3946 178 65 48 chr17 16913153 16914074 -68524406 + L1MB7 LINE L1 5256 6174 -10 514 171 143 0 chr17 16914814 16914919 -68523561 + MER103 DNA DNA 1 120 -46 380 269 40 62 chr17 16915618 16915845 -68522635 + L2 LINE L2 2882 3103 -169 580 281 52 13 chr17 16915851 16916082 -68522398 + MIR SINE MIR 7 246 -16 23 33 0 0 chr17 16916473 16916503 -68521977 + AT_rich Low_complexity Low_complexity 1 30 0 2433 62 3 20 chr17 16916625 16916929 -68521551 + AluY SINE Alu 1 299 -12 330 279 77 48 chr17 16916932 16917140 -68521340 + L1M4 LINE L1 3723 3936 -2210 2508 71 3 6 chr17 16917191 16917502 -68520978 + AluSp SINE Alu 1 310 -3 2404 91 0 0 chr17 16917512 16917809 -68520671 + AluSq SINE Alu 1 297 -16 308 314 57 19 chr17 16917814 16918024 -68520456 + L1M4 LINE L1 3208 3425 -2721 1219 140 36 5 chr17 16918026 16918219 -68520261 + AluSx SINE Alu 1 199 -113 691 98 62 18 chr17 16918219 16918410 -68520070 + AluSx SINE Alu 67 307 -3 579 277 69 52 chr17 16918427 16918893 -68519587 + L1M4 LINE L1 3441 3914 -2232 2270 178 60 7 chr17 16920348 16920935 -68517545 - L1PB4 LINE L1 0 6161 5514 938 221 10 0 chr17 16920922 16921126 -68517354 - L1PB4 LINE L1 -1067 5079 4874 * 546 270 52 37 chr17 16921142 16921412 -68517068 - L1MCa LINE L1 -1983 4443 4170 22 0 0 0 chr17 16922821 16922843 -68515637 + AT_rich Low_complexity Low_complexity 1 22 0 1260 57 0 40 chr17 16923132 16923309 -68515171 - L1PB1 LINE L1 0 6151 5982 1745 230 82 37 chr17 16924157 16925015 -68513465 - L1MCa LINE L1 -3223 3203 2316 816 261 13 42 chr17 16925025 16925225 -68513255 - L1MA10 LINE L1 -14 6320 6116 273 75 0 0 chr17 16925225 16925265 -68513215 + (TTTTG)n Simple_repeat Simple_repeat 2 41 0 2091 118 0 4 chr17 16925267 16925546 -68512934 - AluSc SINE Alu -31 278 1 816 261 13 42 chr17 16925546 16925649 -68512831 - L1MA10 LINE L1 -219 6115 6023 295 169 68 0 chr17 16925663 16925722 -68512758 - L1MA9 LINE L1 0 6312 6250 727 239 49 51 chr17 16925735 16926058 -68512422 - L1M4 LINE L1 -3849 2533 2209 2376 110 0 0 chr17 16926058 16926367 -68512113 - AluSg1 SINE Alu 0 309 1 727 239 49 51 chr17 16926367 16926476 -68512004 - L1M4 LINE L1 -4173 2209 2101 2290 109 0 0 chr17 16926482 16926775 -68511705 + AluSp SINE Alu 1 293 -20 345 47 0 0 chr17 16926776 16926809 -68511671 + (TG)n Simple_repeat Simple_repeat 1 76 0 345 47 0 0 chr17 16926809 16926852 -68511628 + (TG)n Simple_repeat Simple_repeat 2 44 0 272 244 51 0 chr17 16926970 16927048 -68511432 + MIR3 SINE MIR 83 164 -44 252 276 26 0 chr17 16927060 16927136 -68511344 + MER116 DNA Mariner 2 79 -1 1461 108 0 0 chr17 16927479 16927664 -68510816 - AluSq SINE Alu -128 185 1 2337 97 0 0 chr17 16929722 16930011 -68508469 + AluSc SINE Alu 1 289 -20 208 323 15 0 chr17 16930964 16931029 -68507451 + L2 LINE L2 3187 3252 -20 189 107 0 0 chr17 16931118 16931146 -68507334 + (GAAA)n Simple_repeat Simple_repeat 3 30 0 2415 87 0 3 chr17 16931149 16931448 -68507032 + AluY SINE Alu 1 298 -13 2554 61 0 0 chr17 16931448 16931743 -68506737 + AluY SINE Alu 1 296 -15 2128 127 23 7 chr17 16932119 16932426 -68506054 + AluSx SINE Alu 1 312 0 681 114 0 0 chr17 16932438 16932543 -68505937 + (GGAA)n Simple_repeat Simple_repeat 4 108 0 189 121 0 0 chr17 16932546 16932579 -68505901 + (CAAAG)n Simple_repeat Simple_repeat 3 35 0 2504 48 7 0 chr17 16933200 16933495 -68504985 - AluY SINE Alu -14 297 1 2311 75 14 0 chr17 16933506 16933801 -68504679 - AluY SINE Alu -10 301 3 3316 38 15 0 chr17 16933852 16934250 -68504230 - L1PA7 LINE L1 0 6154 5751 377 312 110 41 chr17 16934361 16935023 -68503457 + L2 LINE L2 2317 3056 -257 332 277 18 0 chr17 16935331 16935443 -68503037 + L2 LINE L2 3154 3267 -5 203 176 59 39 chr17 16936442 16936493 -68501987 + MER5A DNA MER1_type 1 52 -137 2835 32 0 0 chr17 16937116 16937427 -68501053 - AluY SINE Alu 0 311 1 1068 135 0 0 chr17 16937427 16937574 -68500906 - AluSc SINE Alu -15 294 145 2481 77 0 0 chr17 16937586 16937897 -68500583 - AluY SINE Alu 0 311 1 2221 79 3 61 chr17 16937967 16938297 -68500183 + AluY SINE Alu 1 311 0 2452 93 0 0 chr17 16938319 16938629 -68499851 + AluSg SINE Alu 1 310 0 19961 47 6 2 chr17 16939052 16942297 -68496183 + L1PA5 LINE L1 2933 6154 0 2081 98 14 3 chr17 16942574 16942871 -68495609 + AluSc SINE Alu 1 300 -9 216 0 0 0 chr17 16943062 16943086 -68495394 + (TA)n Simple_repeat Simple_repeat 2 25 0 1470 171 3 51 chr17 16943358 16943651 -68494829 + AluJb SINE Alu 1 279 -33 796 170 55 83 chr17 16943745 16943963 -68494517 - L1MA8 LINE L1 -25 6266 6055 2629 47 0 0 chr17 16944179 16944480 -68494000 - AluY SINE Alu -10 301 1 676 268 84 41 chr17 16945042 16945481 -68492999 + L1ME3A LINE L1 2681 3100 -3046 2663 43 0 3 chr17 16945481 16945786 -68492694 + AluY SINE Alu 1 304 -7 676 268 84 41 chr17 16945786 16945936 -68492544 + L1ME3A LINE L1 3100 5093 -1053 198 0 0 0 chr17 16945936 16945958 -68492522 + (T)n Simple_repeat Simple_repeat 1 22 0 284 91 0 0 chr17 16948826 16948870 -68489610 - Alu SINE Alu 0 300 257 21 0 0 0 chr17 16949317 16949338 -68489142 + AT_rich Low_complexity Low_complexity 1 21 0 23 68 0 0 chr17 16951201 16951245 -68487235 + GC_rich Low_complexity Low_complexity 1 44 0 42 57 0 0 chr17 16951300 16951370 -68487110 + GC_rich Low_complexity Low_complexity 1 70 0 495 0 0 0 chr17 16951447 16951502 -68486978 + (TG)n Simple_repeat Simple_repeat 2 56 0 2363 79 0 10 chr17 16951763 16952067 -68486413 + AluY SINE Alu 1 301 -10 201 368 0 13 chr17 16954350 16954426 -68484054 - MIR SINE MIR -168 94 20 29 0 0 0 chr17 16954747 16954776 -68483704 + AT_rich Low_complexity Low_complexity 1 29 0 2103 92 11 7 chr17 16954778 16955059 -68483421 - AluSq SINE Alu -17 296 15 504 108 135 0 chr17 16955200 16955274 -68483206 - 5S rRNA rRNA -36 85 2 1416 237 98 24 chr17 16955277 16955779 -68482701 + L1ME3A LINE L1 5254 5792 -378 359 179 39 62 chr17 16955850 16956016 -68482464 + L1ME3A LINE L1 5773 5948 -214 2239 51 0 51 chr17 16956072 16956387 -68482093 + AluY SINE Alu 1 299 -12 422 299 73 20 chr17 16956428 16956632 -68481848 + L1ME3A LINE L1 5930 6144 -26 622 172 0 13 chr17 16956755 16956868 -68481612 + Tigger3(Golem) DNA MER2_type 11 109 -2920 2568 105 37 19 chr17 16956873 16957301 -68481179 + Tigger3(Golem) DNA MER2_type 2300 2735 -294 2005 144 42 33 chr17 16957301 16957662 -68480818 + THE1B LTR MaLR 1 364 0 10685 110 22 20 chr17 16957662 16958928 -68479552 + THE1B-int LTR MaLR 1 1273 -307 2474 73 0 7 chr17 16958928 16959229 -68479251 + AluY SINE Alu 13 311 0 10685 110 22 20 chr17 16959229 16959532 -68478948 + THE1B-int LTR MaLR 1273 1574 -6 2068 150 33 30 chr17 16959537 16959898 -68478582 + THE1B LTR MaLR 1 362 -2 1708 123 26 62 chr17 16959900 16960208 -68478272 + Tigger3(Golem) DNA MER2_type 2731 3027 -2 234 296 40 16 chr17 16960495 16960621 -68477859 + L1MC/D LINE L1 5692 5819 -302 27 22 0 22 chr17 16960849 16960861 -68477619 + AT_rich Low_complexity Low_complexity 1 12 -32 1575 189 0 26 chr17 16960861 16961163 -68477317 + AluSx SINE Alu 1 294 -18 27 22 0 22 chr17 16961163 16961195 -68477285 + AT_rich Low_complexity Low_complexity 12 44 0 1836 232 80 90 chr17 16961203 16961685 -68476795 + L1ME LINE L1 33 518 -5552 2296 158 44 7 chr17 16961685 16962096 -68476384 - MSTB LTR MaLR 0 426 1 1836 232 80 90 chr17 16962096 16962681 -68475799 + L1ME LINE L1 518 1089 -4981 753 222 71 45 chr17 16963097 16963427 -68475053 + L1ME LINE L1 794 1429 -4572 1208 288 59 31 chr17 16963549 16964095 -68474385 - L1ME3A LINE L1 -10 6160 5600 758 125 23 120 chr17 16964115 16964191 -68474289 + L1MA8 LINE L1 6028 6110 -181 2462 70 3 0 chr17 16964191 16964489 -68473991 + AluY SINE Alu 1 299 -12 758 125 23 120 chr17 16964489 16964567 -68473913 + L1MA8 LINE L1 6110 6158 -133 2080 113 41 3 chr17 16964567 16964860 -68473620 + AluSg SINE Alu 1 304 -6 758 125 23 120 chr17 16964860 16964920 -68473560 + L1MA8 LINE L1 6158 6222 -69 426 303 72 43 chr17 16965040 16965248 -68473232 - L1ME3A LINE L1 -589 5573 5360 1889 111 0 28 chr17 16965259 16965548 -68472932 + AluSq SINE Alu 5 285 -28 396 55 0 0 chr17 16965548 16965603 -68472877 + (CCAA)n Simple_repeat Simple_repeat 1 55 0 651 120 74 0 chr17 16965618 16965726 -68472754 + AluSp/q SINE Alu 174 289 -24 180 0 0 0 chr17 16965732 16965752 -68472728 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 1165 100 12 19 chr17 16965794 16965954 -68472526 - AluSc SINE Alu -19 290 132 2314 91 0 10 chr17 16965954 16966262 -68472218 - AluY SINE Alu -6 305 1 233 362 16 0 chr17 16969843 16969970 -68468510 + (TG)n Simple_repeat Simple_repeat 1 129 0 1477 206 54 12 chr17 16971215 16971550 -68466930 + MLT1A1 LTR MaLR 13 361 -4 897 260 34 24 chr17 16971559 16971855 -68466625 + MER89-int LTR ERV1 1361 1659 -5142 1537 212 0 22 chr17 16973784 16974100 -68464380 + AluJo SINE Alu 3 311 -1 1910 156 52 27 chr17 16974427 16974793 -68463687 - THE1C LTR MaLR 0 375 1 3999 133 20 15 chr17 16974793 16975453 -68463027 - THE1C-int LTR MaLR 0 1580 918 359 226 97 86 chr17 16975941 16976127 -68462353 + L1 LINE L1 2975 3162 -2984 462 222 68 12 chr17 16976232 16976394 -68462086 + L1ME4a LINE L1 5950 6120 -1 207 68 23 45 chr17 16976455 16976499 -68461981 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 1389 48 0 4 chr17 16976584 16976794 -68461686 + AluY SINE Alu 1 300 -11 22 42 0 0 chr17 16977289 16977313 -68461167 + AT_rich Low_complexity Low_complexity 1 24 0 589 282 96 29 chr17 16977396 16977811 -68460669 + L1ME4a LINE L1 5457 5899 -222 1584 130 4 4 chr17 16977842 16978072 -68460408 - AluSq SINE Alu -16 297 68 330 276 74 84 chr17 16978102 16978305 -68460175 + L1ME3 LINE L1 5535 5735 -386 2306 99 3 6 chr17 16978915 16979229 -68459251 - AluSq SINE Alu 0 313 1 825 49 65 8 chr17 16979233 16979356 -68459124 - AluSc SINE Alu -3 306 177 1397 139 35 82 chr17 16979434 16979750 -68458730 - AluJo SINE Alu -7 305 5 463 223 280 0 chr17 16979784 16979959 -68458521 - L1ME3 LINE L1 -14 6148 5925 853 168 17 89 chr17 16979976 16980155 -68458325 + FRAM SINE Alu 1 166 0 338 209 22 137 chr17 16980171 16980237 -68458243 + L1ME3 LINE L1 5975 6018 -144 2001 121 46 4 chr17 16980237 16980518 -68457962 + AluSg SINE Alu 1 293 -17 338 209 22 137 chr17 16980518 16980590 -68457890 + L1ME3 LINE L1 6018 6097 -65 2385 97 10 0 chr17 16980636 16980945 -68457535 + AluSp SINE Alu 1 312 -1 2087 79 79 0 chr17 16981073 16981352 -68457128 + AluSq SINE Alu 1 301 -12 2193 120 0 10 chr17 16981354 16981662 -68456818 + AluSx SINE Alu 1 305 -7 820 229 29 12 chr17 16981891 16982131 -68456349 + L1M4 LINE L1 4615 4858 -1288 2290 92 3 0 chr17 16982131 16982443 -68456037 - AluSp SINE Alu 0 314 2 2087 139 10 0 chr17 16982453 16982762 -68455718 - AluSx SINE Alu 0 312 1 2431 89 7 0 chr17 16982816 16983119 -68455361 - AluSq SINE Alu -8 305 1 209 206 191 15 chr17 16983519 16983587 -68454893 + L2 LINE L2 3229 3308 -5 1955 140 0 14 chr17 16983670 16983988 -68454492 - AluSx SINE Alu 0 314 1 2267 109 7 0 chr17 16984029 16984323 -68454157 - AluSq SINE Alu -17 296 1 1308 181 47 43 chr17 16984440 16984717 -68453763 - AluJo SINE Alu -21 291 14 1756 147 73 0 chr17 16984717 16984989 -68453491 - AluSx SINE Alu -14 298 7 2206 119 0 0 chr17 16985003 16985323 -68453157 - AluSg SINE Alu 0 320 1 913 136 0 0 chr17 16985702 16985827 -68452653 - FRAM SINE Alu -14 162 38 1209 126 0 0 chr17 16985985 16986152 -68452328 + AluSq SINE Alu 132 298 -15 1090 121 73 47 chr17 16986165 16986238 -68452242 + L1MB4 LINE L1 5943 6013 -167 2261 99 3 0 chr17 16986238 16986546 -68451934 - AluSp SINE Alu 0 309 1 1090 121 73 47 chr17 16986546 16986703 -68451777 + L1MB4 LINE L1 6013 6180 0 1021 154 41 18 chr17 16986842 16986919 -68451561 + L1MB3 LINE L1 5930 6004 -179 2069 136 0 7 chr17 16986919 16987228 -68451252 - AluSx SINE Alu -5 307 1 1021 154 41 18 chr17 16987228 16987370 -68451110 + L1MB3 LINE L1 6004 6154 -29 2163 132 0 10 chr17 16987381 16987692 -68450788 - AluSx SINE Alu 0 312 5 1714 174 28 0 chr17 16987739 16988021 -68450459 - AluJb SINE Alu -22 290 1 2272 96 7 0 chr17 16988024 16988316 -68450164 - AluSp SINE Alu -19 294 1 202 256 209 0 chr17 16989065 16989151 -68449329 - MER91A DNA MER1_type 0 196 93 2865 124 28 6 chr17 16989165 16989631 -68448849 - MER31A LTR ERV1 -9 476 1 617 237 83 18 chr17 16989694 16989863 -68448617 - MIR SINE MIR -19 243 64 1151 123 0 0 chr17 16990215 16990369 -68448111 - AluSg/x SINE Alu -24 286 133 298 0 0 45 chr17 16990371 16990415 -68448065 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 1978 120 0 31 chr17 16990415 16990706 -68447774 - AluSx SINE Alu -30 282 1 379 270 128 11 chr17 16990706 16990971 -68447509 - L1ME3 LINE L1 -222 5948 5646 1791 171 0 31 chr17 16990992 16991314 -68447166 + AluJb SINE Alu 1 312 0 2099 104 61 0 chr17 16991594 16991873 -68446607 + AluSg SINE Alu 1 296 -14 1507 203 11 7 chr17 16991905 16992186 -68446294 - AluJo SINE Alu -30 282 1 512 241 129 0 chr17 16992278 16992448 -68446032 - L1ME3 LINE L1 -504 5660 5469 675 222 24 8 chr17 16992453 16992579 -68445901 - FLAM_C SINE Alu -4 129 2 2103 120 10 0 chr17 16992647 16992946 -68445534 - AluSx SINE Alu -10 302 1 386 165 0 25 chr17 16992949 16993028 -68445452 - L1ME3 LINE L1 -1448 4698 4622 1541 213 10 19 chr17 16993039 16993349 -68445131 + AluJo SINE Alu 1 307 -5 2191 117 7 0 chr17 16993352 16993651 -68444829 + AluSp SINE Alu 1 301 -12 870 97 0 0 chr17 16993661 16993774 -68444706 + AluSx SINE Alu 1 113 -200 1608 70 35 9 chr17 16993774 16994004 -68444476 + MLT2A1 LTR ERVL 1 236 -208 1369 138 10 0 chr17 16994004 16994207 -68444273 - AluSg/x SINE Alu -14 298 94 1274 111 16 3 chr17 16994324 16994519 -68443961 + MLT2A1 LTR ERVL 216 475 -40 322 96 0 19 chr17 16994555 16994607 -68443873 + MLT2A2 LTR ERVL 403 453 0 1392 103 16 0 chr17 16994607 16994791 -68443689 + AluSx SINE Alu 109 295 -17 30 27 0 0 chr17 16994814 16994851 -68443629 + AT_rich Low_complexity Low_complexity 1 37 0 1196 238 28 35 chr17 16994958 16995130 -68443350 - L1ME1 LINE L1 -5 6161 5990 313 294 43 47 chr17 16995130 16995362 -68443118 - L1MA5 LINE L1 -296 6004 5773 2447 95 0 0 chr17 16995362 16995668 -68442812 - AluSc SINE Alu 0 309 4 192 40 0 0 chr17 16995670 16995695 -68442785 + (TTA)n Simple_repeat Simple_repeat 2 26 0 2142 134 0 0 chr17 16995695 16995978 -68442502 - AluSx SINE Alu -29 283 1 313 294 43 47 chr17 16995978 16995996 -68442484 - L1MA5 LINE L1 -526 5774 5751 29 28 0 0 chr17 16996194 16996230 -68442250 + AT_rich Low_complexity Low_complexity 1 36 0 2446 96 0 3 chr17 16996277 16996590 -68441890 + AluSx SINE Alu 1 312 0 197 349 93 8 chr17 16996697 16996826 -68441654 + L2 LINE L2 2594 2733 -581 720 280 85 78 chr17 16996884 16996909 -68441571 - L2 LINE L2 -1 3312 3289 1790 159 32 38 chr17 16996909 16997223 -68441257 + AluJb SINE Alu 1 312 0 720 280 85 78 chr17 16997223 16997401 -68441079 - L2 LINE L2 -24 3289 3114 2363 65 0 26 chr17 16997401 16997707 -68440773 - AluY SINE Alu -13 298 1 1533 164 13 80 chr17 16997709 16998021 -68440459 - AluSg SINE Alu -19 291 1 720 280 85 78 chr17 16998021 16998273 -68440207 - L2 LINE L2 -199 3114 2850 316 222 192 0 chr17 16998566 16998665 -68439815 - MIR SINE MIR -4 258 141 2129 117 0 7 chr17 16998678 16998986 -68439494 + AluSx SINE Alu 12 317 0 250 217 50 0 chr17 16998992 16999052 -68439428 - MIR SINE MIR -59 203 141 191 281 169 11 chr17 16999091 16999180 -68439300 + L2 LINE L2 3170 3272 0 364 304 0 20 chr17 16999385 16999487 -68438993 + L1MC4 LINE L1 6604 6703 -1339 1955 126 4 4 chr17 16999548 16999819 -68438661 - AluSx SINE Alu -38 274 4 1524 155 4 9 chr17 16999848 17000080 -68438400 - AluJb SINE Alu -81 231 1 183 302 0 0 chr17 17000283 17000326 -68438154 - MIR3 SINE MIR -47 161 119 1386 133 15 41 chr17 17000327 17000345 -68438135 + L1MB2 LINE L1 5812 5829 -342 2125 117 3 38 chr17 17000345 17000661 -68437819 + AluSg SINE Alu 1 305 -5 1386 133 15 41 chr17 17000661 17000724 -68437756 + L1MB2 LINE L1 5829 5892 -279 1882 163 3 13 chr17 17000724 17001031 -68437449 + AluJb SINE Alu 3 306 -6 1386 133 15 41 chr17 17001031 17001219 -68437261 + L1MB2 LINE L1 5892 6075 -96 2373 56 0 11 chr17 17001220 17001535 -68436945 + AluY SINE Alu 1 312 0 2202 94 9 41 chr17 17001536 17001855 -68436625 - AluSq SINE Alu -4 309 1 825 194 50 22 chr17 17001950 17002130 -68436350 + AluJo SINE Alu 127 311 -1 2134 133 0 0 chr17 17002154 17002448 -68436032 - AluSx SINE Alu -10 302 9 241 216 118 0 chr17 17002939 17002990 -68435490 - L2 LINE L2 -1 3271 3215 1464 164 52 14 chr17 17004136 17004269 -68434211 + AluJo SINE Alu 2 128 -184 2238 111 3 3 chr17 17004269 17004575 -68433905 + AluSx SINE Alu 1 306 -6 1464 164 52 14 chr17 17004575 17004727 -68433753 + AluJo SINE Alu 128 298 -14 2272 93 3 7 chr17 17004752 17005053 -68433427 - AluSg1 SINE Alu -9 300 1 835 50 0 10 chr17 17005160 17005260 -68433220 + AluSq/x SINE Alu 35 133 -180 1881 94 4 0 chr17 17007507 17007752 -68430728 + AluSc SINE Alu 39 284 -25 434 198 81 0 chr17 17007767 17007853 -68430627 - FRAM SINE Alu -25 151 59 1903 116 54 0 chr17 17008255 17008531 -68429949 - AluSx SINE Alu -21 291 1 824 187 166 6 chr17 17009092 17009483 -68428997 + MER21B LTR ERV1 20 492 -371 576 164 90 8 chr17 17009484 17009606 -68428874 + AluJb SINE Alu 2 133 -179 1208 179 56 96 chr17 17009615 17009917 -68428563 + AluSx SINE Alu 5 294 -8 22 0 0 0 chr17 17010030 17010052 -68428428 + AT_rich Low_complexity Low_complexity 1 22 0 847 166 90 0 chr17 17010052 17010197 -68428283 - FRAM SINE Alu -23 153 1 2319 84 7 3 chr17 17010217 17010526 -68427954 - AluSx SINE Alu -2 310 1 2308 91 0 3 chr17 17010526 17010823 -68427657 - AluY SINE Alu -14 297 2 802 158 8 8 chr17 17010863 17010996 -68427484 + AluJo SINE Alu 3 135 -177 435 59 0 0 chr17 17010996 17011047 -68427433 + AluSp/q SINE Alu 200 250 -63 1243 148 0 48 chr17 17011047 17011277 -68427203 + AluJo SINE Alu 85 303 -9 313 145 0 66 chr17 17011559 17011635 -68426845 + AluJ/FRAM SINE Alu 231 301 -1 2195 28 0 0 chr17 17011654 17011903 -68426577 + AluY SINE Alu 1 249 -62 210 37 0 0 chr17 17012003 17012030 -68426450 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2491 84 0 7 chr17 17012041 17012351 -68426129 + AluSq SINE Alu 1 308 -5 291 183 0 0 chr17 17012564 17012624 -68425856 - L1ME4a LINE L1 -2 6119 6060 381 284 124 20 chr17 17012908 17012957 -68425523 - L1MB8 LINE L1 -237 5941 5893 823 239 57 17 chr17 17012957 17013254 -68425226 - L1MC4a LINE L1 -1946 5862 5554 285 44 44 0 chr17 17013249 17013294 -68425186 + L1M3 LINE L1 5783 5829 -351 * 2301 74 14 14 chr17 17013337 17013633 -68424847 + AluSc SINE Alu 3 298 -11 2265 113 0 7 chr17 17013635 17013935 -68424545 + AluSx SINE Alu 2 299 -13 1135 82 6 31 chr17 17013935 17014094 -68424386 + AluSq SINE Alu 83 237 -76 929 196 12 6 chr17 17214106 17215631 -68222849 + ALR/Alpha Satellite centromeric 1 1534 -26 1131 156 6 0 chr17 17215733 17222385 -68216095 - ALR/Alpha Satellite centromeric 0 6692 1 1131 160 8 1 chr17 17222485 17238271 -68200209 - ALR/Alpha Satellite centromeric 0 15893 1 948 173 4 2 chr17 17238373 17241108 -68197372 - ALR/Alpha Satellite centromeric 0 2742 1 6824 64 11 41 chr17 17241128 17242838 -68195642 - SVA Other Other -683 1386 1 982 166 8 2 chr17 17242840 17244567 -68193913 - ALR/Alpha Satellite centromeric 0 1738 1 1019 168 5 2 chr17 17244669 17252685 -68185795 - ALR/Alpha Satellite centromeric 0 8045 1 917 173 2 3 chr17 17252696 17253529 -68184951 - ALR/Alpha Satellite centromeric -2 832 1 14864 46 7 1 chr17 17253529 17256159 -68182321 + L1PA4 LINE L1 3511 6146 -9 230 243 35 14 chr17 17256159 17256303 -68182177 + (TTATA)n Simple_repeat Simple_repeat 4 150 0 1077 161 3 1 chr17 17257146 17260464 -68178016 - ALR/Alpha Satellite centromeric 0 3324 1 826 196 2 16 chr17 17260568 17261591 -68176889 - ALR/Alpha Satellite centromeric -1 1008 1 10730 34 0 0 chr17 17261591 17262959 -68175521 - L1P LINE L1 -1875 4271 2904 364 220 164 13 chr17 17263673 17263832 -68174648 + L1MC4 LINE L1 7444 7626 -416 1101 159 9 4 chr17 17263832 17264221 -68174259 - ALR/Alpha Satellite centromeric -6 390 1 936 283 158 18 chr17 17264345 17264953 -68173527 - L2 LINE L2 -2027 1287 595 2038 184 32 117 chr17 17265016 17265614 -68172866 - MER7C DNA MER2_type -55 547 1 332 268 143 62 chr17 17265624 17265896 -68172584 - L2 LINE L2 -2802 512 219 547 117 0 0 chr17 17266317 17266394 -68172086 - AluSc SINE Alu -12 297 221 353 293 16 16 chr17 17266878 17267001 -68171479 - L2 LINE L2 -55 3258 3136 701 216 8 0 chr17 17267004 17267129 -68171351 + FLAM_C SINE Alu 5 130 -13 289 249 147 102 chr17 17267313 17267490 -68170990 + MER5A DNA MER1_type 3 187 -2 386 258 23 23 chr17 17267566 17267698 -68170782 + L2 LINE L2 2927 3058 -214 311 305 12 10 chr17 17268034 17268154 -68170326 + MIR SINE MIR 33 152 -65 25 31 0 0 chr17 17269249 17269281 -68169199 + AT_rich Low_complexity Low_complexity 1 32 0 310 229 184 87 chr17 17269614 17269832 -68168648 - MLT1L LTR MaLR -225 390 152 404 323 39 8 chr17 17270019 17270149 -68168331 - L2 LINE L2 -2 3270 3137 397 306 6 12 chr17 17270286 17270446 -68168034 - L1ME LINE L1 -324 5797 5639 493 303 0 0 chr17 17270454 17270576 -68167904 + FLAM_A SINE Alu 2 123 -10 279 244 0 0 chr17 17270628 17270743 -68167737 + (CAT)n Simple_repeat Simple_repeat 1 115 0 687 106 5 80 chr17 17270765 17270953 -68167527 + (CACCAT)n Simple_repeat Simple_repeat 6 179 0 570 229 0 0 chr17 17270963 17271142 -68167338 + (CAT)n Simple_repeat Simple_repeat 1 179 0 229 296 145 69 chr17 17271814 17272118 -68166362 + L2 LINE L2 2578 2904 -410 311 281 31 0 chr17 17273458 17273554 -68164926 - MIR SINE MIR -66 142 44 345 186 0 0 chr17 17273567 17273626 -68164854 + MIR SINE MIR 61 119 -89 375 241 146 63 chr17 17273746 17273904 -68164576 - MIR SINE MIR -63 145 12 444 219 0 0 chr17 17274328 17274451 -68164029 + (TGGA)n Simple_repeat Simple_repeat 3 125 0 574 245 94 43 chr17 17275322 17275555 -68162925 - MIR SINE MIR -1 261 17 567 226 39 32 chr17 17275558 17275713 -68162767 + MIR SINE MIR 8 163 -99 2100 101 3 14 chr17 17276342 17276669 -68161811 - AluY SINE Alu 0 311 1 231 201 394 50 chr17 17280505 17280784 -68157696 + L2 LINE L2 2361 2735 -579 1931 198 24 46 chr17 17281073 17281569 -68156911 - L1MA8 LINE L1 -25 6968 6484 317 234 80 7 chr17 17281736 17281873 -68156607 - L1MA8 LINE L1 -816 6032 5886 878 226 141 7 chr17 17281879 17282176 -68156304 - L1MA8 LINE L1 -1082 5766 5430 416 262 48 8 chr17 17282189 17282315 -68156165 - L1MA8 LINE L1 -4311 2538 2408 400 263 177 27 chr17 17282321 17282559 -68155921 - L1M3 LINE L1 -391 5771 5509 914 266 38 42 chr17 17282587 17283011 -68155469 - L1ME1 LINE L1 -4 6162 5741 * 1170 253 72 75 chr17 17283007 17283891 -68154589 - L1M3 LINE L1 -815 5331 4450 293 287 0 32 chr17 17283901 17283995 -68154485 - L1M3 LINE L1 -1796 4350 4260 640 345 36 33 chr17 17284054 17284510 -68153970 + L1MA8 LINE L1 1 1658 -5838 1910 281 35 27 chr17 17284595 17285616 -68152864 + L1MA8 LINE L1 2213 3255 -4311 1611 247 57 14 chr17 17285629 17286213 -68152267 + L1MA8 LINE L1 6147 6755 -810 1925 197 8 50 chr17 17286369 17286871 -68151609 + L1MA8 LINE L1 7195 7675 -35 296 191 407 33 chr17 17287169 17287442 -68151038 - L2 LINE L2 -579 2735 2361 250 287 93 28 chr17 17287803 17287911 -68150569 + MIR SINE MIR 31 145 -63 382 315 35 35 chr17 17290079 17290368 -68148112 - SST1 Satellite centromeric -961 602 314 665 304 102 33 chr17 17291048 17291684 -68146796 - SST1 Satellite centromeric -847 716 37 1021 189 10 16 chr17 17291711 17292899 -68145581 + ALR/Alpha Satellite centromeric 1 1194 -1241 2179 105 3 13 chr17 17292899 17293212 -68145268 + AluSp SINE Alu 2 311 -2 1021 189 10 16 chr17 17293212 17294142 -68144338 + ALR/Alpha Satellite centromeric 1194 2417 -18 964 198 12 4 chr17 17294250 17295557 -68142923 + ALR/Alpha Satellite centromeric 1 1318 -83 1022 198 7 7 chr17 17295664 17301061 -68137419 + ALR/Alpha Satellite centromeric 1 5398 -1 740 222 12 33 chr17 17301164 17301663 -68136817 + ALR/Alpha Satellite centromeric 1 488 -10 976 194 8 9 chr17 17301678 17301732 -68136748 + ALR/Alpha Satellite centromeric 1 54 -4038 2314 100 0 0 chr17 17301732 17302032 -68136448 + AluY SINE Alu 2 301 -10 976 194 8 9 chr17 17302032 17305741 -68132739 + ALR/Alpha Satellite centromeric 54 4058 -34 1002 200 8 6 chr17 17305854 17309108 -68129372 + ALR/Alpha Satellite centromeric 1 3261 0 976 198 0 0 chr17 17309122 17309422 -68129058 + ALR/Alpha Satellite centromeric 1 300 -31 294 98 0 0 chr17 17310053 17310104 -68128376 + (CA)n Simple_repeat Simple_repeat 2 52 0 571 291 110 71 chr17 17310152 17311504 -68126976 - SST1 Satellite centromeric -27 1536 132 257 293 64 13 chr17 17312661 17312818 -68125662 - SST1 Satellite centromeric -9 1554 1390 432 304 99 38 chr17 17313008 17313594 -68124886 - SST1 Satellite centromeric -810 753 132 917 198 3 8 chr17 17313704 17315142 -68123338 + ALR/Alpha Satellite centromeric 1 1430 -48 874 202 9 12 chr17 17315280 17320413 -68118067 + ALR/Alpha Satellite centromeric 1 5418 -515 2403 92 0 3 chr17 17320413 17320717 -68117763 + AluY SINE Alu 1 303 -8 874 202 9 12 chr17 17320717 17321182 -68117298 + ALR/Alpha Satellite centromeric 5418 5883 -50 24 0 0 0 chr17 17373731 17373755 -68064725 + AT_rich Low_complexity Low_complexity 1 24 0 222 62 0 0 chr17 17374726 17374758 -68063722 + (TAAA)n Simple_repeat Simple_repeat 3 34 0 831 192 0 7 chr17 17374911 17375057 -68063423 + FRAM SINE Alu 2 146 -30 223 216 119 172 chr17 17375067 17375201 -68063279 + MER5B DNA MER1_type 50 176 -2 319 274 65 32 chr17 17375348 17375472 -68063008 + L1MB1 LINE L1 4966 5093 -1053 22 94 0 0 chr17 17375490 17375554 -68062926 + AT_rich Low_complexity Low_complexity 1 64 0 4026 180 54 18 chr17 17375570 17376231 -68062249 + L1MB1 LINE L1 5266 5967 -201 2399 63 7 3 chr17 17376231 17376532 -68061948 + AluY SINE Alu 1 302 -9 4026 180 54 18 chr17 17376532 17376742 -68061738 + L1MB1 LINE L1 5967 6168 0 511 292 29 0 chr17 17376739 17377033 -68061447 + L1ME3 LINE L1 5191 5493 -669 * 763 134 0 17 chr17 17377034 17377153 -68061327 + FRAM SINE Alu 41 157 -19 1430 271 45 37 chr17 17377171 17377817 -68060663 + L1ME3 LINE L1 5495 6145 -17 387 234 201 33 chr17 17377858 17378042 -68060438 + L2 LINE L2 2522 2736 -578 740 208 19 16 chr17 17378166 17378625 -68059855 + ALR/Alpha Satellite centromeric 1 460 -18 929 191 0 0 chr17 17378668 17378825 -68059655 + AluJb SINE Alu 137 293 -19 2016 133 0 3 chr17 17378828 17379146 -68059334 + AluY SINE Alu 1 317 0 4668 176 34 10 chr17 17379151 17380091 -68058389 - L1MC2 LINE L1 -21 6323 5361 283 280 96 57 chr17 17380605 17380762 -68057718 - MIR SINE MIR -88 174 12 2003 142 3 3 chr17 17381411 17381714 -68056766 - AluSg SINE Alu -7 303 1 2158 99 3 0 chr17 17382049 17382369 -68056111 - AluSp SINE Alu 0 321 1 390 293 49 62 chr17 17382960 17383185 -68055295 + MIR SINE MIR 41 262 0 21 57 0 0 chr17 17383223 17383258 -68055222 + AT_rich Low_complexity Low_complexity 1 35 0 2616 87 30 5 chr17 17383433 17383801 -68054679 - L1PA7 LINE L1 -14 6140 5764 1317 263 96 27 chr17 17384555 17384993 -68053487 + LTR40a LTR ERVL 1 468 -51 360 0 0 0 chr17 17385029 17385069 -68053411 + (TA)n Simple_repeat Simple_repeat 2 41 0 252 0 0 0 chr17 17385976 17386004 -68052476 + (TA)n Simple_repeat Simple_repeat 1 28 0 23 0 0 0 chr17 17386877 17386900 -68051580 + AT_rich Low_complexity Low_complexity 1 23 0 7568 26 0 0 chr17 17387015 17388477 -68050003 - L1PA2 LINE L1 0 6155 4690 * 19528 34 2 1 chr17 17388474 17391630 -68046850 + L1PA3 LINE L1 2994 6150 -5 867 230 126 44 chr17 17391850 17392167 -68046313 - MLT1A2 LTR MaLR -47 343 1 * 948 184 39 30 chr17 17392167 17392400 -68046080 + Charlie1b DNA MER1_type 97 331 -192 1720 260 69 57 chr17 17392418 17392521 -68045959 + L1M4 LINE L1 3154 3254 -2892 2043 133 7 0 chr17 17392521 17392815 -68045665 + AluSq SINE Alu 3 298 -15 1720 260 69 57 chr17 17392815 17393695 -68044785 + L1M4 LINE L1 3254 4149 -1997 572 226 151 14 chr17 17393708 17393728 -68044752 + L1M4 LINE L1 4349 4365 -1781 1310 202 10 46 chr17 17393728 17394030 -68044450 + AluJo SINE Alu 1 291 -11 572 226 151 14 chr17 17394030 17394221 -68044259 + L1M4 LINE L1 4365 4589 -1557 473 254 65 82 chr17 17395072 17395704 -68042776 + HSREP522 Satellite telomeric 1 621 -388 217 303 16 16 chr17 17396904 17397026 -68041454 + CT-rich Low_complexity Low_complexity 2 123 0 847 108 69 0 chr17 17397186 17397316 -68041164 - MER85 DNA T2_type 0 139 1 1145 205 29 36 chr17 17398346 17398624 -68039856 + LOR1-int LTR ERV1 2079 2354 -3592 876 129 75 20 chr17 17398623 17398824 -68039656 + LOR1-int LTR ERV1 1839 2050 -6070 * 2133 184 61 4 chr17 17398833 17399306 -68039174 + LOR1-int LTR ERV1 2731 3230 -2716 1662 222 13 33 chr17 17400186 17400646 -68037834 + L1MB8 LINE L1 4132 4582 -1564 2120 205 45 53 chr17 17400646 17401349 -68037131 + L1MB8 LINE L1 4852 6178 0 2560 121 27 20 chr17 17401393 17401841 -68036639 - L1PB1 LINE L1 -3 6148 5698 33 25 0 0 chr17 17402097 17402137 -68036343 + AT_rich Low_complexity Low_complexity 1 40 0 738 211 0 32 chr17 17402946 17403102 -68035378 + MLT2B3 LTR ERVL 384 534 -20 333 147 0 67 chr17 17403106 17403132 -68035348 + Ricksha DNA DNA 840 866 -2380 279 0 0 0 chr17 17403132 17403163 -68035317 + (CA)n Simple_repeat Simple_repeat 2 32 0 333 147 0 67 chr17 17403163 17403211 -68035269 + Ricksha DNA DNA 866 909 -2337 959 247 121 53 chr17 17403515 17403895 -68034585 + MLT2B1 LTR ERVL 113 518 -2 24 67 0 0 chr17 17404705 17404750 -68033730 + AT_rich Low_complexity Low_complexity 1 45 0 473 296 30 56 chr17 17404860 17405093 -68033387 + MLT1E LTR MaLR 30 256 -337 505 180 20 20 chr17 17405156 17405256 -68033224 + MLT1E1 LTR MaLR 504 603 -51 25 31 0 0 chr17 17405286 17405318 -68033162 + AT_rich Low_complexity Low_complexity 1 32 0 1385 209 20 26 chr17 17405727 17406033 -68032447 + AluJo SINE Alu 1 304 -8 2048 115 11 0 chr17 17406194 17406504 -68031976 + AluSg SINE Alu 1 313 0 23 0 0 0 chr17 17407213 17407236 -68031244 + AT_rich Low_complexity Low_complexity 1 23 0 368 265 87 39 chr17 17408413 17408645 -68029835 - LTR33A LTR ERVL -176 347 66 21 0 0 0 chr17 17409121 17409142 -68029338 + AT_rich Low_complexity Low_complexity 1 21 0 7550 26 0 1 chr17 17409142 17410713 -68027767 - L1PA3 LINE L1 -8 6147 4579 11764 34 1 1 chr17 17410713 17412139 -68026341 + L1PA3 LINE L1 3177 4602 -1544 376 190 10 20 chr17 17413733 17413833 -68024647 + CT-rich Low_complexity Low_complexity 1 99 0 714 161 42 0 chr17 17417552 17417670 -68020810 + FLAM_C SINE Alu 1 123 -20 650 64 56 36 chr17 17417672 17418024 -68020456 + (TA)n Simple_repeat Simple_repeat 1 358 0 1583 123 16 118 chr17 17418227 17418600 -68019880 - MER1B DNA MER1_type 0 337 3 29 0 0 0 chr17 17419044 17419073 -68019407 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr17 17419127 17419155 -68019325 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr17 17419178 17419207 -68019273 + AT_rich Low_complexity Low_complexity 1 29 0 24 0 0 0 chr17 17420063 17420087 -68018393 + AT_rich Low_complexity Low_complexity 1 24 0 23 0 0 0 chr17 17420246 17420269 -68018211 + AT_rich Low_complexity Low_complexity 1 23 0 253 318 65 55 chr17 17420318 17420535 -68017945 - MIR SINE MIR -26 236 18 323 310 184 0 chr17 17421206 17421364 -68017116 + MIR SINE MIR 48 234 -28 223 288 14 27 chr17 17422939 17423085 -68015395 + (TTATA)n Simple_repeat Simple_repeat 3 146 0 389 156 0 0 chr17 17423086 17423150 -68015330 - MLT2B2 LTR ERVL -451 64 1 243 0 0 0 chr17 17423364 17423391 -68015089 + (T)n Simple_repeat Simple_repeat 1 27 0 240 377 8 8 chr17 17423745 17423867 -68014613 + Charlie8 DNA MER1_type 126 247 -2170 1138 188 17 77 chr17 17424023 17424310 -68014170 - AluJo SINE Alu -32 280 11 2175 74 40 10 chr17 17424763 17425060 -68013420 - AluYa5 SINE Alu -5 306 1 2230 79 3 0 chr17 17426061 17426352 -68012128 - AluY SINE Alu -1 310 19 698 64 0 0 chr17 17427082 17427176 -68011304 + AluY SINE Alu 217 310 -1 4000 175 12 33 chr17 17427880 17428726 -68009754 - L1MA7 LINE L1 -5 6286 5459 609 195 132 42 chr17 17428834 17429024 -68009456 - L1MA7 LINE L1 -933 5213 5007 223 217 0 0 chr17 17429042 17429088 -68009392 + L3 LINE CR1 1530 1575 -2 24 0 0 0 chr17 17431783 17431807 -68006673 + AT_rich Low_complexity Low_complexity 1 24 0 30 69 0 0 chr17 17431909 17431967 -68006513 + AT_rich Low_complexity Low_complexity 1 58 0 21 0 0 0 chr17 17438853 17438874 -67999606 + AT_rich Low_complexity Low_complexity 1 21 0 7212 51 0 0 chr17 17441432 17442331 -67996149 - L1P LINE L1 -1111 5035 4137 488 291 55 25 chr17 17442332 17442531 -67995949 + L2 LINE L2 3109 3313 0 219 260 14 0 chr17 17442848 17442921 -67995559 + T-rich Low_complexity Low_complexity 2 75 0 21 0 0 0 chr17 17443139 17443160 -67995320 + AT_rich Low_complexity Low_complexity 1 21 0 1966 202 53 29 chr17 17443867 17444424 -67994056 + L1MB4 LINE L1 5710 6171 -9 357 125 0 0 chr17 17444427 17444483 -67993997 + (CA)n Simple_repeat Simple_repeat 2 57 0 270 225 56 0 chr17 17444484 17444573 -67993907 + (TA)n Simple_repeat Simple_repeat 2 95 0 308 200 0 105 chr17 17444583 17444678 -67993802 - MLT1C LTR MaLR -330 137 53 7595 30 0 0 chr17 17444874 17445905 -67992575 + L1PA3 LINE L1 5118 6155 0 234 188 0 0 chr17 17445916 17445964 -67992516 + A-rich Low_complexity Low_complexity 1 48 0 1440 239 68 14 chr17 17446350 17446522 -67991958 - MLT1A2 LTR MaLR -4 370 209 366 42 0 0 chr17 17446522 17446570 -67991910 + (GA)n Simple_repeat Simple_repeat 2 49 0 1440 239 68 14 chr17 17446570 17446748 -67991732 - MLT1A2 LTR MaLR -165 209 1 848 253 150 22 chr17 17446986 17447046 -67991434 - MLT1C LTR MaLR -3 464 413 258 32 0 0 chr17 17447046 17447077 -67991403 + (TAA)n Simple_repeat Simple_repeat 2 32 0 848 253 150 22 chr17 17447077 17447383 -67991097 - MLT1C LTR MaLR -54 413 51 22 70 0 0 chr17 17448284 17448327 -67990153 + AT_rich Low_complexity Low_complexity 1 43 0 31 68 0 0 chr17 17449634 17449693 -67988787 + AT_rich Low_complexity Low_complexity 1 59 0 23 0 0 0 chr17 17449887 17449910 -67988570 + AT_rich Low_complexity Low_complexity 1 23 0 654 286 17 0 chr17 17449977 17450155 -67988325 + MIR SINE MIR 58 238 -24 29 47 0 0 chr17 17450157 17450200 -67988280 + AT_rich Low_complexity Low_complexity 1 43 0 21 36 0 0 chr17 17450266 17450294 -67988186 + AT_rich Low_complexity Low_complexity 1 28 0 266 210 0 32 chr17 17451216 17451278 -67987202 - L2 LINE L2 0 3313 3254 949 261 44 41 chr17 17451787 17452105 -67986375 + L1MCa LINE L1 7 325 -6101 907 278 20 12 chr17 17452109 17452451 -67986029 + L1MCa LINE L1 2566 2910 -3516 390 275 18 18 chr17 17452515 17452624 -67985856 + MER5B DNA MER1_type 64 172 -6 25 51 0 0 chr17 17452759 17452798 -67985682 + AT_rich Low_complexity Low_complexity 1 39 0 380 80 16 277 chr17 17452819 17453007 -67985473 + L1MA8 LINE L1 6010 6148 -143 21 57 0 0 chr17 17453765 17453800 -67984680 + AT_rich Low_complexity Low_complexity 1 35 0 2053 133 0 0 chr17 17454579 17454914 -67983566 + AluSq SINE Alu 1 313 0 21 36 0 0 chr17 17456426 17456454 -67982026 + AT_rich Low_complexity Low_complexity 1 28 0 681 293 43 34 chr17 17456968 17457320 -67981160 - L1ME1 LINE L1 -2 6164 5810 * 4046 217 62 13 chr17 17457319 17458595 -67979885 - L1MC2 LINE L1 -8 6336 4901 1427 271 73 44 chr17 17458616 17459432 -67979048 - L1ME1 LINE L1 -363 5803 4967 23 33 0 0 chr17 17459446 17459476 -67979004 + AT_rich Low_complexity Low_complexity 1 30 0 1557 75 4 18 chr17 17459917 17460144 -67978336 - L1PA6 LINE L1 -7 6147 5924 1967 93 14 4 chr17 17460753 17461060 -67977420 - AluY SINE Alu 0 310 1 24 77 0 0 chr17 17461195 17461247 -67977233 + AT_rich Low_complexity Low_complexity 1 52 0 272 203 0 0 chr17 17461445 17461509 -67976971 + L1MA2 LINE L1 6241 6304 0 2916 97 0 35 chr17 17461639 17462103 -67976377 - LTR7 LTR ERV1 -2 448 1 819 142 0 0 chr17 17462794 17462921 -67975559 - AluSg/x SINE Alu -18 292 166 2374 128 3 10 chr17 17463011 17463395 -67975085 - L1PA13 LINE L1 -6 6157 5777 217 228 33 11 chr17 17463474 17463566 -67974914 + (TAGA)n Simple_repeat Simple_repeat 2 95 0 235 250 11 11 chr17 17463585 17463673 -67974807 - L1MC4 LINE L1 -1340 6702 6615 457 214 0 16 chr17 17463683 17463865 -67974615 + (TA)n Simple_repeat Simple_repeat 1 179 0 180 27 81 0 chr17 17463887 17463924 -67974556 + (TCTA)n Simple_repeat Simple_repeat 4 43 0 1200 280 81 41 chr17 17463956 17464386 -67974094 + L1ME3A LINE L1 2292 2703 -3443 508 29 29 0 chr17 17464386 17464456 -67974024 + (TAGA)n Simple_repeat Simple_repeat 1 72 0 1200 280 81 41 chr17 17464456 17465195 -67973285 + L1ME3A LINE L1 2703 3508 -2638 560 277 100 59 chr17 17465272 17465901 -67972579 + L1ME3A LINE L1 4422 5076 -1070 1423 175 34 20 chr17 17466127 17466419 -67972061 + AluJb SINE Alu 1 296 -16 22 56 0 0 chr17 17466493 17466529 -67971951 + AT_rich Low_complexity Low_complexity 1 36 0 323 325 84 40 chr17 17466550 17466799 -67971681 + L1ME3A LINE L1 5417 5676 -494 221 200 0 36 chr17 17466799 17466854 -67971626 + (TATG)n Simple_repeat Simple_repeat 3 55 0 277 301 53 15 chr17 17466863 17466996 -67971484 + L1ME3A LINE L1 5657 5794 -376 310 316 92 31 chr17 17467036 17467232 -67971248 + L1ME3A LINE L1 5963 6170 0 444 322 62 5 chr17 17467274 17467482 -67970998 + MIR SINE MIR 32 251 -11 21 57 0 0 chr17 17467482 17467517 -67970963 + AT_rich Low_complexity Low_complexity 1 35 0 180 399 22 29 chr17 17467847 17467985 -67970495 - L2 LINE L2 -209 3063 2927 297 0 0 0 chr17 17468184 17468217 -67970263 + (CA)n Simple_repeat Simple_repeat 2 34 0 1259 256 55 39 chr17 17469248 17469760 -67968720 + L1ME3A LINE L1 5651 6170 0 1689 189 7 0 chr17 17469814 17470121 -67968359 + AluJb SINE Alu 4 312 0 251 106 21 21 chr17 17470262 17470309 -67968171 - HERVL LTR ERVL -3762 1892 1846 517 375 37 17 chr17 17470418 17470826 -67967654 - HERVL LTR ERVL -4011 1753 1338 224 333 0 12 chr17 17471542 17471623 -67966857 + L2 LINE L2 3234 3313 0 198 262 49 0 chr17 17471727 17471788 -67966692 - L2 LINE L2 -1497 1817 1754 421 66 16 0 chr17 17471860 17471921 -67966559 - L1MA9 LINE L1 -167 6145 6084 245 318 88 0 chr17 17474353 17474523 -67963957 + L1M4 LINE L1 3805 3989 -2157 1680 201 54 44 chr17 17475093 17475502 -67962978 + MSTC LTR MaLR 16 428 0 1015 368 49 76 chr17 17475989 17476383 -67962097 + L2 LINE L2 1345 1748 -1566 687 78 10 0 chr17 17476383 17476486 -67961994 - L1PA13 LINE L1 0 6163 6060 1015 368 49 76 chr17 17476486 17477144 -67961336 + L2 LINE L2 1748 2369 -945 1085 121 0 0 chr17 17477146 17477295 -67961185 - AluY SINE Alu -162 149 1 190 27 0 81 chr17 17478222 17478259 -67960221 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 750 231 160 53 chr17 17478713 17479050 -67959430 + MLT1A2 LTR MaLR 2 374 0 2133 97 10 0 chr17 17479422 17479710 -67958770 - AluSq SINE Alu -22 291 1 1286 176 81 18 chr17 17479809 17480081 -67958399 + MER7A DNA MER2_type 4 290 -56 1226 139 23 19 chr17 17480076 17480292 -67958188 + MER67C LTR ERV1 494 710 0 * 22 0 0 0 chr17 17480706 17480728 -67957752 + AT_rich Low_complexity Low_complexity 1 22 0 195 400 88 0 chr17 17481716 17481841 -67956639 + L2 LINE L2 3137 3272 0 265 177 42 21 chr17 17481845 17481941 -67956539 + (TA)n Simple_repeat Simple_repeat 2 99 0 207 69 0 0 chr17 17481944 17481973 -67956507 + (CA)n Simple_repeat Simple_repeat 2 30 0 2102 129 0 13 chr17 17482920 17483230 -67955250 - AluSx SINE Alu -6 306 1 30 27 0 0 chr17 17483238 17483275 -67955205 + AT_rich Low_complexity Low_complexity 1 37 0 237 358 30 15 chr17 17483340 17483474 -67955006 + L2 LINE L2 2231 2366 -948 572 227 17 160 chr17 17483524 17483762 -67954718 - MER20 DNA MER1_type -15 204 1 186 182 23 23 chr17 17484232 17484276 -67954204 + MIR SINE MIR 216 259 -3 22 56 0 0 chr17 17485214 17485250 -67953230 + AT_rich Low_complexity Low_complexity 1 36 0 301 295 0 0 chr17 17486448 17486509 -67951971 + MER45 DNA AcHobo 12 72 -1509 422 233 44 0 chr17 17486801 17486891 -67951589 + MER58B DNA MER1_type 245 338 -3 387 238 67 113 chr17 17487038 17487278 -67951202 + MLT1C LTR MaLR 8 236 -231 704 266 49 45 chr17 17487301 17487568 -67950912 + MLT1C LTR MaLR 192 459 -8 243 103 0 0 chr17 17488997 17489036 -67949444 + (TG)n Simple_repeat Simple_repeat 2 40 0 2322 70 3 19 chr17 17489659 17489972 -67948508 - AluY SINE Alu -3 308 1 734 86 138 0 chr17 17490390 17490506 -67947974 + MER39 LTR ERV1 1 132 -575 2091 132 81 51 chr17 17490506 17490915 -67947565 - MER4B LTR ERV1 -186 424 4 566 193 187 36 chr17 17490936 17491102 -67947378 + MER34C LTR ERV1 4 194 -391 3173 159 40 10 chr17 17491104 17491126 -67947354 + LTR49 LTR ERV1 1 21 -574 1693 170 43 32 chr17 17491126 17491497 -67946983 - THE1C LTR MaLR 0 375 1 3173 159 40 10 chr17 17491497 17492052 -67946428 + LTR49 LTR ERV1 21 595 0 266 220 127 17 chr17 17492101 17492219 -67946261 + LTR48 LTR ERV1 356 486 -301 318 219 101 17 chr17 17492251 17492370 -67946110 + LTR48 LTR ERV1 609 737 -50 1577 198 52 6 chr17 17492540 17492868 -67945612 + MER61A LTR ERV1 1 343 0 991 159 6 0 chr17 17492908 17493065 -67945415 + AluJo SINE Alu 12 169 -143 577 274 84 26 chr17 17493276 17493466 -67945014 - MER67D LTR ERV1 -8 506 306 1191 239 6 61 chr17 17493513 17493840 -67944640 - MER67D LTR ERV1 -203 311 3 3720 101 18 2 chr17 17493873 17494418 -67944062 + MER41A LTR ERV1 1 554 0 23 54 0 0 chr17 17495732 17495769 -67942711 + AT_rich Low_complexity Low_complexity 1 37 0 1851 153 19 7 chr17 17496632 17496939 -67941541 + MER7A DNA MER2_type 2 310 -36 2308 70 7 3 chr17 17496957 17497256 -67941224 - AluY SINE Alu -5 306 7 1507 80 0 15 chr17 17497266 17497466 -67941014 - AluSc SINE Alu -20 289 93 375 265 68 14 chr17 17498203 17498350 -67940130 - MER106B DNA MER1_type -1 1058 904 208 310 42 0 chr17 17499291 17499362 -67939118 + L2 LINE L2 2996 3069 -203 193 135 39 0 chr17 17499527 17499579 -67938901 + (TGAA)n Simple_repeat Simple_repeat 3 56 0 225 218 39 13 chr17 17500552 17500630 -67937850 + A-rich Low_complexity Low_complexity 5 84 0 21 82 0 0 chr17 17501595 17501644 -67936836 + AT_rich Low_complexity Low_complexity 1 49 0 198 0 0 0 chr17 17501849 17501871 -67936609 + (TA)n Simple_repeat Simple_repeat 1 22 0 230 210 48 0 chr17 17505212 17505274 -67933206 - L1ME LINE L1 -237 5929 5865 2159 80 17 10 chr17 17505476 17505764 -67932716 + AluY SINE Alu 1 290 -21 423 184 80 16 chr17 17505782 17505907 -67932573 + L1 LINE L1 5191 5323 -823 210 375 0 0 chr17 17506820 17506916 -67931564 + CT-rich Low_complexity Low_complexity 4 99 0 1678 214 3 3 chr17 17508051 17508354 -67930126 + AluJo SINE Alu 2 304 -8 966 96 0 22 chr17 17508638 17508773 -67929707 - FLAM_C SINE Alu 0 133 2 809 295 76 28 chr17 17510067 17510565 -67927915 + MER90 LTR ERV1 70 591 -23 320 204 75 11 chr17 17510923 17511016 -67927464 + L1MD3 LINE L1 7897 7995 0 303 279 84 58 chr17 17511423 17511577 -67926903 - L1ME LINE L1 -5591 479 322 535 157 14 29 chr17 17511584 17511724 -67926756 + C-rich Low_complexity Low_complexity 5 142 0 1207 165 10 0 chr17 17511724 17511918 -67926562 - AluJo SINE Alu -45 267 72 3599 43 39 2 chr17 17513188 17513630 -67924850 + L1PA6 LINE L1 5693 6150 -4 256 320 16 25 chr17 17514635 17514757 -67923723 + G-rich Low_complexity Low_complexity 1 121 0 290 302 11 44 chr17 17514894 17515076 -67923404 + G-rich Low_complexity Low_complexity 2 177 0 209 270 0 59 chr17 17515134 17515286 -67923194 + GA-rich Low_complexity Low_complexity 3 145 0 21 36 0 0 chr17 17517397 17517425 -67921055 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr17 17517940 17517969 -67920511 + AT_rich Low_complexity Low_complexity 1 29 0 187 337 163 12 chr17 17518759 17518845 -67919635 + MIR SINE MIR 156 254 -8 240 235 0 0 chr17 17519007 17519058 -67919422 - MLT1E1 LTR MaLR 0 593 543 1112 217 37 51 chr17 17519118 17519208 -67919272 - MLT1E1 LTR MaLR -303 351 261 1767 141 79 7 chr17 17519208 17519499 -67918981 - AluJb SINE Alu 0 312 1 1112 217 37 51 chr17 17519499 17519763 -67918717 - MLT1E1 LTR MaLR -393 261 2 2803 136 7 15 chr17 17522065 17522522 -67915958 + L1PA16 LINE L1 5705 6157 -9 39040 73 9 1 chr17 17524063 17529609 -67908871 + L1P2 LINE L1 11 5595 -559 262 221 39 26 chr17 17529723 17529877 -67908603 + (TGGG)n Simple_repeat Simple_repeat 1 156 0 * 377 197 0 83 chr17 17529788 17529981 -67908499 + G-rich Low_complexity Low_complexity 2 178 0 5344 78 0 1 chr17 17530008 17530700 -67907780 + L1PA5 LINE L1 5462 6152 -2 794 208 72 5 chr17 17531728 17531935 -67906545 - L1M4 LINE L1 -5144 1398 1178 1621 156 8 4 chr17 17531937 17532194 -67906286 + AluSq SINE Alu 1 258 -55 1698 153 39 0 chr17 17532298 17532576 -67905904 + AluJo SINE Alu 21 308 0 1721 274 93 28 chr17 17532578 17533319 -67905161 - L1M4 LINE L1 -5731 811 23 494 276 136 5 chr17 17533329 17533550 -67904930 + Charlie2 DNA MER1_type 69 318 -2464 1357 218 57 35 chr17 17533569 17534059 -67904421 + Charlie2 DNA MER1_type 1866 2366 -496 266 307 24 24 chr17 17535124 17535251 -67903229 + MLT1J2 LTR MaLR 80 206 -244 462 276 50 50 chr17 17535678 17535764 -67902716 - MIR SINE MIR -21 241 156 1978 158 3 13 chr17 17535764 17536075 -67902405 - AluJo SINE Alu -4 308 1 462 276 50 50 chr17 17536075 17536209 -67902271 - MIR SINE MIR -105 157 21 743 175 8 0 chr17 17536569 17536689 -67901791 - FLAM_C SINE Alu -21 122 2 275 317 50 0 chr17 17536735 17536836 -67901644 - MIR SINE MIR -148 114 9 1490 150 4 77 chr17 17537153 17537427 -67901053 - AluJo SINE Alu -54 258 5 972 210 38 0 chr17 17538171 17538238 -67900242 - AluJo SINE Alu -117 195 132 180 0 0 0 chr17 17538238 17538258 -67900222 + (TTA)n Simple_repeat Simple_repeat 2 21 0 972 210 38 0 chr17 17538258 17538376 -67900104 - AluJo SINE Alu -180 132 3 406 290 101 34 chr17 17538395 17538633 -67899847 + MIR SINE MIR 2 255 -7 316 343 35 0 chr17 17538643 17538815 -67899665 + L1ME3A LINE L1 5988 6165 -5 579 281 65 84 chr17 17541214 17541737 -67896743 + MER34 LTR ERV1 1 513 -29 1514 224 45 65 chr17 17542213 17542890 -67895590 + LTR49-int LTR ERV1 368 1452 -4494 331 246 96 141 chr17 17543569 17543845 -67894635 + L1MEc LINE L1 1994 2281 -3934 1919 175 3 0 chr17 17543845 17544153 -67894327 + AluSx SINE Alu 1 309 -3 331 246 96 141 chr17 17544153 17544360 -67894120 + L1MEc LINE L1 2281 3341 -2874 1352 153 5 5 chr17 17544689 17544911 -67893569 + L1M2 LINE L1 5527 5748 -543 595 216 88 68 chr17 17544911 17545161 -67893319 - LTR48B LTR ERV1 0 644 390 351 278 51 17 chr17 17545213 17545415 -67893065 - LTR48 LTR ERV1 -375 279 9 813 180 6 35 chr17 17545440 17545612 -67892868 + L1MA9 LINE L1 5740 5906 -406 428 162 0 0 chr17 17545613 17545681 -67892799 + Tigger2 DNA MER2_type 2 69 -2649 * 2445 157 25 11 chr17 17545679 17546112 -67892368 + Tigger2 DNA MER2_type 2280 2718 0 1674 146 65 63 chr17 17546141 17546255 -67892225 + L1MA9 LINE L1 5921 6033 -279 2058 138 3 0 chr17 17546255 17546568 -67891912 + AluSx SINE Alu 1 314 0 1674 146 65 63 chr17 17546568 17546835 -67891645 + L1MA9 LINE L1 6033 6304 -8 554 299 68 21 chr17 17547016 17547354 -67891126 + L1MEd LINE L1 897 1250 -4869 1578 235 70 79 chr17 17547430 17548171 -67890309 + L1MC4 LINE L1 7267 8013 -29 2773 53 0 0 chr17 17548171 17548512 -67889968 - L1PA4 LINE L1 -3 6152 5812 1932 128 8 0 chr17 17548513 17548779 -67889701 - AluSx SINE Alu -44 268 1 1578 235 70 79 chr17 17548779 17548817 -67889663 + L1MC4 LINE L1 8012 8041 -1 1869 167 3 10 chr17 17548886 17549186 -67889294 - AluSx SINE Alu -14 298 1 2660 198 92 2 chr17 17549353 17549899 -67888581 + LTR49 LTR ERV1 1 595 0 2064 178 34 36 chr17 17549901 17550373 -67888107 + LTR49-int LTR ERV1 1 472 -5474 1811 145 40 14 chr17 17550373 17550670 -67887810 + AluSx SINE Alu 1 305 -7 2064 178 34 36 chr17 17550670 17551084 -67887396 + LTR49-int LTR ERV1 472 1472 -4474 2430 77 31 0 chr17 17551084 17551408 -67887072 + L1PA10 LINE L1 5835 6168 0 429 188 0 24 chr17 17551510 17551595 -67886885 + LTR49-int LTR ERV1 760 842 -5489 2723 177 16 36 chr17 17551631 17552006 -67886474 + LTR49-int LTR ERV1 841 1203 -5128 2120 126 0 7 chr17 17552006 17552300 -67886180 - AluSc SINE Alu -17 292 1 2723 177 16 36 chr17 17552300 17552472 -67886008 + LTR49-int LTR ERV1 1203 1377 -4954 1011 138 36 6 chr17 17552601 17552768 -67885712 + LTR49-int LTR ERV1 1372 1543 -4788 1880 138 4 4 chr17 17552785 17553061 -67885419 + AluJb SINE Alu 22 297 -15 1483 188 63 0 chr17 17553067 17553228 -67885252 - AluSx SINE Alu -13 299 113 225 0 0 0 chr17 17553228 17553253 -67885227 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 1483 188 63 0 chr17 17553253 17553362 -67885118 - AluSx SINE Alu -199 113 12 1294 163 107 63 chr17 17553413 17553562 -67884918 + AluJo SINE Alu 1 169 -143 2375 84 7 0 chr17 17553562 17553858 -67884622 + AluSp SINE Alu 1 298 -15 1294 163 107 63 chr17 17553858 17553978 -67884502 + AluJo SINE Alu 169 282 -30 207 114 0 0 chr17 17553981 17554016 -67884464 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 432 194 41 10 chr17 17554016 17554114 -67884366 + LTR49-int LTR ERV1 3124 3224 -3107 6477 155 45 32 chr17 17554131 17555457 -67883023 + LTR49-int LTR ERV1 3703 5045 -1286 6663 125 16 10 chr17 17555557 17556586 -67881894 + LTR49-int LTR ERV1 5013 6047 -284 894 111 25 25 chr17 17556578 17556740 -67881740 + LTR49-int LTR ERV1 6169 6330 -1 * 575 85 0 12 chr17 17556823 17556905 -67881575 + LTR49 LTR ERV1 38 118 -477 1359 158 54 170 chr17 17556957 17557405 -67881075 - MSTD LTR MaLR 0 396 1 1368 233 119 2 chr17 17557510 17557956 -67880524 - MLT1D LTR MaLR -7 498 1 499 208 9 9 chr17 17559941 17560047 -67878433 + MER70B LTR ERVL 472 577 -1 1996 200 60 74 chr17 17561247 17561816 -67876664 + MER72 LTR ERV1 3 563 -159 1273 131 48 0 chr17 17561826 17562032 -67876448 - MER2 DNA MER2_type 0 345 130 1067 93 50 0 chr17 17562057 17562218 -67876262 - MER30 DNA MER1_type -61 169 1 529 183 11 0 chr17 17562218 17562309 -67876171 - MER2 DNA MER2_type -206 139 48 4328 189 24 15 chr17 17562402 17563186 -67875294 - MER21B LTR ERV1 -72 791 1 1696 171 10 24 chr17 17563340 17563658 -67874822 - AluJo SINE Alu 0 314 1 952 162 279 9 chr17 17563703 17563925 -67874555 + MER49 LTR ERV1 1 282 -641 1524 188 32 20 chr17 17563957 17564298 -67874182 + MER4D LTR ERV1 549 893 -10 1493 222 172 0 chr17 17564860 17565302 -67873178 - L1MB7 LINE L1 -7 6177 5660 300 83 0 0 chr17 17565868 17565916 -67872564 + (TG)n Simple_repeat Simple_repeat 2 49 0 1842 205 73 62 chr17 17566386 17566937 -67871543 - MER89 LTR ERV1 -2 557 1 227 247 0 27 chr17 17569056 17569129 -67869351 + (TTA)n Simple_repeat Simple_repeat 3 73 0 233 250 0 0 chr17 17569298 17569354 -67869126 - L1MB7 LINE L1 -574 5668 5613 2575 191 53 4 chr17 17569359 17569866 -67868614 - MER34 LTR ERV1 0 542 11 1067 241 59 46 chr17 17569897 17570159 -67868321 - L1MB7 LINE L1 -751 5395 5138 2358 199 18 64 chr17 17570159 17570756 -67867724 - MER101B LTR ERV1 0 570 1 1067 241 59 46 chr17 17570756 17570904 -67867576 - L1MB7 LINE L1 -1008 5138 5175 2161 128 0 0 chr17 17570904 17571201 -67867279 + AluSg SINE Alu 1 297 -13 1067 241 59 46 chr17 17571201 17571416 -67867064 - L1MB7 LINE L1 -970 5176 4965 4784 130 113 11 chr17 17571430 17572237 -67866243 - MER49 LTR ERV1 -21 902 14 325 258 156 16 chr17 17572292 17572478 -67866002 - L1MB7 LINE L1 -1212 4934 4723 3106 164 28 5 chr17 17572690 17573256 -67865224 - L1MA7 LINE L1 -1 6290 5712 29 98 0 0 chr17 17574745 17574837 -67863643 + AT_rich Low_complexity Low_complexity 1 92 0 281 220 30 23 chr17 17575388 17575520 -67862960 + (TA)n Simple_repeat Simple_repeat 1 133 0 228 111 0 0 chr17 17575592 17575628 -67862852 + (TAG)n Simple_repeat Simple_repeat 1 36 0 670 197 130 14 chr17 17575799 17575918 -67862562 + MER89 LTR ERV1 218 322 -237 1249 236 67 98 chr17 17575918 17576549 -67861931 + LTR9 LTR ERV1 2 612 0 670 197 130 14 chr17 17576549 17576652 -67861828 + MER89 LTR ERV1 322 466 -93 2387 147 11 69 chr17 17576664 17576924 -67861556 + L1MC1 LINE L1 5846 6067 -266 4508 138 19 38 chr17 17576924 17577718 -67860762 + MER4E LTR ERV1 1 779 0 2387 147 11 69 chr17 17577718 17577933 -67860547 + L1MC1 LINE L1 6067 6293 -40 881 241 30 31 chr17 17577945 17578435 -67860045 - MER34B LTR ERV1 -12 530 1 951 241 128 48 chr17 17578499 17579029 -67859451 + MER34C LTR ERV1 1 786 -1 1240 176 39 19 chr17 17579202 17579265 -67859215 + LTR54 LTR ERV1 1 61 -449 4459 157 15 18 chr17 17579265 17580050 -67858430 + LTR39 LTR ERV1 1 783 0 1240 176 39 19 chr17 17580050 17580427 -67858053 + LTR54 LTR ERV1 61 510 0 489 227 0 9 chr17 17581076 17581186 -67857294 - L1MC/D LINE L1 -586 5773 5665 291 229 43 0 chr17 17581274 17581344 -67857136 - MER77 LTR ERV1 -366 239 167 184 303 61 10 chr17 17581489 17581588 -67856892 - L3 LINE CR1 -106 1471 1368 1804 172 3 14 chr17 17581841 17582138 -67856342 - AluJb SINE Alu -13 299 6 1909 137 28 0 chr17 17582183 17582467 -67856013 + AluSx SINE Alu 1 292 -20 250 218 10 0 chr17 17582730 17582807 -67855673 + MER5A DNA MER1_type 4 81 -108 2155 131 0 0 chr17 17583373 17583664 -67854816 - AluSx SINE Alu -21 291 1 2503 81 0 0 chr17 17584463 17584772 -67853708 + AluY SINE Alu 1 309 -2 214 265 41 10 chr17 17585509 17585607 -67852873 + MER5A DNA MER1_type 9 109 -80 316 257 27 112 chr17 17585669 17585856 -67852624 - MER5A DNA MER1_type 0 189 19 547 113 12 0 chr17 17585967 17586047 -67852433 + AluJ/FLAM SINE Alu 11 91 -221 29 0 0 0 chr17 17586767 17586796 -67851684 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr17 17587353 17587381 -67851099 + AT_rich Low_complexity Low_complexity 1 28 0 327 85 0 0 chr17 17587479 17587526 -67850954 + (CA)n Simple_repeat Simple_repeat 1 47 0 1231 178 14 0 chr17 17587993 17588201 -67850279 - HERVL74 LTR ERVL -3657 2028 1818 863 150 0 0 chr17 17588201 17588334 -67850146 + AluJb SINE Alu 159 291 -21 201 132 0 0 chr17 17588362 17588400 -67850080 + (CA)n Simple_repeat Simple_repeat 1 38 0 213 247 124 22 chr17 17588767 17588856 -67849624 + MIR SINE MIR 149 246 -16 1633 173 11 0 chr17 17588987 17589265 -67849215 - AluJb SINE Alu -30 282 2 231 212 91 15 chr17 17590196 17590262 -67848218 - L1P LINE L1 -3329 2817 2747 463 239 58 85 chr17 17590609 17590939 -67847541 - L2 LINE L2 -539 2775 2455 252 270 27 47 chr17 17590977 17591179 -67847301 - L2 LINE L2 -1083 2231 1959 1099 208 5 0 chr17 17591629 17591826 -67846654 + AluJo SINE Alu 10 207 -105 269 213 37 0 chr17 17593073 17593181 -67845299 + (CGGGG)n Simple_repeat Simple_repeat 3 114 0 234 231 0 0 chr17 17594572 17594637 -67843843 - MIR SINE MIR -34 228 164 21 0 0 0 chr17 17594924 17594945 -67843535 + AT_rich Low_complexity Low_complexity 1 21 0 1976 67 0 8 chr17 17595129 17595367 -67843113 + AluY SINE Alu 69 304 -7 289 313 99 8 chr17 17595524 17595655 -67842825 + L1MEd LINE L1 554 696 -5509 306 274 26 8 chr17 17595864 17595981 -67842499 + L1M3de LINE L1 1784 1902 -4751 * 1532 225 69 14 chr17 17595980 17596416 -67842064 + L1MEd LINE L1 1640 2099 -4297 3612 84 2 8 chr17 17596420 17596920 -67841560 + L1PB1 LINE L1 5294 5790 -361 241 152 0 0 chr17 17596946 17596992 -67841488 + LTR66 LTR ERVL 394 439 -171 2636 91 14 6 chr17 17597017 17597381 -67841099 + L1PB1 LINE L1 5783 6149 -2 1499 293 84 11 chr17 17597389 17597996 -67840484 - L2 LINE L2 -1213 2101 1451 2411 97 0 0 chr17 17598656 17598954 -67839526 + AluY SINE Alu 1 298 -13 4183 232 42 24 chr17 17598978 17599567 -67838913 + L1MEd LINE L1 2111 2688 -3527 2111 128 3 3 chr17 17599567 17599883 -67838597 + AluSx SINE Alu 2 312 0 4183 232 42 24 chr17 17599883 17600756 -67837724 + L1MEd LINE L1 2688 3557 -2658 232 143 0 0 chr17 17600763 17600798 -67837682 - U2 snRNA snRNA -153 35 1 1451 155 0 30 chr17 17600827 17601059 -67837421 + AluSq SINE Alu 1 225 -88 1166 149 0 11 chr17 17600951 17601051 -67837429 + AluSg/x SINE Alu 119 218 -94 6422 116 30 19 chr17 17601051 17602108 -67836372 + MER11C LTR ERVK 1 1069 -2 1166 149 0 11 chr17 17602108 17602188 -67836292 + AluSg/x SINE Alu 218 297 -15 1951 136 6 29 chr17 17602189 17602505 -67835975 + AluSx SINE Alu 3 311 -1 3742 239 27 16 chr17 17602506 17603340 -67835140 + L1MEd LINE L1 3571 4423 -1792 492 165 18 0 chr17 17603340 17603449 -67835031 + L1MA8 LINE L1 6177 6287 -4 3742 239 27 16 chr17 17603449 17603708 -67834772 + L1MEd LINE L1 4423 4677 -1538 3445 150 39 18 chr17 17603966 17604638 -67833842 - L1MB3 LINE L1 -202 5981 5296 1019 246 123 3 chr17 17604752 17604932 -67833548 - L1ME3A LINE L1 -8 6162 5983 1139 257 86 29 chr17 17604932 17605730 -67832750 - L1MB1 LINE L1 -242 5947 5079 427 270 14 54 chr17 17606592 17606740 -67831740 + L1ME1 LINE L1 5946 6087 -79 1445 223 45 34 chr17 17607805 17608251 -67830229 - LTR43 LTR ERV1 0 634 120 2866 134 4 2 chr17 17609015 17609477 -67829003 - MER4C LTR ERV1 -2 463 1 3061 134 24 26 chr17 17609766 17610341 -67828139 - MER4B LTR ERV1 -36 574 1 3680 159 21 3 chr17 17610341 17611342 -67827138 - MER4B-int LTR ERV1 0 6758 5705 6473 133 25 3 chr17 17611346 17612340 -67826140 - L1P LINE L1 -1456 4690 3668 324 0 0 0 chr17 17612340 17612376 -67826104 + (TG)n Simple_repeat Simple_repeat 2 37 0 6473 133 25 3 chr17 17612376 17612468 -67826012 - L1P LINE L1 -2478 3668 3580 3728 120 11 5 chr17 17612457 17613467 -67825013 + L1PA8A LINE L1 4693 5709 -422 * 333 0 0 0 chr17 17614155 17614192 -67824288 + (CA)n Simple_repeat Simple_repeat 2 38 0 2925 269 48 36 chr17 17614282 17615817 -67822663 - SST1 Satellite centromeric -11 1552 1 336 24 0 0 chr17 17616517 17616558 -67821922 + (CA)n Simple_repeat Simple_repeat 2 42 0 2910 269 48 36 chr17 17616654 17618184 -67820296 - SST1 Satellite centromeric -15 1548 1 423 0 0 0 chr17 17618883 17618930 -67819550 + (CA)n Simple_repeat Simple_repeat 2 48 0 2909 269 48 36 chr17 17619026 17620556 -67817924 - SST1 Satellite centromeric -15 1548 1 477 0 0 0 chr17 17621256 17621309 -67817171 + (CA)n Simple_repeat Simple_repeat 2 54 0 2906 270 50 35 chr17 17621405 17622931 -67815549 - SST1 Satellite centromeric -15 1548 1 444 19 0 0 chr17 17623631 17623684 -67814796 + (CA)n Simple_repeat Simple_repeat 2 54 0 2351 262 56 42 chr17 17623780 17625092 -67813388 - SST1 Satellite centromeric -15 1548 219 2694 168 63 26 chr17 17626841 17627284 -67811196 + MER4B-int LTR ERV1 5099 5571 -1187 1270 179 124 43 chr17 17627284 17627631 -67810849 - THE1C LTR MaLR 0 375 1 2694 168 63 26 chr17 17627631 17627790 -67810690 + MER4B-int LTR ERV1 5571 5723 -1035 5749 97 4 0 chr17 17627792 17628614 -67809866 - L1PA8A LINE L1 -2 6129 5305 1680 135 17 7 chr17 17628714 17629003 -67809477 + L1PA8A LINE L1 5838 6129 -2 3310 152 55 31 chr17 17629005 17629164 -67809316 - MER4B-int LTR ERV1 -1035 5723 5569 1270 179 124 43 chr17 17629164 17629511 -67808969 + THE1C LTR MaLR 1 375 0 3310 152 55 31 chr17 17629511 17630054 -67808426 - MER4B-int LTR ERV1 -1189 5569 5004 834 178 25 0 chr17 17630044 17630201 -67808279 - MER4B-int LTR ERV1 -2277 4481 4321 * 855 214 44 15 chr17 17630205 17630411 -67808069 - MER4B-int LTR ERV1 -2572 4186 3975 1119 282 28 23 chr17 17630425 17630815 -67807665 - SST1 Satellite centromeric -1171 392 1 191 125 25 0 chr17 17631546 17631586 -67806894 + GA-rich Low_complexity Low_complexity 2 42 0 237 98 0 0 chr17 17631593 17631634 -67806846 + (CA)n Simple_repeat Simple_repeat 2 42 0 1852 273 89 38 chr17 17631667 17632760 -67805720 - SST1 Satellite centromeric -21 1542 395 438 259 56 35 chr17 17632783 17632980 -67805500 - SST1 Satellite centromeric -1362 201 1 243 103 0 0 chr17 17633677 17633716 -67804764 + (CA)n Simple_repeat Simple_repeat 2 40 0 2585 286 55 40 chr17 17633806 17635335 -67803145 - SST1 Satellite centromeric -11 1552 1 459 0 0 0 chr17 17636035 17636086 -67802394 + (CA)n Simple_repeat Simple_repeat 2 52 0 2846 270 51 36 chr17 17636182 17637707 -67800773 - SST1 Satellite centromeric -15 1548 1 477 0 0 0 chr17 17638407 17638460 -67800020 + (CA)n Simple_repeat Simple_repeat 2 54 0 2863 269 48 36 chr17 17638556 17640085 -67798395 - SST1 Satellite centromeric -15 1548 1 731 306 92 33 chr17 17640488 17641155 -67797325 - SST1 Satellite centromeric -11 1552 847 951 259 4 16 chr17 17641156 17641403 -67797077 - AluJo SINE Alu -54 258 15 1049 210 55 107 chr17 17642658 17643043 -67795437 - MLT1A1 LTR MaLR 0 365 1 758 261 78 52 chr17 17643402 17643724 -67794756 - L1P4 LINE L1 -364 5804 5492 2398 92 5 43 chr17 17643724 17644093 -67794387 + THE1A LTR MaLR 1 355 0 10779 117 2 1 chr17 17644093 17645672 -67792808 + THE1A-int LTR MaLR 1 1580 0 2038 156 23 0 chr17 17645672 17646019 -67792461 + THE1A LTR MaLR 1 355 0 758 261 78 52 chr17 17646019 17646330 -67792150 - L1P4 LINE L1 -676 5492 5190 1683 146 107 7 chr17 17646330 17646611 -67791869 - AluSx SINE Alu -1 311 3 758 261 78 52 chr17 17646611 17647102 -67791378 - L1P4 LINE L1 -978 5190 4647 27 0 0 0 chr17 17647113 17647140 -67791340 + AT_rich Low_complexity Low_complexity 1 27 0 198 0 0 0 chr17 17647140 17647162 -67791318 + (GA)n Simple_repeat Simple_repeat 2 23 0 1465 189 0 42 chr17 17647162 17647447 -67791033 - AluJo SINE Alu -39 273 1 21 36 0 0 chr17 17648208 17648236 -67790244 + AT_rich Low_complexity Low_complexity 1 28 0 2156 121 0 0 chr17 17648413 17648720 -67789760 - AluSq SINE Alu 0 307 1 321 284 37 9 chr17 17648764 17648873 -67789607 - HAL1b LINE L1 -1 1347 1236 1889 162 3 3 chr17 17648947 17649244 -67789236 - AluSx SINE Alu -13 299 3 761 197 0 0 chr17 17649469 17649601 -67788879 - FLAM_C SINE Alu -1 132 1 1615 177 7 17 chr17 17650060 17650360 -67788120 + AluJb SINE Alu 1 297 -15 4263 141 46 4 chr17 17650362 17651042 -67787438 + Tigger1 DNA MER2_type 1066 1773 -645 2072 120 41 0 chr17 17651042 17651333 -67787147 - AluSp SINE Alu -10 303 1 770 258 36 10 chr17 17651390 17651584 -67786896 + MER115 DNA AcHobo 445 643 -50 305 99 50 20 chr17 17651765 17651866 -67786614 + (TTATA)n Simple_repeat Simple_repeat 2 105 0 3739 131 14 44 chr17 17651887 17652389 -67786091 + Tigger1 DNA MER2_type 1802 2283 -135 1940 126 40 0 chr17 17652389 17652667 -67785813 - AluSx SINE Alu -22 290 2 3739 131 14 44 chr17 17652667 17652800 -67785680 + Tigger1 DNA MER2_type 2283 2418 0 468 314 103 35 chr17 17652803 17653173 -67785307 - LTR16C LTR ERVL -17 474 80 1126 274 112 26 chr17 17653280 17653828 -67784652 + MER115 DNA AcHobo 10 643 -50 1715 120 14 18 chr17 17654229 17654513 -67783967 - L1MA4 LINE L1 0 6300 6018 378 246 112 93 chr17 17654800 17655015 -67783465 - MIR SINE MIR 0 262 44 1898 139 0 14 chr17 17655119 17655434 -67783046 + AluSx SINE Alu 7 317 0 288 307 50 0 chr17 17655528 17655629 -67782851 - L2 LINE L2 -15 3298 3193 312 378 32 0 chr17 17656236 17656392 -67782088 - MIR SINE MIR -74 188 28 24 32 0 0 chr17 17656537 17656568 -67781912 + AT_rich Low_complexity Low_complexity 1 31 0 282 306 32 19 chr17 17656798 17656955 -67781525 + L1M4 LINE L1 3707 3865 -2281 602 89 0 11 chr17 17657051 17657141 -67781339 - L1PA16 LINE L1 -9 6157 6069 630 232 0 43 chr17 17657379 17657517 -67780963 + FLAM_A SINE Alu 1 132 -1 1521 200 31 9 chr17 17657518 17657857 -67780623 - MER93a LTR ERV1 -7 395 4 21 0 0 0 chr17 17658300 17658321 -67780159 + AT_rich Low_complexity Low_complexity 1 21 0 4632 174 44 24 chr17 17658333 17658822 -67779658 + L1MB3 LINE L1 5099 5577 -606 1992 132 0 4 chr17 17658822 17659146 -67779334 + AluSg SINE Alu 1 323 0 4632 174 44 24 chr17 17659146 17659722 -67778758 + L1MB3 LINE L1 5577 6180 -3 28 79 0 0 chr17 17659730 17659793 -67778687 + AT_rich Low_complexity Low_complexity 1 63 0 27 0 0 0 chr17 17660274 17660301 -67778179 + AT_rich Low_complexity Low_complexity 1 27 0 2227 100 7 3 chr17 17660303 17660602 -67777878 - AluSg SINE Alu -10 300 1 2080 141 0 0 chr17 17661166 17661463 -67777017 + AluSq SINE Alu 1 297 -16 2024 123 4 0 chr17 17661479 17661756 -67776724 + AluSp SINE Alu 4 281 -32 240 43 43 21 chr17 17661757 17661804 -67776676 + (TAAAA)n Simple_repeat Simple_repeat 2 49 0 1458 162 4 0 chr17 17661838 17662085 -67776395 - L1M2 LINE L1 -498 5793 5546 1055 157 0 0 chr17 17662255 17662437 -67776043 - AluSg/x SINE Alu 0 312 131 1871 159 0 7 chr17 17662562 17662852 -67775628 + AluJb SINE Alu 1 288 -24 2122 120 3 23 chr17 17663692 17664000 -67774480 + AluSq SINE Alu 5 306 -7 505 304 60 16 chr17 17664131 17664478 -67774002 + L1ME3A LINE L1 5421 5784 -389 46 33 0 0 chr17 17664480 17664540 -67773940 + AT_rich Low_complexity Low_complexity 1 60 0 1895 151 0 0 chr17 17664540 17664825 -67773655 - AluSx SINE Alu -25 287 3 1901 127 16 52 chr17 17664827 17664988 -67773492 - AluSx SINE Alu -16 296 150 1871 133 7 7 chr17 17664988 17665266 -67773214 - AluSc SINE Alu -20 289 12 1901 127 16 52 chr17 17665266 17665411 -67773069 - AluSx SINE Alu -162 150 1 254 237 54 21 chr17 17665451 17665544 -67772936 + L1ME3A LINE L1 5852 5947 -223 1578 130 4 29 chr17 17665590 17665836 -67772644 + AluSg/x SINE Alu 65 304 -8 1479 93 6 0 chr17 17666185 17666367 -67772113 + AluSq SINE Alu 1 183 -130 232 206 162 0 chr17 17666368 17666436 -67772044 + AluSq SINE Alu 223 301 -2 788 182 6 3 chr17 17666705 17666869 -67771611 + L1MA9 LINE L1 5803 5969 -331 2166 135 0 3 chr17 17666869 17667180 -67771300 + AluSg SINE Alu 1 310 0 228 338 76 14 chr17 17667826 17667971 -67770509 + MIR SINE MIR 21 174 -88 4895 174 39 10 chr17 17668482 17669418 -67769062 + L1MC2 LINE L1 5361 6323 -21 2019 134 0 0 chr17 17669423 17669736 -67768744 - AluY SINE Alu 0 313 1 978 185 0 0 chr17 17669739 17669896 -67768584 - AluJb SINE Alu -19 293 137 1303 208 44 6 chr17 17669901 17670211 -67768269 + L1MC/D LINE L1 5370 5626 -718 33 25 0 0 chr17 17670211 17670251 -67768229 + AT_rich Low_complexity Low_complexity 1 40 0 23 0 0 0 chr17 17670430 17670453 -67768027 + AT_rich Low_complexity Low_complexity 1 23 0 1125 140 5 50 chr17 17670723 17670923 -67767557 + AluSx SINE Alu 1 191 -121 542 187 24 24 chr17 17671004 17671127 -67767353 - L2 LINE L2 -4 3309 3187 1080 115 0 0 chr17 17671165 17671304 -67767176 + AluSq/x SINE Alu 3 141 -172 2106 107 3 27 chr17 17671304 17671603 -67766877 + AluSx SINE Alu 1 292 -20 843 127 14 28 chr17 17671744 17671886 -67766594 - AluSp/q SINE Alu -2 311 172 2179 136 0 0 chr17 17671924 17672232 -67766248 + AluSg SINE Alu 1 308 -2 529 28 0 0 chr17 17672614 17672686 -67765794 + AluY SINE Alu 240 311 0 2339 221 115 6 chr17 17672714 17673234 -67765246 - MER77 LTR ERV1 -28 577 1 1787 183 3 3 chr17 17673340 17673641 -67764839 - AluJb SINE Alu -11 301 1 482 119 0 0 chr17 17673675 17673742 -67764738 + AluJ/FLAM SINE Alu 2 68 -244 1944 147 7 0 chr17 17673742 17674041 -67764439 + AluSx SINE Alu 1 301 -11 260 243 14 0 chr17 17674042 17674112 -67764368 + (TA)n Simple_repeat Simple_repeat 1 71 0 1544 175 53 23 chr17 17674412 17674715 -67763765 - MER44D DNA MER2_type -1 604 421 359 0 43 0 chr17 17674716 17674762 -67763718 + (TTTC)n Simple_repeat Simple_repeat 2 49 0 6267 16 0 0 chr17 17674763 17675461 -67763019 - L1PA2 LINE L1 0 6155 5458 2657 33 0 3 chr17 17675461 17675792 -67762688 + L1P1 LINE L1 4980 5309 -837 1070 16 0 0 chr17 17675945 17676069 -67762411 + L1P1 LINE L1 5404 5527 -628 894 46 39 0 chr17 17676069 17676199 -67762281 + (TTTC)n Simple_repeat Simple_repeat 4 138 0 1849 171 3 0 chr17 17676221 17676508 -67761972 - AluSx SINE Alu -24 288 1 266 276 57 8 chr17 17676563 17676686 -67761794 + HAL1b LINE L1 1215 1343 -5 1863 151 11 0 chr17 17676829 17677100 -67761380 + AluSx SINE Alu 11 284 -28 1982 126 7 0 chr17 17677189 17677467 -67761013 + AluSx SINE Alu 1 280 -32 198 0 0 0 chr17 17677468 17677490 -67760990 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 285 29 0 0 chr17 17679063 17679097 -67759383 + (TG)n Simple_repeat Simple_repeat 1 34 0 1555 198 3 7 chr17 17679436 17679724 -67758756 - AluJb SINE Alu -21 291 5 583 155 0 3 chr17 17679854 17680092 -67758388 + AluSx SINE Alu 1 312 0 1528 174 47 19 chr17 17680186 17680508 -67757972 - L1MB8 LINE L1 0 6178 5848 839 260 48 70 chr17 17680943 17681425 -67757055 - PABL_B LTR ERV1 -42 625 1 2057 145 3 0 chr17 17681674 17681984 -67756496 - AluSq SINE Alu -2 311 1 2146 110 3 0 chr17 17681986 17682276 -67756204 - AluSx SINE Alu -21 291 1 1101 144 0 6 chr17 17682284 17682458 -67756022 - AluSq SINE Alu -10 303 131 23 0 0 0 chr17 17682460 17682483 -67755997 + AT_rich Low_complexity Low_complexity 1 23 0 587 98 0 0 chr17 17682733 17682815 -67755665 + AluY SINE Alu 217 298 -13 21 0 0 0 chr17 17682908 17682929 -67755551 + AT_rich Low_complexity Low_complexity 1 21 0 2073 122 3 13 chr17 17683101 17683404 -67755076 + AluSx SINE Alu 1 300 -12 2174 142 7 0 chr17 17683696 17684006 -67754474 + AluSx SINE Alu 1 312 0 1864 169 3 22 chr17 17684832 17685145 -67753335 - AluJb SINE Alu -5 307 1 2190 109 3 14 chr17 17685213 17685527 -67752953 + AluSp SINE Alu 1 311 0 2023 157 0 25 chr17 17685602 17685921 -67752559 + AluJo SINE Alu 1 311 -1 2217 119 0 0 chr17 17685921 17686216 -67752264 + AluSc SINE Alu 1 295 -14 1581 154 30 4 chr17 17686216 17686483 -67751997 - MER54A LTR ERVL -627 274 1 1468 153 141 0 chr17 17686660 17686922 -67751558 - AluSx SINE Alu -3 299 1 2288 114 3 0 chr17 17687521 17687819 -67750661 - AluSp SINE Alu -14 299 1 330 243 0 0 chr17 17687955 17688025 -67750455 + AluS SINE Alu 226 295 -6 1021 156 0 54 chr17 17688027 17688042 -67750438 + AluSg/x SINE Alu 120 134 -178 2322 104 3 0 chr17 17688042 17688351 -67750129 + AluSq SINE Alu 2 311 -2 1021 156 0 54 chr17 17688351 17688521 -67749959 + AluSg/x SINE Alu 134 295 -17 705 188 0 0 chr17 17688730 17688847 -67749633 + FLAM_C SINE Alu 1 117 -16 267 54 0 0 chr17 17688850 17688887 -67749593 + (TAAAA)n Simple_repeat Simple_repeat 2 38 0 443 147 0 0 chr17 17688913 17688981 -67749499 + AluJ/FRAM SINE Alu 225 292 -20 288 102 0 0 chr17 17689230 17689279 -67749201 + (T)n Simple_repeat Simple_repeat 1 49 0 504 16 0 0 chr17 17689280 17689343 -67749137 - L1PA2 LINE L1 -1 6154 6092 1240 217 4 0 chr17 17689545 17689789 -67748691 + AluJb SINE Alu 1 245 -67 1795 124 0 8 chr17 17689789 17690038 -67748442 + AluSx SINE Alu 34 280 -32 777 76 0 0 chr17 17690038 17690143 -67748337 + (GAAA)n Simple_repeat Simple_repeat 3 107 0 1245 222 20 20 chr17 17690152 17690458 -67748022 + AluJo SINE Alu 6 311 -1 3856 169 72 37 chr17 17690512 17691243 -67747237 - MER21B LTR ERV1 0 863 98 2163 108 16 32 chr17 17691243 17691558 -67746922 + AluSx SINE Alu 3 312 0 3856 169 72 37 chr17 17691558 17691660 -67746820 - MER21B LTR ERV1 -765 98 1 1467 172 22 52 chr17 17691961 17692429 -67746051 - LTR25 LTR ERV1 -47 747 362 803 141 263 29 chr17 17692429 17692741 -67745739 + LTR46 LTR ERV1 1 460 0 627 198 26 0 chr17 17692741 17692845 -67745635 - LTR25 LTR ERV1 -438 356 250 459 136 30 121 chr17 17692839 17692971 -67745509 - MER61E LTR ERV1 -417 152 33 * 1390 113 0 0 chr17 17693609 17693794 -67744686 + AluSg/x SINE Alu 114 298 -14 394 269 132 53 chr17 17693795 17694152 -67744328 - L2 LINE L2 -82 3231 2847 274 158 0 0 chr17 17694204 17694242 -67744238 - Alu SINE Alu -262 38 1 2447 93 3 0 chr17 17694607 17694917 -67743563 - AluSx SINE Alu -1 311 1 1693 168 14 0 chr17 17694966 17695258 -67743222 - AluSx SINE Alu -16 296 1 1973 135 10 13 chr17 17695468 17695780 -67742700 + AluSx SINE Alu 1 311 -1 1089 179 168 19 chr17 17695809 17696077 -67742403 - MER106B DNA MER1_type -535 524 217 1929 145 7 7 chr17 17696081 17696377 -67742103 - AluSx SINE Alu -16 296 1 544 153 0 0 chr17 17696388 17696473 -67742007 - AluJ/FLAM SINE Alu -226 86 2 699 232 9 73 chr17 17696473 17696693 -67741787 + L1MC4a LINE L1 6687 6892 -916 2013 116 9 44 chr17 17696695 17697013 -67741467 - AluSq SINE Alu -6 307 1 1329 113 4 74 chr17 17697363 17697592 -67740888 - AluSp SINE Alu -3 310 98 1915 147 0 7 chr17 17697592 17697877 -67740603 - AluSg SINE Alu -16 294 12 2023 136 0 7 chr17 17697896 17698183 -67740297 - AluSg SINE Alu -24 286 2 258 224 0 40 chr17 17698236 17698312 -67740168 - MER89 LTR ERV1 0 559 487 2232 225 9 18 chr17 17698327 17698453 -67740027 - L1P LINE L1 -858 5288 5162 1653 136 11 0 chr17 17698453 17698718 -67739762 - AluSg SINE Alu -1 309 42 2232 225 9 18 chr17 17698718 17699155 -67739325 - L1P LINE L1 -984 5162 4730 2345 158 19 9 chr17 17699164 17699583 -67738897 + L1PA16 LINE L1 5744 6166 0 2109 129 3 0 chr17 17699655 17699964 -67738516 + AluSg SINE Alu 1 310 0 2112 104 0 3 chr17 17700098 17700396 -67738084 + AluY SINE Alu 1 297 -14 2634 200 105 4 chr17 17700659 17701183 -67737297 - MER77 LTR ERV1 -28 577 1 232 277 24 0 chr17 17701185 17701268 -67737212 + L1ME LINE L1 5492 5576 -545 1499 201 7 0 chr17 17701308 17701597 -67736883 - AluJb SINE Alu -21 291 1 221 229 57 19 chr17 17701597 17701630 -67736850 + (TATATG)n Simple_repeat Simple_repeat 6 36 -78 1734 168 7 0 chr17 17701630 17701928 -67736552 + AluSq SINE Alu 1 300 -13 221 229 57 19 chr17 17701928 17701999 -67736481 + (TATATG)n Simple_repeat Simple_repeat 36 114 0 1539 201 17 3 chr17 17702293 17702592 -67735888 - MER44D DNA MER2_type -1 604 430 1604 200 0 0 chr17 17702595 17702989 -67735491 - AluSx SINE Alu 0 394 1 296 274 48 8 chr17 17703042 17703166 -67735314 + HAL1b LINE L1 1215 1343 -5 1995 143 0 0 chr17 17703294 17703594 -67734886 + AluSx SINE Alu 1 300 -12 1904 127 7 7 chr17 17703723 17704015 -67734465 + AluSx SINE Alu 2 293 -19 285 29 0 0 chr17 17705618 17705652 -67732828 + (TG)n Simple_repeat Simple_repeat 1 34 0 21 36 0 0 chr17 17705968 17705996 -67732484 + AT_rich Low_complexity Low_complexity 1 28 0 1265 187 4 30 chr17 17705996 17706258 -67732222 - AluJb SINE Alu -57 255 1 469 138 4 17 chr17 17706385 17706639 -67731841 + AluSx SINE Alu 1 312 0 1344 181 72 10 chr17 17706698 17707002 -67731478 - L1MB8 LINE L1 0 6178 5856 1556 129 6 129 chr17 17707102 17707428 -67731052 - AluSx SINE Alu -16 286 1 798 141 15 30 chr17 17707430 17707565 -67730915 - AluJo/FLAM SINE Alu -169 133 1 325 250 0 34 chr17 17707565 17707653 -67730827 - MER33 DNA MER1_type -201 123 39 1804 153 11 0 chr17 17707996 17708278 -67730202 - AluSx SINE Alu -17 295 11 2004 106 11 3 chr17 17708397 17708771 -67729709 - AluSq SINE Alu 0 376 1 868 150 7 0 chr17 17708774 17708914 -67729566 - AluYa5 SINE Alu -170 141 1 220 133 22 22 chr17 17709896 17709941 -67728539 + GA-rich Low_complexity Low_complexity 2 46 0 1225 180 131 14 chr17 17709985 17710268 -67728212 - SST1 Satellite centromeric -10 1553 1238 844 158 0 13 chr17 17710274 17710426 -67728054 + AluSg/x SINE Alu 157 306 -6 7611 140 34 27 chr17 17710499 17711895 -67726585 - SST1 Satellite centromeric -157 1406 1 1454 312 48 39 chr17 17712446 17713273 -67725207 - SST1 Satellite centromeric -312 1251 417 492 320 59 0 chr17 17713288 17713507 -67724973 - SST1 Satellite centromeric -1331 232 1 203 265 0 24 chr17 17714210 17714293 -67724187 + (CAGAGA)n Simple_repeat Simple_repeat 2 82 0 * 249 210 16 0 chr17 17714245 17714307 -67724173 + GA-rich Low_complexity Low_complexity 1 63 0 261 0 0 0 chr17 17714307 17714336 -67724144 + (CA)n Simple_repeat Simple_repeat 2 30 0 2526 259 56 42 chr17 17714340 17715713 -67722767 - SST1 Satellite centromeric -1315 1392 1 201 154 0 0 chr17 17716405 17716444 -67722036 + (CA)n Simple_repeat Simple_repeat 2 40 0 219 170 21 0 chr17 17716448 17716495 -67721985 + GA-rich Low_complexity Low_complexity 1 48 0 294 29 0 0 chr17 17716500 17716535 -67721945 + (CA)n Simple_repeat Simple_repeat 2 36 0 1011 243 62 55 chr17 17716572 17717135 -67721345 - SST1 Satellite centromeric -21 1542 976 291 319 97 21 chr17 17717731 17717875 -67720605 + MIR SINE MIR 58 212 -50 369 0 0 0 chr17 17719112 17719153 -67719327 + (TC)n Simple_repeat Simple_repeat 2 42 0 21 57 0 0 chr17 17719417 17719452 -67719028 + AT_rich Low_complexity Low_complexity 1 35 0 671 296 63 35 chr17 17719727 17720045 -67718435 + L1M4 LINE L1 2841 3167 -2979 470 127 13 0 chr17 17720295 17720374 -67718106 - MADE1 DNA Mariner 0 80 1 220 309 82 36 chr17 17720496 17720606 -67717874 - L2 LINE L2 -959 2355 2241 267 324 52 29 chr17 17721575 17721711 -67716769 - L2 LINE L2 0 3272 3134 21 36 0 0 chr17 17722708 17722736 -67715744 + AT_rich Low_complexity Low_complexity 1 28 0 211 269 103 0 chr17 17722961 17723039 -67715441 - L2 LINE L2 -5 3308 3223 21 36 0 0 chr17 17724248 17724276 -67714204 + AT_rich Low_complexity Low_complexity 1 28 0 25 0 0 0 chr17 17724512 17724537 -67713943 + AT_rich Low_complexity Low_complexity 1 25 0 21 82 0 0 chr17 17724722 17724771 -67713709 + AT_rich Low_complexity Low_complexity 1 49 0 1746 143 57 0 chr17 17725085 17725364 -67713116 - AluSq SINE Alu -18 295 1 2173 88 7 3 chr17 17725587 17725894 -67712586 - AluY SINE Alu -3 308 1 2045 133 0 0 chr17 17726061 17726355 -67712125 + AluSx SINE Alu 1 294 -18 3280 164 43 31 chr17 17726881 17727259 -67711221 - L1MA5 LINE L1 -2 6298 5907 2276 77 0 10 chr17 17727259 17727571 -67710909 - AluY SINE Alu -2 309 1 3280 164 43 31 chr17 17727571 17727840 -67710640 - L1MA5 LINE L1 -393 5907 5643 2822 221 30 1 chr17 17727843 17728537 -67709943 + L1MA8 LINE L1 3884 4597 -1549 1703 169 18 32 chr17 17728681 17729019 -67709461 - MER52A LTR ERV1 -1373 382 50 243 240 72 48 chr17 17729255 17729380 -67709100 - MER52A LTR ERV1 -1627 128 1 29 0 0 0 chr17 17729969 17729998 -67708482 + AT_rich Low_complexity Low_complexity 1 29 0 1686 203 0 0 chr17 17730385 17730696 -67707784 + AluSx SINE Alu 1 311 -1 434 238 40 7 chr17 17731551 17731702 -67706778 - L1MA8 LINE L1 -4 6287 6132 * 4252 158 44 45 chr17 17731685 17731984 -67706496 + L1MA8 LINE L1 5254 5552 -739 483 127 13 0 chr17 17731984 17732063 -67706417 + MADE1 DNA Mariner 1 80 0 4252 158 44 45 chr17 17732063 17732694 -67705786 + L1MA8 LINE L1 5552 6183 -108 30 72 0 12 chr17 17733090 17733125 -67705355 + AT_rich Low_complexity Low_complexity 1 35 -47 1798 138 4 0 chr17 17733125 17733401 -67705079 - AluSq SINE Alu -35 278 2 30 72 0 12 chr17 17733401 17733448 -67705032 + AT_rich Low_complexity Low_complexity 35 82 0 191 344 33 27 chr17 17734314 17734451 -67704029 - MIR SINE MIR -42 166 28 524 176 92 11 chr17 17734660 17734841 -67703639 + L1MA8 LINE L1 6104 6291 0 2133 69 24 3 chr17 17735726 17736015 -67702465 - AluY SINE Alu -16 295 1 323 345 115 20 chr17 17738299 17738551 -67699929 - L2 LINE L2 -39 3274 2999 496 275 7 27 chr17 17738589 17738738 -67699742 - L2 LINE L2 -939 2375 2230 581 311 32 32 chr17 17738738 17738989 -67699491 - L2 LINE L2 -2114 1200 950 1742 176 10 0 chr17 17739245 17739541 -67698939 + AluJo SINE Alu 1 299 -13 352 187 8 41 chr17 17739553 17739676 -67698804 + GA-rich Low_complexity Low_complexity 1 119 0 213 231 0 15 chr17 17739682 17739747 -67698733 + A-rich Low_complexity Low_complexity 4 67 0 889 184 0 80 chr17 17740086 17740298 -67698182 + AluJb SINE Alu 90 284 -28 508 296 100 37 chr17 17740312 17740691 -67697789 + L1 LINE L1 2204 2606 -3540 329 309 57 0 chr17 17740804 17740927 -67697553 + L1 LINE L1 2644 2773 -3373 191 86 0 29 chr17 17741213 17741248 -67697232 + (CATAT)n Simple_repeat Simple_repeat 3 36 0 183 376 172 0 chr17 17741270 17741363 -67697117 + L2 LINE L2 3125 3233 -39 258 256 35 23 chr17 17742743 17742829 -67695651 + MIR SINE MIR 41 127 -81 276 290 129 11 chr17 17742913 17743006 -67695474 + L2 LINE L2 3147 3250 -22 200 278 48 24 chr17 17744353 17744455 -67694025 - MIR SINE MIR -77 131 56 189 324 235 12 chr17 17745171 17745341 -67693139 - MIR SINE MIR -34 228 21 184 122 146 24 chr17 17745423 17745464 -67693016 + L2 LINE L2 3221 3266 -6 216 167 0 0 chr17 17746325 17746373 -67692107 + (CA)n Simple_repeat Simple_repeat 1 48 0 243 314 58 45 chr17 17747268 17747807 -67690673 - SST1 Satellite centromeric -952 611 66 261 0 0 0 chr17 17748572 17748601 -67689879 + (T)n Simple_repeat Simple_repeat 1 29 0 207 184 0 0 chr17 17748796 17748834 -67689646 + (CA)n Simple_repeat Simple_repeat 2 39 0 397 289 56 56 chr17 17749745 17750316 -67688164 - SST1 Satellite centromeric -962 601 31 397 152 0 0 chr17 17750331 17750410 -67688070 + ALR/Alpha Satellite centromeric 9 87 -85 897 200 8 2 chr17 17750496 17752632 -67685848 + ALR/Alpha Satellite centromeric 1 2149 -1 891 211 14 5 chr17 17752647 17753499 -67684981 + ALR/Alpha Satellite centromeric 1 860 -8 969 200 10 3 chr17 17753513 17763176 -67675304 + ALR/Alpha Satellite centromeric 1 9727 0 994 196 8 4 chr17 17763191 17764296 -67674184 + ALR/Alpha Satellite centromeric 1 1101 -11460 2182 112 0 10 chr17 17764296 17764631 -67673849 + AluY SINE Alu 1 332 0 994 196 8 4 chr17 17764631 17769214 -67669266 + ALR/Alpha Satellite centromeric 1101 5667 -6894 1896 149 7 17 chr17 17769214 17769510 -67668970 + AluSx SINE Alu 1 293 -19 994 196 8 4 chr17 17769510 17775659 -67662821 + ALR/Alpha Satellite centromeric 5667 12511 -50 3943 107 47 2 chr17 17775677 17776256 -67662224 - LTR14B LTR ERVK 0 608 4 873 213 0 0 chr17 17776263 17776662 -67661818 + ALR/Alpha Satellite centromeric 1 399 -1 1025 193 5 5 chr17 17776679 17781131 -67657349 + ALR/Alpha Satellite centromeric 1 4451 -29 2056 106 3 14 chr17 17781135 17781417 -67657063 + AluY SINE Alu 6 284 -27 931 192 4 2 chr17 17781558 17784527 -67653953 + ALR/Alpha Satellite centromeric 1 2976 -9 763 152 30 23 chr17 17784628 17784760 -67653720 - FLAM_C SINE Alu 0 133 1 506 86 0 0 chr17 17784765 17784835 -67653645 - Alu SINE Alu -12 299 230 547 284 21 103 chr17 17784914 17785238 -67653242 - L1MEd LINE L1 -4902 1217 868 2218 75 0 14 chr17 17785238 17785518 -67652962 - AluY SINE Alu 0 311 36 2836 202 78 100 chr17 17785518 17786508 -67651972 - LTR5 LTR ERVK 0 969 1 2214 111 7 0 chr17 17786561 17786858 -67651622 - AluSp SINE Alu -13 300 2 2427 93 0 0 chr17 17786871 17787181 -67651299 - AluSx SINE Alu -2 310 1 3095 125 4 47 chr17 17788430 17788704 -67649776 - MER4B LTR ERV1 -30 749 465 2044 124 3 0 chr17 17788704 17789002 -67649478 + AluSx SINE Alu 6 304 -8 3095 125 4 47 chr17 17789002 17789334 -67649146 - MER4B LTR ERV1 -314 465 1 247 167 17 17 chr17 17789681 17789741 -67648739 - FLAM SINE Alu 0 133 74 1938 138 0 0 chr17 17790462 17790775 -67647705 - AluSx SINE Alu 0 313 1 863 269 29 66 chr17 17790778 17790913 -67647567 - L1MC/D LINE L1 -2079 5729 5590 1879 110 28 48 chr17 17790913 17791227 -67647253 - AluSx SINE Alu 0 308 1 863 269 29 66 chr17 17791227 17791467 -67647013 - L1MC/D LINE L1 -2218 5590 5370 2295 70 0 27 chr17 17791467 17791768 -67646712 + AluY SINE Alu 1 293 -18 863 269 29 66 chr17 17791768 17791844 -67646636 - L1MC/D LINE L1 -2438 5370 5293 1580 210 17 3 chr17 17791894 17792194 -67646286 + AluJo SINE Alu 5 308 -4 1188 123 0 6 chr17 17792206 17792368 -67646112 + AluSx SINE Alu 1 161 -151 1562 183 3 34 chr17 17792415 17792710 -67645770 + AluJo SINE Alu 1 286 -26 408 20 0 0 chr17 17792711 17792760 -67645720 + (CA)n Simple_repeat Simple_repeat 2 50 0 300 269 131 34 chr17 17792802 17792977 -67645503 + L1ME4a LINE L1 5743 5934 -187 2088 104 0 63 chr17 17793070 17793241 -67645239 - AluSq SINE Alu -14 299 156 2235 100 3 10 chr17 17793241 17793541 -67644939 - AluSp SINE Alu -15 298 1 2088 104 0 63 chr17 17793541 17793687 -67644793 - AluSq SINE Alu -157 156 2 2171 117 0 16 chr17 17793867 17794176 -67644304 - AluSg SINE Alu -6 304 1 189 0 0 0 chr17 17795256 17795277 -67643203 + (ATG)n Simple_repeat Simple_repeat 2 22 0 1157 133 12 0 chr17 17795277 17795450 -67643030 - AluJb SINE Alu -29 283 109 2061 116 60 0 chr17 17795514 17795798 -67642682 + AluSx SINE Alu 1 301 -11 931 286 46 40 chr17 17795881 17796130 -67642350 + L1MC4a LINE L1 5317 5563 -2245 2196 106 25 43 chr17 17796130 17796478 -67642002 - L1MB3 LINE L1 -7 6176 5823 1648 97 5 0 chr17 17796478 17796694 -67641786 - AluSq SINE Alu -16 297 81 2252 112 0 13 chr17 17796694 17796998 -67641482 - AluSx SINE Alu -11 301 2 2243 87 0 13 chr17 17797002 17797301 -67641179 - AluSc SINE Alu -14 295 1 2196 106 25 43 chr17 17797301 17797344 -67641136 - L1MB3 LINE L1 -362 5821 5786 931 286 46 40 chr17 17797344 17797637 -67640843 + L1MC4a LINE L1 5563 5862 -1946 2214 87 10 10 chr17 17798216 17798514 -67639966 - AluSq SINE Alu -15 298 1 334 123 0 62 chr17 17798531 17798612 -67639868 - AluJ/FRAM SINE Alu 0 302 227 1239 134 13 31 chr17 17798891 17799074 -67639406 - AluJo SINE Alu -8 304 124 303 85 0 0 chr17 17799074 17799121 -67639359 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 1239 134 13 31 chr17 17799121 17799161 -67639319 - AluJo SINE Alu -188 124 85 416 39 0 0 chr17 17799161 17799212 -67639268 - AluSg/x SINE Alu -62 250 200 858 117 8 8 chr17 17799217 17799345 -67639135 - FLAM_C SINE Alu -13 130 3 2334 76 0 7 chr17 17799386 17799687 -67638793 + AluY SINE Alu 1 299 -12 2001 100 62 3 chr17 17799687 17799977 -67638503 + AluSx SINE Alu 1 307 -5 978 166 0 0 chr17 17799984 17800141 -67638339 + FRAM SINE Alu 1 152 -24 2033 101 59 7 chr17 17800278 17800565 -67637915 - AluSg SINE Alu -8 302 1 1541 181 46 3 chr17 17800643 17800925 -67637555 + AluSx SINE Alu 1 294 -18 1629 132 77 18 chr17 17800934 17801051 -67637429 + AluSx SINE Alu 1 110 -202 2148 133 3 3 chr17 17801051 17801352 -67637128 + AluSx SINE Alu 1 301 -11 1629 132 77 18 chr17 17801352 17801507 -67636973 + AluSx SINE Alu 110 289 -23 544 152 0 0 chr17 17801508 17801587 -67636893 + AluSg/x SINE Alu 210 288 -22 1099 97 0 7 chr17 17801624 17801769 -67636711 + AluSg SINE Alu 1 144 -166 2042 134 14 0 chr17 17801770 17802062 -67636418 + AluSx SINE Alu 2 297 -15 685 177 15 15 chr17 17802155 17802285 -67636195 + AluJo/FLAM SINE Alu 3 132 -170 1447 114 0 68 chr17 17802287 17802507 -67635973 + AluSx SINE Alu 1 205 -107 456 270 28 24 chr17 17802507 17802718 -67635762 - LTR4 LTR ERV1 0 596 385 496 185 0 0 chr17 17803121 17803202 -67635278 + AluSx SINE Alu 199 279 -30 1845 139 49 0 chr17 17803247 17803558 -67634922 - AluSx SINE Alu 0 312 1 1496 117 5 0 chr17 17803761 17803958 -67634522 + AluSc SINE Alu 1 198 -111 362 224 14 6 chr17 17804085 17804243 -67634237 + MIR SINE MIR 18 261 -1 472 156 0 0 chr17 17804275 17804352 -67634128 + AluSg/x SINE Alu 190 266 -44 1895 174 0 0 chr17 17804366 17804647 -67633833 + AluSx SINE Alu 2 282 -30 2204 113 3 7 chr17 17804666 17804967 -67633513 + AluSp SINE Alu 1 300 -13 392 198 0 12 chr17 17804991 17805077 -67633403 + MER103 DNA DNA 21 105 -61 2401 98 3 0 chr17 17805342 17805648 -67632832 + AluSq SINE Alu 1 307 -6 2248 113 0 0 chr17 17805658 17805958 -67632522 + AluSq SINE Alu 1 300 -13 1071 111 0 0 chr17 17805982 17806126 -67632354 + AluSg/x SINE Alu 163 306 -4 576 184 37 9 chr17 17806781 17806890 -67631590 - AluJ SINE Alu -16 296 185 840 156 0 16 chr17 17806898 17807026 -67631454 - AluJ SINE Alu -186 126 1 785 191 26 42 chr17 17807096 17807285 -67631195 - AluJo SINE Alu -7 305 120 426 201 129 14 chr17 17807315 17807454 -67631026 - MIR SINE MIR -96 166 12 1358 108 0 5 chr17 17807525 17807711 -67630769 - AluSg/x SINE Alu -5 305 121 2109 123 3 0 chr17 17807916 17808201 -67630279 + AluSx SINE Alu 1 286 -26 1077 187 57 5 chr17 17808514 17808723 -67629757 - AluJo SINE Alu -92 220 1 964 161 161 3 chr17 17808723 17809115 -67629365 - MER21B LTR ERV1 -371 492 20 1985 123 30 7 chr17 17809690 17809991 -67628489 + AluSx SINE Alu 1 308 -4 374 241 58 0 chr17 17810387 17810474 -67628006 + FRAM SINE Alu 60 151 -15 1761 116 21 0 chr17 17810489 17810730 -67627750 - AluSc SINE Alu -25 284 39 1878 90 11 19 chr17 17813322 17813588 -67624892 - AluSp SINE Alu -17 296 33 1959 96 32 7 chr17 17813695 17813976 -67624504 + AluSq SINE Alu 2 289 -24 763 182 52 13 chr17 17814072 17814226 -67624254 + FRAM SINE Alu 1 159 -17 2238 125 0 0 chr17 17814673 17814984 -67623496 + AluSx SINE Alu 1 311 -1 716 158 7 43 chr17 17814996 17815135 -67623345 + AluJo SINE Alu 1 134 -178 32 0 0 0 chr17 17815279 17815311 -67623169 + AT_rich Low_complexity Low_complexity 1 32 0 1256 154 0 22 chr17 17815318 17815405 -67623075 + AluJb SINE Alu 1 88 -224 2001 130 7 7 chr17 17815405 17815743 -67622737 + AluSx SINE Alu 1 338 0 1256 154 0 22 chr17 17815743 17815900 -67622580 + AluJb SINE Alu 88 291 -21 1161 187 91 9 chr17 17815916 17816135 -67622345 - AluJo SINE Alu -73 239 3 421 265 103 20 chr17 17816135 17816395 -67622085 - L1MC4a LINE L1 -341 5780 5598 2164 85 10 17 chr17 17816395 17816690 -67621790 - AluSq SINE Alu -20 293 1 421 265 103 20 chr17 17816690 17816718 -67621762 - L1MC4a LINE L1 -523 5598 5574 2236 99 6 6 chr17 17816772 17817084 -67621396 - AluSx SINE Alu 0 312 1 678 188 7 22 chr17 17817120 17817258 -67621222 + AluJo SINE Alu 3 138 -174 2161 111 7 3 chr17 17817265 17817563 -67620917 + AluY SINE Alu 1 299 -12 2228 98 3 0 chr17 17817574 17817860 -67620620 + AluSp SINE Alu 7 293 -20 22 0 0 0 chr17 17817860 17817882 -67620598 + AT_rich Low_complexity Low_complexity 1 22 0 981 160 30 0 chr17 17817882 17818051 -67620429 + AluJo SINE Alu 123 296 -16 1983 134 0 4 chr17 17818114 17818427 -67620053 - AluSg SINE Alu 0 316 5 1946 203 10 0 chr17 17818462 17818867 -67619613 + L1PA15-16 LINE L1 2278 2686 -4163 781 274 30 6 chr17 17818873 17819205 -67619275 + L1PA15-16 LINE L1 3476 3815 -3034 * 4491 227 26 8 chr17 17819183 17820330 -67618150 + L1PA15-16 LINE L1 4465 5632 -1217 472 356 91 9 chr17 17820501 17820720 -67617760 + HAL1 LINE L1 119 355 -2152 360 279 97 47 chr17 17820943 17821345 -67617135 + HAL1 LINE L1 700 1121 -1386 180 188 25 12 chr17 17821413 17821493 -67616987 + (TA)n Simple_repeat Simple_repeat 1 81 0 420 240 62 122 chr17 17821502 17821806 -67616674 - MER93a LTR ERV1 0 402 117 282 235 43 0 chr17 17821952 17822067 -67616413 + (CATATA)n Simple_repeat Simple_repeat 5 124 0 242 193 42 60 chr17 17822071 17822237 -67616243 + (TATAA)n Simple_repeat Simple_repeat 5 167 0 858 277 75 12 chr17 17822290 17822719 -67615761 + HAL1 LINE L1 1323 1778 -729 368 228 35 18 chr17 17822749 17822863 -67615617 + LTR16A LTR ERVL 20 135 -315 1362 203 19 0 chr17 17823099 17823410 -67615070 - L1MA4 LINE L1 -81 6219 5903 21 0 0 0 chr17 17823416 17823437 -67615043 + AT_rich Low_complexity Low_complexity 1 21 0 267 31 0 0 chr17 17824337 17824369 -67614111 + (TG)n Simple_repeat Simple_repeat 2 33 0 28 29 0 0 chr17 17825511 17825546 -67612934 + AT_rich Low_complexity Low_complexity 1 35 0 1214 177 23 0 chr17 17825966 17826231 -67612249 + L1MA6 LINE L1 6030 6300 0 23 33 0 0 chr17 17826872 17826902 -67611578 + AT_rich Low_complexity Low_complexity 1 30 0 1445 259 41 43 chr17 17827412 17828045 -67610435 - L1ME1 LINE L1 -116 6050 5419 3968 178 19 41 chr17 17828045 17828926 -67609554 + L1MA3 LINE L1 5443 6304 -1 30 59 0 0 chr17 17828956 17829007 -67609473 + AT_rich Low_complexity Low_complexity 1 51 0 24 53 0 0 chr17 17829286 17829324 -67609156 + AT_rich Low_complexity Low_complexity 1 38 0 1307 153 4 0 chr17 17829724 17829952 -67608528 + L1MA3 LINE L1 6077 6305 0 1949 128 7 30 chr17 17830041 17830338 -67608142 + AluSc SINE Alu 1 290 -19 22 35 0 0 chr17 17830707 17830736 -67607744 + AT_rich Low_complexity Low_complexity 1 29 0 22 56 0 0 chr17 17831977 17832013 -67606467 + AT_rich Low_complexity Low_complexity 1 36 0 1227 92 82 0 chr17 17832665 17832849 -67605631 - THE1B LTR MaLR -165 199 1 11494 101 4 5 chr17 17832850 17834431 -67604049 - THE1B-int LTR MaLR -1 1579 1 1927 122 49 35 chr17 17834440 17834784 -67603696 - THE1B LTR MaLR -15 349 1 210 37 0 0 chr17 17834836 17834863 -67603617 + (TG)n Simple_repeat Simple_repeat 1 27 0 2348 90 0 10 chr17 17835091 17835392 -67603088 - AluSp SINE Alu -15 298 1 225 169 85 0 chr17 17835996 17836055 -67602425 + LTR66 LTR ERVL 376 439 -171 33 56 0 0 chr17 17836262 17836316 -67602164 + AT_rich Low_complexity Low_complexity 1 54 0 1838 184 0 0 chr17 17837273 17837572 -67600908 + AluSx SINE Alu 1 299 -13 191 296 93 0 chr17 17838096 17838150 -67600330 + L3b LINE CR1 1278 1336 -247 1053 128 26 0 chr17 17839602 17839758 -67598722 + AluSp SINE Alu 135 294 -19 2413 55 3 0 chr17 17839769 17840062 -67598418 + AluY SINE Alu 1 294 -17 1614 145 65 11 chr17 17840285 17840561 -67597919 + AluSx SINE Alu 14 304 -8 48 67 0 0 chr17 17840811 17840901 -67597579 + AT_rich Low_complexity Low_complexity 1 90 0 1496 248 69 17 chr17 17841700 17842180 -67596300 + MLT1D LTR MaLR 1 505 0 305 278 165 42 chr17 17842193 17842696 -67595784 - L1ME3A LINE L1 -241 5929 5362 476 198 123 14 chr17 18042959 18043168 -67395312 - L1ME3A LINE L1 0 6170 5925 692 289 11 27 chr17 18043191 18043416 -67395064 - L1ME3A LINE L1 -302 5868 5646 455 143 13 0 chr17 18043416 18043493 -67394987 - MER116 DNA Mariner 0 80 3 692 289 11 27 chr17 18043493 18043530 -67394950 - L1ME3A LINE L1 -524 5646 5610 1686 149 4 15 chr17 18046051 18046320 -67392160 + AluJb SINE Alu 1 266 -46 226 292 28 0 chr17 18046622 18046694 -67391786 - MLT1K LTR MaLR -3 585 512 2504 59 0 3 chr17 18047878 18048185 -67390295 - AluY SINE Alu -5 306 1 21 0 0 0 chr17 18048188 18048209 -67390271 + AT_rich Low_complexity Low_complexity 1 21 0 2233 95 0 0 chr17 18050080 18050375 -67388105 - AluY SINE Alu -16 295 1 185 311 14 27 chr17 18050719 18050793 -67387687 - MIR SINE MIR -97 165 93 243 329 40 0 chr17 18051132 18051208 -67387272 - L2 LINE L2 -1 3271 3193 202 320 148 16 chr17 18052014 18052136 -67386344 + MIR3 SINE MIR 15 152 -56 212 286 62 124 chr17 18052657 18052930 -67385550 - L2 LINE L2 -18 3254 2999 251 271 129 0 chr17 18053026 18053096 -67385384 - MIR SINE MIR -81 181 103 293 273 118 35 chr17 18053614 18053800 -67384680 - MIR3 SINE MIR -3 205 2 274 228 114 63 chr17 18054375 18054533 -67383947 - L1ME4a LINE L1 0 6121 5956 188 298 177 32 chr17 18056823 18056981 -67381499 - L3 LINE CR1 -15 1562 1382 187 386 34 0 chr17 18057042 18057130 -67381350 + MIR SINE MIR 60 150 -58 509 230 79 7 chr17 18057203 18057342 -67381138 - L3 LINE CR1 -187 1390 1242 306 356 44 31 chr17 18057457 18057682 -67380798 - L3 LINE CR1 -642 935 708 450 256 142 62 chr17 18058010 18058299 -67380181 + L3b LINE CR1 1116 1427 -156 2233 113 3 0 chr17 18058505 18058815 -67379665 - AluSx SINE Alu -1 311 1 2210 106 0 0 chr17 18059219 18059503 -67378977 + AluSx SINE Alu 1 284 -28 222 37 0 0 chr17 18059508 18059535 -67378945 + (TAAA)n Simple_repeat Simple_repeat 1 27 0 2241 100 3 3 chr17 18059536 18059846 -67378634 + AluY SINE Alu 1 310 -1 193 293 35 0 chr17 18060005 18060063 -67378417 - MIR3 SINE MIR -52 156 97 314 338 21 48 chr17 18060456 18060601 -67377879 + L1MC4 LINE L1 7898 8038 -4 231 295 47 47 chr17 18060601 18060730 -67377750 - L2 LINE L2 -233 3039 2911 2034 147 0 3 chr17 18062095 18062402 -67376078 - AluSx SINE Alu -6 306 1 2269 69 0 3 chr17 18062411 18062701 -67375779 - AluY SINE Alu -22 289 1 191 304 18 0 chr17 18062778 18062834 -67375646 - L2 LINE L2 -79 3193 3137 563 319 18 33 chr17 18063687 18063960 -67374520 + L1ME LINE L1 5532 5800 -321 214 394 38 8 chr17 18065510 18065642 -67372838 - MIR3 SINE MIR -63 145 10 2246 96 10 0 chr17 18067748 18068051 -67370429 + AluSx SINE Alu 1 306 -6 1946 90 26 8 chr17 18068135 18068403 -67370077 + AluSx SINE Alu 25 297 -15 404 259 211 24 chr17 18068415 18068581 -67369899 + MER117 DNA MER1_type 1 197 0 2031 126 0 0 chr17 18068996 18069281 -67369199 + AluSx SINE Alu 19 303 -9 2453 57 0 0 chr17 18069281 18069577 -67368903 + AluY SINE Alu 1 297 -14 1918 152 0 10 chr17 18069621 18069931 -67368549 + AluJo SINE Alu 1 307 -5 1612 163 75 14 chr17 18069943 18070225 -67368255 + AluJb SINE Alu 3 301 -1 194 362 124 37 chr17 18070364 18070582 -67367898 + L2 LINE L2 3077 3313 0 203 302 0 47 chr17 18071970 18072056 -67366424 - MIR SINE MIR -93 115 34 230 349 36 46 chr17 18072466 18072661 -67365819 - MIR SINE MIR -60 202 10 2039 128 0 0 chr17 18073901 18074190 -67364290 - AluSx SINE Alu -23 289 1 2138 107 7 0 chr17 18074414 18074714 -67363766 + AluSp SINE Alu 1 302 -11 1953 98 59 18 chr17 18074790 18074908 -67363572 + AluSg1 SINE Alu 1 113 -196 2266 107 0 0 chr17 18074908 18075206 -67363274 + AluSc SINE Alu 1 298 -11 1953 98 59 18 chr17 18075206 18075373 -67363107 + AluSg1 SINE Alu 113 298 -11 619 168 0 20 chr17 18075373 18075474 -67363006 + FLAM_A SINE Alu 24 122 -20 2291 104 0 0 chr17 18076536 18076834 -67361646 + AluSc SINE Alu 1 298 -11 1927 141 0 30 chr17 18078956 18079292 -67359188 + AluSx SINE Alu 1 327 0 327 356 13 10 chr17 18079299 18079434 -67359046 - MIR3 SINE MIR -5 203 63 237 200 108 0 chr17 18079871 18079936 -67358544 - MIR3 SINE MIR -23 185 114 244 264 73 36 chr17 18080022 18080132 -67358348 - MIR SINE MIR -74 134 21 2328 90 3 0 chr17 18080896 18081206 -67357274 - AluSp SINE Alu -2 311 1 219 103 0 0 chr17 18083271 18083310 -67355170 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 359 309 40 27 chr17 18083987 18084136 -67354344 - MIR3 SINE MIR -55 153 3 248 349 89 12 chr17 18085063 18085278 -67353202 - MIR SINE MIR -20 242 9 917 146 0 7 chr17 18090302 18090453 -67348027 - L1MB8 LINE L1 0 6178 6029 274 248 62 54 chr17 18090740 18090884 -67347596 - MIR3 SINE MIR -35 173 25 193 281 157 0 chr17 18091393 18091482 -67346998 - L2 LINE L2 -21 3251 3149 199 308 15 0 chr17 18091939 18092004 -67346476 + MIR SINE MIR 78 143 -119 24 0 0 0 chr17 18093133 18093157 -67345323 + GC_rich Low_complexity Low_complexity 1 24 0 480 241 120 44 chr17 18093276 18093434 -67345046 + MIR SINE MIR 80 249 -13 1946 151 0 0 chr17 18093924 18094246 -67344234 + AluSx SINE Alu 1 322 0 2007 115 11 4 chr17 18094251 18094562 -67343918 + AluSx SINE Alu 1 313 0 291 276 58 0 chr17 18094637 18094724 -67343756 - MIR SINE MIR -113 149 58 257 125 0 0 chr17 18095291 18095331 -67343149 - L3 LINE CR1 -112 1465 1426 264 264 81 26 chr17 18095830 18095988 -67342492 - MIR SINE MIR -63 145 19 186 269 0 0 chr17 18096072 18096124 -67342356 - MIR SINE MIR -76 132 81 195 289 201 29 chr17 18097388 18097627 -67340853 - L2 LINE L2 -225 3088 2809 239 333 91 15 chr17 18098231 18098363 -67340117 + MIR3 SINE MIR 3 144 -64 207 0 0 0 chr17 18098432 18098455 -67340025 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2003 69 0 0 chr17 18098457 18098704 -67339776 - AluY SINE Alu -64 247 1 278 256 50 16 chr17 18098962 18099047 -67339433 - L1ME4a LINE L1 0 6121 6029 1665 168 18 3 chr17 18099047 18099333 -67339147 + AluJo SINE Alu 1 290 -22 278 256 50 16 chr17 18099333 18099368 -67339112 - L1ME4a LINE L1 -92 6029 5997 189 0 0 0 chr17 18099388 18099409 -67339071 + (TC)n Simple_repeat Simple_repeat 2 22 0 1786 124 50 7 chr17 18099454 18099736 -67338744 - AluSx SINE Alu -18 294 1 472 286 84 5 chr17 18099745 18099948 -67338532 - L1MB7 LINE L1 0 6184 5966 228 135 0 0 chr17 18099949 18099986 -67338494 + (TA)n Simple_repeat Simple_repeat 2 38 0 2423 62 10 3 chr17 18099986 18100295 -67338185 - AluY SINE Alu 0 311 1 350 390 16 37 chr17 18100399 18100486 -67337994 - L1MB7 LINE L1 -347 5774 5687 2490 64 0 3 chr17 18100486 18100798 -67337682 - AluY SINE Alu 0 311 1 350 390 16 37 chr17 18100798 18100897 -67337583 - L1MB7 LINE L1 -434 5687 5592 681 251 142 5 chr17 18101121 18101332 -67337148 - MIR SINE MIR -10 252 13 368 280 166 6 chr17 18102936 18103093 -67335387 + MIR SINE MIR 81 262 0 728 184 7 29 chr17 18103109 18103245 -67335235 + FLAM_C SINE Alu 1 133 -10 218 241 17 52 chr17 18103249 18103307 -67335173 + MIR SINE MIR 199 254 -8 1860 131 37 20 chr17 18103499 18103796 -67334684 + AluJo SINE Alu 2 303 -9 300 288 0 0 chr17 18104134 18104200 -67334280 + L1MC4 LINE L1 6638 6703 -1339 261 0 0 0 chr17 18104202 18104231 -67334249 + (TA)n Simple_repeat Simple_repeat 1 29 0 2162 106 0 0 chr17 18104231 18104513 -67333967 - AluSc SINE Alu -15 294 13 1624 200 7 0 chr17 18104514 18104804 -67333676 - AluJo SINE Alu -20 292 1 209 304 160 28 chr17 18105130 18105311 -67333169 - L2 LINE L2 -238 3034 2830 267 283 75 19 chr17 18105658 18105764 -67332716 + MIR SINE MIR 20 131 -131 356 225 196 0 chr17 18106257 18106430 -67332050 + L2 LINE L2 2867 3073 -240 188 222 0 0 chr17 18106432 18106468 -67332012 + L2 LINE L2 3262 3297 -16 255 196 18 0 chr17 18107070 18107126 -67331354 + MER96 DNA MER1_type? 119 175 0 241 321 89 18 chr17 18107163 18107275 -67331205 - L3 LINE CR1 -96 1481 1362 2251 84 3 29 chr17 18107527 18107838 -67330642 + AluSx SINE Alu 6 308 -4 1630 109 26 0 chr17 18109103 18109332 -67329148 - AluSg SINE Alu -75 235 1 205 333 163 41 chr17 18109332 18109455 -67329025 + MER5B DNA MER1_type 41 178 0 2139 123 0 7 chr17 18110682 18110984 -67327496 - AluSx SINE Alu 0 312 13 2191 111 0 7 chr17 18110999 18111305 -67327175 - AluSq SINE Alu -9 304 1 615 271 122 18 chr17 18112154 18112526 -67325954 - L1MC4a LINE L1 -104 6017 5624 252 339 77 15 chr17 18112875 18113005 -67325475 + MIR3 SINE MIR 4 141 -67 2339 90 0 0 chr17 18113010 18113311 -67325169 + AluSg SINE Alu 1 301 -9 500 318 46 15 chr17 18113313 18113508 -67324972 - MIR SINE MIR -5 257 57 346 298 106 14 chr17 18115347 18115488 -67322992 + MIR SINE MIR 89 242 -20 254 308 62 72 chr17 18115602 18115797 -67322683 + MIR SINE MIR 66 258 -4 552 316 68 46 chr17 18116175 18116232 -67322248 - MIR SINE MIR 0 262 208 465 66 0 0 chr17 18116238 18116299 -67322181 + (TATG)n Simple_repeat Simple_repeat 4 64 0 2042 134 3 0 chr17 18116299 18116584 -67321896 - AluSx SINE Alu -23 289 1 552 316 68 46 chr17 18116584 18116763 -67321717 - MIR SINE MIR -54 208 21 426 263 29 64 chr17 18117948 18118119 -67320361 - L2 LINE L2 -208 3064 2900 1230 197 78 7 chr17 18118120 18118568 -67319912 - MLT1F1 LTR MaLR 0 567 3 185 353 133 0 chr17 18118616 18118766 -67319714 - L2 LINE L2 -454 2860 2691 243 319 17 42 chr17 18119039 18119158 -67319322 - MIR3 SINE MIR -53 155 40 199 307 80 23 chr17 18119358 18119446 -67319034 - MIR SINE MIR -122 140 48 245 291 154 43 chr17 18119578 18119695 -67318785 + MIR SINE MIR 17 146 -62 424 335 51 6 chr17 18119714 18119890 -67318590 + MIR SINE MIR 3 186 -76 309 51 0 0 chr17 18120618 18120657 -67317823 + (TG)n Simple_repeat Simple_repeat 1 39 0 245 289 133 0 chr17 18120775 18120865 -67317615 + L2 LINE L2 3171 3272 0 219 339 73 0 chr17 18120919 18121028 -67317452 + MIR SINE MIR 3 119 -143 379 356 49 49 chr17 18122978 18123326 -67315154 - L2 LINE L2 -49 3264 2917 211 322 56 7 chr17 18123560 18123703 -67314777 + (CCCCAG)n Simple_repeat Simple_repeat 5 154 0 232 279 257 7 chr17 18124161 18124297 -67314183 - MIR3 SINE MIR -18 190 21 197 266 78 0 chr17 18127819 18127883 -67310597 + MIR3 SINE MIR 109 177 -31 618 163 62 47 chr17 18128623 18128752 -67309728 + FLAM_C SINE Alu 1 131 -2 250 85 21 21 chr17 18130608 18130655 -67307825 + (TA)n Simple_repeat Simple_repeat 2 48 0 265 344 45 40 chr17 18133657 18133881 -67304599 + L2 LINE L2 3086 3310 -3 286 274 74 21 chr17 18133917 18134012 -67304468 + MIR SINE MIR 107 206 -56 1833 147 4 0 chr17 18134026 18134298 -67304182 + AluJb SINE Alu 9 281 -31 746 9 60 26 chr17 18134301 18134417 -67304063 + (TAAAA)n Simple_repeat Simple_repeat 5 124 0 775 271 147 0 chr17 18135857 18136130 -67302350 + MLT1H LTR MaLR 39 351 -198 258 268 0 0 chr17 18136533 18136589 -67301891 + L2 LINE L2 3004 3059 -213 419 310 26 0 chr17 18137474 18137587 -67300893 - MIR SINE MIR -65 197 82 2208 93 0 0 chr17 18137604 18137932 -67300548 + AluSc SINE Alu 1 309 0 869 206 7 0 chr17 18137947 18138102 -67300378 + AluJb SINE Alu 142 297 -15 183 377 0 0 chr17 18138211 18138272 -67300208 + MIR SINE MIR 89 149 -113 212 265 20 0 chr17 18138312 18138361 -67300119 + L2 LINE L2 3264 3313 0 1678 139 45 14 chr17 18139079 18139392 -67299088 + AluJb SINE Alu 1 312 0 2129 124 0 7 chr17 18139656 18139963 -67298517 - AluSx SINE Alu -7 305 1 2432 63 0 0 chr17 18139970 18140270 -67298210 - AluY SINE Alu -11 300 1 238 207 52 17 chr17 18140283 18140341 -67298139 - MIR SINE MIR -86 176 117 321 261 254 0 chr17 18140811 18140941 -67297539 - MIR SINE MIR -24 238 76 196 261 87 0 chr17 18141314 18141383 -67297097 - MIR SINE MIR -85 177 103 226 323 43 0 chr17 18141843 18141922 -67296558 - MIR SINE MIR -104 104 31 187 321 76 30 chr17 18142337 18142574 -67295906 - L2 LINE L2 -1460 1854 1607 214 162 0 0 chr17 18142574 18142611 -67295869 + GA-rich Low_complexity Low_complexity 1 37 0 218 356 48 0 chr17 18143484 18143588 -67294892 - MIR SINE MIR -74 188 80 369 0 0 0 chr17 18148948 18148989 -67289491 + (CTG)n Simple_repeat Simple_repeat 1 41 0 268 80 0 40 chr17 18149849 18149899 -67288581 + (GGGA)n Simple_repeat Simple_repeat 4 51 0 22 0 0 0 chr17 18150172 18150194 -67288286 + GC_rich Low_complexity Low_complexity 1 22 0 297 128 0 0 chr17 18150420 18150467 -67288013 + (CA)n Simple_repeat Simple_repeat 1 47 0 276 295 0 27 chr17 18151264 18151376 -67287104 + GA-rich Low_complexity Low_complexity 3 111 0 219 69 0 0 chr17 18152664 18152693 -67285787 + (GGCTG)n Simple_repeat Simple_repeat 3 31 0 257 224 17 0 chr17 18153990 18154048 -67284432 + GA-rich Low_complexity Low_complexity 6 64 0 1746 84 133 0 chr17 18155697 18155975 -67282505 - AluSp SINE Alu 0 311 1 201 191 21 21 chr17 18156105 18156152 -67282328 + MIR SINE MIR 67 113 -95 * 408 261 235 41 chr17 18156141 18156409 -67282071 + L2 LINE L2 2946 3265 -48 288 243 21 111 chr17 18156581 18156816 -67281664 - Charlie8 DNA MER1_type -2138 279 66 290 322 107 8 chr17 18157279 18157400 -67281080 + L2 LINE L2 3180 3312 -1 224 261 57 89 chr17 18158192 18158349 -67280131 - MIR3 SINE MIR -29 179 28 207 254 0 0 chr17 18158731 18158794 -67279686 + GA-rich Low_complexity Low_complexity 1 63 0 24 0 0 0 chr17 18160279 18160303 -67278177 + GC_rich Low_complexity Low_complexity 1 24 0 21 36 0 0 chr17 18160577 18160605 -67277875 + GC_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr17 18160791 18160815 -67277665 + GC_rich Low_complexity Low_complexity 1 24 0 208 300 40 20 chr17 18162099 18162199 -67276281 - MIR SINE MIR -60 148 88 2097 113 3 3 chr17 18162392 18162683 -67275797 + AluSq SINE Alu 1 291 -22 2267 66 7 10 chr17 18162685 18162986 -67275494 + AluY SINE Alu 3 302 -9 474 284 111 24 chr17 18164187 18164395 -67274085 + MIR SINE MIR 29 254 -8 220 322 44 0 chr17 18164621 18164711 -67273769 - MER5A DNA MER1_type -80 109 16 240 220 44 99 chr17 18164954 18165045 -67273435 + MIR3 SINE MIR 81 166 -42 406 297 174 0 chr17 18165224 18165379 -67273101 - MIR SINE MIR -31 231 50 315 318 16 16 chr17 18165454 18165580 -67272900 + L1MC4a LINE L1 5495 5620 -2188 237 263 140 64 chr17 18165592 18165793 -67272687 + L1MC4a LINE L1 5680 5864 -1944 1825 148 20 3 chr17 18165793 18166097 -67272383 + AluJo SINE Alu 1 309 -3 1824 134 54 0 chr17 18166100 18166377 -67272103 + AluSx SINE Alu 1 292 -20 237 263 140 64 chr17 18166377 18166407 -67272073 + L1MC4a LINE L1 5865 5933 -1875 279 265 145 16 chr17 18166470 18166594 -67271886 + MIR SINE MIR 7 145 -63 218 163 47 0 chr17 18166660 18166703 -67271777 - MIR SINE MIR -60 148 104 1364 125 125 18 chr17 18166950 18167231 -67271249 + Tigger2 DNA MER2_type 2270 2580 -138 1616 187 4 0 chr17 18167253 18167521 -67270959 + AluJb SINE Alu 1 269 -43 453 315 13 34 chr17 18168167 18168316 -67270164 + MIR SINE MIR 67 212 -50 402 199 0 0 chr17 18168384 18168474 -67270006 - MIR SINE MIR -52 156 66 35 24 0 0 chr17 18168538 18168580 -67269900 + AT_rich Low_complexity Low_complexity 1 42 0 207 356 123 14 chr17 18168888 18169034 -67269446 - MIR SINE MIR -74 188 27 538 193 21 0 chr17 18169343 18169488 -67268992 + (TCCA)n Simple_repeat Simple_repeat 1 148 0 283 328 34 0 chr17 18169488 18169607 -67268873 + (CCCA)n Simple_repeat Simple_repeat 1 123 0 315 330 166 27 chr17 18169607 18170320 -67268160 - L2 LINE L2 0 3272 2425 234 0 0 0 chr17 18171204 18171230 -67267250 + (TGGA)n Simple_repeat Simple_repeat 3 28 0 729 250 17 11 chr17 18174096 18174272 -67264208 - MER45A DNA AcHobo -1 177 1 185 360 40 30 chr17 18174305 18174405 -67264075 - MIR SINE MIR -21 241 141 294 317 248 6 chr17 18174423 18174584 -67263896 - MIR SINE MIR -14 248 49 315 309 8 57 chr17 18174859 18175102 -67263378 + L1ME4a LINE L1 5824 6093 -28 638 122 143 0 chr17 18177348 18177446 -67261034 - FLAM_C SINE Alu -22 121 10 434 228 81 0 chr17 18177462 18177585 -67260895 + L1ME3A LINE L1 5734 5866 -304 870 117 70 0 chr17 18177599 18177727 -67260753 + AluSq/x SINE Alu 1 137 -175 1866 152 30 0 chr17 18177730 18178027 -67260453 + AluSx SINE Alu 6 311 -1 620 202 84 17 chr17 18178076 18178254 -67260226 + L1ME3A LINE L1 5981 6170 0 203 300 43 0 chr17 18178255 18178325 -67260155 + L2 LINE L2 2701 2773 -541 368 343 122 0 chr17 18178439 18178710 -67259770 + MLT1I LTR MaLR 98 401 -8 245 276 79 0 chr17 18179898 18179974 -67258506 - MIR SINE MIR -86 122 41 550 277 171 28 chr17 18180068 18180389 -67258091 + L2 LINE L2 2827 3193 -79 195 314 149 35 chr17 18180842 18181103 -67257377 + L2 LINE L2 2966 3256 -16 832 247 31 26 chr17 18181248 18181475 -67257005 - MIR SINE MIR -3 259 32 214 343 112 15 chr17 18182324 18182458 -67256022 + L2 LINE L2 3126 3272 0 269 328 16 49 chr17 18182673 18182795 -67255685 - L2 LINE L2 -5 3308 3191 339 293 143 62 chr17 18182846 18183105 -67255375 + L1ME4a LINE L1 5834 6113 -8 188 333 0 0 chr17 18183377 18183434 -67255046 + MIR SINE MIR 91 147 -61 * 271 362 162 10 chr17 18183411 18183912 -67254568 + L2 LINE L2 2669 3251 -21 207 279 0 49 chr17 18184510 18184571 -67253909 - MIR3 SINE MIR -52 156 99 359 304 67 7 chr17 18185711 18185846 -67252634 + L2 LINE L2 3162 3304 -9 2181 94 7 0 chr17 18185997 18186294 -67252186 + AluSp SINE Alu 2 300 -13 193 273 50 93 chr17 18187270 18187431 -67251049 - L2 LINE L2 -89 3183 3030 224 254 0 16 chr17 18187554 18187617 -67250863 + MIR SINE MIR 96 157 -105 1761 111 26 102 chr17 18187956 18188300 -67250180 + AluYb8 SINE Alu 1 318 0 237 274 0 0 chr17 18188395 18188446 -67250034 - MER91A DNA MER1_type -144 52 2 244 320 72 61 chr17 18188739 18188920 -67249560 + MER5A DNA MER1_type 7 189 0 194 175 25 0 chr17 18189535 18189575 -67248905 - L2 LINE L2 -7 3265 3225 22 0 0 0 chr17 18190036 18190058 -67248422 + GC_rich Low_complexity Low_complexity 1 22 0 206 155 14 84 chr17 18190091 18190162 -67248318 + (CCCCG)n Simple_repeat Simple_repeat 2 67 0 24 0 0 0 chr17 18190272 18190296 -67248184 + GC_rich Low_complexity Low_complexity 1 24 0 666 272 72 96 chr17 18190435 18190894 -67247586 - L2 LINE L2 0 3313 2866 383 220 101 9 chr17 18191154 18191263 -67247217 + L2 LINE L2 2926 3044 -228 2026 72 118 0 chr17 18191773 18192052 -67246428 - AluSp SINE Alu -1 312 1 564 227 45 0 chr17 18192277 18192409 -67246071 + MLT1J2 LTR MaLR 24 161 -289 430 280 6 64 chr17 18192603 18192760 -67245720 - L2 LINE L2 0 3313 3166 201 298 35 26 chr17 18192804 18192918 -67245562 - L2 LINE L2 -337 2977 2863 223 252 23 28 chr17 18192926 18193039 -67245441 + MIR SINE MIR 101 211 -51 328 348 32 19 chr17 18193890 18194048 -67244432 + MIR SINE MIR 91 250 -12 229 219 0 208 chr17 18194098 18194290 -67244190 + L2 LINE L2 3028 3179 -93 432 133 48 12 chr17 18194352 18194435 -67244045 + THE1A LTR MaLR 194 279 -76 * 1755 150 7 4 chr17 18194435 18194709 -67243771 - AluJb SINE Alu -37 275 1 691 135 183 29 chr17 18194709 18194908 -67243572 + LTR8A LTR ERV1 349 583 -144 2501 70 3 0 chr17 18195557 18195869 -67242611 + AluSp SINE Alu 1 313 0 249 264 134 73 chr17 18196618 18196795 -67241685 + L2 LINE L2 2545 2710 -604 1577 99 149 11 chr17 18196795 18197057 -67241423 + AluSg1 SINE Alu 1 298 -11 228 35 0 0 chr17 18197057 18197086 -67241394 + (CA)n Simple_repeat Simple_repeat 2 30 0 249 264 134 73 chr17 18197086 18197153 -67241327 + L2 LINE L2 2709 2805 -509 2413 70 3 13 chr17 18197672 18197985 -67240495 - AluSg SINE Alu 0 310 1 202 346 20 20 chr17 18198701 18198802 -67239678 - MER5A DNA MER1_type -42 147 47 1589 171 0 4 chr17 18199235 18199498 -67238982 + AluJb SINE Alu 34 295 -17 462 65 0 0 chr17 18200014 18200076 -67238404 + (TTCA)n Simple_repeat Simple_repeat 1 62 0 212 209 0 0 chr17 18200138 18200181 -67238299 - L2 LINE L2 -1 3312 3270 257 228 0 0 chr17 18250230 18250287 -67188193 - L2 LINE L2 -215 3057 3001 2019 141 16 10 chr17 18250681 18250807 -67187673 + AluJb SINE Alu 2 126 -231 225 0 0 0 chr17 18250807 18250832 -67187648 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 2019 141 16 10 chr17 18250832 18251059 -67187421 + AluJb SINE Alu 126 357 0 420 20 0 0 chr17 18251158 18251207 -67187273 + (CA)n Simple_repeat Simple_repeat 2 50 0 301 240 70 20 chr17 18251484 18251584 -67186896 - MIR3 SINE MIR -46 162 58 227 247 51 4 chr17 18251748 18251816 -67186664 - MIR SINE MIR -47 161 92 196 310 87 43 chr17 18251875 18252048 -67186432 + MIR SINE MIR 30 211 -51 1397 165 0 119 chr17 18252326 18252653 -67185827 - AluSc SINE Alu -21 288 1 1787 212 7 30 chr17 18252968 18253008 -67185472 + MSTD LTR MaLR 1 40 -356 2042 163 0 0 chr17 18253008 18253321 -67185159 - AluSq SINE Alu 0 313 1 1787 212 7 30 chr17 18253321 18253685 -67184795 + MSTD LTR MaLR 40 396 0 576 272 73 27 chr17 18254231 18254535 -67183945 + MLT1K LTR MaLR 1 511 0 663 222 101 5 chr17 18254603 18254792 -67183688 + MLT1K LTR MaLR 374 580 -8 444 274 133 33 chr17 18254812 18255053 -67183427 + L3 LINE CR1 1209 1473 -104 250 267 12 47 chr17 18255657 18255743 -67182737 + MIR SINE MIR 180 262 0 501 303 48 68 chr17 18256022 18256359 -67182121 + L2 LINE L2 2870 3199 -73 292 284 29 0 chr17 18256398 18256500 -67181980 - MIR SINE MIR -42 220 116 747 207 67 31 chr17 18256505 18256898 -67181582 - MLT1D LTR MaLR 0 505 19 181 233 0 0 chr17 18256924 18256967 -67181513 - MIR SINE MIR -188 74 32 223 306 126 0 chr17 18257352 18257463 -67181017 - MIR SINE MIR -21 241 117 279 264 0 0 chr17 18257834 18257963 -67180517 + G-rich Low_complexity Low_complexity 4 132 0 225 154 0 0 chr17 18258619 18258658 -67179822 + (TG)n Simple_repeat Simple_repeat 1 39 0 618 265 225 14 chr17 18258745 18259468 -67179012 - L2 LINE L2 0 3313 2434 285 340 51 6 chr17 18260191 18260347 -67178133 + MIR SINE MIR 20 182 -80 1019 257 74 43 chr17 18260697 18261184 -67177296 + MLT1D LTR MaLR 3 504 -1 2387 97 3 6 chr17 18261589 18261900 -67176580 - AluSx SINE Alu -2 310 1 333 247 0 0 chr17 18262181 18262262 -67176218 - MER3 DNA MER1_type 0 209 129 189 0 0 0 chr17 18262262 18262283 -67176197 + (TG)n Simple_repeat Simple_repeat 2 22 0 2103 116 0 4 chr17 18262291 18262566 -67175914 - AluSg SINE Alu -36 274 1 202 243 68 27 chr17 18262716 18262790 -67175690 - MIR SINE MIR -58 150 74 311 350 56 12 chr17 18262990 18263150 -67175330 + MIR SINE MIR 88 254 -8 337 248 161 15 chr17 18263301 18263438 -67175042 + MLT1K LTR MaLR 321 477 -111 295 316 103 26 chr17 18263495 18263612 -67174868 - L3 LINE CR1 -39 1538 1413 429 289 0 39 chr17 18263741 18263944 -67174536 + MIR SINE MIR 40 233 -29 222 225 31 39 chr17 18264292 18264421 -67174059 + (TG)n Simple_repeat Simple_repeat 2 129 0 185 226 172 11 chr17 18264485 18264578 -67173902 + MIR SINE MIR 45 152 -56 466 262 200 23 chr17 18264639 18265024 -67173456 - L2 LINE L2 -6 3307 2855 1135 258 5 15 chr17 18265074 18265170 -67173310 + L1ME1 LINE L1 5728 5823 -343 2347 95 7 0 chr17 18265170 18265466 -67173014 + AluSp SINE Alu 1 298 -15 1135 258 5 15 chr17 18265466 18265759 -67172721 + L1ME1 LINE L1 5823 6159 -7 2414 101 0 9 chr17 18265940 18266256 -67172224 - AluSq SINE Alu 0 313 1 306 180 0 0 chr17 18266380 18266441 -67172039 + (TG)n Simple_repeat Simple_repeat 1 61 0 649 259 82 27 chr17 18266513 18266807 -67171673 + MLT1I LTR MaLR 35 344 -65 5674 151 43 18 chr17 18266822 18267149 -67171331 - L1MC1 LINE L1 0 6333 6016 2314 108 3 3 chr17 18267149 18267454 -67171026 - AluSg SINE Alu -5 305 1 5674 151 43 18 chr17 18267454 18267851 -67170629 - L1MC1 LINE L1 -317 6016 5630 1386 181 23 85 chr17 18267851 18268250 -67170230 - MLT1A2 LTR MaLR 0 374 1 5674 151 43 18 chr17 18268250 18268498 -67169982 - L1MC1 LINE L1 -703 5630 5390 690 198 0 0 chr17 18268498 18268624 -67169856 - FLAM_A SINE Alu -4 129 4 5674 151 43 18 chr17 18268624 18268875 -67169605 - L1MC1 LINE L1 -943 5390 5082 1815 154 0 11 chr17 18268898 18269177 -67169303 - AluJo SINE Alu -24 288 13 1871 124 44 7 chr17 18269213 18269486 -67168994 + AluSx SINE Alu 1 283 -29 250 302 35 0 chr17 18269596 18269682 -67168798 - LTR67 LTR ERVL -373 184 96 340 164 148 82 chr17 18269985 18270107 -67168373 + MLT1C LTR MaLR 1 130 -337 691 117 28 151 chr17 18270111 18270290 -67168190 + FRAM SINE Alu 20 176 0 631 213 63 31 chr17 18270295 18270545 -67167935 + MLT1C LTR MaLR 171 467 0 416 159 0 0 chr17 18270554 18270623 -67167857 + MSTB LTR MaLR 1 69 -357 2019 159 0 3 chr17 18270623 18270924 -67167556 + AluJo SINE Alu 1 300 -12 195 69 0 0 chr17 18271095 18271124 -67167356 + (TA)n Simple_repeat Simple_repeat 1 29 0 2494 46 0 0 chr17 18271126 18271433 -67167047 - AluY SINE Alu 0 307 1 180 0 0 0 chr17 18271447 18271467 -67167013 + (CA)n Simple_repeat Simple_repeat 2 21 0 189 0 0 0 chr17 18271467 18271488 -67166992 + (TG)n Simple_repeat Simple_repeat 1 21 0 802 191 31 13 chr17 18271500 18271766 -67166714 + MSTB LTR MaLR 55 362 -64 200 94 0 31 chr17 18271766 18271798 -67166682 + (TCCC)n Simple_repeat Simple_repeat 1 31 0 752 121 13 25 chr17 18271798 18271955 -67166525 + (TTTC)n Simple_repeat Simple_repeat 4 158 0 2259 83 4 0 chr17 18271955 18272231 -67166249 - AluSp SINE Alu -36 277 1 461 72 14 0 chr17 18272231 18272300 -67166180 + MSTB LTR MaLR 363 432 0 8163 174 7 25 chr17 18272302 18272667 -67165813 + MSTB-int LTR MaLR 5 375 -1276 2043 152 10 0 chr17 18272667 18272970 -67165510 - AluJb SINE Alu -6 306 1 8163 174 7 25 chr17 18272970 18273294 -67165186 + MSTB-int LTR MaLR 375 704 -947 2226 109 0 0 chr17 18273294 18273587 -67164893 + AluSx SINE Alu 20 312 0 8163 174 7 25 chr17 18273587 18274389 -67164091 + MSTB-int LTR MaLR 704 1469 -182 336 176 0 0 chr17 18274389 18274440 -67164040 - Alu SINE Alu -248 51 1 1320 148 43 4 chr17 18274443 18274673 -67163807 + MSTB1 LTR MaLR 179 417 -15 310 335 0 66 chr17 18274817 18274869 -67163611 + LTR16B LTR ERVL 323 377 -87 2396 94 10 3 chr17 18274869 18275177 -67163303 - AluSq SINE Alu -3 310 1 310 335 0 66 chr17 18275177 18275276 -67163204 + LTR16B LTR ERVL 377 464 0 2192 249 86 66 chr17 18275276 18275404 -67163076 - HAL1 LINE L1 -345 2162 2038 252 0 0 0 chr17 18275404 18275432 -67163048 + (GTTTG)n Simple_repeat Simple_repeat 3 30 0 2192 249 86 66 chr17 18275432 18275866 -67162614 - HAL1 LINE L1 -469 2038 1614 1958 144 20 34 chr17 18275866 18275899 -67162581 - MER7A DNA MER2_type -2692 346 314 2821 10 0 0 chr17 18275899 18276218 -67162262 + AluY SINE Alu 1 319 0 1958 144 20 34 chr17 18276218 18276536 -67161944 - MER7A DNA MER2_type -2724 314 1 2192 249 86 66 chr17 18276536 18276847 -67161633 - HAL1 LINE L1 -893 1614 1311 2505 81 0 3 chr17 18276847 18277154 -67161326 - AluY SINE Alu -5 306 1 2192 249 86 66 chr17 18277154 18277288 -67161192 - HAL1 LINE L1 -1196 1311 1129 2222 131 10 0 chr17 18277288 18277594 -67160886 - AluSg SINE Alu -1 309 1 2192 249 86 66 chr17 18277594 18277637 -67160843 - HAL1 LINE L1 -1378 1129 1088 37 52 0 0 chr17 18277691 18277749 -67160731 + AT_rich Low_complexity Low_complexity 1 58 0 478 167 37 9 chr17 18277754 18277862 -67160618 - HAL1 LINE L1 -1433 1074 964 1584 173 0 64 chr17 18277879 18278191 -67160289 - AluJo SINE Alu -20 292 1 2217 128 0 0 chr17 18278301 18278606 -67159874 + AluSq SINE Alu 1 305 -8 303 222 69 0 chr17 18278612 18278684 -67159796 - HAL1 LINE L1 -1581 926 850 1888 204 19 0 chr17 18278731 18279108 -67159372 - MLT1B LTR MaLR -6 384 1 208 325 34 45 chr17 18279118 18279386 -67159094 + L2 LINE L2 1831 2095 -1219 1968 165 0 0 chr17 18279517 18279808 -67158672 + AluJb SINE Alu 5 295 -17 326 290 0 10 chr17 18279810 18279910 -67158570 + MER5A DNA MER1_type 63 161 -28 841 278 48 0 chr17 18279937 18280164 -67158316 - MIR SINE MIR 0 262 25 238 302 19 38 chr17 18280535 18280694 -67157786 + C-rich Low_complexity Low_complexity 6 161 0 2297 85 16 31 chr17 18281030 18281347 -67157133 - AluSx SINE Alu 0 312 1 2822 174 82 62 chr17 18281358 18281685 -67156795 - L1MB5 LINE L1 0 6174 5855 2344 90 3 10 chr17 18281685 18281986 -67156494 - AluSq SINE Alu -14 299 1 2822 174 82 62 chr17 18281986 18282011 -67156469 - L1MB5 LINE L1 -319 5855 5832 2072 123 3 7 chr17 18282011 18282326 -67156154 + AluSq SINE Alu 1 313 0 2822 174 82 62 chr17 18282326 18282700 -67155780 - L1MB5 LINE L1 -342 5832 5432 196 364 0 0 chr17 18282702 18282768 -67155712 + L2 LINE L2 2989 3054 -218 254 228 130 0 chr17 18283285 18283377 -67155103 + MIR SINE MIR 37 140 -68 1367 172 17 92 chr17 18283416 18283765 -67154715 - MLT1B LTR MaLR 0 390 68 1137 185 64 54 chr17 18283777 18283987 -67154493 - MER2 DNA MER2_type -28 317 111 207 0 0 0 chr17 18283987 18284010 -67154470 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2242 108 0 0 chr17 18284012 18284298 -67154182 - AluSq SINE Alu -27 286 1 1137 185 64 54 chr17 18284298 18284397 -67154083 - MER2 DNA MER2_type -234 111 2 328 125 0 18 chr17 18284397 18284447 -67154033 - MLT1B LTR MaLR -320 70 22 1798 179 13 19 chr17 18284451 18284763 -67153717 + AluJo SINE Alu 3 312 0 311 133 150 0 chr17 18284780 18284840 -67153640 + LTR16C LTR ERVL 413 481 -10 442 277 8 8 chr17 18285052 18285171 -67153309 - L2 LINE L2 -252 3061 2943 269 240 53 0 chr17 18285445 18285520 -67152960 + L3 LINE CR1 1424 1502 -75 290 224 66 0 chr17 18285942 18286018 -67152462 + MIR SINE MIR 60 140 -68 1662 110 80 67 chr17 18286425 18286724 -67151756 - AluSx SINE Alu -9 303 1 2544 78 0 0 chr17 18286888 18287197 -67151283 - AluY SINE Alu -2 309 1 199 344 96 8 chr17 18287281 18287406 -67151074 - L2 LINE L2 -1 3271 3136 1256 191 73 73 chr17 18287463 18287769 -67150711 - MLT1D LTR MaLR 0 505 197 2281 110 0 13 chr17 18287769 18287941 -67150539 - AluSq SINE Alu -8 305 137 2480 87 0 0 chr17 18287941 18288239 -67150241 - AluSg SINE Alu -12 298 1 2281 110 0 13 chr17 18288239 18288375 -67150105 - AluSq SINE Alu -176 137 1 1256 191 73 73 chr17 18288375 18288508 -67149972 - MLT1D LTR MaLR -307 198 66 862 254 91 53 chr17 18288512 18288721 -67149759 - MSTD LTR MaLR -8 388 157 1621 175 7 34 chr17 18288721 18289018 -67149462 - AluJb SINE Alu -23 289 1 862 254 91 53 chr17 18289018 18289182 -67149298 - MSTD LTR MaLR -239 157 1 5542 213 92 47 chr17 18289183 18289533 -67148947 - MSTC-int LTR MaLR -1 1734 1401 2222 76 0 0 chr17 18289533 18289795 -67148685 - AluSc SINE Alu -45 264 3 5542 213 92 47 chr17 18289795 18290428 -67148052 - MSTC-int LTR MaLR -334 1401 798 2224 103 0 4 chr17 18290428 18290745 -67147735 - AluSg SINE Alu 0 316 1 5542 213 92 47 chr17 18290745 18291416 -67147064 - MSTC-int LTR MaLR -937 798 2 1046 172 88 78 chr17 18291418 18291738 -67146742 - MSTC LTR MaLR 0 428 52 818 141 0 25 chr17 18291762 18291883 -67146597 - FLAM_C SINE Alu -25 118 1 1929 64 64 24 chr17 18291894 18292144 -67146336 - AluY SINE Alu -12 299 40 300 122 20 0 chr17 18292145 18292194 -67146286 - MSTC LTR MaLR -346 50 1 235 231 19 0 chr17 18292200 18292252 -67146228 - MLT1D LTR MaLR -443 62 10 181 209 0 119 chr17 18292341 18292408 -67146072 + L2 LINE L2 3214 3272 0 1969 144 3 10 chr17 18292447 18292746 -67145734 + AluJb SINE Alu 1 297 -15 443 293 33 0 chr17 18293123 18293273 -67145207 + L2 LINE L2 2919 3073 -240 2010 135 7 4 chr17 18293321 18293635 -67144845 + AluSq SINE Alu 1 315 0 3151 153 93 8 chr17 18294512 18295575 -67142905 + LTR12 LTR ERV1 1 714 0 1849 156 3 36 chr17 18295682 18295844 -67142636 - AluSg SINE Alu -18 292 143 1987 130 0 10 chr17 18295844 18296136 -67142344 - AluSx SINE Alu -19 293 5 1849 156 3 36 chr17 18296136 18296275 -67142205 - AluSg SINE Alu -167 143 1 1225 178 20 24 chr17 18296637 18296870 -67141610 + L1MB5 LINE L1 5184 5418 -756 2168 104 17 3 chr17 18296870 18297167 -67141313 + AluSx SINE Alu 1 301 -11 1225 178 20 24 chr17 18297167 18297267 -67141213 + L1MB5 LINE L1 5418 5517 -657 2167 146 0 0 chr17 18297275 18297584 -67140896 + AluSx SINE Alu 1 309 -3 2045 185 28 59 chr17 18297584 18297797 -67140683 + L1MB5 LINE L1 5669 5887 -287 2473 78 0 7 chr17 18297797 18298106 -67140374 + AluSq SINE Alu 2 308 -5 2045 185 28 59 chr17 18298106 18298369 -67140111 + L1MB5 LINE L1 5887 6131 -43 1866 126 81 3 chr17 18298369 18298654 -67139826 + AluJo SINE Alu 1 307 -5 2045 185 28 59 chr17 18298654 18298684 -67139796 + L1MB5 LINE L1 6131 6160 -14 332 392 18 18 chr17 18298684 18298855 -67139625 + L1M4 LINE L1 5232 5402 -744 2361 75 6 43 chr17 18299114 18299436 -67139044 - AluSg SINE Alu 0 310 1 1294 205 6 116 chr17 18299462 18299610 -67138870 + AluSp SINE Alu 1 164 -149 2327 108 0 0 chr17 18299610 18299905 -67138575 + AluSg SINE Alu 1 295 -15 1294 205 6 116 chr17 18299905 18299917 -67138563 + AluSp SINE Alu 164 176 -137 2312 104 0 13 chr17 18299917 18300224 -67138256 + AluSx SINE Alu 1 303 -9 1294 205 6 116 chr17 18300224 18300408 -67138072 + AluSp SINE Alu 176 308 -5 182 262 0 0 chr17 18300812 18300854 -67137626 - MIR SINE MIR -109 153 112 246 319 44 0 chr17 18300909 18301000 -67137480 + MIR3 SINE MIR 93 187 -21 2336 85 7 16 chr17 18301849 18302154 -67136326 + AluSq SINE Alu 7 308 -5 234 136 0 0 chr17 18302165 18302209 -67136271 + (TG)n Simple_repeat Simple_repeat 2 45 0 457 224 26 72 chr17 18302280 18302432 -67136048 - MIR3 SINE MIR -37 171 27 357 346 31 15 chr17 18302962 18303092 -67135388 + MER91C DNA MER1_type 9 140 0 2234 97 19 16 chr17 18303146 18303457 -67135023 - AluSx SINE Alu 0 312 1 269 280 79 9 chr17 18303744 18303958 -67134522 + L2 LINE L2 2380 2608 -706 2232 122 3 0 chr17 18304023 18304326 -67134154 + AluSx SINE Alu 1 304 -8 1996 106 64 0 chr17 18304326 18304614 -67133866 + AluSx SINE Alu 1 305 0 1179 145 92 46 chr17 18304633 18304691 -67133789 + L1MB5 LINE L1 5879 5933 -241 1760 149 45 14 chr17 18304691 18304980 -67133500 + AluJb SINE Alu 1 298 -14 2342 122 0 0 chr17 18304982 18305294 -67133186 + AluSx SINE Alu 1 312 0 1179 145 92 46 chr17 18305294 18305515 -67132965 + L1MB5 LINE L1 5933 6174 0 210 362 28 35 chr17 18305826 18305967 -67132513 + L2 LINE L2 3123 3262 -51 638 135 0 35 chr17 18306198 18306339 -67132141 + (TTCTCC)n Simple_repeat Simple_repeat 4 139 0 2381 107 0 0 chr17 18306343 18306652 -67131828 - AluSx SINE Alu -3 309 1 434 216 155 0 chr17 18306669 18306785 -67131695 - L1MEc LINE L1 -2984 3231 3098 231 43 106 0 chr17 18306787 18306834 -67131646 + CT-rich Low_complexity Low_complexity 1 52 0 2065 153 0 0 chr17 18306834 18307129 -67131351 - AluSx SINE Alu -17 295 1 422 237 13 94 chr17 18307131 18307221 -67131259 - L1MEc LINE L1 -3106 3109 3013 1922 182 3 6 chr17 18307221 18307534 -67130946 - AluJb SINE Alu 0 312 1 422 237 13 94 chr17 18307534 18307558 -67130922 - L1MEc LINE L1 -3202 3013 2989 2059 108 59 0 chr17 18307558 18307845 -67130635 - AluSq SINE Alu -9 304 1 422 237 13 94 chr17 18307845 18308455 -67130025 - L1MEc LINE L1 -3226 2989 2331 2405 106 3 0 chr17 18308455 18308767 -67129713 - AluSp SINE Alu 0 313 1 422 237 13 94 chr17 18308767 18308849 -67129631 - L1MEc LINE L1 -3884 2331 2244 2305 116 0 0 chr17 18308849 18309152 -67129328 + AluSx SINE Alu 1 303 -9 1086 119 30 0 chr17 18309252 18309633 -67128847 + (CACCAT)n Simple_repeat Simple_repeat 1 392 0 606 93 0 0 chr17 18309693 18309779 -67128701 + HY3 scRNA scRNA 14 99 -2 21 0 0 0 chr17 18309779 18309800 -67128680 + AT_rich Low_complexity Low_complexity 1 21 0 185 339 17 0 chr17 18309919 18309978 -67128502 - MIR3 SINE MIR -48 160 101 322 327 72 14 chr17 18310216 18310494 -67127986 + L1M4 LINE L1 3966 4259 -1887 2422 69 13 10 chr17 18310547 18310853 -67127627 + AluY SINE Alu 1 307 -4 896 194 0 0 chr17 18310890 18311050 -67127430 + FRAM SINE Alu 1 160 -6 668 247 186 30 chr17 18311747 18312119 -67126361 - MLT1G LTR MaLR 0 590 161 2163 104 0 0 chr17 18312160 18312468 -67126012 + AluSx SINE Alu 5 312 0 452 355 36 7 chr17 18312513 18312820 -67125660 - MERVL LTR ERVL -1261 4224 3909 853 153 51 0 chr17 18312910 18313087 -67125393 - MER53 DNA DNA -3 186 1 1134 312 109 55 chr17 18313093 18314019 -67124461 - MERVL LTR ERVL -1841 3923 2948 216 111 0 0 chr17 18314028 18314064 -67124416 + (TC)n Simple_repeat Simple_repeat 1 36 0 34 42 0 0 chr17 18314864 18314912 -67123568 + AT_rich Low_complexity Low_complexity 1 48 0 434 305 98 11 chr17 18315135 18315283 -67123197 + L1ME4a LINE L1 5812 5979 -142 2263 131 0 0 chr17 18315283 18315589 -67122891 + AluSx SINE Alu 1 306 -6 434 305 98 11 chr17 18315589 18315614 -67122866 + L1ME4a LINE L1 5979 6000 -121 357 295 0 9 chr17 18315614 18315719 -67122761 - MLT1L LTR MaLR -390 225 122 204 258 0 48 chr17 18316679 18316741 -67121739 + L2 LINE L2 3243 3301 -12 265 325 12 0 chr17 18317123 18317216 -67121264 - MIR SINE MIR -61 147 58 2214 149 3 11 chr17 18317420 18317788 -67120692 - MLT1A1 LTR MaLR 0 365 1 2378 112 0 0 chr17 18318272 18318584 -67119896 - AluSx SINE Alu 0 312 1 1681 176 105 34 chr17 18318777 18318882 -67119598 - MSTB LTR MaLR -48 378 282 2197 136 0 0 chr17 18318882 18319176 -67119304 + AluSx SINE Alu 1 294 -18 1681 176 105 34 chr17 18319176 18319422 -67119058 - MSTB LTR MaLR -144 282 2 325 284 101 0 chr17 18319427 18319536 -67118944 + MIR3 SINE MIR 67 186 -22 1052 178 47 5 chr17 18320518 18320732 -67117748 - AluJo SINE Alu 0 306 85 412 167 0 0 chr17 18320732 18320798 -67117682 - AluSp/q SINE Alu -63 250 185 2414 99 0 13 chr17 18320905 18321219 -67117261 + AluSq SINE Alu 1 310 -3 848 238 22 2 chr17 18322265 18322492 -67115988 - MIR SINE MIR 0 262 34 1292 188 41 10 chr17 18322825 18323056 -67115424 + MER33 DNA MER1_type 1 244 -2341 2148 131 47 0 chr17 18323056 18323354 -67115126 - AluSx SINE Alu 0 312 1 1292 188 41 10 chr17 18323354 18323414 -67115066 + MER33 DNA MER1_type 244 301 -23 275 276 51 0 chr17 18323616 18323714 -67114766 - MIR SINE MIR -148 114 12 231 326 10 20 chr17 18324313 18324411 -67114069 + MIR SINE MIR 51 147 -115 2639 40 3 0 chr17 18325719 18326015 -67112465 + AluSp SINE Alu 1 297 -16 231 260 0 31 chr17 18326355 18326451 -67112029 + (CCG)n Simple_repeat Simple_repeat 2 94 0 314 265 39 0 chr17 18326573 18326675 -67111805 - MIR3 SINE MIR -21 187 82 238 226 81 0 chr17 18326791 18326853 -67111627 + MIR SINE MIR 85 151 -111 1459 147 0 0 chr17 18327248 18327459 -67111021 - AluJb SINE Alu -16 296 86 2338 92 10 0 chr17 18327826 18328121 -67110359 + AluSq SINE Alu 1 298 -15 308 333 8 16 chr17 18328411 18328534 -67109946 + MIR SINE MIR 21 142 -120 329 270 110 0 chr17 18328555 18328680 -67109800 + MIR SINE MIR 44 181 -63 1658 175 87 11 chr17 18328794 18329080 -67109400 + AluJo SINE Alu 4 311 -1 1456 231 127 60 chr17 18329167 18329751 -67108729 + HAL1 LINE L1 265 887 -1620 678 238 24 24 chr17 18329754 18329922 -67108558 + FRAM SINE Alu 1 168 -8 542 272 165 25 chr17 18330709 18331114 -67107366 - L1MC4a LINE L1 -86 6035 5574 393 324 22 11 chr17 18331319 18331501 -67106979 - L1MC/D LINE L1 -1999 5809 5626 374 344 136 34 chr17 18331766 18332289 -67106191 - L1MC/D LINE L1 -898 5248 4673 2525 71 0 0 chr17 18332905 18333201 -67105279 + AluSc SINE Alu 1 296 -13 1083 136 4 110 chr17 18334247 18334475 -67104005 - AluSg/x SINE Alu -5 305 102 511 100 236 143 chr17 18334484 18334624 -67103856 - AluSx SINE Alu -150 162 10 392 286 31 21 chr17 18335233 18335431 -67103049 + L1ME4a LINE L1 5484 5681 -460 4072 129 15 124 chr17 18335431 18336965 -67101515 + pTR5 LTR ERV1 755 2606 0 304 357 54 39 chr17 18337060 18337340 -67101140 + L1ME4a LINE L1 5835 6118 -3 2490 79 10 0 chr17 18337800 18338104 -67100376 + AluSp SINE Alu 1 307 -6 24 32 0 0 chr17 18338731 18338762 -67099718 + AT_rich Low_complexity Low_complexity 1 31 0 2415 80 0 20 chr17 18339402 18339704 -67098776 + AluSx SINE Alu 1 296 -16 332 281 44 0 chr17 18340160 18340274 -67098206 - L2 LINE L2 0 3272 3154 189 292 26 44 chr17 18340293 18340406 -67098074 - L2 LINE L2 -26 3246 3136 263 320 118 17 chr17 18342853 18343031 -67095449 - MIR SINE MIR -2 260 65 24 32 0 0 chr17 18343691 18343722 -67094758 + AT_rich Low_complexity Low_complexity 1 31 0 186 43 0 0 chr17 18344507 18344530 -67093950 + (CCG)n Simple_repeat Simple_repeat 1 23 0 203 59 0 29 chr17 18345575 18345609 -67092871 + (GGCTG)n Simple_repeat Simple_repeat 4 36 0 210 254 17 0 chr17 18347373 18347432 -67091048 + MER91A DNA MER1_type 14 73 -123 1119 111 0 0 chr17 18349501 18349654 -67088826 - AluSg/x SINE Alu -38 274 122 441 244 142 24 chr17 18349655 18349860 -67088620 + L2 LINE L2 2926 3154 -159 2356 78 3 3 chr17 18349929 18350238 -67088242 - AluSc SINE Alu 0 309 1 382 330 103 0 chr17 18350306 18350500 -67087980 - L1ME3 LINE L1 -12 6150 5937 2318 96 0 3 chr17 18350871 18351185 -67087295 + AluSq SINE Alu 1 313 0 2231 229 33 33 chr17 18351197 18351834 -67086646 + L1MB8 LINE L1 5540 6176 -2 216 271 34 59 chr17 18352342 18352460 -67086020 + L2 LINE L2 2929 3043 -270 372 94 0 0 chr17 18352649 18352702 -67085778 + (TGGA)n Simple_repeat Simple_repeat 1 53 0 207 0 0 0 chr17 18353472 18353495 -67084985 + (CTGGGG)n Simple_repeat Simple_repeat 6 28 0 256 100 20 20 chr17 18356456 18356506 -67081974 + (GGGA)n Simple_repeat Simple_repeat 4 53 0 185 252 163 8 chr17 18357244 18357367 -67081113 - L2 LINE L2 -192 3080 2939 600 293 39 14 chr17 18358221 18358429 -67080051 + MER58 DNA MER1_type 56 268 -73 195 186 0 0 chr17 18361038 18361081 -67077399 + C-rich Low_complexity Low_complexity 6 48 0 434 313 42 6 chr17 18362092 18362258 -67076222 - Charlie8 DNA MER1_type -2244 173 2 2033 110 48 0 chr17 18362564 18362854 -67075626 + AluSx SINE Alu 3 306 -6 426 191 22 0 chr17 18363219 18363355 -67075125 + (TCCA)n Simple_repeat Simple_repeat 1 139 0 229 339 85 25 chr17 18363511 18363629 -67074851 + L2 LINE L2 3143 3267 -5 933 203 286 0 chr17 18366167 18366562 -67071918 + MLT1E1 LTR MaLR 147 654 0 692 237 105 23 chr17 18368035 18368254 -67070226 + L1MB5 LINE L1 5928 6164 -10 184 299 104 0 chr17 18368943 18369020 -67069460 - L2 LINE L2 -787 2527 2443 253 302 38 38 chr17 18369646 18369752 -67068728 + MIR SINE MIR 36 141 -121 2272 63 0 11 chr17 18371075 18371361 -67067119 - AluSx SINE Alu -29 283 1 2269 201 55 72 chr17 18373343 18373978 -67064502 - L1MB7 LINE L1 -95 6089 5465 1191 204 134 19 chr17 18373978 18374247 -67064233 + AluJo SINE Alu 3 302 0 2269 201 55 72 chr17 18374247 18374304 -67064176 - L1MB7 LINE L1 -719 5465 5409 2341 88 3 0 chr17 18374322 18374627 -67063853 + AluSc SINE Alu 1 306 -3 251 314 70 26 chr17 18375172 18375207 -67063273 - MER53 DNA DNA -26 163 131 2101 101 0 4 chr17 18375207 18375485 -67062995 + AluSg SINE Alu 1 277 -33 194 0 39 0 chr17 18375487 18375513 -67062967 + (CAAA)n Simple_repeat Simple_repeat 1 27 0 251 314 70 26 chr17 18375513 18375630 -67062850 - MER53 DNA DNA -58 131 1 186 254 102 0 chr17 18376021 18376080 -67062400 + L2 LINE L2 3127 3191 -81 2366 73 3 0 chr17 18376526 18376829 -67061651 - AluSp SINE Alu -7 306 3 668 276 33 38 chr17 18376934 18377144 -67061336 + MIR SINE MIR 25 233 -29 606 292 51 36 chr17 18379296 18379632 -67058848 + L1MC4a LINE L1 5700 6040 -1768 2137 114 10 0 chr17 18379708 18380014 -67058466 + AluSx SINE Alu 1 309 -3 476 333 123 35 chr17 18380059 18380377 -67058103 + L1MC4a LINE L1 6277 6622 -1186 1350 81 0 0 chr17 18380383 18380556 -67057924 + AluSg/x SINE Alu 129 301 -11 487 228 51 30 chr17 18380579 18380782 -67057698 + L1MC5 LINE L1 6673 6978 -1064 954 239 14 40 chr17 18380948 18381564 -67056916 + L1M4 LINE L1 4651 5333 -830 * 1836 207 49 36 chr17 18381560 18382240 -67056240 + L1ME2 LINE L1 4013 4683 -1481 2133 125 3 0 chr17 18382240 18382545 -67055935 + AluSx SINE Alu 1 306 -6 1836 207 49 36 chr17 18382545 18383223 -67055257 + L1ME2 LINE L1 4683 5351 -813 2147 108 20 3 chr17 18383223 18383520 -67054960 - AluSx SINE Alu -10 302 1 1836 207 49 36 chr17 18383520 18384041 -67054439 + L1ME2 LINE L1 5351 6096 -68 1469 156 53 32 chr17 18384041 18384324 -67054156 + AluJo SINE Alu 1 289 -23 1836 207 49 36 chr17 18384324 18384385 -67054095 + L1ME2 LINE L1 6096 6155 -9 1880 118 44 0 chr17 18384390 18384703 -67053777 - AluSx SINE Alu 0 325 1 524 181 45 196 chr17 18384712 18384780 -67053700 + L1MC5 LINE L1 7640 7717 -244 2201 108 3 0 chr17 18384780 18385077 -67053403 + AluSg SINE Alu 1 298 -12 524 181 45 196 chr17 18385077 18385345 -67053135 + L1MC5 LINE L1 7717 7925 -36 250 331 74 16 chr17 18385354 18385475 -67053005 + MIR SINE MIR 55 182 -80 216 333 287 0 chr17 18385624 18385798 -67052682 - MIR SINE MIR -6 256 33 230 191 16 16 chr17 18386910 18386973 -67051507 + (CAGCC)n Simple_repeat Simple_repeat 1 63 0 1378 162 0 0 chr17 18387850 18388066 -67050414 + AluJo SINE Alu 86 301 -11 820 180 0 0 chr17 18388630 18388769 -67049711 - FLAM_C SINE Alu 0 143 5 473 282 163 28 chr17 18388773 18389092 -67049388 - L1ME2 LINE L1 -56 6108 5747 201 191 0 48 chr17 18390357 18390399 -67048081 + L2 LINE L2 3229 3268 -4 182 318 32 0 chr17 18391158 18391221 -67047259 - MIR SINE MIR -108 154 90 2314 109 0 0 chr17 18391462 18391773 -67046707 - AluSx SINE Alu -1 311 1 246 311 0 75 chr17 18392175 18392281 -67046199 - MIR SINE MIR -47 215 118 308 176 95 14 chr17 18392532 18392606 -67045874 + MER5A DNA MER1_type 14 93 -96 2076 133 0 0 chr17 18393061 18393355 -67045125 - AluSq SINE Alu -19 294 1 298 301 66 7 chr17 18393623 18393759 -67044721 - MIR SINE MIR -62 200 57 208 413 10 20 chr17 18393711 18393762 -67044718 + MIR3 SINE MIR 7 57 -151 * 2220 78 58 0 chr17 18393762 18394056 -67044424 - AluSq SINE Alu -2 311 1 208 413 10 20 chr17 18394056 18394205 -67044275 + MIR3 SINE MIR 57 205 -3 249 346 19 0 chr17 18396971 18397078 -67041402 - L2 LINE L2 -238 3034 2926 372 59 0 0 chr17 18397139 18397190 -67041290 + (TCC)n Simple_repeat Simple_repeat 3 53 0 2275 69 14 0 chr17 18398046 18398337 -67040143 - AluSp SINE Alu -18 295 1 1503 162 33 53 chr17 18398513 18398675 -67039805 - AluJo SINE Alu -16 296 132 186 43 0 0 chr17 18398675 18398698 -67039782 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2155 83 0 0 chr17 18398698 18398964 -67039516 - AluSg SINE Alu -28 282 17 1503 162 33 53 chr17 18398964 18399102 -67039378 - AluJo SINE Alu -178 134 1 439 287 23 0 chr17 18399118 18399247 -67039233 - L1MD3 LINE L1 -11 7984 7853 1896 198 100 0 chr17 18400005 18400445 -67038035 - MER6 DNA MER2_type -350 515 32 233 324 36 9 chr17 18400471 18400582 -67037898 + L1MC/D LINE L1 5654 5767 -2041 1695 91 5 0 chr17 18401413 18401634 -67036846 + AluSx SINE Alu 1 222 -90 1388 82 0 0 chr17 18401634 18401816 -67036664 + AluSg/x SINE Alu 113 294 -18 2259 103 0 6 chr17 18404096 18404408 -67034072 - AluSx SINE Alu -2 310 1 541 316 13 0 chr17 18404544 18404702 -67033778 - MIR SINE MIR -39 223 64 180 276 40 26 chr17 18405469 18405545 -67032935 - L2 LINE L2 -15 3257 3181 2194 112 0 0 chr17 18405871 18406166 -67032314 - AluSx SINE Alu -17 295 1 257 284 0 15 chr17 18407077 18407144 -67031336 + L2 LINE L2 3206 3271 -1 1489 176 39 20 chr17 18407552 18407669 -67030811 + AluJo SINE Alu 1 114 -198 252 59 0 0 chr17 18407669 18407703 -67030777 + (CA)n Simple_repeat Simple_repeat 1 34 0 1489 176 39 20 chr17 18407703 18407717 -67030763 + AluJo SINE Alu 114 126 -186 2264 112 0 3 chr17 18407717 18408029 -67030451 + AluSq SINE Alu 1 311 -2 1489 176 39 20 chr17 18408029 18408202 -67030278 + AluJo SINE Alu 126 312 0 285 269 13 13 chr17 18408580 18408658 -67029822 - MIR SINE MIR -59 149 72 354 241 161 0 chr17 18408809 18408921 -67029559 - MIR SINE MIR -109 153 24 264 331 95 41 chr17 18409235 18409404 -67029076 - MIR3 SINE MIR -13 195 18 222 366 90 0 chr17 18410681 18410815 -67027665 - MIR SINE MIR -6 256 111 220 351 14 0 chr17 18411124 18411198 -67027282 - MIR SINE MIR -124 138 64 2118 129 7 0 chr17 18412021 18412323 -67026157 + AluSx SINE Alu 1 304 -8 245 267 92 23 chr17 18413893 18414024 -67024456 - MIR3 SINE MIR -12 196 57 333 109 0 0 chr17 18417513 18417568 -67020912 + (CA)n Simple_repeat Simple_repeat 2 56 0 310 282 126 0 chr17 18417994 18418097 -67020383 - MIR3 SINE MIR -8 200 85 237 132 0 0 chr17 18418310 18418348 -67020132 + (TCC)n Simple_repeat Simple_repeat 1 38 0 321 204 34 23 chr17 18418552 18418640 -67019840 + MER81 DNA DNA 1 89 -25 190 321 19 0 chr17 18419585 18419638 -67018842 - L2 LINE L2 -11 3261 3208 397 268 63 0 chr17 18419861 18419988 -67018492 + MER20 DNA MER1_type 27 161 -58 268 264 0 0 chr17 18420685 18420738 -67017742 + L2 LINE L2 3219 3271 -1 545 255 240 19 chr17 18421142 18421190 -67017290 + L2 LINE L2 2245 2281 -1032 1667 177 33 3 chr17 18421190 18421490 -67016990 - AluJb SINE Alu -3 309 1 545 255 240 19 chr17 18421490 18422091 -67016389 + L2 LINE L2 2281 3059 -254 230 278 237 0 chr17 18422239 18422336 -67016144 + MIR SINE MIR 106 225 -37 2308 95 0 0 chr17 18422397 18422693 -67015787 + AluSx SINE Alu 1 296 -16 1874 118 61 17 chr17 18422693 18422990 -67015490 + AluSg SINE Alu 1 310 0 999 194 45 0 chr17 18423016 18423217 -67015263 - MER2 DNA MER2_type -135 210 1 1652 141 0 0 chr17 18423272 18423521 -67014959 - AluJb SINE Alu -12 300 52 189 0 0 0 chr17 18423735 18423756 -67014724 + (A)n Simple_repeat Simple_repeat 1 21 0 2379 88 0 3 chr17 18423804 18424111 -67014369 - AluSx SINE Alu -6 306 1 988 228 186 42 chr17 18424500 18424930 -67013550 - MLT1D LTR MaLR -7 498 7 249 265 31 0 chr17 18426854 18426958 -67011522 + L1ME LINE L1 5355 5459 -705 2583 37 0 0 chr17 18427225 18427524 -67010956 + AluY SINE Alu 1 299 -12 736 85 0 0 chr17 18427663 18427757 -67010723 - AluJo/FRAM SINE Alu -16 296 203 1487 115 115 4 chr17 18427757 18427992 -67010488 + AluJo SINE Alu 35 295 -17 33 0 0 0 chr17 18427992 18428025 -67010455 + AT_rich Low_complexity Low_complexity 1 33 0 34 60 0 24 chr17 18428077 18428120 -67010360 + AT_rich Low_complexity Low_complexity 1 43 -39 846 73 0 18 chr17 18428120 18428229 -67010251 + U6 snRNA snRNA 1 107 0 1493 72 16 0 chr17 18428229 18428423 -67010057 + L1PA7 LINE L1 5953 6149 -5 34 60 0 24 chr17 18428423 18428462 -67010018 + AT_rich Low_complexity Low_complexity 41 82 0 2236 97 10 0 chr17 18428885 18429185 -67009295 + AluSx SINE Alu 1 303 -9 198 103 0 0 chr17 18429569 18429598 -67008882 + (GGGGA)n Simple_repeat Simple_repeat 4 32 0 2120 96 3 0 chr17 18429707 18429989 -67008491 + AluSg SINE Alu 21 303 -7 2259 103 0 0 chr17 18432271 18432572 -67005908 + AluSg SINE Alu 1 301 -9 2185 102 3 3 chr17 18432583 18432888 -67005592 + AluSq SINE Alu 1 305 -8 218 293 83 45 chr17 18432982 18433115 -67005365 + MIR SINE MIR 15 152 -110 2450 68 0 7 chr17 18433641 18433950 -67004530 - AluY SINE Alu -4 307 1 816 172 0 21 chr17 18433954 18434099 -67004381 - AluJb SINE Alu -170 142 1 297 369 60 0 chr17 18434302 18434470 -67004010 + MIR SINE MIR 81 258 -4 2324 94 0 0 chr17 18434545 18434854 -67003626 + AluSx SINE Alu 1 309 -3 386 217 22 0 chr17 18434866 18434958 -67003522 + L1M4 LINE L1 2482 2575 -3571 2376 57 3 7 chr17 18435290 18435588 -67002892 + AluY SINE Alu 1 297 -14 1150 56 25 0 chr17 18435628 18435789 -67002691 + (GAAA)n Simple_repeat Simple_repeat 4 168 0 2148 259 139 17 chr17 18435896 18436210 -67002270 + L1M4 LINE L1 2711 2985 -3161 2270 119 0 0 chr17 18436210 18436522 -67001958 + AluSx SINE Alu 1 312 0 2148 259 139 17 chr17 18436522 18437069 -67001411 + L1M4 LINE L1 2985 3733 -2413 1745 123 41 38 chr17 18437069 18437193 -67001287 + AluSx SINE Alu 1 123 -189 216 0 0 0 chr17 18437193 18437217 -67001263 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1745 123 41 38 chr17 18437217 18437385 -67001095 + AluSx SINE Alu 123 294 -18 2148 259 139 17 chr17 18437385 18437601 -67000879 + L1M4 LINE L1 3733 3921 -2225 2236 100 0 3 chr17 18438450 18438751 -66999729 - AluSp SINE Alu -13 300 1 25 0 0 0 chr17 18438761 18438786 -66999694 + AT_rich Low_complexity Low_complexity 1 25 0 322 167 26 135 chr17 18438927 18439083 -66999397 + Charlie5 DNA MER1_type 2484 2622 0 231 278 65 19 chr17 18439614 18439722 -66998758 + L1ME3A LINE L1 6053 6165 -5 345 291 299 11 chr17 18441729 18442103 -66996377 - L2 LINE L2 -1 3312 2831 2293 92 3 0 chr17 18442133 18442427 -66996053 + AluSx SINE Alu 1 295 -17 2045 89 0 0 chr17 18443270 18443517 -66994963 + AluSg SINE Alu 13 259 -51 2366 88 14 0 chr17 18443519 18443814 -66994666 + AluSg SINE Alu 1 299 -11 430 346 80 31 chr17 18443888 18444177 -66994303 - L3 LINE CR1 -37 1540 1238 221 264 149 0 chr17 18444417 18444504 -66993976 + MIR SINE MIR 152 251 -11 1910 147 3 29 chr17 18444507 18444819 -66993661 + AluJo SINE Alu 1 304 -8 435 293 98 53 chr17 18445443 18445765 -66992715 + L2 LINE L2 2883 3222 -91 2336 105 0 3 chr17 18445765 18446069 -66992411 - AluSx SINE Alu -9 303 1 435 293 98 53 chr17 18446069 18446084 -66992396 + L2 LINE L2 3222 3235 -78 524 167 0 0 chr17 18446099 18446183 -66992297 - FRAM/FAM SINE Alu -95 81 1 2246 95 3 20 chr17 18446196 18446491 -66991989 - AluSx SINE Alu -22 290 1 326 250 73 10 chr17 18446492 18446588 -66991892 + L2 LINE L2 3208 3309 -4 303 205 84 12 chr17 18446593 18446676 -66991804 + MIR SINE MIR 64 152 -56 2260 112 3 3 chr17 18446730 18447026 -66991454 + AluSq SINE Alu 1 296 -17 1955 145 3 3 chr17 18447039 18447364 -66991116 + AluJb SINE Alu 1 325 0 509 268 89 16 chr17 18447377 18447567 -66990913 - MIR SINE MIR 0 262 59 373 204 242 6 chr17 18447596 18447753 -66990727 + L2 LINE L2 2782 2975 -339 446 213 55 102 chr17 18447842 18447929 -66990551 + L1MEc LINE L1 1541 1631 -4765 2274 84 24 7 chr17 18447929 18448225 -66990255 + AluSc SINE Alu 1 301 -8 446 213 55 102 chr17 18448225 18448236 -66990244 + L1MEc LINE L1 1631 1641 -4755 2427 108 0 0 chr17 18448236 18448543 -66989937 + AluSx SINE Alu 1 307 -5 446 213 55 102 chr17 18448543 18448697 -66989783 + L1MEc LINE L1 1641 1782 -4614 587 267 128 0 chr17 18448779 18448974 -66989506 + L1MEc LINE L1 2628 2847 -3368 1307 69 52 0 chr17 18448984 18449157 -66989323 - AluSp SINE Alu -18 295 114 622 196 0 23 chr17 18449196 18449329 -66989151 - FLAM_C SINE Alu -3 130 1 232 250 31 10 chr17 18449628 18449724 -66988756 + MLT1K LTR MaLR 142 239 -349 1939 149 14 10 chr17 18449756 18450051 -66988429 + AluJb SINE Alu 1 296 -16 320 207 81 46 chr17 18450051 18450138 -66988342 - L1M4 LINE L1 -3273 2873 2784 2197 100 30 0 chr17 18450138 18450437 -66988043 + AluSx SINE Alu 1 308 -4 2127 76 65 0 chr17 18450444 18450721 -66987759 + AluSp SINE Alu 1 295 -18 2333 87 0 3 chr17 18451138 18451458 -66987022 + AluY SINE Alu 1 311 0 2087 115 0 17 chr17 18451555 18451691 -66986789 + AluSx SINE Alu 2 139 -173 2317 108 0 13 chr17 18451691 18452041 -66986439 + AluSc SINE Alu 1 309 0 2087 115 0 17 chr17 18452041 18452191 -66986289 + AluSx SINE Alu 139 283 -29 1422 228 134 29 chr17 18452204 18452718 -66985762 - L1MC4 LINE L1 0 8042 7475 203 303 15 0 chr17 18453225 18453291 -66985189 + MIR3 SINE MIR 104 170 -38 259 279 29 0 chr17 18453320 18453388 -66985092 - MER20B DNA MER1_type -605 178 109 238 310 142 9 chr17 18453556 18453669 -66984811 - MIR SINE MIR -119 143 16 229 356 134 31 chr17 18453793 18453987 -66984493 + MLT1I LTR MaLR 82 295 -114 243 221 10 125 chr17 18454065 18454169 -66984311 + MLT1H LTR MaLR 456 547 -2 558 303 76 0 chr17 18454176 18454374 -66984106 + MIR SINE MIR 47 259 -3 257 330 6 6 chr17 18454806 18454982 -66983498 + (TG)n Simple_repeat Simple_repeat 2 177 0 664 102 92 0 chr17 18455070 18455168 -66983312 - AluSq/x SINE Alu -204 109 3 2669 144 34 32 chr17 18455170 18455704 -66982776 - L1MB7 LINE L1 -357 5827 5293 229 295 36 36 chr17 18456461 18456573 -66981907 + L2 LINE L2 2715 2826 -488 215 180 90 90 chr17 18456584 18456673 -66981807 - L2 LINE L2 -2 3270 3182 183 345 94 34 chr17 18456750 18456985 -66981495 + L2 LINE L2 2852 3100 -172 2321 125 0 0 chr17 18457025 18457328 -66981152 - AluSx SINE Alu -9 303 1 844 131 25 131 chr17 18457512 18457532 -66980948 + MER20 DNA MER1_type 4 25 -194 2293 93 0 3 chr17 18457532 18457822 -66980658 - AluSg SINE Alu -14 296 8 844 131 25 131 chr17 18457822 18457837 -66980643 + MER20 DNA MER1_type 25 40 -179 297 0 0 0 chr17 18457837 18457870 -66980610 + (CA)n Simple_repeat Simple_repeat 1 33 0 844 131 25 131 chr17 18457870 18457993 -66980487 + MER20 DNA MER1_type 40 133 -86 2549 81 0 0 chr17 18457993 18458301 -66980179 + AluY SINE Alu 1 308 -3 844 131 25 131 chr17 18458301 18458377 -66980103 + MER20 DNA MER1_type 133 215 -4 1027 255 95 26 chr17 18458755 18459135 -66979345 + MLT1J2 LTR MaLR 44 449 -1 619 181 0 9 chr17 18459576 18459692 -66978788 - AluJo/FRAM SINE Alu -15 297 183 1267 164 91 17 chr17 18459695 18459927 -66978553 - AluJo SINE Alu -59 253 5 583 290 79 38 chr17 18460117 18460407 -66978073 - MLT1L LTR MaLR -180 435 134 8582 44 12 0 chr17 18460416 18461373 -66977107 - LTR5 LTR ERVK 0 969 1 395 338 19 7 chr17 18462017 18462171 -66976309 - MIR SINE MIR 0 262 107 550 277 7 14 chr17 18462247 18462395 -66976085 + MIR SINE MIR 105 251 -11 296 211 42 42 chr17 18462395 18462490 -66975990 - MIR SINE MIR -104 158 64 402 82 0 16 chr17 18462491 18462545 -66975935 + Alu SINE Alu 1 55 -248 2239 76 35 10 chr17 18462545 18462834 -66975646 + AluSq SINE Alu 11 306 -7 859 253 37 72 chr17 18463315 18463770 -66974710 + L1MC5 LINE L1 7221 7659 -302 1679 182 34 0 chr17 18463771 18464062 -66974418 - AluJb SINE Alu -11 301 1 935 201 5 27 chr17 18464083 18464267 -66974213 + AluJo SINE Alu 117 296 -16 2321 101 16 3 chr17 18464267 18464575 -66973905 + AluSq SINE Alu 1 312 -1 4862 111 4 21 chr17 18464608 18465044 -66973436 - L1PB3 LINE L1 -38 6116 5674 2150 143 7 0 chr17 18465044 18465352 -66973128 - AluSx SINE Alu -2 310 1 4862 111 4 21 chr17 18465352 18465436 -66973044 - L1PB3 LINE L1 -480 5674 5590 2394 97 0 3 chr17 18465436 18465747 -66972733 - AluSp SINE Alu -3 310 1 4862 111 4 21 chr17 18465747 18465988 -66972492 - L1PB3 LINE L1 -564 5590 5367 4802 120 6 45 chr17 18465996 18466495 -66971985 - L1MC1 LINE L1 -13 6320 5803 2161 71 43 11 chr17 18466495 18466775 -66971705 - AluSx SINE Alu -7 305 17 4802 120 6 45 chr17 18466775 18466796 -66971684 - L1MC1 LINE L1 -530 5803 5783 2233 107 4 0 chr17 18466796 18467101 -66971379 - AluSp SINE Alu 0 306 1 4802 120 6 45 chr17 18467101 18467409 -66971071 - L1MC1 LINE L1 -550 5783 5522 644 113 15 88 chr17 18467409 18467440 -66971040 + L1MCa LINE L1 2223 2255 -4171 727 106 68 68 chr17 18467440 18467572 -66970908 + FLAM_C SINE Alu 1 132 -1 644 113 15 88 chr17 18467572 18467633 -66970847 + L1MCa LINE L1 2255 2319 -4107 2361 101 0 0 chr17 18467633 18467921 -66970559 + AluSg SINE Alu 1 288 -22 644 113 15 88 chr17 18467921 18468031 -66970449 + L1MCa LINE L1 2319 2411 -4015 310 318 61 20 chr17 18468140 18468288 -66970192 - L1ME LINE L1 -373 5748 5595 2430 79 16 7 chr17 18468860 18469164 -66969316 - AluSg SINE Alu -3 307 1 2264 88 0 42 chr17 18469698 18470005 -66968475 - AluSg SINE Alu -16 294 1 2393 89 3 0 chr17 18470757 18471049 -66967431 + AluSp SINE Alu 1 293 -20 547 291 31 20 chr17 18472375 18472571 -66965909 - L2 LINE L2 -11 3302 3105 2135 138 0 13 chr17 18473555 18473867 -66964613 - AluSx SINE Alu -4 308 1 272 282 78 49 chr17 18474135 18474277 -66964203 - L2 LINE L2 -32 3281 3136 803 254 47 13 chr17 18474313 18474549 -66963931 + MLT1J LTR MaLR 1 244 -267 288 149 0 104 chr17 18474556 18474623 -66963857 - Alu SINE Alu -2 300 241 2370 82 10 7 chr17 18474623 18474929 -66963551 - AluSx SINE Alu -5 307 1 413 233 0 0 chr17 18474929 18475002 -66963478 + MLT1J LTR MaLR 237 309 -202 293 300 67 0 chr17 18475086 18475176 -66963304 + MIR SINE MIR 73 168 -94 657 227 80 12 chr17 18475189 18475352 -66963128 - MER5A DNA MER1_type -2 187 14 387 172 115 159 chr17 18476245 18476402 -66962078 + MIR SINE MIR 12 161 -101 366 188 47 12 chr17 18476408 18476493 -66961987 - LTR67 LTR ERVL -1 556 469 1441 237 139 16 chr17 18476503 18476941 -66961539 + L1ME3A LINE L1 5676 6167 -3 2447 92 0 0 chr17 18477040 18477343 -66961137 - AluSq SINE Alu -10 303 1 422 261 35 0 chr17 18477394 18477509 -66960971 + MIR SINE MIR 27 145 -117 445 228 26 26 chr17 18477734 18477848 -66960632 - MER5B DNA MER1_type -64 114 1 194 103 0 26 chr17 18478037 18478076 -66960404 + (TTTTA)n Simple_repeat Simple_repeat 3 40 0 1271 222 125 23 chr17 18478478 18478892 -66959588 - MLT1C LTR MaLR -4 622 6 419 222 19 28 chr17 18479048 18479156 -66959324 - MER5A DNA MER1_type -80 109 3 193 248 339 8 chr17 18480580 18480701 -66957779 + L3 LINE CR1 1314 1474 -103 2170 93 43 0 chr17 18481615 18481894 -66956586 - AluSx SINE Alu -21 291 1 2621 183 58 6 chr17 18482088 18482601 -66955879 - MLT1F LTR MaLR 0 542 3 230 331 33 58 chr17 18482872 18482993 -66955487 + MLT1K LTR MaLR 103 220 -368 338 211 110 158 chr17 18483039 18483248 -66955232 + MLT1K LTR MaLR 383 581 -7 1247 59 0 30 chr17 18483278 18483481 -66954999 + SVA Other Other 670 866 -520 6453 56 52 47 chr17 18483628 18484636 -66953844 + SVA Other Other 433 1444 0 544 280 63 11 chr17 18485022 18485197 -66953283 - MIR SINE MIR -2 260 77 24 0 0 0 chr17 18486232 18486256 -66952224 + AT_rich Low_complexity Low_complexity 1 24 0 2166 128 11 14 chr17 18486258 18486626 -66951854 - L1MB3 LINE L1 -3 6180 5814 250 152 0 0 chr17 18486639 18486685 -66951795 - L1MB3 LINE L1 -348 5832 5787 670 87 11 0 chr17 18486685 18486777 -66951703 - MER4A LTR ERV1 0 664 572 * 1762 127 74 63 chr17 18486772 18487069 -66951411 - MER4B LTR ERV1 -224 386 83 2484 91 0 0 chr17 18487069 18487376 -66951104 - AluSx SINE Alu -5 307 1 1762 127 74 63 chr17 18487376 18487457 -66951023 - MER4B LTR ERV1 -527 83 4 976 161 55 46 chr17 18487458 18487641 -66950839 - L1MB3 LINE L1 -390 5793 5606 2381 81 7 0 chr17 18487641 18487939 -66950541 - AluSp SINE Alu -13 300 1 976 161 55 46 chr17 18487939 18487972 -66950508 - L1MB3 LINE L1 -577 5606 5575 2231 134 37 17 chr17 18487985 18488395 -66950085 - L1MA4 LINE L1 -6 6294 5877 1399 143 151 12 chr17 18488642 18488901 -66949579 + AluSq SINE Alu 1 295 -8 1169 107 47 18 chr17 18489584 18489753 -66948727 + AluSq SINE Alu 1 174 -139 2053 128 7 7 chr17 18489854 18490152 -66948328 - AluSx SINE Alu -9 303 6 528 336 27 16 chr17 18491477 18491733 -66946747 + MLT1L LTR MaLR 352 610 -5 231 61 0 0 chr17 18491893 18491926 -66946554 + (ATG)n Simple_repeat Simple_repeat 2 34 0 493 265 103 40 chr17 18491928 18492131 -66946349 - MIR SINE MIR -9 253 33 1769 134 22 73 chr17 18492131 18492445 -66946035 - AluJo SINE Alu -14 298 1 493 265 103 40 chr17 18492445 18492464 -66946016 - MIR SINE MIR -229 33 17 434 319 7 0 chr17 18492608 18492752 -66945728 + L1MC4a LINE L1 5674 5818 -1990 1889 110 82 25 chr17 18492755 18493110 -66945370 - THE1C LTR MaLR 0 375 1 250 335 60 33 chr17 18493172 18493354 -66945126 + L1MC4a LINE L1 5822 6008 -1800 1046 261 29 54 chr17 18493644 18494122 -66944358 - L1MC5 LINE L1 -25 7936 7471 5944 36 0 0 chr17 18494690 18495413 -66943067 - L1PA5 LINE L1 -6 6148 5426 2043 60 0 0 chr17 18495413 18495678 -66942802 + L1P LINE L1 4714 4978 -1168 584 217 0 0 chr17 18495821 18495927 -66942553 - MER52A LTR ERV1 0 1755 1650 4957 168 70 61 chr17 18495958 18498063 -66940417 - MER52A-int LTR ERV1 -1679 5739 2085 2079 87 0 8 chr17 18498063 18498329 -66940151 - AluSc SINE Alu -8 301 38 4957 168 70 61 chr17 18498329 18498440 -66940040 - MER52A-int LTR ERV1 -5333 2085 1977 7391 116 13 1 chr17 18498522 18499580 -66938900 - MER52A-int LTR ERV1 -4260 2831 1761 3346 123 21 26 chr17 18499723 18499804 -66938676 - MER52A-int LTR ERV1 -6520 571 491 2118 113 24 7 chr17 18499804 18500096 -66938384 - AluSx SINE Alu -14 298 2 3346 123 21 26 chr17 18500096 18500543 -66937937 - MER52A-int LTR ERV1 -6600 491 46 279 65 0 0 chr17 18500543 18500589 -66937891 + L1PA3 LINE L1 6110 6155 0 323 213 16 0 chr17 18500590 18500651 -66937829 - MER52A-int LTR ERV1 -7029 62 1 8065 186 111 12 chr17 18500651 18502246 -66936234 - MER52A LTR ERV1 0 1755 3 313 328 70 5 chr17 18504207 18504393 -66934087 + L1ME LINE L1 5550 5747 -423 918 194 6 6 chr17 18504802 18504962 -66933518 + AluJb SINE Alu 137 296 -16 204 318 0 0 chr17 18505400 18505463 -66933017 + L2 LINE L2 2979 3041 -231 1229 249 158 10 chr17 18505651 18506350 -66932130 + L2 LINE L2 2494 3292 -21 1819 132 79 7 chr17 18506530 18506810 -66931670 - MER1B DNA MER1_type 0 339 40 1939 141 20 27 chr17 18506904 18507202 -66931278 - AluSx SINE Alu -16 296 1 773 167 57 97 chr17 18507371 18507599 -66930881 - MLT1H LTR MaLR -266 283 65 3330 150 92 34 chr17 18507602 18508275 -66930205 - LTR62 LTR ERVK -5 714 3 328 248 203 21 chr17 18508428 18508708 -66929772 + MLT1H1 LTR MaLR 201 554 -1 1332 219 105 26 chr17 18509748 18510213 -66928267 + MLT1J LTR MaLR 2 503 -8 1644 127 11 93 chr17 18510276 18510339 -66928141 - L1MB7 LINE L1 -8 6176 6109 1782 202 3 3 chr17 18510339 18510651 -66927829 + AluJo SINE Alu 1 312 0 1644 127 11 93 chr17 18510651 18510964 -66927516 - L1MB7 LINE L1 -75 6109 5831 701 300 115 22 chr17 18512401 18512801 -66925679 + L1ME3A LINE L1 5398 5834 -336 431 291 127 32 chr17 18512811 18513000 -66925480 - MLT1K LTR MaLR -327 261 55 407 247 78 19 chr17 18513203 18513357 -66925123 + LTR16A1 LTR ERVL 217 379 -78 209 209 0 0 chr17 18513509 18513552 -66924928 + MIR SINE MIR 91 133 -75 1217 279 54 56 chr17 18513558 18513666 -66924814 + L1ME4a LINE L1 5326 5433 -688 1896 166 3 25 chr17 18513666 18513985 -66924495 + AluJb SINE Alu 1 312 0 1217 279 54 56 chr17 18513985 18514590 -66923890 + L1ME4a LINE L1 5433 6039 -82 2169 122 0 25 chr17 18514590 18514910 -66923570 - AluSx SINE Alu 0 312 1 1217 279 54 56 chr17 18514910 18514977 -66923503 + L1ME4a LINE L1 6039 6105 -16 419 291 148 15 chr17 18515013 18515216 -66923264 - MIR SINE MIR -17 245 16 348 24 0 0 chr17 18515739 18515780 -66922700 + (CA)n Simple_repeat Simple_repeat 1 41 0 270 174 248 28 chr17 18515780 18515889 -66922591 + L2 LINE L2 3159 3291 -22 188 67 33 0 chr17 18515895 18515925 -66922555 + (TGAA)n Simple_repeat Simple_repeat 2 32 0 2264 62 4 7 chr17 18516541 18516814 -66921666 + AluSc SINE Alu 21 292 -17 3219 219 29 7 chr17 18516844 18517614 -66920866 + L1MC4a LINE L1 6736 7522 -286 561 208 0 0 chr17 18517660 18517756 -66920724 + MER58A DNA MER1_type 1 96 -11 337 145 26 13 chr17 18517756 18517832 -66920648 + CT-rich Low_complexity Low_complexity 3 79 0 1267 178 0 54 chr17 18517834 18518076 -66920404 - AluJb SINE Alu 0 312 84 983 159 15 0 chr17 18518161 18518362 -66920118 + L1MD3 LINE L1 7779 7982 -13 429 197 39 28 chr17 18518674 18518852 -66919628 + (TCTCTG)n Simple_repeat Simple_repeat 1 180 0 208 357 0 13 chr17 18518858 18519012 -66919468 + CT-rich Low_complexity Low_complexity 2 153 0 195 234 78 0 chr17 18519059 18519123 -66919357 - MIR3 SINE MIR -25 183 115 277 298 99 14 chr17 18520610 18520751 -66917729 - MIR SINE MIR -14 248 96 1985 146 72 57 chr17 18520801 18521220 -66917260 - MSTC LTR MaLR -3 425 1 382 301 43 41 chr17 18521316 18521498 -66916982 + MIR SINE MIR 33 219 -43 1594 195 0 30 chr17 18522949 18523252 -66915228 - AluJb SINE Alu -3 309 16 1608 205 79 0 chr17 18523254 18523620 -66914860 - L1MB5 LINE L1 0 6174 5780 324 325 33 0 chr17 18523669 18523789 -66914691 - MIR SINE MIR -75 187 64 942 187 18 37 chr17 18523790 18523914 -66914566 - L1MB5 LINE L1 -389 5789 5670 2649 47 0 0 chr17 18523914 18524211 -66914269 - AluY SINE Alu -14 297 1 942 187 18 37 chr17 18524211 18524329 -66914151 - L1MB5 LINE L1 -508 5670 5551 521 272 60 5 chr17 18524655 18524839 -66913641 + MER91A DNA MER1_type 1 194 -2 1882 169 240 0 chr17 18525574 18526024 -66912456 - LTR64 LTR ERVK 0 558 1 385 243 188 28 chr17 18526251 18526624 -66911856 - L2 LINE L2 -250 3063 2628 218 294 76 17 chr17 18526774 18526893 -66911587 + MIR SINE MIR 16 141 -67 215 348 11 0 chr17 18527084 18527176 -66911304 - L3b LINE CR1 -359 1224 1132 237 309 12 0 chr17 18528182 18528263 -66910217 - L2 LINE L2 -334 2979 2898 2341 103 0 0 chr17 18528360 18528650 -66909830 + AluSc SINE Alu 1 290 -19 366 315 9 0 chr17 18529158 18529269 -66909211 - LTR16C LTR ERVL 0 491 380 1192 264 131 14 chr17 18529278 18529739 -66908741 - MLT1F LTR MaLR -8 534 1 683 275 93 59 chr17 18530159 18530262 -66908218 + MLT1E LTR MaLR 40 138 -488 1579 178 13 32 chr17 18530262 18530576 -66907904 - AluJo SINE Alu -4 308 1 683 275 93 59 chr17 18530576 18530836 -66907644 + MLT1E LTR MaLR 138 463 -163 467 250 98 12 chr17 18530907 18531071 -66907409 + L1MC5 LINE L1 7773 7950 -11 560 282 127 27 chr17 18531162 18531681 -66906799 - L2 LINE L2 0 3313 2746 324 249 104 6 chr17 18531681 18531853 -66906627 + MIR SINE MIR 3 196 -63 2075 122 31 0 chr17 18532421 18532715 -66905765 - AluSc SINE Alu -6 303 1 25 0 0 0 chr17 18532731 18532756 -66905724 + AT_rich Low_complexity Low_complexity 1 25 0 547 263 139 12 chr17 18532767 18533018 -66905462 - LTR16C LTR ERVL 0 491 209 1856 100 66 8 chr17 18533138 18533397 -66905083 + AluSx SINE Alu 14 287 -25 1312 216 22 11 chr17 18533416 18533685 -66904795 - AluJo SINE Alu -36 276 5 3190 157 68 9 chr17 18533714 18534602 -66903878 - LTR12 LTR ERV1 0 714 2 1360 279 46 22 chr17 18534602 18535103 -66903377 + MER97a DNA MER1_type? 93 605 -289 2277 95 10 0 chr17 18535219 18535513 -66902967 + AluSp SINE Alu 1 297 -16 509 238 16 57 chr17 18535936 18535994 -66902486 + MER97b DNA MER1_type? 869 928 -125 2302 113 0 0 chr17 18535994 18536296 -66902184 - AluSq SINE Alu -11 302 1 509 238 16 57 chr17 18536296 18536430 -66902050 + MER97b DNA MER1_type? 928 1053 0 201 121 0 0 chr17 18536588 18536621 -66901859 + (CA)n Simple_repeat Simple_repeat 2 34 0 28 0 0 0 chr17 18536629 18536657 -66901823 + AT_rich Low_complexity Low_complexity 1 28 0 331 202 0 0 chr17 18536657 18536741 -66901739 - MER53 DNA DNA -30 159 76 410 293 0 0 chr17 18536741 18536857 -66901623 + AluJo SINE Alu 120 235 -77 363 141 0 0 chr17 18536913 18536977 -66901503 - AluJ/FRAM SINE Alu -15 287 224 548 269 62 39 chr17 18537279 18537487 -66900993 - MIR SINE MIR -19 243 31 240 326 10 41 chr17 18538452 18538550 -66899930 - MIR3 SINE MIR -53 155 61 758 275 155 3 chr17 18539144 18539688 -66898792 - L1MC4 LINE L1 -673 7369 6513 208 0 62 0 chr17 18540091 18540123 -66898357 + (TC)n Simple_repeat Simple_repeat 1 34 0 185 262 131 0 chr17 18540315 18540399 -66898081 + MIR3 SINE MIR 61 155 -53 530 199 16 9 chr17 18540683 18540860 -66897620 + L1MB3 LINE L1 5882 6183 0 467 194 276 0 chr17 18541401 18541535 -66896945 + MER45A DNA AcHobo 7 177 -1 252 0 0 0 chr17 18542915 18542943 -66895537 + (A)n Simple_repeat Simple_repeat 1 28 0 1156 199 87 70 chr17 18542945 18543274 -66895206 + L1MB5 LINE L1 5596 5933 -241 2192 108 0 10 chr17 18543274 18543580 -66894900 + AluSx SINE Alu 1 303 -9 1156 199 87 70 chr17 18543580 18543606 -66894874 + L1MB5 LINE L1 5933 5957 -217 534 284 87 22 chr17 18543615 18543798 -66894682 + MIR SINE MIR 60 254 -8 504 281 28 1 chr17 18543960 18544117 -66894363 - MIR SINE MIR -63 145 24 187 211 14 14 chr17 18544214 18544285 -66894195 + CT-rich Low_complexity Low_complexity 2 72 0 1695 248 44 39 chr17 18544306 18544846 -66893634 + L1ME2 LINE L1 5622 6164 0 293 263 0 53 chr17 18545429 18545524 -66892956 - MIR3 SINE MIR -5 203 114 199 282 223 19 chr17 18545628 18545731 -66892749 - MIR SINE MIR -95 167 44 244 315 81 9 chr17 18546188 18546299 -66892181 - MIR SINE MIR -116 146 28 2087 181 28 5 chr17 18546478 18546903 -66891577 + L1MB7 LINE L1 5686 6120 -64 2005 117 0 27 chr17 18546906 18547236 -66891244 - AluSx SINE Alu 0 329 8 455 226 151 13 chr17 18547357 18547449 -66891031 + MER5A DNA MER1_type 9 87 -102 2072 100 24 0 chr17 18547449 18547740 -66890740 - AluY SINE Alu -13 298 1 455 226 151 13 chr17 18547740 18547806 -66890674 + MER5A DNA MER1_type 87 189 0 439 221 181 0 chr17 18547856 18547983 -66890497 - MER5A DNA MER1_type -39 150 1 463 293 42 0 chr17 18548111 18548278 -66890202 + MER5B DNA MER1_type 1 174 -4 441 276 191 0 chr17 18549204 18549356 -66889124 - MER91A DNA MER1_type -7 189 9 7568 114 66 21 chr17 18549740 18550342 -66888138 - Tigger1 DNA MER2_type 0 2418 1844 1665 164 14 7 chr17 18550342 18550634 -66887846 + AluJb SINE Alu 1 294 -18 7568 114 66 21 chr17 18550634 18551308 -66887172 - Tigger1 DNA MER2_type -574 1844 1085 1460 220 35 9 chr17 18551410 18551756 -66886724 - Tigger6 DNA MER2_type -1233 364 10 185 91 0 30 chr17 18553309 18553342 -66885138 + (CA)n Simple_repeat Simple_repeat 2 33 0 219 69 0 0 chr17 18553370 18553399 -66885081 + (TCCA)n Simple_repeat Simple_repeat 4 32 0 1225 204 62 16 chr17 18553869 18554177 -66884303 - MER33 DNA MER1_type -2 322 1 628 309 62 21 chr17 18554177 18554420 -66884060 + L3 LINE CR1 1306 1558 -19 282 242 42 21 chr17 18555504 18555599 -66882881 + MER103 DNA DNA 59 155 -11 317 291 29 22 chr17 18555734 18555886 -66882594 + MER5B DNA MER1_type 23 186 -3 180 152 0 0 chr17 18556552 18556585 -66881895 + T-rich Low_complexity Low_complexity 1 33 0 825 232 145 56 chr17 18556808 18557201 -66881279 - MLT1C LTR MaLR -34 433 6 191 333 48 24 chr17 18557438 18557522 -66880958 + MIR SINE MIR 107 192 -70 6000 111 22 65 chr17 18557774 18558363 -66880117 - Tigger1 DNA MER2_type -1381 1037 424 862 170 85 0 chr17 18558363 18558516 -66879964 + FAM SINE Alu 3 168 -7 6000 111 22 65 chr17 18558516 18558930 -66879550 - Tigger1 DNA MER2_type -1994 424 80 2289 100 0 0 chr17 18558930 18559240 -66879240 - AluSx SINE Alu -2 310 1 6000 111 22 65 chr17 18559240 18559303 -66879177 - Tigger1 DNA MER2_type -2338 80 16 2634 106 118 137 chr17 18559571 18560080 -66878400 - MER4A LTR ERV1 0 664 147 1191 55 0 0 chr17 18560080 18560226 -66878254 - L1PA11 LINE L1 -1 6173 6028 2634 106 118 137 chr17 18560226 18560244 -66878236 - MER4A LTR ERV1 -517 147 130 2295 74 7 3 chr17 18560244 18560542 -66877938 + AluSc SINE Alu 1 299 -10 2634 106 118 137 chr17 18560542 18560690 -66877790 - MER4A LTR ERV1 -534 130 1 323 262 0 36 chr17 18560692 18560776 -66877704 - MIR SINE MIR -117 145 65 213 280 88 48 chr17 18560858 18560983 -66877497 - L2 LINE L2 -221 3051 2922 948 98 0 0 chr17 18561037 18561169 -66877311 - MER41B LTR ERV1 -398 237 106 853 55 0 0 chr17 18561284 18561393 -66877087 - MER41A LTR ERV1 -445 109 1 260 224 177 20 chr17 18561556 18561703 -66876777 - LTR67 LTR ERVL -1 556 387 2075 100 24 7 chr17 18562268 18562557 -66875923 + AluSx SINE Alu 1 294 -18 210 37 0 0 chr17 18562851 18562878 -66875602 + (GA)n Simple_repeat Simple_repeat 2 28 0 1618 161 0 15 chr17 18562878 18563145 -66875335 - AluJo SINE Alu -34 278 16 1971 212 11 43 chr17 18563148 18563704 -66874776 - L1 LINE L1 -2579 3567 3032 2380 50 0 10 chr17 18563704 18564003 -66874477 - AluY SINE Alu -15 296 1 1971 212 11 43 chr17 18564003 18564077 -66874403 - L1 LINE L1 -3114 3032 2957 1911 123 25 44 chr17 18564077 18564119 -66874361 - AluSx SINE Alu -1 311 270 405 0 0 0 chr17 18564119 18564164 -66874316 + (TTTTA)n Simple_repeat Simple_repeat 2 46 0 1911 123 25 44 chr17 18564164 18564438 -66874042 - AluSx SINE Alu -42 270 1 1199 282 24 16 chr17 18565741 18566113 -66872367 + LTR16C LTR ERVL 98 472 -19 466 150 0 0 chr17 18566225 18566305 -66872175 - MLT1I LTR MaLR 0 409 330 240 218 0 18 chr17 18566440 18566495 -66871985 - MLT1I LTR MaLR -241 168 115 283 214 97 19 chr17 18566591 18566694 -66871786 - MLT1G LTR MaLR -5 550 440 339 242 212 32 chr17 18566730 18566920 -66871560 - MLT1G LTR MaLR -265 330 104 2277 66 14 0 chr17 18567334 18567643 -66870837 + AluSp SINE Alu 1 313 0 353 293 30 0 chr17 18567917 18568050 -66870430 - MIR3 SINE MIR -47 161 25 341 218 204 0 chr17 18569385 18569527 -66868953 - L2 LINE L2 -519 2795 2625 1655 87 22 4 chr17 18569548 18569800 -66868680 + AluSx SINE Alu 51 306 0 752 294 107 9 chr17 18569802 18570139 -66868341 + L1MB2 LINE L1 5802 6171 0 367 244 274 30 chr17 18570769 18570970 -66867510 + MIR SINE MIR 5 254 -8 199 177 21 50 chr17 18571050 18571191 -66867289 + (CCCTG)n Simple_repeat Simple_repeat 4 140 0 279 0 0 0 chr17 18571447 18571478 -66867002 + (TCTA)n Simple_repeat Simple_repeat 2 32 0 2270 101 0 9 chr17 18571560 18571876 -66866604 + AluSq SINE Alu 1 313 0 520 317 85 31 chr17 18571903 18572162 -66866318 + L1MEc LINE L1 2061 2333 -4063 478 302 38 36 chr17 18572193 18572637 -66865843 - L1MEd LINE L1 -3572 2643 2199 390 354 50 61 chr17 18572638 18572980 -66865500 - L1MEd LINE L1 -4159 2237 1900 1820 165 0 0 chr17 18573058 18573349 -66865131 - AluJo SINE Alu -21 291 1 375 297 187 30 chr17 18573435 18573970 -66864510 - L1MEd LINE L1 -928 1648 980 279 0 0 0 chr17 18574307 18574338 -66864142 + (TG)n Simple_repeat Simple_repeat 1 31 0 2095 81 7 7 chr17 18574768 18575077 -66863403 + AluY SINE Alu 1 309 0 2168 101 0 7 chr17 18575086 18575384 -66863096 + AluSx SINE Alu 1 296 -16 203 259 250 17 chr17 18577792 18577908 -66860572 - MIR3 SINE MIR -61 147 5 * 213 333 31 0 chr17 18577891 18577987 -66860493 + MIR SINE MIR 31 129 -133 2165 102 3 0 chr17 18582303 18582597 -66855883 - AluSx SINE Alu -17 295 1 22 35 0 0 chr17 18582961 18582990 -66855490 + AT_rich Low_complexity Low_complexity 1 29 0 235 284 78 28 chr17 18586704 18586845 -66851635 + MLT1K LTR MaLR 378 525 -63 1544 176 3 51 chr17 18586861 18587173 -66851307 - AluJb SINE Alu -13 299 3 814 99 91 0 chr17 18587174 18587295 -66851185 - AluJo SINE Alu -176 136 5 273 298 105 0 chr17 18587475 18587599 -66850881 - MIR3 SINE MIR -39 169 33 226 241 139 13 chr17 18588285 18588364 -66850116 - L2 LINE L2 -46 3226 3138 197 365 35 0 chr17 18589289 18589404 -66849076 + L2 LINE L2 2856 2974 -340 201 147 0 0 chr17 18589419 18589453 -66849027 + (CA)n Simple_repeat Simple_repeat 1 34 0 382 346 48 10 chr17 18589918 18590126 -66848354 - L2 LINE L2 -266 3047 2832 232 211 42 28 chr17 18590116 18590187 -66848293 - MER5C DNA MER1_type -25 299 228 * 244 251 17 0 chr17 18590362 18590429 -66848051 - MIR SINE MIR -70 138 64 668 184 57 13 chr17 18590430 18590588 -66847892 - L1M4 LINE L1 -830 5316 5152 2318 97 7 7 chr17 18590640 18590940 -66847540 - AluSg SINE Alu -10 300 1 256 282 27 94 chr17 18591073 18591222 -66847258 + MIR SINE MIR 110 248 -14 271 265 271 18 chr17 18591254 18591424 -66847056 + MIR SINE MIR 49 261 -1 11154 158 47 41 chr17 18591449 18591865 -66846615 + L1MA3 LINE L1 2771 3183 -2963 2339 104 3 0 chr17 18591865 18592174 -66846306 + AluSg SINE Alu 1 310 0 11154 158 47 41 chr17 18592174 18593662 -66844818 + L1MA3 LINE L1 3183 4661 -1485 2567 63 0 3 chr17 18593662 18593962 -66844518 + AluY SINE Alu 1 299 -12 11154 158 47 41 chr17 18593962 18594196 -66844284 + L1MA3 LINE L1 4661 4892 -1254 2329 101 0 0 chr17 18594196 18594493 -66843987 + AluSx SINE Alu 1 297 -15 11154 158 47 41 chr17 18594493 18594995 -66843485 + L1MA3 LINE L1 4892 5364 -782 1780 165 53 3 chr17 18594999 18595284 -66843196 + AluJb SINE Alu 1 299 -13 985 176 0 0 chr17 18595287 18595446 -66843034 + AluJo/FRAM SINE Alu 141 299 -13 4883 108 76 43 chr17 18595446 18595869 -66842611 + L1MA3 LINE L1 5359 5766 -539 2091 105 7 0 chr17 18595869 18596146 -66842334 + AluSg SINE Alu 30 308 -2 4883 108 76 43 chr17 18596146 18596387 -66842093 + L1MA3 LINE L1 5766 5997 -308 2620 66 0 0 chr17 18596387 18596691 -66841789 + AluY SINE Alu 1 304 -7 4883 108 76 43 chr17 18596691 18596757 -66841723 + L1MA3 LINE L1 5997 6059 -246 2310 103 3 0 chr17 18596757 18597049 -66841431 + AluSx SINE Alu 1 293 -19 4883 108 76 43 chr17 18597049 18597232 -66841248 + L1MA3 LINE L1 6059 6305 0 1348 91 0 0 chr17 18597259 18597424 -66841056 + AluY SINE Alu 128 292 -19 31 0 0 0 chr17 18597535 18597566 -66840914 + AT_rich Low_complexity Low_complexity 1 31 0 997 218 97 21 chr17 18597580 18597915 -66840565 + L1MC1 LINE L1 4397 4705 -1575 2434 75 10 0 chr17 18597915 18598210 -66840270 + AluSc SINE Alu 1 298 -11 997 218 97 21 chr17 18598210 18598422 -66840058 + L1MC1 LINE L1 4705 4899 -1381 2048 113 7 27 chr17 18598422 18598558 -66839922 + AluSq SINE Alu 1 138 -175 2566 76 0 0 chr17 18598558 18598862 -66839618 + AluY SINE Alu 3 306 -5 2048 113 7 27 chr17 18598862 18599025 -66839455 + AluSq SINE Alu 138 294 -19 997 218 97 21 chr17 18599025 18599097 -66839383 + L1MC1 LINE L1 4899 4964 -1316 1707 182 7 24 chr17 18599097 18599393 -66839087 + AluJo SINE Alu 20 310 -2 997 218 97 21 chr17 18599393 18599715 -66838765 + L1MC1 LINE L1 4964 5537 -743 763 123 25 8 chr17 18599721 18599843 -66838637 - L1MC1 LINE L1 0 6333 6210 437 264 18 0 chr17 18599843 18599953 -66838527 + L1MC1 LINE L1 6099 6210 -123 2413 104 0 0 chr17 18600609 18600918 -66837562 + AluY SINE Alu 1 309 -2 554 157 11 0 chr17 18600997 18601086 -66837394 + FRAM SINE Alu 68 157 -19 848 167 0 6 chr17 18601220 18601376 -66837104 - L1MB7 LINE L1 -16 6168 6014 2212 116 6 6 chr17 18601647 18601958 -66836522 + AluY SINE Alu 1 311 0 2266 112 7 0 chr17 18602013 18602309 -66836171 + AluSq SINE Alu 1 298 -15 2520 69 7 0 chr17 18602367 18602670 -66835810 - AluY SINE Alu -6 305 1 1842 164 14 0 chr17 18602680 18602995 -66835485 - AluJb SINE Alu 0 319 1 519 244 72 69 chr17 18603262 18603411 -66835069 + MIR SINE MIR 7 157 -105 2444 72 0 3 chr17 18603411 18603717 -66834763 + AluY SINE Alu 1 305 -6 519 244 72 69 chr17 18603717 18603777 -66834703 + MIR SINE MIR 157 215 -47 2026 142 10 20 chr17 18604736 18604874 -66833606 + AluSx SINE Alu 1 139 -173 2300 117 3 0 chr17 18604874 18605181 -66833299 + AluSg SINE Alu 1 308 -2 2026 142 10 20 chr17 18605181 18605344 -66833136 + AluSx SINE Alu 139 299 -13 278 224 100 116 chr17 18605344 18605477 -66833003 + L1ME4a LINE L1 5820 5949 -172 2066 113 7 14 chr17 18605477 18605759 -66832721 + AluSg SINE Alu 1 280 -30 278 224 100 116 chr17 18605759 18605866 -66832614 + L1ME4a LINE L1 5949 6056 -65 226 222 19 0 chr17 18605902 18605956 -66832524 + MLT1K LTR MaLR 41 95 -493 231 314 24 8 chr17 18606143 18606267 -66832213 + LTR67 LTR ERVL 425 550 -7 344 313 116 31 chr17 18606334 18606558 -66831922 + MIR SINE MIR 8 250 -12 214 347 170 22 chr17 18606607 18606918 -66831562 - L2 LINE L2 0 3313 2957 188 326 204 50 chr17 18606975 18607294 -66831186 - L2 LINE L2 -510 2804 2437 730 218 77 0 chr17 18607548 18607718 -66830762 - MER5A DNA MER1_type -6 183 1 931 154 0 41 chr17 18607845 18608014 -66830466 + FAM SINE Alu 1 162 -13 2172 117 0 28 chr17 18608170 18608487 -66829993 - AluSx SINE Alu -4 308 1 2020 109 17 24 chr17 18608514 18608807 -66829673 + AluSq SINE Alu 1 291 -22 403 162 5 189 chr17 18612434 18612471 -66826009 - L1MA10 LINE L1 0 6334 6298 588 267 10 106 chr17 18612471 18612547 -66825933 - L1ME1 LINE L1 -16 6150 6068 2253 109 6 10 chr17 18612547 18612859 -66825621 + AluSx SINE Alu 1 311 -1 588 267 10 106 chr17 18612859 18613167 -66825313 - L1ME1 LINE L1 -98 6068 5802 2590 190 134 50 chr17 18613217 18613459 -66825021 - L1MB7 LINE L1 -9 6175 5955 2157 116 10 10 chr17 18613459 18613760 -66824720 - AluSq SINE Alu -12 301 1 2590 190 134 50 chr17 18613760 18613879 -66824601 - L1MB7 LINE L1 -229 5955 5847 2425 92 3 0 chr17 18613879 18614183 -66824297 - AluSp SINE Alu -6 307 3 2118 110 7 16 chr17 18614185 18614493 -66823987 - AluSq SINE Alu -7 306 2 2590 190 134 50 chr17 18614493 18614705 -66823775 - L1MB7 LINE L1 -337 5847 5654 2251 106 10 3 chr17 18614705 18615006 -66823474 - AluSx SINE Alu -9 303 1 2590 190 134 50 chr17 18615006 18615090 -66823390 - L1MB7 LINE L1 -530 5654 5578 423 205 116 18 chr17 18615090 18615202 -66823278 - FLAM_A SINE Alu -10 123 1 2590 190 134 50 chr17 18615202 18615331 -66823149 - L1MB7 LINE L1 -606 5578 5315 2529 77 0 0 chr17 18615340 18615651 -66822829 + AluY SINE Alu 1 311 0 2190 93 4 0 chr17 18615675 18616003 -66822477 + AluY SINE Alu 1 329 0 2227 106 0 0 chr17 18616013 18616319 -66822161 + AluSq SINE Alu 1 306 0 1750 165 0 26 chr17 18616331 18616634 -66821846 + AluSg SINE Alu 1 295 -15 2311 90 16 13 chr17 18616634 18616944 -66821536 + AluY SINE Alu 1 311 0 576 295 39 73 chr17 18616992 18617433 -66821047 + L2 LINE L2 2842 3267 -5 24 0 0 0 chr17 18617539 18617563 -66820917 + AT_rich Low_complexity Low_complexity 1 24 0 804 303 125 16 chr17 18617594 18618170 -66820310 - L2 LINE L2 -2 3311 2669 2367 84 0 3 chr17 18618354 18618651 -66819829 + AluSx SINE Alu 1 296 -16 187 306 42 49 chr17 18618811 18618955 -66819525 + L2 LINE L2 2925 3067 -205 198 371 90 22 chr17 18619008 18619097 -66819383 + L2 LINE L2 3201 3295 -18 2280 82 9 32 chr17 18619384 18619699 -66818781 - AluSp SINE Alu -5 308 1 1791 143 3 48 chr17 18619708 18620002 -66818478 - AluJo SINE Alu -21 291 11 2492 79 0 7 chr17 18620026 18620329 -66818151 - AluSp SINE Alu -12 301 1 259 275 33 17 chr17 18620334 18620454 -66818026 - MER103 DNA DNA -13 153 32 279 208 0 19 chr17 18620522 18620575 -66817905 - L2 LINE L2 -11 3261 3210 281 291 142 31 chr17 18620581 18620708 -66817772 - MIR SINE MIR -113 149 9 1139 182 4 54 chr17 18621122 18621337 -66817143 + L1MB7 LINE L1 4822 5023 -1123 2502 54 0 10 chr17 18621337 18621634 -66816846 - AluY SINE Alu -17 294 1 1139 182 4 54 chr17 18621634 18621676 -66816804 + L1MB7 LINE L1 5023 5066 -1080 1097 96 0 0 chr17 18621676 18621812 -66816668 - AluSq/x SINE Alu -177 136 1 1688 142 3 82 chr17 18621817 18622134 -66816346 - AluSx SINE Alu -20 292 1 365 175 39 10 chr17 18622137 18622240 -66816240 - L1M LINE L1 -789 5395 5290 886 132 39 0 chr17 18622293 18622422 -66816058 - AluJo SINE Alu -178 134 1 808 202 12 57 chr17 18622422 18622565 -66815915 - L1M4 LINE L1 -844 5302 5173 2488 74 0 0 chr17 18622565 18622863 -66815617 + AluY SINE Alu 1 298 -13 808 202 12 57 chr17 18622863 18622966 -66815514 - L1M4 LINE L1 -973 5173 5067 3676 150 25 59 chr17 18623009 18623282 -66815198 + L1MB7 LINE L1 5386 5667 -517 1671 191 3 7 chr17 18623282 18623575 -66814905 + AluJo SINE Alu 19 310 -2 3676 150 25 59 chr17 18623575 18624086 -66814394 + L1MB7 LINE L1 5667 6143 -41 2427 76 0 0 chr17 18624086 18624377 -66814103 - AluSg SINE Alu -19 291 1 3676 150 25 59 chr17 18624377 18624418 -66814062 + L1MB7 LINE L1 6143 6184 0 2281 89 0 36 chr17 18624628 18624815 -66813665 - AluSq SINE Alu -20 293 120 2083 133 3 10 chr17 18624815 18625115 -66813365 - AluSx SINE Alu -14 298 1 2281 89 0 36 chr17 18625115 18625231 -66813249 - AluSq SINE Alu -193 120 1 971 78 0 0 chr17 18625231 18625347 -66813133 - AluSq/x SINE Alu -196 116 1 420 250 88 22 chr17 18625349 18625485 -66812995 + L2 LINE L2 3167 3311 -2 2415 67 0 0 chr17 18625487 18625771 -66812709 - AluSp SINE Alu -27 286 3 425 258 0 0 chr17 18626745 18626842 -66811638 - MIR SINE MIR -61 147 51 22 0 0 0 chr17 18627275 18627297 -66811183 + GC_rich Low_complexity Low_complexity 1 22 0 340 217 225 43 chr17 18627881 18628019 -66810461 + MIR SINE MIR 1 163 -99 266 274 14 0 chr17 18628348 18628421 -66810059 + MIR SINE MIR 50 123 -85 24 0 0 0 chr17 18628839 18628863 -66809617 + GC_rich Low_complexity Low_complexity 1 24 0 34 55 0 0 chr17 18629032 18629087 -66809393 + GC_rich Low_complexity Low_complexity 1 55 0 305 222 0 62 chr17 18629575 18629656 -66808824 - L2 LINE L2 -75 3238 3163 1537 142 83 31 chr17 18629810 18630098 -66808382 - AluJo SINE Alu -9 303 1 2305 133 40 3 chr17 18630098 18630473 -66808007 - L1PA15 LINE L1 -6 6159 5771 2311 91 13 0 chr17 18630476 18630774 -66807706 - AluSq SINE Alu -11 302 1 1105 58 0 36 chr17 18630775 18630914 -66807566 - AluSq/x SINE Alu -179 134 1 4446 161 118 27 chr17 18630914 18631882 -66806598 - MER52A LTR ERV1 -522 1233 217 2398 55 7 0 chr17 18631928 18632218 -66806262 + AluSp SINE Alu 1 292 -21 1639 207 65 2 chr17 18632230 18632446 -66806034 - L1M4 LINE L1 -1302 4844 4643 405 0 0 0 chr17 18632446 18632491 -66805989 + (CA)n Simple_repeat Simple_repeat 2 46 0 1639 207 65 2 chr17 18632491 18632689 -66805791 - L1M4 LINE L1 -1503 4643 4404 2222 87 3 24 chr17 18632689 18633008 -66805472 - AluSp SINE Alu 0 315 3 24 0 0 0 chr17 18633012 18633036 -66805444 + AT_rich Low_complexity Low_complexity 1 24 0 274 238 14 77 chr17 18633051 18633158 -66805322 + L1MEc LINE L1 1406 1503 -4893 2519 70 0 0 chr17 18633158 18633459 -66805021 + AluY SINE Alu 1 301 -10 274 238 14 77 chr17 18633459 18633494 -66804986 + L1MEc LINE L1 1503 1539 -4857 2326 105 0 0 chr17 18633517 18633811 -66804669 + AluSx SINE Alu 1 294 -18 3695 150 32 14 chr17 18633811 18634526 -66803954 + L1MB3 LINE L1 5323 6050 -133 939 219 31 25 chr17 18634529 18634562 -66803918 + AluJo SINE Alu 85 116 -196 198 0 0 0 chr17 18634562 18634584 -66803896 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 2103 120 23 16 chr17 18634587 18634896 -66803584 + AluSx SINE Alu 1 311 -1 939 219 31 25 chr17 18634896 18635054 -66803426 + AluJo SINE Alu 117 281 -31 3131 224 51 46 chr17 18635067 18636230 -66802250 + L1MEc LINE L1 2597 3764 -2451 1248 154 0 62 chr17 18636232 18636270 -66802210 + AluJo SINE Alu 97 136 -176 2320 105 3 6 chr17 18636270 18636583 -66801897 + AluSx SINE Alu 1 312 0 2382 67 14 14 chr17 18636589 18636886 -66801594 + AluY SINE Alu 3 299 -12 1248 154 0 62 chr17 18636886 18637067 -66801413 + AluJo SINE Alu 141 309 -3 1249 207 43 7 chr17 18637068 18637348 -66801132 + L1MB7 LINE L1 5730 6019 -165 1121 153 118 25 chr17 18637349 18637539 -66800941 + AluJb SINE Alu 87 299 -13 2556 77 0 0 chr17 18637539 18637849 -66800631 + AluY SINE Alu 1 310 -1 1121 153 118 25 chr17 18637849 18637861 -66800619 + AluJb SINE Alu 299 308 -4 262 212 256 15 chr17 18637862 18637999 -66800481 + L1MB8 LINE L1 5988 6157 -21 1576 238 22 24 chr17 18638136 18638195 -66800285 + L1ME2 LINE L1 2497 2555 -3591 2139 122 3 10 chr17 18638195 18638490 -66799990 + AluSx SINE Alu 1 293 -19 1576 238 22 24 chr17 18638490 18638889 -66799591 + L1ME2 LINE L1 2555 2954 -3192 2079 115 3 3 chr17 18638909 18639197 -66799283 + AluSx SINE Alu 1 288 -24 23 0 0 0 chr17 18639197 18639220 -66799260 + AT_rich Low_complexity Low_complexity 1 23 0 2222 196 20 32 chr17 18639270 18639547 -66798933 + L1ME2 LINE L1 5330 5600 -566 2541 88 0 0 chr17 18639547 18639854 -66798626 + AluY SINE Alu 1 307 -4 2222 196 20 32 chr17 18639854 18640072 -66798408 + L1ME2 LINE L1 5600 5819 -347 2195 120 0 3 chr17 18640077 18640368 -66798112 + AluSx SINE Alu 1 290 -22 1071 169 10 33 chr17 18640328 18640372 -66798108 + AluJo SINE Alu 85 128 -184 2250 89 0 67 chr17 18640372 18640699 -66797781 + AluSg SINE Alu 1 305 -5 1071 169 10 33 chr17 18640699 18640876 -66797604 + AluJo SINE Alu 128 306 -6 664 238 29 79 chr17 18640889 18641229 -66797251 + L1ME2 LINE L1 5841 6163 -1 1928 107 7 11 chr17 18641255 18641527 -66796953 + AluSx SINE Alu 35 305 -7 1283 178 108 37 chr17 18641549 18641848 -66796632 + AluJo SINE Alu 1 318 0 307 287 74 8 chr17 18641926 18642048 -66796432 + MLT1K LTR MaLR 459 588 0 2230 111 14 0 chr17 18642142 18642439 -66796041 + AluSg SINE Alu 1 301 -9 302 260 58 0 chr17 18642631 18642735 -66795745 + MIR3 SINE MIR 57 166 -42 629 212 0 40 chr17 18643082 18643233 -66795247 + FRAM SINE Alu 1 145 -31 189 74 0 0 chr17 18643234 18643261 -66795219 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 393 274 51 17 chr17 18643266 18643383 -66795097 + MIR SINE MIR 30 149 -80 358 158 134 0 chr17 18643387 18643469 -66795011 - MLT1I LTR MaLR 0 409 317 806 107 0 0 chr17 18643498 18643601 -66794879 + AluSg/x SINE Alu 189 291 -18 2171 79 4 4 chr17 18643607 18643874 -66794606 + AluSp SINE Alu 14 280 -33 2187 103 0 39 chr17 18643884 18644194 -66794286 + AluSc SINE Alu 11 308 -1 456 293 21 4 chr17 18644211 18644384 -66794096 + MLT1E LTR MaLR 17 195 -372 216 213 0 0 chr17 18644385 18644446 -66794034 + C-rich Low_complexity Low_complexity 5 65 0 1081 245 52 42 chr17 18644452 18644811 -66793669 + MLT1E LTR MaLR 193 569 -24 182 162 54 0 chr17 18644817 18644891 -66793589 + (TA)n Simple_repeat Simple_repeat 1 78 0 372 286 0 0 chr17 18644989 18645087 -66793393 - MLT1I LTR MaLR -231 178 81 1067 133 0 0 chr17 18645192 18645335 -66793145 + AluSq/x SINE Alu 1 143 -170 2671 45 0 10 chr17 18645335 18645648 -66792832 + AluY SINE Alu 1 310 -1 2177 112 0 14 chr17 18645650 18645958 -66792522 + AluSx SINE Alu 1 304 0 719 281 188 15 chr17 18646155 18646553 -66791927 + L2 LINE L2 2846 3312 -1 2364 83 0 17 chr17 18646673 18646974 -66791506 + AluY SINE Alu 1 296 -15 2222 116 7 0 chr17 18646985 18647279 -66791201 + AluSx SINE Alu 1 296 -16 2629 61 0 0 chr17 18647279 18647589 -66790891 + AluY SINE Alu 1 310 -1 254 224 45 0 chr17 18647748 18647815 -66790665 - MER5A DNA MER1_type -5 184 115 1158 157 0 6 chr17 18647816 18647988 -66790492 - AluSg/x SINE Alu -17 293 123 503 273 0 8 chr17 18648005 18648126 -66790354 - MER5A DNA MER1_type -69 120 1 1386 167 0 14 chr17 18648471 18648686 -66789794 - AluJo SINE Alu -30 282 71 2095 138 3 0 chr17 18648825 18649130 -66789350 - AluSg SINE Alu -4 306 1 452 298 128 49 chr17 18649131 18649569 -66788911 + L2 LINE L2 2701 3194 -78 1830 151 3 11 chr17 18649569 18649878 -66788602 - AluSx SINE Alu 0 307 1 452 298 128 49 chr17 18649878 18649959 -66788521 + L2 LINE L2 3194 3267 -5 188 317 69 30 chr17 18649977 18650078 -66788402 - L2 LINE L2 -19 3253 3149 2861 130 62 42 chr17 18650096 18650690 -66787790 - MER4B LTR ERV1 -4 606 1 524 259 17 2 chr17 18650889 18651073 -66787407 - MIR SINE MIR -6 256 29 2010 77 0 49 chr17 18652136 18652275 -66786205 - AluSq SINE Alu -40 273 154 2193 78 39 0 chr17 18652275 18652559 -66785921 - AluSx SINE Alu -17 295 1 2010 77 0 49 chr17 18652559 18652706 -66785774 - AluSq SINE Alu -159 154 1 411 256 120 8 chr17 18652843 18652976 -66785504 + MIR SINE MIR 104 251 -11 199 282 14 28 chr17 18653020 18653091 -66785389 + MIR SINE MIR 81 150 -58 181 306 41 0 chr17 18653329 18653378 -66785102 + MIR SINE MIR 91 141 -67 2481 81 3 0 chr17 18653515 18653822 -66784658 + AluSx SINE Alu 1 308 -4 2012 109 0 63 chr17 18654523 18654825 -66783655 - AluSg SINE Alu -15 295 13 578 136 0 0 chr17 18654827 18654915 -66783565 - AluS SINE Alu -224 88 1 2059 132 3 10 chr17 18654969 18655273 -66783207 + AluJo SINE Alu 1 302 -10 229 330 150 21 chr17 18655631 18655862 -66782618 - L2 LINE L2 -431 2883 2593 1820 106 4 16 chr17 18655862 18656116 -66782364 + AluSg SINE Alu 44 294 -16 229 330 150 21 chr17 18656116 18656223 -66782257 - L2 LINE L2 -721 2593 2501 255 325 53 18 chr17 18656296 18656410 -66782070 + MIR SINE MIR 32 149 -59 2307 100 7 3 chr17 18656717 18657027 -66781453 - AluY SINE Alu 0 311 1 28 0 0 0 chr17 18657032 18657060 -66781420 + AT_rich Low_complexity Low_complexity 1 28 0 552 78 26 0 chr17 18657214 18657291 -66781189 + AluSg/x SINE Alu 216 294 -18 2041 123 20 0 chr17 18657302 18657594 -66780886 + AluSx SINE Alu 1 298 -14 2334 106 0 7 chr17 18657966 18658267 -66780213 + AluSg SINE Alu 1 299 -11 1514 156 118 15 chr17 18658665 18658822 -66779658 - AluJo SINE Alu -21 291 152 1851 178 0 13 chr17 18658822 18659120 -66779360 - AluJb SINE Alu -18 294 1 1514 156 118 15 chr17 18659120 18659225 -66779255 - AluJo SINE Alu -160 152 2 645 204 188 6 chr17 18659274 18659450 -66779030 + MER3 DNA MER1_type 1 208 -1 1696 204 21 0 chr17 18659774 18660063 -66778417 - AluJo SINE Alu -17 295 1 2247 106 3 0 chr17 18660256 18660548 -66777932 - AluSx SINE Alu -19 293 1 902 121 0 57 chr17 18660548 18660689 -66777791 - AluSg SINE Alu -177 133 1 302 326 45 0 chr17 18660769 18660858 -66777622 + L1MC4 LINE L1 6610 6702 -1340 2181 72 28 21 chr17 18660860 18661151 -66777329 - AluSp SINE Alu -20 293 1 1921 150 17 10 chr17 18661240 18661540 -66776940 - AluJo SINE Alu -10 302 1 840 236 50 117 chr17 18662242 18662520 -66775960 - L1MC4 LINE L1 0 8042 7812 2187 95 7 7 chr17 18662520 18662814 -66775666 - AluSx SINE Alu -18 294 1 840 236 50 117 chr17 18662814 18663039 -66775441 - L1MC4 LINE L1 -230 7812 7573 1950 157 0 22 chr17 18663070 18663242 -66775238 - AluSx SINE Alu -7 305 142 2103 94 0 0 chr17 18663242 18663507 -66774973 - AluSx SINE Alu -8 304 40 1950 157 0 22 chr17 18663507 18663646 -66774834 - AluSx SINE Alu -170 142 1 2250 102 0 3 chr17 18663839 18664149 -66774331 - AluSc SINE Alu 0 310 2 2760 45 0 0 chr17 18665499 18665807 -66772673 + AluY SINE Alu 1 308 -3 1131 190 146 13 chr17 18666154 18666470 -66772010 - L1MB7 LINE L1 0 6184 5827 686 81 61 0 chr17 18666571 18666670 -66771810 + L1MB3 LINE L1 5880 5984 -199 192 366 32 8 chr17 18667676 18667799 -66770681 + L3 LINE CR1 1251 1376 -201 225 0 0 0 chr17 18668740 18668765 -66769715 + (T)n Simple_repeat Simple_repeat 1 25 0 5073 232 71 22 chr17 18668849 18669614 -66768866 - L1MC3 LINE L1 -2 7783 7057 2105 156 26 21 chr17 18669614 18670044 -66768436 - MSTB1 LTR MaLR 0 432 1 5073 232 71 22 chr17 18670044 18670710 -66767770 - L1MC3 LINE L1 -728 7057 6281 2596 74 0 0 chr17 18670875 18671184 -66767296 + AluY SINE Alu 1 309 -2 4349 105 24 6 chr17 18671196 18671870 -66766610 + L1PA13 LINE L1 5478 6163 0 278 341 41 8 chr17 18672002 18672125 -66766355 - MIR SINE MIR -34 228 102 1153 230 20 8 chr17 18672165 18672413 -66766067 + Tigger3(Golem) DNA MER2_type 2788 3038 0 269 284 0 27 chr17 18672413 18672487 -66765993 - MIR SINE MIR -160 102 31 203 310 194 8 chr17 18673875 18674004 -66764476 - MIR SINE MIR -5 257 105 367 252 58 0 chr17 18675599 18675702 -66762778 + MIR SINE MIR 47 155 -107 2313 171 44 26 chr17 18675712 18676209 -66762271 + L1MB5 LINE L1 5545 6050 -124 30 59 0 0 chr17 18677437 18677488 -66760992 + AT_rich Low_complexity Low_complexity 1 51 0 541 250 31 16 chr17 18677771 18677973 -66760507 + L1MB7 LINE L1 5904 6129 -53 2523 189 80 37 chr17 18678934 18679364 -66759116 + L1MB4 LINE L1 4969 5379 -801 1659 142 24 45 chr17 18679364 18679652 -66758828 + AluJo SINE Alu 30 311 -1 2523 189 80 37 chr17 18679652 18680114 -66758366 + L1MB4 LINE L1 5379 5885 -295 1424 145 0 23 chr17 18680298 18680519 -66757961 - AluSg/x SINE Alu -15 295 80 1311 54 109 11 chr17 18680518 18680702 -66757778 - AluY SINE Alu -16 295 94 * 2140 109 3 23 chr17 18682488 18682812 -66755668 + AluSx SINE Alu 2 312 0 415 244 87 23 chr17 18684610 18684782 -66753698 + MER53 DNA DNA 3 185 -4 21 0 0 0 chr17 18686980 18687001 -66751479 + GC_rich Low_complexity Low_complexity 1 21 0 333 158 33 87 chr17 18687208 18687392 -66751088 + (CACGT)n Simple_repeat Simple_repeat 4 177 0 1027 186 48 8 chr17 18688107 18688355 -66750125 + L1MD3 LINE L1 7736 7993 -2 1026 218 128 26 chr17 18688343 18688551 -66749929 + L1ME1 LINE L1 5585 5770 -396 * 1710 168 7 45 chr17 18688551 18688860 -66749620 + AluJb SINE Alu 1 297 -15 1026 218 128 26 chr17 18688860 18689100 -66749380 + L1ME1 LINE L1 5770 6098 -68 250 215 156 30 chr17 18689015 18689150 -66749330 + L1MA10 LINE L1 6169 6320 -14 * 2404 78 0 0 chr17 18689151 18689447 -66749033 - AluSg1 SINE Alu -13 296 1 2261 99 3 20 chr17 18689447 18689750 -66748730 - AluY SINE Alu -12 299 2 324 235 34 67 chr17 18689774 18689893 -66748587 + MIR3 SINE MIR 42 156 -52 929 117 7 0 chr17 18690072 18690217 -66748263 - L1MA3 LINE L1 0 6305 6160 237 83 0 0 chr17 18690218 18690254 -66748226 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 2335 67 0 11 chr17 18690254 18690538 -66747942 - AluY SINE Alu -30 281 1 2141 104 45 0 chr17 18690541 18690830 -66747650 - AluSx SINE Alu -10 302 1 2031 110 3 10 chr17 18690831 18691139 -66747341 - AluSq SINE Alu -7 306 1 245 182 23 57 chr17 18691140 18691228 -66747252 + L1MA9 LINE L1 6209 6293 -19 1537 75 5 28 chr17 18691271 18691483 -66746997 - AluJb SINE Alu -105 207 1 2014 102 13 13 chr17 18691775 18692078 -66746402 + AluSg SINE Alu 1 303 -7 1461 219 0 0 chr17 18692672 18692969 -66745511 - AluY SINE Alu -14 297 1 623 126 0 21 chr17 18693102 18693197 -66745283 - AluS SINE Alu -215 97 5 1146 226 0 25 chr17 18693213 18693487 -66744993 - L1M4 LINE L1 -1114 5032 4766 1980 138 0 3 chr17 18693487 18693785 -66744695 - AluSx SINE Alu -15 297 1 236 252 204 14 chr17 18693811 18693958 -66744522 - MER112 DNA MER1_type -48 212 38 262 269 125 0 chr17 18694031 18694135 -66744345 - Charlie2 DNA MER1_type -2429 353 237 2023 103 45 3 chr17 18694222 18694343 -66744137 + AluSx SINE Alu 1 116 -196 243 0 0 0 chr17 18694343 18694370 -66744110 + (CA)n Simple_repeat Simple_repeat 2 28 0 2023 103 45 3 chr17 18694370 18694539 -66743941 + AluSx SINE Alu 116 303 -9 1726 177 3 0 chr17 18694581 18694875 -66743605 + AluJo SINE Alu 15 309 -3 1951 93 36 4 chr17 18694875 18695155 -66743325 + AluY SINE Alu 1 289 -22 2271 92 0 3 chr17 18698447 18698751 -66739729 + AluY SINE Alu 1 303 -8 1561 152 0 22 chr17 18700364 18700634 -66737846 + AluSx SINE Alu 11 274 -38 180 97 0 0 chr17 18700644 18700675 -66737805 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 2112 99 3 13 chr17 18700863 18701167 -66737313 + AluSq SINE Alu 12 312 -1 1089 177 4 65 chr17 18701177 18701257 -66737223 - AluJb SINE Alu -88 224 141 2165 87 0 10 chr17 18701257 18701556 -66736924 - AluY SINE Alu -6 305 10 1089 177 4 65 chr17 18701556 18701707 -66736773 - AluJb SINE Alu -171 141 7 21 0 0 0 chr17 18703670 18703691 -66734789 + AT_rich Low_complexity Low_complexity 1 21 0 1942 121 7 17 chr17 18703693 18703990 -66734490 - AluSx SINE Alu -18 294 1 1235 195 0 111 chr17 18703992 18704326 -66734154 - AluJb SINE Alu -4 298 2 1965 128 3 0 chr17 18704348 18704638 -66733842 - AluSx SINE Alu -1 311 21 239 172 86 0 chr17 18704682 18704740 -66733740 + MER3 DNA MER1_type 144 206 -3 660 203 0 8 chr17 18705226 18705349 -66733131 - L1MB3 LINE L1 -8 6175 6054 928 221 14 14 chr17 18705352 18705565 -66732915 - L1MB3 LINE L1 -176 6007 5795 364 347 57 11 chr17 18705855 18706120 -66732360 + L2 LINE L2 2579 2855 -459 1898 100 11 7 chr17 18707192 18707493 -66730987 - AluSq SINE Alu 0 312 11 379 329 37 6 chr17 18708262 18708426 -66730054 + MIR SINE MIR 89 257 -5 1483 171 29 41 chr17 18709048 18709229 -66729251 - AluJo SINE Alu -1 311 134 1666 151 0 33 chr17 18709229 18709534 -66728946 - AluSg SINE Alu -11 299 5 1483 171 29 41 chr17 18709534 18709667 -66728813 - AluJo SINE Alu -178 134 1 1848 130 0 43 chr17 18710140 18710463 -66728017 + AluSx SINE Alu 1 309 -3 320 297 128 0 chr17 18711451 18711599 -66726881 - MLT1I LTR MaLR -15 394 228 2145 101 3 10 chr17 18711612 18711919 -66726561 + AluSx SINE Alu 1 305 -7 1453 100 0 19 chr17 18712747 18712957 -66725523 - AluSq SINE Alu -103 210 5 248 311 114 21 chr17 18713201 18713394 -66725086 - L1MC5 LINE L1 -492 7469 7259 267 286 57 29 chr17 18714598 18714703 -66723777 + MIR SINE MIR 122 229 -33 1640 148 7 11 chr17 18714703 18714986 -66723494 + AluJo SINE Alu 13 294 -18 709 186 0 131 chr17 18714986 18715207 -66723273 + L1PA16 LINE L1 5964 6155 -11 1914 82 0 32 chr17 18715209 18715488 -66722992 + AluSg SINE Alu 41 310 0 2004 86 16 23 chr17 18716373 18716676 -66721804 + AluSg SINE Alu 1 301 -9 297 242 44 81 chr17 18717246 18717395 -66721085 + L1MC4 LINE L1 7458 7675 -207 390 270 61 17 chr17 18719413 18719528 -66718952 + MIR SINE MIR 93 212 -50 2265 100 6 0 chr17 18720461 18720772 -66717708 - AluSq SINE Alu 0 313 1 2016 104 17 0 chr17 18722301 18722589 -66715891 - AluSq SINE Alu -20 293 1 874 141 0 0 chr17 18724375 18724503 -66713977 - AluJb SINE Alu -27 285 158 240 122 0 0 chr17 18725482 18725523 -66712957 + (GGAA)n Simple_repeat Simple_repeat 3 43 0 183 205 0 0 chr17 18726079 18726118 -66712362 + (TAA)n Simple_repeat Simple_repeat 1 39 0 219 69 0 0 chr17 18726327 18726356 -66712124 + (CCGGA)n Simple_repeat Simple_repeat 5 33 0 2434 40 0 3 chr17 18727581 18727878 -66710602 + AluY SINE Alu 1 296 -15 2055 87 4 11 chr17 18731635 18731912 -66706568 - AluSg SINE Alu -35 275 1 1048 75 0 0 chr17 18731912 18732045 -66706435 - AluSg SINE Alu -177 133 1 1619 161 3 47 chr17 18732049 18732139 -66706341 - 7SLRNA srpRNA srpRNA -12 308 216 1848 157 3 13 chr17 18732139 18732445 -66706035 - AluJb SINE Alu -9 303 1 1619 161 3 47 chr17 18732445 18732652 -66705828 - 7SLRNA srpRNA srpRNA -104 216 24 1883 138 20 7 chr17 18732856 18733153 -66705327 + AluJb SINE Alu 1 301 -11 250 71 0 0 chr17 18736262 18736304 -66702176 - AluY SINE Alu -2 299 258 1691 78 5 0 chr17 18736304 18736522 -66701958 - AluY SINE Alu -90 221 3 35 0 0 0 chr17 18740860 18740895 -66697585 + AT_rich Low_complexity Low_complexity 1 35 0 713 126 0 0 chr17 18740893 18740996 -66697484 - U6 snRNA snRNA -4 103 1 1168 126 135 0 chr17 18748174 18748381 -66690099 - MER46A DNA MER2_type 0 236 2 186 301 140 44 chr17 18748772 18748908 -66689572 - MIR3 SINE MIR -23 185 37 192 319 195 26 chr17 18748975 18749088 -66689392 + L2 LINE L2 3151 3282 -31 270 303 18 18 chr17 18749258 18749367 -66689113 + MIR SINE MIR 49 157 -105 2358 95 3 0 chr17 18750697 18750992 -66687488 - AluSc SINE Alu -13 296 1 272 269 67 10 chr17 18751101 18751205 -66687275 + Tigger8 DNA MER2_type 232 341 -325 186 217 22 0 chr17 18751936 18751982 -66686498 + L2 LINE L2 3136 3182 -90 2384 81 24 0 chr17 18753224 18753519 -66684961 - AluSp SINE Alu -11 302 1 2193 114 31 0 chr17 18755528 18755818 -66682662 + AluSx SINE Alu 1 299 -13 182 246 188 0 chr17 18757290 18757359 -66681121 - L2 LINE L2 -668 2646 2565 2321 102 3 0 chr17 18757654 18757948 -66680532 + AluSx SINE Alu 3 297 -15 942 175 113 5 chr17 18758023 18758217 -66680263 + MER46A DNA MER2_type 14 228 -8 218 336 44 26 chr17 18758761 18758874 -66679606 + MIR3 SINE MIR 51 165 -43 2586 76 0 0 chr17 18759540 18759844 -66678636 + AluSp SINE Alu 3 306 -7 1943 117 26 39 chr17 18759851 18760048 -66678432 + AluSq SINE Alu 1 194 -119 2490 75 0 0 chr17 18760048 18760342 -66678138 - AluY SINE Alu -17 294 1 1943 117 26 39 chr17 18760342 18760451 -66678029 + AluSq SINE Alu 194 303 -10 1658 148 0 123 chr17 18760453 18760608 -66677872 + AluJo SINE Alu 1 91 -221 2490 65 0 3 chr17 18760608 18760901 -66677579 - AluY SINE Alu -19 292 1 1658 148 0 123 chr17 18760901 18761096 -66677384 + AluJo SINE Alu 91 308 -4 769 165 0 0 chr17 18761638 18761771 -66676709 - FLAM_C SINE Alu 0 133 1 2268 103 0 10 chr17 18761771 18762108 -66676372 - AluSc SINE Alu 0 309 1 2258 115 6 6 chr17 18762519 18762831 -66675649 - AluSp SINE Alu -1 312 1 1917 163 3 0 chr17 18763440 18763741 -66674739 - AluJb SINE Alu -10 302 1 1291 117 0 0 chr17 18764882 18765045 -66673435 + AluSg/x SINE Alu 126 288 -22 227 207 35 17 chr17 18765090 18765148 -66673332 - MLT1J LTR MaLR -112 399 341 2718 51 0 0 chr17 18765527 18765838 -66672642 - AluY SINE Alu 0 311 1 2332 115 0 0 chr17 18765968 18766272 -66672208 - AluSx SINE Alu -8 304 1 271 220 0 0 chr17 18766273 18766323 -66672157 - AluJo SINE Alu -168 134 85 1529 184 57 21 chr17 18766463 18766745 -66671735 + AluJo SINE Alu 1 292 -20 21 71 0 0 chr17 18766983 18767025 -66671455 + AT_rich Low_complexity Low_complexity 1 42 0 22 0 0 0 chr17 18767088 18767110 -66671370 + AT_rich Low_complexity Low_complexity 1 22 0 2382 86 0 32 chr17 18767152 18767466 -66671014 - AluY SINE Alu -7 304 1 1956 145 3 0 chr17 18767472 18767804 -66670676 - AluSx SINE Alu 0 333 1 1226 114 0 45 chr17 18767866 18768042 -66670438 - AluSg/x SINE Alu -11 299 132 2259 117 3 7 chr17 18768042 18768351 -66670129 - AluSc SINE Alu -1 308 1 2416 91 7 3 chr17 18768533 18768842 -66669638 - AluSg SINE Alu 0 310 1 1732 169 20 17 chr17 18769051 18769347 -66669133 - AluJb SINE Alu -15 297 1 1075 131 0 0 chr17 18769356 18769509 -66668971 - AluSg/x SINE Alu -5 305 153 216 0 0 0 chr17 18770124 18770148 -66668332 + (ATTG)n Simple_repeat Simple_repeat 4 27 0 1621 194 0 14 chr17 18770148 18770432 -66668048 - AluJo SINE Alu -32 280 1 921 179 45 6 chr17 18770761 18770940 -66667540 + MER20 DNA MER1_type 1 186 -33 298 208 14 0 chr17 18771004 18771076 -66667404 + MER20 DNA MER1_type 146 218 -1 1007 226 107 76 chr17 18771123 18771292 -66667188 - L1ME3A LINE L1 -10 6160 5998 2380 51 58 0 chr17 18771292 18771568 -66666912 - AluY SINE Alu -19 292 1 1007 226 107 76 chr17 18771568 18771781 -66666699 - L1ME3A LINE L1 -172 5998 5793 2217 98 24 10 chr17 18771781 18772076 -66666404 + AluSq SINE Alu 1 299 -14 2329 96 0 13 chr17 18772078 18772380 -66666100 + AluY SINE Alu 1 298 -13 1007 226 107 76 chr17 18772380 18772440 -66666040 - L1ME3A LINE L1 -377 5793 5700 1522 124 0 5 chr17 18772900 18773117 -66665363 + AluSg/x SINE Alu 83 298 -12 319 305 38 19 chr17 18773154 18773167 -66665313 + L2 LINE L2 3193 3204 -109 1548 131 40 44 chr17 18773167 18773444 -66665036 + L1MB5 LINE L1 5855 6133 -41 2092 113 7 14 chr17 18773444 18773580 -66664900 + AluSx SINE Alu 1 136 -173 2386 100 3 0 chr17 18773580 18773881 -66664599 + AluSp SINE Alu 1 302 -11 2092 113 7 14 chr17 18773881 18774055 -66664425 + AluSx SINE Alu 136 309 0 1548 131 40 44 chr17 18774055 18774097 -66664383 + L1MB5 LINE L1 6133 6174 0 319 305 38 19 chr17 18774097 18774188 -66664292 + L2 LINE L2 3204 3299 -14 644 182 16 0 chr17 18774605 18774726 -66663754 + AluSg/x SINE Alu 189 311 -1 2134 114 3 14 chr17 18774755 18775052 -66663428 + AluSx SINE Alu 1 294 -18 691 224 152 19 chr17 18775459 18775723 -66662757 + MER46C DNA MER2_type 39 337 -1 703 115 31 46 chr17 18776750 18776880 -66661600 + FLAM_C SINE Alu 4 131 -2 22 0 0 0 chr17 18776907 18776929 -66661551 + AT_rich Low_complexity Low_complexity 1 22 0 1158 170 50 9 chr17 18776985 18777203 -66661277 - AluJb SINE Alu -8 304 78 2147 116 13 3 chr17 18777565 18777867 -66660613 + AluSq SINE Alu 1 305 -8 255 237 0 140 chr17 18777943 18777988 -66660492 - MER58A DNA MER1_type -257 84 57 2444 92 7 0 chr17 18777988 18778292 -66660188 + AluSq SINE Alu 1 306 -7 255 237 0 140 chr17 18778292 18778339 -66660141 - MER58A DNA MER1_type -284 57 5 251 227 76 0 chr17 18778777 18778843 -66659637 + LTR50 LTR ERVL 25 95 -700 377 252 30 23 chr17 18779031 18779142 -66659338 + LTR50 LTR ERVL 540 654 -141 1952 138 10 3 chr17 18779142 18779433 -66659047 - AluSx SINE Alu -19 293 1 377 252 30 23 chr17 18779433 18779452 -66659028 + LTR50 LTR ERVL 654 671 -124 2509 70 0 3 chr17 18780113 18780411 -66658069 - AluY SINE Alu -14 297 1 1129 139 57 53 chr17 18781351 18781560 -66656920 - THE1B LTR MaLR 0 364 155 2025 127 0 14 chr17 18781560 18781877 -66656603 + AluY SINE Alu 1 313 0 2250 85 54 0 chr17 18782465 18782760 -66655720 + AluY SINE Alu 1 311 0 2202 90 38 0 chr17 18782777 18783066 -66655414 + AluSg SINE Alu 1 300 -10 632 60 0 0 chr17 18784296 18784401 -66654079 + AluSg/x SINE Alu 196 300 0 2300 71 7 17 chr17 18784617 18784914 -66653566 - AluSc SINE Alu -15 294 1 2321 57 3 27 chr17 18785228 18785528 -66652952 + AluSq SINE Alu 1 293 -20 1349 156 3 122 chr17 18787874 18788222 -66650258 - AluJb SINE Alu 0 310 1 2436 70 7 3 chr17 18788222 18788521 -66649959 - AluY SINE Alu -10 301 1 608 51 0 0 chr17 18788521 18788599 -66649881 - AluSg SINE Alu -176 134 57 1335 132 5 0 chr17 18788599 18788788 -66649692 - AluSx SINE Alu -121 191 2 2224 124 0 9 chr17 18788836 18789151 -66649329 + AluSx SINE Alu 1 312 0 2412 113 3 0 chr17 18789328 18789639 -66648841 + AluSq SINE Alu 1 312 -1 2472 76 0 7 chr17 18789727 18790031 -66648449 - AluY SINE Alu -9 302 1 935 123 0 36 chr17 18790032 18790170 -66648310 - AluJo SINE Alu -173 139 7 2042 119 7 10 chr17 18792138 18792432 -66646048 - AluSx SINE Alu -19 293 1 1279 195 0 108 chr17 18792434 18792767 -66645713 - AluJb SINE Alu -4 298 2 203 61 30 0 chr17 18792773 18792806 -66645674 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1934 119 4 0 chr17 18792809 18793078 -66645402 - AluSx SINE Alu -22 290 21 21 0 0 0 chr17 18793122 18793143 -66645337 + AT_rich Low_complexity Low_complexity 1 21 0 680 203 0 8 chr17 18793662 18793785 -66644695 - L1MB3 LINE L1 -8 6175 6054 848 224 24 9 chr17 18793788 18793998 -66644482 - L1MB3 LINE L1 -176 6007 5795 377 351 49 30 chr17 18794242 18794547 -66643933 + L2 LINE L2 2545 2855 -459 2047 104 11 0 chr17 18795604 18795912 -66642568 - AluSq SINE Alu 0 311 1 403 335 37 6 chr17 18796650 18796814 -66641666 + MIR SINE MIR 89 257 -5 1635 174 29 29 chr17 18797434 18797614 -66640866 - AluJo SINE Alu -1 311 129 1955 132 7 7 chr17 18797614 18797909 -66640571 - AluSg SINE Alu -11 299 5 1635 174 29 29 chr17 18797909 18798039 -66640441 - AluJo SINE Alu -182 130 1 2065 122 3 10 chr17 18798506 18798817 -66639663 + AluSx SINE Alu 1 309 -3 290 310 129 0 chr17 18799783 18799938 -66638542 - MLT1I LTR MaLR -7 402 228 2276 102 3 0 chr17 18799950 18800254 -66638226 + AluSx SINE Alu 1 305 -7 1645 94 0 0 chr17 18801075 18801288 -66637192 - AluSq SINE Alu -100 213 1 251 312 122 5 chr17 18801524 18801713 -66636767 - L1MC5 LINE L1 -492 7469 7259 419 253 27 47 chr17 18804724 18804874 -66633606 + MER77 LTR ERV1 54 200 -405 563 274 135 41 chr17 18805032 18805339 -66633141 + MER77 LTR ERV1 303 711 -62 1546 190 60 3 chr17 18805339 18805459 -66633021 + AluJo SINE Alu 1 113 -199 348 24 0 0 chr17 18805459 18805500 -66632980 + (TAA)n Simple_repeat Simple_repeat 2 42 0 1546 190 60 3 chr17 18805500 18805663 -66632817 + AluJo SINE Alu 113 300 -12 563 274 135 41 chr17 18805663 18805728 -66632752 + MER77 LTR ERV1 711 768 -5 198 0 0 0 chr17 18805790 18805812 -66632668 + (T)n Simple_repeat Simple_repeat 1 22 0 3379 202 128 60 chr17 18806587 18807003 -66631477 - Charlie1 DNA MER1_type 0 2761 2375 2230 99 3 0 chr17 18807003 18807296 -66631184 - AluSx SINE Alu -16 296 3 3379 202 128 60 chr17 18807296 18808131 -66630349 - Charlie1 DNA MER1_type -386 2375 1425 397 227 52 10 chr17 18808135 18808232 -66630248 - Charlie1 DNA MER1_type -2647 114 14 335 333 56 28 chr17 18808391 18808571 -66629909 - L1ME LINE L1 -345 5776 5592 2368 68 0 0 chr17 18811641 18811934 -66626546 - AluSc SINE Alu -16 293 1 212 267 67 13 chr17 18813058 18813133 -66625347 - MIR SINE MIR -90 118 40 294 308 79 26 chr17 18816466 18816672 -66621808 + MIR SINE MIR 24 241 -21 1771 132 0 0 chr17 18818854 18819097 -66619383 - AluSx SINE Alu -69 243 1 315 0 0 0 chr17 18820046 18820081 -66618399 + (CTG)n Simple_repeat Simple_repeat 1 35 0 1940 156 99 3 chr17 18820530 18820863 -66617617 + MLT1A1 LTR MaLR 1 365 0 221 325 0 0 chr17 18820885 18820965 -66617515 + (CA)n Simple_repeat Simple_repeat 1 80 0 187 387 28 9 chr17 18823922 18824028 -66614452 - MIR SINE MIR -71 191 84 275 324 88 15 chr17 18825311 18825447 -66613033 + MIR3 SINE MIR 18 163 -45 260 244 0 8 chr17 18825869 18825999 -66612481 + GA-rich Low_complexity Low_complexity 1 128 0 279 240 120 0 chr17 18831954 18832054 -66606426 - Charlie7 DNA MER1_type -2500 112 1 307 91 0 0 chr17 18832225 18832269 -66606211 + MIR SINE MIR 104 147 -61 1982 96 0 119 chr17 18832419 18832772 -66605708 - AluSx SINE Alu -1 311 1 2463 192 94 16 chr17 18832781 18833395 -66605085 - L1MB7 LINE L1 0 6184 5523 1816 129 0 23 chr17 18833635 18833937 -66604543 + AluSg SINE Alu 1 295 -15 3694 183 59 24 chr17 18833937 18834222 -66604258 + L1MB7 LINE L1 4766 5039 -1145 1938 119 39 3 chr17 18834222 18834507 -66603973 + AluSx SINE Alu 1 295 -17 3694 183 59 24 chr17 18834507 18834704 -66603776 + L1MB7 LINE L1 5039 5228 -956 1426 150 82 75 chr17 18834704 18834998 -66603482 - AluJo SINE Alu -16 296 1 3694 183 59 24 chr17 18834998 18835893 -66602587 + L1MB7 LINE L1 5228 6184 0 2490 58 0 6 chr17 18836243 18836554 -66601926 - AluY SINE Alu -2 309 1 2257 94 0 0 chr17 18837020 18837317 -66601163 + AluSg SINE Alu 1 297 -13 1844 125 0 39 chr17 18837347 18837659 -66600821 + AluSp SINE Alu 1 300 -13 497 66 0 0 chr17 18888087 18888148 -66550332 - Alu SINE Alu -256 62 2 464 239 141 27 chr17 18888339 18888523 -66549957 + L2 LINE L2 3098 3302 -11 309 230 18 97 chr17 18888532 18888645 -66549835 - MIR SINE MIR -147 115 12 659 237 158 28 chr17 18889363 18889585 -66548895 - MIR SINE MIR -12 250 1 188 57 0 57 chr17 18889628 18889663 -66548817 + (TTTA)n Simple_repeat Simple_repeat 4 36 0 2373 93 0 10 chr17 18889766 18890068 -66548412 + AluSq SINE Alu 1 299 -14 591 255 32 0 chr17 18890447 18890635 -66547845 + L1M4 LINE L1 2840 3033 -3113 836 209 22 44 chr17 18891360 18891390 -66547090 - L1 LINE L1 -2404 3742 3713 5245 194 14 0 chr17 18891390 18892568 -66545912 - L1PA16 LINE L1 -1 6165 4981 836 209 22 44 chr17 18892568 18892762 -66545718 - L1 LINE L1 -2433 3713 3523 1884 167 0 0 chr17 18892879 18893185 -66545295 + AluSx SINE Alu 7 312 0 26 0 0 0 chr17 18893185 18893211 -66545269 + AT_rich Low_complexity Low_complexity 1 26 0 227 179 0 0 chr17 18893624 18893663 -66544817 - MLT1H LTR MaLR -2 547 509 613 244 81 53 chr17 18893699 18893945 -66544535 - MLT1H LTR MaLR -218 331 79 299 292 67 42 chr17 18894226 18894346 -66544134 - MIR SINE MIR -119 143 21 332 303 184 0 chr17 18895245 18895397 -66543083 + MIR SINE MIR 22 201 -61 439 289 37 0 chr17 18895608 18895743 -66542737 - LTR52 LTR ERVL -3 418 279 403 211 92 14 chr17 18896324 18896466 -66542014 - MLT1C LTR MaLR -203 264 112 247 286 117 62 chr17 18896497 18896805 -66541675 - MLT1H LTR MaLR -102 447 123 217 301 133 0 chr17 18897176 18897289 -66541191 + MIR3 SINE MIR 70 197 -11 2550 212 55 9 chr17 18897473 18898054 -66540426 + L1MB7 LINE L1 5559 6166 -18 228 286 66 22 chr17 18898320 18898411 -66540069 - MER94 DNA DNA 0 134 40 2046 184 6 3 chr17 18898413 18898756 -66539724 - MER2 DNA MER2_type 0 344 1 720 204 10 3 chr17 18900130 18900429 -66538051 + GA-rich Low_complexity Low_complexity 1 301 0 582 209 0 0 chr17 18900926 18901060 -66537420 + (TG)n Simple_repeat Simple_repeat 2 135 0 1620 167 34 78 chr17 18901430 18901838 -66536642 - MLT1B LTR MaLR 0 390 1 408 301 98 0 chr17 18902398 18902551 -66535929 + L2 LINE L2 2494 2661 -653 896 239 8 51 chr17 18902553 18902787 -66535693 - MER58A DNA MER1_type 0 224 1 1317 211 11 18 chr17 18902842 18903126 -66535354 + AluJo SINE Alu 1 282 -30 321 118 0 0 chr17 18903133 18903184 -66535296 + (TA)n Simple_repeat Simple_repeat 1 51 0 213 65 0 0 chr17 18903183 18903214 -66535266 + (TG)n Simple_repeat Simple_repeat 2 32 0 * 303 248 119 28 chr17 18903221 18903330 -66535150 - L1MEc LINE L1 -4339 2057 1939 354 206 6 26 chr17 18903970 18904201 -66534279 - HSAT5 Satellite Satellite -2 226 1 199 331 49 68 chr17 18905019 18905182 -66533298 - MIR SINE MIR -19 243 84 260 355 45 26 chr17 18905835 18905990 -66532490 - MIR SINE MIR -21 241 84 2072 122 0 0 chr17 18909850 18910146 -66528334 + AluSq SINE Alu 1 296 -17 186 143 0 0 chr17 18914431 18914466 -66524014 + (TCC)n Simple_repeat Simple_repeat 2 36 0 189 0 0 0 chr17 18916020 18916041 -66522439 + (CAGC)n Simple_repeat Simple_repeat 4 24 0 253 376 18 0 chr17 18916433 18916542 -66521938 + ERVL LTR ERVL 4243 4353 -1411 21 36 0 0 chr17 18916905 18916933 -66521547 + AT_rich Low_complexity Low_complexity 1 28 0 2177 146 6 0 chr17 18917073 18917423 -66521057 + MER41B LTR ERV1 1 352 -283 1308 110 5 5 chr17 18917423 18917623 -66520857 - MER4E LTR ERV1 0 766 567 530 62 38 12 chr17 18917622 18917702 -66520778 - MER4B LTR ERV1 -358 252 171 * 2704 74 11 3 chr17 18917707 18918084 -66520396 - MER41A LTR ERV1 -174 380 1 438 279 130 0 chr17 18919206 18919367 -66519113 + MER5A DNA MER1_type 6 187 -2 484 138 28 10 chr17 18919746 18919992 -66518488 + AluSx SINE Alu 1 296 -13 2347 68 0 7 chr17 18920509 18920805 -66517675 - AluY SINE Alu -16 295 2 959 77 23 0 chr17 18920824 18920954 -66517526 - AluSq/x SINE Alu -179 133 1 714 279 135 16 chr17 18921067 18921563 -66516917 + L2 LINE L2 2544 3103 -210 390 224 18 109 chr17 18921931 18922051 -66516429 - L1MD3 LINE L1 0 7995 7892 1549 71 0 0 chr17 18922051 18922248 -66516232 + AluY SINE Alu 103 299 -12 390 224 18 109 chr17 18922248 18922292 -66516188 - L1MD3 LINE L1 -103 7892 7846 1575 140 3 129 chr17 18922294 18922651 -66515829 + AluJo SINE Alu 1 312 0 539 181 7 81 chr17 18922909 18923058 -66515422 + MER20 DNA MER1_type 30 167 -52 492 275 8 8 chr17 18923721 18923852 -66514628 + MIR SINE MIR 20 150 -58 1100 177 0 5 chr17 18924050 18924248 -66514232 - AluJo SINE Alu -18 294 98 2045 108 0 3 chr17 18924296 18924582 -66513898 - AluSq SINE Alu -7 306 22 3291 227 41 18 chr17 18924594 18924813 -66513667 - L1M4 LINE L1 -1227 4919 4707 1374 174 15 67 chr17 18924813 18925141 -66513339 - AluJo SINE Alu -1 311 1 3291 227 41 18 chr17 18925141 18925825 -66512655 - L1M4 LINE L1 -1439 4707 3995 977 132 13 0 chr17 18925834 18925986 -66512494 + AluJb SINE Alu 11 164 -148 * 1033 161 6 0 chr17 18925985 18926146 -66512334 - AluSx SINE Alu -150 162 1 2361 175 50 19 chr17 18926146 18926609 -66511871 + L1MB7 LINE L1 5698 6174 -10 421 135 48 127 chr17 18927340 18927389 -66511091 + MER103 DNA DNA 4 55 -111 2335 84 7 0 chr17 18927389 18927698 -66510782 + AluSq SINE Alu 1 311 -2 421 135 48 127 chr17 18927698 18927774 -66510706 + MER103 DNA DNA 55 119 -47 402 278 31 52 chr17 18928514 18928705 -66509775 + L2 LINE L2 2917 3103 -169 665 297 12 40 chr17 18928711 18928960 -66509520 + MIR SINE MIR 7 248 -14 362 380 63 11 chr17 18929218 18929489 -66508991 + L1ME LINE L1 5355 5639 -531 3920 133 33 18 chr17 18929684 18930314 -66508166 - MER51C LTR ERV1 0 640 1 294 106 0 0 chr17 18930352 18930399 -66508081 + (CA)n Simple_repeat Simple_repeat 1 47 0 278 244 148 0 chr17 18931298 18931413 -66507067 - MLT1E2 LTR MaLR -269 357 226 604 277 83 22 chr17 18932135 18932413 -66506067 + L2 LINE L2 3019 3313 0 5266 155 29 10 chr17 18932427 18932954 -66505526 + L1PA16 LINE L1 4475 4991 -1175 2083 84 0 0 chr17 18932954 18933227 -66505253 + AluY SINE Alu 37 309 -2 5266 155 29 10 chr17 18933227 18934337 -66504143 + L1PA16 LINE L1 4991 6145 -21 360 0 0 0 chr17 18934704 18934744 -66503736 + (CA)n Simple_repeat Simple_repeat 1 40 0 834 122 0 0 chr17 18935246 18935369 -66503111 - FRAM SINE Alu -8 168 46 598 253 130 0 chr17 18935701 18935962 -66502518 + L1M4 LINE L1 5011 5305 -841 2305 103 0 0 chr17 18935985 18936297 -66502183 - AluSx SINE Alu 0 312 1 8536 102 6 5 chr17 18936370 18938196 -66500284 - L1PA8A LINE L1 -258 5873 4052 1237 255 25 68 chr17 18938182 18938770 -66499710 + L1MC/D LINE L1 5219 5780 -746 * 1707 307 108 73 chr17 18939349 18940073 -66498407 + L1M4 LINE L1 2972 3669 -2477 2095 80 3 21 chr17 18940073 18940396 -66498084 + AluY SINE Alu 1 318 0 1707 307 108 73 chr17 18940396 18940661 -66497819 + L1M4 LINE L1 3669 3923 -2223 2294 97 3 0 chr17 18940661 18940972 -66497508 + AluSp SINE Alu 1 312 -1 2192 103 3 0 chr17 18940982 18941282 -66497198 + AluSq SINE Alu 1 301 -12 1707 307 108 73 chr17 18941282 18941686 -66496794 + L1M4 LINE L1 3931 4427 -1719 360 282 90 43 chr17 18943272 18943501 -66494979 + L1M4 LINE L1 2962 3179 -2967 2348 64 0 3 chr17 18943501 18943796 -66494684 + AluY SINE Alu 1 294 -17 360 282 90 43 chr17 18943796 18944009 -66494471 + L1M4 LINE L1 3179 3425 -2721 938 85 0 8 chr17 18944011 18944140 -66494340 + AluSq/x SINE Alu 1 128 -185 2176 116 0 0 chr17 18944140 18944450 -66494030 + AluSg SINE Alu 1 310 0 849 305 50 17 chr17 18944452 18945095 -66493385 + L1M4 LINE L1 3422 4085 -2061 205 241 0 0 chr17 18945205 18945259 -66493221 + (TAAG)n Simple_repeat Simple_repeat 1 54 0 431 274 72 20 chr17 18945259 18945412 -66493068 + L1M4 LINE L1 4211 4371 -1775 3066 183 43 13 chr17 18946809 18947433 -66491047 - L1PB4 LINE L1 0 6156 5514 854 219 6 0 chr17 18947441 18947624 -66490856 - L1PB4 LINE L1 -1089 5057 4874 605 260 52 34 chr17 18947640 18947909 -66490571 - L1MCa LINE L1 -1983 4443 4170 380 344 32 14 chr17 18948514 18948732 -66489748 + HERVL74 LTR ERVL 1835 2056 -3629 25 51 0 0 chr17 18949315 18949354 -66489126 + AT_rich Low_complexity Low_complexity 1 39 0 1204 73 0 51 chr17 18949631 18949808 -66488672 - L1PB1 LINE L1 -2 6149 5982 287 385 32 5 chr17 18950225 18950412 -66488068 + HERVL74 LTR ERVL 2580 2771 -785 870 297 99 18 chr17 18953328 18953712 -66484768 - MER57B LTR ERV1 -10 424 10 1495 241 83 36 chr17 18954469 18955328 -66483152 - L1MCa LINE L1 -3223 3203 2316 749 266 19 53 chr17 18955324 18955541 -66482939 - L1MA10 LINE L1 0 6334 6130 * 2204 100 0 3 chr17 18955541 18955840 -66482640 - AluSc SINE Alu -9 300 3 749 266 19 53 chr17 18955840 18955945 -66482535 - L1MA10 LINE L1 -204 6130 6023 261 177 63 0 chr17 18955959 18956038 -66482442 - L1MA9 LINE L1 0 6312 6229 603 268 68 27 chr17 18956076 18956337 -66482143 - L1M4c LINE L1 -3898 2486 2204 2245 106 0 0 chr17 18956337 18956640 -66481840 - AluSg1 SINE Alu -6 303 1 603 268 68 27 chr17 18956640 18956747 -66481733 - L1M4c LINE L1 -4180 2204 2103 186 143 0 0 chr17 18957318 18957353 -66481127 + (TCC)n Simple_repeat Simple_repeat 2 36 0 25 0 0 0 chr17 18958837 18958862 -66479618 + AT_rich Low_complexity Low_complexity 1 25 0 696 325 55 13 chr17 18959510 18960061 -66478419 + HERVL74 LTR ERVL 3963 4624 -1140 3418 102 13 83 chr17 18962057 18962658 -66475822 - LTR8 LTR ERV1 -1 690 132 1879 141 7 3 chr17 18962677 18962974 -66475506 + AluJb SINE Alu 5 302 -10 1811 151 3 16 chr17 18963076 18963380 -66475100 - AluSx SINE Alu -12 300 1 1332 209 18 7 chr17 18963473 18963755 -66474725 + AluJo SINE Alu 12 296 -16 505 323 19 15 chr17 18963877 18963968 -66474512 + L1ME4a LINE L1 5615 5704 -417 2042 107 33 0 chr17 18963968 18964267 -66474213 - AluSq SINE Alu -3 310 2 505 323 19 15 chr17 18964267 18964435 -66474045 + L1ME4a LINE L1 5704 5875 -246 760 220 122 16 chr17 18965448 18965703 -66472777 + MLT1C LTR MaLR 1 282 -185 235 232 150 13 chr17 18965713 18965803 -66472677 + MLT1C LTR MaLR 225 419 -47 598 130 84 97 chr17 18966684 18966838 -66471642 + FRAM SINE Alu 17 168 -8 188 255 78 0 chr17 18966844 18966895 -66471585 + MIR SINE MIR 20 74 -188 785 270 70 7 chr17 18966909 18967209 -66471271 - LTR16C LTR ERVL -18 473 155 224 233 14 41 chr17 18967343 18967416 -66471064 + MIR SINE MIR 65 135 -127 186 300 17 0 chr17 18967521 18967581 -66470899 - MIR SINE MIR -117 145 85 394 339 145 8 chr17 18967818 18968066 -66470414 - L1MC/D LINE L1 -2090 5718 5437 263 224 17 0 chr17 18969682 18969740 -66468740 - L2 LINE L2 -15 3298 3240 399 309 48 5 chr17 18969751 18969939 -66468541 - LTR16B LTR ERVL -1 463 268 260 231 154 0 chr17 18970030 18970108 -66468372 - LTR16A LTR ERVL -351 99 10 1096 143 49 90 chr17 18970233 18970478 -66468002 + AluJo SINE Alu 1 235 -77 521 238 130 61 chr17 18970513 18970744 -66467736 + MLT1J LTR MaLR 219 465 -46 2223 99 3 0 chr17 18970789 18971091 -66467389 - AluSx SINE Alu -9 303 1 1010 155 52 3 chr17 18971115 18971490 -66466990 - L1MB3 LINE L1 -28 6155 5706 576 115 0 0 chr17 18971490 18971568 -66466912 + AluSg/x SINE Alu 219 296 -16 539 130 0 104 chr17 18971568 18971683 -66466797 - L1MB3 LINE L1 -474 5709 5607 1527 190 150 34 chr17 18972279 18972632 -66465848 + MSTD LTR MaLR 3 396 0 434 262 63 0 chr17 18972857 18972983 -66465497 + MER5A DNA MER1_type 7 140 -49 1084 253 54 39 chr17 18973145 18973477 -66465003 - L1ME3 LINE L1 -25 6137 5801 266 286 41 31 chr17 18974594 18974692 -66463788 + L3b LINE CR1 1345 1443 -140 444 303 117 0 chr17 18975053 18975241 -66463239 - MIR SINE MIR -10 252 43 222 301 96 12 chr17 18975250 18975333 -66463147 - MIR SINE MIR -3 259 170 521 353 59 28 chr17 18975528 18975882 -66462598 + L1ME4a LINE L1 5533 5897 -224 342 248 29 19 chr17 18976048 18976153 -66462327 - L1MC4 LINE L1 -4 8038 7933 1811 171 10 7 chr17 18976154 18976464 -66462016 - AluSx SINE Alu -1 311 1 311 272 132 9 chr17 18977056 18977170 -66461310 + MIR SINE MIR 18 145 -117 202 286 95 0 chr17 18977282 18977345 -66461135 - L2 LINE L2 -56 3216 3148 447 263 51 40 chr17 18978057 18978232 -66460248 + MER69 DNA AcHobo 31 207 -2319 392 295 130 25 chr17 18978267 18978467 -66460013 + MER69 DNA AcHobo 317 537 -1989 300 291 119 0 chr17 18978830 18978964 -66459516 + MIR SINE MIR 13 162 -100 261 314 88 22 chr17 18979259 18979396 -66459084 - LTR16C LTR ERVL -281 210 65 1399 266 69 47 chr17 18979540 18980163 -66458317 - L1MC4a LINE L1 -1916 5892 5256 222 319 52 7 chr17 18980714 18980849 -66457631 - MIR3 SINE MIR -17 191 51 180 145 161 32 chr17 18981056 18981118 -66457362 - L2 LINE L2 -360 2953 2884 256 278 14 0 chr17 18981907 18981979 -66456501 + MIR SINE MIR 62 134 -74 388 316 15 8 chr17 18982076 18982209 -66456271 - L2 LINE L2 0 3313 3180 250 178 314 8 chr17 18982255 18982373 -66456107 - L2 LINE L2 -265 3048 2895 195 286 0 16 chr17 18982487 18982550 -66455930 - L3b LINE CR1 -200 1383 1322 262 280 227 29 chr17 18982967 18983310 -66455170 + L2 LINE L2 2553 2963 -351 531 257 66 0 chr17 18983404 18983556 -66454924 + MER3 DNA MER1_type 1 162 -47 2169 113 6 0 chr17 18983728 18984039 -66454441 + AluSp SINE Alu 1 313 0 1788 101 4 0 chr17 18984434 18984681 -66453799 - AluSx SINE Alu -12 300 53 2158 91 0 7 chr17 18985869 18986165 -66452315 - AluY SINE Alu -17 294 1 306 188 38 38 chr17 18986166 18986246 -66452234 + MER3 DNA MER1_type 125 204 -5 525 288 76 0 chr17 18986273 18986457 -66452023 + L2 LINE L2 3116 3313 0 221 240 27 40 chr17 18986507 18986582 -66451898 + MIR SINE MIR 56 129 -133 1386 47 0 134 chr17 18986650 18986882 -66451598 + LTR14A LTR ERVK 1 201 -143 2087 165 35 2 chr17 18986882 18987282 -66451198 - L1PB4 LINE L1 -205 5951 5539 23 0 0 0 chr17 18988197 18988220 -66450260 + AT_rich Low_complexity Low_complexity 1 23 0 333 301 96 7 chr17 18988247 18988383 -66450097 - MIR SINE MIR -34 228 81 216 0 0 0 chr17 18988998 18989022 -66449458 + (TCTG)n Simple_repeat Simple_repeat 3 26 0 312 292 118 21 chr17 18989353 18989497 -66448983 - MIR3 SINE MIR -7 201 44 335 383 37 10 chr17 18990532 18990934 -66447546 - L2 LINE L2 -404 2910 2498 190 286 71 24 chr17 18993173 18993257 -66445223 + MIR3 SINE MIR 100 187 -21 233 234 9 103 chr17 18999182 18999289 -66439191 + MIR SINE MIR 52 148 -60 203 326 22 56 chr17 19000573 19000662 -66437818 - MIR SINE MIR -62 146 61 347 269 108 38 chr17 19002100 19002286 -66436194 + L2 LINE L2 3103 3301 -12 443 266 65 0 chr17 19002311 19002435 -66436045 - MIR SINE MIR -43 219 88 5801 130 26 35 chr17 19003811 19004789 -66433691 + LTR5 LTR ERVK 1 969 0 301 226 28 75 chr17 19005223 19005329 -66433151 + MIR SINE MIR 44 144 -64 243 316 90 13 chr17 19005361 19005510 -66432970 + MIR SINE MIR 11 167 -72 420 268 39 0 chr17 19006029 19006156 -66432324 - MIR SINE MIR -111 151 20 350 276 118 7 chr17 19006235 19006387 -66432093 - MIR3 SINE MIR -7 201 33 215 280 0 0 chr17 19007174 19007249 -66431231 + (TGG)n Simple_repeat Simple_repeat 1 75 0 467 298 13 20 chr17 19010074 19010246 -66428234 - MIR SINE MIR -88 174 3 208 355 45 35 chr17 19010499 19010699 -66427781 + L2 LINE L2 2564 2765 -549 27 0 0 0 chr17 19010835 19010862 -66427618 + AT_rich Low_complexity Low_complexity 1 27 0 2267 88 0 10 chr17 19010888 19011184 -66427296 - AluY SINE Alu -18 293 1 3580 58 0 9 chr17 19011189 19011637 -66426843 - L1PA6 LINE L1 0 6154 5711 4285 256 101 45 chr17 19011704 19012930 -66425550 - HAL1 LINE L1 -123 2384 1228 1898 169 0 0 chr17 19012930 19013226 -66425254 + AluJb SINE Alu 1 296 -16 4285 256 101 45 chr17 19013226 19013893 -66424587 - HAL1 LINE L1 -1279 1228 353 2326 83 0 3 chr17 19013893 19014193 -66424287 - AluY SINE Alu -12 299 1 4285 256 101 45 chr17 19014193 19014460 -66424020 - HAL1 LINE L1 -2154 353 102 437 272 31 63 chr17 19016216 19016407 -66422073 - MIR SINE MIR -50 212 28 211 302 0 0 chr17 19017413 19017499 -66420981 + (TGG)n Simple_repeat Simple_repeat 2 87 0 500 312 40 13 chr17 19017902 19018052 -66420428 - MIR3 SINE MIR -42 166 33 343 308 115 45 chr17 19018565 19018735 -66419745 - MIR3 SINE MIR -20 188 8 226 319 166 47 chr17 19019067 19019236 -66419244 + MER5A DNA MER1_type 1 189 0 830 155 23 0 chr17 19019779 19019908 -66418572 + FLAM_A SINE Alu 2 133 0 241 169 153 0 chr17 19021942 19022001 -66416479 - L2 LINE L2 -1 3271 3204 265 268 28 0 chr17 19022453 19022524 -66415956 - MIR SINE MIR -28 234 162 2174 117 0 0 chr17 19022531 19022830 -66415650 - AluSx SINE Alu -13 299 1 560 290 139 57 chr17 19022876 19023242 -66415238 + L2 LINE L2 2857 3252 -20 346 269 126 8 chr17 19023255 19023374 -66415106 - MIR SINE MIR -123 139 7 2415 64 0 0 chr17 19024427 19024722 -66413758 - AluY SINE Alu -3 308 14 888 264 90 0 chr17 19025556 19025890 -66412590 + MER113 DNA MER1_type? 46 409 -112 725 129 10 0 chr17 19025891 19025992 -66412488 + AluJ/FLAM SINE Alu 1 102 -210 256 358 156 12 chr17 19026329 19026572 -66411908 + L2 LINE L2 3030 3307 -6 284 302 324 0 chr17 19026716 19026895 -66411585 + MIR SINE MIR 6 242 -20 314 248 171 0 chr17 19027311 19027416 -66411064 - L2 LINE L2 -1 3271 3149 732 220 111 89 chr17 19027516 19027976 -66410504 - MER113 DNA MER1_type? -51 470 1 520 232 93 93 chr17 19028206 19028603 -66409877 - L1ME4a LINE L1 0 6121 5725 243 0 0 0 chr17 19028649 19028676 -66409804 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 757 241 6 13 chr17 19028679 19028837 -66409643 - AluJo SINE Alu -31 281 125 383 259 86 26 chr17 19028844 19028960 -66409520 - L1ME4a LINE L1 -440 5681 5559 1851 143 0 7 chr17 19029198 19029477 -66409003 + AluSx SINE Alu 1 277 -35 276 364 93 12 chr17 19029969 19030131 -66408349 - MIR SINE MIR -75 187 13 457 265 244 17 chr17 19030719 19030957 -66407523 - L2 LINE L2 -1 3312 3021 188 266 0 62 chr17 19031050 19031114 -66407366 - MIR SINE MIR -110 152 93 311 245 192 6 chr17 19031148 19031311 -66407169 - MIR SINE MIR -53 209 16 1981 123 37 0 chr17 19031369 19031669 -66406811 - AluY SINE Alu 0 311 1 484 241 221 0 chr17 19031863 19032008 -66406472 + MER5A DNA MER1_type 13 189 0 275 275 12 12 chr17 19032366 19032446 -66406034 - L2 LINE L2 -5 3308 3229 228 195 0 0 chr17 19032590 19032631 -66405849 - L2 LINE L2 -216 3056 3016 199 262 6 6 chr17 19032685 19032853 -66405627 + (CA)n Simple_repeat Simple_repeat 1 168 0 243 250 12 6 chr17 19032880 19033040 -66405440 + (CA)n Simple_repeat Simple_repeat 1 161 0 339 332 95 43 chr17 19033838 19034049 -66404431 + MIR SINE MIR 28 249 -13 325 327 9 9 chr17 19034316 19034429 -66404051 + L2 LINE L2 2251 2363 -951 1065 229 9 0 chr17 19034456 19034670 -66403810 + MER20 DNA MER1_type 4 219 0 1697 131 6 68 chr17 19034728 19035064 -66403416 - MER1B DNA MER1_type -24 315 1 21 71 0 0 chr17 19036071 19036113 -66402367 + AT_rich Low_complexity Low_complexity 1 42 0 2081 107 0 4 chr17 19037654 19037966 -66400514 - AluSc SINE Alu 0 311 1 2244 96 0 29 chr17 19038022 19038334 -66400146 - AluSx SINE Alu -9 303 1 1561 170 52 4 chr17 19038868 19039151 -66399329 - AluJo SINE Alu -26 286 3 228 250 52 73 chr17 19040078 19040174 -66398306 - MIR SINE MIR -7 255 162 466 183 54 0 chr17 19040210 19040303 -66398177 - Charlie1 DNA MER1_type -30 2731 2634 704 212 65 54 chr17 19040317 19040456 -66398024 - Charlie1 DNA MER1_type -2544 217 73 1909 132 0 21 chr17 19040456 19040779 -66397701 + AluJb SINE Alu 1 317 0 704 212 65 54 chr17 19040779 19040822 -66397658 - Charlie1 DNA MER1_type -2688 73 32 361 306 148 27 chr17 19040863 19041046 -66397434 - MIR SINE MIR -24 238 34 397 229 0 26 chr17 19041853 19041967 -66396513 + L1ME2 LINE L1 6053 6163 -1 2178 96 0 54 chr17 19041979 19042292 -66396188 + AluY SINE Alu 1 296 -15 2229 132 0 3 chr17 19042488 19042799 -66395681 + AluSx SINE Alu 1 310 -2 1687 151 60 17 chr17 19043760 19044059 -66394421 + AluJo SINE Alu 1 312 0 1610 140 0 0 chr17 19045955 19046183 -66392297 - AluJb SINE Alu 0 312 85 814 282 91 35 chr17 19046263 19046749 -66391731 - L1ME4a LINE L1 -1 6120 5608 2157 119 8 72 chr17 19047076 19047436 -66391044 + MER1B DNA MER1_type 1 337 0 210 248 238 9 chr17 19047832 19047937 -66390543 + MIR SINE MIR 117 245 -17 2245 95 14 0 chr17 19048093 19048387 -66390093 + AluSp SINE Alu 1 298 -15 1975 146 13 16 chr17 19048511 19048819 -66389661 - AluJb SINE Alu -5 307 1 1240 167 9 32 chr17 19048852 19049068 -66389412 + AluJb SINE Alu 77 287 -25 541 276 132 63 chr17 19049532 19049851 -66388629 - MER102b DNA MER1_type 0 341 1 192 192 10 162 chr17 19050314 19050413 -66388067 - MER5A DNA MER1_type -105 84 1 2240 91 3 7 chr17 19050897 19051241 -66387239 - AluSp SINE Alu 0 343 1 1023 104 0 0 chr17 19051249 19051384 -66387096 - AluSp/q SINE Alu -22 291 157 413 143 0 0 chr17 19052692 19052748 -66385732 + AluJ/FLAM SINE Alu 2 57 -255 2432 130 29 11 chr17 19052748 19053374 -66385106 + L1P4 LINE L1 5000 5636 -529 807 206 0 0 chr17 19053375 19053545 -66384935 - L1P LINE L1 -1253 4893 4724 492 191 0 0 chr17 19053542 19053636 -66384844 + L1 LINE L1 4595 4688 -1458 * 863 205 44 44 chr17 19053636 19053841 -66384639 + Tigger2 DNA MER2_type 2511 2715 -3 2112 246 101 113 chr17 19053842 19055399 -66383081 + L1MC4a LINE L1 6515 7995 0 777 126 42 48 chr17 19055489 19055656 -66382824 + L1MC4 LINE L1 7242 7407 -635 10100 224 18 20 chr17 19055669 19058396 -66380084 + L1PA11 LINE L1 1122 4652 -2932 14433 180 17 18 chr17 19058401 19060132 -66378348 - L1PB1 LINE L1 -2 6865 5133 180 0 0 0 chr17 19060132 19060152 -66378328 + (TTA)n Simple_repeat Simple_repeat 2 21 0 14433 180 17 18 chr17 19060152 19060937 -66377543 - L1PB1 LINE L1 -1734 5133 4348 2272 153 22 30 chr17 19060937 19061304 -66377176 - THE1B LTR MaLR 0 364 1 14433 180 17 18 chr17 19061304 19062865 -66375615 - L1PB1 LINE L1 -2519 4348 2801 8319 149 17 15 chr17 19062866 19064987 -66373493 + L1PA11 LINE L1 5484 7611 -1 1404 235 119 9 chr17 19065006 19065435 -66373045 + L1MC4 LINE L1 7417 7892 -150 1547 201 7 3 chr17 19066198 19066506 -66371974 - AluJb SINE Alu 0 309 1 255 285 124 73 chr17 19066710 19067209 -66371271 - L2 LINE L2 0 3272 2745 327 274 53 26 chr17 19069031 19069144 -66369336 - MIR3 SINE MIR -48 160 45 2426 90 0 0 chr17 19069224 19069535 -66368945 + AluY SINE Alu 1 311 0 2245 120 0 0 chr17 19069549 19069857 -66368623 + AluSg SINE Alu 3 310 0 5091 75 29 15 chr17 19071149 19071800 -66366680 + PABL_A LTR ERV1 1 660 0 2350 103 0 0 chr17 19072358 19072660 -66365820 - AluSx SINE Alu -9 303 2 2190 110 6 31 chr17 19072897 19073214 -66365266 - AluSx SINE Alu -3 309 1 615 124 21 10 chr17 19073286 19073383 -66365097 + MER4A LTR ERV1 1 98 -566 1859 131 3 82 chr17 19073383 19073758 -66364722 + MER4A LTR ERV1 261 664 0 946 196 0 46 chr17 19074253 19074426 -66364054 - FAM SINE Alu -9 166 2 554 184 9 0 chr17 19076065 19076174 -66362306 + L1MA9 LINE L1 6164 6273 -39 2153 78 19 42 chr17 19078326 19078634 -66359846 - AluY SINE Alu -10 301 1 1200 283 142 20 chr17 19079383 19079876 -66358604 + MLT1G1 LTR MaLR 2 595 0 357 250 0 25 chr17 19080252 19080332 -66358148 + Tigger5 DNA MER2_type 2 79 -2244 251 282 0 14 chr17 19080350 19080421 -66358059 - Tigger5 DNA MER2_type -5 2318 2249 869 235 5 0 chr17 19081579 19081789 -66356691 + L1MA5 LINE L1 13 581 -6628 6661 234 84 27 chr17 19081881 19083818 -66354662 + L1MA5 LINE L1 841 2667 -4541 1935 162 0 13 chr17 19083818 19084133 -66354347 + AluSx SINE Alu 1 311 -1 6661 234 84 27 chr17 19084133 19084658 -66353822 + L1MA5 LINE L1 2667 3161 -4047 182 37 37 0 chr17 19084658 19084685 -66353795 + (TAAAA)n Simple_repeat Simple_repeat 3 30 0 6661 234 84 27 chr17 19084685 19085920 -66352560 + L1MA5 LINE L1 3161 4809 -2399 1667 175 29 79 chr17 19085911 19086390 -66352090 + L1MA5 LINE L1 5218 5672 -1536 * 1026 346 33 23 chr17 19086411 19086986 -66351494 + L1PA16 LINE L1 1 581 -6206 280 329 6 49 chr17 19087023 19087187 -66351293 + L1PA16 LINE L1 1363 1519 -5268 2385 130 0 12 chr17 19087286 19087624 -66350856 - MER1B DNA MER1_type 0 337 4 9932 240 45 48 chr17 19088363 19090674 -66347806 + L1PA16 LINE L1 1495 3812 -2985 294 29 0 0 chr17 19090674 19090709 -66347771 + (TAAA)n Simple_repeat Simple_repeat 1 35 0 9932 240 45 48 chr17 19090709 19091498 -66346982 + L1PA16 LINE L1 3812 4602 -2195 712 188 0 40 chr17 19091498 19091647 -66346833 + FLAM_C SINE Alu 1 143 0 9932 240 45 48 chr17 19091647 19092768 -66345712 + L1PA16 LINE L1 4602 5799 -998 196 54 0 89 chr17 19092771 19092827 -66345653 + (GGGA)n Simple_repeat Simple_repeat 1 51 0 210 176 0 59 chr17 19093291 19093342 -66345138 + GA-rich Low_complexity Low_complexity 2 49 0 195 186 0 0 chr17 19093371 19093414 -66345066 + A-rich Low_complexity Low_complexity 1 43 0 4924 152 22 29 chr17 19094967 19096002 -66342478 + L1PA16 LINE L1 5792 6816 -1 3865 166 29 46 chr17 19096044 19097577 -66340903 + L1MA5 LINE L1 5662 7166 -196 1167 122 0 6 chr17 19097580 19097744 -66340736 - AluSg/x SINE Alu -14 296 134 914 140 12 7 chr17 19097754 19097929 -66340551 + L1MA5 LINE L1 7180 7360 -7 606 242 0 0 chr17 19097939 19098063 -66340417 + FLAM_A SINE Alu 1 124 -18 919 255 101 25 chr17 19098106 19098533 -66339947 + MLT1G1 LTR MaLR 45 593 -2 1198 208 143 5 chr17 19099898 19100277 -66338203 + L1MB8 LINE L1 4771 5201 -945 851 142 8 0 chr17 19100279 19100399 -66338081 + FLAM_C SINE Alu 1 121 -22 28 29 0 0 chr17 19100399 19100434 -66338046 + AT_rich Low_complexity Low_complexity 1 35 0 3685 166 24 17 chr17 19100441 19101363 -66337117 + L1MB8 LINE L1 5188 6177 -1 27 62 0 0 chr17 19101864 19101912 -66336568 + AT_rich Low_complexity Low_complexity 1 48 0 2850 0 0 0 chr17 19102219 19102523 -66335957 + AluYa5 SINE Alu 1 304 -7 405 320 59 0 chr17 19102857 19103010 -66335470 + L2 LINE L2 2722 2883 -431 1093 81 0 0 chr17 19103274 19103410 -66335070 + AluSq/x SINE Alu 1 136 -176 198 0 0 0 chr17 19103429 19103451 -66335029 + (A)n Simple_repeat Simple_repeat 1 22 0 1901 149 3 13 chr17 19105528 19105830 -66332650 - AluJb SINE Alu -13 299 1 2014 81 0 11 chr17 19106155 19106427 -66332053 - AluY SINE Alu -3 308 40 261 0 0 0 chr17 19106890 19106919 -66331561 + (TG)n Simple_repeat Simple_repeat 2 30 0 3683 194 68 4 chr17 19108672 19108922 -66329558 + L1PB3 LINE L1 4109 4341 -1805 207 114 0 0 chr17 19108922 19108957 -66329523 + (CAA)n Simple_repeat Simple_repeat 3 37 0 3683 194 68 4 chr17 19108957 19109546 -66328934 + L1PB3 LINE L1 4341 5002 -1144 853 144 0 0 chr17 19109556 19109681 -66328799 + FLAM_C SINE Alu 12 136 -7 387 0 0 0 chr17 19109699 19109742 -66328738 + (TA)n Simple_repeat Simple_repeat 1 43 0 574 125 0 11 chr17 19109743 19109831 -66328649 + L1PB3 LINE L1 6025 6111 -43 455 71 0 0 chr17 19109837 19109893 -66328587 - Alu SINE Alu -19 292 237 1692 113 13 0 chr17 19109893 19110152 -66328328 + AluSp SINE Alu 42 303 0 5635 114 20 10 chr17 19110152 19111118 -66327362 + L1PB3 LINE L1 5162 6154 0 1061 226 63 19 chr17 19111365 19111635 -66326845 + AluJo SINE Alu 1 282 -30 479 292 187 30 chr17 19112260 19112592 -66325888 - L2 LINE L2 -1 3312 2929 1673 295 69 15 chr17 19112598 19113263 -66325217 + L1ME LINE L1 40 740 -5656 2550 48 0 10 chr17 19113294 19113608 -66324872 - AluY SINE Alu 0 311 1 227 233 28 72 chr17 19113635 19113815 -66324665 + L1ME LINE L1 1028 1199 -5197 1386 257 41 38 chr17 19113874 19113926 -66324554 + L1ME LINE L1 1944 1994 -4221 1741 120 0 4 chr17 19113926 19114193 -66324287 - L1PB1 LINE L1 -7 6144 5879 1386 257 41 38 chr17 19114193 19114704 -66323776 + L1ME LINE L1 1994 2469 -3746 1069 76 0 0 chr17 19114752 19114884 -66323596 + AluY SINE Alu 1 132 -179 306 0 0 0 chr17 19114884 19114918 -66323562 + (A)n Simple_repeat Simple_repeat 1 34 0 3634 220 96 81 chr17 19114938 19115175 -66323305 + L1ME LINE L1 2507 2739 -3476 2173 51 98 0 chr17 19115175 19115450 -66323030 - AluY SINE Alu -9 302 1 3634 220 96 81 chr17 19115450 19115864 -66322616 + L1ME LINE L1 2739 3145 -3070 1822 179 43 6 chr17 19115864 19116216 -66322264 + MLT1A1 LTR MaLR 1 365 0 3634 220 96 81 chr17 19116216 19116845 -66321635 + L1ME LINE L1 3145 3824 -2391 2641 168 14 14 chr17 19116845 19117357 -66321123 + L1MC1 LINE L1 5821 6332 -1 3634 220 96 81 chr17 19117357 19117834 -66320646 + L1ME LINE L1 3824 4292 -1923 709 260 68 0 chr17 19117834 19118011 -66320469 + MER58A DNA MER1_type 2 190 -34 911 214 8 41 chr17 19118135 19118378 -66320102 + L1ME LINE L1 5430 5664 -571 387 248 149 14 chr17 19118379 19118520 -66319960 + L1MA10 LINE L1 6166 6325 -9 233 313 53 91 chr17 19118599 19118807 -66319673 - L2 LINE L2 -529 2785 2586 711 264 32 37 chr17 19119973 19120189 -66318291 - MIR SINE MIR -25 237 23 214 189 0 0 chr17 19120404 19120441 -66318039 + (TTCA)n Simple_repeat Simple_repeat 1 37 0 21 0 0 0 chr17 19120548 19120569 -66317911 + AT_rich Low_complexity Low_complexity 1 21 0 2416 100 0 0 chr17 19120576 19120886 -66317594 + AluSg SINE Alu 1 310 0 420 287 179 31 chr17 19121352 19121575 -66316905 + L2 LINE L2 1652 1907 -1407 2320 86 16 0 chr17 19122319 19122623 -66315857 + AluSc SINE Alu 1 309 0 2375 45 42 0 chr17 19122629 19122918 -66315562 + AluY SINE Alu 1 301 -10 200 35 35 0 chr17 19123480 19123509 -66314971 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 198 103 0 0 chr17 19124391 19124420 -66314060 + (T)n Simple_repeat Simple_repeat 1 29 0 2811 274 135 45 chr17 19124476 19125869 -66312611 - L2 LINE L2 -6 3307 1778 356 315 11 0 chr17 19126440 19126529 -66311951 + MER58A DNA MER1_type 1 90 -17 302 261 0 0 chr17 19126535 19126600 -66311880 + MER58A DNA MER1_type 160 224 0 322 202 61 53 chr17 19127030 19127144 -66311336 - L1MCa LINE L1 -4320 2106 1992 500 281 94 49 chr17 19127160 19127488 -66310992 - L1MC/D LINE L1 -2079 5729 5387 2167 132 6 0 chr17 19127570 19127881 -66310599 - AluSp SINE Alu 0 313 1 27 0 0 0 chr17 19128220 19128247 -66310233 + AT_rich Low_complexity Low_complexity 1 27 0 261 0 0 0 chr17 19128573 19128602 -66309878 + (T)n Simple_repeat Simple_repeat 1 29 0 2154 140 0 12 chr17 19129359 19129681 -66308799 - 7SLRNA srpRNA srpRNA 0 320 3 21 36 0 0 chr17 19132045 19132073 -66306407 + AT_rich Low_complexity Low_complexity 1 28 0 28 29 0 0 chr17 19132770 19132805 -66305675 + AT_rich Low_complexity Low_complexity 1 35 0 224 200 22 0 chr17 19133020 19133065 -66305415 - L2 LINE L2 -5 3308 3263 2055 110 0 21 chr17 19133638 19133929 -66304551 - AluSg SINE Alu -10 300 16 23 54 0 0 chr17 19134990 19135027 -66303453 + AT_rich Low_complexity Low_complexity 1 37 0 2495 53 0 7 chr17 19135268 19135570 -66302910 - AluY SINE Alu -11 300 1 631 234 126 0 chr17 19135699 19135866 -66302614 + Charlie1 DNA MER1_type 12 199 -2562 2412 65 3 0 chr17 19135913 19136219 -66302261 - AluY SINE Alu -4 307 1 376 221 0 0 chr17 19136228 19136323 -66302157 + Charlie1 DNA MER1_type 2622 2716 -45 22 0 0 0 chr17 19136324 19136346 -66302134 + AT_rich Low_complexity Low_complexity 1 22 0 597 161 0 0 chr17 19137060 19137153 -66301327 + Tigger7 DNA MER2_type 2399 2491 0 2070 169 19 19 chr17 19138136 19138550 -66299930 + L1MC1 LINE L1 5906 6319 -14 336 180 34 22 chr17 19138477 19138566 -66299914 + L1MC3 LINE L1 7694 7783 -2 23 0 0 0 chr17 19139076 19139099 -66299381 + AT_rich Low_complexity Low_complexity 1 23 0 2743 172 17 50 chr17 19139134 19139715 -66298765 + MER68 LTR ERV1 1 562 0 530 259 9 0 chr17 19140076 19140184 -66298296 + FAM SINE Alu 1 109 -76 2447 61 0 13 chr17 19140200 19140510 -66297970 + AluY SINE Alu 1 306 -5 681 264 155 0 chr17 19142434 19142627 -66295853 + MER58A DNA MER1_type 2 224 0 668 308 125 9 chr17 19142700 19143028 -66295452 + MLT1L LTR MaLR 5 370 -245 283 261 0 0 chr17 19143099 19143164 -66295316 + MLT1L LTR MaLR 546 610 -5 2228 112 3 19 chr17 19143211 19143525 -66294955 - AluSc SINE Alu 0 309 1 2063 128 3 0 chr17 19143561 19143850 -66294630 + AluSx SINE Alu 1 290 -22 1797 160 3 39 chr17 19144256 19144568 -66293912 - AluJo SINE Alu -11 301 1 1640 176 33 10 chr17 19145274 19145575 -66292905 - AluJo SINE Alu -4 308 1 2305 167 21 28 chr17 19145684 19146120 -66292360 + Tigger2a DNA MER2_type 2 434 0 21 0 0 0 chr17 19146150 19146171 -66292309 + AT_rich Low_complexity Low_complexity 1 21 0 2480 47 10 0 chr17 19146260 19146557 -66291923 + AluY SINE Alu 1 300 -11 553 146 0 64 chr17 19147969 19148079 -66290401 - U6 snRNA snRNA -1 106 4 2198 74 0 14 chr17 19148080 19148396 -66290084 - AluY SINE Alu 0 312 1 905 80 0 0 chr17 19148695 19148808 -66289672 - AluSg SINE Alu -197 113 1 2331 97 7 0 chr17 19150382 19150681 -66287799 + AluSx SINE Alu 1 301 -11 344 132 29 0 chr17 19150681 19150749 -66287731 + GA-rich Low_complexity Low_complexity 1 70 0 1465 145 16 21 chr17 19150831 19151073 -66287407 - LOR1b LTR ERV1 0 461 221 2334 110 0 3 chr17 19151088 19151398 -66287082 + AluSc SINE Alu 1 309 0 21 71 0 0 chr17 19151776 19151818 -66286662 + AT_rich Low_complexity Low_complexity 1 42 0 435 19 0 0 chr17 19153090 19153142 -66285338 + (TG)n Simple_repeat Simple_repeat 1 52 0 470 161 62 0 chr17 19153145 19153226 -66285254 + AluSg/x SINE Alu 208 293 -17 887 139 0 8 chr17 19153226 19153355 -66285125 - AluJo/FLAM SINE Alu -184 128 1 570 89 0 11 chr17 19153706 19153796 -66284684 + Alu SINE Alu 222 310 0 2006 139 0 31 chr17 19153797 19154120 -66284360 + AluSq SINE Alu 1 313 0 447 211 0 98 chr17 19154153 19154218 -66284262 + L1M4 LINE L1 4063 4112 -2034 2040 102 7 17 chr17 19154218 19154511 -66283969 + AluSx SINE Alu 23 312 0 447 211 0 98 chr17 19154511 19154568 -66283912 + L1M4 LINE L1 4112 4173 -1973 1446 174 55 4 chr17 19154575 19154823 -66283657 + AluSx SINE Alu 24 285 -23 207 0 0 0 chr17 19154823 19154846 -66283634 + (CAAAC)n Simple_repeat Simple_repeat 2 24 0 1675 190 10 0 chr17 19154901 19155196 -66283284 - AluJb SINE Alu -14 298 1 2068 112 3 30 chr17 19155201 19155505 -66282975 - AluSg SINE Alu -14 296 1 1213 157 164 0 chr17 19156559 19156852 -66281628 - L1MA8 LINE L1 -4 6287 5947 944 101 0 0 chr17 19156860 19156989 -66281491 + AluSg/x SINE Alu 182 310 0 464 233 35 47 chr17 19157035 19157207 -66281273 + L2 LINE L2 1841 2010 -1304 1389 206 4 7 chr17 19157335 19157607 -66280873 - MLT1A1 LTR MaLR -94 271 1 1430 230 143 65 chr17 19157612 19158021 -66280459 - L1M4 LINE L1 -3013 3133 2650 2205 55 98 0 chr17 19158021 19158296 -66280184 + AluY SINE Alu 1 302 -9 1430 230 143 65 chr17 19158296 19158559 -66279921 - L1M4 LINE L1 -3496 2650 2409 234 0 0 0 chr17 19158559 19158585 -66279895 + (T)n Simple_repeat Simple_repeat 1 26 0 578 208 0 15 chr17 19158585 19158715 -66279765 - AluY SINE Alu -179 132 5 252 0 0 0 chr17 19158771 19158799 -66279681 + (T)n Simple_repeat Simple_repeat 1 28 0 265 270 117 29 chr17 19210654 19210961 -66227519 - L1M4 LINE L1 -816 5330 4997 525 274 58 90 chr17 19211013 19211664 -66226816 + L1ME4a LINE L1 5379 6025 -96 324 251 64 106 chr17 19211692 19211927 -66226553 + L1ME4a LINE L1 5895 6119 -2 231 278 0 0 chr17 19211945 19211999 -66226481 - L2 LINE L2 -18 3295 3242 1065 238 94 18 chr17 19213031 19213601 -66224879 - L1M3 LINE L1 -736 5444 4827 405 275 41 45 chr17 19213655 19213670 -66224810 - L1M3 LINE L1 -1411 4735 4721 2514 138 65 14 chr17 19213670 19214083 -66224397 - Tigger2a DNA MER2_type 0 434 1 405 275 41 45 chr17 19214083 19214311 -66224169 - L1M3 LINE L1 -1425 4721 4493 1232 124 142 31 chr17 19214334 19214559 -66223921 - AluSx SINE Alu -10 302 53 207 0 0 0 chr17 19216094 19216117 -66222363 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1090 229 155 28 chr17 19216551 19216669 -66221811 - L1M3 LINE L1 -1703 4443 4341 411 21 0 0 chr17 19216669 19216717 -66221763 + (TA)n Simple_repeat Simple_repeat 2 49 0 1090 229 155 28 chr17 19216717 19217134 -66221346 - L1M3 LINE L1 -1805 4341 3840 1604 121 78 53 chr17 19217146 19217271 -66221209 - L1MB3 LINE L1 -7 6176 6056 2407 71 0 0 chr17 19217271 19217568 -66220912 + AluY SINE Alu 1 297 -14 1604 121 78 53 chr17 19217568 19217764 -66220716 - L1MB3 LINE L1 -127 6056 5847 763 284 91 54 chr17 19217769 19218625 -66219855 - L1M3 LINE L1 -2299 3847 2960 2971 230 59 21 chr17 19218629 19219288 -66219192 - L1ME1 LINE L1 -5 6161 5447 2123 107 0 23 chr17 19219288 19219598 -66218882 - AluSc SINE Alu -6 303 1 2971 230 59 21 chr17 19219598 19220085 -66218395 - L1ME1 LINE L1 -719 5447 4980 1019 227 36 73 chr17 19220097 19220268 -66218212 - L1M3 LINE L1 -3186 2960 2784 1989 136 0 11 chr17 19220268 19220609 -66217871 - AluSx SINE Alu 0 338 1 1019 227 36 73 chr17 19220609 19220820 -66217660 - L1M3 LINE L1 -3362 2784 2591 1985 121 21 3 chr17 19220820 19221109 -66217371 - AluY SINE Alu -17 294 1 684 121 64 70 chr17 19221111 19221232 -66217248 + Charlie1 DNA MER1_type 2600 2721 -40 2413 79 7 7 chr17 19221232 19221536 -66216944 + AluSp SINE Alu 1 304 -9 684 121 64 70 chr17 19221536 19221571 -66216909 + Charlie1 DNA MER1_type 2721 2755 -6 852 291 120 48 chr17 19221591 19222000 -66216480 - L1MEc LINE L1 -4347 2049 1671 2514 54 0 16 chr17 19222000 19222316 -66216164 - AluY SINE Alu 0 311 1 852 291 120 48 chr17 19222316 19223019 -66215461 - L1MEc LINE L1 -4725 1671 856 383 161 0 0 chr17 19223164 19223220 -66215260 + Tigger5 DNA MER2_type 1 56 -2267 428 212 59 0 chr17 19223225 19223310 -66215170 + Tigger5 DNA MER2_type 2234 2323 0 1160 259 150 13 chr17 19224059 19224438 -66214042 + LTR16A LTR ERVL 15 445 -5 403 282 117 29 chr17 19224500 19224706 -66213774 - L1ME LINE L1 -379 5742 5519 328 238 119 19 chr17 19226713 19226873 -66211607 + L1ME4a LINE L1 5709 5884 -237 257 191 0 107 chr17 19226901 19226985 -66211495 - L1MC/D LINE L1 -601 5758 5684 * 5781 138 52 13 chr17 19226978 19228892 -66209588 + L1MA8 LINE L1 4120 6176 -115 2436 84 0 0 chr17 19228892 19229189 -66209291 + AluSp SINE Alu 1 297 -16 5781 138 52 13 chr17 19229189 19229305 -66209175 + L1MA8 LINE L1 6176 6286 -5 894 143 11 53 chr17 19229342 19229544 -66208936 + L1MB3 LINE L1 5293 5490 -690 * 2735 108 5 0 chr17 19229542 19229929 -66208551 - L1PB3 LINE L1 -326 5828 5440 3326 159 12 2 chr17 19229946 19230506 -66207974 + L1MB3 LINE L1 5573 6138 -45 1983 153 17 11 chr17 19230523 19230876 -66207604 - L1MC1 LINE L1 -190 6143 5789 2040 154 102 0 chr17 19233038 19233401 -66205079 - MSTC LTR MaLR 0 428 29 2135 74 49 7 chr17 19233543 19233828 -66204652 + AluSg SINE Alu 1 297 -13 1535 154 122 0 chr17 19233878 19234164 -66204316 - MSTB1 LTR MaLR -13 419 99 708 180 43 7 chr17 19235819 19235958 -66202522 + MSTD LTR MaLR 4 147 -249 1934 130 28 87 chr17 19235985 19236228 -66202252 - L1MB5 LINE L1 -17 6157 5944 2388 88 0 3 chr17 19236228 19236536 -66201944 - AluSc SINE Alu -2 307 1 1934 130 28 87 chr17 19236536 19236684 -66201796 - L1MB5 LINE L1 -230 5944 5789 316 231 20 68 chr17 19236686 19236752 -66201728 - L1M4 LINE L1 -850 5296 5228 1597 183 111 63 chr17 19236752 19236792 -66201688 + MSTD LTR MaLR 1 38 -358 2174 100 0 7 chr17 19236792 19237098 -66201382 - AluSg SINE Alu 0 304 1 1597 183 111 63 chr17 19237098 19237434 -66201046 + MSTD LTR MaLR 38 396 0 316 231 20 68 chr17 19237434 19237514 -66200966 - L1M4 LINE L1 -918 5228 5157 1297 132 0 44 chr17 19237520 19237724 -66200756 - AluSg/x SINE Alu -17 295 101 5910 226 38 78 chr17 19237761 19238154 -66200326 - L1M4 LINE L1 -985 5161 4754 4687 136 32 73 chr17 19238154 19239085 -66199395 - L1MA4 LINE L1 0 6300 5408 5910 226 38 78 chr17 19239085 19239212 -66199268 - L1M4 LINE L1 -1392 4754 4623 1549 181 3 66 chr17 19239212 19239532 -66198948 - AluJo SINE Alu -7 305 6 5910 226 38 78 chr17 19239532 19239785 -66198695 - L1M4 LINE L1 -1523 4623 4361 1738 156 3 7 chr17 19239785 19240111 -66198369 - AluJb SINE Alu 0 327 3 5910 226 38 78 chr17 19240111 19241068 -66197412 - L1M4 LINE L1 -1785 4361 3367 2429 90 0 0 chr17 19241068 19241368 -66197112 + AluSg SINE Alu 1 300 -10 5910 226 38 78 chr17 19241368 19241437 -66197043 - L1M4 LINE L1 -2779 3367 3297 1908 84 0 24 chr17 19241437 19241688 -66196792 + AluSc SINE Alu 39 283 -26 5910 226 38 78 chr17 19241688 19242054 -66196426 - L1M4 LINE L1 -2849 3297 3129 2146 161 66 21 chr17 19242054 19242433 -66196047 - MSTD LTR MaLR 0 396 1 5910 226 38 78 chr17 19242433 19242889 -66195591 - L1M4 LINE L1 -3017 3129 2656 1018 98 0 0 chr17 19242936 19243069 -66195411 + AluSq/x SINE Alu 1 133 -180 1459 97 14 5 chr17 19243728 19243935 -66194545 + AluSc SINE Alu 86 294 -15 222 118 0 0 chr17 19244638 19244672 -66193808 + (A)n Simple_repeat Simple_repeat 1 34 0 222 306 20 51 chr17 19245569 19245667 -66192813 - L2 LINE L2 -897 2417 2323 2067 143 3 0 chr17 19245975 19246276 -66192204 - AluSx SINE Alu -9 303 2 314 248 168 29 chr17 19246696 19246833 -66191647 - L1ME LINE L1 -5580 490 335 28 61 0 0 chr17 19247014 19247063 -66191417 + AT_rich Low_complexity Low_complexity 1 49 0 2484 70 0 3 chr17 19247151 19247453 -66191027 + AluSg SINE Alu 2 302 -8 721 126 47 0 chr17 19247779 19247906 -66190574 - FLAM_C SINE Alu 0 133 1 738 266 43 3 chr17 19248347 19248629 -66189851 - L1 LINE L1 -2746 3400 3108 2275 77 7 3 chr17 19248847 19249145 -66189335 - AluSq SINE Alu -13 300 2 392 271 42 17 chr17 19249284 19249402 -66189078 + MIR SINE MIR 19 139 -123 1293 218 61 58 chr17 19249664 19250027 -66188453 - MLT1A1 LTR MaLR 0 365 2 2215 100 13 0 chr17 19250347 19250646 -66187834 - AluSc SINE Alu -6 303 1 267 103 0 0 chr17 19250927 19250966 -66187514 + (CA)n Simple_repeat Simple_repeat 2 40 0 581 266 63 36 chr17 19250970 19251304 -66187176 - L1MC4 LINE L1 -139 7903 7561 318 301 44 0 chr17 19251393 19251506 -66186974 - L1MC4 LINE L1 -529 7513 7396 1940 155 100 50 chr17 19251509 19251681 -66186799 + MSTB1 LTR MaLR 1 163 -269 2462 35 0 3 chr17 19251681 19252021 -66186459 - AluY SINE Alu 0 339 1 1940 155 100 50 chr17 19252021 19252246 -66186234 + MSTB1 LTR MaLR 163 419 -13 578 283 30 34 chr17 19252250 19252487 -66185993 - L1MC4a LINE L1 -491 7317 7082 6288 141 8 15 chr17 19252617 19253437 -66185043 + L1MA7 LINE L1 4959 5764 -527 2253 101 10 0 chr17 19253437 19253734 -66184746 + AluSc SINE Alu 1 300 -9 6288 141 8 15 chr17 19253734 19254259 -66184221 + L1MA7 LINE L1 5764 6291 0 2617 312 80 34 chr17 19254476 19254905 -66183575 - HERVL LTR ERVL -1252 4402 3994 1986 157 105 14 chr17 19254905 19255268 -66183212 + MSTD LTR MaLR 1 396 0 2617 312 80 34 chr17 19255268 19255721 -66182759 - HERVL LTR ERVL -1660 3994 3563 2487 152 55 123 chr17 19255721 19256061 -66182419 + MER74A LTR ERVL 1 284 -274 2320 95 0 3 chr17 19256061 19256357 -66182123 + AluSg SINE Alu 1 295 -15 2487 152 55 123 chr17 19256357 19256615 -66181865 + MER74A LTR ERVL 284 558 0 2617 312 80 34 chr17 19256615 19257132 -66181348 - HERVL LTR ERVL -2091 3563 2920 2200 108 3 7 chr17 19257132 19257428 -66181052 + AluSg SINE Alu 1 295 -15 2617 312 80 34 chr17 19257428 19257602 -66180878 - HERVL LTR ERVL -2734 2920 2755 1805 265 76 38 chr17 19257706 19258162 -66180318 - HERVL LTR ERVL -2565 2431 1941 2463 72 0 3 chr17 19258162 19258466 -66180014 - AluY SINE Alu -8 303 1 1805 265 76 38 chr17 19258466 19258665 -66179815 - HERVL LTR ERVL -3055 1941 1751 1890 304 67 47 chr17 19258746 19259306 -66179174 - HERVL LTR ERVL -3420 1576 1029 2383 99 0 3 chr17 19259306 19259620 -66178860 - AluSq SINE Alu 0 313 1 1890 304 67 47 chr17 19259620 19260145 -66178335 - HERVL LTR ERVL -3967 1029 469 688 286 19 66 chr17 19260236 19260508 -66177972 - HERVL LTR ERVL -4693 303 47 2067 109 0 7 chr17 19260508 19260793 -66177687 + AluSx SINE Alu 13 295 -17 688 286 19 66 chr17 19260793 19260838 -66177642 - HERVL LTR ERVL -4949 47 1 940 342 23 12 chr17 19260838 19261265 -66177215 - LTR16A LTR ERVL 0 450 19 346 265 113 55 chr17 19261290 19261485 -66176995 - L1M4 LINE L1 -3600 2546 2364 1330 233 51 36 chr17 19261485 19261876 -66176604 - MLT2C1 LTR ERVL 0 397 1 2324 84 0 32 chr17 19261885 19262196 -66176284 - AluSx SINE Alu -11 301 1 346 265 113 55 chr17 19262196 19262228 -66176252 - L1M4 LINE L1 -3789 2357 2295 1595 261 102 6 chr17 19262281 19262752 -66175728 + MLT1G LTR MaLR 75 590 0 938 81 0 0 chr17 19262878 19263001 -66175479 + AluSg/x SINE Alu 188 310 -2 444 266 146 26 chr17 19266358 19266591 -66171889 + MIR SINE MIR 2 262 0 2094 122 0 0 chr17 19266664 19266952 -66171528 - AluSx SINE Alu -24 288 1 228 143 0 0 chr17 19267196 19267238 -66171242 + (TA)n Simple_repeat Simple_repeat 1 42 0 889 129 8 8 chr17 19267460 19267584 -66170896 - FLAM_C SINE Alu -9 124 1 453 109 0 6 chr17 19267637 19267885 -66170595 + AluSx SINE Alu 1 305 -6 1659 191 3 7 chr17 19268155 19268438 -66170042 + AluJo SINE Alu 1 282 -30 230 217 0 0 chr17 19268502 19268548 -66169932 + Alu SINE Alu 82 127 -175 228 337 35 23 chr17 19268656 19268742 -66169738 + L3 LINE CR1 1484 1570 -7 28 102 0 0 chr17 19269940 19270038 -66168442 + AT_rich Low_complexity Low_complexity 1 98 0 538 234 113 11 chr17 19270283 19270465 -66168015 - L1ME3A LINE L1 -223 5947 5741 2620 243 141 74 chr17 19270500 19271319 -66167161 - L1MC4 LINE L1 -2 8040 7277 2239 105 7 0 chr17 19271319 19271623 -66166857 - AluSq SINE Alu -7 306 1 2620 243 141 74 chr17 19271623 19271635 -66166845 - L1MC4 LINE L1 -765 7277 7267 2368 97 0 0 chr17 19271635 19271935 -66166545 - AluYa5 SINE Alu -11 300 1 2620 243 141 74 chr17 19271935 19272009 -66166471 - L1MC4 LINE L1 -775 7267 7199 2338 92 0 0 chr17 19272009 19272302 -66166178 + AluSg SINE Alu 1 293 -17 2620 243 141 74 chr17 19272302 19272323 -66166157 - L1MC4 LINE L1 -843 7199 7181 207 0 0 0 chr17 19272323 19272346 -66166134 + (TA)n Simple_repeat Simple_repeat 2 24 0 2620 243 141 74 chr17 19272346 19272395 -66166085 - L1MC4 LINE L1 -861 7181 7137 2157 121 0 30 chr17 19272395 19272700 -66165780 + AluSx SINE Alu 1 296 -16 2620 243 141 74 chr17 19272700 19273052 -66165428 - L1MC4 LINE L1 -905 7137 6810 324 0 0 0 chr17 19273052 19273088 -66165392 + (TG)n Simple_repeat Simple_repeat 2 37 0 2620 243 141 74 chr17 19273088 19273345 -66165135 - L1MC4 LINE L1 -1232 6810 6345 619 220 245 17 chr17 19273391 19273632 -66164848 - L1MC4a LINE L1 -1634 6174 5879 260 0 57 0 chr17 19273640 19273675 -66164805 + (TTTTA)n Simple_repeat Simple_repeat 4 40 0 1761 166 14 0 chr17 19273682 19273960 -66164520 - AluJo SINE Alu -28 284 3 1608 168 27 27 chr17 19274061 19274358 -66164122 + AluJb SINE Alu 1 297 -15 493 280 100 87 chr17 19274616 19275087 -66163393 - L1MEd LINE L1 -5531 588 112 249 309 49 25 chr17 19275277 19275358 -66163122 + L2 LINE L2 3002 3084 -188 2429 75 7 0 chr17 19275515 19275809 -66162671 + AluSp SINE Alu 1 296 -17 23 97 0 0 chr17 19276064 19276136 -66162344 + AT_rich Low_complexity Low_complexity 1 72 0 270 73 0 0 chr17 19276468 19276509 -66161971 + (TG)n Simple_repeat Simple_repeat 2 42 0 360 0 0 0 chr17 19277019 19277059 -66161421 + (TG)n Simple_repeat Simple_repeat 2 41 0 830 226 139 62 chr17 19277270 19277593 -66160887 + MER7A DNA MER2_type 1 346 0 423 158 12 37 chr17 19277635 19277717 -66160763 + MER116 DNA Mariner 1 80 0 1971 153 0 3 chr17 19277723 19278024 -66160456 - AluSx SINE Alu -12 300 1 1730 137 107 0 chr17 19278187 19278458 -66160022 + AluSx SINE Alu 1 300 -12 600 251 89 34 chr17 19278587 19278766 -66159714 - MER5A DNA MER1_type 0 189 1 23 0 0 0 chr17 19279208 19279231 -66159249 + AT_rich Low_complexity Low_complexity 1 23 0 1234 199 34 21 chr17 19281091 19281327 -66157153 + MER8 DNA MER2_type 1 239 0 206 259 164 43 chr17 19282575 19282691 -66155789 + L2 LINE L2 3184 3313 0 1526 236 157 108 chr17 19283492 19283846 -66154634 - L1MC4 LINE L1 0 8042 7707 2329 74 0 10 chr17 19283846 19284143 -66154337 - AluY SINE Alu -15 296 3 1526 236 157 108 chr17 19284143 19285034 -66153446 - L1MC4 LINE L1 -335 7707 6737 195 357 71 0 chr17 19285757 19285855 -66152625 - MIR SINE MIR -125 137 33 3344 109 57 24 chr17 19286034 19286574 -66151906 - LTR9B LTR ERV1 -86 558 1 14574 87 24 16 chr17 19286575 19289063 -66149417 - HUERS-P3b LTR ERV1 -7 7411 4832 2286 86 3 0 chr17 19289063 19289365 -66149115 - AluSp SINE Alu -10 303 1 14574 87 24 16 chr17 19289365 19289487 -66148993 - HUERS-P3b LTR ERV1 -2586 4832 4713 6070 79 10 9 chr17 19289478 19290276 -66148204 - HUERS-P3b LTR ERV1 -3544 3874 3076 * 1801 122 0 0 chr17 19290276 19290530 -66147950 - AluSg SINE Alu -4 306 53 2082 209 31 3 chr17 19290543 19290931 -66147549 + LTR8 LTR ERV1 1 399 -292 6890 118 15 7 chr17 19290931 19292692 -66145788 - HUERS-P3b LTR ERV1 -4760 2658 747 444 135 360 0 chr17 19292704 19292815 -66145665 - HUERS-P3b LTR ERV1 -6859 559 409 354 216 41 52 chr17 19292818 19292915 -66145565 - HUERS-P3b LTR ERV1 -7322 96 1 1228 122 0 58 chr17 19292915 19293120 -66145360 - LTR9B LTR ERV1 0 644 452 243 304 87 17 chr17 19293457 19293572 -66144908 + L3 LINE CR1 979 1101 -476 1170 122 22 63 chr17 19293578 19293800 -66144680 + MER2 DNA MER2_type 2 214 -131 2110 84 3 16 chr17 19293848 19294156 -66144324 + AluSc SINE Alu 1 304 -5 200 133 0 0 chr17 19294188 19294218 -66144262 + L2 LINE L2 3277 3306 -7 * 259 239 28 42 chr17 19294194 19294265 -66144215 - L2 LINE L2 -7 3265 3196 507 165 16 58 chr17 19294730 19294851 -66143629 + FAM SINE Alu 70 185 0 910 143 243 14 chr17 19295159 19295369 -66143111 + MER58B DNA MER1_type 79 336 -5 1607 85 0 0 chr17 19295926 19296138 -66142342 - AluSg/x SINE Alu -10 300 89 2128 89 0 10 chr17 19296141 19296474 -66142006 - AluSc SINE Alu 0 309 1 1203 256 92 63 chr17 19297154 19297967 -66140513 - L1MC5 LINE L1 -881 6927 6166 1492 222 126 28 chr17 19297967 19298427 -66140053 + MLT1D LTR MaLR 1 505 0 1203 256 92 63 chr17 19298427 19298879 -66139601 - L1MC5 LINE L1 -1642 6166 5729 935 248 99 40 chr17 19298878 19299420 -66139060 + L1MEc LINE L1 2156 2687 -3528 * 1515 152 4 37 chr17 19299428 19299697 -66138783 + AluJo SINE Alu 1 260 -52 1783 139 11 0 chr17 19299703 19299977 -66138503 - AluSg SINE Alu -33 277 1 1049 8 25 0 chr17 19299977 19300095 -66138385 + MER107 DNA MER1_type 25 145 -52 236 75 0 25 chr17 19300095 19300135 -66138345 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 2024 90 45 3 chr17 19300183 19300471 -66138009 - AluSg SINE Alu -10 300 1 2082 99 14 3 chr17 19300620 19300914 -66137566 - AluSx SINE Alu -15 297 1 1025 215 0 6 chr17 19300945 19301122 -66137358 + MER41D LTR ERV1 382 557 0 279 0 0 0 chr17 19301284 19301315 -66137165 + (TG)n Simple_repeat Simple_repeat 1 31 0 2237 79 0 26 chr17 19301757 19302061 -66136419 + AluY SINE Alu 1 296 -15 796 113 0 0 chr17 19302763 19302869 -66135611 - AluSq/x SINE Alu -206 107 2 2728 151 14 12 chr17 19303319 19303803 -66134677 - MER31A LTR ERV1 0 485 1 493 195 81 16 chr17 19304563 19304686 -66133794 - L1MA9 LINE L1 -1 6311 6181 267 247 67 0 chr17 19304689 19304778 -66133702 - L1MA9 LINE L1 -231 6081 5987 1775 187 31 72 chr17 19304895 19305382 -66133098 + MLT1C LTR MaLR 1 467 0 2155 101 0 3 chr17 19305438 19305736 -66132744 + AluSx SINE Alu 1 297 -15 333 0 0 0 chr17 19306205 19306242 -66132238 + (TG)n Simple_repeat Simple_repeat 2 38 0 4392 162 18 36 chr17 19306246 19306734 -66131746 - L1MB5 LINE L1 -19 6155 5687 1394 196 0 58 chr17 19306734 19306954 -66131526 + AluJo SINE Alu 1 199 -113 2113 88 3 3 chr17 19306954 19307238 -66131242 + AluSp SINE Alu 20 303 -10 1394 196 0 58 chr17 19307238 19307329 -66131151 + AluJo SINE Alu 199 294 -18 4392 162 18 36 chr17 19307329 19307678 -66130802 - L1MB5 LINE L1 -487 5687 5333 2138 108 10 3 chr17 19307688 19307995 -66130485 - AluSx SINE Alu -3 309 1 701 176 8 8 chr17 19308086 19308217 -66130263 - FLAM_C SINE Alu 0 133 3 1696 115 0 0 chr17 19308570 19308805 -66129675 - AluSq SINE Alu -65 248 14 1871 159 18 0 chr17 19308842 19309175 -66129305 + L1MB3 LINE L1 5838 6176 -7 1327 215 37 100 chr17 19309199 19309338 -66129142 + MER67B LTR ERV1 1 147 -514 1506 165 0 46 chr17 19309338 19309641 -66128839 + AluJo SINE Alu 1 289 -23 1327 215 37 100 chr17 19309641 19310043 -66128437 + MER67B LTR ERV1 147 409 -252 491 253 70 22 chr17 19310012 19310234 -66128246 + MER67D LTR ERV1 273 537 -6 * 1441 189 46 4 chr17 19310558 19310839 -66127641 - AluJo SINE Alu -19 293 1 198 291 51 43 chr17 19311873 19311990 -66126490 - MIR3 SINE MIR -83 125 8 738 278 44 9 chr17 19312085 19312312 -66126168 + MIR SINE MIR 16 250 -12 3792 191 41 50 chr17 19312350 19312391 -66126089 + L1MB2 LINE L1 5295 5335 -836 1979 120 0 7 chr17 19312391 19312699 -66125781 + AluY SINE Alu 1 306 -5 3792 191 41 50 chr17 19312699 19312966 -66125514 + L1MB2 LINE L1 5335 5603 -568 1515 173 55 0 chr17 19312966 19313238 -66125242 + AluJo SINE Alu 1 287 -25 3792 191 41 50 chr17 19313238 19313813 -66124667 + L1MB2 LINE L1 5603 6171 0 2216 88 3 0 chr17 19313819 19314114 -66124366 + AluSx SINE Alu 1 296 -16 929 299 170 22 chr17 19314361 19314496 -66123984 - L2 LINE L2 -1 3312 3198 1545 106 184 0 chr17 19314496 19314618 -66123862 + AluSq SINE Alu 1 99 -204 180 0 0 0 chr17 19314618 19314638 -66123842 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 1545 106 184 0 chr17 19314638 19314771 -66123709 + AluSq SINE Alu 99 303 0 929 299 170 22 chr17 19314771 19315040 -66123440 - L2 LINE L2 -115 3198 2848 198 233 0 82 chr17 19315192 19315246 -66123234 + MIR SINE MIR 47 95 -167 701 174 102 12 chr17 19315246 19315413 -66123067 - MER5A DNA MER1_type -4 185 4 198 233 0 82 chr17 19315413 19315431 -66123049 + MIR SINE MIR 95 113 -149 502 208 48 40 chr17 19316080 19316205 -66122275 - L2 LINE L2 0 3313 3188 1187 228 116 4 chr17 19316474 19316750 -66121730 + MLT1B-int LTR MaLR 1060 1366 -5 2225 130 28 33 chr17 19316756 19317147 -66121333 + MLT1B LTR MaLR 2 390 0 2151 109 7 0 chr17 19317362 19317664 -66120816 + AluSq SINE Alu 1 304 -9 2117 97 0 0 chr17 19317815 19318094 -66120386 + AluSg SINE Alu 1 279 -31 216 0 0 0 chr17 19318098 19318122 -66120358 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 419 277 38 25 chr17 19319081 19319240 -66119240 - L2 LINE L2 -40 3273 3113 2361 81 3 0 chr17 19319241 19319549 -66118931 + AluSp SINE Alu 1 309 -4 2112 118 0 7 chr17 19319557 19319861 -66118619 + AluSx SINE Alu 1 302 -10 373 258 121 93 chr17 19320358 19320606 -66117874 + MLT1K LTR MaLR 312 566 -22 1601 221 104 27 chr17 19320606 19320643 -66117837 - MLT2B1 LTR ERVL 0 520 487 402 21 0 0 chr17 19320643 19320690 -66117790 + (TG)n Simple_repeat Simple_repeat 2 48 0 1601 221 104 27 chr17 19320690 19321132 -66117348 - MLT2B1 LTR ERVL -33 487 4 769 255 166 18 chr17 19321401 19321738 -66116742 - MLT1J2 LTR MaLR -2 448 62 1056 196 19 19 chr17 19321861 19322070 -66116410 - MER20 DNA MER1_type 0 219 11 1691 155 0 51 chr17 19322397 19322545 -66115935 + AluJo SINE Alu 1 126 -186 2218 92 3 0 chr17 19322545 19322838 -66115642 + AluSx SINE Alu 2 295 -17 1691 155 0 51 chr17 19322838 19323005 -66115475 + AluJo SINE Alu 126 300 -12 1804 158 7 3 chr17 19323697 19324000 -66114480 + AluJo SINE Alu 1 304 -8 277 305 84 108 chr17 19324299 19324764 -66113716 + L2 LINE L2 2809 3262 -10 1563 191 34 0 chr17 19324764 19325058 -66113422 + AluJo SINE Alu 1 304 -8 757 171 0 68 chr17 19325137 19325230 -66113250 - L1MB3 LINE L1 0 6183 6106 2157 83 35 0 chr17 19325230 19325518 -66112962 - AluSx SINE Alu -14 298 1 757 171 0 68 chr17 19325518 19325600 -66112880 - L1MB3 LINE L1 -77 6106 6020 376 216 51 25 chr17 19325600 19325718 -66112762 - L1MB2 LINE L1 -108 6063 5940 797 184 0 0 chr17 19325719 19325844 -66112636 - FLAM_C SINE Alu -17 126 2 3198 132 6 0 chr17 19325844 19326336 -66112144 - L1MB3 LINE L1 -208 5975 5481 2214 203 56 8 chr17 19326384 19326863 -66111617 + MLT1D LTR MaLR 2 503 -2 294 255 20 10 chr17 19326864 19326966 -66111514 + L1ME3A LINE L1 5305 5407 -763 1214 192 89 47 chr17 19326967 19327326 -66111154 - MLT1A2 LTR MaLR 0 374 1 1960 155 3 40 chr17 19327326 19327680 -66110800 - MLT1A2-int LTR MaLR 0 1735 1395 371 262 180 61 chr17 19327744 19327940 -66110540 + L1ME3A LINE L1 5470 5641 -529 2185 92 0 3 chr17 19327940 19328232 -66110248 + AluSc SINE Alu 1 291 -18 371 262 180 61 chr17 19328232 19328462 -66110018 + L1ME3A LINE L1 5641 5947 -223 333 270 75 44 chr17 19328507 19328666 -66109814 + L1MC5 LINE L1 7767 7930 -31 211 302 0 0 chr17 19329214 19329277 -66109203 - L3 LINE CR1 -717 860 798 1935 137 0 3 chr17 19329333 19329659 -66108821 + AluSx SINE Alu 1 312 0 2954 82 40 72 chr17 19329756 19329774 -66108706 - MER31A LTR ERV1 0 485 468 2384 47 7 13 chr17 19329774 19330074 -66108406 + AluY SINE Alu 1 298 -13 2954 82 40 72 chr17 19330074 19330093 -66108387 - MER31A LTR ERV1 -17 468 450 2090 152 76 17 chr17 19330093 19330501 -66107979 + MSTB1 LTR MaLR 1 432 0 2954 82 40 72 chr17 19330501 19330963 -66107517 - MER31A LTR ERV1 -35 450 1 354 143 0 0 chr17 19330987 19331064 -66107416 + (TG)n Simple_repeat Simple_repeat 2 78 0 739 157 114 24 chr17 19331214 19331380 -66107100 + MER5A DNA MER1_type 7 187 -2 2173 69 0 69 chr17 19331822 19332156 -66106324 - AluY SINE Alu 0 311 1 1876 144 0 14 chr17 19332348 19332640 -66105840 - AluJo SINE Alu -24 288 1 330 309 43 29 chr17 19332695 19332834 -66105646 + MIR SINE MIR 49 189 -73 2066 117 0 3 chr17 19332863 19333162 -66105318 - AluSc SINE Alu -11 298 1 1919 104 11 0 chr17 19333190 19333468 -66105012 - AluSq SINE Alu -32 281 1 22 35 0 0 chr17 19333547 19333576 -66104904 + AT_rich Low_complexity Low_complexity 1 29 0 244 275 25 50 chr17 19333949 19334029 -66104451 + L2 LINE L2 1866 1943 -1371 349 332 115 46 chr17 19334117 19334421 -66104059 - L2 LINE L2 -5 3267 2943 321 290 104 37 chr17 19334503 19334908 -66103572 - L2 LINE L2 -222 3050 2563 2118 99 0 7 chr17 19334932 19335226 -66103254 + AluSc SINE Alu 1 292 -17 1651 185 0 3 chr17 19335236 19335528 -66102952 + AluJb SINE Alu 1 291 -21 716 304 15 0 chr17 19335554 19335755 -66102725 + MIR SINE MIR 47 250 -12 2177 194 57 5 chr17 19335935 19336358 -66102122 + LTR40c LTR ERVL 1 445 -20 204 167 0 0 chr17 19336361 19336397 -66102083 - L2 LINE L2 -1081 2233 2198 774 150 79 7 chr17 19336415 19336555 -66101925 + FRAM SINE Alu 1 149 -27 516 261 40 86 chr17 19336636 19336939 -66101541 - L2 LINE L2 -1214 2100 1812 1790 152 7 14 chr17 19336950 19337246 -66101234 + AluJb SINE Alu 1 294 -18 336 143 0 0 chr17 19337271 19337327 -66101153 + (GGAA)n Simple_repeat Simple_repeat 3 58 0 2746 114 10 22 chr17 19338079 19338319 -66100161 + MER31A LTR ERV1 1 242 -243 4309 128 71 6 chr17 19338319 19338993 -66099487 - LTR62 LTR ERVK -1 718 1 2746 114 10 22 chr17 19338993 19339243 -66099237 + MER31A LTR ERV1 242 485 0 473 305 23 11 chr17 19339897 19340071 -66098409 - MER5A DNA MER1_type -7 182 7 195 114 0 0 chr17 19340408 19340443 -66098037 + (CGGGG)n Simple_repeat Simple_repeat 5 39 0 29 47 0 0 chr17 19340443 19340486 -66097994 + GC_rich Low_complexity Low_complexity 1 43 0 29 28 0 0 chr17 19340520 19340556 -66097924 + GC_rich Low_complexity Low_complexity 1 36 0 25 0 0 0 chr17 19340719 19340744 -66097736 + GC_rich Low_complexity Low_complexity 1 25 0 22 0 0 0 chr17 19340795 19340817 -66097663 + GC_rich Low_complexity Low_complexity 1 22 0 37 62 0 0 chr17 19340926 19340991 -66097489 + GC_rich Low_complexity Low_complexity 1 65 0 185 333 16 0 chr17 19344049 19344112 -66094368 + MIR SINE MIR 84 147 -115 1566 162 29 11 chr17 19344933 19345205 -66093275 + AluJb SINE Alu 1 277 -35 525 58 0 0 chr17 19346966 19347035 -66091445 + (CA)n Simple_repeat Simple_repeat 1 69 0 1811 156 22 33 chr17 19347071 19347431 -66091049 - MLT1A1 LTR MaLR 0 365 10 21 36 0 0 chr17 19347686 19347714 -66090766 + AT_rich Low_complexity Low_complexity 1 28 0 2241 89 0 0 chr17 19348292 19348611 -66089869 - AluSc SINE Alu 0 319 1 232 315 101 0 chr17 19348753 19348842 -66089638 - L2 LINE L2 -2 3311 3214 451 265 94 39 chr17 19348910 19349091 -66089389 + MIR3 SINE MIR 4 194 -14 2332 88 3 0 chr17 19352011 19352317 -66086163 - AluSq SINE Alu -4 309 3 2420 126 25 0 chr17 19352318 19352794 -66085686 - MER1A DNA MER1_type 0 529 1 435 231 294 0 chr17 19353098 19353241 -66085239 - MER91A DNA MER1_type -11 185 1 213 345 95 0 chr17 19353724 19353840 -66084640 - L3b LINE CR1 -355 1228 1102 2156 132 7 0 chr17 19354181 19354491 -66083989 + AluSx SINE Alu 1 312 0 1937 114 33 127 chr17 19355369 19355482 -66082998 + MLT2D LTR ERVL 1 123 -291 1860 138 0 51 chr17 19355482 19355629 -66082851 + AluSx SINE Alu 1 125 -187 2588 49 0 0 chr17 19355629 19355934 -66082546 + AluY SINE Alu 1 305 -6 1860 138 0 51 chr17 19355934 19356098 -66082382 + AluSx SINE Alu 125 296 -16 1937 114 33 127 chr17 19356098 19356156 -66082324 + MLT2D LTR ERVL 123 185 -229 1502 142 9 139 chr17 19356156 19356288 -66082192 + AluJo SINE Alu 2 150 -152 2065 117 0 46 chr17 19356288 19356447 -66082033 - AluSx SINE Alu -19 293 128 183 42 0 0 chr17 19356447 19356471 -66082009 + (TTA)n Simple_repeat Simple_repeat 2 25 0 2122 91 3 11 chr17 19356471 19356756 -66081724 - AluY SINE Alu -28 283 1 2065 117 0 46 chr17 19356756 19356902 -66081578 - AluSx SINE Alu -182 130 1 1502 142 9 139 chr17 19356902 19357115 -66081365 + AluJo SINE Alu 150 302 0 1937 114 33 127 chr17 19357115 19357398 -66081082 + MLT2D LTR ERVL 185 413 -1 181 228 158 79 chr17 19357424 19357525 -66080955 + MIR SINE MIR 37 145 -63 2424 62 3 10 chr17 19357647 19357954 -66080526 - AluY SINE Alu -6 305 1 302 273 68 0 chr17 19358384 19358472 -66080008 - MIR3 SINE MIR -41 167 74 198 0 0 0 chr17 19359515 19359537 -66078943 + (CA)n Simple_repeat Simple_repeat 1 22 0 307 326 23 30 chr17 19360439 19360571 -66077909 - L3 LINE CR1 -19 1558 1428 1487 164 44 49 chr17 19360573 19360938 -66077542 - L1MB3 LINE L1 -1 6182 5820 877 256 150 34 chr17 19361257 19361671 -66076809 - MLT1C LTR MaLR 0 467 6 446 252 0 19 chr17 19361752 19361859 -66076621 + MLT1C LTR MaLR 312 416 -51 805 191 0 0 chr17 19363783 19363924 -66074556 - FRAM SINE Alu -35 141 1 3905 160 22 25 chr17 19363927 19364615 -66073865 - L1MB2 LINE L1 -3 6168 5483 1045 131 0 0 chr17 19365359 19365512 -66072968 + FRAM SINE Alu 11 163 -13 807 204 45 23 chr17 19365523 19365743 -66072737 - Charlie1 DNA MER1_type -190 2571 2347 329 259 78 0 chr17 19367276 19367392 -66071088 - MIR3 SINE MIR -51 157 33 313 340 82 0 chr17 19368119 19368266 -66070214 - MIR SINE MIR -24 238 80 230 192 77 77 chr17 19369521 19369599 -66068881 - LTR48B LTR ERV1 -562 82 5 517 256 155 14 chr17 19370574 19370747 -66067733 + Charlie8 DNA MER1_type 41 249 -92 583 248 38 105 chr17 19370747 19370957 -66067523 + MER91A DNA MER1_type 1 196 0 517 256 155 14 chr17 19370957 19370990 -66067490 + Charlie8 DNA MER1_type 249 276 -65 232 382 32 0 chr17 19371926 19372049 -66066431 - MIR SINE MIR -107 155 29 1739 184 92 9 chr17 19372357 19372694 -66065786 - MLT1A1 LTR MaLR 0 365 1 487 305 85 36 chr17 19373084 19373503 -66064977 + L2 LINE L2 2797 3237 -76 975 204 160 85 chr17 19373713 19373897 -66064583 - MLT1F1 LTR MaLR -8 559 390 2198 80 3 20 chr17 19373897 19374198 -66064282 + AluSp SINE Alu 2 297 -16 975 204 160 85 chr17 19374198 19374332 -66064148 - MLT1F1 LTR MaLR -177 390 267 2157 119 6 6 chr17 19374332 19374644 -66063836 - AluSx SINE Alu 0 312 1 975 204 160 85 chr17 19374644 19374664 -66063816 - MLT1F1 LTR MaLR -300 267 250 1724 160 0 26 chr17 19374664 19374970 -66063510 - AluJo SINE Alu -1 311 14 975 204 160 85 chr17 19374970 19375151 -66063329 - MLT1F1 LTR MaLR -317 250 8 611 239 91 5 chr17 19375166 19375363 -66063117 - LTR33 LTR ERVL -307 214 1 1083 139 0 5 chr17 19376160 19376633 -66061847 + (TCC)n Simple_repeat Simple_repeat 1 650 0 227 286 32 0 chr17 19376772 19376835 -66061645 - MLT1K LTR MaLR -10 578 514 646 268 49 0 chr17 19376854 19377018 -66061462 + MIR SINE MIR 11 182 -80 1788 100 8 15 chr17 19377039 19377300 -66061180 + AluSx SINE Alu 34 292 -20 799 134 27 13 chr17 19377301 19377450 -66061030 - MER39 LTR ERV1 0 707 557 2257 96 0 16 chr17 19377460 19377772 -66060708 + AluSx SINE Alu 6 312 0 554 224 0 9 chr17 19377789 19377905 -66060575 + FLAM_A SINE Alu 25 139 -3 2176 112 3 6 chr17 19377965 19378278 -66060202 - AluSp SINE Alu -1 312 1 2129 114 7 3 chr17 19378280 19378579 -66059901 - AluSx SINE Alu -12 300 1 1137 180 167 0 chr17 19378582 19379009 -66059471 - MER39 LTR ERV1 -158 495 3 213 303 0 45 chr17 19379015 19379081 -66059399 + MIR SINE MIR 199 261 -1 214 256 37 49 chr17 19379128 19379210 -66059270 - MIR SINE MIR -65 197 117 468 91 0 0 chr17 19379324 19379390 -66059090 + (TG)n Simple_repeat Simple_repeat 2 67 0 2099 88 0 0 chr17 19379406 19379679 -66058801 - AluSg SINE Alu -37 273 1 409 157 92 105 chr17 19379891 19379954 -66058526 + MER5B DNA MER1_type 1 63 -115 2181 96 10 3 chr17 19379954 19380255 -66058225 + AluSg SINE Alu 1 303 -7 409 157 92 105 chr17 19380255 19380309 -66058171 + MER5B DNA MER1_type 63 118 -60 1503 175 32 23 chr17 19380309 19380618 -66057862 - AluJb SINE Alu 0 312 1 409 157 92 105 chr17 19380618 19380652 -66057828 + MER5B DNA MER1_type 118 151 -27 2179 52 38 10 chr17 19380652 19380942 -66057538 + AluY SINE Alu 1 298 -13 2239 105 0 6 chr17 19381036 19381350 -66057130 - AluSx SINE Alu 0 312 1 328 301 0 0 chr17 19382460 19382543 -66055937 + MIR SINE MIR 109 191 -71 2210 82 7 0 chr17 19382773 19383053 -66055427 + AluSx SINE Alu 3 284 -28 186 71 0 0 chr17 19383053 19383081 -66055399 + (TTAAA)n Simple_repeat Simple_repeat 3 30 0 799 269 66 4 chr17 19383186 19383413 -66055067 - MIR SINE MIR -20 242 2 1589 200 51 3 chr17 19383760 19384127 -66054353 - MLT1B LTR MaLR -4 424 1 321 258 129 16 chr17 19384253 19384377 -66054103 + L2 LINE L2 3176 3313 0 1789 109 28 0 chr17 19385102 19385350 -66053130 + AluSq SINE Alu 13 267 -46 855 264 199 13 chr17 19386091 19386478 -66052002 + L2 LINE L2 2814 3272 0 2194 122 0 0 chr17 19386479 19386782 -66051698 + AluSx SINE Alu 1 303 -9 227 279 29 15 chr17 19386804 19386872 -66051608 - MIR SINE MIR -154 108 40 1000 134 0 0 chr17 19587264 19587406 -65851074 + AluSg/x SINE Alu 156 297 -15 218 357 87 8 chr17 19587660 19587786 -65850694 - MIR SINE MIR -8 254 119 342 229 125 62 chr17 19587967 19588111 -65850369 - MIR SINE MIR -107 155 3 1590 118 9 64 chr17 19588290 19588619 -65849861 - AluSx SINE Alu -1 311 1 364 276 31 0 chr17 19589300 19589398 -65849082 - MIR SINE MIR -122 140 40 1678 127 39 18 chr17 19589988 19590297 -65848183 - AluSx SINE Alu 0 315 1 270 212 71 12 chr17 19591111 19591196 -65847284 + MLT1C LTR MaLR 17 106 -399 1023 145 100 104 chr17 19591212 19591325 -65847155 + AluJo SINE Alu 1 113 -199 2185 68 10 14 chr17 19591325 19591618 -65846862 - AluSq SINE Alu -21 292 1 2398 62 3 3 chr17 19591624 19591929 -65846551 - AluY SINE Alu -6 305 1 1023 145 100 104 chr17 19591929 19592077 -65846403 + AluJo SINE Alu 118 268 -44 941 207 12 0 chr17 19592123 19592287 -65846193 + FRAM SINE Alu 1 166 0 423 194 231 36 chr17 19592287 19592534 -65845946 + MLT1C LTR MaLR 173 467 0 22 56 0 0 chr17 19592658 19592694 -65845786 + AT_rich Low_complexity Low_complexity 1 36 0 1803 128 7 11 chr17 19592697 19592978 -65845502 + AluSg SINE Alu 1 280 -30 21 57 0 0 chr17 19593528 19593563 -65844917 + GC_rich Low_complexity Low_complexity 1 35 0 222 310 0 60 chr17 19593715 19593815 -65844665 + MIR SINE MIR 60 153 -109 226 333 29 29 chr17 19594599 19594704 -65843776 - L2 LINE L2 -41 3231 3127 272 295 26 0 chr17 19594722 19594800 -65843680 - MIR SINE MIR -110 152 73 182 250 0 0 chr17 19595132 19595184 -65843296 + L3 LINE CR1 1423 1474 -103 308 261 65 0 chr17 19595718 19595810 -65842670 - MIR3 SINE MIR -49 159 62 346 289 19 10 chr17 19595944 19596048 -65842432 + MIR SINE MIR 17 121 -141 290 282 78 0 chr17 19596439 19596542 -65841938 - L2 LINE L2 -245 3027 2917 225 267 47 12 chr17 19597517 19597603 -65840877 - L2 LINE L2 -261 3011 2923 2123 103 3 7 chr17 19599021 19599312 -65839168 - AluSx SINE Alu -22 290 1 2091 100 0 7 chr17 19599319 19599623 -65838857 - AluSp SINE Alu 0 313 19 303 314 0 0 chr17 19602322 19602427 -65836053 + GA-rich Low_complexity Low_complexity 1 105 0 202 229 16 16 chr17 19603194 19603255 -65835225 + (CAGG)n Simple_repeat Simple_repeat 4 64 0 22 70 0 0 chr17 19604277 19604320 -65834160 + AT_rich Low_complexity Low_complexity 1 43 0 2279 82 7 7 chr17 19604594 19604900 -65833580 + AluY SINE Alu 1 306 -5 483 285 66 86 chr17 19605759 19606127 -65832353 - L1MCa LINE L1 -2732 3694 2194 488 180 0 50 chr17 19606137 19606237 -65832243 + AluSg/x SINE Alu 194 288 -22 1787 116 0 4 chr17 19606327 19606569 -65831911 - AluSx SINE Alu -71 241 1 269 194 113 0 chr17 19606595 19606657 -65831823 + MIR3 SINE MIR 86 154 -54 2356 85 0 0 chr17 19607007 19607301 -65831179 - AluSg SINE Alu -16 294 1 1702 145 76 0 chr17 19607305 19607581 -65830899 - AluJb SINE Alu -15 297 1 1662 78 9 0 chr17 19607590 19607807 -65830673 - AluSg/x SINE Alu -9 303 85 2258 95 0 3 chr17 19607810 19608115 -65830365 - AluSg SINE Alu -6 304 1 187 333 156 0 chr17 19608700 19608790 -65829690 + L2 LINE L2 3189 3292 -21 1384 164 25 12 chr17 19608790 19609034 -65829446 - AluSx SINE Alu -11 301 55 233 322 116 39 chr17 19611492 19611725 -65826755 + L2 LINE L2 2804 3054 -218 2246 71 3 3 chr17 19611737 19612032 -65826448 - AluY SINE Alu -16 295 1 316 312 136 16 chr17 19614121 19614246 -65824234 + MIR3 SINE MIR 55 194 -14 1492 154 56 25 chr17 19614347 19614633 -65823847 - AluJo SINE Alu -17 295 1 1665 185 48 0 chr17 19614643 19614935 -65823545 - AluSx SINE Alu -6 306 1 2061 126 10 0 chr17 19614943 19615244 -65823236 - AluSp SINE Alu -9 304 1 729 185 0 8 chr17 19616268 19616387 -65822093 + FLAM_C SINE Alu 1 118 -25 2229 107 3 0 chr17 19616394 19616694 -65821786 - AluSc SINE Alu -8 301 1 29 0 0 0 chr17 19616695 19616724 -65821756 + AT_rich Low_complexity Low_complexity 1 29 0 2310 77 3 7 chr17 19617152 19617462 -65821018 - AluY SINE Alu -2 309 1 847 178 41 0 chr17 19617472 19617618 -65820862 - AluJb SINE Alu -23 289 138 868 9 0 18 chr17 19617626 19617737 -65820743 + (TCTA)n Simple_repeat Simple_repeat 1 109 0 1753 130 50 11 chr17 19617737 19618005 -65820475 - AluSx SINE Alu -30 282 1 1924 128 31 0 chr17 19619364 19619653 -65818827 - AluSx SINE Alu -14 298 1 2152 153 239 29 chr17 19622497 19622956 -65815524 + L1MC3 LINE L1 6906 7267 -518 1812 141 10 35 chr17 19622956 19623268 -65815212 + AluSx SINE Alu 1 304 -8 2152 153 239 29 chr17 19623268 19623527 -65814953 + L1MC3 LINE L1 7267 7775 -10 190 299 52 41 chr17 19623554 19623651 -65814829 + MIR SINE MIR 21 118 -90 799 227 0 0 chr17 19623652 19623802 -65814678 + AluJo SINE Alu 114 263 -49 2100 90 22 4 chr17 19625026 19625303 -65813177 + AluSx SINE Alu 1 282 -30 2291 33 0 60 chr17 19625802 19626103 -65812377 - AluY SINE Alu -28 283 1 802 141 0 8 chr17 19626106 19626234 -65812246 - AluJo/FLAM SINE Alu -181 131 5 234 282 239 8 chr17 19626236 19626353 -65812127 + MIR SINE MIR 119 262 0 194 320 100 10 chr17 19626417 19626517 -65811963 + L2 LINE L2 3186 3294 -19 263 278 56 0 chr17 19626565 19626655 -65811825 - MIR3 SINE MIR -53 155 61 266 319 11 0 chr17 19629744 19629838 -65808642 + MIR SINE MIR 58 152 -56 191 175 75 0 chr17 19629893 19629933 -65808547 - MIR SINE MIR -73 135 93 2212 104 0 0 chr17 19632377 19632674 -65805806 + AluSc SINE Alu 1 297 -12 813 128 0 0 chr17 19632681 19632988 -65805492 + AluSp SINE Alu 1 307 0 1595 209 36 25 chr17 19633010 19633369 -65805111 - MLT1A1 LTR MaLR -2 363 1 2217 85 0 7 chr17 19633545 19633839 -65804641 - AluSc SINE Alu -17 292 1 337 243 93 28 chr17 19634361 19634468 -65804012 + MIR SINE MIR 113 226 -36 1166 188 58 0 chr17 19635405 19635628 -65802852 + AluJo SINE Alu 1 236 -76 495 160 0 0 chr17 19635642 19635717 -65802763 - AluJ/FLAM SINE Alu -220 92 18 1836 152 10 10 chr17 19635736 19636038 -65802442 - AluSx SINE Alu -10 302 1 2236 179 63 72 chr17 19636336 19636895 -65801585 - MLT2B3 LTR ERVL 0 554 1 2299 64 0 0 chr17 19637283 19637598 -65800882 + AluY SINE Alu 1 315 0 185 289 218 27 chr17 19640172 19640539 -65797941 + L2 LINE L2 2084 2520 -794 2176 78 7 14 chr17 19641660 19641953 -65796527 - AluSx SINE Alu -21 291 1 425 243 19 10 chr17 19643319 19643422 -65795058 - L2 LINE L2 -1 3271 3168 203 259 0 37 chr17 19644129 19644183 -65794297 - L2 LINE L2 0 3272 3221 221 30 61 0 chr17 19646406 19646439 -65792041 + (CAGG)n Simple_repeat Simple_repeat 4 38 0 2094 125 0 7 chr17 19648719 19649024 -65789456 + AluSg1 SINE Alu 3 305 -4 229 301 64 16 chr17 19649051 19649165 -65789315 - MIR3 SINE MIR -54 154 63 241 256 61 12 chr17 19650818 19650900 -65787580 + MIR SINE MIR 59 144 -118 214 333 14 0 chr17 19651768 19651837 -65786643 + MIR SINE MIR 62 131 -77 369 253 312 5 chr17 19652072 19652293 -65786187 + L2 LINE L2 2472 2760 -554 824 263 121 26 chr17 19652294 19652640 -65785840 + L2 LINE L2 2913 3291 -22 1840 145 14 17 chr17 19652983 19653279 -65785201 + AluJb SINE Alu 1 295 -17 222 289 0 0 chr17 19653710 19653762 -65784718 + MIR SINE MIR 87 138 -70 244 200 0 0 chr17 19654062 19654107 -65784373 - MIR SINE MIR -62 146 102 198 103 0 0 chr17 19654151 19654180 -65784300 + (CAGGG)n Simple_repeat Simple_repeat 3 31 0 358 243 30 30 chr17 19654364 19654533 -65783947 + (CAGAGA)n Simple_repeat Simple_repeat 2 170 0 268 207 44 44 chr17 19654762 19654897 -65783583 + (CCCGG)n Simple_repeat Simple_repeat 2 136 0 41 83 0 23 chr17 19655010 19655142 -65783338 + GC_rich Low_complexity Low_complexity 1 129 0 185 342 40 0 chr17 19655446 19655522 -65782958 + MIR SINE MIR 90 168 -94 212 352 48 0 chr17 19655552 19655677 -65782803 + L2 LINE L2 2894 3024 -248 398 317 32 0 chr17 19656215 19656338 -65782142 - MIR SINE MIR -19 243 117 194 245 75 0 chr17 19656421 19656474 -65782006 + MIR SINE MIR 16 72 -136 1647 136 13 53 chr17 19656501 19656803 -65781677 + AluJb SINE Alu 1 290 -22 1683 123 105 7 chr17 19656803 19657088 -65781392 + AluSq SINE Alu 1 313 0 705 190 0 14 chr17 19657092 19657234 -65781246 + MIR SINE MIR 51 190 -72 2740 83 33 7 chr17 19657234 19657620 -65780860 + MER41A LTR ERV1 1 400 -154 2107 110 7 0 chr17 19657620 19657912 -65780568 + AluSp SINE Alu 1 294 -19 2740 83 33 7 chr17 19657912 19657944 -65780536 + MER41A LTR ERV1 400 430 -124 2205 132 0 0 chr17 19657947 19658258 -65780222 - AluSx SINE Alu 0 312 2 2136 114 0 25 chr17 19658270 19658585 -65779895 - AluY SINE Alu -4 307 1 220 228 166 48 chr17 19658885 19659030 -65779450 + MER5A DNA MER1_type 5 166 -23 405 290 39 91 chr17 19659582 19659725 -65778755 + MIR SINE MIR 31 159 -103 2135 93 0 3 chr17 19659725 19660016 -65778464 + AluY SINE Alu 1 290 -21 405 290 39 91 chr17 19660016 19660103 -65778377 + MIR SINE MIR 159 249 -13 1971 109 23 46 chr17 19660120 19660424 -65778056 + AluSg SINE Alu 1 297 -13 2115 103 6 58 chr17 19660440 19660575 -65777905 + AluSx SINE Alu 1 141 -171 1810 147 23 3 chr17 19660575 19660881 -65777599 + AluSq SINE Alu 2 313 0 2115 103 6 58 chr17 19660881 19661074 -65777406 + AluSx SINE Alu 141 312 0 274 295 66 43 chr17 19661843 19662014 -65776466 - MIR3 SINE MIR -17 191 16 249 180 33 16 chr17 19662226 19662287 -65776193 + MIR SINE MIR 102 163 -99 * 524 170 36 40 chr17 19662276 19662457 -65776023 - MIR SINE MIR -2 260 33 2292 75 0 40 chr17 19663182 19663504 -65774976 - AluSc SINE Alu 0 309 1 305 107 0 36 chr17 19663504 19663560 -65774920 + (TTTTC)n Simple_repeat Simple_repeat 5 58 0 2063 133 10 0 chr17 19663570 19663872 -65774608 - AluSq SINE Alu -8 305 1 199 185 169 0 chr17 19663903 19663968 -65774512 + L2 LINE L2 2671 2746 -568 1135 157 129 11 chr17 19663977 19664263 -65774217 - MER63 DNA MER1_type -1 1061 742 442 186 23 23 chr17 19664268 19664354 -65774126 - FRAM/FAM SINE Alu -90 86 1 387 184 29 0 chr17 19664371 19664474 -65774006 - Charlie5 DNA MER1_type -27 2585 2480 931 79 0 8 chr17 19664476 19664603 -65773877 - AluSg/x SINE Alu -8 304 179 731 152 74 29 chr17 19664628 19664650 -65773830 - MER33 DNA MER1_type -97 65 45 1664 139 65 24 chr17 19664650 19664944 -65773536 - AluSx SINE Alu -6 306 1 731 152 74 29 chr17 19664944 19665128 -65773352 - MER33 DNA MER1_type -117 45 1 227 140 18 0 chr17 19665121 19665148 -65773332 - MER63 DNA MER1_type -405 656 631 * 2195 96 20 3 chr17 19665148 19665449 -65773031 + AluY SINE Alu 1 306 -5 227 140 18 0 chr17 19665449 19665478 -65773002 - MER63 DNA MER1_type -430 631 599 799 133 25 0 chr17 19665764 19665884 -65772596 - AluSq/x SINE Alu -190 123 1 238 349 57 9 chr17 19666883 19666989 -65771491 + MIR SINE MIR 82 192 -70 2196 112 3 0 chr17 19666999 19667304 -65771176 - AluSx SINE Alu -6 306 1 298 308 108 15 chr17 19667808 19667938 -65770542 - MIR SINE MIR -73 189 48 2244 73 0 42 chr17 19668163 19668476 -65770004 - AluY SINE Alu -11 300 1 2152 122 0 0 chr17 19668482 19668785 -65769695 - AluSg SINE Alu -7 303 1 803 224 93 24 chr17 19669969 19670174 -65768306 + MER20 DNA MER1_type 1 219 0 349 371 114 15 chr17 19670305 19670577 -65767903 + L2 LINE L2 2969 3267 -5 291 326 155 5 chr17 19670572 19670759 -65767721 - MIR SINE MIR -1 261 47 * 28 0 0 0 chr17 19672155 19672183 -65766297 + AT_rich Low_complexity Low_complexity 1 28 0 327 121 0 0 chr17 19673183 19673241 -65765239 + (CGG)n Simple_repeat Simple_repeat 1 58 0 1767 115 42 11 chr17 19674701 19674988 -65763492 + AluJb SINE Alu 2 297 -15 201 147 0 0 chr17 19675284 19675318 -65763162 + (CCCCCT)n Simple_repeat Simple_repeat 5 38 0 1661 135 31 24 chr17 19675321 19675610 -65762870 - AluJb SINE Alu -21 291 1 916 237 66 0 chr17 19675635 19675846 -65762634 - MIR SINE MIR -15 247 23 197 328 103 60 chr17 19676479 19676781 -65761699 + L2 LINE L2 2466 2780 -534 2092 128 0 0 chr17 19676782 19677078 -65761402 - AluSx SINE Alu -16 296 1 2006 131 13 0 chr17 19677091 19677397 -65761083 - AluSx SINE Alu -2 310 1 180 359 16 0 chr17 19677592 19677656 -65760824 + L2 LINE L2 3249 3313 0 361 238 0 12 chr17 19677793 19677877 -65760603 - L2 LINE L2 -1 3312 3230 235 279 49 66 chr17 19677876 19677998 -65760482 + L2 LINE L2 2940 3059 -213 * 209 266 89 13 chr17 19678607 19678686 -65759794 - MIR SINE MIR -69 139 55 490 281 7 40 chr17 19678973 19679185 -65759295 + MIR SINE MIR 3 206 -56 2438 67 0 0 chr17 19679185 19679482 -65758998 - AluSc SINE Alu -12 297 1 611 294 92 0 chr17 19679754 19679938 -65758542 - MIR SINE MIR -19 243 43 246 250 40 50 chr17 19680115 19680215 -65758265 - MIR SINE MIR -65 143 45 311 299 255 10 chr17 19680235 19680439 -65758041 + L2 LINE L2 3019 3272 0 1089 275 154 16 chr17 19680560 19680682 -65757798 - L2 LINE L2 0 3313 3209 2298 144 52 80 chr17 19680682 19680736 -65757744 + MSTB LTR MaLR 1 55 -371 1958 120 40 3 chr17 19680736 19681035 -65757445 + AluSx SINE Alu 1 310 -2 2298 144 52 80 chr17 19681035 19681418 -65757062 + MSTB LTR MaLR 55 426 0 1089 275 154 16 chr17 19681418 19681731 -65756749 - L2 LINE L2 -104 3209 2818 1934 151 0 16 chr17 19681976 19682281 -65756199 + AluSx SINE Alu 1 300 -12 915 140 0 22 chr17 19682353 19682489 -65755991 + FLAM_C SINE Alu 1 133 0 1538 133 80 39 chr17 19682943 19683229 -65755251 - AluJo SINE Alu -11 301 4 525 174 37 37 chr17 19683877 19683986 -65754494 + MIR SINE MIR 34 142 -66 274 172 0 78 chr17 19683984 19684048 -65754432 - L2 LINE L2 -4 3309 3251 * 642 178 23 31 chr17 19684122 19684251 -65754229 - BC200 scRNA scRNA -60 140 13 1324 223 68 8 chr17 19684261 19684628 -65753852 + LTR16C LTR ERVL 100 488 -3 1797 141 67 48 chr17 19684646 19685022 -65753458 + MLT1B LTR MaLR 1 383 -7 616 302 6 12 chr17 19685026 19685195 -65753285 - MIR SINE MIR -40 222 55 367 287 11 0 chr17 19686123 19686217 -65752263 - MIR SINE MIR -97 165 71 451 309 179 0 chr17 19686621 19686822 -65751658 + MIR SINE MIR 16 252 -10 1673 146 3 44 chr17 19686901 19687242 -65751238 + AluJb SINE Alu 1 329 0 758 198 79 0 chr17 19687360 19687537 -65750943 + Charlie1b DNA MER1_type 72 262 -261 1148 114 0 34 chr17 19687574 19687750 -65750730 - AluJb SINE Alu -3 309 140 593 97 164 12 chr17 19687755 19687920 -65750560 + Charlie1b DNA MER1_type 277 466 -57 1134 137 0 0 chr17 19687922 19688083 -65750397 - AluSg/x SINE Alu -17 293 133 1968 118 3 14 chr17 19688093 19688407 -65750073 - AluSq SINE Alu 0 311 1 435 19 0 0 chr17 19688407 19688459 -65750021 + (TTA)n Simple_repeat Simple_repeat 2 53 0 2062 98 0 37 chr17 19688459 19688755 -65749725 - AluSq SINE Alu -28 285 1 282 125 107 0 chr17 19688757 19688813 -65749667 + Charlie1b DNA MER1_type 462 523 0 766 149 7 84 chr17 19688869 19688981 -65749499 + AluJo SINE Alu 1 99 -213 2330 77 3 13 chr17 19688981 19689291 -65749189 - AluY SINE Alu -4 307 1 766 149 7 84 chr17 19689291 19689332 -65749148 + AluJo SINE Alu 99 142 -170 217 176 20 0 chr17 19689378 19689429 -65749051 + (TAAA)n Simple_repeat Simple_repeat 1 52 0 351 318 16 0 chr17 19689438 19689564 -65748916 - L1ME LINE L1 -340 5781 5654 371 285 32 81 chr17 19690284 19690470 -65748010 - MER5A DNA MER1_type -3 186 10 225 340 45 0 chr17 19691278 19691378 -65747102 + MIR SINE MIR 40 147 -61 610 212 30 86 chr17 19691823 19691854 -65746626 + MIR SINE MIR 74 105 -157 2821 151 44 42 chr17 19691854 19692358 -65746122 + MLT1D LTR MaLR 1 505 0 610 212 30 86 chr17 19692358 19692464 -65746016 + MIR SINE MIR 105 215 -47 1490 111 194 0 chr17 19692464 19692717 -65745763 - AluSp SINE Alu -11 302 1 1997 139 27 3 chr17 19692717 19693017 -65745463 - AluSx SINE Alu -4 308 1 610 212 30 86 chr17 19693017 19693075 -65745405 + MIR SINE MIR 213 260 -2 219 258 48 0 chr17 19693607 19693669 -65744811 - L2 LINE L2 -214 3058 2994 359 319 106 0 chr17 19693993 19694134 -65744346 + MIR SINE MIR 20 175 -87 2433 83 0 0 chr17 19694545 19694857 -65743623 - AluSx SINE Alu 0 312 1 431 239 80 0 chr17 19695066 19695204 -65743276 - MIR SINE MIR -65 197 49 1297 230 144 45 chr17 19696843 19697335 -65741145 + MLT1K LTR MaLR 48 588 0 252 302 0 0 chr17 19697335 19697402 -65741078 - MIR SINE MIR -64 144 86 215 83 0 0 chr17 19698532 19698567 -65739913 - MIR SINE MIR -115 147 114 338 329 16 13 chr17 19699938 19700102 -65738378 - MIR SINE MIR -33 175 27 263 293 22 89 chr17 19701074 19701232 -65737248 - L2 LINE L2 -284 2988 2841 390 250 67 0 chr17 19701906 19702010 -65736470 + MIR SINE MIR 35 145 -63 231 240 60 70 chr17 19703096 19703196 -65735284 + MIR3 SINE MIR 109 207 -1 29 0 0 0 chr17 19703842 19703871 -65734609 + AT_rich Low_complexity Low_complexity 1 29 0 2209 80 0 3 chr17 19703871 19704160 -65734320 - AluSq SINE Alu -25 288 1 1193 97 0 0 chr17 19704298 19704453 -65734027 - AluSc SINE Alu -154 155 1 621 278 167 29 chr17 19704455 19705029 -65733451 - L2 LINE L2 -27 3286 2658 * 684 261 22 0 chr17 19705020 19705200 -65733280 + MIR SINE MIR 9 192 -70 277 320 30 14 chr17 19707282 19707431 -65731049 - MIR SINE MIR -44 218 67 1144 146 12 0 chr17 19707599 19707770 -65730710 - FRAM SINE Alu -5 171 1 191 271 17 0 chr17 19708186 19708245 -65730235 + MIR SINE MIR 79 138 -70 205 321 45 75 chr17 19709898 19710032 -65728448 + MIR SINE MIR 14 143 -119 596 272 71 0 chr17 19710283 19710467 -65728013 - MIR SINE MIR -29 233 37 437 224 10 0 chr17 19710536 19710634 -65727846 - MIR SINE MIR -21 241 143 1838 155 0 17 chr17 19710635 19710932 -65727548 - AluJo SINE Alu -20 292 1 370 267 0 0 chr17 19710933 19711023 -65727457 - U13 snRNA snRNA -14 90 1 727 234 0 0 chr17 19711024 19711169 -65727311 - MIR SINE MIR -115 147 3 259 333 28 35 chr17 19711210 19711351 -65727129 - L3b LINE CR1 -170 1413 1274 1825 157 14 3 chr17 19711857 19712143 -65726337 - AluJb SINE Alu -23 289 1 391 276 92 51 chr17 19712511 19712728 -65725752 + L2 LINE L2 2967 3192 -80 21 0 0 0 chr17 19712753 19712774 -65725706 + AT_rich Low_complexity Low_complexity 1 21 0 215 310 86 0 chr17 19713167 19713284 -65725196 - MIR SINE MIR -62 146 44 219 328 0 0 chr17 19714184 19714245 -65724235 + GA-rich Low_complexity Low_complexity 6 66 0 363 305 202 15 chr17 19714467 19714670 -65723810 - MIR SINE MIR -2 260 20 348 205 13 13 chr17 19714954 19715032 -65723448 - MIR SINE MIR -79 129 52 261 152 0 0 chr17 19715205 19715251 -65723229 - L3 LINE CR1 -106 1471 1426 296 247 0 13 chr17 19716048 19716125 -65722355 - MER91B DNA MER1_type -28 162 87 226 321 71 27 chr17 19716138 19716250 -65722230 - MER91B DNA MER1_type -60 130 14 257 133 0 22 chr17 19716304 19716349 -65722131 - MER91B DNA MER1_type -152 44 1 275 307 0 59 chr17 19716595 19716696 -65721784 - MIR SINE MIR -88 174 80 190 258 91 30 chr17 19717199 19717265 -65721215 - L3 LINE CR1 -102 1475 1406 192 216 0 0 chr17 19718244 19718281 -65720199 - MIR SINE MIR -114 148 112 628 247 18 30 chr17 19718410 19718576 -65719904 - MIR SINE MIR -79 183 20 300 349 34 51 chr17 19719069 19719244 -65719236 + L2 LINE L2 3007 3178 -94 180 274 71 12 chr17 19719265 19719349 -65719131 - MIR SINE MIR -74 134 46 260 192 0 0 chr17 19719559 19719611 -65718869 - L3 LINE CR1 -111 1466 1415 1014 261 70 0 chr17 19720163 19720404 -65718076 + MIR SINE MIR 1 258 -4 196 282 109 55 chr17 19720618 19720728 -65717752 + L2 LINE L2 3197 3312 -1 554 268 78 52 chr17 19721356 19721587 -65716893 - L2 LINE L2 -117 3155 2919 2307 82 3 10 chr17 19721934 19722238 -65716242 + AluSp SINE Alu 1 302 -11 1293 95 0 0 chr17 19722238 19722407 -65716073 + AluSq SINE Alu 135 303 -10 1699 138 49 23 chr17 19722409 19722713 -65715767 + AluJo SINE Alu 1 312 0 875 139 0 53 chr17 19722823 19722974 -65715506 - FLAM_C SINE Alu 0 143 1 231 294 76 8 chr17 19723004 19723123 -65715357 + L1P LINE L1 4918 5044 -1102 21 36 0 0 chr17 19723188 19723216 -65715264 + AT_rich Low_complexity Low_complexity 1 28 0 2249 80 0 3 chr17 19723286 19723609 -65714871 + AluSc SINE Alu 1 322 0 1935 99 0 51 chr17 19723617 19723909 -65714571 + AluSx SINE Alu 1 277 -35 369 313 16 49 chr17 19723927 19724122 -65714358 + L1M4 LINE L1 5171 5367 -779 791 220 13 0 chr17 19724590 19724749 -65713731 - MIR SINE MIR 0 262 102 1174 288 40 19 chr17 19725472 19725899 -65712581 - L2 LINE L2 -25 3288 2853 453 19 0 0 chr17 19726699 19726753 -65711727 + (CA)n Simple_repeat Simple_repeat 2 55 0 456 265 262 16 chr17 19726992 19727377 -65711103 + L2 LINE L2 2833 3312 -1 2048 123 7 3 chr17 19727392 19727700 -65710780 + AluSc SINE Alu 1 309 0 531 226 153 15 chr17 19727767 19727904 -65710576 - MIR SINE MIR -18 244 89 242 280 11 75 chr17 19728074 19728167 -65710313 - MIR3 SINE MIR -47 161 75 275 290 253 20 chr17 19728301 19728598 -65709882 + MLT1K LTR MaLR 142 507 -81 363 328 46 0 chr17 19728786 19728917 -65709563 + MIR SINE MIR 108 244 -18 565 303 160 33 chr17 19729245 19729699 -65708781 + L2 LINE L2 2248 2643 -670 186 103 0 0 chr17 19729699 19729728 -65708752 + (TA)n Simple_repeat Simple_repeat 2 30 0 565 303 160 33 chr17 19729728 19729875 -65708605 + L2 LINE L2 2643 3313 0 2258 65 3 46 chr17 19731824 19732147 -65706333 - AluY SINE Alu -2 309 1 488 244 16 24 chr17 19732487 19732614 -65705866 + MIR SINE MIR 46 171 -91 463 297 152 12 chr17 19732679 19732844 -65705636 - MIR SINE MIR -44 218 31 194 295 114 48 chr17 19734968 19735073 -65703407 - MIR SINE MIR -70 192 81 22 0 0 0 chr17 19736306 19736328 -65702152 + GC_rich Low_complexity Low_complexity 1 22 0 330 244 28 44 chr17 19736652 19736832 -65701648 + G-rich Low_complexity Low_complexity 2 178 0 224 315 0 0 chr17 19738685 19738758 -65699722 + CT-rich Low_complexity Low_complexity 1 73 0 241 381 24 8 chr17 19739132 19739258 -65699222 - MIR SINE MIR -88 174 47 426 259 50 22 chr17 19739507 19739646 -65698834 + MIR3 SINE MIR 15 157 -51 266 341 77 0 chr17 19740111 19740202 -65698278 + MIR SINE MIR 51 148 -114 237 313 12 0 chr17 19740262 19740342 -65698138 + CT-rich Low_complexity Low_complexity 2 82 0 2157 121 3 0 chr17 19740613 19740919 -65697561 - AluSx SINE Alu -5 307 1 458 256 135 25 chr17 19741019 19741195 -65697285 - MIR SINE MIR -65 143 3 488 249 165 17 chr17 19741456 19741693 -65696787 - L2 LINE L2 0 3313 3042 1344 279 168 44 chr17 19741748 19741928 -65696552 - L2 LINE L2 -412 2902 2746 2106 123 3 0 chr17 19741928 19742221 -65696259 - AluSx SINE Alu -18 294 1 1344 279 168 44 chr17 19742221 19742997 -65695483 - L2 LINE L2 -568 2746 1827 2228 113 0 3 chr17 19743006 19743316 -65695164 + AluSq SINE Alu 1 309 -4 313 167 61 53 chr17 19743319 19743433 -65695047 + L1MB8 LINE L1 6064 6178 0 411 286 40 0 chr17 19743546 19743672 -65694808 + L1MC4a LINE L1 5768 5898 -1910 432 0 0 0 chr17 19743714 19743762 -65694718 + (TG)n Simple_repeat Simple_repeat 2 49 0 1784 150 66 0 chr17 19743792 19744078 -65694402 - AluSx SINE Alu -2 310 6 1352 176 83 7 chr17 19744128 19744406 -65694074 + AluJo SINE Alu 1 299 -13 2021 155 0 3 chr17 19744412 19744722 -65693758 + AluSx SINE Alu 2 310 -2 1703 163 0 41 chr17 19744850 19745144 -65693336 + AluSx SINE Alu 1 282 -30 222 328 144 8 chr17 19745650 19745775 -65692705 + MIR SINE MIR 86 227 -35 819 296 96 42 chr17 19746036 19746187 -65692293 - L2 LINE L2 0 3272 3131 1639 197 17 3 chr17 19746187 19746482 -65691998 - AluJo SINE Alu -9 303 5 819 296 96 42 chr17 19746482 19746823 -65691657 - L2 LINE L2 -141 3131 2776 244 260 27 0 chr17 19746834 19746907 -65691573 - MIR SINE MIR -12 250 176 544 239 142 13 chr17 19747030 19747185 -65691295 - MIR SINE MIR -75 187 13 189 128 21 43 chr17 19749037 19749084 -65689396 + L2 LINE L2 3016 3061 -211 204 171 0 0 chr17 19749163 19749198 -65689282 + L2 LINE L2 3254 3288 -25 1774 147 33 13 chr17 19750562 19750868 -65687612 + AluJo SINE Alu 1 312 0 192 267 100 40 chr17 19752358 19752508 -65685972 + L2 LINE L2 2922 3080 -192 2264 85 20 0 chr17 19754898 19755193 -65683287 - AluSg SINE Alu -9 301 1 183 42 0 0 chr17 19755815 19755839 -65682641 + (AGGTG)n Simple_repeat Simple_repeat 4 27 0 235 305 211 0 chr17 19756344 19756439 -65682041 - L3 LINE CR1 -32 1545 1431 573 265 19 49 chr17 19758139 19758341 -65680139 - MIR SINE MIR -25 237 41 333 306 77 15 chr17 19759800 19759959 -65678521 + MIR SINE MIR 31 196 -63 312 314 58 22 chr17 19760733 19760870 -65677610 + L2 LINE L2 2572 2713 -601 4197 181 113 2 chr17 19760870 19761832 -65676648 + L1MC3 LINE L1 6711 7779 -6 2262 90 0 19 chr17 19761833 19762145 -65676335 + AluSq SINE Alu 1 306 -7 1665 104 13 0 chr17 19762220 19762450 -65676030 + AluSq SINE Alu 2 234 -79 2501 70 3 0 chr17 19762528 19762840 -65675640 - AluSp SINE Alu 0 313 1 826 262 182 31 chr17 19762844 19763347 -65675133 + L2 LINE L2 2737 3313 0 186 361 25 58 chr17 19763852 19763915 -65674565 + L2 LINE L2 2724 2788 -526 2264 91 7 0 chr17 19763915 19764212 -65674268 + AluSp SINE Alu 1 299 -14 186 361 25 58 chr17 19764212 19764251 -65674229 + L2 LINE L2 2788 2827 -487 2635 242 67 27 chr17 19764251 19765002 -65673478 + MER20B DNA MER1_type 1 781 -3 186 361 25 58 chr17 19765002 19765066 -65673414 + L2 LINE L2 2827 2883 -431 1312 184 88 32 chr17 19765066 19765349 -65673131 - AluJo SINE Alu -13 299 1 186 361 25 58 chr17 19765349 19765421 -65673059 + L2 LINE L2 2883 2956 -358 23 0 0 0 chr17 19965541 19965564 -65472916 + AT_rich Low_complexity Low_complexity 1 23 0 2389 98 0 0 chr17 19965564 19965860 -65472620 + AluSg SINE Alu 1 296 -14 2770 201 41 60 chr17 19965903 19966800 -65471680 - L1MDa LINE L1 -4402 2138 1259 2974 0 0 0 chr17 19966822 19967162 -65471318 + AluY SINE Alu 1 340 0 21 0 0 0 chr17 19967364 19967385 -65471095 + AT_rich Low_complexity Low_complexity 1 21 0 1966 103 0 94 chr17 19967542 19967672 -65470808 + AluSx SINE Alu 14 155 -157 2289 114 13 0 chr17 19967672 19967980 -65470500 + AluSx SINE Alu 1 312 0 1966 103 0 94 chr17 19967980 19968160 -65470320 + AluSx SINE Alu 155 296 -16 2526 93 0 0 chr17 19968160 19968471 -65470009 + AluSx SINE Alu 1 311 -1 2332 100 10 0 chr17 19968644 19968953 -65469527 + AluSp SINE Alu 1 312 -1 302 245 68 68 chr17 19968981 19969144 -65469336 + L1MDa LINE L1 2441 2603 -3937 1480 101 10 10 chr17 19969155 19969362 -65469118 + AluSc SINE Alu 1 207 -102 2530 63 0 0 chr17 19969467 19969766 -65468714 - AluY SINE Alu -12 299 1 322 250 24 24 chr17 19969782 19969866 -65468614 - MLT1K LTR MaLR -92 496 413 507 33 0 0 chr17 19970302 19970363 -65468117 + (TA)n Simple_repeat Simple_repeat 2 62 0 3226 178 13 7 chr17 19970817 19971372 -65467108 - MER68 LTR ERV1 -4 558 1 2899 226 76 25 chr17 19971568 19972400 -65466080 + L1MC4 LINE L1 6694 7567 -475 480 77 0 0 chr17 19973312 19973377 -65465103 + (TA)n Simple_repeat Simple_repeat 1 65 0 2380 69 3 20 chr17 19973752 19974058 -65464422 - AluY SINE Alu -6 305 5 629 289 83 49 chr17 19974230 19974579 -65463901 + MLT1K LTR MaLR 75 435 -153 2161 74 70 0 chr17 19975023 19975294 -65463186 - AluSc SINE Alu -19 290 1 2226 102 7 0 chr17 19975513 19975808 -65462672 - AluSp SINE Alu -16 297 1 410 269 77 66 chr17 19976700 19976882 -65461598 - MIR SINE MIR -56 206 23 2314 86 0 10 chr17 19977090 19977392 -65461088 - AluSq SINE Alu -14 299 1 2310 100 25 0 chr17 19977392 19977713 -65460767 - L1P4 LINE L1 -394 5772 5444 306 289 283 11 chr17 19978131 19978318 -65460162 - MIR SINE MIR -11 251 14 949 222 93 15 chr17 19978389 19978659 -65459821 - L1M4 LINE L1 -1736 4410 4120 206 118 0 0 chr17 19978661 19978695 -65459785 + (TTTTTG)n Simple_repeat Simple_repeat 1 34 0 211 157 56 56 chr17 19979002 19979110 -65459370 + (GCTTG)n Simple_repeat Simple_repeat 4 111 0 948 62 0 0 chr17 19979858 19979971 -65458509 + AluSg SINE Alu 1 113 -197 355 310 0 0 chr17 19980147 19980309 -65458171 + AluY SINE Alu 173 334 0 1487 254 114 36 chr17 19980309 19980832 -65457648 - L1MDb LINE L1 -5293 1116 635 420 37 0 0 chr17 19980832 19980886 -65457594 + (TG)n Simple_repeat Simple_repeat 2 55 0 1487 254 114 36 chr17 19980886 19981316 -65457164 - L1MDb LINE L1 -5774 635 16 265 290 43 38 chr17 19981368 19981592 -65456888 + L1MC4a LINE L1 2517 2742 -3404 1082 177 51 55 chr17 19981649 19981698 -65456782 - MER33 DNA MER1_type -2275 310 262 2467 60 0 3 chr17 19981698 19981996 -65456484 - AluY SINE Alu -14 297 1 1082 177 51 55 chr17 19981996 19982257 -65456223 - MER33 DNA MER1_type -2323 262 1 501 297 148 58 chr17 19982263 19982647 -65455833 + L1MC4a LINE L1 2786 3134 -3012 2177 109 0 7 chr17 19982647 19982930 -65455550 + AluSx SINE Alu 1 281 -31 501 297 148 58 chr17 19982930 19983464 -65455016 + L1MC4a LINE L1 3134 3759 -2387 1975 47 0 8 chr17 19983501 19983737 -65454743 - AluY SINE Alu -77 234 1 2154 104 0 57 chr17 19983739 19984055 -65454425 - AluY SINE Alu -13 298 1 1669 140 4 0 chr17 19984066 19984309 -65454171 - AluSx SINE Alu -8 304 61 2326 85 7 26 chr17 19984891 19985197 -65453283 + AluSx SINE Alu 1 300 -12 21 0 0 0 chr17 19989646 19989667 -65448813 + GC_rich Low_complexity Low_complexity 1 21 0 198 0 0 0 chr17 19989751 19989773 -65448707 + (CCG)n Simple_repeat Simple_repeat 2 23 0 622 233 27 53 chr17 19989899 19989995 -65448485 + Charlie1 DNA MER1_type 2506 2603 -158 783 188 0 0 chr17 19989995 19990128 -65448352 - FLAM_C SINE Alu 0 133 1 622 233 27 53 chr17 19990128 19990293 -65448187 + Charlie1 DNA MER1_type 2603 2760 -1 382 330 142 42 chr17 19990296 19990945 -65447535 - L2 LINE L2 -436 2878 2165 2473 64 0 3 chr17 19991061 19991356 -65447124 + AluY SINE Alu 2 295 -16 715 239 61 0 chr17 19991456 19991636 -65446844 + MER58A DNA MER1_type 30 220 -4 399 279 33 16 chr17 19991638 19991760 -65446720 + MER102a DNA MER1_type 205 328 -2 315 325 105 4 chr17 19992305 19992533 -65445947 + L1MC4a LINE L1 4738 4988 -1158 25 51 0 0 chr17 19992617 19992656 -65445824 + AT_rich Low_complexity Low_complexity 1 39 0 462 233 96 44 chr17 19992674 19992983 -65445497 + L1MC4a LINE L1 5189 5503 -661 351 256 15 58 chr17 19993120 19993257 -65445223 + L1ME3A LINE L1 5769 5899 -271 1138 96 0 13 chr17 19993403 19993560 -65444920 - AluSg/x SINE Alu 0 312 158 358 167 0 15 chr17 19993761 19993827 -65444653 - MER58 DNA MER1_type 0 2420 2356 1719 163 55 23 chr17 19993842 19994149 -65444331 + MLT1A1 LTR MaLR 19 335 -30 659 273 6 36 chr17 19994162 19994327 -65444153 - MER58A DNA MER1_type 0 160 1 225 94 0 0 chr17 19994386 19994418 -65444062 + (T)n Simple_repeat Simple_repeat 1 32 0 2249 158 80 5 chr17 19994424 19994822 -65443658 + MSTA LTR MaLR 1 428 0 2443 82 0 7 chr17 19995323 19995626 -65442854 + AluY SINE Alu 2 302 -9 870 284 48 34 chr17 19998008 19998423 -65440057 + L1MC4a LINE L1 5647 6067 -1741 295 250 0 0 chr17 19998755 19998827 -65439653 - L2 LINE L2 -5 3308 3237 566 262 33 71 chr17 19998881 19999091 -65439389 + MIR SINE MIR 56 257 -5 3224 207 65 10 chr17 19999143 20000244 -65438236 + Charlie1a DNA MER1_type 5 1228 -227 29 0 0 0 chr17 20001193 20001222 -65437258 + AT_rich Low_complexity Low_complexity 1 29 0 1738 75 5 0 chr17 20001321 20001535 -65436945 - AluSp SINE Alu -14 299 85 1133 75 0 0 chr17 20004104 20004237 -65434243 - AluSq/x SINE Alu -180 133 1 647 286 35 5 chr17 20004292 20004495 -65433985 + L1ME LINE L1 5440 5648 -514 213 121 0 0 chr17 20005146 20005179 -65433301 + (A)n Simple_repeat Simple_repeat 1 33 0 575 306 120 73 chr17 20005964 20006481 -65431999 + MLT1K LTR MaLR 46 586 -2 2243 102 14 0 chr17 20006687 20006982 -65431498 - AluSx SINE Alu -13 299 1 2129 128 3 0 chr17 20007076 20007373 -65431107 - AluY SINE Alu -13 298 1 223 264 83 58 chr17 20008359 20008480 -65430000 + MER5A DNA MER1_type 44 167 -22 453 347 76 18 chr17 20010163 20010506 -65427974 + L2 LINE L2 2391 2753 -561 1410 233 108 12 chr17 20010552 20011026 -65427454 + MLT1E LTR MaLR 21 578 -15 360 290 180 5 chr17 20011490 20011707 -65426773 + HAL1 LINE L1 1240 1494 -1013 2674 43 3 0 chr17 20011861 20012166 -65426314 + AluY SINE Alu 1 306 -5 190 286 0 0 chr17 20012875 20012931 -65425549 + L2 LINE L2 3258 3313 0 2134 147 70 0 chr17 20012974 20013348 -65425132 - L1MA4A LINE L1 -10 6293 5894 1894 128 23 7 chr17 20013476 20013782 -65424698 + AluY SINE Alu 1 311 0 973 327 72 28 chr17 20013828 20014483 -65423997 + L2 LINE L2 2019 2702 -612 794 186 0 0 chr17 20014495 20014624 -65423856 - FLAM_C SINE Alu 0 133 5 401 253 24 41 chr17 20014639 20014659 -65423821 - L1MA10 LINE L1 -2 6332 6313 1809 211 18 23 chr17 20014659 20015099 -65423381 - L1ME2 LINE L1 -9 6224 5787 332 248 43 34 chr17 20015102 20015219 -65423261 - L1ME2 LINE L1 -3992 2404 2287 1721 224 89 36 chr17 20015344 20015791 -65422689 + Charlie1a DNA MER1_type 1 471 -984 434 179 73 24 chr17 20015802 20015925 -65422555 - MER69 DNA AcHobo -206 2320 2192 770 138 40 13 chr17 20016033 20016185 -65422295 - L1MC3 LINE L1 -97 7688 7533 894 299 24 6 chr17 20016308 20016649 -65421831 - L1ME2 LINE L1 -6014 382 36 546 279 128 23 chr17 20016664 20016883 -65421597 + L2 LINE L2 2702 2943 -371 248 252 89 0 chr17 20017150 20017285 -65421195 + L1P LINE L1 5255 5401 -750 38 22 0 0 chr17 20017302 20017347 -65421133 + AT_rich Low_complexity Low_complexity 1 45 0 262 214 143 0 chr17 20017350 20017420 -65421060 + L1MC4a LINE L1 5482 5561 -560 304 259 56 5 chr17 20017505 20017702 -65420778 + L1MC4a LINE L1 5707 5824 -297 1138 170 9 5 chr17 20018026 20018238 -65420242 - MER20 DNA MER1_type -5 214 2 274 360 40 0 chr17 20018802 20018902 -65419578 + MIR3 SINE MIR 94 197 -11 1587 194 11 7 chr17 20020694 20020997 -65417483 + AluJo SINE Alu 2 305 0 2474 76 0 0 chr17 20022328 20022619 -65415861 + AluSc SINE Alu 3 293 -16 568 229 113 85 chr17 20022680 20023033 -65415447 + LTR52 LTR ERVL 1 363 -58 326 263 50 40 chr17 20023976 20024075 -65414405 - L1MC4 LINE L1 -1339 6703 6604 605 312 50 74 chr17 20024107 20024316 -65414164 + L2 LINE L2 2113 2325 -989 1009 145 177 0 chr17 20024316 20024502 -65413978 - MER20 DNA MER1_type 0 219 1 605 312 50 74 chr17 20024502 20024647 -65413833 + L2 LINE L2 2325 2456 -858 2668 42 0 3 chr17 20024647 20024954 -65413526 - AluY SINE Alu -5 306 1 605 312 50 74 chr17 20024954 20025059 -65413421 + L2 LINE L2 2456 2562 -752 2572 56 0 7 chr17 20026155 20026457 -65412023 + AluY SINE Alu 1 300 -11 953 256 120 21 chr17 20026572 20026947 -65411533 + MLT1J1 LTR MaLR 15 426 -20 2733 48 0 0 chr17 20027496 20027807 -65410673 + AluY SINE Alu 1 311 0 249 271 29 14 chr17 20029101 20029171 -65409309 - MIR3 SINE MIR -17 191 121 350 193 80 23 chr17 20029344 20029432 -65409048 + L2 LINE L2 3180 3272 0 555 265 176 20 chr17 20029811 20030015 -65408465 + MIR SINE MIR 22 257 -5 193 0 472 0 chr17 20030740 20030776 -65407704 - MIR SINE MIR -123 139 87 236 296 141 3 chr17 20031288 20031415 -65407065 + MIR3 SINE MIR 4 144 -78 435 253 71 18 chr17 20031434 20031604 -65406876 - MIR SINE MIR 0 262 84 314 159 32 0 chr17 20032198 20032261 -65406219 + AluYb8 SINE Alu 244 308 0 2175 82 14 10 chr17 20032300 20032593 -65405887 - AluSx SINE Alu -18 294 1 1246 122 56 49 chr17 20032593 20032833 -65405647 - L1M2c LINE L1 -4824 1965 1721 2404 65 0 62 chr17 20032833 20033156 -65405324 - AluY SINE Alu -8 303 1 1246 122 56 49 chr17 20033156 20033203 -65405277 - L1M2c LINE L1 -5068 1721 1676 1414 104 5 5 chr17 20033303 20033496 -65404984 + AluSq SINE Alu 104 296 -17 4943 238 20 52 chr17 20033497 20035208 -65403272 - L1M2c LINE L1 -5353 1436 14 338 270 71 48 chr17 20035275 20035401 -65403079 - L1M4 LINE L1 -2196 3950 3822 2380 102 3 0 chr17 20035431 20035734 -65402746 + AluSx SINE Alu 1 304 -8 2079 99 0 64 chr17 20035745 20036059 -65402421 + AluY SINE Alu 1 294 -17 1017 278 47 23 chr17 20037614 20038085 -65400395 + L1MC4 LINE L1 7556 8037 -5 2251 78 0 0 chr17 20038249 20038565 -65399915 - AluY SINE Alu 0 316 1 2064 65 34 71 chr17 20038592 20038915 -65399565 - AluY SINE Alu 0 311 1 1297 78 0 12 chr17 20039085 20039252 -65399228 - AluSp SINE Alu -7 306 142 1999 114 0 14 chr17 20039252 20039533 -65398947 - AluSq SINE Alu -36 277 1 430 298 73 29 chr17 20039538 20039743 -65398737 + L1ME3A LINE L1 5360 5573 -589 1002 122 37 16 chr17 20039857 20040046 -65398434 - L1MA8 LINE L1 -71 6220 6028 1130 282 50 43 chr17 20040065 20040290 -65398190 + L1ME3A LINE L1 5600 5822 -348 2425 82 0 7 chr17 20040290 20040595 -65397885 + AluY SINE Alu 1 303 -8 1130 282 50 43 chr17 20040595 20040926 -65397554 + L1ME3A LINE L1 5822 6160 -10 569 245 98 16 chr17 20041514 20041800 -65396680 - MLT2F LTR ERVL -86 577 204 297 0 0 0 chr17 20041803 20041836 -65396644 + (TG)n Simple_repeat Simple_repeat 1 33 0 239 314 14 0 chr17 20043219 20043289 -65395191 + (CACG)n Simple_repeat Simple_repeat 2 72 0 242 145 16 65 chr17 20043589 20043651 -65394829 - SN5 Other centromeric -77 378 320 265 195 0 23 chr17 20044100 20044187 -65394293 - HSAT5 Satellite Satellite -1 85 1 298 230 0 29 chr17 20044218 20044319 -65394161 - HSAT5 Satellite Satellite -1 98 1 198 0 0 0 chr17 20049721 20049743 -65388737 + (TTCC)n Simple_repeat Simple_repeat 1 22 0 907 322 43 27 chr17 20050293 20050960 -65387520 + L1MC3 LINE L1 5479 6156 -1629 212 314 13 33 chr17 20052881 20053034 -65385446 + (CGGG)n Simple_repeat Simple_repeat 3 152 0 28 0 0 0 chr17 20054082 20054110 -65384370 + AT_rich Low_complexity Low_complexity 1 28 0 789 212 20 6 chr17 20054209 20054511 -65383969 - MLT1A2 LTR MaLR 0 374 1 651 172 83 30 chr17 20055045 20055214 -65383266 + MER3 DNA MER1_type 19 196 -13 2218 119 23 0 chr17 20055409 20055711 -65382769 + AluSg SINE Alu 1 309 -1 1116 98 7 0 chr17 20055784 20055937 -65382543 - AluSg/x SINE Alu 0 312 159 1635 201 0 3 chr17 20056018 20056312 -65382168 - AluJb SINE Alu -15 297 5 22 70 0 0 chr17 20056559 20056602 -65381878 + AT_rich Low_complexity Low_complexity 1 43 0 2195 105 7 3 chr17 20056608 20056904 -65381576 - AluSx SINE Alu -15 297 1 189 74 0 0 chr17 20057173 20057200 -65381280 + (CA)n Simple_repeat Simple_repeat 2 28 0 1131 133 0 0 chr17 20057928 20058086 -65380394 + AluSp SINE Alu 138 295 -18 194 0 39 0 chr17 20058750 20058776 -65379704 + (TTTA)n Simple_repeat Simple_repeat 4 30 0 1813 99 0 12 chr17 20060227 20060469 -65378011 - AluSq SINE Alu -74 239 1 1812 130 47 0 chr17 20063988 20064264 -65374216 + AluY SINE Alu 13 301 -10 712 294 17 0 chr17 20064889 20065066 -65373414 - MIR SINE MIR -3 259 80 213 346 86 25 chr17 20065129 20065291 -65373189 + MER5B DNA MER1_type 7 178 0 185 355 58 16 chr17 20065443 20065564 -65372916 + L2 LINE L2 3143 3268 -4 1197 211 132 19 chr17 20065911 20066176 -65372304 + AluJo SINE Alu 1 295 -7 1551 182 0 14 chr17 20066190 20066470 -65372010 + AluJb SINE Alu 16 291 -21 322 256 13 32 chr17 20066649 20066805 -65371675 + GA-rich Low_complexity Low_complexity 2 154 0 1801 130 3 42 chr17 20068532 20068840 -65369640 - AluY SINE Alu -5 306 11 23 0 0 0 chr17 20068996 20069019 -65369461 + AT_rich Low_complexity Low_complexity 1 23 0 409 295 15 25 chr17 20069096 20069296 -65369184 - L1ME4a LINE L1 -194 5927 5730 225 0 0 0 chr17 20069349 20069374 -65369106 + (TG)n Simple_repeat Simple_repeat 2 26 0 743 239 6 19 chr17 20069377 20069536 -65368944 - AluJo SINE Alu -31 281 125 241 208 104 31 chr17 20069542 20069638 -65368842 - L1ME4a LINE L1 -439 5682 5580 1417 184 0 12 chr17 20069898 20070153 -65368327 + AluSx SINE Alu 1 252 -60 469 230 0 0 chr17 20070263 20070350 -65368130 - AluJb SINE Alu -90 222 136 926 147 40 6 chr17 20070353 20070530 -65367950 - L1MA5 LINE L1 0 6300 6118 1124 130 0 6 chr17 20070540 20070702 -65367778 + AluSg/x SINE Alu 136 296 -16 2781 141 23 51 chr17 20070702 20071233 -65367247 - L1MA5 LINE L1 -192 6108 5593 3827 178 27 47 chr17 20071625 20072657 -65365823 - L1MA5 LINE L1 -692 5608 4600 5078 144 14 20 chr17 20072699 20074335 -65364145 - L1PA16 LINE L1 -1 6816 5200 180 0 0 0 chr17 20074335 20074355 -65364125 + (T)n Simple_repeat Simple_repeat 1 20 0 412 245 182 0 chr17 20075267 20075426 -65363054 + LTR50 LTR ERVL 1 188 -607 312 241 126 11 chr17 20075513 20075687 -65362793 + LTR33A LTR ERVL 323 516 -7 7744 243 48 53 chr17 20076158 20076694 -65361786 - L1PA16 LINE L1 -1575 5222 4685 749 195 0 47 chr17 20076694 20076843 -65361637 - FLAM_C SINE Alu 0 143 2 7744 243 48 53 chr17 20076843 20077633 -65360847 - L1PA16 LINE L1 -2112 4685 3893 222 37 0 0 chr17 20077633 20077660 -65360820 + (TTTA)n Simple_repeat Simple_repeat 1 27 0 7744 243 48 53 chr17 20077660 20080046 -65358434 - L1PA16 LINE L1 -2904 3893 1362 2428 127 0 12 chr17 20080709 20081047 -65357433 + MER1B DNA MER1_type 4 337 0 309 323 6 49 chr17 20081146 20081310 -65357170 - L1PA16 LINE L1 -5268 1519 1363 * 1016 332 31 38 chr17 20081308 20081922 -65356558 - L1PA16 LINE L1 -6177 610 1 1329 200 33 87 chr17 20081943 20082424 -65356056 - L1MDa LINE L1 -1536 5004 4550 * 6640 233 85 26 chr17 20082415 20083650 -65354830 - L1 LINE L1 -2399 4809 3648 182 37 37 0 chr17 20083650 20083677 -65354803 + (TTTTA)n Simple_repeat Simple_repeat 3 30 0 6640 233 85 26 chr17 20083677 20084202 -65354278 - L1 LINE L1 -3560 3648 3155 1935 162 0 13 chr17 20084202 20084517 -65353963 - AluSx SINE Alu -1 311 1 6640 233 85 26 chr17 20084517 20086454 -65352026 - L1 LINE L1 -4053 3155 841 869 235 5 0 chr17 20086546 20086756 -65351724 - L1 LINE L1 -6628 581 13 251 282 0 14 chr17 20087916 20087987 -65350493 + Tigger5 DNA MER2_type 2249 2318 -5 357 250 0 25 chr17 20088005 20088085 -65350395 - Tigger5 DNA MER2_type -2244 79 2 1200 283 142 20 chr17 20088461 20088954 -65349526 - MLT1G1 LTR MaLR 0 595 2 2123 81 19 42 chr17 20089703 20090011 -65348469 + AluY SINE Alu 1 301 -10 1196 188 48 45 chr17 20091978 20092292 -65346188 - L1MDa LINE L1 -2148 5060 4746 1153 111 7 0 chr17 20092312 20092465 -65346015 - AluSq SINE Alu -159 154 1 365 239 23 0 chr17 20092520 20092608 -65345872 - MER66A LTR ERV1 -141 337 248 639 232 0 7 chr17 20092608 20092746 -65345734 - L1MDa LINE L1 -2506 4702 4566 1725 230 99 48 chr17 20092935 20093415 -65345065 - L1MDa LINE L1 -2652 4556 4027 2060 104 20 7 chr17 20093415 20093713 -65344767 - AluSg SINE Alu -8 302 1 1725 230 99 48 chr17 20093713 20093942 -65344538 - L1MDa LINE L1 -3181 4027 3811 864 195 29 75 chr17 20093942 20094183 -65344297 - L1MB8 LINE L1 0 6178 5949 * 912 220 41 8 chr17 20094163 20094408 -65344072 - L1MDa LINE L1 -3391 3817 3565 9186 180 98 73 chr17 20094418 20094570 -65343910 - L1MDa LINE L1 -3890 3499 3352 1872 140 17 20 chr17 20094570 20094870 -65343610 - AluSx SINE Alu -13 299 1 9186 180 98 73 chr17 20094870 20096259 -65342221 - L1MDa LINE L1 -4037 3352 1998 2256 77 3 27 chr17 20096259 20096556 -65341924 - AluSp SINE Alu -23 290 1 9186 180 98 73 chr17 20096556 20096634 -65341846 - L1MDa LINE L1 -5391 1998 1923 2338 76 13 7 chr17 20096634 20096938 -65341542 - AluY SINE Alu -5 306 1 9186 180 98 73 chr17 20096938 20098035 -65340445 - L1MDa LINE L1 -5466 1923 669 330 353 72 7 chr17 20098092 20098245 -65340235 - L1MC4 LINE L1 -478 7564 7402 1390 278 88 8 chr17 20098281 20098778 -65339702 - L1MC4 LINE L1 -722 7320 6784 225 360 80 8 chr17 20098927 20099052 -65339428 + L2 LINE L2 3125 3258 -14 461 261 118 17 chr17 20100238 20100505 -65337975 - L1MB8 LINE L1 -303 5881 5576 714 187 8 8 chr17 20101135 20101258 -65337222 - FLAM_A SINE Alu -10 123 1 30 45 0 0 chr17 20101268 20101312 -65337168 + AT_rich Low_complexity Low_complexity 1 44 0 893 293 180 20 chr17 20101428 20102063 -65336417 - L2 LINE L2 -1 3312 2574 438 305 112 34 chr17 20102192 20102619 -65335861 - HAL1b LINE L1 -772 576 107 2059 73 0 0 chr17 20102619 20102867 -65335613 - AluY SINE Alu -21 290 43 438 305 112 34 chr17 20102867 20102911 -65335569 - HAL1b LINE L1 -1241 107 68 2524 64 0 0 chr17 20103149 20103445 -65335035 - AluY SINE Alu -15 296 1 1839 131 60 0 chr17 20103637 20103920 -65334560 + AluJo SINE Alu 1 300 -12 925 244 47 73 chr17 20104074 20104330 -65334150 - L1MC4 LINE L1 -2156 5652 5410 565 170 198 0 chr17 20104330 20104436 -65334044 + FLAM_A SINE Alu 1 127 -6 925 244 47 73 chr17 20104436 20104588 -65333892 - L1MC4 LINE L1 -2398 5410 5255 356 281 119 73 chr17 20104702 20104819 -65333661 - L1MC4 LINE L1 -1014 5132 5022 2212 97 23 7 chr17 20104819 20105127 -65333353 - AluSp SINE Alu 0 313 1 356 281 119 73 chr17 20105127 20105149 -65333331 - L1MC4 LINE L1 -1124 5022 5002 633 121 0 10 chr17 20105149 20105248 -65333232 + L1PA5 LINE L1 6057 6154 0 356 281 119 73 chr17 20105248 20105492 -65332988 - L1MC4 LINE L1 -1144 5002 4730 1025 45 15 0 chr17 20106058 20106192 -65332288 + (TTTC)n Simple_repeat Simple_repeat 4 139 0 2047 124 7 0 chr17 20106194 20106477 -65332003 - AluSq SINE Alu -28 285 1 465 249 202 0 chr17 20106608 20106781 -65331699 - L2 LINE L2 0 3313 3106 613 292 43 36 chr17 20106843 20107090 -65331390 + MIR SINE MIR 3 249 -13 324 343 217 10 chr17 20108319 20108402 -65330078 + L2 LINE L2 2281 2346 -968 2388 197 100 28 chr17 20108402 20108931 -65329549 + MLT1F1 LTR MaLR 1 567 0 324 343 217 10 chr17 20108931 20109238 -65329242 + L2 LINE L2 2346 2752 -562 1286 150 68 18 chr17 20109668 20109888 -65328592 - AluJb SINE Alu -14 298 68 872 178 6 24 chr17 20109888 20109904 -65328576 - L1M3 LINE L1 -552 5616 5601 2465 150 11 56 chr17 20109904 20110372 -65328108 - L1MB1 LINE L1 -1 6167 5721 872 178 6 24 chr17 20110372 20110524 -65327956 - L1M3 LINE L1 -567 5601 5451 37 0 0 0 chr17 20111223 20111260 -65327220 + AT_rich Low_complexity Low_complexity 1 37 0 30 45 0 0 chr17 20111825 20111869 -65326611 + AT_rich Low_complexity Low_complexity 1 44 0 2482 67 0 13 chr17 20112162 20112477 -65326003 + AluY SINE Alu 1 311 0 1801 176 10 3 chr17 20112492 20112794 -65325686 - AluJo SINE Alu -8 304 1 1747 144 0 91 chr17 20113350 20113670 -65324810 + AluJb SINE Alu 1 291 -21 2949 134 126 21 chr17 20113716 20113830 -65324650 - MER1A DNA MER1_type -2174 526 425 2427 74 6 10 chr17 20113830 20114142 -65324338 - AluY SINE Alu 0 311 1 2949 134 126 21 chr17 20114142 20114503 -65323977 - MER1A DNA MER1_type -2275 425 1 1219 123 28 6 chr17 20114685 20114894 -65323586 + AluJo SINE Alu 100 312 0 866 170 0 0 chr17 20115367 20115502 -65322978 + AluJo SINE Alu 1 135 -177 2314 109 0 0 chr17 20116071 20116374 -65322106 - AluSx SINE Alu -9 303 1 321 162 0 0 chr17 20116751 20116804 -65321676 - L2 LINE L2 -1 3312 3219 2142 78 27 10 chr17 20116980 20117275 -65321205 + AluY SINE Alu 1 300 -11 1474 184 14 18 chr17 20117384 20117666 -65320814 - AluJo SINE Alu -31 281 1 2067 119 3 0 chr17 20117695 20117990 -65320490 - AluSx SINE Alu -16 296 1 335 228 90 16 chr17 20118073 20118314 -65320166 - L1MB1 LINE L1 -617 5547 5285 291 247 74 37 chr17 20118369 20118559 -65319921 - L1MB1 LINE L1 -2828 3318 3122 4258 169 97 29 chr17 20120101 20120940 -65317540 - MER21A LTR ERV1 0 931 36 209 120 40 0 chr17 20120979 20121029 -65317451 + (TCTA)n Simple_repeat Simple_repeat 3 54 0 1352 181 37 50 chr17 20121755 20122054 -65316426 - AluJb SINE Alu -17 295 1 328 221 77 0 chr17 20122072 20122176 -65316304 - L1ME4a LINE L1 -11 6110 5999 1608 123 8 0 chr17 20122211 20122446 -65316034 - AluSx SINE Alu -75 237 1 211 212 24 24 chr17 20122616 20122701 -65315779 + (TA)n Simple_repeat Simple_repeat 1 85 0 4379 202 133 27 chr17 20122702 20122987 -65315493 - L1MB7 LINE L1 -6 6178 5925 1560 159 76 4 chr17 20122987 20123264 -65315216 - AluJb SINE Alu -15 297 1 4379 202 133 27 chr17 20123264 20123967 -65314513 - L1MB7 LINE L1 -259 5925 5298 2261 108 50 9 chr17 20123967 20124310 -65314170 - L1PA14 LINE L1 -1 6160 5804 4379 202 133 27 chr17 20124310 20125530 -65312950 - L1MB7 LINE L1 -886 5298 3729 432 300 52 14 chr17 20125570 20125780 -65312700 - L1ME4a LINE L1 -298 5823 5606 985 167 11 39 chr17 20126023 20126203 -65312277 - FAM SINE Alu 0 175 1 249 57 0 0 chr17 20126372 20126407 -65312073 + (TG)n Simple_repeat Simple_repeat 2 36 0 249 217 150 17 chr17 20126749 20126869 -65311611 - L1ME4a LINE L1 -11 6110 5975 537 266 73 52 chr17 20127142 20127390 -65311090 + MLT1K LTR MaLR 335 587 -1 211 173 39 0 chr17 20128467 20128519 -65309961 + GA-rich Low_complexity Low_complexity 2 55 0 1907 144 0 3 chr17 20129914 20130206 -65308274 - AluSx SINE Alu -21 291 1 510 322 38 6 chr17 20130253 20130436 -65308044 - MIR SINE MIR -53 209 21 1119 178 48 117 chr17 20130525 20130669 -65307811 + AluJo SINE Alu 2 115 -187 1536 208 0 3 chr17 20130669 20130963 -65307517 + AluJo SINE Alu 3 295 -17 1119 178 48 117 chr17 20130963 20131127 -65307353 + AluJo SINE Alu 115 289 -13 1813 163 0 0 chr17 20131214 20131503 -65306977 - AluSx SINE Alu -23 289 1 568 284 12 31 chr17 20131514 20131771 -65306709 - L1ME4a LINE L1 -301 5820 5569 240 280 40 20 chr17 20131893 20131993 -65306487 - L1ME4a LINE L1 -669 5452 5351 2037 129 6 0 chr17 20132457 20132768 -65305712 - AluSq SINE Alu 0 313 1 448 199 7 103 chr17 20132871 20133007 -65305473 + MIR SINE MIR 103 225 -37 521 325 44 15 chr17 20133318 20133660 -65304820 + L1ME LINE L1 5270 5621 -500 26 98 0 0 chr17 20133714 20133796 -65304684 + AT_rich Low_complexity Low_complexity 1 82 0 1591 159 43 4 chr17 20134314 20134591 -65303889 - AluJo SINE Alu -24 288 1 306 282 104 31 chr17 20134642 20134805 -65303675 - L2 LINE L2 -2 3311 3137 333 337 60 5 chr17 20136149 20136333 -65302147 + L2 LINE L2 3120 3313 0 400 298 93 28 chr17 20136406 20136654 -65301826 - L2 LINE L2 -427 2887 2624 499 183 9 43 chr17 20137238 20137353 -65301127 - MLT1B LTR MaLR 0 390 280 1428 146 24 8 chr17 20137354 20137600 -65300880 + AluJo SINE Alu 36 285 -27 1335 140 13 31 chr17 20137625 20137854 -65300626 - MLT1B LTR MaLR -164 226 2 447 19 0 0 chr17 20137959 20138011 -65300469 + (TTCG)n Simple_repeat Simple_repeat 2 53 0 224 291 114 0 chr17 20138130 20138209 -65300271 - L2 LINE L2 -1 3312 3225 2436 175 26 113 chr17 20138480 20139149 -65299331 - L1ME1 LINE L1 -263 5903 5353 2083 108 3 20 chr17 20139149 20139455 -65299025 + AluSq SINE Alu 1 301 -12 2436 175 26 113 chr17 20139455 20139780 -65298700 - L1ME1 LINE L1 -813 5353 5001 664 246 117 88 chr17 20142651 20143247 -65295233 - L2 LINE L2 -4 3309 2707 413 84 0 56 chr17 20143247 20143318 -65295162 - L1MB2 LINE L1 -4 6167 6101 664 246 117 88 chr17 20143318 20143465 -65295015 - L2 LINE L2 -606 2707 2566 1897 178 28 3 chr17 20143746 20144101 -65294379 + MLT1A1 LTR MaLR 1 364 -1 266 359 57 13 chr17 20144168 20144327 -65294153 + MIR SINE MIR 91 256 -6 1675 170 7 7 chr17 20144345 20144639 -65293841 + AluJb SINE Alu 1 294 -18 249 227 72 41 chr17 20144852 20144949 -65293531 - L2 LINE L2 -838 2476 2377 273 193 34 76 chr17 20145319 20145438 -65293042 + LTR33 LTR ERVL 377 490 -31 180 179 0 0 chr17 20145438 20145477 -65293003 - L2 LINE L2 -314 2958 2920 546 233 129 0 chr17 20146420 20146583 -65291897 - MER20 DNA MER1_type -4 215 32 393 305 115 35 chr17 20147948 20148083 -65290397 + MIR SINE MIR 12 170 -92 1672 175 126 3 chr17 20148083 20148408 -65290072 - MLT1A1 LTR MaLR 0 365 1 393 305 115 35 chr17 20148408 20148472 -65290008 + MIR SINE MIR 170 227 -35 1839 147 13 3 chr17 20148722 20149029 -65289451 - AluSx SINE Alu -2 310 1 21 0 0 0 chr17 20149676 20149697 -65288783 + AT_rich Low_complexity Low_complexity 1 21 0 1285 136 0 0 chr17 20149722 20149899 -65288581 - AluJo SINE Alu -133 179 3 279 287 0 23 chr17 20150833 20150920 -65287560 - MIR3 SINE MIR -20 188 104 225 265 38 46 chr17 20152098 20152323 -65286157 + L2 LINE L2 1887 2180 -1134 334 216 34 11 chr17 20152351 20152439 -65286041 - MER20B DNA MER1_type -54 729 640 1342 263 35 61 chr17 20152495 20153016 -65285464 - MER20B DNA MER1_type -276 507 1 1265 240 206 59 chr17 20153030 20153708 -65284772 + L2 LINE L2 2191 2968 -346 468 291 78 44 chr17 20153741 20153947 -65284533 + L2 LINE L2 3095 3307 -6 382 339 85 2 chr17 20153963 20154138 -65284342 + MIR SINE MIR 1 190 -61 1810 113 38 69 chr17 20154404 20154722 -65283758 + AluSx SINE Alu 1 308 -4 1362 132 29 0 chr17 20154866 20155070 -65283410 + MER2 DNA MER2_type 1 210 -135 6824 49 2 4 chr17 20155646 20156479 -65282001 - L1PA8 LINE L1 0 6172 5341 265 263 26 13 chr17 20156657 20156733 -65281747 - MLT1K LTR MaLR -2 586 510 302 211 0 0 chr17 20156776 20156828 -65281652 + MER5A DNA MER1_type 132 183 -6 207 255 20 0 chr17 20157668 20157719 -65280761 - MIR SINE MIR -68 140 89 991 251 46 13 chr17 20157881 20158120 -65280360 - MIR SINE MIR -14 248 2 2321 93 7 0 chr17 20159462 20159772 -65278708 + AluSx SINE Alu 1 312 0 1303 168 34 21 chr17 20160117 20160355 -65278125 - AluJo SINE Alu -30 282 42 2438 94 54 17 chr17 20161473 20161824 -65276656 + THE1B LTR MaLR 1 364 0 1918 110 53 13 chr17 20161876 20162176 -65276304 + AluSx SINE Alu 1 312 0 727 140 18 0 chr17 20162331 20162445 -65276035 + AluJo SINE Alu 2 117 -195 1535 116 17 0 chr17 20162452 20162684 -65275796 - AluSg/x SINE Alu -2 310 75 1055 113 0 0 chr17 20162685 20162827 -65275653 - AluSq/x SINE Alu -170 142 1 901 177 54 27 chr17 20162831 20163017 -65275463 + AluJo SINE Alu 106 296 -16 838 129 92 0 chr17 20163049 20163212 -65275268 + L1MB4 LINE L1 6000 6177 -3 1697 206 106 33 chr17 20163330 20163840 -65274640 - L1ME3 LINE L1 -2 6160 5614 604 232 60 7 chr17 20163974 20164125 -65274355 - L1ME3 LINE L1 -560 5602 5444 1270 160 115 52 chr17 20164850 20165138 -65273342 - AluJo SINE Alu -6 306 1 258 238 229 25 chr17 20165645 20165767 -65272713 - L2 LINE L2 0 3313 3167 2409 97 0 6 chr17 20169180 20169491 -65268989 - AluSc SINE Alu 0 309 1 2233 97 7 0 chr17 20170194 20170510 -65267970 + AluSg SINE Alu 1 310 0 332 286 43 52 chr17 20170518 20170749 -65267731 + L1MC4a LINE L1 3741 3969 -2177 2518 74 0 3 chr17 20171077 20171389 -65267091 - AluY SINE Alu 0 311 1 748 161 45 149 chr17 20171735 20171977 -65266503 + MER20 DNA MER1_type 3 219 0 329 289 190 13 chr17 20172195 20172506 -65265974 + L1MC4a LINE L1 4943 5308 -838 1242 133 41 26 chr17 20172506 20172701 -65265779 + AluJo SINE Alu 1 198 -114 543 279 164 35 chr17 20172701 20172823 -65265657 + L1MC4a LINE L1 5279 5384 -2424 1841 156 7 3 chr17 20172823 20173139 -65265341 + AluJb SINE Alu 1 317 0 543 279 164 35 chr17 20173139 20173581 -65264899 + L1MC4a LINE L1 5384 5918 -1890 2195 86 40 10 chr17 20174232 20174533 -65263947 - AluSp SINE Alu -3 310 1 815 248 140 71 chr17 20174557 20174841 -65263639 + Tigger8 DNA MER2_type 4 267 -399 1598 129 13 0 chr17 20174841 20175074 -65263406 + MER46A DNA MER2_type 1 236 0 815 248 140 71 chr17 20175074 20175108 -65263372 + Tigger8 DNA MER2_type 267 297 -369 2067 111 14 7 chr17 20175108 20175397 -65263083 + AluSx SINE Alu 2 292 -20 815 248 140 71 chr17 20175397 20175541 -65262939 + Tigger8 DNA MER2_type 297 499 -167 1545 119 165 4 chr17 20176370 20176630 -65261850 - AluJo SINE Alu 0 302 1 463 221 44 0 chr17 20176907 20177020 -65261460 - L2 LINE L2 0 3313 3196 700 298 131 13 chr17 20177091 20177464 -65261016 - L2 LINE L2 -386 2928 2512 3134 156 45 0 chr17 20177480 20178018 -65260462 - L1MB3 LINE L1 -1 6182 5621 188 289 79 0 chr17 20178584 20178660 -65259820 - MIR SINE MIR -98 164 83 595 265 30 18 chr17 20178768 20178934 -65259546 - MIR SINE MIR -5 257 90 1435 189 26 42 chr17 20179618 20179900 -65258580 - Tigger5 DNA MER2_type -1 2322 2037 2651 52 0 0 chr17 20179900 20180209 -65258271 + AluY SINE Alu 1 309 -2 1435 189 26 42 chr17 20180209 20180374 -65258106 - Tigger5 DNA MER2_type -286 2037 1 241 171 0 0 chr17 20180430 20180471 -65258009 - L1MB1 LINE L1 -28 6140 6100 1349 207 44 0 chr17 20180508 20180803 -65257677 - L1MB3 LINE L1 -153 6030 5723 216 182 0 0 chr17 20181261 20181305 -65257175 + CT-rich Low_complexity Low_complexity 3 46 0 511 188 0 0 chr17 20181390 20181475 -65257005 - U6 snRNA snRNA -1 106 22 1005 183 0 0 chr17 20182439 20182608 -65255872 - FRAM SINE Alu -7 169 1 1565 239 94 16 chr17 20182919 20183421 -65255059 - MER20B DNA MER1_type -8 775 235 225 231 19 0 chr17 20183480 20183532 -65254948 - MER115 DNA AcHobo 0 693 641 501 197 44 22 chr17 20183538 20183675 -65254805 - Zaphod DNA AcHobo -2678 1353 1214 269 174 138 56 chr17 20183696 20183892 -65254588 - Zaphod DNA AcHobo -2950 1081 870 1593 155 76 11 chr17 20183899 20184176 -65254304 - AluJo SINE Alu -17 295 1 2490 58 3 13 chr17 20184178 20184489 -65253991 - AluY SINE Alu -3 308 1 6416 215 45 71 chr17 20184491 20184727 -65253753 - L1MB3 LINE L1 -839 5307 5067 212 0 36 0 chr17 20184727 20184755 -65253725 + (TTG)n Simple_repeat Simple_repeat 2 30 0 6416 215 45 71 chr17 20184755 20184769 -65253711 - L1MB3 LINE L1 -1079 5067 5054 2134 129 0 0 chr17 20184769 20185055 -65253425 - AluSx SINE Alu -26 286 1 6416 215 45 71 chr17 20185055 20185276 -65253204 - L1MB3 LINE L1 -1092 5054 4829 1590 164 80 14 chr17 20185276 20185551 -65252929 + AluJo SINE Alu 1 293 -19 6416 215 45 71 chr17 20185551 20186188 -65252292 - L1MB3 LINE L1 -1317 4829 4177 1902 134 51 7 chr17 20186188 20186480 -65252000 - AluSx SINE Alu -7 305 1 6416 215 45 71 chr17 20186480 20186638 -65251842 - L1MB3 LINE L1 -1969 4177 4017 2371 89 3 13 chr17 20186638 20186953 -65251527 - AluSx SINE Alu 0 312 1 6416 215 45 71 chr17 20186953 20187518 -65250962 - L1MB3 LINE L1 -2129 4017 3439 216 0 0 0 chr17 20187518 20187542 -65250938 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 6416 215 45 71 chr17 20187542 20187714 -65250766 - L1MB3 LINE L1 -2707 3439 3358 2349 71 0 0 chr17 20187714 20188040 -65250440 - AluY SINE Alu 0 326 1 6416 215 45 71 chr17 20188040 20188273 -65250207 - L1MB3 LINE L1 -2788 3358 3121 1594 264 62 9 chr17 20188538 20189003 -65249477 - Zaphod DNA AcHobo -3384 647 158 596 248 12 52 chr17 20189062 20189312 -65249168 - L1MC4 LINE L1 -1342 6700 6461 852 152 0 0 chr17 20189619 20189751 -65248729 - FLAM_A SINE Alu -1 132 1 1700 156 14 14 chr17 20190468 20190750 -65247730 - AluJb SINE Alu -27 285 4 198 211 0 0 chr17 20190910 20190948 -65247532 + MIR SINE MIR 65 102 -160 2208 94 0 39 chr17 20191138 20191445 -65247035 + AluSg SINE Alu 3 297 -13 306 240 24 56 chr17 20191664 20191789 -65246691 - L1MC4 LINE L1 -1871 5937 5817 345 319 56 0 chr17 20192324 20192468 -65246012 + MIR SINE MIR 82 233 -29 2078 140 7 3 chr17 20192658 20192966 -65245514 - AluSx SINE Alu -3 309 1 1822 162 24 0 chr17 20192967 20193263 -65245217 - AluJo SINE Alu -9 303 1 3832 104 38 0 chr17 20193283 20193607 -65244873 - L1MC1 LINE L1 -67 6266 5943 452 289 26 23 chr17 20193607 20193873 -65244607 - L1PB4 LINE L1 -235 5921 5655 591 172 35 9 chr17 20194358 20194474 -65244006 - L2 LINE L2 0 3313 3195 2117 105 0 7 chr17 20194668 20194975 -65243505 - AluSg SINE Alu 0 305 1 190 292 28 28 chr17 20195804 20195876 -65242604 + L2 LINE L2 2686 2757 -557 810 253 39 9 chr17 20196535 20196764 -65241716 - L1MB7 LINE L1 0 6184 5949 2778 153 59 8 chr17 20197275 20197783 -65240697 + L1MB3 LINE L1 5599 6132 -51 1353 128 4 66 chr17 20197783 20198011 -65240469 + AluSg/x SINE Alu 74 288 -22 306 151 0 0 chr17 20198011 20198064 -65240416 + L1MB3 LINE L1 6130 6182 -1 1353 128 4 66 chr17 20198064 20198077 -65240403 + AluSg/x SINE Alu 288 300 -10 1429 146 0 5 chr17 20198190 20198403 -65240077 + AluJb SINE Alu 87 298 -14 2072 99 57 3 chr17 20198405 20198688 -65239792 + AluSx SINE Alu 3 300 -12 2160 123 0 19 chr17 20199174 20199492 -65238988 - AluJo SINE Alu 0 312 1 661 250 0 0 chr17 20199642 20199770 -65238710 - FLAM_A SINE Alu -5 128 1 272 320 29 20 chr17 20200142 20200297 -65238183 + MIR SINE MIR 3 155 -78 848 263 131 42 chr17 20200386 20200843 -65237637 - MLT1L LTR MaLR -117 498 1 5178 130 50 24 chr17 20200895 20201627 -65236853 - L1MC2 LINE L1 -2 6342 5581 2213 99 7 3 chr17 20201627 20201930 -65236550 + AluSq SINE Alu 2 305 0 5178 130 50 24 chr17 20201930 20202074 -65236406 - L1MC2 LINE L1 -763 5581 5442 1215 115 71 0 chr17 20202083 20202266 -65236214 - AluSp SINE Alu -11 302 107 2245 94 0 7 chr17 20202557 20202855 -65235625 - AluSq SINE Alu -17 296 1 341 234 9 19 chr17 20202917 20203024 -65235456 - L1MB7 LINE L1 -1994 5814 5709 199 256 0 0 chr17 20203041 20203084 -65235396 + MIR SINE MIR 13 55 -207 1662 174 48 1 chr17 20203086 20203579 -65234901 + MER68 LTR ERV1 3 552 -10 430 272 147 0 chr17 20203582 20203766 -65234714 + MIR SINE MIR 51 261 -1 2381 67 0 35 chr17 20203801 20204116 -65234364 - AluY SINE Alu -7 304 1 479 170 0 116 chr17 20204143 20204218 -65234262 - AluSp SINE Alu -78 235 176 2235 64 11 0 chr17 20204218 20204485 -65233995 + AluSp SINE Alu 28 297 -16 479 170 0 116 chr17 20204485 20204521 -65233959 - AluSp SINE Alu -137 176 137 1289 204 97 7 chr17 20204984 20205263 -65233217 + Tigger5 DNA MER2_type 1 304 -2019 436 153 28 0 chr17 20205260 20205332 -65233148 + Tigger5 DNA MER2_type 2250 2323 0 * 1776 79 0 0 chr17 20205600 20205814 -65232666 + AluSq SINE Alu 1 214 -99 1990 132 11 0 chr17 20205852 20206155 -65232325 + AluSx SINE Alu 1 306 0 1376 219 24 57 chr17 20206273 20206482 -65231998 - MLT1A2 LTR MaLR -4 370 178 2129 87 18 0 chr17 20206482 20206790 -65231690 - AluSc SINE Alu 0 309 9 1376 219 24 57 chr17 20206790 20206963 -65231517 - MLT1A2 LTR MaLR -196 178 1 189 337 134 47 chr17 20207035 20207483 -65230997 - L2 LINE L2 -369 2945 2459 2339 251 147 19 chr17 20208006 20209158 -65229322 - L2 LINE L2 -92 3221 1924 218 186 0 0 chr17 20210909 20210952 -65227528 - MIR SINE MIR -75 133 91 642 221 0 0 chr17 20211672 20211794 -65226686 - FLAM_A SINE Alu -11 122 1 521 300 45 50 chr17 20212245 20212585 -65225895 - LTR16B LTR ERVL -83 367 54 1501 160 51 74 chr17 20212585 20212779 -65225701 - AluJb SINE Alu -5 307 121 2014 135 44 0 chr17 20212779 20213075 -65225405 - AluSx SINE Alu -2 310 2 1501 160 51 74 chr17 20213075 20213192 -65225288 - AluJb SINE Alu -191 121 3 521 300 45 50 chr17 20213192 20213237 -65225243 - LTR16B LTR ERVL -396 54 10 230 348 0 0 chr17 20213676 20213745 -65224735 + MER91A DNA MER1_type 1 69 -127 872 249 120 9 chr17 20213966 20214300 -65224180 - MLT1J1 LTR MaLR 0 446 76 282 216 27 63 chr17 20214560 20214671 -65223809 - HAL1 LINE L1 -152 2355 2249 1696 93 9 0 chr17 20214837 20215053 -65223427 + AluSg/x SINE Alu 78 295 -17 2350 106 0 0 chr17 20215615 20215926 -65222554 - AluSx SINE Alu -1 311 1 2294 97 0 3 chr17 20215967 20216277 -65222203 - AluY SINE Alu -2 309 1 449 287 64 0 chr17 20216279 20216436 -65222044 + MIR SINE MIR 94 260 -2 2314 97 3 3 chr17 20216577 20216876 -65221604 + AluSp SINE Alu 1 299 -14 21 36 0 0 chr17 20217311 20217339 -65221141 + AT_rich Low_complexity Low_complexity 1 28 0 1891 151 0 7 chr17 20217396 20217694 -65220786 - AluJo SINE Alu -16 296 1 1359 139 90 45 chr17 20218001 20218289 -65220191 - AluJo SINE Alu -11 301 1 40 21 0 0 chr17 20218832 20218879 -65219601 + AT_rich Low_complexity Low_complexity 1 47 0 6529 92 25 0 chr17 20218885 20219825 -65218655 - L1PA10 LINE L1 -12 6156 5202 308 301 96 6 chr17 20219961 20220117 -65218363 + L1M4 LINE L1 2381 2550 -3596 955 151 70 38 chr17 20220666 20220852 -65217628 + AluJo SINE Alu 1 192 -120 320 117 67 17 chr17 20220945 20221065 -65217415 + (TA)n Simple_repeat Simple_repeat 1 126 0 2168 111 7 3 chr17 20221228 20221526 -65216954 + AluSp SINE Alu 1 299 -14 293 194 31 101 chr17 20221768 20221897 -65216583 - MER113 DNA MER1_type? -400 121 2 299 308 108 32 chr17 20221972 20222381 -65216099 + L1M4 LINE L1 3656 4095 -2051 223 305 11 11 chr17 20222572 20222667 -65215813 + (TATATG)n Simple_repeat Simple_repeat 5 99 0 2001 146 0 0 chr17 20222705 20222993 -65215487 - AluJb SINE Alu -13 299 12 192 333 9 29 chr17 20223395 20223500 -65214980 + MIR3 SINE MIR 105 207 -1 762 181 0 0 chr17 20223507 20223634 -65214846 - FLAM_C SINE Alu -6 127 1 1351 160 0 9 chr17 20225388 20225601 -65212879 - AluJo SINE Alu -21 291 81 221 250 31 52 chr17 20226000 20226096 -65212384 + L2 LINE L2 2885 2978 -335 258 279 70 31 chr17 20226117 20226246 -65212234 - MER94 DNA DNA 0 134 1 221 186 23 0 chr17 20226255 20226298 -65212182 + L2 LINE L2 3008 3051 -262 1986 140 13 0 chr17 20227760 20228060 -65210420 - AluSq SINE Alu -9 304 1 34 0 0 0 chr17 20228137 20228171 -65210309 + AT_rich Low_complexity Low_complexity 1 34 0 457 264 77 5 chr17 20228219 20228427 -65210053 - LTR16A LTR ERVL -14 436 214 247 134 60 75 chr17 20229252 20229319 -65209161 - L1MEd LINE L1 -4973 1146 1081 255 290 114 8 chr17 20229900 20230031 -65208449 + MIR SINE MIR 32 176 -86 2194 178 101 13 chr17 20230306 20230762 -65207718 - MLT1D LTR MaLR 0 505 10 380 355 73 17 chr17 20230849 20231083 -65207397 - L2 LINE L2 -182 3090 2844 644 262 151 0 chr17 20231194 20231518 -65206962 - L1ME4a LINE L1 -1 6120 5748 2344 91 0 3 chr17 20231533 20231840 -65206640 - AluSg SINE Alu -4 306 1 1047 149 0 23 chr17 20231843 20232017 -65206463 - AluJb SINE Alu -7 305 136 230 296 90 37 chr17 20232502 20232691 -65205789 + HAL1 LINE L1 1155 1353 -1154 900 295 58 66 chr17 20232887 20233402 -65205078 - LTR67 LTR ERVL -2 555 45 254 233 8 142 chr17 20234389 20234509 -65203971 - MER102b DNA MER1_type -6 335 232 303 244 24 49 chr17 20234515 20234597 -65203883 - MER102b DNA MER1_type -261 80 1 327 280 125 16 chr17 20234897 20235208 -65203272 + L1ME4a LINE L1 2880 3224 -2922 1672 203 0 9 chr17 20235932 20236247 -65202233 - AluJb SINE Alu 0 312 1 529 207 147 7 chr17 20236662 20236812 -65201668 - MLT1J LTR MaLR -336 175 5 387 285 112 39 chr17 20236943 20237332 -65201148 + L1ME4a LINE L1 5365 5790 -331 1871 172 20 35 chr17 20237332 20237680 -65200800 + MER2 DNA MER2_type 1 343 -1 387 285 112 39 chr17 20237680 20237719 -65200761 + L1ME4a LINE L1 5790 5825 -296 2162 105 0 35 chr17 20237722 20238035 -65200445 + AluSx SINE Alu 3 304 -8 663 247 132 11 chr17 20238343 20238533 -65199947 + MIR SINE MIR 8 220 -42 23 54 0 0 chr17 20238573 20238610 -65199870 + AT_rich Low_complexity Low_complexity 1 37 0 691 265 137 13 chr17 20238995 20239326 -65199154 + MLT1G LTR MaLR 5 354 -241 364 270 45 0 chr17 20239366 20239477 -65199003 + MLT1G LTR MaLR 428 543 -12 2319 109 0 0 chr17 20239658 20239969 -65198511 - AluSx SINE Alu -1 311 1 1142 144 104 15 chr17 20240008 20240209 -65198271 - Tigger1 DNA MER2_type 0 2418 2200 842 169 22 0 chr17 20240205 20240341 -65198139 - Tigger1 DNA MER2_type -2279 139 1 * 1638 170 0 37 chr17 20240411 20240705 -65197775 - AluJb SINE Alu -29 283 1 1236 132 96 23 chr17 20240817 20241037 -65197443 - MER46A DNA MER2_type 0 236 1 562 284 118 30 chr17 20241174 20241547 -65196933 + MLT1K LTR MaLR 177 582 -6 1119 273 71 47 chr17 20241556 20242062 -65196418 + L3 LINE CR1 1059 1576 -1 2225 88 3 59 chr17 20242088 20242408 -65196072 - AluSx SINE Alu -10 302 1 327 199 96 83 chr17 20242431 20242587 -65195893 + MIR SINE MIR 84 241 -21 258 224 37 127 chr17 20244154 20244288 -65194192 - HAL1 LINE L1 -8 2499 2378 1078 176 126 21 chr17 20244313 20244551 -65193929 - L1MC1 LINE L1 -5 6328 6066 560 131 12 0 chr17 20244553 20244637 -65193843 - FLAM SINE Alu -18 125 41 3392 126 54 118 chr17 20244689 20245328 -65193152 - L1MC1 LINE L1 -317 6016 5338 2109 90 12 50 chr17 20245328 20245649 -65192831 - L1PA7 LINE L1 0 6154 5846 3392 126 54 118 chr17 20245649 20245772 -65192708 - L1MC1 LINE L1 -995 5338 5313 1659 156 3 117 chr17 20245772 20246106 -65192374 - AluJb SINE Alu -6 296 1 3392 126 54 118 chr17 20246106 20246232 -65192248 - L1MC1 LINE L1 -1020 5313 5181 4577 73 15 0 chr17 20246702 20247248 -65191232 - MER41A LTR ERV1 0 554 1 12613 100 32 10 chr17 20247248 20248334 -65190146 - MER41A-int LTR ERV1 -2 5944 4883 2306 90 7 3 chr17 20248334 20248635 -65189845 - AluSc SINE Alu -7 302 1 12613 100 32 10 chr17 20248635 20249388 -65189092 - MER41A-int LTR ERV1 -1063 4883 2434 1419 126 0 5 chr17 20249392 20249591 -65188889 - AluSg/x SINE Alu -15 297 100 5263 135 63 55 chr17 20249591 20251000 -65187480 - MER57-int LTR ERV1 -2942 4874 3355 317 96 58 0 chr17 20250996 20251048 -65187432 - MER57-int LTR ERV1 -3725 2221 2167 * 855 91 144 9 chr17 20251024 20251179 -65187301 - MER57-int LTR ERV1 -3929 2017 1505 * 4478 150 91 15 chr17 20251166 20251972 -65186508 - MER57-int LTR ERV1 -4171 1775 909 3506 128 26 1 chr17 20251939 20252534 -65185946 - MER57-int LTR ERV1 -5263 683 226 * 1009 240 156 6 chr17 20252550 20252871 -65185609 - HAL1 LINE L1 -612 1895 1527 * 1479 143 56 28 chr17 20252856 20252912 -65185568 - L1M2 LINE L1 -628 5663 5610 2263 120 0 0 chr17 20252912 20253212 -65185268 - AluSx SINE Alu -6 306 7 1587 137 0 36 chr17 20253215 20253493 -65184987 - AluJo SINE Alu -1 311 44 1479 143 56 28 chr17 20253493 20253623 -65184857 - L1M2 LINE L1 -682 5609 5460 1925 88 0 15 chr17 20253623 20253885 -65184595 - AluSc SINE Alu -14 295 38 1479 143 56 28 chr17 20253885 20253980 -65184500 - L1M2 LINE L1 -831 5460 5369 2038 104 6 67 chr17 20255010 20255338 -65183142 + AluSq SINE Alu 1 308 -5 4029 161 59 16 chr17 20255630 20256374 -65182106 + Tigger2 DNA MER2_type 3 778 -1940 1665 136 24 0 chr17 20256405 20256656 -65181824 + Tigger2 DNA MER2_type 2461 2717 -1 184 245 57 19 chr17 20257192 20257245 -65181235 - MER5B DNA MER1_type -55 123 69 440 339 38 11 chr17 20257577 20257760 -65180720 - MLT1L LTR MaLR -2 613 426 322 284 27 47 chr17 20257851 20257999 -65180481 - MLT1L LTR MaLR -357 258 114 278 241 9 102 chr17 20260041 20260149 -65178331 - L2 LINE L2 -188 3084 2987 230 162 0 0 chr17 20260149 20260186 -65178294 - MLT1L LTR MaLR -3 612 576 753 278 130 44 chr17 20260188 20260710 -65177770 - L1ME4a LINE L1 -83 6038 5472 489 231 96 13 chr17 20261425 20261581 -65176899 - L1ME4a LINE L1 -1 6120 5952 333 275 140 31 chr17 20261668 20261861 -65176619 - L1ME4a LINE L1 -2932 3214 3001 280 314 44 15 chr17 20262476 20262613 -65175867 - L1M4 LINE L1 -2023 4123 3983 970 159 13 6 chr17 20262641 20262798 -65175682 - FRAM SINE Alu -20 156 1 369 189 11 33 chr17 20264398 20264488 -65173992 - MLT1L LTR MaLR -501 114 27 2025 125 107 24 chr17 20266167 20266503 -65171977 - THE1B LTR MaLR 0 364 1 183 283 0 50 chr17 20266566 20266626 -65171854 + L2 LINE L2 3216 3272 0 29 60 0 0 chr17 20266664 20266714 -65171766 + AT_rich Low_complexity Low_complexity 1 50 0 1653 158 40 30 chr17 20266921 20267224 -65171256 - AluJo SINE Alu -4 308 3 1087 199 92 8 chr17 20267714 20267965 -65170515 - L1MB7 LINE L1 0 6184 5913 793 189 5 32 chr17 20268016 20268201 -65170279 - L1MB7 LINE L1 -864 5282 5103 2143 112 7 7 chr17 20268335 20268639 -65169841 - AluSx SINE Alu -8 304 1 493 171 28 185 chr17 20270119 20270330 -65168150 - LTR34 LTR ERV1 -521 178 1 705 122 75 0 chr17 20270731 20270838 -65167642 + FLAM_A SINE Alu 21 135 -7 1290 185 66 28 chr17 20271599 20271886 -65166594 + AluJo SINE Alu 1 298 -14 332 251 217 49 chr17 20272039 20272242 -65166238 - MIR SINE MIR -11 251 15 262 331 68 8 chr17 20272256 20272389 -65166091 + MER112 DNA MER1_type 2 142 -118 210 258 45 0 chr17 20272406 20272472 -65166008 + CT-rich Low_complexity Low_complexity 5 73 0 13770 155 28 25 chr17 20272474 20275883 -65162597 - L1MA3 LINE L1 0 7724 4177 2152 109 3 3 chr17 20275883 20276176 -65162304 + AluSx SINE Alu 1 293 -19 13770 155 28 25 chr17 20276176 20276375 -65162105 - L1MA3 LINE L1 -3547 4177 3980 * 17569 152 75 11 chr17 20276354 20277225 -65161255 - L1MA3 LINE L1 -4322 3243 2429 2429 71 3 0 chr17 20277225 20277519 -65160961 + AluSg SINE Alu 1 295 -15 17569 152 75 11 chr17 20277519 20279682 -65158798 - L1MA3 LINE L1 -5136 2429 16 526 272 26 0 chr17 20279757 20279871 -65158609 - L2 LINE L2 0 3313 3197 419 141 0 0 chr17 20281101 20281172 -65157308 - L1PA16 LINE L1 -16 6150 6080 2013 69 4 4 chr17 20281465 20281712 -65156768 + AluSq SINE Alu 2 248 -65 805 182 54 0 chr17 20282026 20282174 -65156306 - FRAM SINE Alu -11 165 10 1770 251 61 5 chr17 20282777 20283204 -65155276 - MER82 DNA MER2_type 0 653 203 1757 163 0 43 chr17 20283213 20283538 -65154942 + AluJb SINE Alu 1 311 -1 592 252 52 0 chr17 20283984 20284119 -65154361 - MER82 DNA MER2_type -510 143 2 219 293 20 30 chr17 20284713 20284812 -65153668 + MER5B DNA MER1_type 64 161 -17 337 329 0 46 chr17 20284983 20285135 -65153345 - MER5B DNA MER1_type -30 148 4 714 183 16 8 chr17 20287365 20287491 -65150989 - FLAM_A SINE Alu -4 138 12 21 0 0 0 chr17 20290487 20290508 -65147972 + AT_rich Low_complexity Low_complexity 1 21 0 2413 92 7 0 chr17 20291104 20291442 -65147038 - AluSq SINE Alu 0 313 3 1911 145 3 0 chr17 20291591 20291873 -65146607 - AluSq SINE Alu -30 283 1 465 326 100 27 chr17 20293246 20293713 -65144767 - L1ME4a LINE L1 -215 5906 5389 1922 140 0 69 chr17 20293713 20294048 -65144432 - AluJb SINE Alu 0 312 1 465 326 100 27 chr17 20294048 20294191 -65144289 - L1ME4a LINE L1 -732 5389 5258 23 33 0 0 chr17 20294642 20294672 -65143808 + AT_rich Low_complexity Low_complexity 1 30 0 181 267 17 17 chr17 20295672 20295732 -65142748 - L2 LINE L2 -332 2981 2922 328 281 274 0 chr17 20296544 20296697 -65141783 + MIR SINE MIR 38 232 -30 223 154 0 0 chr17 20297380 20297419 -65141061 + (CA)n Simple_repeat Simple_repeat 1 39 0 1916 130 0 39 chr17 20297766 20298073 -65140407 + AluSx SINE Alu 1 295 -17 30 0 0 0 chr17 20298228 20298258 -65140222 + AT_rich Low_complexity Low_complexity 1 30 0 232 298 0 24 chr17 20301161 20301245 -65137235 - L1ME4a LINE L1 -104 6017 5936 409 244 15 89 chr17 20301315 20301450 -65137030 + L2 LINE L2 3189 3313 0 238 194 194 65 chr17 20301647 20301817 -65136663 - LTR67 LTR ERVL -8 549 358 300 265 173 49 chr17 20302395 20302580 -65135900 - L1ME4a LINE L1 -2336 5472 5265 2070 129 0 0 chr17 20302969 20303273 -65135207 + AluSg SINE Alu 1 304 0 832 263 90 73 chr17 20303274 20304162 -65134318 + L1MC/D LINE L1 817 1683 -4532 1243 268 83 39 chr17 20304164 20304776 -65133704 + L1MC/D LINE L1 3267 3965 -2250 1956 145 14 7 chr17 20304776 20305073 -65133407 + AluSx SINE Alu 1 299 -13 1243 268 83 39 chr17 20305073 20305305 -65133175 + L1MC/D LINE L1 3965 4185 -2030 313 239 130 0 chr17 20305465 20305557 -65132923 + L1MC/D LINE L1 5747 5850 -2027 706 232 49 22 chr17 20305562 20305747 -65132733 - MIR SINE MIR -3 259 70 4363 166 23 24 chr17 20306003 20306093 -65132387 - L1MB1 LINE L1 -13 6155 6066 1268 104 74 15 chr17 20306093 20306295 -65132185 - L1PA16 LINE L1 0 6166 5953 4363 166 23 24 chr17 20306295 20306994 -65131486 - L1MB1 LINE L1 -102 6066 5367 899 144 0 0 chr17 20307665 20307797 -65130683 - FLAM_C SINE Alu 0 133 2 378 0 0 0 chr17 20307966 20308008 -65130472 + (TG)n Simple_repeat Simple_repeat 2 43 0 523 298 84 0 chr17 20308153 20308331 -65130149 + MIR SINE MIR 49 241 -21 264 280 91 38 chr17 20308768 20308900 -65129580 - MIR3 SINE MIR -33 175 37 380 103 0 0 chr17 20309261 20309319 -65129161 - L1MB2 LINE L1 -7 6164 6107 1632 174 10 24 chr17 20309409 20309703 -65128777 - AluJo SINE Alu -22 290 1 2490 68 0 0 chr17 20309712 20310008 -65128472 - AluY SINE Alu -15 296 1 275 256 149 14 chr17 20310409 20310550 -65127930 + MIR3 SINE MIR 43 205 -3 644 211 23 23 chr17 20310563 20310696 -65127784 + FLAM_A SINE Alu 1 133 0 501 235 195 0 chr17 20310970 20311119 -65127361 + MER45A DNA AcHobo 1 178 0 1709 185 3 19 chr17 20313334 20313642 -65124838 - AluJo SINE Alu -9 303 1 418 315 54 7 chr17 20314256 20314405 -65124075 + MER91A DNA MER1_type 1 156 -40 3435 137 37 54 chr17 20314415 20315044 -65123436 - LTR35 LTR ERV1 0 618 1 2582 44 0 0 chr17 20315061 20315354 -65123126 + AluY SINE Alu 10 302 -9 2204 255 45 58 chr17 20315604 20316404 -65122076 - L1ME3A LINE L1 -2 6168 5379 464 232 0 0 chr17 20316720 20316819 -65121661 + FRAM SINE Alu 26 124 -52 1874 50 0 0 chr17 20317136 20317355 -65121125 + L1PA5 LINE L1 5928 6146 -8 198 0 0 0 chr17 20317717 20317739 -65120741 + (TG)n Simple_repeat Simple_repeat 1 22 0 1131 166 15 0 chr17 20318066 20318265 -65120215 - L1PA16 LINE L1 -3 6163 5962 2192 96 0 0 chr17 20318291 20318582 -65119898 - AluSx SINE Alu 0 312 22 4144 167 44 8 chr17 20318650 20320084 -65118396 - L1PA16 LINE L1 -204 5962 4479 2268 59 0 3 chr17 20320133 20320421 -65118059 + AluY SINE Alu 1 287 -24 609 259 97 22 chr17 20320431 20320659 -65117821 - L2 LINE L2 -50 3263 3019 538 206 227 16 chr17 20321337 20321531 -65116949 + MLT1E2 LTR MaLR 137 371 -255 1388 170 112 4 chr17 20322988 20323265 -65115215 + MER68 LTR ERV1 1 307 -255 1096 92 13 2 chr17 20323265 20323504 -65114976 - AluSp SINE Alu -21 292 2 1162 184 29 21 chr17 20323505 20323744 -65114736 + MER68 LTR ERV1 297 537 -25 1793 186 8 32 chr17 20323748 20324124 -65114356 + L1MB5 LINE L1 5802 6168 -6 1368 176 3 88 chr17 20324149 20324468 -65114012 + AluJo SINE Alu 4 295 -17 320 288 102 33 chr17 20324541 20324902 -65113578 - L1ME LINE L1 -461 5660 5270 1024 261 144 35 chr17 20324916 20325521 -65112959 - HAL1 LINE L1 0 2507 1837 2240 233 139 59 chr17 20325535 20326203 -65112277 - HAL1 LINE L1 -714 1793 1180 2336 151 8 8 chr17 20326203 20326601 -65111879 - L1MB2 LINE L1 -1 6170 5773 2240 233 139 59 chr17 20326601 20327033 -65111447 - HAL1 LINE L1 -1327 1180 587 1751 125 68 0 chr17 20327033 20327312 -65111168 + AluSx SINE Alu 1 298 -14 2240 233 139 59 chr17 20327312 20327404 -65111076 - HAL1 LINE L1 -1920 587 504 1280 253 24 24 chr17 20327428 20327807 -65110673 - HAL1 LINE L1 -2114 393 15 355 314 82 44 chr17 20328282 20328327 -65110153 - L1ME LINE L1 -1908 4238 4196 1719 130 92 3 chr17 20328327 20328611 -65109869 - AluSc SINE Alu 0 309 1 355 314 82 44 chr17 20328611 20328724 -65109756 - L1ME LINE L1 -1950 4196 4074 41 0 0 0 chr17 20328746 20328787 -65109693 + AT_rich Low_complexity Low_complexity 1 41 0 466 355 22 33 chr17 20328787 20329060 -65109420 - L1ME LINE L1 -2100 4046 3777 1483 182 3 38 chr17 20329935 20330253 -65108227 - AluJo SINE Alu -5 307 1 1492 203 37 23 chr17 20331385 20331734 -65106746 - L1MB3 LINE L1 0 6183 5830 821 228 0 0 chr17 20332386 20332531 -65105949 + FRAM SINE Alu 1 142 -34 189 0 0 0 chr17 20332531 20332552 -65105928 + (TC)n Simple_repeat Simple_repeat 2 22 0 21 0 0 0 chr17 20332649 20332670 -65105810 + AT_rich Low_complexity Low_complexity 1 21 0 2402 80 3 0 chr17 20333141 20333453 -65105027 - AluSp SINE Alu 0 313 1 302 294 12 0 chr17 20333724 20333809 -65104671 + L1MB3 LINE L1 5830 5915 -268 226 222 19 0 chr17 20333844 20333898 -65104582 + L1MC/D LINE L1 5541 5595 -526 292 243 0 0 chr17 20333909 20333987 -65104493 + L1MC/D LINE L1 5670 5747 -374 589 311 119 4 chr17 20334057 20334292 -65104188 - MIR SINE MIR 0 262 1 986 186 72 0 chr17 20334404 20334598 -65103882 + MER3 DNA MER1_type 1 208 -1 356 220 22 44 chr17 20334734 20334825 -65103655 - MIR3 SINE MIR -48 160 72 607 207 44 58 chr17 20334930 20335118 -65103362 + MER6 DNA MER2_type -52 864 -1 378 261 7 29 chr17 20336292 20336430 -65102050 + L1M4 LINE L1 4565 4699 -1447 1779 150 0 29 chr17 20336724 20337037 -65101443 + AluJo SINE Alu 1 304 -8 358 224 140 14 chr17 20337268 20337411 -65101069 - L1MB3 LINE L1 -2331 5477 5317 1642 192 0 7 chr17 20337418 20337720 -65100760 - AluJb SINE Alu -12 300 1 310 291 22 93 chr17 20337781 20337963 -65100517 - L1MB3 LINE L1 -985 5161 4993 338 357 54 9 chr17 20337971 20338195 -65100285 + L1MEc LINE L1 149 382 -6014 250 138 35 17 chr17 20339574 20339632 -65098848 + CT-rich Low_complexity Low_complexity 4 62 0 1623 175 30 3 chr17 20339635 20339932 -65098548 - AluJo SINE Alu -1 311 7 2774 16 0 0 chr17 20340967 20341285 -65097195 + AluYb8 SINE Alu 1 318 0 3764 88 46 12 chr17 20341622 20342189 -65096291 - L1PA11 LINE L1 -1 6173 5588 1876 94 0 109 chr17 20342189 20342472 -65096008 + L1PA11 LINE L1 5268 5580 -585 2674 71 3 38 chr17 20342472 20342600 -65095880 - THE1A LTR MaLR 0 355 224 2274 83 0 19 chr17 20342600 20342914 -65095566 - AluSg SINE Alu -2 308 1 2674 71 3 38 chr17 20342914 20343152 -65095328 - THE1A LTR MaLR -131 224 2 1861 123 0 14 chr17 20343152 20343437 -65095043 - AluSx SINE Alu -31 281 1 1876 94 0 109 chr17 20343437 20343502 -65094978 + L1P4 LINE L1 5578 5579 -586 352 259 0 0 chr17 20344088 20344173 -65094307 + U6 snRNA snRNA 1 85 -22 769 214 65 0 chr17 20344176 20344330 -65094150 - AluJo/FRAM SINE Alu -15 297 134 1666 149 0 24 chr17 20344330 20344619 -65093861 - AluSx SINE Alu -1 311 30 264 304 252 0 chr17 20345246 20345361 -65093119 + MIR SINE MIR 107 250 -12 1768 158 10 0 chr17 20345384 20345675 -65092805 - AluSx SINE Alu -18 294 1 1561 129 8 23 chr17 20346156 20346419 -65092061 - AluSx SINE Alu -11 301 43 1987 128 30 0 chr17 20347816 20348113 -65090367 - AluSq SINE Alu -7 306 1 377 250 0 18 chr17 20348394 20348562 -65089918 + (ATGGTG)n Simple_repeat Simple_repeat 5 169 0 270 256 0 56 chr17 20348565 20348655 -65089825 + MER103 DNA DNA 4 88 -78 216 0 0 0 chr17 20348846 20348870 -65089610 + (TTA)n Simple_repeat Simple_repeat 3 26 0 8641 53 4 1 chr17 20348870 20350704 -65087776 - L1PA5 LINE L1 -18 6136 4299 396 258 61 8 chr17 20351187 20351319 -65087161 - MER103 DNA DNA 0 166 28 844 214 92 5 chr17 20351377 20351583 -65086897 - MER58A DNA MER1_type 0 224 1 1975 99 75 0 chr17 20351901 20352183 -65086297 + AluSx SINE Alu 1 303 -9 450 296 112 0 chr17 20352441 20352610 -65085870 - L2 LINE L2 -733 2581 2394 2018 186 32 22 chr17 20352723 20352753 -65085727 - MLT2D LTR ERVL -7 407 379 252 0 0 0 chr17 20352753 20352781 -65085699 + (GA)n Simple_repeat Simple_repeat 2 29 0 231 36 0 0 chr17 20352780 20352808 -65085672 + (TG)n Simple_repeat Simple_repeat 2 29 0 * 2018 186 32 22 chr17 20352781 20352808 -65085672 - MLT2D LTR ERVL -35 379 354 180 0 0 0 chr17 20352808 20352828 -65085652 + (GA)n Simple_repeat Simple_repeat 2 21 0 2018 186 32 22 chr17 20352828 20353103 -65085377 - MLT2D LTR ERVL -60 354 94 1700 157 26 32 chr17 20353103 20353416 -65085064 + AluJo SINE Alu 1 311 -1 2018 186 32 22 chr17 20353416 20353511 -65084969 - MLT2D LTR ERVL -320 94 1 511 250 54 81 chr17 20353593 20353746 -65084734 - L2 LINE L2 -941 2373 2217 751 197 104 6 chr17 20353746 20353929 -65084551 + MER3 DNA MER1_type 5 205 -4 511 250 54 81 chr17 20353929 20354107 -65084373 - L2 LINE L2 -1097 2217 2051 22 0 0 0 chr17 20355240 20355262 -65083218 + AT_rich Low_complexity Low_complexity 1 22 0 1910 153 0 3 chr17 20355531 20355838 -65082642 - AluSx SINE Alu -6 306 1 406 162 0 15 chr17 20356465 20356533 -65081947 - FLAM_A SINE Alu -65 67 1 566 179 89 8 chr17 20356606 20356729 -65081751 + FLAM_A SINE Alu 1 133 0 281 256 12 24 chr17 20356905 20356987 -65081493 + L1ME LINE L1 5524 5604 -517 1936 134 0 0 chr17 20357502 20357794 -65080686 + AluSx SINE Alu 1 292 -20 1609 170 0 58 chr17 20357821 20358133 -65080347 + AluSx SINE Alu 1 294 -18 23 54 0 0 chr17 20358182 20358219 -65080261 + AT_rich Low_complexity Low_complexity 1 37 0 508 311 60 0 chr17 20358335 20358502 -65079978 + HAL1 LINE L1 1517 1693 -814 325 258 133 13 chr17 20359296 20359521 -65078959 + HAL1 LINE L1 2248 2499 -8 398 282 47 41 chr17 20360125 20360295 -65078185 + L1ME LINE L1 6 176 -5943 334 268 102 44 chr17 20360660 20361022 -65077458 + L1ME LINE L1 700 1082 -5037 498 261 116 78 chr17 20361023 20361407 -65077073 - MLT1L LTR MaLR -6 609 108 418 215 62 84 chr17 20361503 20361768 -65076712 + L1ME LINE L1 1076 1372 -4903 347 269 45 0 chr17 20361780 20361936 -65076544 + L1ME LINE L1 5272 5434 -713 2291 92 0 3 chr17 20361937 20362243 -65076237 + AluSq SINE Alu 1 305 -8 4485 113 20 47 chr17 20363221 20363642 -65074838 - L1PA16 LINE L1 0 6166 5772 2178 106 3 13 chr17 20363642 20363953 -65074527 - AluSq SINE Alu -5 308 1 4485 113 20 47 chr17 20363953 20364274 -65074206 - L1PA16 LINE L1 -394 5772 5444 239 352 267 0 chr17 20364700 20364876 -65073604 - MIR SINE MIR -26 236 14 3081 211 90 39 chr17 20364898 20365209 -65073271 - L1M4 LINE L1 -1704 4442 4148 1978 113 0 10 chr17 20365209 20365502 -65072978 - AluSx SINE Alu 0 312 23 3081 211 90 39 chr17 20365502 20366105 -65072375 - L1M4 LINE L1 -1998 4148 3482 998 167 0 0 chr17 20368322 20368478 -65070002 + FRAM SINE Alu 1 153 -23 234 296 81 52 chr17 20369648 20369820 -65068660 + MER5B DNA MER1_type 2 178 0 2077 129 0 10 chr17 20370190 20370501 -65067979 - AluSq SINE Alu -5 308 1 533 100 0 11 chr17 20370516 20370606 -65067874 - Alu SINE Alu 0 311 223 1752 170 0 41 chr17 20370964 20371091 -65067389 + AluJo SINE Alu 1 132 -180 2025 134 23 10 chr17 20371091 20371390 -65067090 - AluSx SINE Alu -9 303 1 1752 170 0 41 chr17 20371390 20371579 -65066901 + AluJo SINE Alu 132 304 -8 21 71 0 0 chr17 20372823 20372865 -65065615 + AT_rich Low_complexity Low_complexity 1 42 0 2378 93 0 10 chr17 20373229 20373541 -65064939 - AluSc SINE Alu 0 309 1 1366 141 16 21 chr17 20373556 20373798 -65064682 + LOR1b LTR ERV1 221 461 0 335 115 33 0 chr17 20373880 20373941 -65064539 + CT-rich Low_complexity Low_complexity 4 66 0 2375 88 0 0 chr17 20373944 20374240 -65064240 - AluSx SINE Alu -16 296 1 340 323 73 106 chr17 20374337 20375105 -65063375 - L1M2 LINE L1 -5450 1399 657 2384 31 42 0 chr17 20375749 20376037 -65062443 + AluY SINE Alu 1 300 -11 885 64 0 0 chr17 20376115 20376225 -65062255 + AluSg SINE Alu 1 110 -200 2249 82 0 10 chr17 20376527 20376831 -65061649 + AluY SINE Alu 1 301 -10 553 136 0 64 chr17 20376831 20376941 -65061539 + U6 snRNA snRNA 4 106 -1 227 325 83 38 chr17 20377603 20377760 -65060720 - MIR SINE MIR -41 221 58 2393 61 7 3 chr17 20378351 20378646 -65059834 - AluY SINE Alu -15 296 1 21 0 0 0 chr17 20378735 20378756 -65059724 + AT_rich Low_complexity Low_complexity 1 21 0 2199 167 21 28 chr17 20378786 20379222 -65059258 - Tigger2a DNA MER2_type 0 434 2 1680 169 34 10 chr17 20379327 20379623 -65058857 + AluJo SINE Alu 1 303 -9 1841 154 3 39 chr17 20380340 20380652 -65057828 + AluJo SINE Alu 1 301 -11 2088 118 3 0 chr17 20381058 20381347 -65057133 - AluSx SINE Alu -22 290 1 2195 115 3 19 chr17 20381383 20381697 -65056783 + AluSc SINE Alu 1 309 0 580 305 125 9 chr17 20381879 20382207 -65056273 - MLT1L LTR MaLR -245 370 5 633 259 155 0 chr17 20382280 20382473 -65056007 - MER58A DNA MER1_type 0 224 2 366 309 130 57 chr17 20382841 20383388 -65055092 - L2 LINE L2 -787 2527 1941 2345 68 0 13 chr17 20384395 20384706 -65053774 - AluY SINE Alu -4 307 1 523 269 9 0 chr17 20384722 20384830 -65053650 - FAM SINE Alu -76 109 1 2708 172 17 50 chr17 20385191 20385772 -65052708 - MER68 LTR ERV1 0 562 1 2073 167 19 19 chr17 20386357 20386771 -65051709 - L1MC1 LINE L1 -14 6319 5906 604 140 0 0 chr17 20387749 20387842 -65050638 - Tigger7 DNA MER2_type 0 2487 2395 22 0 0 0 chr17 20388556 20388578 -65049902 + AT_rich Low_complexity Low_complexity 1 22 0 348 221 0 0 chr17 20388579 20388674 -65049806 - Charlie1 DNA MER1_type -45 2716 2622 2460 43 3 16 chr17 20388683 20388986 -65049494 + AluY SINE Alu 1 299 -12 23 54 0 0 chr17 20389227 20389264 -65049216 + AT_rich Low_complexity Low_complexity 1 37 0 2100 116 0 10 chr17 20390325 20390619 -65047861 + AluSg SINE Alu 16 306 -4 224 200 22 0 chr17 20391191 20391236 -65047244 + L2 LINE L2 3263 3308 -5 28 29 0 0 chr17 20391456 20391491 -65046989 + AT_rich Low_complexity Low_complexity 1 35 0 21 36 0 0 chr17 20392183 20392211 -65046269 + AT_rich Low_complexity Low_complexity 1 28 0 2181 137 0 12 chr17 20394576 20394898 -65043582 + 7SLRNA srpRNA srpRNA 3 320 0 189 74 0 0 chr17 20395647 20395674 -65042806 + (A)n Simple_repeat Simple_repeat 1 27 0 27 0 0 0 chr17 20395994 20396021 -65042459 + AT_rich Low_complexity Low_complexity 1 27 0 2231 129 7 0 chr17 20396360 20396670 -65041810 + AluSp SINE Alu 1 312 -1 446 277 105 49 chr17 20396762 20397087 -65041393 + L1MC/D LINE L1 5387 5659 -462 302 324 73 29 chr17 20397160 20397296 -65041184 + L1MC/D LINE L1 5679 5820 -1988 295 261 0 0 chr17 20397645 20397710 -65040770 - MER58A DNA MER1_type 0 224 160 328 315 11 0 chr17 20397716 20397805 -65040675 - MER58A DNA MER1_type -17 90 1 2973 289 99 29 chr17 20398377 20399793 -65038687 + L2 LINE L2 1778 3307 -6 186 43 0 0 chr17 20400757 20400780 -65037700 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2438 41 41 0 chr17 20401347 20401641 -65036839 - AluY SINE Alu -5 306 1 2241 96 17 0 chr17 20401646 20401947 -65036533 - AluSc SINE Alu -3 306 1 451 283 179 31 chr17 20402707 20402930 -65035550 - L2 LINE L2 -1407 1907 1652 2302 123 0 0 chr17 20403390 20403700 -65034780 - AluSg SINE Alu 0 310 1 21 0 0 0 chr17 20403707 20403728 -65034752 + AT_rich Low_complexity Low_complexity 1 21 0 183 162 0 0 chr17 20403835 20403872 -65034608 + (TGAA)n Simple_repeat Simple_repeat 1 37 0 736 255 32 37 chr17 20404086 20404302 -65034178 + MIR SINE MIR 23 237 -25 231 303 36 85 chr17 20405470 20405635 -65032845 + L2 LINE L2 2586 2742 -572 359 241 149 14 chr17 20405757 20405898 -65032582 - L1MA10 LINE L1 -9 6325 6166 855 226 4 32 chr17 20405905 20406153 -65032327 - L1MC/D LINE L1 -2192 5662 5422 624 271 68 0 chr17 20406266 20406443 -65032037 - MER58A DNA MER1_type -34 190 2 3146 230 94 70 chr17 20406443 20406927 -65031553 - L1MC/D LINE L1 -1923 4292 3821 2701 160 14 14 chr17 20406927 20407439 -65031041 - L1MC1 LINE L1 -1 6332 5821 3146 230 94 70 chr17 20407439 20408045 -65030435 - L1MC/D LINE L1 -2394 3821 3231 1867 173 43 6 chr17 20408045 20408397 -65030083 - MLT1A1 LTR MaLR 0 365 1 3146 230 94 70 chr17 20408397 20408811 -65029669 - L1MC/D LINE L1 -2984 3231 2737 2189 48 100 0 chr17 20408811 20409082 -65029398 + AluY SINE Alu 1 298 -13 3146 230 94 70 chr17 20409082 20409312 -65029168 - L1MC/D LINE L1 -3478 2737 2514 1157 61 0 0 chr17 20409351 20409483 -65028997 - AluY SINE Alu -179 132 1 1291 253 42 48 chr17 20409504 20410029 -65028451 - L1MC/D LINE L1 -3879 2517 1995 1676 114 19 4 chr17 20410029 20410291 -65028189 + L1PB1 LINE L1 5879 6144 -7 1291 253 42 48 chr17 20410291 20410343 -65028137 - L1MC/D LINE L1 -4401 1995 1944 312 221 19 10 chr17 20410478 20410582 -65027898 - L1MC/D LINE L1 -5264 1132 1028 1475 303 68 12 chr17 20410626 20411290 -65027190 - L1MC/D LINE L1 -5656 740 40 437 307 184 27 chr17 20411296 20411628 -65026852 + L2 LINE L2 2929 3312 -1 1095 226 63 19 chr17 20412257 20412527 -65025953 - AluJo SINE Alu -30 282 1 5377 112 26 10 chr17 20412774 20413742 -65024738 - L1PB3 LINE L1 0 6154 5157 1823 123 11 0 chr17 20413745 20414014 -65024466 - AluSp SINE Alu 0 313 42 493 62 0 0 chr17 20414016 20414081 -65024399 + Alu SINE Alu 240 304 -8 234 0 0 0 chr17 20414081 20414107 -65024373 + (TA)n Simple_repeat Simple_repeat 2 27 0 610 103 0 10 chr17 20414107 20414204 -65024276 - L1PB3 LINE L1 -34 6120 6025 813 165 0 0 chr17 20414224 20414345 -65024135 - FLAM_C SINE Alu -11 132 12 3406 191 68 6 chr17 20414355 20414946 -65023534 - L1PB3 LINE L1 -1144 5002 4342 207 114 0 0 chr17 20414946 20414981 -65023499 + (TTG)n Simple_repeat Simple_repeat 3 37 0 3406 191 68 6 chr17 20414981 20415231 -65023249 - L1PB3 LINE L1 -1804 4342 4109 351 0 0 0 chr17 20416980 20417019 -65021461 + (CA)n Simple_repeat Simple_repeat 2 40 0 2024 81 0 11 chr17 20417482 20417753 -65020727 + AluY SINE Alu 40 307 -4 1852 154 3 13 chr17 20418079 20418378 -65020102 + AluJb SINE Alu 1 296 -16 225 0 0 0 chr17 20420454 20420479 -65018001 + (T)n Simple_repeat Simple_repeat 1 25 0 1095 73 0 0 chr17 20420498 20420634 -65017846 - AluSq/x SINE Alu -177 136 1 406 327 59 0 chr17 20420896 20421049 -65017431 - L2 LINE L2 -431 2883 2722 27 62 0 0 chr17 20421679 20421727 -65016753 + AT_rich Low_complexity Low_complexity 1 48 0 699 147 7 33 chr17 20422231 20422381 -65016099 - L1MB8 LINE L1 -1 6177 6032 3511 163 27 14 chr17 20422386 20423153 -65015327 - L1MB8 LINE L1 -208 5970 5188 28 29 0 0 chr17 20423160 20423195 -65015285 + AT_rich Low_complexity Low_complexity 1 35 0 864 142 8 0 chr17 20423195 20423315 -65015165 - FLAM_C SINE Alu -22 121 1 1180 196 146 5 chr17 20423317 20423695 -65014785 - L1MB8 LINE L1 -945 5201 4771 832 262 104 17 chr17 20425060 20425487 -65012993 - MLT1G1 LTR MaLR -2 593 45 603 246 0 0 chr17 20425530 20425656 -65012824 - FLAM_A SINE Alu -16 126 1 915 138 17 6 chr17 20425660 20425841 -65012639 - L1MA5 LINE L1 0 6300 6118 1160 118 0 6 chr17 20425851 20426012 -65012468 + AluSg/x SINE Alu 136 295 -17 3569 172 30 45 chr17 20426012 20427546 -65010934 - L1MA5 LINE L1 -192 6108 4600 4615 151 22 30 chr17 20427588 20428624 -65009856 - L1PA16 LINE L1 -1 6816 5792 180 111 0 0 chr17 20428626 20428653 -65009827 + (T)n Simple_repeat Simple_repeat 1 27 0 392 241 12 56 chr17 20430134 20430296 -65008184 + CT-rich Low_complexity Low_complexity 2 156 0 8775 239 44 51 chr17 20430791 20431917 -65006563 - L1PA16 LINE L1 -998 5799 4666 735 181 0 40 chr17 20431917 20432066 -65006414 - FLAM_C SINE Alu 0 143 1 8775 239 44 51 chr17 20432066 20432856 -65005624 - L1PA16 LINE L1 -2131 4666 3872 258 32 0 0 chr17 20432856 20432887 -65005593 + (TTTA)n Simple_repeat Simple_repeat 1 31 0 8775 239 44 51 chr17 20432887 20435197 -65003283 - L1PA16 LINE L1 -2925 3872 1495 2263 124 0 12 chr17 20435936 20436274 -65002206 + MER1B DNA MER1_type 4 337 0 270 335 7 40 chr17 20436385 20436537 -65001943 - L1PA16 LINE L1 -5278 1509 1363 931 343 33 23 chr17 20436574 20437149 -65001331 - L1PA16 LINE L1 -6206 581 1 1524 177 28 64 chr17 20437170 20437640 -65000840 - L1 LINE L1 -1536 5672 5220 * 5986 235 80 28 chr17 20437633 20439423 -64999057 - L1 LINE L1 -2399 4809 3112 1922 168 0 10 chr17 20439423 20439733 -64998747 - AluSx SINE Alu -5 307 1 5986 235 80 28 chr17 20439733 20441669 -64996811 - L1 LINE L1 -4096 3112 841 787 240 5 0 chr17 20441761 20441971 -64996509 - L1 LINE L1 -6628 581 13 234 268 0 14 chr17 20443131 20443202 -64995278 + Tigger5 DNA MER2_type 2249 2318 -5 322 250 0 25 chr17 20443220 20443300 -64995180 - Tigger5 DNA MER2_type -2244 79 2 981 279 131 24 chr17 20443704 20444170 -64994310 - MLT1G1 LTR MaLR -37 558 2 2197 67 19 48 chr17 20444922 20445234 -64993246 + AluY SINE Alu 1 303 -8 504 184 9 0 chr17 20447386 20447495 -64990985 - L1MA9 LINE L1 -39 6273 6164 894 196 0 46 chr17 20449139 20449312 -64989168 + FAM SINE Alu 2 166 -9 1710 131 3 79 chr17 20449807 20450181 -64988299 - MER4A LTR ERV1 0 664 261 569 124 21 10 chr17 20450181 20450278 -64988202 - MER4A LTR ERV1 -566 98 1 2095 118 9 32 chr17 20450350 20450665 -64987815 + AluSx SINE Alu 1 308 -4 2203 104 0 0 chr17 20450907 20451196 -64987284 + AluSx SINE Alu 6 294 -18 2302 114 0 0 chr17 20452185 20452493 -64985987 - AluSg SINE Alu 0 310 3 2341 76 0 0 chr17 20452506 20452821 -64985659 - AluY SINE Alu 0 311 1 341 266 53 26 chr17 20452901 20453014 -64985466 + MIR3 SINE MIR 45 160 -48 279 289 159 72 chr17 20454833 20455332 -64983148 + L2 LINE L2 2745 3272 0 1597 194 7 3 chr17 20455532 20455864 -64982616 + AluJb SINE Alu 1 333 0 1225 235 119 12 chr17 20456627 20457057 -64981423 - L1MC4 LINE L1 -150 7892 7417 7701 145 10 1 chr17 20457076 20459194 -64979286 - L1PA11 LINE L1 -1 7611 5484 13036 182 13 20 chr17 20459195 20460761 -64977719 + L1PB1 LINE L1 2801 4377 -2490 2107 150 22 30 chr17 20460761 20461128 -64977352 + THE1B LTR MaLR 1 364 0 13036 182 13 20 chr17 20461128 20463665 -64974815 + L1PB1 LINE L1 4377 6865 -2 9009 226 16 17 chr17 20463670 20466385 -64972095 - L1PA11 LINE L1 -2932 4652 1130 700 126 42 48 chr17 20466408 20466575 -64971905 - L1MC4 LINE L1 -635 7407 7242 986 201 48 92 chr17 20466666 20467057 -64971423 - L1MD3 LINE L1 0 8041 7682 407 221 2 4 chr17 20467105 20467212 -64971268 - L1PA13 LINE L1 -5073 1388 1283 2141 254 107 70 chr17 20467214 20468221 -64970259 - L1MC4a LINE L1 -250 7558 6515 850 205 44 44 chr17 20468222 20468427 -64970053 - Tigger2 DNA MER2_type -3 2715 2511 484 191 0 0 chr17 20468427 20468521 -64969959 - L1 LINE L1 -1458 4688 4595 * 800 206 0 0 chr17 20468518 20468688 -64969792 + L1P LINE L1 4724 4893 -1253 2483 127 27 11 chr17 20468689 20469316 -64969164 - L1P4 LINE L1 -529 5636 5000 395 143 0 0 chr17 20469316 20469372 -64969108 - AluJ/FLAM SINE Alu -245 57 2 1031 104 0 0 chr17 20470678 20470813 -64967667 + AluSp/q SINE Alu 157 291 -22 2269 98 3 0 chr17 20470821 20471159 -64967321 + AluSp SINE Alu 1 339 0 307 287 66 29 chr17 20472205 20472341 -64966139 + Charlie8 DNA MER1_type 1 141 -2276 1259 166 9 37 chr17 20472988 20473205 -64965275 - AluJb SINE Alu -25 287 77 1721 154 0 4 chr17 20473238 20473497 -64964983 + AluJb SINE Alu 1 258 -54 281 121 0 17 chr17 20473597 20473655 -64964825 + AluSp/q SINE Alu 243 299 -4 225 233 240 53 chr17 20474072 20474222 -64964258 + MIR SINE MIR 70 247 -15 2332 185 73 14 chr17 20475988 20476507 -64961973 + MER68 LTR ERV1 1 550 -12 677 138 14 51 chr17 20477279 20477417 -64961063 + FLAM_C SINE Alu 1 133 0 413 279 157 34 chr17 20477913 20478207 -64960273 + L1MC4a LINE L1 5630 5959 -1849 285 69 103 0 chr17 20478208 20478295 -64960185 + (TA)n Simple_repeat Simple_repeat 2 97 0 304 251 48 36 chr17 20478462 20478629 -64959851 + L1MC4a LINE L1 6116 6284 -1524 2213 117 0 0 chr17 20478644 20478935 -64959545 - AluSg SINE Alu -18 292 2 1046 167 97 147 chr17 20479482 20479677 -64958803 + L1MC5 LINE L1 6732 6935 -1026 1737 183 6 6 chr17 20479677 20479989 -64958491 + AluJb SINE Alu 1 312 0 1046 167 97 147 chr17 20479989 20480277 -64958203 + L1MC5 LINE L1 6935 7191 -770 669 186 174 12 chr17 20480292 20480453 -64958027 - MER20 DNA MER1_type 0 219 33 757 179 201 22 chr17 20480470 20480502 -64957978 + L1MC5 LINE L1 7203 7228 -733 333 0 0 0 chr17 20480502 20480539 -64957941 + (CA)n Simple_repeat Simple_repeat 2 38 0 757 179 201 22 chr17 20480539 20480774 -64957706 + L1MC5 LINE L1 7228 7518 -443 2344 102 0 0 chr17 20480976 20481269 -64957211 + AluSp SINE Alu 1 293 -20 417 39 0 0 chr17 20481287 20481338 -64957142 + (TG)n Simple_repeat Simple_repeat 2 52 0 223 269 51 0 chr17 20481456 20481534 -64956946 + MIR3 SINE MIR 83 164 -44 252 276 26 0 chr17 20481546 20481622 -64956858 + MER116 DNA Mariner 2 79 -1 1452 108 0 0 chr17 20481965 20482150 -64956330 - AluSq SINE Alu -128 185 1 285 75 0 0 chr17 20483558 20483598 -64954882 + (T)n Simple_repeat Simple_repeat 1 40 0 21 36 0 0 chr17 20484510 20484538 -64953942 + AT_rich Low_complexity Low_complexity 1 28 0 199 349 16 0 chr17 20484975 20485038 -64953442 - MIR SINE MIR -185 77 14 2310 95 0 3 chr17 20485189 20485485 -64952995 - AluY SINE Alu -14 297 3 1587 160 46 0 chr17 20485489 20485752 -64952728 - AluSx SINE Alu -18 294 20 202 332 61 19 chr17 20485772 20485986 -64952494 + L2 LINE L2 1864 2086 -1228 251 256 26 0 chr17 20486212 20486290 -64952190 - L1MC4 LINE L1 -141 7901 7822 1856 140 46 0 chr17 20486294 20486579 -64951901 - AluSx SINE Alu -14 298 1 411 237 126 26 chr17 20486582 20486772 -64951708 - L1MC4 LINE L1 -724 7318 7110 2296 100 3 3 chr17 20486786 20487086 -64951394 - AluSc SINE Alu -9 300 1 2137 142 0 0 chr17 20487104 20487399 -64951081 - AluSg SINE Alu -15 295 1 606 140 10 0 chr17 20487408 20487508 -64950972 - AluJo/FRAM SINE Alu -9 303 203 1257 153 5 10 chr17 20487510 20487713 -64950767 - AluSx SINE Alu -78 234 33 1107 129 16 5 chr17 20487758 20487944 -64950536 - AluSg/x SINE Alu -4 305 118 864 162 7 26 chr17 20488045 20488199 -64950281 - AluJb SINE Alu -159 153 3 325 181 0 83 chr17 20488241 20488313 -64950167 - AluJ/FLAM SINE Alu -245 57 1 2701 169 17 117 chr17 20488613 20489209 -64949271 + LTR34 LTR ERV1 4 507 -192 2305 92 3 0 chr17 20489209 20489503 -64948977 - AluSp SINE Alu -18 295 1 2701 169 17 117 chr17 20489503 20489677 -64948803 + LTR34 LTR ERV1 507 697 -2 25 31 0 0 chr17 20489702 20489734 -64948746 + AT_rich Low_complexity Low_complexity 1 32 0 442 187 19 47 chr17 20489755 20489862 -64948618 + L1MC/D LINE L1 5158 5261 -885 699 224 19 9 chr17 20489915 20490129 -64948351 + L1MC/D LINE L1 5259 5474 -2311 1202 202 40 78 chr17 20490224 20490595 -64947885 - MSTD LTR MaLR -39 357 1 385 77 10 34 chr17 20490744 20490810 -64947670 - AluSp/q SINE Alu -7 296 240 2616 152 23 9 chr17 20490923 20491364 -64947116 + MLT1C LTR MaLR 21 467 0 1954 150 6 13 chr17 20491571 20491885 -64946595 + AluJb SINE Alu 1 312 0 1298 169 0 5 chr17 20491977 20492178 -64946302 - AluJo SINE Alu -108 204 5 2184 116 10 0 chr17 20492635 20492937 -64945543 + AluSx SINE Alu 1 305 -7 2104 104 0 10 chr17 20492976 20493264 -64945216 + AluSx SINE Alu 21 305 -7 590 195 47 39 chr17 20493681 20493809 -64944671 - FLAM_A SINE Alu -4 129 1 614 267 33 30 chr17 20495054 20495324 -64943156 + L1M4 LINE L1 4195 4465 -1681 2411 74 0 0 chr17 20496144 20496442 -64942038 - AluY SINE Alu -12 299 2 1965 143 6 16 chr17 20496599 20496914 -64941566 + AluSx SINE Alu 1 312 0 2053 111 0 81 chr17 20496934 20497075 -64941405 + AluSx SINE Alu 1 152 -160 2447 68 3 3 chr17 20497075 20497386 -64941094 + AluY SINE Alu 1 311 0 2053 111 0 81 chr17 20497386 20497578 -64940902 + AluSx SINE Alu 152 307 -5 216 333 16 0 chr17 20497732 20497795 -64940685 + MIR SINE MIR 14 77 -185 1912 156 0 7 chr17 20498918 20499219 -64939261 + AluJb SINE Alu 5 303 -9 2089 121 10 22 chr17 20499345 20499659 -64938821 - AluSx SINE Alu -2 310 1 225 279 0 33 chr17 20501132 20501193 -64937287 - Charlie6 DNA MER1_type -1185 2315 2257 2667 35 0 13 chr17 20501700 20502015 -64936465 + AluY SINE Alu 1 311 0 2932 160 45 37 chr17 20502431 20502695 -64935785 + L1MC4 LINE L1 6976 7236 -806 2266 117 0 0 chr17 20502695 20503003 -64935477 + AluSx SINE Alu 1 308 -4 2932 160 45 37 chr17 20503003 20503387 -64935093 + L1MC4 LINE L1 7236 7629 -413 452 172 0 0 chr17 20503393 20503480 -64935000 + L1MC4 LINE L1 7754 7840 -202 1466 82 16 0 chr17 20503482 20503666 -64934814 + AluSq SINE Alu 1 187 -126 642 96 0 11 chr17 20503666 20503760 -64934720 + AluSg/x SINE Alu 217 309 0 377 169 5 244 chr17 20503760 20503973 -64934507 + L1MC4 LINE L1 7824 7985 -57 2029 134 0 0 chr17 20503973 20504257 -64934223 - AluSg SINE Alu -12 298 15 1941 102 12 65 chr17 20504784 20505107 -64933373 + AluY SINE Alu 6 311 0 2424 100 0 0 chr17 20505126 20505436 -64933044 + AluSg SINE Alu 1 310 0 20149 44 2 2 chr17 20505855 20509103 -64929377 + L1PA5 LINE L1 2933 6154 0 2145 88 14 3 chr17 20509381 20509678 -64928802 + AluSc SINE Alu 1 300 -9 1489 178 0 45 chr17 20510155 20510447 -64928033 + AluJb SINE Alu 1 279 -33 920 158 36 81 chr17 20510545 20510767 -64927713 - L1MA8 LINE L1 -25 6266 6055 2608 53 0 0 chr17 20510980 20511281 -64927199 - AluY SINE Alu -10 301 1 474 284 7 0 chr17 20511843 20511984 -64926496 + L1ME3A LINE L1 2681 2822 -3324 566 245 155 23 chr17 20512009 20512274 -64926206 + L1ME3A LINE L1 4647 4946 -1200 1379 143 113 0 chr17 20512638 20512869 -64925611 - AluJb SINE Alu -55 257 1 375 62 250 0 chr17 20512930 20512994 -64925486 - MADE1 DNA Mariner 0 80 1 806 219 10 42 chr17 20513011 20513203 -64925277 - MER58A DNA MER1_type -9 215 30 2043 131 0 0 chr17 20513884 20514188 -64924292 - AluSx SINE Alu 0 304 1 25 95 0 0 chr17 20514191 20514265 -64924215 + AT_rich Low_complexity Low_complexity 1 74 0 26 0 0 0 chr17 20514336 20514362 -64924118 + AT_rich Low_complexity Low_complexity 1 26 0 2355 76 0 41 chr17 20514425 20514740 -64923740 - AluY SINE Alu -9 302 1 366 237 10 0 chr17 20514747 20514844 -64923636 + L1ME3A LINE L1 5083 5180 -966 10033 22 4 205 chr17 20514849 20516535 -64921945 - SVA Other Other -5 1381 35 392 225 49 21 chr17 20516627 20516769 -64921711 + L1ME3A LINE L1 5187 5332 -814 1594 287 38 9 chr17 20516821 20517371 -64921109 + L1ME3A LINE L1 5319 5884 -286 579 129 0 0 chr17 20517371 20517464 -64921016 + LTR9B LTR ERV1 468 560 -84 2070 118 4 0 chr17 20517744 20518049 -64920431 + AluSx SINE Alu 1 282 -30 3377 128 31 26 chr17 20518334 20518912 -64919568 + LTR35 LTR ERV1 38 618 0 283 353 60 9 chr17 20518912 20519028 -64919452 - MER91A DNA MER1_type -27 169 48 1521 164 73 4 chr17 20519663 20519775 -64918705 + AluJo SINE Alu 7 110 -202 306 0 0 0 chr17 20519775 20519809 -64918671 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 1521 164 73 4 chr17 20519809 20519970 -64918510 + AluJo SINE Alu 110 299 -13 440 120 15 158 chr17 20520198 20520258 -64918222 - L1MA8 LINE L1 -69 6222 6190 1957 116 41 0 chr17 20520258 20520550 -64917930 - AluSg SINE Alu -6 304 1 440 120 15 158 chr17 20520550 20520622 -64917858 - L1MA8 LINE L1 -101 6190 6109 2310 78 0 0 chr17 20520629 20520924 -64917556 - AluY SINE Alu -16 295 1 261 0 0 0 chr17 20521185 20521214 -64917266 + (CA)n Simple_repeat Simple_repeat 2 30 0 41 21 0 0 chr17 20521313 20521361 -64917119 + GC_rich Low_complexity Low_complexity 1 48 0 22 70 0 0 chr17 20521416 20521459 -64917021 + GC_rich Low_complexity Low_complexity 1 43 0 21 0 0 0 chr17 20523337 20523358 -64915122 + AT_rich Low_complexity Low_complexity 1 21 0 295 47 0 0 chr17 20523805 20523848 -64914632 + AluY SINE Alu 257 299 -1 658 205 0 8 chr17 20526991 20527118 -64911362 + AluJb SINE Alu 87 212 -100 3127 175 56 24 chr17 20527207 20527491 -64910989 - L1MB3 LINE L1 -2 6182 5909 2312 91 7 0 chr17 20527491 20527798 -64910682 - AluSx SINE Alu -3 309 1 3127 175 56 24 chr17 20527798 20528211 -64910269 - L1MB3 LINE L1 -275 5909 5443 1325 273 138 24 chr17 20528664 20528716 -64909764 - L1ME2 LINE L1 -12 6152 6107 1658 163 10 7 chr17 20528716 20529011 -64909469 - AluJo SINE Alu -16 296 1 1325 273 138 24 chr17 20529011 20529470 -64909010 - L1ME2 LINE L1 -57 6107 5561 1805 142 6 22 chr17 20529470 20529787 -64908693 - AluJb SINE Alu 0 312 1 1325 273 138 24 chr17 20529787 20529868 -64908612 - L1ME2 LINE L1 -603 5561 5491 364 210 74 0 chr17 20530651 20530732 -64907748 + MIR3 SINE MIR 68 154 -54 201 224 171 13 chr17 20531537 20531613 -64906867 + MIR SINE MIR 9 96 -166 2542 46 0 0 chr17 20532488 20532793 -64905687 + AluY SINE Alu 1 305 -6 1655 164 7 32 chr17 20532859 20533169 -64905311 - AluJo SINE Alu -10 302 1 723 310 88 56 chr17 20533285 20533782 -64904698 + L1ME LINE L1 3694 4206 -1940 249 33 0 0 chr17 20534125 20534155 -64904325 + (TG)n Simple_repeat Simple_repeat 1 30 0 225 0 0 0 chr17 20534168 20534193 -64904287 + (CA)n Simple_repeat Simple_repeat 2 26 0 3905 227 163 70 chr17 20534273 20535244 -64903236 + HAL1 LINE L1 14 894 -1613 2358 103 42 3 chr17 20535244 20535604 -64902876 + L1MB2 LINE L1 5794 6167 -4 3905 227 163 70 chr17 20535604 20536472 -64902008 + HAL1 LINE L1 894 2088 -419 2096 111 10 0 chr17 20536472 20536770 -64901710 + AluSx SINE Alu 1 301 -11 3905 227 163 70 chr17 20536770 20537113 -64901367 + HAL1 LINE L1 2088 2398 -109 313 295 100 16 chr17 20537416 20537606 -64900874 + L1ME LINE L1 5487 5692 -429 1353 208 0 24 chr17 20537660 20537949 -64900531 - AluJo SINE Alu -30 282 1 3693 146 11 22 chr17 20538004 20539099 -64899381 - L1MA4A LINE L1 -284 6019 4970 1008 182 27 23 chr17 20539103 20539323 -64899157 + L1 LINE L1 3835 4055 -2091 222 91 0 0 chr17 20539655 20539688 -64898792 + (CTTTG)n Simple_repeat Simple_repeat 3 35 0 641 113 0 9 chr17 20539691 20539797 -64898683 + (TTCC)n Simple_repeat Simple_repeat 4 108 0 1947 141 6 10 chr17 20539809 20540122 -64898358 - AluSx SINE Alu 0 312 1 2424 57 0 0 chr17 20540502 20540801 -64897679 - AluY SINE Alu -12 299 1 2180 107 0 3 chr17 20540801 20541101 -64897379 - AluY SINE Alu -12 299 1 244 308 15 0 chr17 20541220 20541285 -64897195 - L2 LINE L2 -20 3252 3187 2153 87 7 0 chr17 20542240 20542526 -64895954 - AluSc SINE Alu -21 288 1 1624 150 29 29 chr17 20543747 20543859 -64894621 + AluJo SINE Alu 1 112 -200 2668 130 34 0 chr17 20543859 20544273 -64894207 - MSTA LTR MaLR 0 428 1 1624 150 29 29 chr17 20544273 20544467 -64894013 + AluJo SINE Alu 111 307 -5 296 236 0 34 chr17 20547481 20547570 -64890910 + MIR SINE MIR 81 166 -96 261 0 0 0 chr17 20548104 20548133 -64890347 + (A)n Simple_repeat Simple_repeat 1 29 0 458 81 32 0 chr17 20549069 20549131 -64889349 + AluSg/x SINE Alu 164 227 -83 180 0 0 0 chr17 20549143 20549163 -64889317 + (A)n Simple_repeat Simple_repeat 1 20 0 1802 147 26 16 chr17 20549459 20549766 -64888714 + AluSg SINE Alu 1 310 0 180 243 0 0 chr17 20550602 20550639 -64887841 - L2 LINE L2 -87 3185 3149 447 200 67 0 chr17 20551331 20551421 -64887059 - MER45A DNA AcHobo -52 126 31 1732 185 119 29 chr17 20551634 20552055 -64886425 - LTR2B LTR ERV1 0 490 32 719 165 0 47 chr17 20552154 20552281 -64886199 - FLAM_A SINE Alu -10 132 12 224 358 108 8 chr17 20552309 20552429 -64886051 - MIR3 SINE MIR -7 201 70 660 176 59 17 chr17 20552840 20552959 -64885521 + FLAM_C SINE Alu 1 124 -9 3319 138 14 31 chr17 20553566 20554139 -64884341 + L1MB1 LINE L1 5367 5929 -239 8892 127 51 8 chr17 20554165 20555517 -64882963 - THE1C-int LTR MaLR -170 1410 1 1582 117 53 148 chr17 20555519 20555931 -64882549 - THE1C LTR MaLR -2 373 1 1100 109 81 101 chr17 20555932 20556064 -64882416 + L1MB1 LINE L1 5926 6052 -116 1291 98 57 0 chr17 20556064 20556257 -64882223 + L1PA16 LINE L1 5953 6157 -9 1100 109 81 101 chr17 20556257 20556372 -64882108 + L1MB1 LINE L1 6052 6168 0 733 226 28 77 chr17 20556572 20556721 -64881759 + MIR SINE MIR 51 186 -76 2165 108 3 3 chr17 20556721 20557028 -64881452 + AluSx SINE Alu 1 307 -5 733 226 28 77 chr17 20557028 20557099 -64881381 + MIR SINE MIR 186 259 -3 1814 247 68 56 chr17 20557357 20557698 -64880782 - L1MCa LINE L1 -2030 4396 4061 2141 78 7 0 chr17 20557698 20558009 -64880471 + AluSp SINE Alu 1 313 0 1814 247 68 56 chr17 20558009 20558574 -64879906 - L1MCa LINE L1 -2365 4061 3478 673 306 74 50 chr17 20558576 20559571 -64878909 - L1MCa LINE L1 -4669 1938 829 261 248 68 30 chr17 20559833 20559966 -64878514 + L1M4 LINE L1 5262 5399 -747 256 261 136 45 chr17 20560608 20560784 -64877696 + LTR67 LTR ERVL 358 549 -8 390 254 15 90 chr17 20560979 20561113 -64877367 - L2 LINE L2 -1 3312 3189 195 69 0 0 chr17 20561185 20561214 -64877266 + (CA)n Simple_repeat Simple_repeat 2 30 0 2387 69 3 0 chr17 20561828 20562131 -64876349 - AluY SINE Alu -7 304 1 558 67 0 0 chr17 20565041 20565116 -64873364 + (TG)n Simple_repeat Simple_repeat 2 76 0 1958 126 19 13 chr17 20565185 20565495 -64872985 + AluSx SINE Alu 1 312 0 402 105 0 7 chr17 20565503 20565564 -64872916 + Alu SINE Alu 3 55 -246 1336 201 0 19 chr17 20565565 20565833 -64872647 - AluJb SINE Alu -49 263 1 2131 135 78 66 chr17 20565981 20566313 -64872167 + MSTA LTR MaLR 1 328 -100 2217 93 0 7 chr17 20566313 20566614 -64871866 - AluY SINE Alu -11 300 2 2131 135 78 66 chr17 20566614 20566661 -64871819 + MSTA LTR MaLR 328 373 -55 2044 137 0 0 chr17 20566661 20566961 -64871519 - AluSx SINE Alu -12 300 1 2131 135 78 66 chr17 20566961 20567003 -64871477 + MSTA LTR MaLR 373 428 0 242 281 288 13 chr17 20567017 20567170 -64871310 - MIR SINE MIR -30 232 38 885 165 0 0 chr17 20567715 20567848 -64870632 - AluSq/x SINE Alu -180 133 1 188 246 16 16 chr17 20568106 20568167 -64870313 + L2 LINE L2 2921 2981 -332 26 30 0 0 chr17 20569254 20569287 -64869193 + AT_rich Low_complexity Low_complexity 1 33 0 2090 108 10 10 chr17 20569287 20569575 -64868905 - AluSx SINE Alu -24 288 1 306 87 0 0 chr17 20569995 20570041 -64868439 + (TG)n Simple_repeat Simple_repeat 1 46 0 1536 211 13 0 chr17 20570238 20570536 -64867944 + AluJb SINE Alu 1 302 -10 349 311 108 37 chr17 20570573 20570837 -64867643 + L1ME4a LINE L1 5257 5501 -620 2518 62 0 3 chr17 20570837 20571143 -64867337 + AluY SINE Alu 1 305 -6 349 311 108 37 chr17 20571143 20571587 -64866893 + L1ME4a LINE L1 5501 6024 -97 2388 81 7 0 chr17 20572025 20572320 -64866160 + AluY SINE Alu 1 297 -14 3535 83 26 14 chr17 20573076 20573581 -64864899 - MER9 LTR ERVK 0 511 1 184 316 13 13 chr17 20575525 20575604 -64862876 - MIR3 SINE MIR -12 196 118 204 40 0 0 chr17 20577648 20577673 -64860807 + (TCC)n Simple_repeat Simple_repeat 1 25 0 272 342 0 40 chr17 20578688 20578837 -64859643 + MER5B DNA MER1_type 3 145 -33 215 307 10 30 chr17 20579009 20579110 -64859370 - MER5B DNA MER1_type -17 161 63 1452 254 59 61 chr17 20580182 20580571 -64857909 + MER82 DNA MER2_type 199 588 -65 1982 95 84 4 chr17 20580571 20580844 -64857636 + AluSp SINE Alu 1 295 -18 1452 254 59 61 chr17 20580844 20580910 -64857570 + MER82 DNA MER2_type 588 653 0 2281 119 3 0 chr17 20580994 20581296 -64857184 - AluSq SINE Alu -10 303 1 753 233 12 6 chr17 20581836 20581999 -64856481 + FRAM SINE Alu 1 164 -2 307 143 0 14 chr17 20582540 20582610 -64855870 + L1PA16 LINE L1 6080 6148 -18 363 145 12 48 chr17 20583605 20583688 -64854792 + L1 LINE L1 5174 5253 -893 2027 119 3 19 chr17 20583689 20583826 -64854654 + AluSq SINE Alu 1 139 -174 2206 124 0 0 chr17 20583826 20584125 -64854355 + AluSc SINE Alu 1 299 -10 2027 119 3 19 chr17 20584125 20584298 -64854182 + AluSq SINE Alu 139 306 -7 5626 221 41 56 chr17 20584307 20585451 -64853029 + L1MB7 LINE L1 2425 3585 -2561 2394 99 7 0 chr17 20585451 20585755 -64852725 + AluSp SINE Alu 1 306 -7 5626 221 41 56 chr17 20585755 20586124 -64852356 + L1MB7 LINE L1 3585 3907 -2239 2367 103 0 6 chr17 20586124 20586435 -64852045 + AluY SINE Alu 1 309 -2 5626 221 41 56 chr17 20586435 20586777 -64851703 + L1MB7 LINE L1 3907 4253 -1893 1612 215 36 34 chr17 20586775 20587193 -64851287 + L1MB7 LINE L1 4879 5297 -849 * 3943 178 66 41 chr17 20587485 20588402 -64850078 + L1MB7 LINE L1 5256 6177 -7 307 306 56 28 chr17 20588413 20588557 -64849923 + L1MC4a LINE L1 6058 6205 -1603 496 181 143 0 chr17 20589137 20589242 -64849238 + MER103 DNA DNA 1 120 -46 370 273 39 54 chr17 20589963 20590168 -64848312 + L2 LINE L2 2902 3103 -169 555 290 52 13 chr17 20590174 20590405 -64848075 + MIR SINE MIR 7 246 -16 23 33 0 0 chr17 20590796 20590826 -64847654 + AT_rich Low_complexity Low_complexity 1 30 0 2415 60 7 17 chr17 20590948 20591250 -64847230 + AluY SINE Alu 1 299 -12 235 269 77 48 chr17 20591253 20591461 -64847019 + L1M4 LINE L1 3723 3936 -2210 1207 63 7 0 chr17 20591513 20591655 -64846825 + AluSp SINE Alu 1 143 -170 2190 99 3 3 chr17 20591655 20591947 -64846533 + AluSq SINE Alu 12 303 -10 323 286 139 54 chr17 20591949 20592302 -64846178 + L1M4 LINE L1 3982 4364 -1782 402 269 86 46 chr17 20593934 20594162 -64844318 + L1M4 LINE L1 2963 3209 -2937 2415 81 0 0 chr17 20594162 20594457 -64844023 + AluY SINE Alu 1 295 -16 402 269 86 46 chr17 20594457 20594552 -64843928 + L1M4 LINE L1 3209 3299 -2847 921 108 8 8 chr17 20594674 20594803 -64843677 + AluSq/x SINE Alu 1 129 -184 2077 104 30 10 chr17 20594805 20595103 -64843377 + AluSg SINE Alu 4 307 -3 628 284 54 31 chr17 20595120 20595567 -64842913 + L1M4 LINE L1 3441 3897 -2249 2271 178 60 8 chr17 20597058 20597647 -64840833 - L1PB4 LINE L1 0 6161 5514 908 206 20 10 chr17 20597634 20597838 -64840642 - L1PB4 LINE L1 -1067 5079 4874 * 536 275 52 34 chr17 20597854 20598123 -64840357 - L1MCa LINE L1 -1983 4443 4170 25 51 0 0 chr17 20599532 20599571 -64838909 + AT_rich Low_complexity Low_complexity 1 39 0 1220 71 0 30 chr17 20599857 20600025 -64838455 - L1PB1 LINE L1 -7 6144 5982 1843 224 81 35 chr17 20600872 20601729 -64836751 - L1MCa LINE L1 -3223 3203 2316 786 256 13 58 chr17 20601739 20601939 -64836541 - L1MA10 LINE L1 -14 6320 6113 222 37 0 0 chr17 20601939 20601966 -64836514 + (TTTTG)n Simple_repeat Simple_repeat 5 31 0 2251 106 0 3 chr17 20601973 20602266 -64836214 - AluSc SINE Alu -17 292 1 786 256 13 58 chr17 20602266 20602369 -64836111 - L1MA10 LINE L1 -227 6107 6023 295 169 68 0 chr17 20602383 20602442 -64836038 - L1MA9 LINE L1 0 6312 6250 749 231 62 54 chr17 20602455 20602774 -64835706 - L1M4 LINE L1 -3849 3108 2783 2276 117 0 0 chr17 20602774 20603083 -64835397 - AluSg1 SINE Alu 0 309 1 749 231 62 54 chr17 20603083 20603192 -64835288 - L1M4 LINE L1 -4174 2783 2676 315 153 68 0 chr17 20603198 20603257 -64835223 + AluS SINE Alu 1 63 -245 844 199 41 0 chr17 20603357 20603528 -64834952 - L1M4 LINE L1 -6675 184 7 317 127 16 16 chr17 20603531 20603594 -64834886 + MLT1E1 LTR MaLR 587 649 -5 2331 87 7 3 chr17 20603765 20604065 -64834415 - AluSp SINE Alu -12 301 1 180 248 238 9 chr17 20604221 20604326 -64834154 - MIR SINE MIR -17 245 117 2056 117 8 72 chr17 20604722 20605082 -64833398 - MER1B DNA MER1_type 0 337 1 774 280 91 35 chr17 20605409 20605895 -64832585 + L1ME4a LINE L1 5608 6120 -1 1560 149 0 0 chr17 20605975 20606203 -64832277 + AluJb SINE Alu 85 312 0 1665 163 48 17 chr17 20608088 20608383 -64830097 - AluJo SINE Alu -7 305 2 2205 141 0 3 chr17 20609341 20609654 -64828826 - AluSx SINE Alu 0 312 1 2214 105 0 54 chr17 20609850 20610165 -64828315 - AluY SINE Alu -13 298 1 416 236 0 0 chr17 20610185 20610291 -64828189 - L1ME2 LINE L1 -6 6156 6053 331 278 146 35 chr17 20611137 20611281 -64827199 + MIR SINE MIR 79 238 -24 2006 133 0 20 chr17 20611382 20611682 -64826798 - AluJb SINE Alu -18 294 1 522 226 73 0 chr17 20611682 20611819 -64826661 + Charlie1 DNA MER1_type 71 217 -2544 468 172 54 0 chr17 20611833 20611926 -64826554 + Charlie1 DNA MER1_type 2634 2731 -30 203 250 52 73 chr17 20611962 20612058 -64826422 + MIR SINE MIR 162 255 -7 1568 173 52 4 chr17 20612989 20613260 -64825220 + AluJo SINE Alu 3 286 -26 2262 101 0 29 chr17 20613806 20614113 -64824367 + AluSx SINE Alu 1 298 -14 2126 111 0 4 chr17 20614171 20614483 -64823997 + AluSc SINE Alu 1 311 0 21 71 0 0 chr17 20616024 20616066 -64822414 + AT_rich Low_complexity Low_complexity 1 42 0 1889 119 6 68 chr17 20617072 20617408 -64821072 + MER1B DNA MER1_type 1 315 -24 1053 224 9 0 chr17 20617466 20617680 -64820800 - MER20 DNA MER1_type 0 219 4 284 327 9 9 chr17 20617707 20617820 -64820660 - L2 LINE L2 -951 2363 2251 325 320 50 50 chr17 20618117 20618298 -64820182 - MIR SINE MIR -54 208 28 180 200 0 0 chr17 20619118 20619163 -64819317 + (TG)n Simple_repeat Simple_repeat 1 45 0 480 277 12 0 chr17 20619205 20619371 -64819109 + (TG)n Simple_repeat Simple_repeat 1 168 0 204 229 16 0 chr17 20619391 20619452 -64819028 + (TG)n Simple_repeat Simple_repeat 1 62 0 224 195 0 0 chr17 20619495 20619536 -64818944 + L2 LINE L2 3016 3056 -216 270 304 0 13 chr17 20619682 20619761 -64818719 + L2 LINE L2 3190 3267 -5 479 202 0 0 chr17 20620170 20620264 -64818216 - MER5A DNA MER1_type -83 106 13 1981 117 37 0 chr17 20620458 20620758 -64817722 + AluY SINE Alu 1 311 0 281 212 188 12 chr17 20620816 20620953 -64817527 + MIR SINE MIR 16 183 -62 182 266 0 62 chr17 20621013 20621077 -64817403 + MIR SINE MIR 93 149 -59 405 286 235 8 chr17 20621170 20621408 -64817072 + L2 LINE L2 3021 3312 -1 263 359 96 13 chr17 20621996 20622152 -64816328 + MIR SINE MIR 13 181 -81 1862 133 0 7 chr17 20622649 20622928 -64815552 - AluSx SINE Alu -35 277 1 358 248 86 34 chr17 20623166 20623283 -64815197 + L1ME4a LINE L1 5559 5681 -440 773 241 6 13 chr17 20623290 20623448 -64815032 + AluJo SINE Alu 125 281 -31 243 0 0 0 chr17 20623451 20623478 -64815002 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 586 227 94 94 chr17 20623529 20623921 -64814559 + L1ME4a LINE L1 5730 6121 0 828 222 104 83 chr17 20624151 20624611 -64813869 + MER113 DNA MER1_type? 1 470 -51 331 229 171 0 chr17 20624711 20624816 -64813664 + L2 LINE L2 3149 3271 -1 348 283 294 6 chr17 20625239 20625416 -64813064 - MIR SINE MIR -29 233 6 238 331 115 14 chr17 20625560 20625699 -64812781 - L2 LINE L2 -6 3307 3155 382 274 105 20 chr17 20626330 20626483 -64811997 + MIR3 SINE MIR 20 185 -23 447 265 38 0 chr17 20627517 20627649 -64810831 + MIR SINE MIR 56 192 -70 194 261 46 0 chr17 20628546 20628611 -64809869 + L2 LINE L2 3145 3212 -60 263 325 111 0 chr17 20629437 20629554 -64808926 - MIR SINE MIR -1 261 132 760 239 211 28 chr17 20629660 20630020 -64808460 - L2 LINE L2 0 3313 2888 571 258 7 26 chr17 20630078 20630233 -64808247 + MER103 DNA DNA 2 153 -13 362 281 21 0 chr17 20631903 20631999 -64806481 - MER5A DNA MER1_type -77 112 15 676 158 9 0 chr17 20632427 20632541 -64805939 - THE1-int LTR MaLR -527 1053 939 998 155 12 0 chr17 20632590 20632751 -64805729 - AluSg/x SINE Alu -6 306 144 1985 123 3 0 chr17 20632773 20633084 -64805396 - AluSp SINE Alu 0 312 1 204 40 0 0 chr17 20634026 20634051 -64804429 + (TCCC)n Simple_repeat Simple_repeat 2 26 0 182 247 180 34 chr17 20634241 20634330 -64804150 + L2 LINE L2 2605 2706 -608 772 270 17 0 chr17 20634344 20634522 -64803958 - MIR SINE MIR -3 259 79 432 304 83 24 chr17 20634576 20634744 -64803736 - MER5B DNA MER1_type 0 178 1 343 354 40 18 chr17 20634796 20635022 -64803458 + L2 LINE L2 3083 3313 0 251 267 128 0 chr17 20635042 20635128 -64803352 + MIR SINE MIR 44 140 -122 264 333 10 0 chr17 20637872 20637968 -64800512 - MIR SINE MIR -129 133 37 290 280 57 105 chr17 20638314 20638646 -64799834 - L2 LINE L2 -51 3221 2906 221 307 54 18 chr17 20638673 20638839 -64799641 - L2 LINE L2 -464 2850 2679 353 217 50 159 chr17 20639575 20639729 -64798751 - MER102b DNA MER1_type -2187 230 114 701 219 0 0 chr17 20639729 20639848 -64798632 - FLAM_A SINE Alu -13 120 2 353 217 50 159 chr17 20639848 20639951 -64798529 - MER102b DNA MER1_type -2303 114 1 596 266 17 17 chr17 20639962 20640135 -64798345 - MIR SINE MIR -70 192 20 1554 125 129 21 chr17 20640860 20641139 -64797341 - AluSg SINE Alu -1 309 1 2136 107 101 3 chr17 20641141 20641469 -64797011 - L1PA11 LINE L1 -10 6164 5805 612 282 33 33 chr17 20642435 20642680 -64795800 + Tigger8 DNA MER2_type 236 480 -186 1581 160 0 63 chr17 20642683 20643001 -64795479 + AluJo SINE Alu 1 298 -14 265 252 81 27 chr17 20644402 20644513 -64793967 - L2 LINE L2 -46 3226 3110 557 295 72 10 chr17 20645054 20645261 -64793219 + MIR SINE MIR 32 251 -11 641 251 53 48 chr17 20645458 20645665 -64792815 - MER102b DNA MER1_type -7 334 127 1860 165 0 3 chr17 20645739 20646030 -64792450 + AluJb SINE Alu 1 290 -22 522 198 69 45 chr17 20646047 20646249 -64792231 + L1MC5 LINE L1 7711 7917 -44 252 338 0 0 chr17 20646262 20646333 -64792147 - MER102b DNA MER1_type -267 74 4 225 354 24 0 chr17 20646484 20646566 -64791914 + MIR SINE MIR 47 130 -132 1386 191 0 41 chr17 20647024 20647352 -64791128 - AluJo SINE Alu 0 316 1 359 275 62 62 chr17 20647385 20647709 -64790771 + L1MC4a LINE L1 5685 5801 -320 1814 173 86 45 chr17 20647716 20647947 -64790533 + MLT1D LTR MaLR 19 276 -229 1981 141 0 10 chr17 20647947 20648260 -64790220 - AluJb SINE Alu 0 312 3 1814 173 86 45 chr17 20648260 20648449 -64790031 + MLT1D LTR MaLR 276 456 -49 364 241 75 23 chr17 20648578 20648711 -64789769 + MIR SINE MIR 46 185 -77 253 170 73 4 chr17 20649179 20649249 -64789231 + MLT1D LTR MaLR 356 456 -39 576 180 0 2 chr17 20649324 20649433 -64789047 - MIR SINE MIR -56 152 45 213 153 153 0 chr17 20650659 20650718 -64787762 + L2 LINE L2 2985 3052 -220 565 273 164 9 chr17 20650734 20650954 -64787526 - MIR SINE MIR 0 262 9 376 184 26 0 chr17 20651776 20651852 -64786628 - MIR SINE MIR -63 145 68 1250 288 149 15 chr17 20652636 20652717 -64785763 + L1ME3 LINE L1 5491 5560 -602 1868 164 0 16 chr17 20652717 20653034 -64785446 + AluJb SINE Alu 1 312 0 1250 288 149 15 chr17 20653034 20653495 -64784985 + L1ME3 LINE L1 5560 6121 -41 1575 178 7 10 chr17 20653495 20653813 -64784667 + AluJo SINE Alu 1 312 0 1250 288 149 15 chr17 20653813 20653859 -64784621 + L1ME3 LINE L1 6121 6159 -3 928 283 127 36 chr17 20654303 20655117 -64783363 + L1MD1 LINE L1 5446 5996 -246 2593 175 52 25 chr17 20654357 20654716 -64783764 + L1MB3 LINE L1 5534 5915 -268 2301 107 0 0 chr17 20654716 20655026 -64783454 + AluSx SINE Alu 1 310 -2 2593 175 52 25 chr17 20655026 20655227 -64783253 + L1MB3 LINE L1 5915 6109 -74 1201 258 102 17 chr17 20655227 20655580 -64782900 - MLT1G3 LTR MaLR -212 383 1 200 323 94 0 chr17 20655589 20655685 -64782795 - L2 LINE L2 -36 3236 3132 2151 97 3 3 chr17 20655724 20656024 -64782456 - AluSx SINE Alu -12 300 1 702 286 68 5 chr17 20656055 20656261 -64782219 - MIR SINE MIR -30 232 14 517 332 45 9 chr17 20656657 20656877 -64781603 + MIR SINE MIR 20 247 -15 419 305 108 15 chr17 20656898 20657101 -64781379 - L3 LINE CR1 -471 1106 885 232 365 43 0 chr17 20657725 20657840 -64780640 - MIR SINE MIR -44 218 99 1102 158 49 0 chr17 20657864 20658067 -64780413 + L1MB3 LINE L1 5970 6182 -1 391 243 27 74 chr17 20658277 20658365 -64780115 + MER113 DNA MER1_type? 233 324 -197 1002 205 0 6 chr17 20658365 20658536 -64779944 + FAM SINE Alu 2 171 -4 2011 112 39 0 chr17 20658539 20658824 -64779656 + AluSg SINE Alu 1 296 -14 391 243 27 74 chr17 20658824 20658879 -64779601 + MER113 DNA MER1_type? 326 373 -148 230 0 0 32 chr17 20658887 20658918 -64779562 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 813 130 0 0 chr17 20658922 20659037 -64779443 - FLAM_C SINE Alu -18 115 1 431 202 53 0 chr17 20659038 20659132 -64779348 + MER113 DNA MER1_type? 361 459 -62 396 316 71 0 chr17 20659571 20659726 -64778754 + Charlie8 DNA MER1_type 1 166 -2251 1929 116 11 0 chr17 20659734 20660040 -64778440 + AluSq SINE Alu 9 317 0 22 35 0 0 chr17 20660058 20660087 -64778393 + AT_rich Low_complexity Low_complexity 1 29 0 2075 106 3 10 chr17 20660143 20660446 -64778034 - AluSq SINE Alu -12 301 1 850 202 35 6 chr17 20661006 20661179 -64777301 + MER45A DNA AcHobo 1 178 0 352 292 45 45 chr17 20661614 20661768 -64776712 - MIR SINE MIR -5 257 104 840 273 206 5 chr17 20661772 20662179 -64776301 + L2 LINE L2 2053 2541 -773 2273 146 28 0 chr17 20662197 20662553 -64775927 - MER47A DNA MER2_type 0 366 1 392 137 0 0 chr17 20662586 20662659 -64775821 + L1M4 LINE L1 5128 5200 -946 1950 154 0 3 chr17 20662661 20662973 -64775507 + AluSx SINE Alu 1 311 -1 581 285 109 18 chr17 20662973 20663257 -64775223 - L2 LINE L2 -857 2457 2148 195 42 0 0 chr17 20663323 20663347 -64775133 + (TCTCC)n Simple_repeat Simple_repeat 2 25 0 1721 178 10 0 chr17 20663347 20663712 -64774768 - AluJb SINE Alu -4 400 7 201 268 37 0 chr17 20663797 20663879 -64774601 - L2 LINE L2 -1189 2125 2041 231 36 0 0 chr17 20664495 20664523 -64773957 + (TTTC)n Simple_repeat Simple_repeat 2 29 0 1543 158 7 58 chr17 20664528 20664820 -64773660 - AluSx SINE Alu -35 277 1 189 121 0 0 chr17 20666693 20666726 -64771754 + (CAT)n Simple_repeat Simple_repeat 2 34 0 190 225 25 0 chr17 20668266 20668346 -64770134 + (CTTA)n Simple_repeat Simple_repeat 2 83 0 431 128 0 26 chr17 20670124 20670202 -64768278 - L1MD1 LINE L1 -4 6238 6163 903 168 12 6 chr17 20670202 20670363 -64768117 + FRAM SINE Alu 10 171 -5 1338 171 101 0 chr17 20670382 20670668 -64767812 + Tigger1 DNA MER2_type 1 315 -2103 651 138 0 0 chr17 20670669 20670763 -64767717 - AluJb SINE Alu -13 299 206 6193 133 21 4 chr17 20670765 20671770 -64766710 + Tigger1 DNA MER2_type 1006 2027 -391 1966 131 6 3 chr17 20672049 20672361 -64766119 - AluSq SINE Alu 0 313 1 1805 129 3 41 chr17 20672556 20672836 -64765644 + AluSx SINE Alu 1 269 -43 2437 46 3 3 chr17 20672836 20673138 -64765342 - AluY SINE Alu -9 302 1 1805 129 3 41 chr17 20673138 20673175 -64765305 + AluSx SINE Alu 269 306 -6 1969 118 6 34 chr17 20673184 20673323 -64765157 + AluSx SINE Alu 1 142 -170 2263 75 13 0 chr17 20673323 20673630 -64764850 + AluY SINE Alu 1 311 0 1969 118 6 34 chr17 20673630 20673811 -64764669 + AluSx SINE Alu 142 312 0 216 333 16 0 chr17 20673970 20674033 -64764447 + MIR SINE MIR 14 77 -185 190 214 145 99 chr17 20674036 20674167 -64764313 + MIR SINE MIR 44 180 -82 21 36 0 0 chr17 20675236 20675264 -64763216 + AT_rich Low_complexity Low_complexity 1 28 0 202 229 145 99 chr17 20675563 20675694 -64762786 - MIR SINE MIR -82 180 44 193 250 23 0 chr17 20675697 20675741 -64762739 - MIR SINE MIR -185 77 33 340 261 126 8 chr17 20676313 20676432 -64762048 + MIR SINE MIR 7 139 -123 536 279 142 60 chr17 20676445 20676811 -64761669 - L2 LINE L2 -20 3252 2857 508 298 53 27 chr17 20677069 20677219 -64761261 + MIR3 SINE MIR 33 185 -42 393 272 31 63 chr17 20678713 20678904 -64759576 + MIR SINE MIR 28 212 -50 4719 263 100 38 chr17 20680628 20680918 -64757562 + HAL1 LINE L1 64 335 -2172 2319 80 0 3 chr17 20680918 20681219 -64757261 + AluY SINE Alu 1 300 -11 4719 263 100 38 chr17 20681219 20681888 -64756592 + HAL1 LINE L1 335 962 -1545 1877 166 0 0 chr17 20681888 20682184 -64756296 - AluJb SINE Alu -16 296 1 4719 263 100 38 chr17 20682184 20683410 -64755070 + HAL1 LINE L1 962 2384 -123 3648 59 0 0 chr17 20683475 20683919 -64754561 + L1PA6 LINE L1 5711 6154 0 2261 84 0 10 chr17 20683924 20684220 -64754260 + AluY SINE Alu 1 293 -18 27 0 0 0 chr17 20684246 20684273 -64754207 + AT_rich Low_complexity Low_complexity 1 27 0 450 298 13 20 chr17 20684862 20685034 -64753446 + MIR SINE MIR 3 174 -88 320 276 118 7 chr17 20688721 20688873 -64749607 + MIR3 SINE MIR 33 201 -7 396 268 39 0 chr17 20688952 20689079 -64749401 + MIR SINE MIR 20 151 -111 213 349 73 0 chr17 20689598 20689707 -64748773 - MIR SINE MIR -95 167 51 291 208 38 85 chr17 20689779 20689885 -64748595 - MIR SINE MIR -64 144 44 5650 128 26 25 chr17 20690319 20691256 -64747224 - LTR5 LTR ERVK 0 969 32 436 258 65 0 chr17 20692669 20692793 -64745687 + MIR SINE MIR 88 219 -43 301 274 108 38 chr17 20692818 20693004 -64745476 - L2 LINE L2 -12 3301 3103 182 326 22 56 chr17 20694441 20694530 -64743950 + MIR SINE MIR 61 146 -62 224 250 48 77 chr17 20695814 20695918 -64742562 - MIR SINE MIR -60 148 48 277 314 43 31 chr17 20704176 20704434 -64734046 + L2 LINE L2 2498 2758 -556 294 303 110 0 chr17 20705648 20705757 -64732723 + MIR3 SINE MIR 81 201 -7 216 0 0 0 chr17 20706088 20706112 -64732368 + (CAGA)n Simple_repeat Simple_repeat 3 26 0 347 309 88 0 chr17 20706720 20706856 -64731624 + MIR SINE MIR 81 228 -34 2135 160 35 2 chr17 20707818 20708218 -64730262 + L1PB4 LINE L1 5539 5951 -205 1405 43 0 134 chr17 20708218 20708450 -64730030 - LTR14A LTR ERVK -143 201 1 198 253 27 40 chr17 20708517 20708592 -64729888 - MIR SINE MIR -133 129 56 510 294 76 0 chr17 20708642 20708826 -64729654 - L2 LINE L2 0 3313 3116 306 188 38 38 chr17 20708853 20708933 -64729547 - MER3 DNA MER1_type -5 204 125 2354 77 3 3 chr17 20708934 20709244 -64729236 + AluY SINE Alu 1 310 -1 216 333 16 0 chr17 20709341 20709404 -64729076 + MIR SINE MIR 14 77 -185 223 221 145 99 chr17 20709407 20709538 -64728942 + MIR SINE MIR 44 180 -82 21 36 0 0 chr17 20709837 20709865 -64728615 + AT_rich Low_complexity Low_complexity 1 28 0 183 214 145 99 chr17 20710935 20711066 -64727414 - MIR SINE MIR -82 180 44 216 333 16 0 chr17 20711069 20711132 -64727348 - MIR SINE MIR -185 77 14 2004 142 3 0 chr17 20711287 20711598 -64726882 - AluSx SINE Alu 0 312 1 1739 218 30 28 chr17 20711598 20711662 -64726818 - MLT1C-int LTR MaLR -752 619 557 1499 167 37 27 chr17 20711662 20711956 -64726524 - AluSx SINE Alu -15 297 1 1739 218 30 28 chr17 20711956 20712326 -64726154 - MLT1C-int LTR MaLR -814 557 184 1965 145 10 0 chr17 20712575 20712878 -64725602 + AluSq SINE Alu 1 306 -7 232 359 33 0 chr17 20713010 20713102 -64725378 + L2 LINE L2 3192 3286 -27 1205 241 87 34 chr17 20713738 20714174 -64724306 - MLT1C LTR MaLR 0 467 9 2082 63 4 7 chr17 20714599 20714896 -64723584 + AluY SINE Alu 17 312 0 2154 92 3 0 chr17 20715344 20715639 -64722841 - AluSg SINE Alu -14 296 1 269 342 0 51 chr17 20715658 20715816 -64722664 + C-rich Low_complexity Low_complexity 2 151 0 208 274 0 0 chr17 20715872 20715923 -64722557 + (CGG)n Simple_repeat Simple_repeat 2 52 0 243 365 14 7 chr17 20716294 20716442 -64722038 + G-rich Low_complexity Low_complexity 2 150 0 296 285 38 13 chr17 20716467 20716723 -64721757 + GA-rich Low_complexity Low_complexity 1 262 0 450 309 11 28 chr17 20716971 20717152 -64721328 + G-rich Low_complexity Low_complexity 3 180 0 402 317 0 38 chr17 20717204 20717390 -64721090 + G-rich Low_complexity Low_complexity 2 180 0 805 203 6 0 chr17 20718348 20718506 -64719974 + AluJb SINE Alu 1 159 -153 2155 76 45 0 chr17 20720167 20720455 -64718025 - AluY SINE Alu -10 301 1 402 68 17 0 chr17 20721518 20721577 -64716903 + HY3 scRNA scRNA 18 77 -24 1993 124 23 0 chr17 20722030 20722329 -64716151 + AluSx SINE Alu 3 308 -4 24 0 0 0 chr17 20722349 20722373 -64716107 + AT_rich Low_complexity Low_complexity 1 24 0 383 327 45 71 chr17 20722822 20723059 -64715421 + HAL1 LINE L1 904 1135 -1372 1848 89 4 0 chr17 20723059 20723307 -64715173 + AluY SINE Alu 1 249 -62 383 327 45 71 chr17 20723307 20723335 -64715145 + HAL1 LINE L1 1135 1162 -1345 219 381 77 5 chr17 20723343 20723537 -64714943 + L2 LINE L2 2542 2749 -565 3471 112 27 24 chr17 20723551 20724300 -64714180 - L1PA13 LINE L1 0 6154 5384 411 273 13 67 chr17 20724560 20724792 -64713688 + LTR41 LTR ERVL 469 712 -61 935 83 91 224 chr17 20724792 20724878 -64713602 - MER30 DNA MER1_type -1 229 133 1879 130 7 13 chr17 20724878 20725177 -64713303 + AluSx SINE Alu 1 297 -15 1981 115 27 14 chr17 20725179 20725474 -64713006 + AluSc SINE Alu 1 299 -10 935 83 91 224 chr17 20725474 20725648 -64712832 - MER30 DNA MER1_type -98 132 1 411 273 13 67 chr17 20725648 20725739 -64712741 + LTR41 LTR ERVL 712 761 -12 230 335 185 28 chr17 20725750 20726208 -64712272 + L2 LINE L2 2787 3312 -1 520 293 60 24 chr17 20726262 20726511 -64711969 + MIR SINE MIR 2 259 -3 1376 293 39 21 chr17 20730488 20731154 -64707326 - L1MC3 LINE L1 -1629 6156 5479 203 349 28 46 chr17 20735878 20735987 -64702493 + MIR SINE MIR 82 188 -74 1444 176 111 29 chr17 20736381 20736722 -64701758 - THE1C LTR MaLR 0 375 7 183 80 0 0 chr17 20737270 20737295 -64701185 + (TCCA)n Simple_repeat Simple_repeat 4 28 0 204 163 0 0 chr17 20737782 20737825 -64700655 + C-rich Low_complexity Low_complexity 4 46 0 246 273 0 34 chr17 20738124 20738212 -64700268 + GA-rich Low_complexity Low_complexity 6 90 0 683 292 36 24 chr17 20738267 20738517 -64699963 + MER89-int LTR ERV1 1407 1659 -5142 296 266 93 29 chr17 20739941 20740080 -64698400 + L1MEc LINE L1 1910 2057 -4339 291 54 0 0 chr17 20740108 20740145 -64698335 + (TA)n Simple_repeat Simple_repeat 2 38 0 1479 189 3 14 chr17 20740160 20740445 -64698035 - AluJb SINE Alu -30 282 1 882 241 13 47 chr17 20740500 20740732 -64697748 + MER58A DNA MER1_type 1 224 0 415 278 95 18 chr17 20740734 20740903 -64697577 - L2 LINE L2 -653 2661 2480 2364 73 0 16 chr17 20740974 20741289 -64697191 + AluY SINE Alu 1 310 -1 1785 157 29 76 chr17 20741751 20742160 -64696320 + MLT1B LTR MaLR 1 390 0 296 209 12 31 chr17 20743090 20743253 -64695227 + CT-rich Low_complexity Low_complexity 2 161 0 1877 144 0 13 chr17 20743425 20743723 -64694757 - AluJb SINE Alu -16 296 3 1629 133 133 15 chr17 20743724 20743988 -64694492 - AluJo SINE Alu -7 295 1 422 241 76 21 chr17 20743989 20744134 -64694346 - MER106A DNA MER1_type -79 157 5 2099 107 0 0 chr17 20744185 20744475 -64694005 - AluSx SINE Alu -15 297 8 238 211 13 40 chr17 20744712 20744788 -64693692 + (CCCCG)n Simple_repeat Simple_repeat 1 74 0 232 239 87 76 chr17 20746116 20746300 -64692180 + L2 LINE L2 2870 3055 -217 828 283 36 12 chr17 20748163 20748410 -64690070 + MIR SINE MIR 9 261 -1 491 283 51 0 chr17 20748397 20748535 -64689945 + L2 LINE L2 3169 3313 0 * 1827 151 0 13 chr17 20749079 20749377 -64689103 - AluJb SINE Alu -16 296 3 1400 150 135 22 chr17 20749378 20749645 -64688835 - AluJo SINE Alu -15 297 1 2229 97 0 0 chr17 20750927 20751225 -64687255 - AluSx SINE Alu -14 298 1 2274 103 0 0 chr17 20752167 20752477 -64686003 - AluSx SINE Alu -2 310 1 1342 181 46 46 chr17 20752545 20752871 -64685609 + MLT1D LTR MaLR 180 505 0 1826 107 38 0 chr17 20753139 20753400 -64685080 - AluSx SINE Alu -9 303 33 1011 76 8 0 chr17 20753400 20753531 -64684949 - AluSq/x SINE Alu -181 132 1 1399 202 4 4 chr17 20753550 20753807 -64684673 + AluJo SINE Alu 43 299 -13 1880 222 30 14 chr17 20753816 20754249 -64684231 - MLT1D LTR MaLR -53 452 13 242 108 27 0 chr17 20754251 20754288 -64684192 - MLT1D LTR MaLR -467 38 1 2562 58 0 0 chr17 20754345 20754656 -64683824 - AluY SINE Alu 0 311 1 953 118 0 7 chr17 20754656 20754792 -64683688 - AluSq/x SINE Alu -177 135 1 1829 136 25 0 chr17 20754792 20755078 -64683402 - AluSq SINE Alu -9 304 12 2061 132 3 0 chr17 20755098 20755394 -64683086 - AluSq SINE Alu -10 303 7 307 276 92 43 chr17 20755410 20755595 -64682885 + MLT1K LTR MaLR 349 542 -46 729 297 52 0 chr17 20755617 20755849 -64682631 - MIR SINE MIR -11 251 8 623 274 18 50 chr17 20755858 20755923 -64682557 - LTR16C LTR ERVL -10 481 415 2124 120 10 0 chr17 20755923 20756224 -64682256 - AluSx SINE Alu 0 312 9 623 274 18 50 chr17 20756224 20756377 -64682103 - LTR16C LTR ERVL -76 415 270 743 222 149 0 chr17 20756596 20756790 -64681690 - MLT1G3 LTR MaLR -230 300 78 257 204 0 20 chr17 20756790 20756839 -64681641 + polypyrimidine Low_complexity Low_complexity 1 48 0 2158 129 0 0 chr17 20756839 20757148 -64681332 - AluSg SINE Alu -1 309 1 501 206 28 0 chr17 20757149 20757290 -64681190 + CT-rich Low_complexity Low_complexity 2 146 0 659 196 22 73 chr17 20757308 20757487 -64680993 + L1 LINE L1 4821 4990 -1156 1623 180 27 13 chr17 20757508 20757808 -64680672 - AluJb SINE Alu -8 304 1 2109 126 0 7 chr17 20757820 20758130 -64680350 - AluSx SINE Alu 0 312 5 225 279 59 0 chr17 20758159 20758227 -64680253 - MLT1H LTR MaLR -408 141 70 357 235 17 59 chr17 20758231 20758350 -64680130 + MLT1J LTR MaLR 388 501 -10 2095 78 7 11 chr17 20758587 20758893 -64679587 + AluSg SINE Alu 1 305 0 800 150 7 43 chr17 20759103 20759243 -64679237 + AluJo SINE Alu 1 135 -177 1764 176 3 22 chr17 20759243 20759556 -64678924 + AluJo SINE Alu 1 307 -5 909 246 55 123 chr17 20759581 20759729 -64678751 + L1MEc LINE L1 2152 2309 -3906 2332 91 0 0 chr17 20759729 20760038 -64678442 + AluY SINE Alu 1 309 -2 909 246 55 123 chr17 20760038 20760248 -64678232 + L1MEc LINE L1 2309 2402 -3813 1799 143 14 0 chr17 20760248 20760528 -64677952 + AluSx SINE Alu 29 312 0 909 246 55 123 chr17 20760528 20760853 -64677627 + L1MEc LINE L1 2402 2748 -3467 785 197 0 7 chr17 20760890 20761032 -64677448 - AluJo SINE Alu -52 260 120 815 151 14 43 chr17 20761075 20761214 -64677266 - AluJo SINE Alu -176 136 2 2364 85 0 0 chr17 20761233 20761538 -64676942 + AluSc SINE Alu 1 305 -4 1849 125 12 60 chr17 20761552 20761871 -64676609 + AluSx SINE Alu 1 304 -8 417 270 133 0 chr17 20761877 20762006 -64676474 + L1MC/D LINE L1 5488 5634 -522 2074 132 0 0 chr17 20762026 20762322 -64676158 + AluSx SINE Alu 1 296 -16 1989 126 0 40 chr17 20762324 20762469 -64676011 + AluSx SINE Alu 1 150 -162 2313 73 3 0 chr17 20762469 20762772 -64675708 + AluY SINE Alu 1 304 -7 1989 126 0 40 chr17 20762772 20762951 -64675529 + AluSx SINE Alu 150 312 0 2132 101 0 10 chr17 20762973 20763108 -64675372 + AluSx SINE Alu 1 136 -176 2249 88 0 0 chr17 20763108 20763404 -64675076 + AluY SINE Alu 1 296 -15 2132 101 0 10 chr17 20763404 20763566 -64674914 + AluSx SINE Alu 136 295 -17 1811 149 16 13 chr17 20763569 20763878 -64674602 - AluJb SINE Alu 0 312 3 681 124 0 0 chr17 20764025 20764130 -64674350 - AluSg/x SINE Alu -3 307 203 347 139 4 2 chr17 20764143 20764212 -64674268 + Alu SINE Alu 244 302 0 342 271 200 21 chr17 20765135 20765275 -64673205 - MIR SINE MIR -80 182 18 2188 114 0 9 chr17 20765549 20765864 -64672616 + AluSx SINE Alu 1 312 0 258 247 234 0 chr17 20765985 20766062 -64672418 + MIR SINE MIR 52 146 -116 1566 164 13 7 chr17 20766367 20766666 -64671814 - AluY SINE Alu -10 301 1 2187 106 0 13 chr17 20766669 20766844 -64671636 - AluSx SINE Alu -5 307 136 2056 112 23 3 chr17 20766844 20767149 -64671331 - AluSx SINE Alu -1 311 1 2187 106 0 13 chr17 20767149 20767284 -64671196 - AluSx SINE Alu -176 136 1 346 204 11 11 chr17 20767287 20767375 -64671105 - FLAM_A SINE Alu 0 133 46 261 233 159 91 chr17 20767383 20767559 -64670921 + L2 LINE L2 2886 3073 -240 1827 156 0 9 chr17 20767582 20767897 -64670583 - AluJb SINE Alu 0 312 1 1139 196 115 63 chr17 20767762 20767904 -64670576 - AluJo SINE Alu -1 301 168 2118 113 0 3 chr17 20767904 20768206 -64670274 - AluSx SINE Alu -11 301 1 2045 133 0 0 chr17 20768212 20768506 -64669974 - AluSc SINE Alu -15 294 1 1556 157 88 7 chr17 20768506 20768780 -64669700 - AluSx SINE Alu -16 296 1 1139 196 115 63 chr17 20768780 20768915 -64669565 - AluJo SINE Alu -137 165 1 1929 113 57 0 chr17 20768916 20769198 -64669282 - AluSg SINE Alu -12 298 1 1817 154 0 4 chr17 20769272 20769552 -64668928 - AluJb SINE Alu -33 279 1 2097 103 7 0 chr17 20769671 20769962 -64668518 - AluSc SINE Alu -16 293 1 1852 73 114 15 chr17 20769978 20770251 -64668229 + AluY SINE Alu 1 300 -11 594 161 331 0 chr17 20770261 20770391 -64668089 - AluJo SINE Alu -138 174 2 2198 107 0 3 chr17 20770805 20771114 -64667366 - AluSc SINE Alu -1 308 1 1968 107 38 3 chr17 20771481 20771770 -64666710 + AluSx SINE Alu 1 299 -13 1766 117 53 0 chr17 20771776 20772073 -64666407 + AluY SINE Alu 5 315 0 1245 113 0 5 chr17 20772544 20772723 -64665757 - AluSq SINE Alu -1 312 134 2474 59 0 3 chr17 20772723 20773026 -64665454 - AluY SINE Alu -9 302 1 2390 65 0 37 chr17 20773033 20773356 -64665124 - AluY SINE Alu 0 311 1 2149 102 0 13 chr17 20773499 20773668 -64664812 - AluSq SINE Alu -12 301 136 2363 71 3 7 chr17 20773668 20773978 -64664502 - AluSp SINE Alu -4 309 1 2149 102 0 13 chr17 20773978 20774113 -64664367 - AluSq SINE Alu -177 136 1 216 123 18 35 chr17 20775184 20775241 -64663239 + CT-rich Low_complexity Low_complexity 1 56 0 1639 160 33 26 chr17 20775270 20775576 -64662904 - AluJb SINE Alu -4 308 1 2353 50 7 3 chr17 20775668 20775966 -64662514 + AluY SINE Alu 1 299 -12 1612 175 7 17 chr17 20775969 20776266 -64662214 + AluJo SINE Alu 1 294 -18 2035 100 0 55 chr17 20776326 20776637 -64661843 - AluSc SINE Alu -15 294 1 2224 83 6 19 chr17 20776668 20776980 -64661500 + AluY SINE Alu 1 308 -3 25 31 0 0 chr17 20777000 20777032 -64661448 + AT_rich Low_complexity Low_complexity 1 32 0 2302 93 0 0 chr17 20777081 20777382 -64661098 + AluSx SINE Alu 1 301 -11 1490 188 33 0 chr17 20777479 20777750 -64660730 - AluJo SINE Alu -32 280 1 2343 39 0 11 chr17 20777750 20778067 -64660413 - AluY SINE Alu 0 314 1 2217 108 3 0 chr17 20778069 20778375 -64660105 - AluSp SINE Alu -6 307 1 1471 213 3 3 chr17 20778382 20778669 -64659811 - AluJo SINE Alu -17 295 9 2253 76 0 0 chr17 20778685 20778976 -64659504 - AluSx SINE Alu -21 291 1 764 134 7 42 chr17 20778976 20779118 -64659362 - L1MB2 LINE L1 -220 5951 5815 1745 148 43 13 chr17 20779118 20779421 -64659059 - AluJo SINE Alu 0 312 1 2254 79 3 10 chr17 20779894 20780198 -64658282 + AluSp SINE Alu 1 302 -11 1681 184 29 9 chr17 20781162 20781504 -64656976 + MER47A DNA MER2_type 18 366 0 499 260 92 23 chr17 20781958 20782131 -64656349 - Zaphod DNA AcHobo -2146 1885 1701 2004 137 0 3 chr17 20782131 20782438 -64656042 + AluSq SINE Alu 1 306 -7 992 87 0 0 chr17 20782438 20782565 -64655915 + AluSg SINE Alu 1 127 -183 2087 110 3 0 chr17 20782566 20782856 -64655624 + AluSx SINE Alu 11 301 -11 198 0 0 0 chr17 20783514 20783536 -64654944 + (T)n Simple_repeat Simple_repeat 1 22 0 838 152 0 8 chr17 20783595 20783727 -64654753 - FLAM_C SINE Alu 0 133 3 2011 135 0 0 chr17 20784173 20784476 -64654004 - AluJb SINE Alu -9 303 1 2132 121 3 0 chr17 20784482 20784787 -64653693 - AluSq SINE Alu -7 306 1 2177 144 30 62 chr17 20784900 20785135 -64653345 - L1MA7 LINE L1 0 6291 6050 198 0 0 0 chr17 20785135 20785157 -64653323 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 2225 104 0 0 chr17 20785160 20785459 -64653021 - AluSx SINE Alu -12 300 2 2177 144 30 62 chr17 20785459 20785500 -64652980 - L1MA7 LINE L1 -243 6048 6007 1969 122 10 0 chr17 20785500 20785788 -64652692 + AluJb SINE Alu 1 291 -21 2177 144 30 62 chr17 20785788 20786088 -64652392 - L1MA7 LINE L1 -284 6007 5621 441 310 111 18 chr17 20786091 20786317 -64652163 - L1M4 LINE L1 -1155 4991 4745 357 271 85 20 chr17 20786395 20786439 -64652041 - L1M4 LINE L1 -1768 4378 4338 2392 70 0 25 chr17 20786439 20786755 -64651725 - AluY SINE Alu -3 308 1 357 271 85 20 chr17 20786755 20786980 -64651500 - L1M4 LINE L1 -1808 4338 4072 2328 97 0 0 chr17 20788254 20788564 -64649916 + AluY SINE Alu 1 310 -1 10104 39 15 105 chr17 20789047 20790570 -64647910 - SVA Other Other 0 1386 1 852 226 34 34 chr17 20790811 20791045 -64647435 + MIR SINE MIR 28 261 -1 1653 159 0 4 chr17 20791157 20791428 -64647052 - AluJb SINE Alu -19 293 24 2031 138 0 0 chr17 20791433 20791730 -64646750 - AluSq SINE Alu -16 297 1 2410 79 0 0 chr17 20791814 20792117 -64646363 - AluSg SINE Alu -7 303 1 198 323 83 10 chr17 20793422 20793518 -64644962 - L3 LINE CR1 -453 1124 1022 1786 144 0 50 chr17 20793725 20793872 -64644608 + AluJb SINE Alu 1 125 -187 2156 95 0 10 chr17 20793872 20794167 -64644313 + AluSx SINE Alu 1 292 -20 1786 144 0 50 chr17 20794167 20794338 -64644142 + AluJb SINE Alu 125 303 -9 2121 120 3 13 chr17 20794345 20794661 -64643819 + AluSq SINE Alu 1 313 0 272 267 68 48 chr17 20795480 20795626 -64642854 + MER91B DNA MER1_type 37 185 -5 1902 98 29 138 chr17 20795962 20796340 -64642140 + MER1B DNA MER1_type 1 337 0 367 290 91 45 chr17 20796603 20796779 -64641701 - MIR SINE MIR -33 229 46 2149 116 0 0 chr17 20797678 20797972 -64640508 + AluSx SINE Alu 1 294 -18 1711 127 81 3 chr17 20797975 20798258 -64640222 + AluSc SINE Alu 1 305 -4 2254 71 3 10 chr17 20802039 20802336 -64636144 - AluSq SINE Alu -18 295 1 2315 95 0 0 chr17 20805803 20806107 -64632373 + AluY SINE Alu 1 304 -7 380 190 134 145 chr17 20806183 20806268 -64632212 + MIR SINE MIR 65 149 -113 1627 172 29 0 chr17 20806268 20806547 -64631933 - AluJo SINE Alu -16 296 10 380 190 134 145 chr17 20806547 20806640 -64631840 + MIR SINE MIR 149 241 -21 184 280 40 90 chr17 20806693 20806793 -64631687 + L2 LINE L2 3169 3263 -50 200 344 62 31 chr17 20807008 20807168 -64631312 - L2 LINE L2 -8 3264 3100 295 227 52 31 chr17 20807900 20807997 -64630483 - MIR SINE MIR -126 136 38 1710 154 42 0 chr17 20808120 20808405 -64630075 + AluSg SINE Alu 14 310 0 184 246 109 80 chr17 20808627 20808765 -64629715 - L3 LINE CR1 -109 1468 1327 256 308 0 13 chr17 20809332 20809410 -64629070 + MER5B DNA MER1_type 64 140 -38 2248 104 0 0 chr17 20809410 20809718 -64628762 + AluSq SINE Alu 1 308 -5 399 256 44 29 chr17 20809756 20809893 -64628587 - MIR3 SINE MIR -33 175 37 189 264 19 0 chr17 20813622 20813675 -64624805 + L2 LINE L2 2586 2639 -675 2070 109 26 3 chr17 20814975 20815279 -64623201 - AluSq SINE Alu -2 311 1 389 283 68 61 chr17 20816233 20816512 -64621968 + L2 LINE L2 3017 3297 -16 2000 127 0 0 chr17 20816520 20816811 -64621669 + AluSx SINE Alu 1 291 -21 2376 81 0 0 chr17 20816814 20817112 -64621368 + AluY SINE Alu 1 298 -13 2907 162 34 68 chr17 20817328 20817660 -64620820 - L1MB5 LINE L1 -13 6161 5819 2172 107 0 10 chr17 20817660 20817969 -64620511 - AluSg SINE Alu -4 306 1 2907 162 34 68 chr17 20817969 20818105 -64620375 - L1MB5 LINE L1 -355 5819 5680 2435 60 0 3 chr17 20818105 20818407 -64620073 + AluY SINE Alu 2 302 -9 2907 162 34 68 chr17 20818407 20818447 -64620033 - L1MB5 LINE L1 -494 5680 5640 1875 114 7 4 chr17 20818447 20818719 -64619761 - AluSx SINE Alu -5 307 35 2907 162 34 68 chr17 20818719 20819050 -64619430 - L1MB5 LINE L1 -534 5640 5343 263 266 0 0 chr17 20819047 20819111 -64619369 - L1MB5 LINE L1 -1025 5121 5058 * 2180 103 0 28 chr17 20819863 20820182 -64618298 - AluSx SINE Alu 0 312 3 1663 165 24 0 chr17 20820182 20820473 -64618007 - AluSx SINE Alu -9 303 6 2106 106 0 0 chr17 20820479 20820795 -64617685 - AluY SINE Alu 0 317 2 1438 170 24 34 chr17 20821447 20821741 -64616739 + AluJb SINE Alu 1 291 -21 2046 127 3 0 chr17 20821872 20822193 -64616287 - AluSq SINE Alu 0 313 1 2292 64 0 0 chr17 20822246 20822556 -64615924 - AluY SINE Alu 0 310 1 207 182 0 0 chr17 20822599 20822632 -64615848 + (CGTG)n Simple_repeat Simple_repeat 1 33 0 350 346 25 31 chr17 20823109 20823271 -64615209 + MIR SINE MIR 59 219 -43 180 0 0 0 chr17 20823344 20823364 -64615116 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2186 96 7 0 chr17 20823844 20824135 -64614345 + AluSx SINE Alu 1 293 -19 3631 178 43 54 chr17 20824179 20825145 -64613335 - LTR5 LTR ERVK -13 956 1 196 284 91 34 chr17 20826522 20826610 -64611870 - MIR3 SINE MIR -11 197 105 209 274 42 42 chr17 20826796 20826891 -64611589 - MIR3 SINE MIR -106 102 8 363 265 130 25 chr17 20827050 20827212 -64611268 - MIR SINE MIR -21 241 63 1232 188 9 0 chr17 20827338 20827561 -64610919 + AluJb SINE Alu 84 308 -4 2100 124 7 0 chr17 20827686 20827992 -64610488 - AluSc SINE Alu 0 309 2 465 172 0 43 chr17 20828067 20828160 -64610320 + FLAM_A SINE Alu 53 141 -1 1218 192 0 22 chr17 20828736 20828965 -64609515 - AluJo SINE Alu -88 224 1 23 0 0 0 chr17 20828978 20829001 -64609479 + AT_rich Low_complexity Low_complexity 1 23 0 7074 64 24 19 chr17 20829038 20830687 -64607793 - SVA Other Other -683 1386 5 2106 93 4 0 chr17 20830687 20830965 -64607515 - AluSp SINE Alu -34 279 1 2175 89 0 0 chr17 20831504 20831809 -64606671 - AluSc SINE Alu 0 305 1 2281 71 3 3 chr17 20832043 20832338 -64606142 + AluY SINE Alu 1 295 -16 2048 103 17 0 chr17 20832350 20832641 -64605839 + AluSq SINE Alu 1 296 -17 2055 104 21 0 chr17 20832661 20832948 -64605532 + AluSx SINE Alu 1 293 -19 705 157 0 0 chr17 20832960 20833062 -64605418 + FLAM_C SINE Alu 2 103 -40 2215 114 0 0 chr17 20833480 20833788 -64604692 + AluSc SINE Alu 1 308 -1 450 207 63 0 chr17 20834072 20834183 -64604297 + MER33 DNA MER1_type 34 151 -173 2201 86 0 0 chr17 20834214 20834493 -64603987 + AluSg SINE Alu 2 280 -30 1643 191 7 3 chr17 20834521 20834825 -64603655 + AluJb SINE Alu 1 305 -7 306 183 0 33 chr17 20836074 20836096 -64602384 - L1ME4a LINE L1 -2 6119 6098 2079 120 3 0 chr17 20836096 20836387 -64602093 + AluSc SINE Alu 1 292 -17 306 183 0 33 chr17 20836387 20836424 -64602056 - L1ME4a LINE L1 -23 6098 6062 267 301 166 16 chr17 20836453 20836646 -64601834 - L1ME LINE L1 -314 5807 5586 421 249 195 32 chr17 20837569 20837790 -64600690 - MIR SINE MIR -5 257 1 231 244 191 9 chr17 20837898 20838013 -64600467 + Charlie8 DNA MER1_type 86 221 -2196 789 174 0 0 chr17 20838415 20838530 -64599950 + AluJo/FLAM SINE Alu 1 115 -187 453 139 0 15 chr17 20838531 20838784 -64599696 + AluSq SINE Alu 2 317 0 2124 106 0 7 chr17 20838793 20839085 -64599395 + AluSx SINE Alu 1 290 -22 289 188 130 0 chr17 20839103 20839172 -64599308 + AluSp SINE Alu 149 226 -77 35 33 0 17 chr17 20839628 20839666 -64598814 + AT_rich Low_complexity Low_complexity 1 39 -20 1900 134 31 0 chr17 20839666 20839956 -64598524 + AluSg SINE Alu 1 299 -11 35 33 0 17 chr17 20839956 20839977 -64598503 + AT_rich Low_complexity Low_complexity 39 59 0 374 194 126 10 chr17 20839977 20840080 -64598400 - L1MB8 LINE L1 -1 6177 6063 2100 102 6 19 chr17 20840081 20840395 -64598085 - AluSq SINE Alu -3 310 1 1210 178 87 73 chr17 20840405 20840554 -64597926 - AluJo SINE Alu -12 290 134 2103 116 26 0 chr17 20840554 20840856 -64597624 - AluSx SINE Alu -2 310 1 1210 178 87 73 chr17 20840856 20840992 -64597488 - AluJo SINE Alu -168 134 1 1585 190 33 2 chr17 20841012 20841024 -64597456 - L1MB8 LINE L1 -430 5754 5744 1668 106 0 0 chr17 20841024 20841250 -64597230 + AluSq SINE Alu 1 226 -87 1585 190 33 2 chr17 20841250 20841561 -64596919 - L1MB8 LINE L1 -440 5744 5428 1871 121 6 46 chr17 20841561 20841884 -64596596 - AluY SINE Alu -1 310 1 1585 190 33 2 chr17 20841884 20841905 -64596575 - L1MB8 LINE L1 -756 5428 5409 1607 115 7 33 chr17 20842011 20842102 -64596378 + AluSx SINE Alu 49 141 -171 2362 64 3 10 chr17 20842102 20842415 -64596065 + AluY SINE Alu 1 311 0 1607 115 7 33 chr17 20842415 20842593 -64595887 + AluSx SINE Alu 141 311 -1 216 333 16 0 chr17 20842746 20842809 -64595671 + MIR SINE MIR 14 77 -185 214 206 145 99 chr17 20842812 20842943 -64595537 + MIR SINE MIR 44 180 -82 21 36 0 0 chr17 20844013 20844041 -64594439 + AT_rich Low_complexity Low_complexity 1 28 0 223 221 145 99 chr17 20844340 20844471 -64594009 - MIR SINE MIR -82 180 44 193 250 23 0 chr17 20844474 20844518 -64593962 - MIR SINE MIR -185 77 33 340 261 126 8 chr17 20845090 20845209 -64593271 + MIR SINE MIR 7 139 -123 524 281 142 60 chr17 20845222 20845588 -64592892 - L2 LINE L2 -20 3252 2857 503 291 53 27 chr17 20845846 20845996 -64592484 + MIR3 SINE MIR 33 185 -42 202 306 0 0 chr17 20846398 20846483 -64591997 + (CCA)n Simple_repeat Simple_repeat 3 87 0 372 278 31 63 chr17 20847494 20847685 -64590795 + MIR SINE MIR 28 212 -50 4760 260 94 40 chr17 20849448 20849715 -64588765 + HAL1 LINE L1 102 353 -2154 2300 83 0 3 chr17 20849715 20850016 -64588464 + AluY SINE Alu 1 300 -11 4760 260 94 40 chr17 20850016 20850685 -64587795 + HAL1 LINE L1 353 984 -1523 1872 166 0 0 chr17 20850685 20850981 -64587499 - AluJb SINE Alu -16 296 1 4760 260 94 40 chr17 20850981 20852209 -64586271 + HAL1 LINE L1 984 2384 -123 3570 58 0 5 chr17 20852275 20852720 -64585760 + L1PA6 LINE L1 5711 6153 -1 2197 88 10 10 chr17 20852725 20853030 -64585450 + AluY SINE Alu 1 305 -6 27 0 0 0 chr17 20853056 20853083 -64585397 + AT_rich Low_complexity Low_complexity 1 27 0 450 298 13 20 chr17 20853672 20853844 -64584636 + MIR SINE MIR 3 174 -88 320 276 118 7 chr17 20857531 20857683 -64580797 + MIR3 SINE MIR 33 201 -7 392 258 39 8 chr17 20857762 20857890 -64580590 + MIR SINE MIR 20 151 -111 213 349 73 0 chr17 20858409 20858518 -64579962 - MIR SINE MIR -95 167 51 291 208 38 85 chr17 20858590 20858696 -64579784 - MIR SINE MIR -64 144 44 5650 128 26 25 chr17 20859130 20860067 -64578413 - LTR5 LTR ERVK 0 969 32 436 258 65 0 chr17 20861480 20861604 -64576876 + MIR SINE MIR 88 219 -43 301 274 108 38 chr17 20861629 20861815 -64576665 - L2 LINE L2 -12 3301 3103 182 326 22 56 chr17 20863252 20863341 -64575139 + MIR SINE MIR 61 146 -62 224 250 48 77 chr17 20864625 20864729 -64573751 - MIR SINE MIR -60 148 48 296 306 43 31 chr17 20872991 20873249 -64565231 + L2 LINE L2 2498 2758 -556 283 312 110 0 chr17 20874463 20874572 -64563908 + MIR3 SINE MIR 81 201 -7 216 0 0 0 chr17 20874904 20874928 -64563552 + (CAGA)n Simple_repeat Simple_repeat 3 26 0 355 309 88 0 chr17 20875543 20875679 -64562801 + MIR SINE MIR 81 228 -34 192 269 0 0 chr17 20876503 20876555 -64561925 + L2 LINE L2 3007 3058 -214 2141 158 35 2 chr17 20876644 20877044 -64561436 + L1PB4 LINE L1 5539 5951 -205 1418 39 0 134 chr17 20877044 20877276 -64561204 - LTR14A LTR ERVK -143 201 1 198 253 27 40 chr17 20877344 20877419 -64561061 - MIR SINE MIR -133 129 56 534 288 76 0 chr17 20877469 20877653 -64560827 - L2 LINE L2 0 3313 3116 306 188 38 38 chr17 20877680 20877760 -64560720 - MER3 DNA MER1_type -5 204 125 2332 78 3 3 chr17 20877761 20878069 -64560411 + AluY SINE Alu 1 308 -3 216 333 16 0 chr17 20878161 20878224 -64560256 + MIR SINE MIR 14 77 -185 223 223 146 92 chr17 20878227 20878357 -64560123 + MIR SINE MIR 44 180 -82 21 36 0 0 chr17 20878657 20878685 -64559795 + AT_rich Low_complexity Low_complexity 1 28 0 190 214 145 99 chr17 20879757 20879888 -64558592 - MIR SINE MIR -82 180 44 216 333 16 0 chr17 20879891 20879954 -64558526 - MIR SINE MIR -185 77 14 2027 138 3 0 chr17 20880117 20880428 -64558052 - AluSx SINE Alu 0 312 1 1676 230 29 27 chr17 20880428 20880492 -64557988 - MLT1C-int LTR MaLR -749 622 560 1483 174 37 27 chr17 20880492 20880786 -64557694 - AluSx SINE Alu -15 297 1 1676 230 29 27 chr17 20880786 20881156 -64557324 - MLT1C-int LTR MaLR -811 560 184 1979 144 10 0 chr17 20881411 20881716 -64556764 + AluSq SINE Alu 1 308 -5 232 359 33 0 chr17 20881848 20881940 -64556540 + L2 LINE L2 3192 3286 -27 1218 239 87 34 chr17 20882583 20883019 -64555461 - MLT1C LTR MaLR 0 467 9 2168 62 10 7 chr17 20883445 20883734 -64554746 + AluY SINE Alu 17 306 -5 2119 91 3 3 chr17 20884206 20884502 -64553978 - AluSg SINE Alu -14 296 1 269 342 0 51 chr17 20884521 20884679 -64553801 + C-rich Low_complexity Low_complexity 2 151 0 208 274 0 0 chr17 20884735 20884786 -64553694 + (CGG)n Simple_repeat Simple_repeat 2 52 0 222 292 22 11 chr17 20885216 20885305 -64553175 + G-rich Low_complexity Low_complexity 1 90 0 248 322 11 35 chr17 20885391 20885565 -64552915 + G-rich Low_complexity Low_complexity 2 171 0 261 349 17 11 chr17 20885681 20885856 -64552624 + GA-rich Low_complexity Low_complexity 4 179 0 367 287 0 48 chr17 20885858 20886096 -64552384 + G-rich Low_complexity Low_complexity 1 226 0 342 339 6 18 chr17 20886041 20886212 -64552268 + GA-rich Low_complexity Low_complexity 1 169 0 * 879 184 6 0 chr17 20887194 20887352 -64551128 + AluJb SINE Alu 1 159 -153 2190 83 41 0 chr17 20889009 20889299 -64549181 - AluYa5 SINE Alu -9 302 1 402 68 17 0 chr17 20890362 20890421 -64548059 + HY3 scRNA scRNA 18 77 -24 1993 124 23 0 chr17 20890878 20891177 -64547303 + AluSx SINE Alu 3 308 -4 24 0 0 0 chr17 20891197 20891221 -64547259 + AT_rich Low_complexity Low_complexity 1 24 0 382 332 45 68 chr17 20891669 20891906 -64546574 + HAL1 LINE L1 904 1136 -1371 1872 85 4 0 chr17 20891906 20892154 -64546326 + AluY SINE Alu 1 249 -62 382 332 45 68 chr17 20892154 20892181 -64546299 + HAL1 LINE L1 1136 1162 -1345 202 380 77 10 chr17 20892190 20892385 -64546095 + L2 LINE L2 2542 2749 -565 4028 137 71 18 chr17 20892408 20893152 -64545328 - L1PA10 LINE L1 0 6168 5385 422 250 9 81 chr17 20893413 20893646 -64544834 + LTR41 LTR ERVL 469 717 -78 1012 75 90 232 chr17 20893646 20893732 -64544748 - MER30 DNA MER1_type -1 229 132 1900 127 7 13 chr17 20893732 20894031 -64544449 + AluSx SINE Alu 1 297 -15 1991 115 27 10 chr17 20894033 20894328 -64544152 + AluSc SINE Alu 1 300 -9 1012 75 90 232 chr17 20894328 20894505 -64543975 - MER30 DNA MER1_type -99 131 1 422 250 9 81 chr17 20894505 20894607 -64543873 + LTR41 LTR ERVL 717 791 -4 259 326 186 33 chr17 20894609 20895068 -64543412 + L2 LINE L2 2787 3312 -1 576 285 43 24 chr17 20895122 20895375 -64543105 + MIR SINE MIR 2 259 -3 1376 293 39 21 chr17 20899354 20900020 -64538460 - L1MC3 LINE L1 -1629 6156 5479 203 349 28 46 chr17 20904748 20904857 -64533623 + MIR SINE MIR 82 188 -74 1421 179 111 29 chr17 20905251 20905592 -64532888 - THE1C LTR MaLR 0 375 7 183 80 0 0 chr17 20906140 20906165 -64532315 + (TCCA)n Simple_repeat Simple_repeat 4 28 0 223 167 24 0 chr17 20906652 20906694 -64531786 + C-rich Low_complexity Low_complexity 4 46 0 228 318 0 11 chr17 20906993 20907081 -64531399 + GA-rich Low_complexity Low_complexity 2 88 0 711 292 36 24 chr17 20907134 20907384 -64531096 + MER89-int LTR ERV1 1407 1659 -5142 323 261 134 32 chr17 20908812 20908969 -64529511 + L1MEc LINE L1 1916 2088 -4308 435 63 0 0 chr17 20908972 20909035 -64529445 + (TA)n Simple_repeat Simple_repeat 2 64 0 1474 193 3 14 chr17 20909048 20909333 -64529147 - AluJb SINE Alu -30 282 1 1322 6 0 6 chr17 20909360 20909516 -64528964 + (TCTCCC)n Simple_repeat Simple_repeat 1 155 0 5667 66 62 9 chr17 20909538 20910650 -64527830 + SVA Other Other 2 1386 0 23 0 0 0 chr17 20910685 20910708 -64527772 + AT_rich Low_complexity Low_complexity 1 23 0 831 245 13 52 chr17 20910748 20910981 -64527499 + MER58A DNA MER1_type 1 224 0 496 255 98 0 chr17 20910983 20911136 -64527344 - L2 LINE L2 -653 2661 2494 2301 89 0 13 chr17 20911226 20911540 -64526940 + AluY SINE Alu 1 310 -1 1722 158 29 78 chr17 20912006 20912416 -64526064 + MLT1B LTR MaLR 1 390 0 361 209 7 27 chr17 20913337 20913485 -64524995 + CT-rich Low_complexity Low_complexity 1 145 0 180 156 16 47 chr17 20913531 20913595 -64524885 + CT-rich Low_complexity Low_complexity 5 66 0 2039 179 13 98 chr17 20913693 20914018 -64524462 + L1MB5 LINE L1 5380 5644 -530 1815 115 0 7 chr17 20914018 20914285 -64524195 + L1PB1 LINE L1 5883 6150 -1 2039 179 13 98 chr17 20914285 20914489 -64523991 + L1MB5 LINE L1 5644 5864 -310 1248 229 6 16 chr17 20914518 20914832 -64523648 + AluJo SINE Alu 1 311 -1 2055 129 0 0 chr17 20914839 20915134 -64523346 + AluSc SINE Alu 7 301 -8 2345 71 19 84 chr17 20915738 20916105 -64522375 - LTR14A LTR ERVK -1 343 1 187 189 68 81 chr17 20916173 20916247 -64522233 - MIR SINE MIR -78 130 58 511 288 76 0 chr17 20916298 20916482 -64521998 - L2 LINE L2 0 3313 3116 324 203 38 25 chr17 20916509 20916588 -64521892 - MER3 DNA MER1_type -5 204 125 1110 60 0 0 chr17 20916589 20916723 -64521757 + AluY SINE Alu 1 134 -177 1882 129 24 3 chr17 20916723 20917017 -64521463 + AluY SINE Alu 1 300 -11 1793 116 4 0 chr17 20918185 20918435 -64520045 + AluSx SINE Alu 55 303 -9 2215 119 6 0 chr17 20918812 20919123 -64519357 - AluSp SINE Alu 0 313 1 495 224 80 0 chr17 20919292 20919448 -64519032 - MER3 DNA MER1_type -55 154 1 300 283 214 26 chr17 20919541 20919887 -64518593 - L2 LINE L2 -351 2963 2553 261 178 314 8 chr17 20920482 20920600 -64517880 + L2 LINE L2 2895 3048 -265 378 323 15 8 chr17 20920643 20920773 -64517707 + L2 LINE L2 3136 3266 -6 262 278 14 0 chr17 20920875 20920947 -64517533 - MIR SINE MIR -74 134 62 203 94 0 0 chr17 20921766 20921798 -64516682 + L2 LINE L2 2922 2953 -360 202 364 68 17 chr17 20921966 20922142 -64516338 + MIR3 SINE MIR 7 191 -17 1309 266 69 47 chr17 20922687 20923310 -64515170 + L1MC4a LINE L1 5256 5892 -1916 346 291 113 0 chr17 20923883 20924024 -64514456 - MIR SINE MIR -101 161 5 331 285 254 29 chr17 20924374 20924788 -64513692 - MER69 DNA AcHobo -1019 207 31 227 270 95 0 chr17 20925501 20925564 -64512916 + L2 LINE L2 3148 3216 -56 315 250 143 0 chr17 20925676 20925760 -64512720 - MIR SINE MIR -117 145 50 316 228 39 47 chr17 20926361 20926382 -64512098 + L1MC4 LINE L1 7913 7933 -109 2040 163 0 7 chr17 20926382 20926689 -64511791 + AluSx SINE Alu 1 305 -7 316 228 39 47 chr17 20926689 20926794 -64511686 + L1MC4 LINE L1 7933 8038 -4 434 302 83 53 chr17 20926960 20927298 -64511182 - L1ME4a LINE L1 -224 5897 5550 1626 130 4 0 chr17 20927342 20927572 -64510908 + AluSq SINE Alu 68 298 -15 703 276 105 16 chr17 20927644 20928014 -64510466 - L1ME4a LINE L1 -262 5859 5457 23 0 0 0 chr17 20928097 20928120 -64510360 + AT_rich Low_complexity Low_complexity 1 23 0 1346 62 0 4 chr17 20928613 20928826 -64509654 - AluY SINE Alu -8 303 1 229 25 0 50 chr17 20928911 20928951 -64509529 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 462 222 68 12 chr17 20929016 20929178 -64509302 - L1ME4a LINE L1 -1 6120 5950 352 226 97 86 chr17 20929283 20929469 -64509011 - L1 LINE L1 -2984 3162 2975 3886 124 50 19 chr17 20929956 20930599 -64507881 + THE1C-int LTR MaLR 918 1580 0 2014 146 52 22 chr17 20930599 20930963 -64507517 + THE1C LTR MaLR 1 375 0 1564 209 0 22 chr17 20931289 20931605 -64506875 - AluJo SINE Alu -1 311 3 1654 146 20 0 chr17 20933366 20933619 -64504861 - AluJb SINE Alu -52 260 3 670 124 0 0 chr17 20933766 20933871 -64504609 - AluSg/x SINE Alu -3 306 202 339 109 0 0 chr17 20933898 20933953 -64504527 + Alu SINE Alu 248 302 0 354 250 200 21 chr17 20934876 20935016 -64503464 - MIR SINE MIR -80 182 18 2321 94 0 10 chr17 20935290 20935589 -64502891 + AluSx SINE Alu 1 296 -16 2163 133 0 0 chr17 20935589 20935883 -64502597 + AluSc SINE Alu 1 294 -15 2236 113 0 3 chr17 20935889 20936191 -64502289 + AluSx SINE Alu 1 301 -11 1941 153 0 10 chr17 20936198 20936511 -64501969 + AluJb SINE Alu 1 310 -2 286 234 169 85 chr17 20936511 20936712 -64501768 - L2 LINE L2 -210 3103 2886 321 120 15 32 chr17 20936720 20936809 -64501671 + AluJo/FLAM SINE Alu 72 133 -169 2320 106 0 13 chr17 20936811 20936946 -64501534 + AluSx SINE Alu 1 136 -176 2178 112 23 3 chr17 20936946 20937251 -64501229 + AluSx SINE Alu 1 311 -1 2320 106 0 13 chr17 20937251 20937426 -64501054 + AluSx SINE Alu 136 307 -5 2532 50 7 3 chr17 20937429 20937730 -64500750 + AluY SINE Alu 1 302 -9 255 266 78 0 chr17 20938029 20938093 -64500387 - MIR SINE MIR -110 152 84 1494 103 0 28 chr17 20938228 20938442 -64500038 - AluY SINE Alu 0 311 104 251 108 0 0 chr17 20938542 20938605 -64499875 + Alu SINE Alu 246 308 0 414 272 43 52 chr17 20938606 20938952 -64499528 - L1M1 LINE L1 -4291 3274 2932 * 497 259 36 49 chr17 20938938 20939162 -64499318 - L1M4 LINE L1 -5868 674 454 554 278 34 11 chr17 20939171 20939434 -64499046 - L1M4 LINE L1 -3098 3048 2780 403 253 13 12 chr17 20939432 20939446 -64499034 - L1PBa LINE L1 -5072 1791 1779 * 895 111 7 0 chr17 20939446 20939581 -64498899 - L1PB2 LINE L1 -1 6150 6015 403 253 13 12 chr17 20939581 20940247 -64498233 - L1PBa LINE L1 -5084 1779 1012 762 203 32 101 chr17 20940251 20940468 -64498012 - AluJo SINE Alu -6 306 105 2268 108 3 19 chr17 20940607 20940921 -64497559 + AluSp SINE Alu 1 309 -4 196 306 111 14 chr17 20940947 20941019 -64497461 - MIR SINE MIR -106 102 24 324 312 63 63 chr17 20941125 20941243 -64497237 - MER5A DNA MER1_type 0 189 69 2359 74 14 0 chr17 20941243 20941526 -64496954 - AluSp SINE Alu -11 302 16 324 312 63 63 chr17 20941526 20941596 -64496884 - MER5A DNA MER1_type -119 70 1 1997 134 44 7 chr17 20941882 20942180 -64496300 - AluJb SINE Alu -3 309 1 279 0 0 0 chr17 20942610 20942620 -64495860 + (TG)n Simple_repeat Simple_repeat 1 41 0 279 0 0 0 chr17 20942620 20942651 -64495829 + (TG)n Simple_repeat Simple_repeat 2 32 0 2330 103 3 3 chr17 20942668 20942968 -64495512 - AluSp SINE Alu -13 300 1 26 0 0 0 chr17 20942979 20943005 -64495475 + AT_rich Low_complexity Low_complexity 1 26 0 1237 260 59 17 chr17 20943368 20943776 -64494704 - L1ME3A LINE L1 -115 6055 5631 2471 87 0 0 chr17 20944244 20944544 -64493936 + AluSq SINE Alu 1 300 -13 2543 68 0 0 chr17 20944672 20944983 -64493497 + AluY SINE Alu 1 311 0 1013 144 0 0 chr17 20944992 20945138 -64493342 + AluSc SINE Alu 145 290 -19 2598 44 3 0 chr17 20945138 20945432 -64493048 + AluY SINE Alu 1 295 -16 223 176 59 39 chr17 20946054 20946105 -64492375 - MER5A DNA MER1_type -137 52 1 381 286 18 0 chr17 20947104 20947216 -64491264 - L2 LINE L2 -5 3267 3154 509 308 153 31 chr17 20947499 20948186 -64490294 - L2 LINE L2 -231 3082 2317 3239 40 10 7 chr17 20948296 20948699 -64489781 + L1PA7 LINE L1 5751 6154 0 2446 73 3 0 chr17 20948747 20949049 -64489431 + AluY SINE Alu 1 303 -8 2588 50 3 0 chr17 20949058 20949358 -64489122 + AluY SINE Alu 1 301 -10 962 262 34 17 chr17 20950207 20950501 -64487979 - MER89-int LTR ERV1 -5142 1659 1361 1513 207 54 6 chr17 20950510 20950843 -64487637 - MLT1A1 LTR MaLR -4 361 13 309 219 0 37 chr17 20950848 20950930 -64487550 - MER89-int LTR ERV1 -5438 1363 1285 268 356 15 0 chr17 20952052 20952187 -64486293 + (CA)n Simple_repeat Simple_repeat 1 137 0 2438 77 0 3 chr17 20955747 20956047 -64482433 + AluY SINE Alu 1 299 -12 1216 92 12 18 chr17 20956047 20956210 -64482270 + AluSc SINE Alu 132 293 -16 180 0 0 0 chr17 20956252 20956272 -64482208 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 639 130 74 0 chr17 20956278 20956386 -64482094 - AluSp/q SINE Alu -24 289 174 255 93 0 0 chr17 20956401 20956444 -64482036 + (TTGG)n Simple_repeat Simple_repeat 1 43 0 2068 115 0 10 chr17 20956444 20956732 -64481748 - AluSq SINE Alu -28 285 1 1114 202 0 9 chr17 20957060 20957278 -64481202 - U3 snRNA snRNA -1 216 1 23 54 0 0 chr17 20957453 20957490 -64480990 + AT_rich Low_complexity Low_complexity 1 37 0 1053 157 22 101 chr17 20957616 20957883 -64480597 + AluJo SINE Alu 45 290 -22 1623 154 20 26 chr17 20957899 20958243 -64480237 - L1MB4 LINE L1 -16 6164 5823 1528 162 8 19 chr17 20958254 20958513 -64479967 - AluJb SINE Alu -55 257 2 1244 63 6 19 chr17 20958513 20958665 -64479815 - AluYa5 SINE Alu -7 304 153 593 133 33 33 chr17 20958765 20958885 -64479595 + AluSp/q SINE Alu 193 312 -1 1734 251 54 8 chr17 20958885 20959386 -64479094 - L1M4 LINE L1 -1819 4327 3804 871 124 0 0 chr17 20959386 20959515 -64478965 + LOR1a LTR ERV1 369 497 0 422 241 83 0 chr17 20959515 20959641 -64478839 + MLT1C LTR MaLR 268 404 -63 2170 128 7 0 chr17 20959652 20959942 -64478538 - AluSx SINE Alu -20 292 1 1027 206 67 18 chr17 20959959 20960202 -64478278 - L1MD2 LINE L1 -15 6344 6023 1724 170 0 44 chr17 20960202 20960382 -64478098 - AluJo SINE Alu -9 303 141 2358 60 10 17 chr17 20960382 20960680 -64477800 - AluY SINE Alu -15 296 1 1724 170 0 44 chr17 20960680 20960816 -64477664 - AluJo SINE Alu -171 141 1 1027 206 67 18 chr17 20960816 20960960 -64477520 - L1MD2 LINE L1 -336 6023 5887 1951 114 0 0 chr17 20960962 20961217 -64477263 - AluSx SINE Alu -12 300 46 2967 162 99 25 chr17 20961562 20961844 -64476636 + MER67C LTR ERV1 3 262 -448 2426 62 14 0 chr17 20961844 20962136 -64476344 + AluSp SINE Alu 1 296 -17 2967 162 99 25 chr17 20962136 20962507 -64475973 + MER67C LTR ERV1 262 705 -5 2121 85 4 0 chr17 20962507 20962766 -64475714 + AluSp SINE Alu 1 260 -53 2503 83 0 6 chr17 20962766 20963077 -64475403 + AluSg SINE Alu 1 310 0 1115 162 0 0 chr17 20963079 20963252 -64475228 + AluSg/x SINE Alu 135 307 -5 1733 173 27 20 chr17 20963260 20963560 -64474920 + AluJb SINE Alu 1 302 -10 652 196 22 73 chr17 20963581 20963760 -64474720 - L1 LINE L1 -1156 4990 4821 501 206 28 0 chr17 20963778 20963919 -64474561 + GA-rich Low_complexity Low_complexity 2 146 0 2275 129 0 0 chr17 20963920 20964229 -64474251 + AluSg SINE Alu 1 309 -1 257 204 0 20 chr17 20964229 20964278 -64474202 + polypurine Low_complexity Low_complexity 1 48 0 691 222 149 0 chr17 20964278 20964472 -64474008 + MLT1G3 LTR MaLR 78 300 -230 576 260 23 55 chr17 20964691 20964844 -64473636 + LTR16C LTR ERVL 270 415 -76 2252 120 10 0 chr17 20964844 20965145 -64473335 + AluSx SINE Alu 9 312 0 576 260 23 55 chr17 20965145 20965210 -64473270 + LTR16C LTR ERVL 415 481 -10 777 297 52 0 chr17 20965219 20965451 -64473029 + MIR SINE MIR 8 251 -11 272 264 96 45 chr17 20965473 20965651 -64472829 - MLT1K LTR MaLR -46 542 356 2193 132 3 0 chr17 20965674 20965970 -64472510 + AluSq SINE Alu 7 303 -10 1938 137 25 0 chr17 20965990 20966275 -64472205 + AluSq SINE Alu 12 303 -10 1015 118 0 7 chr17 20966275 20966411 -64472069 + AluSq/x SINE Alu 1 135 -177 2266 54 0 0 chr17 20966411 20966669 -64471811 + AluY SINE Alu 1 258 -53 243 250 12 6 chr17 20967001 20967161 -64471319 + (TG)n Simple_repeat Simple_repeat 1 161 0 199 262 6 6 chr17 20967188 20967356 -64471124 + (TG)n Simple_repeat Simple_repeat 1 168 0 234 195 0 0 chr17 20967410 20967451 -64471029 + L2 LINE L2 3016 3056 -216 296 275 12 12 chr17 20967595 20967675 -64470805 + L2 LINE L2 3229 3308 -5 491 232 252 0 chr17 20968033 20968184 -64470296 - MER5A DNA MER1_type 0 189 1 2056 103 35 35 chr17 20968372 20968683 -64469797 + AluY SINE Alu 1 311 0 319 245 192 6 chr17 20968730 20968893 -64469587 + MIR SINE MIR 16 209 -53 190 266 0 62 chr17 20968927 20968991 -64469489 + MIR SINE MIR 93 149 -59 457 265 244 17 chr17 20969084 20969322 -64469158 + L2 LINE L2 3021 3312 -1 276 364 93 12 chr17 20969910 20970072 -64468408 + MIR SINE MIR 13 187 -75 1851 143 0 7 chr17 20970564 20970843 -64467637 - AluSx SINE Alu -35 277 1 383 259 86 26 chr17 20971081 20971197 -64467283 + L1ME4a LINE L1 5559 5681 -440 757 241 6 13 chr17 20971204 20971362 -64467118 + AluJo SINE Alu 125 281 -31 243 0 0 0 chr17 20971365 20971392 -64467088 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 506 234 93 93 chr17 20971438 20971835 -64466645 + L1ME4a LINE L1 5725 6121 0 707 226 104 83 chr17 20972065 20972525 -64465955 + MER113 DNA MER1_type? 1 470 -51 314 248 171 0 chr17 20972625 20972730 -64465750 + L2 LINE L2 3149 3271 -1 278 263 352 0 chr17 20973177 20973356 -64465124 - MIR SINE MIR -20 242 1 263 362 156 12 chr17 20973500 20973743 -64464737 - L2 LINE L2 -6 3307 3030 725 129 10 0 chr17 20974080 20974181 -64464299 - AluJ/FLAM SINE Alu -210 102 1 888 264 90 0 chr17 20974182 20974516 -64463964 - MER113 DNA MER1_type? -112 409 46 2431 64 0 0 chr17 20975350 20975647 -64462833 + AluY SINE Alu 14 310 -1 346 269 126 8 chr17 20976700 20976819 -64461661 + MIR SINE MIR 7 139 -123 560 290 139 57 chr17 20976832 20977198 -64461282 - L2 LINE L2 -20 3252 2857 2159 120 0 0 chr17 20977244 20977543 -64460937 + AluSx SINE Alu 1 299 -13 270 211 42 14 chr17 20977550 20977621 -64460859 + MIR SINE MIR 162 234 -28 241 169 153 0 chr17 20978073 20978132 -64460348 + L2 LINE L2 3204 3271 -1 801 171 23 0 chr17 20980162 20980291 -64458189 - FLAM_A SINE Alu 0 133 2 226 319 166 47 chr17 20980834 20981003 -64457477 - MER5A DNA MER1_type 0 189 1 333 315 115 45 chr17 20981335 20981505 -64456975 + MIR3 SINE MIR 8 188 -20 500 312 40 13 chr17 20982016 20982166 -64456314 + MIR3 SINE MIR 33 185 -42 220 299 0 0 chr17 20982569 20982656 -64455824 + (CCA)n Simple_repeat Simple_repeat 1 87 0 417 278 31 63 chr17 20983661 20983852 -64454628 + MIR SINE MIR 28 212 -50 1340 274 106 63 chr17 20985608 20985875 -64452605 + HAL1 LINE L1 102 356 -2151 1723 104 119 11 chr17 20985875 20986143 -64452337 + AluSc SINE Alu 1 297 -12 1340 274 106 63 chr17 20986143 20986749 -64451731 + HAL1 LINE L1 356 1013 -1494 22 56 0 0 chr17 20987213 20987249 -64451231 + GC_rich Low_complexity Low_complexity 1 36 0 222 310 0 60 chr17 20987401 20987501 -64450979 + MIR SINE MIR 60 153 -109 250 340 19 28 chr17 20988286 20988392 -64450088 - L2 LINE L2 -41 3231 3127 272 295 26 0 chr17 20988410 20988488 -64449992 - MIR SINE MIR -110 152 73 182 250 0 0 chr17 20988820 20988872 -64449608 + L3 LINE CR1 1423 1474 -103 308 261 65 0 chr17 20989409 20989501 -64448979 - MIR3 SINE MIR -49 159 62 346 289 19 10 chr17 20989635 20989739 -64448741 + MIR SINE MIR 17 121 -141 299 272 78 0 chr17 20990130 20990233 -64448247 - L2 LINE L2 -245 3027 2917 371 242 117 25 chr17 20990466 20990635 -64447845 - MIR SINE MIR -63 145 11 364 276 31 0 chr17 20991736 20991834 -64446646 - MIR SINE MIR -122 140 40 1974 108 39 0 chr17 20992424 20992728 -64445752 - AluSx SINE Alu 0 315 1 225 267 47 12 chr17 20993973 20994059 -64444421 - L2 LINE L2 -261 3011 2923 2154 106 0 7 chr17 20995478 20995770 -64442710 - AluSx SINE Alu -22 290 1 2091 100 0 7 chr17 20995777 20996081 -64442399 - AluSp SINE Alu 0 313 19 303 314 0 0 chr17 20998690 20998795 -64439685 + GA-rich Low_complexity Low_complexity 1 105 0 202 229 16 16 chr17 20999562 20999623 -64438857 + (CAGG)n Simple_repeat Simple_repeat 4 64 0 22 70 0 0 chr17 21000645 21000688 -64437792 + AT_rich Low_complexity Low_complexity 1 43 0 22 35 0 0 chr17 21000852 21000881 -64437599 + GC_rich Low_complexity Low_complexity 1 29 0 2353 81 0 7 chr17 21001056 21001364 -64437116 + AluY SINE Alu 1 306 -5 2230 68 4 0 chr17 21002192 21002506 -64435974 + AluY SINE Alu 1 315 0 185 289 218 27 chr17 21005090 21005457 -64433023 + L2 LINE L2 2084 2520 -794 2176 78 7 14 chr17 21006579 21006872 -64431608 - AluSx SINE Alu -21 291 1 401 262 19 10 chr17 21008239 21008342 -64430138 - L2 LINE L2 -1 3271 3168 203 259 0 37 chr17 21009044 21009098 -64429382 - L2 LINE L2 0 3272 3221 221 30 61 0 chr17 21011321 21011354 -64427126 + (CAGG)n Simple_repeat Simple_repeat 4 38 0 2094 125 0 7 chr17 21013636 21013941 -64424539 + AluSg1 SINE Alu 3 305 -4 229 301 64 16 chr17 21013968 21014082 -64424398 - MIR3 SINE MIR -54 154 63 1112 53 0 0 chr17 21014900 21015032 -64423448 - AluY SINE Alu -179 132 1 2099 135 7 0 chr17 21015033 21015336 -64423144 - AluSx SINE Alu -7 305 1 828 113 9 0 chr17 21016130 21016245 -64422235 - FLAM_C SINE Alu -15 118 3 2946 198 99 19 chr17 21016656 21016942 -64421538 + MER21B LTR ERV1 5 267 -596 1964 123 6 44 chr17 21016942 21017260 -64421220 + AluSg SINE Alu 1 306 -4 2946 198 99 19 chr17 21017260 21017757 -64420723 + MER21B LTR ERV1 267 851 -12 2069 91 45 0 chr17 21017867 21018154 -64420326 - AluSp SINE Alu -13 300 1 446 294 106 49 chr17 21018822 21019067 -64419413 + MIR SINE MIR 4 262 0 229 330 46 55 chr17 21019229 21019338 -64419142 - MIR SINE MIR -6 256 149 206 304 20 39 chr17 21020168 21020270 -64418210 + MIR SINE MIR 50 149 -59 34 0 0 22 chr17 21021064 21021096 -64417384 + AT_rich Low_complexity Low_complexity 1 33 -11 2036 132 7 0 chr17 21021096 21021384 -64417096 - AluSx SINE Alu -22 290 1 34 0 0 22 chr17 21021384 21021396 -64417084 + AT_rich Low_complexity Low_complexity 33 44 0 883 185 6 6 chr17 21021396 21021558 -64416922 + AluJb SINE Alu 131 292 -20 1016 90 0 0 chr17 21021564 21021697 -64416783 + AluY SINE Alu 1 133 -178 2320 79 0 0 chr17 21021697 21021989 -64416491 + AluY SINE Alu 1 292 -19 1039 216 112 14 chr17 21021990 21022268 -64416212 - Charlie1b DNA MER1_type -2380 381 61 2247 94 0 0 chr17 21022268 21022555 -64415925 - AluSc SINE Alu -22 287 1 1039 216 112 14 chr17 21022555 21022623 -64415857 - Charlie1b DNA MER1_type -2700 61 1 317 324 117 45 chr17 21023778 21024000 -64414480 - MIR SINE MIR -5 257 20 2212 101 10 3 chr17 21024042 21024349 -64414131 - AluSp SINE Alu -4 309 1 216 246 28 39 chr17 21024352 21024442 -64414038 - MIR SINE MIR -62 146 61 261 202 146 22 chr17 21024607 21024696 -64413784 + MIR SINE MIR 79 178 -84 2269 68 3 7 chr17 21025298 21025590 -64412890 + AluY SINE Alu 1 291 -20 2398 44 3 38 chr17 21025590 21025907 -64412573 + AluY SINE Alu 1 306 -5 1802 122 90 0 chr17 21025934 21026212 -64412268 - AluJb SINE Alu -7 305 3 1963 95 43 23 chr17 21027014 21027319 -64411161 + AluSx SINE Alu 1 311 -1 1567 169 36 11 chr17 21027328 21027606 -64410874 + AluJo SINE Alu 1 285 -27 212 364 74 11 chr17 21027902 21028078 -64410402 - MIR SINE MIR -41 221 35 2819 191 32 49 chr17 21028213 21028296 -64410184 - L1MB5 LINE L1 -184 5990 5907 1655 111 118 11 chr17 21028296 21028567 -64409913 + AluSg1 SINE Alu 1 300 -9 2819 191 32 49 chr17 21028567 21029155 -64409325 - L1MB5 LINE L1 -267 5907 5331 2214 104 3 13 chr17 21029155 21029471 -64409009 - AluSq SINE Alu 0 313 1 2819 191 32 49 chr17 21029471 21029548 -64408932 - L1MB5 LINE L1 -843 5331 5254 226 267 25 83 chr17 21029620 21029740 -64408740 + MIR SINE MIR 27 139 -69 2249 177 63 72 chr17 21030777 21031336 -64407144 + MLT2B3 LTR ERVL 1 554 0 1881 152 7 10 chr17 21031634 21031937 -64406543 + AluSx SINE Alu 1 302 -10 560 165 0 0 chr17 21031948 21032033 -64406447 + AluJ/FLAM SINE Alu 8 92 -220 1166 188 58 0 chr17 21032047 21032270 -64406210 - AluJo SINE Alu -76 236 1 337 243 93 28 chr17 21033208 21033315 -64405165 - MIR SINE MIR -36 226 113 2252 85 0 3 chr17 21033862 21034155 -64404325 + AluSc SINE Alu 1 292 -17 1595 209 36 25 chr17 21034333 21034692 -64403788 + MLT1A1 LTR MaLR 1 363 -2 2046 112 0 7 chr17 21034714 21035021 -64403459 - AluSp SINE Alu 0 305 1 2212 104 0 0 chr17 21035028 21035325 -64403155 - AluSc SINE Alu -12 297 1 191 175 75 0 chr17 21037766 21037806 -64400674 + MIR SINE MIR 93 135 -73 266 319 11 0 chr17 21037861 21037955 -64400525 - MIR SINE MIR -56 152 58 263 278 56 0 chr17 21041051 21041141 -64397339 + MIR3 SINE MIR 61 155 -53 193 297 69 76 chr17 21041188 21041333 -64397147 - L2 LINE L2 -18 3254 3111 234 282 239 8 chr17 21041355 21041472 -64397008 - MIR SINE MIR 0 262 119 802 141 0 8 chr17 21041474 21041602 -64396878 + AluJo/FLAM SINE Alu 5 131 -181 2255 39 13 46 chr17 21041605 21041911 -64396569 + AluY SINE Alu 1 296 -15 1424 172 65 38 chr17 21042043 21042177 -64396303 + AluJo SINE Alu 1 130 -172 2105 84 6 47 chr17 21042177 21042499 -64395981 + AluY SINE Alu 1 309 -2 1424 172 65 38 chr17 21042499 21042654 -64395826 + AluJo SINE Alu 130 298 -4 241 256 61 12 chr17 21044339 21044421 -64394059 + MIR SINE MIR 59 144 -118 237 319 14 0 chr17 21045290 21045359 -64393121 + MIR SINE MIR 62 131 -77 369 253 312 5 chr17 21045594 21045815 -64392665 + L2 LINE L2 2472 2760 -554 824 263 121 26 chr17 21045816 21046162 -64392318 + L2 LINE L2 2913 3291 -22 1840 145 14 17 chr17 21046505 21046801 -64391679 + AluJb SINE Alu 1 295 -17 222 289 0 0 chr17 21047232 21047284 -64391196 + MIR SINE MIR 87 138 -70 244 200 0 0 chr17 21047584 21047629 -64390851 - MIR SINE MIR -62 146 102 198 103 0 0 chr17 21047673 21047702 -64390778 + (CAGGG)n Simple_repeat Simple_repeat 3 31 0 358 243 30 30 chr17 21047886 21048055 -64390425 + (CAGAGA)n Simple_repeat Simple_repeat 2 170 0 186 342 40 0 chr17 21048453 21048529 -64389951 + MIR SINE MIR 90 168 -94 210 340 40 27 chr17 21048534 21048684 -64389796 + L2 LINE L2 2873 3024 -248 398 317 32 0 chr17 21049223 21049346 -64389134 - MIR SINE MIR -19 243 117 194 245 75 0 chr17 21049429 21049482 -64388998 + MIR SINE MIR 16 72 -136 661 164 0 0 chr17 21049509 21049619 -64388861 + AluJb SINE Alu 1 110 -202 332 209 230 97 chr17 21099630 21099826 -64338654 + MLT1K LTR MaLR 367 588 0 348 242 140 4 chr17 21100540 21100674 -64337806 - MIR SINE MIR -58 204 57 1886 118 17 17 chr17 21100685 21100973 -64337507 - AluSx SINE Alu -24 288 1 2314 76 3 0 chr17 21100989 21101290 -64337190 - AluSp SINE Alu -11 302 1 21 0 0 0 chr17 21101316 21101337 -64337143 + AT_rich Low_complexity Low_complexity 1 21 0 326 308 67 0 chr17 21101417 21101521 -64336959 + L2 LINE L2 3203 3313 0 2081 108 0 31 chr17 21101586 21101909 -64336571 - AluSq SINE Alu 0 313 1 470 256 129 3 chr17 21101960 21102133 -64336347 + L1ME LINE L1 5468 5661 -460 665 268 48 0 chr17 21102283 21102451 -64336029 - MIR SINE MIR -67 195 20 826 132 7 0 chr17 21102675 21102811 -64335669 + AluSg/x SINE Alu 161 297 -15 2165 128 0 0 chr17 21102861 21103173 -64335307 + AluSx SINE Alu 1 312 0 273 266 74 106 chr17 21103364 21103586 -64334894 - MIR3 SINE MIR -46 216 8 578 216 116 25 chr17 21103929 21104128 -64334352 - MLT1F LTR MaLR -19 523 307 260 253 22 99 chr17 21104129 21104311 -64334169 + HAL1 LINE L1 101 268 -2239 866 149 58 0 chr17 21104367 21104521 -64333959 + AluJo SINE Alu 120 282 -30 295 183 0 17 chr17 21104547 21104607 -64333873 - MER63 DNA MER1_type -230 830 772 271 287 113 105 chr17 21104619 21104999 -64333481 - L2 LINE L2 -3 3269 2887 369 253 222 45 chr17 21105027 21105383 -64333097 - MLT1K LTR MaLR -24 564 146 636 244 86 38 chr17 21105767 21105976 -64332504 + MIR SINE MIR 5 223 -39 2241 82 0 3 chr17 21106126 21106420 -64332060 + AluSx SINE Alu 1 293 -19 629 282 117 24 chr17 21106535 21106577 -64331903 - MIR SINE MIR -17 245 208 2161 62 0 28 chr17 21106577 21106891 -64331589 - AluSg SINE Alu 0 306 1 629 282 117 24 chr17 21106891 21107053 -64331427 - MIR SINE MIR -54 208 21 225 196 22 0 chr17 21107388 21107434 -64331046 + (CTGGGG)n Simple_repeat Simple_repeat 2 48 0 202 293 12 0 chr17 21107393 21107475 -64331005 + G-rich Low_complexity Low_complexity 6 88 0 * 283 330 43 0 chr17 21108618 21108733 -64329747 + MIR SINE MIR 66 185 -77 2161 88 10 3 chr17 21108915 21109211 -64329269 - AluSg SINE Alu -8 302 5 1965 120 17 3 chr17 21109227 21109527 -64328953 - AluSx SINE Alu -8 304 1 310 252 101 34 chr17 21109604 21109723 -64328757 - L2 LINE L2 -3 3310 3184 2360 87 3 0 chr17 21110354 21110665 -64327815 + AluSp SINE Alu 1 312 -1 651 331 89 23 chr17 21110824 21111055 -64327425 + L3 LINE CR1 1119 1333 -244 1888 128 7 0 chr17 21111055 21111359 -64327121 - AluSx SINE Alu 0 306 1 651 331 89 23 chr17 21111359 21111555 -64326925 + L3 LINE CR1 1333 1575 -2 255 330 123 47 chr17 21111704 21111916 -64326564 - MIR SINE MIR -21 241 14 2133 85 3 0 chr17 21111964 21112290 -64326190 - AluY SINE Alu 0 328 2 797 232 185 31 chr17 21112303 21112562 -64325918 - AluSg SINE Alu -1 299 1 2156 98 0 3 chr17 21112655 21112998 -64325482 - AluSx SINE Alu 0 349 8 2034 109 12 43 chr17 21113003 21113325 -64325155 - AluSq SINE Alu -1 312 1 2078 109 3 0 chr17 21113468 21113762 -64324718 - AluSg SINE Alu -15 295 1 2122 103 0 3 chr17 21114025 21114316 -64324164 - AluSc SINE Alu -19 290 1 29 28 0 0 chr17 21115218 21115254 -64323226 + AT_rich Low_complexity Low_complexity 1 36 0 302 265 0 0 chr17 21115357 21115425 -64323055 - L2 LINE L2 -4 3268 3201 2073 98 18 0 chr17 21115454 21115740 -64322740 + AluY SINE Alu 1 291 -20 860 252 139 54 chr17 21115799 21116244 -64322236 - L2 LINE L2 -4 3309 2827 1490 153 81 0 chr17 21117028 21117310 -64321170 + AluJb SINE Alu 3 305 0 2230 90 0 13 chr17 21117363 21117674 -64320806 + AluSq SINE Alu 1 307 -6 295 258 79 0 chr17 21117777 21117866 -64320614 + MIR SINE MIR 167 262 0 742 187 8 15 chr17 21117896 21118030 -64320450 - FLAM_C SINE Alu 0 133 1 1324 184 0 107 chr17 21118510 21118847 -64319633 - AluJb SINE Alu -1 301 1 565 174 15 53 chr17 21118847 21118899 -64319581 - AluSp SINE Alu -183 130 84 1805 106 17 0 chr17 21119001 21119237 -64319243 - AluSp SINE Alu -73 240 1 1658 174 3 10 chr17 21119626 21119914 -64318566 - AluJo SINE Alu -4 308 23 1973 157 0 3 chr17 21121013 21121313 -64317167 + AluSx SINE Alu 1 299 -13 2116 118 28 0 chr17 21121313 21121602 -64316878 + AluSg SINE Alu 1 297 -13 2143 92 3 3 chr17 21121602 21121886 -64316594 + AluSp SINE Alu 21 304 -9 825 260 82 30 chr17 21122217 21122655 -64315825 - L2 LINE L2 -1 3312 2852 382 238 228 10 chr17 21122660 21122866 -64315614 - L2 LINE L2 -1054 2260 2010 1548 212 20 0 chr17 21123645 21123947 -64314533 - AluJo SINE Alu -4 308 1 336 272 25 0 chr17 21123983 21124064 -64314416 + AluJ/FLAM SINE Alu 1 83 -219 329 235 191 0 chr17 21124043 21124111 -64314369 - FRAM/FAM SINE Alu -92 83 3 * 2161 70 52 0 chr17 21124282 21124575 -64313905 - AluSp SINE Alu 0 307 1 1970 169 0 0 chr17 21124594 21124901 -64313579 - AluSx SINE Alu -5 307 1 1240 129 0 0 chr17 21125014 21125185 -64313295 - AluSg/x SINE Alu -10 300 130 1946 102 26 0 chr17 21125192 21125457 -64313023 - AluSx SINE Alu -12 300 29 1899 178 3 0 chr17 21125570 21125874 -64312606 + AluJo SINE Alu 1 305 -7 445 174 96 0 chr17 21126488 21126604 -64311876 - L1 LINE L1 -2195 3951 3805 1877 96 82 34 chr17 21126734 21127026 -64311454 - AluSg SINE Alu -4 306 1 2817 212 32 14 chr17 21127304 21127416 -64311064 + L1M4 LINE L1 2521 2630 -3516 2115 108 31 0 chr17 21127416 21127703 -64310777 + AluSx SINE Alu 2 297 -15 2817 212 32 14 chr17 21127703 21128316 -64310164 + L1M4 LINE L1 2630 3259 -2887 338 219 0 0 chr17 21128699 21128772 -64309708 + MIR SINE MIR 175 247 -15 249 143 159 32 chr17 21128978 21129041 -64309439 - MER57A LTR ERV1 -3 400 330 1471 137 61 6 chr17 21129068 21129377 -64309103 - LTR54 LTR ERV1 -134 376 1 296 294 23 0 chr17 21129873 21129976 -64308504 - MIR SINE MIR -48 160 55 212 292 101 11 chr17 21130233 21130322 -64308158 + MIR SINE MIR 16 112 -150 451 271 58 26 chr17 21130339 21130494 -64307986 - MIR SINE MIR -66 196 37 366 23 0 0 chr17 21130621 21130664 -64307816 + (CA)n Simple_repeat Simple_repeat 1 43 0 1806 184 23 20 chr17 21130665 21131012 -64307468 - MLT2C1 LTR ERVL -49 348 1 310 343 9 0 chr17 21131026 21131131 -64307349 + L2 LINE L2 3197 3302 -11 21 0 0 0 chr17 21132060 21132081 -64306399 + AT_rich Low_complexity Low_complexity 1 21 0 216 0 0 0 chr17 21132222 21132246 -64306234 + (CA)n Simple_repeat Simple_repeat 2 25 0 240 290 0 0 chr17 21132246 21132308 -64306172 + L2 LINE L2 2864 2925 -347 2732 42 0 0 chr17 21132395 21132701 -64305779 + AluY SINE Alu 1 306 -5 2293 96 13 0 chr17 21132707 21133010 -64305470 + AluSx SINE Alu 1 307 -5 2089 109 20 3 chr17 21133010 21133303 -64305177 + AluSx SINE Alu 1 298 -14 1078 138 6 0 chr17 21133395 21133555 -64304925 - AluSx SINE Alu -151 161 1 423 339 18 4 chr17 21133671 21133898 -64304582 - L1M4 LINE L1 -1093 5053 4824 271 305 93 7 chr17 21134024 21134175 -64304305 - L1M4 LINE L1 -1021 5125 4962 687 272 30 41 chr17 21134246 21134595 -64303885 + MLT1I LTR MaLR 60 450 0 269 299 23 11 chr17 21134628 21134802 -64303678 - L1M4 LINE L1 -1231 4915 4740 2310 95 3 3 chr17 21134802 21135097 -64303383 - AluY SINE Alu -16 295 1 705 272 177 15 chr17 21135107 21135643 -64302837 - L1M4 LINE L1 -1497 4649 4027 520 323 6 12 chr17 21135764 21135928 -64302552 + L1MEc LINE L1 148 310 -6086 779 315 83 15 chr17 21135929 21136338 -64302142 + L3 LINE CR1 1130 1566 -11 2398 64 7 3 chr17 21136400 21136697 -64301783 - AluY SINE Alu -13 298 1 21 0 0 0 chr17 21136786 21136807 -64301673 + AT_rich Low_complexity Low_complexity 1 21 0 2239 174 21 28 chr17 21136837 21137273 -64301207 - Tigger2a DNA MER2_type 0 434 2 1595 179 34 10 chr17 21137382 21137678 -64300802 + AluJo SINE Alu 1 303 -9 201 269 0 0 chr17 21137946 21137998 -64300482 - MER91B DNA MER1_type -60 130 79 1839 154 3 39 chr17 21138395 21138707 -64299773 + AluJo SINE Alu 1 301 -11 408 245 69 73 chr17 21139343 21139576 -64298904 - HAL1b LINE L1 -451 897 666 542 242 78 0 chr17 21139607 21139760 -64298720 - HAL1b LINE L1 -783 565 401 335 287 93 28 chr17 21139807 21140054 -64298426 - HAL1b LINE L1 -1024 324 62 194 272 206 22 chr17 21140103 21140283 -64298197 - L2 LINE L2 -63 3250 3038 1114 72 0 0 chr17 21140950 21141089 -64297391 - MER85 DNA T2_type 0 139 1 2420 85 0 3 chr17 21141099 21141405 -64297075 + AluY SINE Alu 6 310 -1 1185 174 82 0 chr17 21142353 21142560 -64295920 + MER58A DNA MER1_type 1 224 0 379 154 0 64 chr17 21143015 21143093 -64295387 + L2 LINE L2 3198 3270 -2 2299 107 0 0 chr17 21143743 21144041 -64294439 - AluY SINE Alu -13 298 1 2625 39 13 0 chr17 21144232 21144537 -64293943 - AluY SINE Alu -2 309 1 888 281 126 52 chr17 21146276 21146644 -64291836 + MLT1J LTR MaLR 1 413 -98 2086 123 10 7 chr17 21146644 21146936 -64291544 - AluSq SINE Alu -19 294 2 888 281 126 52 chr17 21146936 21147043 -64291437 + MLT1J LTR MaLR 413 511 0 1407 241 73 14 chr17 21147220 21147725 -64290755 - MLT1G1 LTR MaLR -12 578 1 2251 110 3 0 chr17 21147860 21148160 -64290320 - AluSp SINE Alu -12 301 1 465 19 0 0 chr17 21148234 21148288 -64290192 + (TG)n Simple_repeat Simple_repeat 2 55 0 208 237 99 84 chr17 21148370 21148501 -64289979 - MIR SINE MIR -55 207 75 297 200 80 40 chr17 21148535 21148610 -64289870 + MLT1J2 LTR MaLR 67 144 -306 427 269 42 17 chr17 21148612 21148731 -64289749 + MER20B DNA MER1_type 120 241 -542 1852 251 49 19 chr17 21148762 21149292 -64289188 + MER90 LTR ERV1 69 614 0 1096 247 84 38 chr17 21149350 21149800 -64288680 + MER20B DNA MER1_type 312 782 -1 3844 227 84 29 chr17 21150108 21151800 -64286680 + L1M4 LINE L1 14 1612 -5213 1754 170 35 0 chr17 21151800 21152082 -64286398 + AluJb SINE Alu 5 296 -16 3844 227 84 29 chr17 21152082 21152740 -64285740 + L1M4 LINE L1 1612 2233 -4592 2168 108 7 10 chr17 21152740 21153037 -64285443 + AluSx SINE Alu 1 296 -16 3844 227 84 29 chr17 21153037 21153235 -64285245 + L1M4 LINE L1 2233 2936 -3889 1575 169 29 38 chr17 21153628 21153941 -64284539 + AluJb SINE Alu 1 310 -2 542 149 93 0 chr17 21153973 21154080 -64284400 - AluSg/x SINE Alu 0 312 196 2426 86 3 0 chr17 21154094 21154398 -64284082 - AluSp SINE Alu -8 305 1 939 154 0 0 chr17 21154398 21154534 -64283946 - AluSq/x SINE Alu -176 136 1 413 219 53 18 chr17 21154615 21154729 -64283751 - HsTC2 DNA Tc2 -4 1894 1777 254 128 0 0 chr17 21154733 21154772 -64283708 - HsTC2 DNA Tc2 -595 1303 1265 273 247 14 0 chr17 21154780 21154853 -64283627 - HsTC2 DNA Tc2 -1204 694 621 2461 64 0 10 chr17 21154871 21155169 -64283311 - AluY SINE Alu -16 295 1 1156 196 85 91 chr17 21155169 21155435 -64283045 - HsTC2 DNA Tc2 -1331 567 302 2371 93 6 3 chr17 21155435 21155747 -64282733 - AluSp SINE Alu 0 313 1 1156 196 85 91 chr17 21155747 21155822 -64282658 - HsTC2 DNA Tc2 -1596 302 228 1283 136 48 19 chr17 21155834 21156040 -64282440 - AluSx SINE Alu -100 212 1 318 295 108 35 chr17 21156093 21156351 -64282129 - L1MEd LINE L1 -4969 1150 874 7170 59 6 48 chr17 21156351 21157719 -64280761 - SVA Other Other -520 1386 433 21 0 0 0 chr17 21158210 21158231 -64280249 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr17 21159004 21159027 -64279453 + AT_rich Low_complexity Low_complexity 1 23 0 2463 97 0 0 chr17 21159027 21159338 -64279142 - AluSp SINE Alu -2 311 1 738 151 7 50 chr17 21159340 21159479 -64279001 - AluJo SINE Alu -178 134 2 904 161 32 63 chr17 21160443 21160740 -64277740 - L1MB5 LINE L1 -6 6666 6361 2148 127 0 0 chr17 21160740 21161023 -64277457 - AluSg SINE Alu -27 283 1 904 161 32 63 chr17 21161023 21161460 -64277020 - L1MB5 LINE L1 -311 6361 5890 574 130 0 22 chr17 21161460 21161552 -64276928 - FLAM_A SINE Alu -10 132 43 378 0 0 0 chr17 21161557 21161599 -64276881 + (TG)n Simple_repeat Simple_repeat 2 43 0 1261 68 0 0 chr17 21161598 21161770 -64276710 - AluSx SINE Alu 0 305 134 1268 182 42 29 chr17 21161770 21162018 -64276462 - L1MB5 LINE L1 -747 5897 5643 1978 73 23 8 chr17 21162018 21162279 -64276201 - AluSg SINE Alu -5 305 41 1268 182 42 29 chr17 21162279 21162337 -64276143 - L1MB5 LINE L1 -1001 5643 5587 1547 190 0 0 chr17 21162343 21162590 -64275890 + AluJb SINE Alu 1 247 -65 936 118 14 35 chr17 21162590 21162734 -64275746 - AluSx SINE Alu -172 141 1 1709 124 80 29 chr17 21162742 21163017 -64275463 - AluSq SINE Alu -18 295 7 2258 100 3 7 chr17 21163030 21163329 -64275151 - AluSp SINE Alu -15 298 1 1338 181 38 52 chr17 21163331 21163350 -64275130 - L1MB5 LINE L1 -1390 5254 5236 2291 92 3 23 chr17 21163350 21163654 -64274826 - AluSg1 SINE Alu -11 298 1 1338 181 38 52 chr17 21163654 21163953 -64274527 - L1MB5 LINE L1 -1408 5236 4939 1415 172 67 50 chr17 21163953 21164250 -64274230 - AluJo SINE Alu -10 302 1 1338 181 38 52 chr17 21164250 21164295 -64274185 - L1MB5 LINE L1 -1705 4939 4895 646 200 39 0 chr17 21164299 21164454 -64274026 - L1MB5 LINE L1 -5303 1239 1079 27 49 0 0 chr17 21164458 21164499 -64273981 + AT_rich Low_complexity Low_complexity 1 41 0 2209 124 0 3 chr17 21164499 21164798 -64273682 - AluSx SINE Alu -14 298 1 610 224 9 9 chr17 21164825 21164941 -64273539 - FLAM_C SINE Alu -26 117 2 2054 189 32 18 chr17 21164941 21165381 -64273099 - L1MB5 LINE L1 -5445 1097 652 1249 118 0 0 chr17 21165539 21165709 -64272771 + AluSg/x SINE Alu 141 310 0 297 246 0 0 chr17 21165755 21165820 -64272660 - MLT1L LTR MaLR -5 610 546 462 306 128 19 chr17 21165927 21166192 -64272288 - MLT1L LTR MaLR -317 298 5 706 259 155 0 chr17 21166265 21166458 -64272022 - MER58A DNA MER1_type 0 224 2 2345 74 0 13 chr17 21168378 21168688 -64269792 - AluY SINE Alu -5 306 1 518 269 9 0 chr17 21168704 21168812 -64269668 - FAM SINE Alu -76 109 1 2652 178 17 50 chr17 21169173 21169753 -64268727 - MER68 LTR ERV1 -1 561 1 23 0 0 0 chr17 21169789 21169812 -64268668 + AT_rich Low_complexity Low_complexity 1 23 0 2073 167 19 19 chr17 21170338 21170752 -64267728 - L1MC1 LINE L1 -14 6319 5906 538 153 0 0 chr17 21171735 21171820 -64266660 - Tigger7 DNA MER2_type 0 2587 2503 22 0 0 0 chr17 21172541 21172563 -64265917 + AT_rich Low_complexity Low_complexity 1 22 0 373 211 0 0 chr17 21172564 21172659 -64265821 - Charlie1 DNA MER1_type -45 2716 2622 2406 62 3 0 chr17 21172668 21172976 -64265504 + AluY SINE Alu 1 309 -2 557 235 129 0 chr17 21173021 21173191 -64265289 - Charlie1 DNA MER1_type -2562 199 8 2539 54 0 0 chr17 21173317 21173615 -64264865 + AluY SINE Alu 1 298 -13 23 54 0 0 chr17 21173855 21173892 -64264588 + AT_rich Low_complexity Low_complexity 1 37 0 2110 119 0 10 chr17 21174952 21175246 -64263234 + AluSg SINE Alu 16 306 -4 224 200 22 0 chr17 21175819 21175864 -64262616 + L2 LINE L2 3263 3308 -5 28 29 0 0 chr17 21176084 21176119 -64262361 + AT_rich Low_complexity Low_complexity 1 35 0 21 36 0 0 chr17 21176811 21176839 -64261641 + AT_rich Low_complexity Low_complexity 1 28 0 2223 123 0 19 chr17 21179204 21179528 -64258952 + 7SLRNA srpRNA srpRNA 3 320 0 27 0 0 0 chr17 21180617 21180644 -64257836 + AT_rich Low_complexity Low_complexity 1 27 0 2245 119 10 0 chr17 21180983 21181293 -64257187 + AluSp SINE Alu 1 313 0 384 284 94 24 chr17 21181386 21181640 -64256840 + L1MC2 LINE L1 5388 5659 -462 238 198 35 23 chr17 21181726 21181812 -64256668 + (TATATG)n Simple_repeat Simple_repeat 4 90 0 288 277 0 0 chr17 21182275 21182340 -64256140 - MER58A DNA MER1_type 0 224 160 280 348 11 0 chr17 21182346 21182435 -64256045 - MER58A DNA MER1_type -17 90 1 2890 284 91 20 chr17 21183007 21184057 -64254423 + L2 LINE L2 1778 2901 -413 632 296 154 46 chr17 21184083 21184536 -64253944 + L2 LINE L2 2806 3307 -6 237 65 0 0 chr17 21184592 21184623 -64253857 + (A)n Simple_repeat Simple_repeat 1 31 0 243 0 0 0 chr17 21185505 21185532 -64252948 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2362 42 42 0 chr17 21186100 21186386 -64252094 - AluY SINE Alu -13 298 1 2244 90 20 0 chr17 21186391 21186692 -64251788 - AluSx SINE Alu -5 307 1 2395 77 0 16 chr17 21186696 21187008 -64251472 - AluSq SINE Alu -6 307 1 1086 155 0 12 chr17 21187582 21187750 -64250730 + FRAM SINE Alu 1 166 0 299 145 0 48 chr17 21187790 21187852 -64250628 - L1M4 LINE L1 -884 5262 5204 2215 120 3 3 chr17 21188000 21188308 -64250172 + AluSx SINE Alu 2 309 -3 606 197 57 0 chr17 21188430 21188598 -64249882 - AluY SINE Alu 0 328 154 1296 119 0 6 chr17 21188683 21188859 -64249621 - AluJb SINE Alu -137 175 1 1106 157 0 0 chr17 21238881 21239047 -64199433 + AluSg/x SINE Alu 130 295 -17 2971 179 24 8 chr17 21239047 21239632 -64198848 + L1MC2 LINE L1 5742 6335 -9 1389 181 126 4 chr17 21239634 21239783 -64198697 - AluJb SINE Alu -9 303 174 240 35 0 0 chr17 21239783 21239812 -64198668 + (TTTA)n Simple_repeat Simple_repeat 3 31 0 1389 181 126 4 chr17 21239812 21239932 -64198548 - AluJb SINE Alu -138 174 1 185 156 0 44 chr17 21239971 21240016 -64198464 + CT-rich Low_complexity Low_complexity 3 45 0 1855 145 3 3 chr17 21240752 21241054 -64197426 - AluJo SINE Alu 0 302 1 419 241 90 28 chr17 21241054 21241266 -64197214 + MER113 DNA MER1_type? 121 345 -176 2664 45 0 6 chr17 21241508 21241821 -64196659 - AluY SINE Alu 0 311 1 272 250 56 56 chr17 21242016 21242095 -64196385 + MER20B DNA MER1_type 674 755 -28 2350 100 0 7 chr17 21242095 21242396 -64196084 + AluSx SINE Alu 1 299 -13 272 250 56 56 chr17 21242396 21242424 -64196056 + MER20B DNA MER1_type 754 781 -2 2106 144 0 0 chr17 21242491 21242803 -64195677 + AluSx SINE Alu 1 312 0 357 200 0 0 chr17 21242803 21242873 -64195607 + L1M4 LINE L1 5049 5118 -1028 1972 149 7 3 chr17 21242966 21243261 -64195219 + AluSx SINE Alu 1 296 -16 395 157 0 0 chr17 21243262 21243332 -64195148 + L1M4 LINE L1 5362 5431 -753 1817 145 13 44 chr17 21243764 21244081 -64194399 - AluJb SINE Alu -5 307 1 197 269 185 76 chr17 21244836 21244955 -64193525 - MIR3 SINE MIR -37 171 40 1925 135 48 0 chr17 21245215 21245504 -64192976 - AluSx SINE Alu -9 303 1 2372 97 0 13 chr17 21245511 21245820 -64192660 - AluSx SINE Alu -7 305 1 2656 106 3 13 chr17 21246002 21246381 -64192099 - THE1C LTR MaLR 0 375 1 210 37 0 0 chr17 21246948 21246975 -64191505 + (TTTTG)n Simple_repeat Simple_repeat 1 27 0 1797 141 14 40 chr17 21247339 21247636 -64190844 - AluJb SINE Alu -10 302 14 257 301 54 0 chr17 21247964 21248057 -64190423 + MER94 DNA DNA 2 99 -35 210 250 83 0 chr17 21248348 21248396 -64190084 - L2 LINE L2 -14 3258 3207 319 356 17 8 chr17 21248528 21248646 -64189834 + MIR3 SINE MIR 70 188 -20 2090 197 101 32 chr17 21248650 21249157 -64189323 - MLT1F LTR MaLR 0 542 1 1944 139 9 22 chr17 21249629 21249945 -64188535 - AluSx SINE Alu 0 312 1 269 128 0 0 chr17 21250195 21250234 -64188246 + Alu SINE Alu 6 44 -258 2277 86 0 43 chr17 21250555 21250880 -64187600 + AluY SINE Alu 1 311 0 700 101 16 78 chr17 21250884 21251013 -64187467 - FLAM_C SINE Alu -21 122 2 288 307 117 22 chr17 21251015 21251152 -64187328 - MIR SINE MIR -68 194 45 194 211 0 0 chr17 21251573 21251611 -64186869 + MIR SINE MIR 108 145 -117 2381 93 0 17 chr17 21251893 21252193 -64186287 + AluSg SINE Alu 1 295 -15 1116 159 59 44 chr17 21252323 21252594 -64185886 - L1MB7 LINE L1 -16 6168 5894 2582 64 0 0 chr17 21252595 21252906 -64185574 + AluY SINE Alu 1 311 0 629 160 48 0 chr17 21252906 21253031 -64185449 - L1MB7 LINE L1 -475 5709 5579 253 204 0 0 chr17 21254161 21254205 -64184275 + L2 LINE L2 3251 3294 -19 204 133 17 96 chr17 21254999 21255051 -64183429 - MIR SINE MIR -65 143 91 267 253 46 11 chr17 21255274 21255361 -64183119 - L2 LINE L2 -36 3236 3147 1592 182 64 0 chr17 21255592 21255872 -64182608 + AluJo SINE Alu 1 298 -14 2458 66 3 10 chr17 21256355 21256657 -64181823 - AluY SINE Alu -11 300 1 335 312 39 13 chr17 21257012 21257166 -64181314 - L2 LINE L2 -215 3057 2900 263 248 184 28 chr17 21257503 21257644 -64180836 + MER5B DNA MER1_type 21 172 -6 22 56 0 0 chr17 21258056 21258092 -64180388 + AT_rich Low_complexity Low_complexity 1 36 0 1734 137 61 4 chr17 21258473 21258736 -64179744 - AluJb SINE Alu -34 278 1 1996 146 13 3 chr17 21258897 21259199 -64179281 + AluSx SINE Alu 8 312 0 268 184 0 40 chr17 21259201 21259277 -64179203 + GA-rich Low_complexity Low_complexity 3 75 0 2265 102 3 0 chr17 21259311 21259604 -64178876 + AluSx SINE Alu 15 308 -4 437 33 0 17 chr17 21260461 21260521 -64177959 + (TTTA)n Simple_repeat Simple_repeat 2 60 0 218 208 0 75 chr17 21260548 21260601 -64177879 + MER5B DNA MER1_type 1 49 -129 21 0 0 0 chr17 21260601 21260622 -64177858 + AT_rich Low_complexity Low_complexity 1 21 0 1144 179 71 17 chr17 21260794 21261030 -64177450 + L1MB5 LINE L1 5893 6131 -52 1633 164 3 38 chr17 21261030 21261323 -64177157 + AluJb SINE Alu 1 283 -29 1144 179 71 17 chr17 21261323 21261378 -64177102 + L1MB5 LINE L1 6131 6182 -1 326 190 150 10 chr17 21261449 21261549 -64176931 + L1MC5 LINE L1 7691 7804 -157 2208 147 0 11 chr17 21261890 21262251 -64176229 + MER46B DNA MER2_type 5 236 0 1944 119 0 0 chr17 21262297 21262549 -64175931 + AluSx SINE Alu 1 252 -60 187 292 62 15 chr17 21262761 21262826 -64175654 + L2 LINE L2 417 484 -2830 * 247 282 42 14 chr17 21262806 21262877 -64175603 + L2 LINE L2 3194 3266 -6 408 319 28 6 chr17 21263338 21263520 -64174960 - Charlie8 DNA MER1_type -2141 276 91 1537 194 74 62 chr17 21263529 21263635 -64174845 + MLT1D LTR MaLR 13 116 -389 2209 104 0 7 chr17 21263635 21263934 -64174546 + AluSx SINE Alu 1 297 -15 1537 194 74 62 chr17 21263934 21264312 -64174168 + MLT1D LTR MaLR 116 503 -2 192 262 0 0 chr17 21264422 21264464 -64174016 + L2 LINE L2 3199 3240 -32 348 266 89 13 chr17 21265005 21265163 -64173317 + L2 LINE L2 2893 3062 -210 348 43 0 0 chr17 21265588 21265634 -64172846 + (TTAA)n Simple_repeat Simple_repeat 1 46 0 194 226 0 75 chr17 21265661 21265714 -64172766 + MER5B DNA MER1_type 1 49 -129 21 0 0 0 chr17 21265714 21265735 -64172745 + AT_rich Low_complexity Low_complexity 1 21 0 1627 181 7 11 chr17 21265782 21266063 -64172417 - AluJo SINE Alu -22 290 11 2573 72 0 0 chr17 21266080 21266387 -64172093 - AluY SINE Alu -4 307 1 272 254 9 146 chr17 21266395 21266455 -64172025 - MER5B DNA MER1_type -83 95 55 828 188 0 0 chr17 21266455 21266588 -64171892 + FLAM_A SINE Alu 1 133 0 272 254 9 146 chr17 21266588 21266637 -64171843 - MER5B DNA MER1_type -123 55 1 2139 119 10 3 chr17 21267674 21267968 -64170512 - AluSx SINE Alu -16 296 1 401 235 17 61 chr17 21268430 21268545 -64169935 + MIR3 SINE MIR 94 203 -5 2593 66 0 0 chr17 21269459 21269762 -64168718 - AluY SINE Alu -8 303 1 263 212 61 71 chr17 21270188 21270287 -64168193 + L2 LINE L2 3144 3241 -31 1086 340 88 69 chr17 21270802 21271685 -64166795 - L1MC4a LINE L1 -1644 6164 5265 403 294 68 0 chr17 21271935 21272081 -64166399 - MLT1I LTR MaLR -8 401 246 201 74 0 0 chr17 21272092 21272119 -64166361 + (TTTTG)n Simple_repeat Simple_repeat 4 30 0 2238 111 3 0 chr17 21272131 21272420 -64166060 + AluSx SINE Alu 1 290 -22 2264 87 3 11 chr17 21272422 21272732 -64165748 + AluSp SINE Alu 1 308 0 505 115 29 29 chr17 21272776 21272880 -64165600 - L1MB8 LINE L1 -100 6078 5975 2057 190 47 2 chr17 21272893 21273320 -64165160 - L1MB7 LINE L1 -104 6080 5635 325 303 115 0 chr17 21273394 21273516 -64164964 - MLT1I LTR MaLR -256 153 18 227 246 0 43 chr17 21274158 21274227 -64164253 - MER5A DNA MER1_type -110 79 14 338 318 148 40 chr17 21275279 21275603 -64162877 - MLT1K LTR MaLR -90 498 140 1819 142 6 77 chr17 21276129 21276440 -64162040 - AluJb SINE Alu -23 289 1 2168 133 3 0 chr17 21277049 21277358 -64161122 + AluSq SINE Alu 3 312 -1 1751 57 0 9 chr17 21277719 21277929 -64160551 + AluY SINE Alu 1 208 -103 963 144 6 44 chr17 21278421 21278581 -64159899 - FRAM SINE Alu -21 155 2 22 0 0 0 chr17 21278627 21278649 -64159831 + AT_rich Low_complexity Low_complexity 1 22 0 401 350 45 22 chr17 21278658 21278948 -64159532 + L1ME3A LINE L1 5609 5910 -252 747 296 10 5 chr17 21280062 21280268 -64158212 + MIR SINE MIR 8 214 -48 207 175 0 0 chr17 21281144 21281184 -64157296 - MIR SINE MIR -14 248 209 763 148 0 0 chr17 21283448 21283563 -64154917 - FLAM_C SINE Alu -18 115 1 2678 82 3 0 chr17 21283572 21283926 -64154554 - THE1A LTR MaLR 0 355 1 1803 164 41 0 chr17 21283932 21284224 -64154256 - AluSx SINE Alu -8 304 1 2432 77 10 0 chr17 21284724 21285021 -64153459 - AluY SINE Alu -10 301 2 2135 147 0 6 chr17 21285113 21285426 -64153054 - AluSx SINE Alu -1 311 1 3448 159 138 21 chr17 21285932 21286703 -64151777 - MER21B LTR ERV1 0 863 3 192 250 0 0 chr17 21287169 21287213 -64151267 + L2 LINE L2 3143 3186 -86 214 273 156 0 chr17 21287225 21287302 -64151178 - L2 LINE L2 0 3272 3184 26 30 0 0 chr17 21287743 21287776 -64150704 + AT_rich Low_complexity Low_complexity 1 33 0 462 204 136 10 chr17 21287776 21287879 -64150601 - FLAM_C SINE Alu -25 118 3 589 266 229 8 chr17 21293562 21293916 -64144564 - L2 LINE L2 -18 3295 2864 190 214 0 71 chr17 21294147 21294203 -64144277 - L2 LINE L2 -509 2805 2754 949 271 87 28 chr17 21294241 21294362 -64144118 - L2 LINE L2 -656 2658 2546 2668 65 0 0 chr17 21294362 21294671 -64143809 - AluY SINE Alu -2 309 1 949 271 87 28 chr17 21294671 21294985 -64143495 - L2 LINE L2 -768 2546 2197 2141 117 23 3 chr17 21295013 21295312 -64143168 - AluSx SINE Alu -7 305 1 211 298 48 0 chr17 21295474 21295558 -64142922 - MIR SINE MIR -72 136 49 282 56 0 0 chr17 21295992 21296028 -64142452 + (A)n Simple_repeat Simple_repeat 1 36 0 2518 52 23 10 chr17 21296724 21297034 -64141446 - AluYb8 SINE Alu -4 314 1 2146 102 38 7 chr17 21298391 21298684 -64139796 + AluSq SINE Alu 1 302 -11 1539 161 0 97 chr17 21298687 21298998 -64139482 - AluJb SINE Alu -31 281 1 2268 106 3 10 chr17 21299103 21299406 -64139074 + AluSx SINE Alu 1 301 -11 1815 178 0 10 chr17 21299433 21299731 -64138749 + AluJo SINE Alu 1 295 -17 202 239 28 56 chr17 21300024 21300095 -64138385 + MER5B DNA MER1_type 50 118 -60 392 306 98 16 chr17 21300353 21300546 -64137934 + L2 LINE L2 3102 3310 -3 1458 130 8 71 chr17 21300574 21300640 -64137840 + AluSq SINE Alu 61 130 -178 252 0 0 0 chr17 21300640 21300668 -64137812 + (CA)n Simple_repeat Simple_repeat 2 29 0 1458 130 8 71 chr17 21300668 21300864 -64137616 + AluSq SINE Alu 130 308 0 209 217 29 58 chr17 21301058 21301127 -64137353 + MER5B DNA MER1_type 50 116 -62 2386 95 0 13 chr17 21301452 21301757 -64136723 - AluSx SINE Alu -11 301 1 508 308 100 54 chr17 21301766 21301907 -64136573 - L1ME4a LINE L1 -5 6116 5983 1739 175 13 7 chr17 21301907 21302215 -64136265 - AluJo SINE Alu -2 310 1 508 308 100 54 chr17 21302215 21302404 -64136076 - L1ME4a LINE L1 -138 5983 5771 2236 90 45 0 chr17 21303191 21303480 -64135000 - AluSg SINE Alu -8 302 1 2060 138 0 25 chr17 21303491 21303809 -64134671 - AluSx SINE Alu -2 310 1 747 213 0 18 chr17 21303811 21303975 -64134505 - FRAM SINE Alu -5 161 1 309 344 38 0 chr17 21303997 21304154 -64134326 + MIR SINE MIR 88 250 -12 397 240 61 87 chr17 21304185 21304414 -64134066 - L1ME4a LINE L1 -382 5739 5517 2060 157 93 21 chr17 21305404 21305729 -64132751 - LTR47A LTR ERVL -1 451 88 2488 63 10 3 chr17 21305729 21306030 -64132450 - AluSq SINE Alu -9 304 2 2060 157 93 21 chr17 21306030 21306125 -64132355 - LTR47A LTR ERVL -364 88 1 219 336 47 35 chr17 21306128 21306398 -64132082 - L2 LINE L2 -23 3249 2907 757 181 145 108 chr17 21306436 21306686 -64131794 - MLT1C LTR MaLR -185 205 2 257 271 0 0 chr17 21306788 21306847 -64131633 + L2 LINE L2 2531 2589 -725 260 189 19 19 chr17 21307118 21307171 -64131309 + L2 LINE L2 3171 3223 -90 193 211 88 0 chr17 21307417 21307474 -64131006 + MIR SINE MIR 78 139 -69 308 268 72 0 chr17 21307554 21307651 -64130829 - MIR SINE MIR -70 192 89 3186 86 12 7 chr17 21307676 21308108 -64130372 + MER1A DNA MER1_type 96 529 0 289 278 44 11 chr17 21308115 21308205 -64130275 - MIR SINE MIR -168 94 2 245 246 49 84 chr17 21308438 21308580 -64129900 - L1MC4 LINE L1 -142 7900 7764 2223 107 0 0 chr17 21309127 21309430 -64129050 + AluSg SINE Alu 3 305 0 219 326 32 21 chr17 21310001 21310096 -64128384 - MIR SINE MIR -112 150 55 2043 139 7 19 chr17 21310424 21310734 -64127746 - AluSx SINE Alu -6 306 1 1979 103 0 97 chr17 21312620 21312949 -64125531 - AluSx SINE Alu -15 297 1 2165 119 3 0 chr17 21313384 21313679 -64124801 - AluSq SINE Alu -16 297 2 2221 77 49 7 chr17 21314457 21314743 -64123737 - AluSc SINE Alu -11 298 1 200 0 100 0 chr17 21315837 21315867 -64122613 + T-rich Low_complexity Low_complexity 3 35 0 2336 112 0 0 chr17 21315879 21316191 -64122289 - AluSx SINE Alu 0 312 1 21 0 0 0 chr17 21316649 21316670 -64121810 + AT_rich Low_complexity Low_complexity 1 21 0 622 215 0 0 chr17 21316670 21316791 -64121689 + 7SLRNA srpRNA srpRNA 200 320 0 38 0 0 0 chr17 21316798 21316836 -64121644 + AT_rich Low_complexity Low_complexity 1 38 0 302 263 50 40 chr17 21316950 21317049 -64121431 + L1ME4a LINE L1 6016 6115 -6 329 296 25 50 chr17 21317649 21317808 -64120672 + MIR SINE MIR 102 256 -6 2025 159 88 14 chr17 21320780 21320805 -64117675 - L1MB7 LINE L1 -20 6164 6142 2150 112 20 0 chr17 21320805 21321100 -64117380 - AluSx SINE Alu -11 301 1 2025 159 88 14 chr17 21321100 21321496 -64116984 - L1MB7 LINE L1 -42 6142 5712 364 271 66 26 chr17 21321501 21321652 -64116828 - Charlie8 DNA MER1_type -2259 158 2 278 260 130 42 chr17 21321855 21322047 -64116433 - L1ME4a LINE L1 -81 6040 5832 2497 77 0 10 chr17 21323583 21323895 -64114585 + AluSc SINE Alu 1 309 0 2179 116 7 3 chr17 21324253 21324546 -64113934 + AluSx SINE Alu 1 294 -18 2223 95 0 36 chr17 21324663 21324969 -64113511 - AluSg SINE Alu -15 295 1 2157 109 17 0 chr17 21324974 21325268 -64113212 - AluSq SINE Alu 0 313 15 441 205 114 48 chr17 21325832 21325998 -64112482 + MER5B DNA MER1_type 1 177 -1 190 358 92 17 chr17 21326251 21326371 -64112109 - L2 LINE L2 -5 3308 3180 1518 149 0 0 chr17 21327877 21328098 -64110382 + AluJo SINE Alu 81 301 -11 701 284 60 44 chr17 21328681 21329329 -64109151 + L1ME3A LINE L1 1358 2012 -4516 * 2139 266 96 64 chr17 21329324 21329688 -64108792 + L1ME3A LINE L1 2842 3193 -3233 2201 113 3 0 chr17 21329688 21329972 -64108508 - AluSp SINE Alu -28 285 1 2139 266 96 64 chr17 21329972 21331675 -64106805 + L1ME3A LINE L1 3193 4975 -1451 2598 65 0 3 chr17 21331741 21332048 -64106432 + AluY SINE Alu 1 306 -5 694 296 65 37 chr17 21332207 21332558 -64105922 + L1ME3A LINE L1 5602 5962 -492 455 259 15 8 chr17 21332600 21332731 -64105749 + L1ME3A LINE L1 6091 6222 -228 1819 147 11 11 chr17 21332736 21333022 -64105458 + AluJb SINE Alu 6 291 -21 221 267 0 17 chr17 21333025 21333085 -64105395 + (CATATA)n Simple_repeat Simple_repeat 4 62 0 1500 129 4 33 chr17 21336059 21336299 -64102181 + AluJo SINE Alu 6 238 -74 215 0 67 0 chr17 21336332 21336362 -64102118 + (TTTTG)n Simple_repeat Simple_repeat 1 32 0 508 258 19 7 chr17 21336520 21336675 -64101805 - L1ME LINE L1 -371 5750 5594 256 354 37 19 chr17 21337976 21338137 -64100343 + L2 LINE L2 2887 3050 -222 229 288 45 0 chr17 21338779 21338845 -64099635 + MER103 DNA DNA 16 84 -82 306 256 26 60 chr17 21338994 21339111 -64099369 + MIR SINE MIR 35 147 -115 305 250 25 67 chr17 21339109 21339229 -64099251 - L2 LINE L2 0 3272 3158 * 244 250 0 0 chr17 21343007 21343055 -64095425 - MLT1J2 LTR MaLR -139 311 264 558 287 207 0 chr17 21343956 21344280 -64094200 + MLT1G1 LTR MaLR 205 595 0 402 259 42 0 chr17 21345121 21345264 -64093216 - MLT1J1 LTR MaLR -277 169 21 1155 77 0 0 chr17 21345504 21345647 -64092833 - AluSg/x SINE Alu -21 291 149 1552 108 0 43 chr17 21345647 21345878 -64092602 + AluSg/x SINE Alu 84 304 -8 361 255 27 40 chr17 21346035 21346184 -64092296 + L1MC5 LINE L1 7782 7928 -33 329 283 183 26 chr17 21346791 21347173 -64091307 - L2 LINE L2 -2157 1157 716 384 243 178 30 chr17 21347174 21347376 -64091104 - L2 LINE L2 -2854 460 229 232 169 0 0 chr17 21348596 21348638 -64089842 + MIR SINE MIR 113 153 -109 219 341 11 11 chr17 21350368 21350456 -64088024 - L2 LINE L2 -573 2741 2654 406 215 125 69 chr17 21350456 21350600 -64087880 + MLT1D LTR MaLR 5 156 -349 716 206 96 27 chr17 21350619 21350838 -64087642 + MLT1D LTR MaLR 272 505 0 214 271 155 43 chr17 21351732 21351939 -64086541 + L2 LINE L2 2813 3042 -271 270 244 39 5 chr17 21353555 21353651 -64084829 + MIR SINE MIR 90 254 -8 1093 310 158 25 chr17 21353779 21354418 -64084062 - L1ME3A LINE L1 -219 5951 5148 2147 123 13 28 chr17 21354418 21354735 -64083745 - AluJo SINE Alu 0 312 1 1093 310 158 25 chr17 21354735 21355027 -64083453 - L1ME3A LINE L1 -1022 5148 4896 1303 48 0 0 chr17 21355030 21355177 -64083303 + AluY SINE Alu 147 293 -18 1543 132 4 18 chr17 21355182 21355317 -64083163 + AluSx SINE Alu 1 133 -179 2330 110 10 0 chr17 21355317 21355625 -64082855 + AluSx SINE Alu 1 311 -1 1543 132 4 18 chr17 21355625 21355717 -64082763 + AluSx SINE Alu 133 225 -87 1546 232 102 95 chr17 21355724 21355888 -64082592 - L1ME3A LINE L1 -2089 4057 3896 2337 115 0 0 chr17 21355888 21356193 -64082287 - AluSx SINE Alu -7 305 1 1546 232 102 95 chr17 21356193 21356227 -64082253 - L1ME3A LINE L1 -2250 3896 3864 550 144 183 0 chr17 21356227 21356331 -64082149 - FLAM_C SINE Alu -10 123 1 1546 232 102 95 chr17 21356331 21356933 -64081547 - L1ME3A LINE L1 -2282 3864 3268 2024 169 0 0 chr17 21356933 21357240 -64081240 - AluJo SINE Alu -5 307 1 1546 232 102 95 chr17 21357240 21357402 -64081078 - L1ME3A LINE L1 -2878 3268 3109 2010 118 3 57 chr17 21357402 21357569 -64080911 - AluSq SINE Alu -15 298 154 2308 76 55 0 chr17 21357569 21357860 -64080620 - AluSp SINE Alu -6 307 1 2010 118 3 57 chr17 21357860 21358007 -64080473 - AluSq SINE Alu -159 154 1 2202 121 7 3 chr17 21358007 21358313 -64080167 - AluSg SINE Alu -3 307 1 1546 232 102 95 chr17 21358313 21358350 -64080130 - L1ME3A LINE L1 -3036 3110 3047 526 239 27 38 chr17 21358691 21358763 -64079717 + MER5A DNA MER1_type 5 76 -113 2076 119 6 48 chr17 21358763 21358908 -64079572 + AluSx SINE Alu 2 129 -183 2564 49 7 7 chr17 21358908 21359216 -64079264 + AluY SINE Alu 1 308 -3 2076 119 6 48 chr17 21359216 21359381 -64079099 + AluSx SINE Alu 129 299 -13 526 239 27 38 chr17 21359381 21359492 -64078988 + MER5A DNA MER1_type 76 186 -3 231 268 110 0 chr17 21359507 21359589 -64078891 - MIR SINE MIR -95 167 77 1801 142 62 17 chr17 21360159 21360447 -64078033 - AluSx SINE Alu -11 301 1 267 272 191 17 chr17 21360697 21360858 -64077622 + MIR SINE MIR 15 196 -66 2529 73 0 10 chr17 21360997 21361300 -64077180 - AluSc SINE Alu -8 301 2 379 198 0 25 chr17 21361530 21361611 -64076869 + MIR SINE MIR 71 149 -113 229 323 104 0 chr17 21361724 21361820 -64076660 - L2 LINE L2 -13 3259 3154 2271 108 3 3 chr17 21362058 21362353 -64076127 + AluSx SINE Alu 1 295 -17 2415 66 13 13 chr17 21363152 21363456 -64075024 + AluSx SINE Alu 1 304 -8 412 204 31 10 chr17 21363925 21364023 -64074457 + MIR SINE MIR 37 136 -72 1930 259 49 8 chr17 21365629 21366242 -64072238 + L1ME1 LINE L1 2318 2955 -3191 1972 94 13 82 chr17 21366242 21366560 -64071920 + AluSx SINE Alu 1 296 -16 189 107 0 0 chr17 21367267 21367295 -64071185 + (TTTCC)n Simple_repeat Simple_repeat 3 30 0 379 179 114 0 chr17 21367386 21367526 -64070954 + L1ME1 LINE L1 3126 3281 -2865 * 2271 236 50 43 chr17 21367524 21367628 -64070852 + L1ME1 LINE L1 5479 5581 -585 2435 70 0 10 chr17 21367628 21367930 -64070550 - AluY SINE Alu -12 299 1 2271 236 50 43 chr17 21367930 21368033 -64070447 + L1ME1 LINE L1 5581 5682 -484 1849 116 60 0 chr17 21368033 21368307 -64070173 + AluSx SINE Alu 25 313 0 2271 236 50 43 chr17 21368307 21368523 -64069957 + L1ME1 LINE L1 5682 5895 -271 2108 139 0 16 chr17 21368523 21368832 -64069648 + AluSx SINE Alu 1 304 -8 2271 236 50 43 chr17 21368832 21369084 -64069396 + L1ME1 LINE L1 5895 6162 -4 435 322 80 67 chr17 21369783 21370156 -64068324 + L1ME4a LINE L1 5527 5904 -217 1360 185 80 74 chr17 21370162 21370286 -64068194 - MLT1A1 LTR MaLR 0 365 243 2470 80 3 0 chr17 21370286 21370587 -64067893 + AluSp SINE Alu 1 302 -11 1360 185 80 74 chr17 21370587 21370825 -64067655 - MLT1A1 LTR MaLR -122 243 1 3136 208 87 124 chr17 21370825 21371139 -64067341 - MLT1A1-int LTR MaLR 0 1735 1411 519 186 0 0 chr17 21371139 21371225 -64067255 + AluJ/FLAM SINE Alu 2 87 -225 3136 208 87 124 chr17 21371225 21371924 -64066556 - MLT1A1-int LTR MaLR -324 1411 688 2147 135 20 0 chr17 21371924 21372228 -64066252 - AluJb SINE Alu -2 310 1 3136 208 87 124 chr17 21372228 21372279 -64066201 - MLT1A1-int LTR MaLR -1047 688 637 2177 117 0 23 chr17 21372279 21372588 -64065892 + AluSc SINE Alu 1 302 -7 3136 208 87 124 chr17 21372588 21372628 -64065852 - MLT1A1-int LTR MaLR -1098 637 597 1928 149 3 16 chr17 21372628 21372944 -64065536 - AluJo SINE Alu 0 312 1 3136 208 87 124 chr17 21372944 21373086 -64065394 - MLT1A1-int LTR MaLR -1138 597 450 2142 138 0 3 chr17 21373114 21373411 -64065069 - AluSx SINE Alu -16 296 1 2126 146 0 3 chr17 21373411 21373712 -64064768 - AluJb SINE Alu -12 300 1 1171 181 39 24 chr17 21373712 21373806 -64064674 - MLT1A1-int LTR MaLR -1477 258 167 1808 175 26 79 chr17 21373806 21374209 -64064271 - MSTB1 LTR MaLR 0 432 54 2270 92 10 3 chr17 21374209 21374504 -64063976 - AluSx SINE Alu -15 297 1 1808 175 26 79 chr17 21374504 21374556 -64063924 - MSTB1 LTR MaLR -378 54 1 1171 181 39 24 chr17 21374556 21374715 -64063765 - MLT1A1-int LTR MaLR -1568 167 1 1892 159 50 31 chr17 21374715 21374763 -64063717 - MLT1A1 LTR MaLR 0 365 319 2460 79 0 20 chr17 21374763 21375068 -64063412 - AluSp SINE Alu -14 299 1 1892 159 50 31 chr17 21375068 21375377 -64063103 - MLT1A1 LTR MaLR -46 319 1 1093 116 79 195 chr17 21375781 21376099 -64062381 - AluJo SINE Alu -12 300 20 243 171 0 0 chr17 21376364 21376405 -64062075 - MER34C LTR ERV1 -484 101 61 226 246 15 31 chr17 21376595 21376660 -64061820 + MIR SINE MIR 42 105 -157 959 227 106 0 chr17 21377101 21377374 -64061106 + MER33 DNA MER1_type 1 302 -22 1740 159 14 37 chr17 21377465 21377608 -64060872 + AluJo SINE Alu 1 135 -177 2237 112 0 3 chr17 21377608 21377902 -64060578 + AluSg SINE Alu 1 293 -17 1740 159 14 37 chr17 21377902 21378054 -64060426 + AluJo SINE Alu 135 289 -23 227 252 215 56 chr17 21378086 21378234 -64060246 - MIR SINE MIR -65 143 8 233 277 31 0 chr17 21378694 21378759 -64059721 + MIR3 SINE MIR 114 180 -28 826 141 16 0 chr17 21379374 21379495 -64058985 - AluJb SINE Alu -12 300 178 397 321 107 7 chr17 21379499 21379770 -64058710 - L1ME4a LINE L1 -294 5827 5530 229 264 0 0 chr17 21379888 21379941 -64058539 - L1MC4 LINE L1 -385 7657 7605 829 249 20 10 chr17 21379942 21380139 -64058341 + MER20 DNA MER1_type 1 199 -20 3809 163 87 50 chr17 21380201 21381050 -64057430 - L1MB5 LINE L1 -6 6168 5272 2031 148 0 16 chr17 21381050 21381360 -64057120 - AluJb SINE Alu -7 305 1 3809 163 87 50 chr17 21381360 21381456 -64057024 - L1MB5 LINE L1 -902 5272 5181 1569 226 48 10 chr17 21381441 21381461 -64057019 - L1MB5 LINE L1 -1734 4412 4394 * 2344 86 0 52 chr17 21381461 21381786 -64056694 - AluY SINE Alu -2 309 2 1569 226 48 10 chr17 21381786 21382244 -64056236 - L1MB5 LINE L1 -1752 4394 3916 198 0 0 0 chr17 21382417 21382439 -64056041 + (ATTG)n Simple_repeat Simple_repeat 2 23 0 2203 101 7 0 chr17 21382444 21382721 -64055759 - AluSx SINE Alu -33 279 1 2114 136 3 3 chr17 21382868 21383169 -64055311 + AluJb SINE Alu 1 301 -11 2313 119 0 0 chr17 21383219 21383522 -64054958 + AluSx SINE Alu 1 303 -9 447 290 236 3 chr17 21383799 21384168 -64054312 - L1ME3A LINE L1 -223 5947 5493 2271 66 45 0 chr17 21384211 21384497 -64053983 + AluY SINE Alu 1 299 -12 342 0 0 0 chr17 21384618 21384656 -64053824 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 2347 89 0 7 chr17 21384659 21384952 -64053528 - AluSg SINE Alu -19 291 1 549 246 66 6 chr17 21384961 21385144 -64053336 - L1MD2 LINE L1 -1 6358 6165 309 82 0 0 chr17 21385152 21385201 -64053279 + (TG)n Simple_repeat Simple_repeat 1 49 0 2495 189 58 14 chr17 21385202 21385339 -64053141 - L1MD2 LINE L1 -233 6126 5996 1372 179 110 71 chr17 21385339 21385720 -64052760 - MSTD LTR MaLR 0 396 1 2495 189 58 14 chr17 21385720 21386136 -64052344 - L1MD2 LINE L1 -363 5996 5549 1887 150 3 17 chr17 21386176 21386470 -64052010 - AluJb SINE Alu -22 290 1 24 53 0 0 chr17 21386650 21386688 -64051792 + AT_rich Low_complexity Low_complexity 1 38 0 265 246 9 45 chr17 21386722 21386832 -64051648 - L1ME4a LINE L1 -25 6096 5991 2220 102 0 3 chr17 21387461 21387778 -64050702 + AluSx SINE Alu 1 316 0 3151 182 32 24 chr17 21387778 21388455 -64050025 - L1MB7 LINE L1 -61 6123 5441 2216 82 0 7 chr17 21388477 21388783 -64049697 + AluY SINE Alu 1 304 0 2905 10 0 0 chr17 21390015 21390322 -64048158 - AluYa5 SINE Alu -4 307 1 860 107 0 0 chr17 21392201 21392313 -64046167 + AluSg/x SINE Alu 177 288 -22 366 180 0 0 chr17 21392372 21392433 -64046047 + AluSc SINE Alu 230 290 -9 2515 191 111 49 chr17 21392474 21392910 -64045570 + L1MB5 LINE L1 4462 4870 -1276 2194 110 0 58 chr17 21392910 21393237 -64045243 - AluSx SINE Alu -4 308 1 2515 191 111 49 chr17 21393237 21393583 -64044897 + L1MB5 LINE L1 4870 5193 -953 2016 154 0 3 chr17 21393583 21393876 -64044604 - AluJb SINE Alu -20 292 1 213 39 0 0 chr17 21393885 21393911 -64044569 + (TA)n Simple_repeat Simple_repeat 2 27 0 2434 82 0 0 chr17 21393912 21394206 -64044274 - AluSg SINE Alu -16 294 1 2515 191 111 49 chr17 21394206 21394264 -64044216 + L1MB5 LINE L1 5199 5368 -778 1773 174 43 0 chr17 21394274 21394573 -64043907 + AluSx SINE Alu 1 312 0 495 179 17 60 chr17 21394580 21394738 -64043742 + L1MB5 LINE L1 5339 5500 -666 864 156 0 7 chr17 21394745 21394880 -64043600 + FLAM_A SINE Alu 8 141 -1 2166 190 37 61 chr17 21394880 21395167 -64043313 + L1MB5 LINE L1 5496 5788 -392 1743 151 4 22 chr17 21395167 21395463 -64043017 + AluSx SINE Alu 19 309 0 2166 190 37 61 chr17 21395463 21395694 -64042786 + L1MB5 LINE L1 5788 6023 -157 1993 110 107 19 chr17 21395694 21396004 -64042476 - MER1B DNA MER1_type 0 337 1 2166 190 37 61 chr17 21396004 21396037 -64042443 + L1MB5 LINE L1 6023 6055 -125 2239 129 0 3 chr17 21396037 21396339 -64042141 - AluSg SINE Alu -9 301 1 2166 190 37 61 chr17 21396339 21396460 -64042020 + L1MB5 LINE L1 6055 6122 -58 2115 138 7 0 chr17 21396460 21396764 -64041716 - AluJb SINE Alu -6 306 1 2166 190 37 61 chr17 21396764 21396807 -64041673 + L1MB5 LINE L1 6122 6165 -15 6751 137 114 100 chr17 21396819 21397728 -64040752 + L1MCa LINE L1 30 924 -5502 2267 123 0 0 chr17 21397728 21398030 -64040450 - AluSx SINE Alu -10 302 1 2137 123 3 10 chr17 21398040 21398340 -64040140 - AluSx SINE Alu -14 298 1 6751 137 114 100 chr17 21398340 21398564 -64039916 + L1MCa LINE L1 932 1151 -5275 2340 107 0 0 chr17 21398564 21398862 -64039618 - AluSx SINE Alu -14 298 1 6751 137 114 100 chr17 21398862 21399481 -64038999 + L1MCa LINE L1 1151 1825 -4601 2021 141 3 19 chr17 21399481 21399793 -64038687 - AluJb SINE Alu -5 307 1 6751 137 114 100 chr17 21399793 21399883 -64038597 + L1MCa LINE L1 1825 1912 -4514 1933 67 0 28 chr17 21399942 21400195 -64038285 - AluY SINE Alu -21 290 45 739 125 0 31 chr17 21400234 21400362 -64038118 + AluSp/q SINE Alu 189 312 -1 3273 171 51 48 chr17 21400376 21400735 -64037745 + L1MC1 LINE L1 4802 5158 -1175 1818 164 0 26 chr17 21400735 21401045 -64037435 + AluJb SINE Alu 1 302 -10 3273 171 51 48 chr17 21401045 21401156 -64037324 + L1MC1 LINE L1 5158 5267 -1066 2163 122 0 25 chr17 21401156 21401475 -64037005 + AluY SINE Alu 1 311 0 3273 171 51 48 chr17 21401475 21401741 -64036739 + L1MC1 LINE L1 5267 5531 -802 2050 95 18 21 chr17 21401741 21402055 -64036425 - AluSx SINE Alu 0 313 1 185 0 40 0 chr17 21402057 21402082 -64036398 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 2139 120 3 0 chr17 21402082 21402366 -64036114 - AluSx SINE Alu -27 285 1 3273 171 51 48 chr17 21402366 21403129 -64035351 + L1MC1 LINE L1 5530 6244 -89 715 154 0 64 chr17 21403133 21403289 -64035191 + L1P2 LINE L1 5342 5487 -667 1217 182 5 14 chr17 21403291 21403505 -64034975 + AluJb SINE Alu 86 297 -15 933 177 44 2 chr17 21403507 21403706 -64034774 + L1MB4 LINE L1 5485 5687 -481 1620 168 69 14 chr17 21403727 21404018 -64034462 + AluSx SINE Alu 1 307 -5 26 0 0 0 chr17 21404020 21404046 -64034434 + AT_rich Low_complexity Low_complexity 1 26 0 1056 224 22 18 chr17 21404046 21404318 -64034162 + L1MB4 LINE L1 5661 5933 -247 2649 181 115 95 chr17 21404318 21405230 -64033250 - MER21A LTR ERV1 0 931 2 658 226 31 67 chr17 21405250 21405400 -64033080 + L1MB5 LINE L1 5897 6045 -129 2443 108 0 0 chr17 21405400 21405707 -64032773 + AluSx SINE Alu 1 307 -5 658 226 31 67 chr17 21405707 21405825 -64032655 + L1MB5 LINE L1 6045 6166 -8 273 310 142 0 chr17 21406027 21406140 -64032340 - L2 LINE L2 -171 3101 2973 480 311 7 12 chr17 21406686 21406851 -64031629 + MIR SINE MIR 2 163 -45 1878 143 48 17 chr17 21407392 21407686 -64030794 + AluJb SINE Alu 1 303 -9 351 282 80 0 chr17 21407802 21407965 -64030515 - L1MC4a LINE L1 -1911 5897 5722 2053 140 3 13 chr17 21409104 21409418 -64029062 - AluSx SINE Alu -1 311 1 281 336 44 0 chr17 21410881 21410994 -64027486 + MIR3 SINE MIR 52 169 -39 265 200 30 130 chr17 21411115 21411215 -64027265 + MER5A DNA MER1_type 70 159 -30 2300 98 10 13 chr17 21411564 21411871 -64026609 - AluSg SINE Alu -4 306 1 208 259 0 0 chr17 21411934 21411988 -64026492 + MIR SINE MIR 93 146 -62 212 244 0 0 chr17 21412066 21412107 -64026373 + (TGG)n Simple_repeat Simple_repeat 3 43 0 1094 202 15 0 chr17 21412161 21412364 -64026116 + MER46A DNA MER2_type 31 236 0 319 212 176 0 chr17 21412400 21412485 -64025995 + MIR SINE MIR 33 132 -76 2208 82 9 48 chr17 21413227 21413543 -64024937 + AluSq SINE Alu 1 304 -9 383 229 203 0 chr17 21413730 21413848 -64024632 + MIR SINE MIR 46 187 -75 262 240 0 0 chr17 21414044 21414094 -64024386 - MER91 DNA MER1_type -90 50 1 716 197 24 0 chr17 21414213 21414340 -64024140 + FLAM_A SINE Alu 2 131 -2 2431 60 3 0 chr17 21414342 21414672 -64023808 + AluSp SINE Alu 1 331 0 2082 156 3 0 chr17 21414883 21415191 -64023289 - AluJb SINE Alu -1 311 3 507 294 15 50 chr17 21415268 21415322 -64023158 - MIR SINE MIR -47 215 161 1855 121 8 4 chr17 21415322 21415586 -64022894 + AluSx SINE Alu 39 303 -9 507 294 15 50 chr17 21415586 21415732 -64022748 - MIR SINE MIR -101 161 22 2899 153 55 76 chr17 21415820 21415872 -64022608 - L1MB5 LINE L1 0 6174 6122 217 0 61 0 chr17 21415872 21415905 -64022575 + (TTTTA)n Simple_repeat Simple_repeat 2 36 0 2326 52 11 0 chr17 21415905 21416176 -64022304 - AluSc SINE Alu -30 279 6 2899 153 55 76 chr17 21416176 21416491 -64021989 - L1MB5 LINE L1 -51 6123 5824 1593 181 39 0 chr17 21416491 21416773 -64021707 - AluJb SINE Alu -15 297 5 2899 153 55 76 chr17 21416773 21417078 -64021402 - L1MB5 LINE L1 -350 5824 5514 233 333 56 0 chr17 21417858 21417966 -64020514 - MIR3 SINE MIR -87 121 8 211 279 107 55 chr17 21418499 21418771 -64019709 + L2 LINE L2 2459 2744 -570 463 229 19 19 chr17 21419129 21419234 -64019246 - MIR3 SINE MIR -27 181 77 503 299 57 0 chr17 21419566 21419723 -64018757 - MIR3 SINE MIR -16 192 27 189 343 29 66 chr17 21419760 21419897 -64018583 + MIR SINE MIR 50 181 -81 202 298 88 61 chr17 21420535 21420716 -64017764 - L2 LINE L2 -40 3232 3047 1427 145 31 4 chr17 21421354 21421581 -64016899 + AluSx SINE Alu 1 233 -79 327 213 246 8 chr17 21421626 21421748 -64016732 - MIR3 SINE MIR -24 184 34 715 177 63 7 chr17 21422288 21422505 -64015975 + L2 LINE L2 2784 3016 -297 557 240 0 32 chr17 21422676 21422830 -64015650 - MER58B DNA MER1_type 0 341 193 184 195 49 0 chr17 21422861 21422902 -64015578 - MIR SINE MIR -3 259 217 * 191 231 0 0 chr17 21422869 21422908 -64015572 - L2 LINE L2 -19 3253 3215 1744 81 0 5 chr17 21423278 21423500 -64014980 + AluSx SINE Alu 1 221 -91 203 328 92 0 chr17 21423598 21423717 -64014763 - L2 LINE L2 -728 2586 2457 287 363 9 18 chr17 21424285 21424398 -64014082 + MIR SINE MIR 70 181 -81 196 333 14 0 chr17 21424825 21424894 -64013586 + MIR3 SINE MIR 90 159 -49 2218 69 49 0 chr17 21424899 21425187 -64013293 + AluSx SINE Alu 1 302 -10 305 313 9 18 chr17 21425355 21425467 -64013013 - MIR SINE MIR -116 146 36 201 158 26 0 chr17 21425755 21425793 -64012687 + GA-rich Low_complexity Low_complexity 1 39 0 209 255 19 85 chr17 21425865 21425971 -64012509 - L2 LINE L2 -304 2968 2870 288 316 103 7 chr17 21426126 21426262 -64012218 + MIR3 SINE MIR 60 208 0 211 209 105 35 chr17 21427351 21427437 -64011043 - MIR SINE MIR -60 148 57 275 247 41 0 chr17 21428339 21428412 -64010068 + L3 LINE CR1 1413 1488 -89 454 305 53 7 chr17 21430236 21430387 -64008093 + MIR SINE MIR 25 182 -80 2310 68 0 23 chr17 21430998 21431305 -64007175 + AluY SINE Alu 1 300 -11 209 121 0 0 chr17 21431342 21431375 -64007105 + MIR SINE MIR 114 146 -62 1977 112 3 41 chr17 21432119 21432291 -64006189 - AluSx SINE Alu -16 296 138 2305 92 0 22 chr17 21432291 21432608 -64005872 - AluSg SINE Alu 0 310 1 1977 112 3 41 chr17 21432608 21432729 -64005751 - AluSx SINE Alu -174 138 14 288 318 0 36 chr17 21432846 21432956 -64005524 + MIR3 SINE MIR 93 198 -10 198 209 141 18 chr17 21433153 21433231 -64005249 - MIR SINE MIR -56 152 90 312 255 43 21 chr17 21433577 21433671 -64004809 - MIR3 SINE MIR -53 155 60 2315 70 0 17 chr17 21433825 21434127 -64004353 + AluSp SINE Alu 1 297 -16 534 121 71 30 chr17 21434213 21434312 -64004168 + L1MB8 LINE L1 6076 6178 0 2319 48 7 7 chr17 21434324 21434614 -64003866 + AluY SINE Alu 1 290 -21 220 195 35 138 chr17 21434629 21434716 -64003764 - MIR3 SINE MIR -6 202 125 304 238 12 25 chr17 21435604 21435684 -64002796 + MIR SINE MIR 68 146 -116 216 268 90 10 chr17 21439208 21439311 -63999169 - MER5A DNA MER1_type -47 131 25 * 229 346 43 43 chr17 21439265 21439453 -63999027 - L3 LINE CR1 -71 1506 1319 189 319 29 0 chr17 21440555 21440624 -63997856 + MIR SINE MIR 59 129 -79 223 200 33 17 chr17 21440925 21440985 -63997495 + MIR SINE MIR 90 150 -58 207 259 48 102 chr17 21441172 21441319 -63997161 + MIR3 SINE MIR 3 141 -67 * 306 352 28 42 chr17 21441287 21441429 -63997051 + MIR SINE MIR 109 248 -14 192 286 39 13 chr17 21441545 21441622 -63996858 - MIR SINE MIR -88 120 42 210 291 175 0 chr17 21441671 21441774 -63996706 - MIR SINE MIR -73 189 69 508 253 209 6 chr17 21442292 21442474 -63996006 - MER20 DNA MER1_type 0 219 1 2351 53 30 0 chr17 21442478 21442777 -63995703 + AluY SINE Alu 1 308 -3 426 267 67 18 chr17 21443643 21443788 -63994692 - MIR SINE MIR -62 146 41 230 293 110 61 chr17 21444386 21444550 -63993930 - MIR SINE MIR -51 211 40 299 309 65 22 chr17 21444840 21444979 -63993501 + MIR3 SINE MIR 50 194 -14 485 309 65 0 chr17 21445699 21445838 -63992642 + MIR SINE MIR 114 261 -1 307 259 99 15 chr17 21445950 21446081 -63992399 - MIR3 SINE MIR -65 143 2 578 302 22 16 chr17 21446203 21446385 -63992095 + L3 LINE CR1 1316 1498 -79 292 255 53 21 chr17 21446457 21446551 -63991929 + L3 LINE CR1 1416 1512 -65 234 329 0 25 chr17 21446540 21446619 -63991861 + L2 LINE L2 3196 3272 0 * 201 239 57 68 chr17 21447629 21447717 -63990763 - MIR SINE MIR -84 124 38 378 228 54 0 chr17 21447907 21447999 -63990481 + MIR SINE MIR 42 138 -70 201 294 35 24 chr17 21448199 21448284 -63990196 - MIR SINE MIR -118 144 59 378 329 146 0 chr17 21448447 21448666 -63989814 + L3 LINE CR1 1231 1481 -96 411 307 26 0 chr17 21449445 21449559 -63988921 - MIR SINE MIR -55 207 91 186 397 0 0 chr17 21449560 21449623 -63988857 + L2 LINE L2 3125 3187 -85 258 333 0 0 chr17 21449734 21449824 -63988656 + MIR3 SINE MIR 102 191 -17 195 305 0 0 chr17 21450700 21450759 -63987721 - MIR SINE MIR -61 147 89 341 273 61 0 chr17 21451082 21451181 -63987299 + MIR3 SINE MIR 88 192 -16 254 210 20 90 chr17 21452061 21452161 -63986319 + MIR3 SINE MIR 95 187 -21 418 230 248 0 chr17 21452175 21452336 -63986144 + MIR SINE MIR 11 211 -51 3687 256 73 40 chr17 21452561 21453151 -63985329 + L1MEc LINE L1 37 606 -5790 694 270 93 0 chr17 21453151 21453355 -63985125 - MER58A DNA MER1_type 0 224 2 3687 256 73 40 chr17 21453355 21454042 -63984438 + L1MEc LINE L1 606 1382 -5014 2230 115 0 0 chr17 21454042 21454346 -63984134 + AluSx SINE Alu 1 304 -8 3687 256 73 40 chr17 21454346 21454677 -63983803 + L1MEc LINE L1 1382 1700 -4696 468 280 51 17 chr17 21455294 21455469 -63983011 + MIR3 SINE MIR 25 205 -3 293 226 95 12 chr17 21456032 21456116 -63982364 - MIR SINE MIR -101 107 17 237 200 0 0 chr17 21456125 21456170 -63982310 - L3 LINE CR1 -109 1468 1424 363 298 53 72 chr17 21456249 21456457 -63982023 - MIR SINE MIR -12 250 47 222 200 226 0 chr17 21456712 21456798 -63981682 - MIR SINE MIR -115 147 37 302 316 17 42 chr17 21456835 21456980 -63981500 + MIR SINE MIR 38 183 -64 2349 92 0 0 chr17 21457415 21457718 -63980762 + AluSg SINE Alu 2 304 -6 509 276 47 75 chr17 21457841 21458055 -63980425 + MIR SINE MIR 40 247 -15 224 195 221 13 chr17 21458224 21458301 -63980179 + MIR3 SINE MIR 87 179 -29 440 339 94 0 chr17 21458714 21458885 -63979595 - MIR3 SINE MIR 0 208 22 231 298 120 38 chr17 21459416 21459574 -63978906 + MIR3 SINE MIR 19 189 -19 347 327 115 6 chr17 21459637 21459793 -63978687 + MIR3 SINE MIR 3 175 -33 186 280 108 65 chr17 21460306 21460399 -63978081 + MIR3 SINE MIR 89 185 -23 219 69 0 0 chr17 21460525 21460554 -63977926 + (TCC)n Simple_repeat Simple_repeat 2 30 0 195 333 90 62 chr17 21460563 21460707 -63977773 - MIR SINE MIR -55 207 60 253 242 0 15 chr17 21460979 21461045 -63977435 - MER117 DNA MER1_type -91 106 42 37 52 0 0 chr17 21462606 21462664 -63975816 + GC_rich Low_complexity Low_complexity 1 58 0 189 0 0 0 chr17 21462688 21462709 -63975771 + (CTGGGG)n Simple_repeat Simple_repeat 2 22 0 25 65 0 0 chr17 21463155 21463201 -63975279 + GC_rich Low_complexity Low_complexity 1 46 0 200 306 0 0 chr17 21463390 21463439 -63975041 - MIR SINE MIR -90 118 70 4281 173 50 32 chr17 21464539 21464647 -63973833 - L1MD2 LINE L1 -88 6271 6166 1517 123 60 96 chr17 21464647 21464949 -63973531 - AluJo SINE Alu -15 297 7 4281 173 50 32 chr17 21464949 21465813 -63972667 - L1MD2 LINE L1 -193 6166 5281 1257 176 0 9 chr17 21465814 21466035 -63972445 - AluJo SINE Alu -7 305 87 1386 235 0 26 chr17 21466037 21466255 -63972225 - L1MD2 LINE L1 -850 5296 5091 2274 206 15 13 chr17 21466255 21466715 -63971765 - MER65C LTR ERV1 0 461 1 1386 235 0 26 chr17 21466715 21466875 -63971605 - L1MD2 LINE L1 -1055 5091 4928 2339 71 0 0 chr17 21466918 21467214 -63971266 - AluY SINE Alu -14 297 2 1938 151 3 3 chr17 21467218 21467529 -63970951 - AluSx SINE Alu -1 311 1 1534 160 15 105 chr17 21467594 21467937 -63970543 - AluJb SINE Alu 0 312 1 197 195 40 121 chr17 21468344 21468493 -63969987 - L2 LINE L2 -292 2980 2844 691 351 34 37 chr17 21469433 21469843 -63968637 - L2 LINE L2 0 3272 2864 182 332 193 25 chr17 21470804 21471006 -63967474 - L2 LINE L2 -1 3312 3077 518 329 6 6 chr17 21472013 21472174 -63966306 + MIR SINE MIR 67 227 -35 340 264 19 0 chr17 21473015 21473113 -63965367 + MIR SINE MIR 64 165 -63 1458 88 5 51 chr17 21474295 21474465 -63964015 - L1PB1 LINE L1 -17 6134 5975 1950 125 35 0 chr17 21474465 21474754 -63963726 - AluSx SINE Alu -13 299 1 1458 88 5 51 chr17 21474754 21474800 -63963680 - L1PB1 LINE L1 -176 5975 5928 223 297 0 0 chr17 21475570 21475634 -63962846 + MIR SINE MIR 80 143 -119 258 401 154 7 chr17 21476742 21477014 -63961466 + L2 LINE L2 2961 3272 0 261 336 123 0 chr17 21477208 21477354 -63961126 - L2 LINE L2 -262 3010 2847 504 281 99 26 chr17 21477355 21477547 -63960933 - L2 LINE L2 0 3313 3108 208 114 0 68 chr17 21478516 21478560 -63959920 + (CCCCCA)n Simple_repeat Simple_repeat 4 44 0 202 244 106 65 chr17 21480220 21480343 -63958137 + MIR3 SINE MIR 14 141 -67 180 328 147 17 chr17 21480792 21480908 -63957572 + MIR3 SINE MIR 8 138 -70 306 239 91 0 chr17 21481053 21481141 -63957339 + MIR SINE MIR 45 140 -68 364 228 13 0 chr17 21482158 21482237 -63956243 + MIR SINE MIR 73 152 -110 377 250 154 0 chr17 21482302 21482406 -63956074 - L2 LINE L2 -1 3312 3193 319 215 63 0 chr17 21483015 21483094 -63955386 + MIR SINE MIR 50 133 -75 2417 77 0 3 chr17 21483596 21483908 -63954572 - AluY SINE Alu 0 311 1 2529 54 0 6 chr17 21484017 21484330 -63954150 - AluY SINE Alu 0 311 1 2163 69 34 10 chr17 21484658 21484949 -63953531 + AluY SINE Alu 1 298 -13 270 304 16 48 chr17 21485087 21485212 -63953268 - MIR SINE MIR -97 165 45 207 318 55 0 chr17 21485420 21485536 -63952944 + MIR SINE MIR 60 182 -61 369 0 0 0 chr17 21485901 21485942 -63952538 + (CA)n Simple_repeat Simple_repeat 1 41 0 1486 126 20 157 chr17 21486302 21486652 -63951828 - AluYb8 SINE Alu -16 302 1 257 347 123 6 chr17 21486670 21486840 -63951640 + L2 LINE L2 2923 3112 -160 205 175 25 0 chr17 21487757 21487797 -63950683 + L2 LINE L2 3214 3254 -18 330 26 0 0 chr17 21488644 21488683 -63949797 + (CAG)n Simple_repeat Simple_repeat 3 41 0 268 253 24 36 chr17 21488799 21488882 -63949598 + MIR3 SINE MIR 74 155 -53 398 273 43 29 chr17 21488976 21489115 -63949365 + MIR3 SINE MIR 5 145 -63 530 275 109 24 chr17 21489180 21489391 -63949089 + L2 LINE L2 3064 3292 -21 430 231 48 101 chr17 21490067 21490215 -63948265 - MIR SINE MIR -65 143 5 471 282 26 6 chr17 21490564 21490720 -63947760 + L2 LINE L2 2893 3051 -221 189 250 0 0 chr17 21491421 21491465 -63947015 - MIR SINE MIR -56 152 109 1880 176 126 8 chr17 21491615 21491996 -63946484 + MSTB LTR MaLR 1 426 0 2307 110 0 0 chr17 21492363 21492673 -63945807 - AluSx SINE Alu -2 310 1 809 270 131 29 chr17 21492890 21493545 -63944935 + L2 LINE L2 2539 3272 0 766 237 153 0 chr17 21493768 21493958 -63944522 - MIR SINE MIR -29 233 15 513 269 28 7 chr17 21494593 21494738 -63943742 - MIR SINE MIR -108 154 7 602 198 8 40 chr17 21494854 21494980 -63943500 + FLAM_A SINE Alu 3 124 -9 2212 84 3 3 chr17 21494987 21495285 -63943195 + AluY SINE Alu 1 298 -13 1930 102 7 62 chr17 21495288 21495592 -63942888 - AluSc SINE Alu -21 288 2 1937 162 64 9 chr17 21495891 21496237 -63942243 + MLT1A1 LTR MaLR 1 365 0 255 186 0 0 chr17 21496307 21496350 -63942130 - MIR3 SINE MIR -54 154 112 363 261 166 51 chr17 21496685 21496938 -63941542 + LTR16C LTR ERVL 204 485 -6 281 261 52 78 chr17 21497519 21497634 -63940846 - MIR3 SINE MIR -39 169 58 374 318 52 0 chr17 21497692 21497846 -63940634 + MIR SINE MIR 33 194 -68 245 290 65 36 chr17 21497881 21498019 -63940461 + L2 LINE L2 2949 3090 -182 234 273 34 11 chr17 21498746 21498834 -63939646 - MIR SINE MIR -146 116 27 386 264 61 18 chr17 21499161 21499324 -63939156 + L2 LINE L2 2884 3053 -219 288 248 89 30 chr17 21499863 21499964 -63938516 - MIR3 SINE MIR -54 154 48 21 0 0 0 chr17 21501047 21501068 -63937412 + GC_rich Low_complexity Low_complexity 1 21 0 300 296 78 0 chr17 21501137 21501252 -63937228 - MIR SINE MIR -76 186 63 2089 107 3 13 chr17 21501748 21502048 -63936432 + AluSx SINE Alu 1 297 -15 1956 65 0 4 chr17 21502346 21502592 -63935888 - AluSc SINE Alu 0 309 65 963 278 99 50 chr17 21502810 21503253 -63935227 - L2 LINE L2 -10 3303 2839 213 357 54 0 chr17 21503280 21503392 -63935088 - L2 LINE L2 -626 2688 2571 270 236 0 0 chr17 21504280 21504335 -63934145 + MIR SINE MIR 93 147 -115 281 270 27 0 chr17 21504477 21504551 -63933929 - MIR3 SINE MIR -44 164 89 202 200 0 25 chr17 21504857 21504937 -63933543 + CT-rich Low_complexity Low_complexity 1 78 0 532 269 15 13 chr17 21505004 21505157 -63933323 - MIR SINE MIR -44 164 48 334 349 47 8 chr17 21505922 21506051 -63932429 + L2 LINE L2 2906 3039 -233 1691 115 0 4 chr17 21506107 21506342 -63932138 + AluSx SINE Alu 1 234 -78 1027 136 0 12 chr17 21506349 21506511 -63931969 - AluJb SINE Alu -103 209 50 552 92 0 0 chr17 21506511 21506587 -63931893 + AluSx SINE Alu 229 304 -5 477 263 49 49 chr17 21506588 21506831 -63931649 + L1MC4a LINE L1 6353 6595 -1213 905 183 15 0 chr17 21506847 21507044 -63931436 - L1MC4 LINE L1 -958 7084 6885 803 117 0 0 chr17 21507045 21507156 -63931324 + AluSg/x SINE Alu 189 299 -13 255 242 158 21 chr17 21507569 21507664 -63930816 - MIR SINE MIR -146 116 9 2245 91 0 49 chr17 21507929 21508064 -63930416 + AluSq SINE Alu 1 141 -172 2258 94 3 0 chr17 21508064 21508352 -63930128 + AluSq SINE Alu 1 289 -24 2245 91 0 49 chr17 21508352 21508545 -63929935 + AluSq SINE Alu 141 313 0 1457 133 78 0 chr17 21508545 21508815 -63929665 - MER4B LTR ERV1 -317 293 3 494 231 41 0 chr17 21508923 21509044 -63929436 + MLT1D LTR MaLR 1 126 -379 585 138 0 0 chr17 21509195 21509275 -63929205 - AluSp/q SINE Alu -23 290 211 1232 144 51 0 chr17 21509275 21509470 -63929010 + AluSg/x SINE Alu 106 310 0 1624 176 7 29 chr17 21509490 21509796 -63928684 + AluJo SINE Alu 1 299 -13 3784 236 48 92 chr17 21509797 21510511 -63927969 + L1M4 LINE L1 137 881 -5995 1935 72 4 4 chr17 21510511 21510762 -63927718 - AluSq SINE Alu -62 251 1 3784 236 48 92 chr17 21510762 21511058 -63927422 + L1M4 LINE L1 881 1188 -5688 2258 95 0 25 chr17 21511058 21511375 -63927105 + AluSg1 SINE Alu 1 309 0 3784 236 48 92 chr17 21511375 21511917 -63926563 + L1M4 LINE L1 1188 1752 -5124 2135 102 0 46 chr17 21511917 21512240 -63926240 + AluSg SINE Alu 2 309 -1 3784 236 48 92 chr17 21512240 21512281 -63926199 + L1M4 LINE L1 1752 1633 -5243 1674 79 169 8 chr17 21512281 21512547 -63925933 + AluSg1 SINE Alu 1 309 0 3784 236 48 92 chr17 21512547 21512603 -63925877 + L1M4 LINE L1 1632 1689 -5187 250 246 0 0 chr17 21512579 21512648 -63925832 + L1M4 LINE L1 5430 5498 -1459 * 873 240 0 0 chr17 21512648 21512848 -63925632 + AluJb SINE Alu 113 312 0 1086 190 29 33 chr17 21512873 21513296 -63925184 + L1M4 LINE L1 5854 6282 -713 2262 94 0 16 chr17 21513543 21513851 -63924629 + AluSx SINE Alu 1 303 -9 2184 95 0 7 chr17 21514162 21514458 -63924022 + AluSc SINE Alu 1 294 -15 2330 75 3 0 chr17 21514474 21514768 -63923712 + AluSp SINE Alu 1 295 -18 818 125 0 0 chr17 21514798 21514910 -63923570 + AluJo SINE Alu 14 125 -187 2332 89 0 16 chr17 21514977 21515293 -63923187 + AluY SINE Alu 1 311 0 800 164 0 0 chr17 21515302 21515430 -63923050 + AluJo SINE Alu 130 257 -55 1132 235 67 28 chr17 21515470 21515751 -63922729 - L1MCa LINE L1 -3467 2959 2690 1803 143 30 10 chr17 21515751 21516052 -63922428 - AluSx SINE Alu -5 307 1 1132 235 67 28 chr17 21516052 21516395 -63922085 - L1MCa LINE L1 -3736 2690 2308 2061 131 30 0 chr17 21516422 21516720 -63921760 - AluSc SINE Alu -2 307 1 2088 113 0 19 chr17 21516724 21517043 -63921437 - AluSq SINE Alu 0 313 1 675 208 8 0 chr17 21517052 21517177 -63921303 - FLAM_A SINE Alu -7 126 1 606 148 52 0 chr17 21517178 21517293 -63921187 - L1MC/D LINE L1 -586 5758 5638 428 95 0 0 chr17 21517295 21517358 -63921122 + AluSp/q SINE Alu 244 306 -7 2067 124 7 0 chr17 21517362 21517652 -63920828 + AluSx SINE Alu 1 292 -20 247 208 0 0 chr17 21517652 21517700 -63920780 - MLT1B LTR MaLR -65 325 278 773 142 0 0 chr17 21517761 21517888 -63920592 - LOR1a LTR ERV1 0 497 371 1507 250 65 48 chr17 21517888 21518200 -63920280 + L1M4 LINE L1 3802 4107 -2039 2155 114 0 16 chr17 21518200 21518515 -63919965 - AluSg SINE Alu 0 310 1 1507 250 65 48 chr17 21518515 21518711 -63919769 + L1M4 LINE L1 4107 4323 -1823 1986 112 20 0 chr17 21518711 21519006 -63919474 - AluSq SINE Alu -12 301 1 1507 250 65 48 chr17 21519006 21519061 -63919419 + L1M4 LINE L1 4323 4376 -1770 1495 156 0 23 chr17 21519062 21519325 -63919155 + AluJb SINE Alu 2 258 -54 1885 146 30 35 chr17 21519325 21519695 -63918785 + L1MB4 LINE L1 5813 6180 0 1253 156 12 132 chr17 21519699 21520026 -63918454 - AluJo SINE Alu -12 290 3 1980 14 0 0 chr17 21520307 21520524 -63917956 + U3 snRNA snRNA 1 217 0 1452 128 22 25 chr17 21520814 21521088 -63917392 - AluSx SINE Alu -39 273 1 871 98 0 23 chr17 21521089 21521222 -63917258 - AluSq/x SINE Alu -182 130 1 350 111 42 0 chr17 21521223 21521295 -63917185 + MLT1B LTR MaLR 308 382 -8 801 159 80 0 chr17 21521295 21521458 -63917022 + L1ME3A LINE L1 5583 5758 -586 591 230 0 24 chr17 21521459 21521585 -63916895 + FLAM_A SINE Alu 1 123 -10 21 89 0 0 chr17 21521719 21521775 -63916705 + GC_rich Low_complexity Low_complexity 1 56 0 402 246 138 18 chr17 21522125 21522292 -63916188 + L1ME3A LINE L1 5984 6170 0 372 248 28 28 chr17 21522691 21522800 -63915680 + MIR3 SINE MIR 66 174 -34 553 247 16 6 chr17 21522844 21523026 -63915454 - L1 LINE L1 -2724 3422 3239 1057 216 5 10 chr17 21523435 21523643 -63914837 + MER3 DNA MER1_type 1 207 -2 2217 109 0 0 chr17 21523679 21523981 -63914499 - AluSg SINE Alu -7 303 2 181 280 20 0 chr17 21524004 21524054 -63914426 - MIR SINE MIR -65 143 93 245 264 69 0 chr17 21524369 21524441 -63914039 - MIR SINE MIR -70 192 116 349 274 29 0 chr17 21524929 21525031 -63913449 + MIR SINE MIR 70 174 -88 589 249 96 11 chr17 21525372 21525549 -63912931 - MIR SINE MIR -40 222 31 2001 116 13 17 chr17 21525555 21525719 -63912761 - AluSq SINE Alu -12 301 137 1792 119 45 14 chr17 21525719 21526029 -63912451 - AluSx SINE Alu 0 312 1 2001 116 13 17 chr17 21526029 21526166 -63912314 - AluSq SINE Alu -176 137 1 900 108 8 0 chr17 21526167 21526296 -63912184 - AluSq/x SINE Alu -183 130 1 249 33 0 0 chr17 21526299 21526329 -63912151 + (TG)n Simple_repeat Simple_repeat 1 30 0 1463 157 56 22 chr17 21526334 21526602 -63911878 - AluJb SINE Alu -30 282 6 492 212 38 53 chr17 21526671 21526803 -63911677 + MLT1K LTR MaLR 163 292 -296 2200 95 3 3 chr17 21526806 21527100 -63911380 + AluSq SINE Alu 1 294 -19 1147 101 24 24 chr17 21527101 21527270 -63911210 + AluSp SINE Alu 134 302 -11 656 211 144 39 chr17 21527272 21527480 -63911000 + MLT1K LTR MaLR 289 518 -70 2102 129 0 3 chr17 21527513 21527823 -63910657 + AluSc SINE Alu 1 309 0 1584 186 13 31 chr17 21527837 21528155 -63910325 + AluJb SINE Alu 1 312 0 301 268 160 28 chr17 21528161 21528374 -63910106 - MLT1L LTR MaLR -27 588 348 1946 106 0 0 chr17 21528405 21528659 -63909821 + AluSg SINE Alu 3 256 -54 1662 113 0 0 chr17 21528759 21528990 -63909490 - AluSg SINE Alu -79 231 1 378 164 82 119 chr17 21528995 21529129 -63909351 - MER53 DNA DNA -60 129 1 231 235 0 0 chr17 21529129 21529178 -63909302 + LTR16C LTR ERVL 105 153 -338 466 265 61 0 chr17 21529284 21529391 -63909089 + LTR16C LTR ERVL 352 470 -21 2086 103 0 10 chr17 21529391 21529683 -63908797 - AluSc SINE Alu -20 289 1 466 265 61 0 chr17 21529683 21529707 -63908773 + LTR16C LTR ERVL 470 491 0 460 327 119 0 chr17 21529805 21530007 -63908473 - MIR SINE MIR 0 262 37 2269 64 0 3 chr17 21530090 21530397 -63908083 - AluY SINE Alu 0 306 1 861 137 0 0 chr17 21530403 21530527 -63907953 - FRAM SINE Alu -20 156 33 274 264 199 26 chr17 21530582 21530857 -63907623 + L2 LINE L2 2780 3097 -175 388 259 15 30 chr17 21531000 21531131 -63907349 - L2 LINE L2 -12 3301 3173 368 277 100 42 chr17 21531247 21531312 -63907168 + L2 LINE L2 3029 3089 -224 2407 78 0 0 chr17 21531312 21531620 -63906860 - AluSx SINE Alu -4 308 1 2174 98 3 0 chr17 21531620 21531914 -63906566 - AluSp SINE Alu -17 296 1 368 277 100 42 chr17 21531914 21532107 -63906373 + L2 LINE L2 3088 3303 -10 284 350 24 8 chr17 21532112 21532235 -63906245 - MIR SINE MIR -65 143 19 418 288 88 0 chr17 21532515 21532675 -63905805 - L2 LINE L2 -177 3095 2922 1591 160 7 4 chr17 21532833 21533108 -63905372 + AluJo SINE Alu 28 303 -9 297 128 0 0 chr17 21533111 21533158 -63905322 + MSTB2 LTR MaLR 411 457 0 303 182 42 61 chr17 21533802 21534455 -63904025 + (TGGG)n Simple_repeat Simple_repeat 1 640 0 246 225 70 14 chr17 21534502 21534573 -63903907 + MIR3 SINE MIR 109 183 -25 497 275 31 12 chr17 21534730 21534890 -63903590 - MIR SINE MIR -26 236 74 669 247 12 29 chr17 21535156 21535326 -63903154 + MIR SINE MIR 46 212 -50 1001 105 0 33 chr17 21535374 21535526 -63902954 - AluSq/x SINE Alu -165 147 1 1720 161 25 0 chr17 21535527 21535812 -63902668 - AluJb SINE Alu -20 292 1 182 125 0 0 chr17 21535853 21535885 -63902595 + MIR SINE MIR 106 137 -125 267 213 14 15 chr17 21536205 21536272 -63902208 + MLT1H LTR MaLR 65 160 -273 442 208 62 84 chr17 21536414 21536584 -63901896 + MLT1H LTR MaLR 406 549 0 22 0 0 0 chr17 21536662 21536684 -63901796 + AT_rich Low_complexity Low_complexity 1 22 0 2316 74 6 13 chr17 21537118 21537429 -63901051 + AluSc SINE Alu 1 309 0 1816 122 51 14 chr17 21537450 21537746 -63900734 + AluSx SINE Alu 1 307 -5 2154 84 0 3 chr17 21537752 21538077 -63900403 + AluY SINE Alu 1 324 0 194 128 26 0 chr17 21538083 21538122 -63900358 + (TGAA)n Simple_repeat Simple_repeat 2 41 0 1725 158 10 6 chr17 21538443 21538754 -63899726 - AluJo SINE Alu 0 312 1 1438 133 0 5 chr17 21539064 21539274 -63899206 - AluJb SINE Alu -34 278 70 2294 74 0 22 chr17 21539480 21539791 -63898689 + AluSq SINE Alu 1 304 -9 1082 156 0 6 chr17 21539791 21539970 -63898510 + AluSg/x SINE Alu 132 309 -1 1903 123 3 54 chr17 21540729 21541046 -63897434 + AluJo SINE Alu 1 301 -11 187 304 117 85 chr17 21541360 21541607 -63896873 - L2 LINE L2 -85 3187 2933 518 261 26 10 chr17 21541614 21541809 -63896671 + L1MEd LINE L1 871 1068 -5051 744 135 0 26 chr17 21541850 21542006 -63896474 + (GGA)n Simple_repeat Simple_repeat 3 154 0 287 299 35 0 chr17 21542393 21542480 -63896000 + Charlie8 DNA MER1_type 135 224 -2193 1439 155 23 111 chr17 21542481 21542704 -63895776 - AluJo SINE Alu 0 312 128 2275 98 10 0 chr17 21542704 21543010 -63895470 + AluSg SINE Alu 2 310 0 1439 155 23 111 chr17 21543010 21543128 -63895352 - AluJo SINE Alu -184 128 1 182 222 0 22 chr17 21543141 21543186 -63895294 + L2 LINE L2 2698 2741 -573 548 307 24 10 chr17 21543287 21543588 -63894892 - L1MEd LINE L1 -4896 1488 1175 630 142 0 28 chr17 21543588 21543729 -63894751 + (TCC)n Simple_repeat Simple_repeat 3 139 0 525 256 26 10 chr17 21543770 21543965 -63894515 - L1MEd LINE L1 -5051 1321 1124 187 304 117 85 chr17 21543972 21544219 -63894261 + L2 LINE L2 2933 3187 -85 1903 123 3 54 chr17 21544532 21544849 -63893631 - AluJo SINE Alu -11 301 1 1117 157 0 0 chr17 21545608 21545786 -63892694 - AluSg/x SINE Alu -1 311 134 1886 59 0 8 chr17 21545786 21546025 -63892455 - AluSc SINE Alu -8 301 65 910 278 99 50 chr17 21546243 21546686 -63891794 - L2 LINE L2 -10 3303 2839 261 236 0 0 chr17 21547714 21547769 -63890711 + MIR SINE MIR 94 148 -60 1164 139 6 0 chr17 21548063 21548236 -63890244 - AluSx SINE Alu -138 174 1 228 294 132 37 chr17 21548285 21548421 -63890059 - MIR SINE MIR -113 149 1 1442 119 0 47 chr17 21548657 21548892 -63889588 + AluSg/x SINE Alu 83 306 -6 2093 79 14 7 chr17 21549162 21549462 -63889018 - AluSx SINE Alu 0 304 3 1732 128 0 0 chr17 21549464 21549713 -63888767 - AluSx SINE Alu -8 304 56 2164 98 3 3 chr17 21549728 21550023 -63888457 - AluSx SINE Alu -17 295 1 1032 109 0 0 chr17 21550024 21550161 -63888319 - AluSq/x SINE Alu -175 137 1 2131 110 0 0 chr17 21550553 21550845 -63887635 + AluSx SINE Alu 1 292 -20 2300 39 14 0 chr17 21550847 21551153 -63887327 + AluY SINE Alu 1 310 0 1025 146 12 0 chr17 21551224 21551389 -63887091 - FRAM SINE Alu -4 172 6 2293 93 0 6 chr17 21551564 21551876 -63886604 + AluSg SINE Alu 1 310 0 1265 48 30 6 chr17 21551879 21552044 -63886436 + AluSq SINE Alu 1 169 -144 445 133 24 12 chr17 21552044 21552127 -63886353 - LTR25 LTR ERV1 -686 108 25 1059 61 0 0 chr17 21552141 21552273 -63886207 + AluSg/x SINE Alu 168 299 -13 1515 144 21 103 chr17 21552579 21552918 -63885562 + AluJb SINE Alu 1 311 -1 207 100 0 0 chr17 21552948 21552978 -63885502 + (GA)n Simple_repeat Simple_repeat 1 30 0 449 265 8 23 chr17 21553115 21553247 -63885233 + MIR SINE MIR 4 133 -129 276 276 26 0 chr17 21553689 21553765 -63884715 + CT-rich Low_complexity Low_complexity 3 80 0 440 327 62 64 chr17 21553971 21554408 -63884072 + L2 LINE L2 2837 3272 0 1655 157 27 33 chr17 21554429 21554550 -63883930 + AluJo SINE Alu 5 125 -187 234 0 0 0 chr17 21554550 21554576 -63883904 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 1655 157 27 33 chr17 21554576 21554754 -63883726 + AluJo SINE Alu 125 302 -10 262 338 55 21 chr17 21554898 21555043 -63883437 + MIR SINE MIR 48 197 -65 600 295 145 9 chr17 21555194 21555519 -63882961 + L2 LINE L2 2944 3312 -1 200 297 63 9 chr17 21555902 21556013 -63882467 - MIR3 SINE MIR -82 126 10 275 284 46 17 chr17 21556311 21556453 -63882027 + MIR SINE MIR 25 173 -35 596 238 52 43 chr17 21556492 21556733 -63881747 - MIR SINE MIR 0 262 20 677 296 15 10 chr17 21556747 21556953 -63881527 - MIR SINE MIR -6 256 50 180 0 0 0 chr17 21557186 21557206 -63881274 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2165 95 20 0 chr17 21557210 21557506 -63880974 - AluY SINE Alu -9 302 1 2176 88 34 0 chr17 21557506 21557800 -63880680 - AluSx SINE Alu -6 306 1 391 271 86 29 chr17 21557808 21557948 -63880532 + MIR SINE MIR 49 196 -66 537 342 58 26 chr17 21558233 21558575 -63879905 + L2 LINE L2 2920 3272 0 481 285 165 66 chr17 21558578 21559002 -63879478 - LTR16C LTR ERVL 0 491 26 257 338 13 0 chr17 21559094 21559171 -63879309 + MIR3 SINE MIR 81 158 -50 233 296 136 0 chr17 21559594 21559682 -63878798 + MIR SINE MIR 52 151 -111 238 313 0 0 chr17 21559783 21559850 -63878630 + L2 LINE L2 3206 3272 0 262 246 14 0 chr17 21559865 21559934 -63878546 + L2 LINE L2 3000 3069 -203 213 227 31 41 chr17 21560200 21560297 -63878183 + (CGGG)n Simple_repeat Simple_repeat 4 99 0 245 320 141 6 chr17 21560614 21560770 -63877710 - L2 LINE L2 -173 3099 2923 1450 126 20 157 chr17 21560788 21561138 -63877342 + AluYb8 SINE Alu 1 302 -16 450 94 0 0 chr17 21561498 21561562 -63876918 + (TG)n Simple_repeat Simple_repeat 2 65 0 184 313 60 0 chr17 21561939 21562022 -63876458 - MIR SINE MIR -61 147 60 230 251 22 19 chr17 21562229 21562336 -63876144 + MIR SINE MIR 45 146 -62 2141 69 34 10 chr17 21562492 21562783 -63875697 - AluY SINE Alu -13 298 1 2441 55 7 7 chr17 21563110 21563420 -63875060 + AluY SINE Alu 1 310 -1 2446 68 0 6 chr17 21563531 21563842 -63874638 + AluSg1 SINE Alu 1 309 0 1994 139 0 3 chr17 21563963 21564258 -63874222 + AluSg SINE Alu 1 294 -16 2261 72 0 33 chr17 21564265 21564572 -63873908 + AluSx SINE Alu 1 297 -15 558 167 208 17 chr17 21564616 21564736 -63873744 + FLAM_C SINE Alu 1 143 0 1767 102 0 0 chr17 21564869 21565104 -63873376 - AluSx SINE Alu -45 267 33 1955 117 7 17 chr17 21565225 21565525 -63872955 + AluSq SINE Alu 1 297 -16 2172 108 3 6 chr17 21565528 21565842 -63872638 + AluSp SINE Alu 1 313 0 650 210 36 31 chr17 21565857 21566081 -63872399 - L1MEc LINE L1 -3140 3075 2851 344 205 24 12 chr17 21566308 21566391 -63872089 - L1ME2 LINE L1 -10 6154 6071 517 248 133 39 chr17 21566391 21566417 -63872063 - L1MEc LINE L1 -4930 1466 1444 2215 103 0 3 chr17 21566417 21566718 -63871762 + AluSg1 SINE Alu 1 300 -9 517 248 133 39 chr17 21566718 21567098 -63871382 - L1MEc LINE L1 -4952 1444 1022 1698 153 20 7 chr17 21567116 21567416 -63871064 + AluSx SINE Alu 1 304 -8 2341 61 0 17 chr17 21567418 21567714 -63870766 + AluY SINE Alu 1 291 -20 1910 163 0 0 chr17 21567962 21568262 -63870218 - AluJb SINE Alu -12 300 1 3223 255 135 16 chr17 21570027 21571587 -63866893 + L2 LINE L2 1537 3261 -52 304 175 0 0 chr17 21571612 21571669 -63866811 - MIR SINE MIR -109 153 97 504 292 161 25 chr17 21572453 21572727 -63865753 + L2 LINE L2 2924 3234 -38 3276 98 44 6 chr17 21572753 21573231 -63865249 + MER1A DNA MER1_type 34 529 0 25 0 0 0 chr17 21573605 21573630 -63864850 + AT_rich Low_complexity Low_complexity 1 25 0 254 231 0 0 chr17 21573725 21573777 -63864703 + MIR SINE MIR 124 175 -87 224 286 0 71 chr17 21575100 21575184 -63863296 - MIR3 SINE MIR -22 186 109 243 207 308 5 chr17 21575333 21575460 -63863020 - MIR SINE MIR -58 150 1 373 157 255 10 chr17 21577593 21577695 -63860785 + MIR SINE MIR 81 207 -55 22 0 0 0 chr17 21577717 21577739 -63860741 + AT_rich Low_complexity Low_complexity 1 22 0 265 318 45 8 chr17 21577810 21577942 -63860538 + L2 LINE L2 2914 3050 -222 235 300 22 11 chr17 21577988 21578078 -63860402 - L3 LINE CR1 -95 1482 1392 465 242 68 8 chr17 21578376 21578523 -63859957 - MIR SINE MIR -55 153 28 1148 180 57 2 chr17 21578758 21579107 -63859373 - LTR47A LTR ERVL -8 444 1 261 172 11 97 chr17 21579147 21579178 -63859302 - L1MB5 LINE L1 -9 6165 6133 2340 85 0 0 chr17 21579178 21579483 -63858997 - AluSq SINE Alu -8 305 1 261 172 11 97 chr17 21579483 21579544 -63858936 - L1MB5 LINE L1 -41 6133 6081 227 344 45 26 chr17 21579544 21579698 -63858782 + L2 LINE L2 2942 3098 -174 318 359 14 0 chr17 21579990 21580132 -63858348 + MIR3 SINE MIR 23 166 -42 420 215 48 39 chr17 21580264 21580399 -63858081 + MIR SINE MIR 38 173 -62 1306 150 29 20 chr17 21580534 21580780 -63857700 + AluJo SINE Alu 1 248 -64 460 313 42 38 chr17 21580916 21581178 -63857302 - L2 LINE L2 -140 3173 2911 681 200 17 74 chr17 21581198 21581373 -63857107 - MER63B DNA MER1_type -271 165 1 214 262 12 36 chr17 21581375 21581459 -63857021 - L2 LINE L2 -464 2850 2769 235 111 0 0 chr17 21581530 21581566 -63856914 + MER53 DNA DNA 1 36 -153 * 435 138 11 46 chr17 21581565 21581652 -63856828 - MER53 DNA DNA -83 106 23 * 504 92 11 46 chr17 21581577 21581664 -63856816 + MER53 DNA DNA 106 189 0 266 214 214 17 chr17 21582015 21582132 -63856348 - L2 LINE L2 -502 2812 2673 200 306 5 48 chr17 21583040 21583226 -63855254 + (TG)n Simple_repeat Simple_repeat 2 179 0 300 180 105 22 chr17 21583323 21583425 -63855055 - MIR SINE MIR -61 147 34 258 327 37 9 chr17 21584072 21584179 -63854301 - MIR SINE MIR -35 227 118 208 312 225 12 chr17 21584220 21584566 -63853914 + L2 LINE L2 2804 3223 -49 413 304 170 9 chr17 21584782 21585012 -63853468 + MLT1K LTR MaLR 7 273 -315 2005 114 26 23 chr17 21585255 21585561 -63852919 - AluSx SINE Alu -5 307 1 1047 83 0 0 chr17 21585561 21585693 -63852787 - AluSq/x SINE Alu -177 136 5 280 295 54 0 chr17 21585921 21586033 -63852447 - Charlie8 DNA MER1_type -1926 491 374 482 279 197 0 chr17 21586113 21586296 -63852184 - Charlie8 DNA MER1_type -2152 265 47 845 276 63 11 chr17 21586298 21586584 -63851896 + L1MC/D LINE L1 5522 5822 -1986 3924 131 66 84 chr17 21586588 21586886 -63851594 + L1MB7 LINE L1 5088 5390 -794 1880 162 7 0 chr17 21586886 21587176 -63851304 + AluSx SINE Alu 9 300 -12 3924 131 66 84 chr17 21587176 21587346 -63851134 + L1MB7 LINE L1 5390 5561 -623 1774 139 57 0 chr17 21587346 21587626 -63850854 + AluSx SINE Alu 1 296 -16 3924 131 66 84 chr17 21587626 21588108 -63850372 + L1MB7 LINE L1 5561 6011 -173 3006 120 61 113 chr17 21588108 21588361 -63850119 + MER4B LTR ERV1 1 266 -344 1600 87 39 97 chr17 21588361 21588707 -63849773 + AluSx SINE Alu 1 312 0 3006 120 61 113 chr17 21588707 21589097 -63849383 + MER4B LTR ERV1 266 610 0 3924 131 66 84 chr17 21589097 21589235 -63849245 + L1MB7 LINE L1 6011 6150 -34 180 188 0 0 chr17 21589512 21589544 -63848936 + L2 LINE L2 3281 3312 -1 426 348 76 0 chr17 21591355 21591539 -63846941 + MIR SINE MIR 64 261 -1 237 260 29 29 chr17 21591989 21592020 -63846460 - MIR3 SINE MIR -18 190 160 553 275 42 16 chr17 21592020 21592209 -63846271 - MER117 DNA MER1_type -3 194 1 237 260 29 29 chr17 21592209 21592281 -63846199 - MIR3 SINE MIR -47 161 87 213 291 0 64 chr17 21593688 21593798 -63844682 + G-rich Low_complexity Low_complexity 1 103 0 218 213 0 13 chr17 21593884 21593959 -63844521 + (CCCCAG)n Simple_repeat Simple_repeat 2 75 0 26 30 0 0 chr17 21595306 21595339 -63843141 + AT_rich Low_complexity Low_complexity 1 33 0 307 139 155 0 chr17 21597592 21597683 -63840797 + MIR SINE MIR 77 196 -66 2096 110 0 10 chr17 21597691 21597992 -63840488 + AluSx SINE Alu 1 298 -14 314 219 157 0 chr17 21598051 21598172 -63840308 - MIR SINE MIR -62 146 8 243 387 73 8 chr17 21599894 21600142 -63838338 + L2 LINE L2 2636 2899 -415 264 327 84 0 chr17 21600176 21600283 -63838197 + L2 LINE L2 3127 3242 -30 1309 144 95 23 chr17 21600341 21600604 -63837876 - AluJo SINE Alu -30 282 1 203 293 69 0 chr17 21600605 21600663 -63837817 - L2 LINE L2 -13 3300 3239 967 262 27 0 chr17 21600902 21601123 -63837357 + MIR SINE MIR 32 258 -4 1259 237 159 34 chr17 21601194 21601641 -63836839 + MLT1J LTR MaLR 1 503 -8 386 320 92 40 chr17 21602056 21602306 -63836174 + LTR67 LTR ERVL 14 276 -281 795 301 158 8 chr17 21602812 21603174 -63835306 + LTR33 LTR ERVL 106 521 0 1263 220 108 74 chr17 21603414 21603914 -63834566 + LTR33 LTR ERVL 1 517 -4 687 216 20 0 chr17 21604435 21604583 -63833897 - MLT1B LTR MaLR -239 151 1 413 242 168 11 chr17 21605223 21605413 -63833067 - HAL1 LINE L1 -1107 1400 1181 * 4050 167 31 32 chr17 21605407 21606112 -63832368 - L1MC2 LINE L1 -303 6435 5713 1871 148 3 0 chr17 21606112 21606403 -63832077 - AluJb SINE Alu -17 295 4 4050 167 31 32 chr17 21606403 21606746 -63831734 - L1MC2 LINE L1 -1025 5713 5371 2459 221 27 30 chr17 21606771 21606979 -63831501 - L1MC2 LINE L1 -1886 4654 4447 1059 157 0 0 chr17 21606979 21607138 -63831342 + FRAM SINE Alu 1 159 -7 2459 221 27 30 chr17 21607138 21607603 -63830877 - L1MC2 LINE L1 -2093 4447 3983 825 234 0 0 chr17 21607614 21607789 -63830691 - AluJb SINE Alu -1 311 137 268 235 0 0 chr17 21607792 21607860 -63830620 - L1MC2 LINE L1 -2569 3971 3904 * 2955 189 40 43 chr17 21607843 21608071 -63830409 - L1MC2 LINE L1 -4660 1880 1653 2273 66 0 54 chr17 21608071 21608388 -63830092 - AluY SINE Alu -11 300 1 2955 189 40 43 chr17 21608388 21609036 -63829444 - L1MC2 LINE L1 -4887 1653 1007 1183 127 0 0 chr17 21609036 21609235 -63829245 - AluSx SINE Alu 0 314 116 358 91 152 0 chr17 21609235 21609301 -63829179 + MADE1 DNA Mariner 5 80 0 774 175 0 0 chr17 21609301 21609421 -63829059 - AluSx SINE Alu -192 121 2 3109 217 58 8 chr17 21609437 21610150 -63828330 - L1MC2 LINE L1 -5774 766 19 225 360 0 0 chr17 21610263 21610349 -63828131 - L2 LINE L2 -584 2730 2645 296 223 125 27 chr17 21610832 21610987 -63827493 + MIR SINE MIR 91 262 0 2225 102 3 0 chr17 21611237 21611541 -63826939 + AluSc SINE Alu 1 305 -4 246 238 110 43 chr17 21611546 21611729 -63826751 - MIR SINE MIR -8 254 23 248 202 37 138 chr17 21612472 21612581 -63825899 + MIR SINE MIR 91 188 -74 1078 148 0 16 chr17 21612594 21612763 -63825717 + AluSc SINE Alu 130 297 -12 2395 84 0 0 chr17 21612763 21613073 -63825407 + AluSg SINE Alu 1 310 0 1078 148 0 16 chr17 21613073 21613085 -63825395 + AluSc SINE Alu 297 308 -1 335 281 177 37 chr17 21613406 21613799 -63824681 + L2 LINE L2 2658 3091 -181 1456 124 49 17 chr17 21613896 21614330 -63824150 - LTR54 LTR ERV1 0 510 1 234 268 209 43 chr17 21614624 21614810 -63823670 + MIR SINE MIR 30 257 -5 502 258 139 88 chr17 21615298 21615628 -63822852 + L2 LINE L2 2926 3272 0 368 301 19 0 chr17 21615628 21615784 -63822696 + (TGGA)n Simple_repeat Simple_repeat 2 160 0 180 252 18 9 chr17 21615784 21615815 -63822665 + (TGAA)n Simple_repeat Simple_repeat 2 31 -82 2009 120 0 69 chr17 21615815 21616149 -63822331 + AluSx SINE Alu 1 311 -1 180 252 18 9 chr17 21616149 21616228 -63822252 + (TGAA)n Simple_repeat Simple_repeat 31 113 0 315 264 23 0 chr17 21616250 21616337 -63822143 + (TGGA)n Simple_repeat Simple_repeat 3 91 0 1718 154 137 20 chr17 21616353 21616703 -63821777 + MSTD LTR MaLR 5 395 -1 373 252 59 7 chr17 21616797 21616932 -63821548 - MIR3 SINE MIR -31 177 36 953 211 34 5 chr17 21617080 21617288 -63821192 + MIR SINE MIR 12 225 -37 278 306 0 0 chr17 21617389 21617487 -63820993 + (TG)n Simple_repeat Simple_repeat 1 98 0 204 200 0 0 chr17 21617644 21617689 -63820791 + (TG)n Simple_repeat Simple_repeat 1 45 0 1478 160 101 0 chr17 21618757 21618907 -63819573 - AluJb SINE Alu -17 295 162 420 20 0 0 chr17 21618907 21618956 -63819524 + (TG)n Simple_repeat Simple_repeat 2 50 0 1478 160 101 0 chr17 21618956 21619073 -63819407 - AluJb SINE Alu -150 162 1 438 209 11 0 chr17 21619098 21619189 -63819291 + L2 LINE L2 3178 3269 -3 226 200 36 0 chr17 21619686 21619741 -63818739 + L2 LINE L2 2637 2693 -621 976 295 113 13 chr17 21619745 21620287 -63818193 + MER45C DNA AcHobo 3 633 -320 1778 173 0 7 chr17 21620334 21620617 -63817863 + AluJb SINE Alu 1 305 0 217 0 0 0 chr17 21620617 21620641 -63817839 + (CAA)n Simple_repeat Simple_repeat 1 180 0 2209 104 10 0 chr17 21620645 21620926 -63817554 + AluSp SINE Alu 1 309 -4 201 33 0 33 chr17 21620926 21620956 -63817524 + (TAA)n Simple_repeat Simple_repeat 2 180 0 233 337 36 0 chr17 21621348 21621431 -63817049 + L2 LINE L2 3209 3294 -19 218 367 92 0 chr17 21621474 21621583 -63816897 - MIR SINE MIR -74 134 16 250 209 0 0 chr17 21622657 21622700 -63815780 + L2 LINE L2 3230 3272 0 208 214 54 0 chr17 21622874 21622930 -63815550 + CT-rich Low_complexity Low_complexity 5 63 0 204 282 0 58 chr17 21623655 21623758 -63814722 + L3 LINE CR1 1304 1400 -177 411 327 65 9 chr17 21623909 21624126 -63814354 - MIR SINE MIR -32 230 2 248 341 123 14 chr17 21629625 21629763 -63808717 - MIR3 SINE MIR -54 154 2 378 358 58 9 chr17 21630298 21630524 -63807956 - MIR SINE MIR -4 258 22 1720 238 81 40 chr17 21631142 21631523 -63806957 - MER67C LTR ERV1 0 710 287 2309 93 0 3 chr17 21631523 21631814 -63806666 + AluSg SINE Alu 1 290 -20 1720 238 81 40 chr17 21631814 21632114 -63806366 - MER67C LTR ERV1 -423 287 1 2105 68 0 8 chr17 21632152 21632415 -63806065 - AluY SINE Alu -25 286 26 2321 71 7 0 chr17 21632433 21632749 -63805731 - AluY SINE Alu 0 318 1 1778 164 29 15 chr17 21632859 21633201 -63805279 - MLT1A1 LTR MaLR -9 356 10 2398 104 3 0 chr17 21633506 21633813 -63804667 - AluSp SINE Alu -5 308 1 2077 85 0 39 chr17 21634366 21634476 -63804004 + AluSq SINE Alu 34 147 -166 2190 103 0 3 chr17 21634476 21634758 -63803722 + AluSc SINE Alu 15 295 -14 2077 85 0 39 chr17 21634758 21634928 -63803552 + AluSq SINE Alu 147 303 -10 2139 132 0 0 chr17 21636221 21636524 -63801956 + AluSx SINE Alu 1 303 -9 885 186 23 17 chr17 21636679 21636851 -63801629 - AluJb SINE Alu -3 309 137 2446 149 41 43 chr17 21637145 21637656 -63800824 - LTR54 LTR ERV1 0 510 1 2344 131 50 69 chr17 21637729 21638165 -63800315 - MSTA LTR MaLR 0 428 1 3565 134 31 22 chr17 21638371 21638919 -63799561 - LTR49 LTR ERV1 -2 593 38 2306 76 28 0 chr17 21638919 21639045 -63799435 + AluY SINE Alu 1 122 -189 381 43 0 0 chr17 21639045 21639092 -63799388 + (TAAA)n Simple_repeat Simple_repeat 1 47 0 2306 76 28 0 chr17 21639092 21639253 -63799227 + AluY SINE Alu 122 296 -15 3565 134 31 22 chr17 21639253 21639292 -63799188 - LTR49 LTR ERV1 -557 38 1 1163 145 17 54 chr17 21639314 21639349 -63799131 - LTR49-int LTR ERV1 -15 6316 6281 1990 142 7 7 chr17 21639349 21639645 -63798835 + AluSx SINE Alu 1 296 -16 1163 145 17 54 chr17 21639645 21639850 -63798630 - LTR49-int LTR ERV1 -50 6281 6085 1859 126 0 4 chr17 21639856 21640111 -63798369 - AluSx SINE Alu -58 254 1 1773 109 10 6 chr17 21640111 21640504 -63797976 - LTR49-int LTR ERV1 -391 5940 5503 1225 139 0 25 chr17 21640504 21640705 -63797775 + AluSg/x SINE Alu 115 310 0 3584 197 64 60 chr17 21640705 21640767 -63797713 - LTR49-int LTR ERV1 -3805 2526 2466 2165 120 0 13 chr17 21640767 21641067 -63797413 - AluSq SINE Alu -17 296 1 3584 197 64 60 chr17 21641067 21641132 -63797348 - LTR49-int LTR ERV1 -3865 2466 2403 2375 71 27 0 chr17 21641132 21641427 -63797053 - AluSp SINE Alu -10 303 1 3584 197 64 60 chr17 21641427 21641986 -63796494 - LTR49-int LTR ERV1 -3928 2403 1848 2128 103 65 0 chr17 21641986 21642278 -63796202 + AluSx SINE Alu 1 311 -1 3584 197 64 60 chr17 21642278 21642380 -63796100 - LTR49-int LTR ERV1 -4483 1848 1748 325 70 35 0 chr17 21642380 21642437 -63796043 + (CA)n Simple_repeat Simple_repeat 2 60 0 3584 197 64 60 chr17 21642437 21642659 -63795821 - LTR49-int LTR ERV1 -4583 1748 1509 1983 137 12 63 chr17 21642660 21642886 -63795594 - LTR49-int LTR ERV1 -4989 1342 1145 2082 132 3 0 chr17 21642886 21643174 -63795306 - AluSx SINE Alu -21 291 3 1983 137 12 63 chr17 21643174 21643362 -63795118 - LTR49-int LTR ERV1 -5186 1145 949 1470 114 76 15 chr17 21643359 21643623 -63794857 - LTR49-int LTR ERV1 -6030 301 22 * 250 289 130 48 chr17 21643736 21643855 -63794625 + LTR34 LTR ERV1 274 382 -317 3263 116 94 27 chr17 21643855 21643979 -63794501 - LTR24C LTR ERV1 0 635 521 2188 94 3 13 chr17 21643979 21644277 -63794203 + AluSc SINE Alu 1 295 -14 3263 116 94 27 chr17 21644277 21644747 -63793733 - LTR24C LTR ERV1 -114 521 1 250 289 130 48 chr17 21644747 21644835 -63793645 + LTR34 LTR ERV1 382 498 -201 2918 167 53 6 chr17 21645040 21645606 -63792874 - LTR49 LTR ERV1 -2 651 1 3738 184 56 54 chr17 21645613 21646470 -63792010 + MER21B LTR ERV1 3 861 -2 4628 98 29 5 chr17 21646622 21646851 -63791629 + PABL_B LTR ERV1 1 223 -444 2082 136 3 10 chr17 21646851 21647152 -63791328 - AluSx SINE Alu -13 299 1 4628 98 29 5 chr17 21647152 21647170 -63791310 + PABL_B LTR ERV1 223 239 -428 2487 90 0 3 chr17 21647170 21647480 -63791000 - AluSq SINE Alu -4 309 1 4628 98 29 5 chr17 21647480 21647882 -63790598 + PABL_B LTR ERV1 239 667 0 2065 152 7 0 chr17 21647995 21648297 -63790183 + AluSx SINE Alu 1 304 -8 2151 145 87 79 chr17 21648389 21648894 -63789586 + LTR54 LTR ERV1 1 509 -1 1328 130 5 9 chr17 21649185 21649401 -63789079 + MER4D LTR ERV1 1 215 -688 1275 118 0 22 chr17 21649402 21649580 -63788900 - AluSg/x SINE Alu -16 296 123 3722 146 59 9 chr17 21649580 21650061 -63788419 + MER4D LTR ERV1 206 731 -172 2216 126 0 0 chr17 21650061 21650354 -63788126 - AluSg SINE Alu -17 293 1 3722 146 59 9 chr17 21650354 21650537 -63787943 + MER4D LTR ERV1 731 903 0 1345 235 51 24 chr17 21651358 21651911 -63786569 - L1MEc LINE L1 -3451 2931 2364 613 319 75 59 chr17 21651923 21652229 -63786251 - L1MEc LINE L1 -4944 1619 1319 2173 138 151 0 chr17 21652229 21652599 -63785881 + MSTA LTR MaLR 3 428 0 9528 164 28 13 chr17 21652599 21652645 -63785835 + MSTA-int LTR MaLR 1 45 -1606 6942 79 7 52 chr17 21652645 21654383 -63784097 + SVA Other Other 2 1385 -1 9528 164 28 13 chr17 21654383 21655960 -63782520 + MSTA-int LTR MaLR 45 1651 0 2226 119 132 26 chr17 21655960 21656274 -63782206 + MSTA LTR MaLR 1 365 -63 2379 105 3 0 chr17 21656274 21656578 -63781902 - AluSq SINE Alu -8 305 1 2226 119 132 26 chr17 21656578 21656650 -63781830 + MSTA LTR MaLR 365 428 0 613 319 75 59 chr17 21656650 21656714 -63781766 - L1MEc LINE L1 -5243 1320 1241 289 284 12 12 chr17 21656715 21656877 -63781603 - L1MEc LINE L1 -5423 1140 979 1407 117 8 17 chr17 21656883 21657123 -63781357 - L1MB3 LINE L1 0 6183 5946 1818 226 80 42 chr17 21657170 21657876 -63780604 - L1M4 LINE L1 -4521 1792 993 709 286 0 30 chr17 21658844 21659110 -63779370 - L1M3d LINE L1 -4958 1173 916 818 341 62 15 chr17 21659513 21659915 -63778565 - L1M3d LINE L1 -5720 421 1 1468 153 112 70 chr17 21660035 21660259 -63778221 - MSTB1 LTR MaLR -12 420 172 1206 179 75 101 chr17 21660259 21660567 -63777913 - AluJo SINE Alu -2 300 1 1468 153 112 70 chr17 21660567 21660727 -63777753 - MSTB1 LTR MaLR -260 172 20 1852 232 9 27 chr17 21660763 21661212 -63777268 + LTR47B LTR ERVL 1 441 -2 1805 183 55 48 chr17 21661359 21661817 -63776663 + MLT1C LTR MaLR 1 461 -6 265 335 1 0 chr17 21661859 21661972 -63776508 + L1ME LINE L1 5481 5594 -527 2055 96 59 40 chr17 21662287 21662590 -63775890 + AluSg SINE Alu 1 309 -1 2407 109 0 3 chr17 21662597 21662910 -63775570 + AluSx SINE Alu 1 312 0 1587 203 17 3 chr17 21663249 21663365 -63775115 + AluJo SINE Alu 1 114 -198 216 0 0 0 chr17 21663365 21663389 -63775091 + (CTA)n Simple_repeat Simple_repeat 1 24 0 1587 203 17 3 chr17 21663389 21663572 -63774908 + AluJo SINE Alu 114 304 -8 2228 72 7 4 chr17 21663652 21663988 -63774492 - AluY SINE Alu 0 338 2 2240 169 57 2 chr17 21664765 21665167 -63773313 + MSTB LTR MaLR 3 426 0 737 136 48 136 chr17 21666139 21666356 -63772124 + LTR34 LTR ERV1 1 198 -390 509 166 194 22 chr17 21666377 21666516 -63771964 - MER4C LTR ERV1 0 465 303 1778 122 21 77 chr17 21666585 21666963 -63771517 - MER4A LTR ERV1 -307 357 1 2540 147 42 14 chr17 21666982 21667464 -63771016 + LTR34 LTR ERV1 205 699 0 4249 114 34 44 chr17 21667546 21667682 -63770798 - LTR8A LTR ERV1 0 727 591 2163 123 0 22 chr17 21667682 21668000 -63770480 + AluSx SINE Alu 1 311 -1 4249 114 34 44 chr17 21668000 21668597 -63769883 - LTR8A LTR ERV1 -136 591 1 1244 222 4 4 chr17 21668702 21668941 -63769539 - MER8 DNA MER2_type 0 239 1 1987 106 8 98 chr17 21668971 21669357 -63769123 - MER4B LTR ERV1 -259 351 1 2345 92 10 0 chr17 21669449 21669742 -63768738 - AluSx SINE Alu -16 296 1 2220 74 26 3 chr17 21670297 21670687 -63767793 - LTR7 LTR ERV1 -7 443 1 5287 108 14 14 chr17 21670854 21671633 -63766847 + MER4E LTR ERV1 1 779 0 1947 141 25 0 chr17 21672073 21672357 -63766123 - AluJo SINE Alu -16 296 6 223 361 52 10 chr17 21672762 21672859 -63765621 + MIR SINE MIR 48 148 -114 2885 162 56 192 chr17 21672986 21673998 -63764482 + MSTB-int LTR MaLR 397 1271 -309 1114 162 0 22 chr17 21673998 21674177 -63764303 - AluJb SINE Alu 0 312 138 532 132 60 6 chr17 21674179 21674346 -63764134 + (TA)n Simple_repeat Simple_repeat 1 176 0 793 185 0 0 chr17 21674346 21674465 -63764015 - FLAM_C SINE Alu -23 120 2 1819 123 14 80 chr17 21674466 21674733 -63763747 + MSTB-int LTR MaLR 1325 1565 -86 2004 144 3 0 chr17 21674733 21675025 -63763455 + AluSx SINE Alu 1 293 -19 1819 123 14 80 chr17 21675025 21675107 -63763373 + MSTB-int LTR MaLR 1565 1651 0 1968 153 79 27 chr17 21675107 21675456 -63763024 + MSTB LTR MaLR 1 375 -51 427 136 12 25 chr17 21675456 21675537 -63762943 - MADE1 DNA Mariner 0 80 1 1968 153 79 27 chr17 21675537 21675592 -63762888 + MSTB LTR MaLR 375 426 0 2432 102 0 0 chr17 21675692 21675996 -63762484 + AluSp SINE Alu 2 305 -8 881 251 95 3 chr17 21676362 21676657 -63761823 - L1ME2 LINE L1 -171 5993 5672 2187 101 18 0 chr17 21676987 21677273 -63761207 + AluSx SINE Alu 1 291 -21 1264 176 63 102 chr17 21677336 21677797 -63760683 - LTR47B LTR ERVL 0 443 1 181 333 78 0 chr17 21677806 21677896 -63760584 + MIR3 SINE MIR 101 197 -11 1513 174 17 53 chr17 21678052 21678142 -63760338 - MER74A LTR ERVL 0 558 466 2094 126 3 13 chr17 21678142 21678444 -63760036 + AluSq SINE Alu 5 303 -10 1513 174 17 53 chr17 21678444 21678455 -63760025 - MER74A LTR ERVL -92 466 456 1710 132 83 31 chr17 21678455 21678744 -63759736 + AluJb SINE Alu 1 304 -8 1513 174 17 53 chr17 21678744 21678997 -63759483 - MER74A LTR ERVL -102 456 216 2474 74 0 0 chr17 21679497 21679794 -63758686 - AluSg SINE Alu -13 297 1 2050 118 54 0 chr17 21679797 21680076 -63758404 - AluSx SINE Alu -18 294 1 1660 128 23 122 chr17 21680076 21680420 -63758060 - AluYb8 SINE Alu -7 311 1 854 121 0 32 chr17 21680423 21680547 -63757933 - AluSq/x SINE Alu -179 133 14 2208 94 10 26 chr17 21680662 21680971 -63757509 + AluSc SINE Alu 1 304 -5 291 302 86 0 chr17 21680985 21681101 -63757379 - MIR3 SINE MIR -35 173 48 2108 124 3 7 chr17 21681131 21681430 -63757050 - AluSq SINE Alu -15 298 1 2539 48 3 0 chr17 21681666 21681961 -63756519 - AluY SINE Alu -15 296 1 1841 155 0 0 chr17 21681966 21682244 -63756236 - AluJo SINE Alu -21 291 14 283 355 0 45 chr17 21682248 21682358 -63756122 + L2 LINE L2 3209 3313 0 3489 175 42 61 chr17 21683343 21683367 -63755113 - L1MB8 LINE L1 -7 6407 6384 2578 61 0 13 chr17 21683367 21683679 -63754801 + AluSp SINE Alu 1 308 -5 3489 175 42 61 chr17 21683679 21683920 -63754560 - L1MB8 LINE L1 -30 6384 6140 2107 118 4 0 chr17 21683920 21684199 -63754281 + AluSq SINE Alu 1 280 -33 279 0 0 0 chr17 21684199 21684230 -63754250 + (CA)n Simple_repeat Simple_repeat 1 31 0 3489 175 42 61 chr17 21684230 21684782 -63753698 - L1MB8 LINE L1 -273 6141 5580 231 114 0 0 chr17 21684782 21684817 -63753663 + (TA)n Simple_repeat Simple_repeat 1 35 0 2174 86 3 33 chr17 21684817 21685118 -63753362 - AluSq SINE Alu -21 292 1 3489 175 42 61 chr17 21685118 21685220 -63753260 - L1MB8 LINE L1 -832 5582 5501 1930 156 33 0 chr17 21685225 21685558 -63752922 + MSTB LTR MaLR 83 426 0 6335 209 64 54 chr17 21685558 21686481 -63751999 - L1MB8 LINE L1 -877 5505 4593 840 128 30 30 chr17 21686481 21686614 -63751866 - FLAM_C SINE Alu 0 133 1 6335 209 64 54 chr17 21686614 21686645 -63751835 - L1MB8 LINE L1 -1789 4593 4564 2550 78 0 0 chr17 21686645 21686953 -63751527 + AluSc SINE Alu 1 308 -1 6335 209 64 54 chr17 21686953 21687266 -63751214 - L1MB8 LINE L1 -1818 4564 4256 12089 32 1 18 chr17 21687266 21688676 -63749804 + SVA Other Other 1 1386 0 6335 209 64 54 chr17 21688676 21689326 -63749154 - L1MB8 LINE L1 -2126 4256 3567 704 183 106 95 chr17 21689380 21689511 -63748969 - L1MB8 LINE L1 -3453 2929 2801 2228 112 3 0 chr17 21689511 21689807 -63748673 + AluSp SINE Alu 1 297 -16 704 183 106 95 chr17 21689807 21689948 -63748532 - L1MB8 LINE L1 -3581 2801 2654 1747 144 17 50 chr17 21689957 21690405 -63748075 - Tigger5 DNA MER2_type 0 2323 1 732 165 8 15 chr17 21690440 21690573 -63747907 - FRAM SINE Alu -1 175 44 2066 119 7 0 chr17 21690599 21690877 -63747603 - AluSx SINE Alu -32 280 1 292 200 42 11 chr17 21690888 21690983 -63747497 - L1MB8 LINE L1 -4028 2356 2259 321 189 0 0 chr17 21691005 21691079 -63747401 - L1MA9 LINE L1 -176 6136 6063 * 3015 134 19 74 chr17 21691077 21691232 -63747248 - L1M2 LINE L1 -743 5403 5241 1886 155 13 13 chr17 21691232 21691535 -63746945 - AluSx SINE Alu -9 303 1 3015 134 19 74 chr17 21691535 21691596 -63746884 - L1M2 LINE L1 -905 5241 5178 1853 132 46 30 chr17 21691596 21691899 -63746581 + AluSx SINE Alu 1 308 -4 3015 134 19 74 chr17 21691899 21692482 -63745998 - L1M2 LINE L1 -968 5178 4734 1183 200 59 0 chr17 21692484 21692704 -63745776 - AluJo SINE Alu -8 304 72 799 118 30 0 chr17 21692704 21692839 -63745641 - L1M2 LINE L1 -1401 4745 4607 2207 113 36 3 chr17 21692840 21693141 -63745339 + AluSq SINE Alu 1 311 -2 2474 72 0 20 chr17 21693151 21693457 -63745023 + AluY SINE Alu 1 300 -11 2216 119 19 10 chr17 21693459 21693580 -63744900 + AluSp SINE Alu 1 119 -194 237 98 0 0 chr17 21693580 21693621 -63744859 + (TAAA)n Simple_repeat Simple_repeat 2 42 0 2216 119 19 10 chr17 21693621 21693809 -63744671 + AluSp SINE Alu 119 313 0 2380 99 0 3 chr17 21693908 21694212 -63744268 + AluSx SINE Alu 1 303 -9 993 172 0 23 chr17 21694215 21694389 -63744091 + LTR39 LTR ERV1 614 783 0 1939 256 52 25 chr17 21694390 21694594 -63743886 - L1 LINE L1 -2981 3165 2968 5619 127 16 25 chr17 21694594 21695146 -63743334 + MER4D LTR ERV1 1 543 -360 2163 121 13 10 chr17 21695146 21695451 -63743029 - AluSx SINE Alu -6 306 1 5619 127 16 25 chr17 21695451 21695809 -63742671 + MER4D LTR ERV1 543 903 0 2167 117 17 10 chr17 21695814 21696113 -63742367 - AluSx SINE Alu -11 301 1 1939 256 52 25 chr17 21696113 21696440 -63742040 - L1 LINE L1 -3181 2965 2600 2355 86 10 0 chr17 21696440 21696743 -63741737 - AluSp SINE Alu -7 306 1 1939 256 52 25 chr17 21696743 21696959 -63741521 - L1 LINE L1 -3546 2600 2391 2155 270 56 62 chr17 21697067 21697370 -63741110 - HERV16 LTR ERVL -3642 1354 1051 2457 90 0 0 chr17 21697370 21697671 -63740809 - AluSc SINE Alu -8 301 1 2155 270 56 62 chr17 21697671 21698229 -63740251 - HERV16 LTR ERVL -3945 1051 497 2098 95 3 7 chr17 21698229 21698512 -63739968 - AluSp SINE Alu -2 311 30 2155 270 56 62 chr17 21698512 21698680 -63739800 - HERV16 LTR ERVL -4499 497 330 542 268 32 13 chr17 21698776 21698933 -63739547 - HERV16 LTR ERVL -4828 168 9 661 198 80 0 chr17 21698941 21699103 -63739377 - LTR16A LTR ERVL -1 449 275 363 280 10 0 chr17 21699159 21699259 -63739221 - LTR16A LTR ERVL -324 126 26 343 239 34 148 chr17 21699543 21699585 -63738895 - MER5B DNA MER1_type -3 175 130 2333 105 0 3 chr17 21699585 21699898 -63738582 - AluSx SINE Alu 0 312 1 343 239 34 148 chr17 21699898 21700031 -63738449 - MER5B DNA MER1_type -48 130 20 295 292 21 10 chr17 21700067 21700163 -63738317 - MIR SINE MIR -61 147 51 965 152 6 62 chr17 21700827 21701005 -63737475 + FAM SINE Alu 1 168 -7 2477 42 0 3 chr17 21701016 21701304 -63737176 + AluY SINE Alu 1 287 -24 585 42 0 0 chr17 21701313 21701385 -63737095 + (GA)n Simple_repeat Simple_repeat 2 73 0 357 117 83 0 chr17 21702086 21702146 -63736334 - MSTB1 LTR MaLR 0 432 368 1804 137 0 0 chr17 21702151 21702400 -63736080 + AluSx SINE Alu 1 249 -63 776 102 0 0 chr17 21702400 21702498 -63735982 - AluSg SINE Alu -211 99 2 2413 64 0 68 chr17 21702533 21702859 -63735621 - AluY SINE Alu -7 304 1 2479 68 14 0 chr17 21703314 21703608 -63734872 - AluSp SINE Alu -15 298 1 725 116 192 27 chr17 21703822 21703968 -63734512 + MLT1B LTR MaLR 1 170 -220 1499 191 62 35 chr17 21704190 21704530 -63733950 + MSTD LTR MaLR 1 349 -47 797 299 88 52 chr17 21704602 21705183 -63733297 + L1M4 LINE L1 3 604 -5938 2389 101 0 0 chr17 21705183 21705490 -63732990 + AluSc SINE Alu 1 307 -2 2164 101 30 0 chr17 21705499 21705795 -63732685 + AluSx SINE Alu 1 305 -7 259 73 24 0 chr17 21705799 21705840 -63732640 + L1MB7 LINE L1 5738 5779 -399 1860 74 22 0 chr17 21705840 21706070 -63732410 + AluSx SINE Alu 1 235 -77 514 198 0 0 chr17 21706070 21706161 -63732319 + L1MB7 LINE L1 5898 5988 -190 818 204 131 80 chr17 21706175 21706592 -63731888 + MLT2B1 LTR ERVL 1 414 0 535 139 243 7 chr17 21706593 21706737 -63731743 + L1MB7 LINE L1 5998 6175 -9 426 96 0 0 chr17 21707351 21707424 -63731056 + (CTG)n Simple_repeat Simple_repeat 3 75 0 840 174 0 0 chr17 21708219 21708351 -63730129 + FLAM_C SINE Alu 2 133 0 2288 105 3 0 chr17 21708429 21708725 -63729755 + AluSx SINE Alu 1 297 -15 1265 223 97 35 chr17 21710120 21710493 -63727987 + MSTD LTR MaLR 1 396 0 596 256 48 1 chr17 21710563 21710729 -63727751 - MIR SINE MIR -37 171 30 2067 135 0 0 chr17 21710818 21711132 -63727348 - AluSx SINE Alu 0 314 1 2119 113 61 0 chr17 21711184 21711477 -63727003 + AluSx SINE Alu 1 311 -1 2205 93 0 4 chr17 21712363 21712668 -63725812 - AluSc SINE Alu 0 304 1 2291 120 3 0 chr17 21713663 21713972 -63724508 + AluJb SINE Alu 1 310 -2 915 140 14 14 chr17 21714001 21714144 -63724336 + AluJo SINE Alu 1 143 -169 1468 94 0 0 chr17 21714147 21714328 -63724152 + AluSg SINE Alu 4 184 -126 238 97 0 0 chr17 21714329 21714360 -63724120 + AluSg SINE Alu 219 249 -52 1043 191 33 9 chr17 21714360 21714570 -63723910 + AluJo SINE Alu 85 299 -13 383 320 44 61 chr17 21714979 21715160 -63723320 - L1ME LINE L1 -521 5600 5423 2383 71 40 0 chr17 21715169 21715465 -63723015 + AluY SINE Alu 1 308 -3 609 190 61 25 chr17 21715531 21715694 -63722786 + MER96B DNA MER1_type? 1 169 -248 887 146 8 0 chr17 21715787 21715917 -63722563 - AluSq/x SINE Alu -181 131 1 1760 166 16 50 chr17 21716129 21716448 -63722032 + AluJo SINE Alu 1 308 -4 282 137 39 0 chr17 21716466 21716517 -63721963 - Alu SINE Alu -255 53 1 214 29 57 0 chr17 21716522 21716557 -63721923 + (TTTTC)n Simple_repeat Simple_repeat 3 39 0 2416 84 3 7 chr17 21716561 21716869 -63721611 - AluSq SINE Alu -1 312 6 8470 54 4 0 chr17 21716916 21717881 -63720599 - LTR5 LTR ERVK 0 969 1 928 169 19 6 chr17 21717961 21718121 -63720359 - FRAM SINE Alu -14 162 1 1910 150 7 0 chr17 21718166 21718460 -63720020 + AluSx SINE Alu 1 296 -16 2234 112 3 0 chr17 21718597 21718892 -63719588 + AluSx SINE Alu 1 296 -16 2204 84 0 39 chr17 21718892 21719200 -63719280 + AluSx SINE Alu 1 297 -15 23 33 0 0 chr17 21719315 21719345 -63719135 + GC_rich Low_complexity Low_complexity 1 30 0 245 207 0 103 chr17 21719454 21719570 -63718910 + C-rich Low_complexity Low_complexity 2 105 0 627 42 0 0 chr17 21720139 21720211 -63718269 + tRNA-Trp tRNA tRNA 1 72 -3 702 277 70 52 chr17 21720832 21721334 -63717146 + L1MEd LINE L1 505 1015 -5104 1673 135 82 7 chr17 21721413 21721695 -63716785 + AluJo SINE Alu 1 303 -9 1876 83 4 4 chr17 21721697 21721951 -63716529 + AluSp SINE Alu 50 303 -10 1207 155 103 94 chr17 21721951 21722078 -63716402 - MER4D LTR ERV1 -576 327 203 1840 100 86 10 chr17 21722078 21722369 -63716111 - AluSq SINE Alu 0 313 1 1207 155 103 94 chr17 21722369 21722545 -63715935 - MER4D LTR ERV1 -700 203 26 2333 60 17 0 chr17 21722545 21722845 -63715635 - AluY SINE Alu -6 305 1 1207 155 103 94 chr17 21722845 21722872 -63715608 - MER4D LTR ERV1 -877 26 1 258 287 40 20 chr17 21723409 21723510 -63714970 + L1ME4a LINE L1 5970 6072 -49 735 252 22 82 chr17 21723520 21723790 -63714690 + MIR SINE MIR 1 254 -8 4275 133 53 105 chr17 21723810 21723832 -63714648 + MER4D LTR ERV1 1 23 -880 1757 161 0 31 chr17 21723832 21724154 -63714326 + AluJo SINE Alu 1 312 0 4275 133 53 105 chr17 21724154 21724346 -63714134 + MER4D LTR ERV1 23 224 -679 2305 94 0 0 chr17 21724346 21724655 -63713825 + AluSq SINE Alu 1 309 -4 4275 133 53 105 chr17 21724655 21724795 -63713685 + MER4D LTR ERV1 224 370 -533 216 0 0 0 chr17 21724795 21724819 -63713661 + (TA)n Simple_repeat Simple_repeat 2 25 0 2239 116 0 0 chr17 21724819 21725129 -63713351 - AluSq SINE Alu -3 310 1 4275 133 53 105 chr17 21725129 21725721 -63712759 + MER4D LTR ERV1 368 900 -3 1612 158 79 93 chr17 21726119 21726690 -63711790 - Charlie2 DNA MER1_type -16 2846 2284 1959 103 3 28 chr17 21726865 21727156 -63711324 - AluSx SINE Alu -15 297 14 1704 129 47 4 chr17 21727569 21727847 -63710633 - AluSx SINE Alu -22 290 1 579 213 0 9 chr17 21727980 21728088 -63710392 + FLAM_C SINE Alu 2 108 -35 1311 202 18 3 chr17 21728109 21728391 -63710089 - AluJo SINE Alu -26 286 1 47 0 0 0 chr17 21728394 21728441 -63710039 + AT_rich Low_complexity Low_complexity 1 47 0 1345 167 49 24 chr17 21728441 21728728 -63709752 + AluJo SINE Alu 12 305 -7 2841 91 42 16 chr17 21779088 21779517 -63658963 - L1PB3 LINE L1 -2 6152 5713 24 0 0 0 chr17 21780062 21780086 -63658394 + AT_rich Low_complexity Low_complexity 1 24 0 38 0 0 0 chr17 21780679 21780717 -63657763 + AT_rich Low_complexity Low_complexity 1 38 0 733 150 65 39 chr17 21780724 21780877 -63657603 - FRAM SINE Alu -19 157 1 1749 110 4 0 chr17 21781116 21781362 -63657118 - AluSx SINE Alu -10 302 56 1740 161 17 3 chr17 21781575 21781867 -63656613 - AluSx SINE Alu -16 296 1 277 132 75 0 chr17 21783131 21783184 -63655296 + Alu SINE Alu 245 301 0 2071 86 0 35 chr17 21783755 21784068 -63654412 - AluSq SINE Alu -11 302 1 811 201 7 0 chr17 21784160 21784304 -63654176 + AluJo SINE Alu 4 148 -164 2249 32 0 76 chr17 21784406 21784721 -63653759 - AluY SINE Alu -20 291 1 1888 60 124 0 chr17 21784774 21785039 -63653441 - AluSq SINE Alu -10 303 6 1830 137 0 39 chr17 21785514 21785820 -63652660 - AluJb SINE Alu -12 300 7 183 129 0 0 chr17 21785902 21785933 -63652547 + (TC)n Simple_repeat Simple_repeat 1 31 0 229 222 0 0 chr17 21786041 21786095 -63652385 - L1MCa LINE L1 -3323 3103 3050 2004 117 50 0 chr17 21786103 21786401 -63652079 - AluSp SINE Alu 0 313 1 2215 97 3 0 chr17 21786449 21786747 -63651733 - AluSp SINE Alu -14 299 1 1250 259 100 20 chr17 21786747 21787061 -63651419 - L1MCa LINE L1 -3366 3060 2690 1591 126 42 27 chr17 21787061 21787323 -63651157 + AluJb SINE Alu 33 298 -14 1250 259 100 20 chr17 21787323 21787506 -63650974 - L1MCa LINE L1 -3736 2690 2523 266 0 29 0 chr17 21787510 21787544 -63650936 + (TTA)n Simple_repeat Simple_repeat 2 36 0 763 155 9 0 chr17 21787548 21787664 -63650816 - FLAM_C SINE Alu -25 118 2 1210 112 0 37 chr17 21787670 21787885 -63650595 - L1MCa LINE L1 -4175 2251 2045 1708 169 7 0 chr17 21788251 21788553 -63649927 + AluJb SINE Alu 1 304 -8 853 174 0 13 chr17 21788575 21788724 -63649756 + AluSq/x SINE Alu 1 147 -166 1795 119 18 3 chr17 21788830 21789115 -63649365 - AluSp SINE Alu -22 291 3 1318 163 203 49 chr17 21789603 21789676 -63648804 + Tigger7 DNA MER2_type 1 61 -2426 2424 57 0 3 chr17 21789676 21789977 -63648503 - AluY SINE Alu -9 302 3 1318 163 203 49 chr17 21789977 21790209 -63648271 + Tigger7 DNA MER2_type 61 353 -2134 2112 106 3 0 chr17 21790346 21790639 -63647841 + AluSp SINE Alu 3 296 -17 2106 122 3 0 chr17 21790648 21790951 -63647529 + AluSx SINE Alu 1 304 -8 1068 92 0 13 chr17 21790959 21791112 -63647368 + AluJb SINE Alu 1 151 -161 714 115 0 0 chr17 21792577 21792673 -63645807 - AluSg SINE Alu -213 97 2 2223 175 27 23 chr17 21792674 21792924 -63645556 - L1MB5 LINE L1 -314 5860 5606 2285 72 0 3 chr17 21792924 21793217 -63645263 - AluY SINE Alu 0 311 20 2223 175 27 23 chr17 21793217 21793440 -63645040 - L1MB5 LINE L1 -568 5606 5385 1270 212 86 3 chr17 21793440 21793878 -63644602 + L1MC/D LINE L1 1851 2381 -4045 2486 61 0 0 chr17 21793878 21794188 -63644292 + AluY SINE Alu 1 310 -1 1270 212 86 3 chr17 21794188 21794237 -63644243 + L1MC/D LINE L1 2381 2424 -4002 5031 225 68 45 chr17 21794257 21795284 -63643196 + L1MB4 LINE L1 3951 4953 -1227 1636 170 50 0 chr17 21795284 21795408 -63643072 + AluJb SINE Alu 3 119 -193 405 0 0 0 chr17 21795408 21795453 -63643027 + (CA)n Simple_repeat Simple_repeat 2 46 0 1636 170 50 0 chr17 21795453 21795610 -63642870 + AluJb SINE Alu 119 298 -14 5031 225 68 45 chr17 21795610 21795921 -63642559 + L1MB4 LINE L1 4953 5255 -925 2285 96 0 0 chr17 21795921 21796223 -63642257 + AluSx SINE Alu 1 302 -10 5031 225 68 45 chr17 21796223 21796719 -63641761 + L1MB4 LINE L1 5255 5860 -320 1694 164 0 14 chr17 21796719 21797005 -63641475 + AluJb SINE Alu 12 293 -19 5031 225 68 45 chr17 21797005 21797332 -63641148 + L1MB4 LINE L1 5860 6178 -2 2582 7 3 3 chr17 21797332 21797626 -63640854 + AluYb8 SINE Alu 19 312 -6 4153 212 64 13 chr17 21797661 21799261 -63639219 + L1MC/D LINE L1 4285 5957 -667 1351 117 33 58 chr17 21799295 21799554 -63638926 - L1MB4 LINE L1 -34 6146 5892 416 213 21 0 chr17 21800055 21800149 -63638331 + L1M4 LINE L1 5357 5452 -726 1355 201 33 27 chr17 21800149 21800448 -63638032 + AluSx SINE Alu 1 301 -11 1207 114 0 0 chr17 21800581 21800748 -63637732 + AluSq SINE Alu 132 298 -15 2205 75 0 0 chr17 21801069 21801381 -63637099 - AluY SINE Alu 0 312 1 2112 84 0 11 chr17 21802715 21803036 -63635444 + AluY SINE Alu 1 318 0 2364 49 10 33 chr17 21803654 21803960 -63634520 + AluY SINE Alu 1 299 -12 1333 93 0 0 chr17 21804531 21804713 -63633767 - AluY SINE Alu -11 300 119 815 187 13 7 chr17 21804827 21804982 -63633498 + Tigger7 DNA MER2_type 2326 2481 -10 2141 93 10 0 chr17 21805128 21805417 -63633063 - AluSx SINE Alu -20 292 1 22 0 0 0 chr17 21806937 21806959 -63631521 + AT_rich Low_complexity Low_complexity 1 22 0 23 54 0 0 chr17 21807087 21807124 -63631356 + AT_rich Low_complexity Low_complexity 1 37 0 396 108 0 0 chr17 21807227 21807292 -63631188 - L1MA7 LINE L1 -4 6287 6223 1685 99 11 75 chr17 21807404 21807868 -63630612 - SVA Other Other -520 866 433 5247 62 36 54 chr17 21807881 21808847 -63629633 - SVA Other Other -518 868 57 618 26 0 0 chr17 21808847 21808923 -63629557 + (GGGAGA)n Simple_repeat Simple_repeat 1 76 0 706 309 86 52 chr17 21808923 21809305 -63629175 - L1M4 LINE L1 -2377 3769 3375 392 286 195 43 chr17 21809977 21810393 -63628087 + L2 LINE L2 2825 3303 -10 741 151 0 17 chr17 21810976 21811095 -63627385 + FLAM_C SINE Alu 1 117 -16 1745 102 0 51 chr17 21811341 21811616 -63626864 - AluSg SINE Alu -8 302 42 317 234 191 14 chr17 21811973 21812114 -63626366 + MIR3 SINE MIR 33 198 -10 360 217 217 0 chr17 21812129 21812267 -63626213 + MER5A DNA MER1_type 4 171 -18 435 341 58 5 chr17 21812597 21812802 -63625678 + MIR SINE MIR 32 247 -15 458 148 20 40 chr17 21813181 21813205 -63625275 - AluS SINE Alu -213 100 77 225 0 0 0 chr17 21813215 21813240 -63625240 + (ATTG)n Simple_repeat Simple_repeat 4 28 0 1639 86 5 0 chr17 21813240 21813451 -63625029 - AluSp SINE Alu -29 284 70 1360 161 119 75 chr17 21813455 21813884 -63624596 - LTR7 LTR ERV1 -2 448 1 458 148 20 40 chr17 21813884 21813955 -63624525 - AluS SINE Alu -239 74 2 1425 151 0 4 chr17 21813960 21814192 -63624288 - AluJb SINE Alu -16 296 66 4046 172 23 63 chr17 21814551 21815551 -63622929 + LTR5 LTR ERVK 1 960 -9 1399 183 5 46 chr17 21815882 21816249 -63622231 - L1M4 LINE L1 -2929 3217 2866 404 57 19 0 chr17 21816249 21816302 -63622178 + Alu SINE Alu 1 54 -246 232 248 0 48 chr17 21817071 21817196 -63621284 + C-rich Low_complexity Low_complexity 5 123 0 1954 104 3 3 chr17 21817612 21817901 -63620579 + AluJo SINE Alu 3 291 -21 2204 95 0 13 chr17 21817908 21818224 -63620256 + AluSx SINE Alu 1 312 0 1535 127 0 28 chr17 21820312 21820564 -63617916 - AluSg/x SINE Alu 0 312 68 990 136 0 7 chr17 21820759 21820921 -63617559 + AluSg/x SINE Alu 142 295 -15 1188 247 116 65 chr17 21820941 21821955 -63616525 - HAL1 LINE L1 -637 1870 818 2225 110 3 22 chr17 21822702 21823020 -63615460 - AluSx SINE Alu 0 312 1 249 197 82 49 chr17 21823476 21823537 -63614943 - MIR SINE MIR -25 237 175 289 333 78 0 chr17 21823756 21823846 -63614634 - MIR3 SINE MIR -102 106 10 1708 95 0 5 chr17 21824257 21824467 -63614013 - AluSx SINE Alu -103 209 1 342 200 0 0 chr17 21824574 21824639 -63613841 + L1MEc LINE L1 265 329 -6278 309 182 78 26 chr17 21824669 21824746 -63613734 + L1MC4 LINE L1 1992 2072 -4354 344 194 80 20 chr17 21824774 21824883 -63613597 + L1MC4 LINE L1 1983 6983 -1339 339 242 40 40 chr17 21824804 21824903 -63613577 - L1MC4 LINE L1 -1340 6702 6604 * 1328 171 63 0 chr17 21824927 21825149 -63613331 + AluJo SINE Alu 60 295 -17 3398 247 67 25 chr17 21825149 21825385 -63613095 + L1MEc LINE L1 340 565 -6042 2352 101 3 0 chr17 21825385 21825681 -63612799 + AluSx SINE Alu 1 297 -15 3398 247 67 25 chr17 21825681 21826621 -63611859 + L1MEc LINE L1 565 1566 -5041 701 315 250 18 chr17 21826635 21827343 -63611137 - L3 LINE CR1 -42 1535 664 739 313 156 30 chr17 21827344 21828041 -63610439 + L2 LINE L2 606 1390 -1924 5924 200 53 52 chr17 21828041 21828538 -63609942 - L1M4 LINE L1 -4870 1672 1177 1800 137 10 83 chr17 21828538 21828852 -63609628 + AluJo SINE Alu 1 291 -21 5924 200 53 52 chr17 21828852 21829272 -63609208 - L1M4 LINE L1 -5365 1177 759 2312 109 0 3 chr17 21829272 21829576 -63608904 - AluSx SINE Alu -9 303 1 5924 200 53 52 chr17 21829576 21830220 -63608260 - L1M4 LINE L1 -5783 759 105 1751 171 0 33 chr17 21830220 21830519 -63607961 - AluJo SINE Alu -23 289 1 5924 200 53 52 chr17 21830519 21830562 -63607918 - L1M4 LINE L1 -6437 105 64 643 232 39 24 chr17 21830536 21830743 -63607737 - L1M4 LINE L1 -5407 1135 926 * 236 186 0 0 chr17 21830754 21830797 -63607683 - L1M4 LINE L1 -5684 596 554 369 291 110 50 chr17 21830854 21831191 -63607289 - L1M4 LINE L1 -5987 397 41 239 267 79 40 chr17 21831982 21832083 -63606397 - L3 LINE CR1 -393 1184 1080 241 308 132 0 chr17 21832753 21832844 -63605636 - L2 LINE L2 -2 3270 3168 2407 93 0 10 chr17 21833081 21833393 -63605087 + AluSg SINE Alu 1 309 -1 1884 137 10 7 chr17 21833521 21833813 -63604667 + AluJb SINE Alu 3 295 -17 233 200 0 0 chr17 21833941 21833986 -63604494 + Alu SINE Alu 87 131 -171 242 289 0 44 chr17 21833988 21834078 -63604402 - MLT1L LTR MaLR -387 228 143 2333 99 17 0 chr17 21834149 21834451 -63604029 + AluSg SINE Alu 1 307 -3 2266 108 17 0 chr17 21834460 21834756 -63603724 + AluSx SINE Alu 1 301 -11 2402 77 0 32 chr17 21834766 21835077 -63603403 + AluSx SINE Alu 1 301 -11 1942 184 105 5 chr17 21835293 21835732 -63602748 + MLT1D LTR MaLR 9 491 -14 25 31 0 0 chr17 21835826 21835858 -63602622 + AT_rich Low_complexity Low_complexity 1 32 0 946 128 0 7 chr17 21835969 21836110 -63602370 + FLAM_C SINE Alu 1 140 -3 261 295 46 17 chr17 21836110 21836283 -63602197 + L1M4 LINE L1 3734 3911 -2235 22 0 0 0 chr17 21836283 21836305 -63602175 + AT_rich Low_complexity Low_complexity 1 22 0 1808 146 0 67 chr17 21836305 21836440 -63602040 + AluJb SINE Alu 5 147 -165 2162 109 26 26 chr17 21836440 21836752 -63601728 + AluSp SINE Alu 1 312 -1 1808 146 0 67 chr17 21836752 21836932 -63601548 + AluJb SINE Alu 147 299 -13 212 182 23 0 chr17 21837043 21837087 -63601393 + L2 LINE L2 1274 1318 -1996 934 193 0 0 chr17 21837219 21837385 -63601095 - FRAM SINE Alu 0 40 1 403 173 0 0 chr17 21837602 21837673 -63600807 - L1MC3 LINE L1 -589 7406 7121 516 316 61 58 chr17 21837688 21837861 -63600619 - L1M4 LINE L1 -1736 4410 4234 934 118 0 8 chr17 21837861 21837988 -63600492 - FLAM_C SINE Alu -7 126 1 516 316 61 58 chr17 21837988 21838140 -63600340 - L1M4 LINE L1 -1912 4234 4084 2303 68 34 0 chr17 21838599 21838895 -63599585 - AluSc SINE Alu -3 306 1 190 239 22 0 chr17 21839150 21839196 -63599284 - MIR SINE MIR -68 140 94 34 55 0 0 chr17 21839731 21839786 -63598694 + GC_rich Low_complexity Low_complexity 1 55 0 2302 118 0 0 chr17 21841116 21841420 -63597060 + AluSx SINE Alu 1 304 -8 2052 66 0 52 chr17 21841428 21841699 -63596781 + AluSc SINE Alu 1 257 -52 290 216 26 121 chr17 21841781 21841897 -63596583 + MIR SINE MIR 79 183 -79 1450 136 148 4 chr17 21841912 21842189 -63596291 - AluJo SINE Alu 0 313 1 347 60 20 0 chr17 21842200 21842250 -63596230 + (TAA)n Simple_repeat Simple_repeat 1 51 0 200 252 16 130 chr17 21843817 21843940 -63594540 + L2 LINE L2 2951 3059 -213 262 119 269 15 chr17 21844018 21844085 -63594395 - Tigger5 DNA MER2_type 0 2323 2240 1666 244 47 2 chr17 21844092 21844494 -63593986 - Tigger5 DNA MER2_type -1884 439 20 251 284 23 11 chr17 21844627 21844715 -63593765 + MIR3 SINE MIR 93 181 -27 1434 149 112 22 chr17 21844909 21845178 -63593302 - AluJo SINE Alu -19 293 1 2257 102 0 7 chr17 21845460 21845754 -63592726 - AluSx SINE Alu -20 292 1 273 29 0 0 chr17 21846813 21846847 -63591633 + (CA)n Simple_repeat Simple_repeat 2 35 0 2421 88 0 0 chr17 21847814 21848108 -63590372 + AluSg SINE Alu 1 294 -16 624 202 16 0 chr17 21848502 21848631 -63589849 - MLT1D LTR MaLR 0 505 375 362 236 22 0 chr17 21848641 21848730 -63589750 - MLT1D LTR MaLR -414 91 1 2168 120 0 0 chr17 21848738 21849060 -63589420 - AluSx SINE Alu 0 322 1 2443 97 0 0 chr17 21849070 21849378 -63589102 - AluSx SINE Alu -4 308 1 2046 124 37 3 chr17 21849913 21850211 -63588269 - AluSg SINE Alu -1 309 2 1918 148 42 42 chr17 21850843 21851169 -63587311 - LTR26B LTR ERV1 0 531 206 2333 92 3 0 chr17 21851169 21851461 -63587019 - AluSg SINE Alu -17 293 1 1854 174 7 3 chr17 21851466 21851759 -63586721 - AluJb SINE Alu -18 294 1 1918 148 42 42 chr17 21851759 21851804 -63586676 - LTR26B LTR ERV1 -328 203 154 432 196 57 48 chr17 21851906 21852051 -63586429 - L1 LINE L1 -873 5273 5111 2894 3 0 0 chr17 21852100 21852404 -63586076 + AluY SINE Alu 1 304 -7 183 281 203 47 chr17 21853097 21853225 -63585255 - MIR3 SINE MIR -60 148 1 2234 135 0 0 chr17 21853241 21853553 -63584927 - AluSx SINE Alu 0 312 1 2003 137 0 26 chr17 21853858 21854165 -63584315 - AluJb SINE Alu -13 299 1 653 312 64 9 chr17 21854634 21854852 -63583628 + MIR SINE MIR 3 232 -30 446 317 49 31 chr17 21854910 21855021 -63583459 - L2 LINE L2 -96 3217 3109 2242 116 7 0 chr17 21855021 21855323 -63583157 + AluSq SINE Alu 1 304 -9 446 317 49 31 chr17 21855323 21855435 -63583045 - L2 LINE L2 -204 3109 2990 366 313 92 36 chr17 21855587 21855836 -63582644 - L2 LINE L2 -621 2693 2431 208 50 0 50 chr17 21855899 21855939 -63582541 + (TTTTG)n Simple_repeat Simple_repeat 2 39 0 423 0 0 0 chr17 21855993 21856040 -63582440 + (CA)n Simple_repeat Simple_repeat 2 48 0 385 164 14 14 chr17 21858775 21858848 -63579632 - MER5A DNA MER1_type -2 187 115 485 261 30 42 chr17 21858848 21859013 -63579467 + MER63 DNA MER1_type 1 789 -273 1813 168 28 0 chr17 21859041 21859327 -63579153 - AluJo SINE Alu -18 294 1 706 96 0 0 chr17 21859331 21859425 -63579055 - AluY SINE Alu -11 300 207 229 273 124 50 chr17 21859518 21859639 -63578841 - MER5B DNA MER1_type -45 133 4 1359 102 0 0 chr17 21859698 21859874 -63578606 - AluSg/x SINE Alu -3 309 134 704 198 11 39 chr17 21860396 21860478 -63578002 - MER5B DNA MER1_type -1 177 94 1989 121 48 3 chr17 21860478 21860768 -63577712 - AluSx SINE Alu -9 303 1 704 198 11 39 chr17 21860768 21860867 -63577613 - MER5B DNA MER1_type -84 94 1 704 175 129 29 chr17 21860919 21861090 -63577390 + MER20 DNA MER1_type 32 219 0 2079 126 10 0 chr17 21861182 21861475 -63577005 - AluSg SINE Alu -14 296 1 1287 163 10 0 chr17 21862093 21862302 -63576178 - AluJo SINE Alu -2 310 100 1805 184 3 0 chr17 21862303 21862596 -63575884 - AluJb SINE Alu -18 294 1 1497 169 111 14 chr17 21862635 21862985 -63575495 - MLT1B LTR MaLR 0 390 7 840 142 0 24 chr17 21864197 21864324 -63574156 - AluJo SINE Alu -188 124 1 188 253 93 13 chr17 21864674 21864749 -63573731 - L2 LINE L2 -3036 278 198 2433 92 13 0 chr17 21865515 21865820 -63572660 - AluSx SINE Alu -3 309 1 2380 227 61 37 chr17 21865991 21866642 -63571838 - LTR65 LTR ERV1 0 669 3 743 196 98 5 chr17 21868488 21868538 -63569942 + L1MB2 LINE L1 5632 5676 -495 2356 94 7 0 chr17 21868538 21868837 -63569643 - AluSq SINE Alu -12 301 1 743 196 98 5 chr17 21868837 21868970 -63569510 + L1MB2 LINE L1 5676 5832 -339 244 259 72 50 chr17 21869278 21869540 -63568940 - L1ME LINE L1 -222 5899 5632 208 220 100 80 chr17 21869586 21869686 -63568794 + MIR SINE MIR 82 183 -79 1655 168 13 69 chr17 21870158 21870432 -63568048 - L1MC4 LINE L1 -407 7635 7386 1597 176 79 3 chr17 21870432 21870722 -63567758 - AluJo SINE Alu 0 312 1 1655 168 13 69 chr17 21870722 21870823 -63567657 - L1MC4 LINE L1 -656 7386 7281 984 249 40 20 chr17 21871022 21871271 -63567209 - MIR SINE MIR 0 262 9 1030 141 0 76 chr17 21871354 21871502 -63566978 + FRAM SINE Alu 1 134 -178 2346 107 0 3 chr17 21871502 21871811 -63566669 - AluSx SINE Alu -4 308 1 1030 141 0 76 chr17 21871811 21871846 -63566634 + FRAM SINE Alu 134 170 -6 478 131 24 12 chr17 21872522 21872606 -63565874 + LTR65 LTR ERV1 164 248 -421 2008 96 57 0 chr17 21872606 21872886 -63565594 + AluSx SINE Alu 16 311 -1 2027 110 0 17 chr17 21872953 21873254 -63565226 + AluSx SINE Alu 1 296 -16 2500 53 0 0 chr17 21873340 21873641 -63564839 + AluY SINE Alu 1 301 -10 2026 120 3 10 chr17 21874259 21874558 -63563922 + AluSx SINE Alu 1 297 -15 1651 137 18 0 chr17 21874766 21875043 -63563437 + AluSx SINE Alu 11 292 -20 214 224 30 45 chr17 21875301 21875368 -63563112 + MER5A DNA MER1_type 38 103 -86 826 213 6 0 chr17 21875628 21875797 -63562683 + FRAM SINE Alu 1 170 -6 2461 201 40 6 chr17 21875921 21876452 -63562028 - MER89 LTR ERV1 0 559 11 902 127 35 0 chr17 21877680 21877822 -63560658 + FRAM SINE Alu 11 157 -19 190 218 73 18 chr17 21878064 21878119 -63560361 + MIR SINE MIR 121 178 -84 1850 100 18 36 chr17 21878123 21878404 -63560076 - AluSx SINE Alu -36 276 1 198 0 0 0 chr17 21878529 21878551 -63559929 + (TCCC)n Simple_repeat Simple_repeat 4 25 0 804 190 0 0 chr17 21878566 21878703 -63559777 - AluJb SINE Alu -39 273 137 346 248 26 59 chr17 21878706 21878859 -63559621 - HAL1 LINE L1 -932 1575 1428 1846 171 0 3 chr17 21878870 21879169 -63559311 - AluJo SINE Alu -14 298 1 867 220 63 29 chr17 21879236 21879587 -63558893 - LTR48B LTR ERV1 0 644 259 225 244 0 128 chr17 21879646 21879732 -63558748 - LTR48 LTR ERV1 -702 85 11 1798 154 20 3 chr17 21879809 21880114 -63558366 - AluJo SINE Alu 0 312 3 2107 101 3 26 chr17 21880209 21880517 -63557963 - AluSp SINE Alu -12 301 1 946 153 0 23 chr17 21881443 21881620 -63556860 - FRAM SINE Alu -4 172 1 1218 153 51 5 chr17 21881751 21881967 -63556513 - AluJo SINE Alu -86 226 1 964 78 8 0 chr17 21882186 21882314 -63556166 + AluSq SINE Alu 101 229 -84 276 79 0 0 chr17 21882905 21882943 -63555537 - L1MA5A LINE L1 -116 6181 6144 1310 141 0 75 chr17 21882943 21883123 -63555357 - AluJo SINE Alu -3 309 150 2089 99 39 0 chr17 21883123 21883406 -63555074 - AluSx SINE Alu -18 294 1 1310 141 0 75 chr17 21883406 21883466 -63555014 - AluJo SINE Alu -162 150 87 720 191 34 0 chr17 21883472 21883619 -63554861 - L1MA5A LINE L1 -155 6142 5991 1932 137 7 0 chr17 21883630 21883922 -63554558 - AluSx SINE Alu -18 294 1 432 278 247 0 chr17 21884401 21884595 -63553885 + MIR SINE MIR 21 262 0 2103 119 3 0 chr17 21884660 21884962 -63553518 - AluSx SINE Alu -9 303 1 1704 168 47 26 chr17 21885448 21885787 -63552693 + MER47A DNA MER2_type 20 365 -1 645 152 0 0 chr17 21885803 21885908 -63552572 - FLAM_A SINE Alu -17 125 21 2134 108 0 9 chr17 21885957 21886272 -63552208 + AluSx SINE Alu 1 312 0 2236 80 0 7 chr17 21887367 21887700 -63550780 + AluSq SINE Alu 1 331 0 902 155 0 19 chr17 21888216 21888371 -63550109 + FRAM SINE Alu 1 152 -24 26 0 0 0 chr17 21888372 21888398 -63550082 + AT_rich Low_complexity Low_complexity 1 26 0 2373 72 0 0 chr17 21888737 21889041 -63549439 + AluY SINE Alu 1 304 -7 193 304 58 14 chr17 21890557 21890626 -63547854 - L2 LINE L2 -8 3264 3193 683 143 10 38 chr17 21891517 21891665 -63546815 - L1M LINE L1 -758 5420 5274 2157 87 0 7 chr17 21891666 21891976 -63546504 - AluSx SINE Alu 0 308 1 600 246 73 45 chr17 21892488 21892708 -63545772 + MIR SINE MIR 14 239 -23 1970 78 67 7 chr17 21893087 21893369 -63545111 + AluSc SINE Alu 1 299 -10 469 231 169 46 chr17 21893480 21893769 -63544711 + L1ME4a LINE L1 5165 5489 -770 397 290 70 65 chr17 21893803 21894017 -63544463 + L1ME4a LINE L1 5679 5893 -228 2468 40 0 0 chr17 21894262 21894558 -63543922 + AluY SINE Alu 1 296 -15 2257 52 0 17 chr17 21894651 21894967 -63543513 + AluY SINE Alu 1 311 0 23 0 0 0 chr17 21895173 21895196 -63543284 + AT_rich Low_complexity Low_complexity 1 23 0 283 292 109 7 chr17 21895301 21895438 -63543042 - L1MEc LINE L1 -4722 1674 1524 2309 197 71 27 chr17 21895442 21895716 -63542764 - L1M4 LINE L1 -1424 4722 4462 2051 80 0 0 chr17 21895716 21896010 -63542470 - AluY SINE Alu 0 311 36 2309 197 71 27 chr17 21896010 21896325 -63542155 - L1M4 LINE L1 -1684 4462 4107 482 92 0 0 chr17 21896446 21896511 -63541969 + AluSq SINE Alu 2 66 -247 270 139 0 0 chr17 21896638 21896681 -63541799 + MIR SINE MIR 211 253 -9 203 354 0 0 chr17 21897101 21897183 -63541297 + C-rich Low_complexity Low_complexity 6 87 0 191 138 0 0 chr17 21897473 21897502 -63540978 + MIR SINE MIR 224 252 -10 593 154 0 77 chr17 21899477 21899672 -63538808 + CT-rich Low_complexity Low_complexity 1 180 0 282 262 213 25 chr17 21901115 21901237 -63537243 + MIR SINE MIR 62 206 -56 22 0 0 0 chr17 21901237 21901259 -63537221 + AT_rich Low_complexity Low_complexity 1 22 0 1747 128 0 4 chr17 21902005 21902278 -63536202 + AluSq SINE Alu 42 313 0 5251 205 25 3 chr17 21902278 21903478 -63535002 + L1PB3 LINE L1 4163 5388 -758 2713 158 12 79 chr17 21903483 21903657 -63534823 + L1PB3 LINE L1 5611 5795 -359 2015 101 4 4 chr17 21903657 21903935 -63534545 + AluSg SINE Alu 1 278 -32 2713 158 12 79 chr17 21903935 21904341 -63534139 + L1PB3 LINE L1 5795 6152 -2 1121 102 0 0 chr17 21904351 21904498 -63533982 + AluSq/x SINE Alu 1 147 -166 228 307 209 42 chr17 21904755 21905061 -63533419 + L3 LINE CR1 243 599 -978 673 195 0 0 chr17 21905062 21905185 -63533295 + FLAM_A SINE Alu 4 126 -7 190 340 75 11 chr17 21905300 21905394 -63533086 + L3 LINE CR1 794 893 -684 201 356 0 0 chr17 21906063 21906122 -63532358 - L2 LINE L2 -9 3304 3246 203 203 47 16 chr17 21906211 21906275 -63532205 - L2 LINE L2 -1018 2296 2231 596 232 158 20 chr17 21906763 21907017 -63531463 + L2 LINE L2 3025 3313 0 1637 98 62 4 chr17 21907654 21907898 -63530582 + AluSp SINE Alu 52 309 -4 26 30 0 0 chr17 21907923 21907956 -63530524 + AT_rich Low_complexity Low_complexity 1 33 0 789 172 0 0 chr17 21908072 21908194 -63530286 + FLAM_C SINE Alu 2 123 -20 186 43 0 0 chr17 21908195 21908218 -63530262 + (TTAA)n Simple_repeat Simple_repeat 1 23 0 321 200 24 47 chr17 21908222 21908307 -63530173 - MLT1H1 LTR MaLR -77 478 396 704 278 163 10 chr17 21908495 21908790 -63529690 - L1ME3A LINE L1 -274 5896 5557 1183 167 21 103 chr17 21908797 21908961 -63529519 - AluSq SINE Alu 0 303 178 2009 125 0 3 chr17 21908961 21909264 -63529216 - AluSc SINE Alu -7 302 1 1183 167 21 103 chr17 21909264 21909429 -63529051 - AluSq SINE Alu -125 178 1 236 285 0 73 chr17 21909487 21909624 -63528856 + L1MEc LINE L1 1731 1857 -4539 12928 146 109 16 chr17 21909637 21911938 -63526542 + L1M4 LINE L1 21 2537 -5028 4773 161 51 30 chr17 21911924 21912112 -63526368 + L1M4 LINE L1 3133 3316 -4249 * 2104 115 0 0 chr17 21912112 21912408 -63526072 + AluSq SINE Alu 1 296 -17 4773 161 51 30 chr17 21912408 21913247 -63525233 + L1M4 LINE L1 3316 4217 -3348 1598 143 46 55 chr17 21913247 21913384 -63525096 + AluSx SINE Alu 3 140 -172 1980 137 0 0 chr17 21913384 21913677 -63524803 + AluSx SINE Alu 5 297 -15 1598 143 46 55 chr17 21913677 21913846 -63524634 + AluSx SINE Alu 140 306 -6 4773 161 51 30 chr17 21913846 21914337 -63524143 + L1M4 LINE L1 4217 4696 -2869 966 179 62 12 chr17 21914337 21914567 -63523913 + MSTD LTR MaLR 114 396 0 668 101 0 0 chr17 21914630 21914729 -63523751 + AluY SINE Alu 213 311 0 1457 223 32 52 chr17 21914748 21914963 -63523517 + L1M4 LINE L1 6042 6245 -1320 2274 115 27 27 chr17 21914963 21915338 -63523142 - THE1C LTR MaLR 0 375 1 1457 223 32 52 chr17 21915338 21915562 -63522918 + L1M4 LINE L1 6245 6472 -1093 3111 154 53 68 chr17 21915568 21916219 -63522261 + L1MCb LINE L1 724 1374 -5190 320 79 0 0 chr17 21916219 21916257 -63522223 + tRNA-Lys-AAG tRNA tRNA 1 38 -38 3111 154 53 68 chr17 21916257 21916607 -63521873 + L1MCb LINE L1 1374 1728 -4836 258 282 53 92 chr17 21916730 21916801 -63521679 - MER5A DNA MER1_type -1 188 123 2000 79 0 11 chr17 21916801 21917068 -63521412 + AluY SINE Alu 30 293 -18 258 282 53 92 chr17 21917068 21917127 -63521353 - MER5A DNA MER1_type -66 123 63 225 0 0 0 chr17 21917325 21917350 -63521130 + (A)n Simple_repeat Simple_repeat 1 25 0 524 185 0 0 chr17 21917460 21917552 -63520928 + MLT1D LTR MaLR 414 505 0 2042 150 211 19 chr17 21918357 21918784 -63519696 + LTR22 LTR ERVK 1 509 0 365 246 236 49 chr17 21918785 21918988 -63519492 + MIR SINE MIR 22 262 0 1988 142 0 10 chr17 21918990 21919292 -63519188 + AluSx SINE Alu 3 301 -11 23 33 0 0 chr17 21920786 21920816 -63517664 + AT_rich Low_complexity Low_complexity 1 30 0 2252 98 0 0 chr17 21920857 21921154 -63517326 + AluSg SINE Alu 1 297 -13 1308 276 58 15 chr17 21921878 21922288 -63516192 + LTR16B LTR ERVL 37 464 0 1860 152 3 37 chr17 21923268 21923591 -63514889 + AluJb SINE Alu 1 312 0 307 305 131 34 chr17 21924001 21924237 -63514243 - L1MC4a LINE L1 -1649 6159 5901 4792 187 122 19 chr17 21924244 21925556 -63512924 - Charlie1 DNA MER1_type -6 2755 1 422 329 61 26 chr17 21925560 21925788 -63512692 - L1MC4a LINE L1 -1905 5903 5668 954 104 0 15 chr17 21926077 21926212 -63512268 + FLAM_C SINE Alu 1 133 0 311 284 57 11 chr17 21926235 21926323 -63512157 - HAL1 LINE L1 -2379 128 37 253 169 28 28 chr17 21926411 21926482 -63511998 + (TA)n Simple_repeat Simple_repeat 1 71 0 447 270 45 34 chr17 21927495 21927673 -63510807 + MLT1J LTR MaLR 1 180 -331 312 244 35 23 chr17 21929752 21929838 -63508642 + MER119 DNA MER1_type 1 87 -496 1999 86 8 4 chr17 21929838 21930093 -63508387 + AluSq SINE Alu 38 293 -20 5171 174 18 11 chr17 21930103 21931422 -63507058 + L1MB2 LINE L1 4839 6168 -3 2362 95 3 3 chr17 21931427 21931732 -63506748 + AluSx SINE Alu 1 305 -7 1141 131 0 0 chr17 21931732 21931892 -63506588 + AluSg/x SINE Alu 134 293 -19 2385 98 3 0 chr17 21931926 21932233 -63506247 + AluY SINE Alu 1 308 -3 24 67 0 0 chr17 21932304 21932349 -63506131 + AT_rich Low_complexity Low_complexity 1 45 0 814 142 8 0 chr17 21932949 21933076 -63505404 + FLAM_C SINE Alu 1 128 -5 204 301 0 32 chr17 21933077 21933170 -63505310 - L2 LINE L2 -159 3154 3065 319 303 122 52 chr17 21933199 21933409 -63505071 + L1MC4a LINE L1 6051 6288 -1520 2366 107 0 7 chr17 21933409 21933718 -63504762 - AluSx SINE Alu -5 307 1 319 303 122 52 chr17 21933718 21933794 -63504686 + L1MC4a LINE L1 6288 6357 -1451 1114 233 52 0 chr17 21933932 21934202 -63504278 + HAL1 LINE L1 92 375 -2132 266 317 49 7 chr17 21934200 21934342 -63504138 + L1MA9 LINE L1 6083 6230 -82 * 1974 196 18 25 chr17 21934342 21934735 -63503745 - MER47B DNA MER2_type -1 417 28 1069 263 93 55 chr17 21934811 21935263 -63503217 + HAL1 LINE L1 352 820 -1687 308 174 210 18 chr17 21935279 21935446 -63503034 + HAL1 LINE L1 995 1193 -1314 410 204 124 9 chr17 21935555 21935668 -63502812 - L2 LINE L2 -1315 1999 1874 510 257 65 36 chr17 21935671 21935978 -63502502 + L1M4 LINE L1 4382 4697 -1449 294 29 0 0 chr17 21936381 21936416 -63502064 + (TA)n Simple_repeat Simple_repeat 1 35 0 1355 169 135 4 chr17 21936421 21936687 -63501793 - AluJo SINE Alu 0 302 2 694 215 0 8 chr17 21936692 21936822 -63501658 - FLAM_C SINE Alu -3 130 2 827 193 93 0 chr17 21936931 21937092 -63501388 - MER46A DNA MER2_type -60 176 1 2262 82 3 70 chr17 21937225 21937556 -63500924 - AluSg SINE Alu 0 310 2 813 36 18 27 chr17 21937733 21937845 -63500635 + L1PA4 LINE L1 6045 6155 0 180 273 18 0 chr17 21939934 21939989 -63498491 - MIR SINE MIR -3 259 204 243 69 0 0 chr17 21940008 21940037 -63498443 + AluY SINE Alu 14 42 -261 2397 54 0 4 chr17 21940037 21940316 -63498164 + AluY SINE Alu 21 298 -13 210 308 0 0 chr17 21940370 21940422 -63498058 - MIR SINE MIR -157 105 54 383 319 97 59 chr17 21940459 21940767 -63497713 + L2 LINE L2 1428 1723 -1591 2342 95 0 0 chr17 21940767 21941062 -63497418 - AluSg SINE Alu -2 308 14 383 319 97 59 chr17 21941062 21941665 -63496815 + L2 LINE L2 1723 2373 -941 2535 70 0 0 chr17 21942022 21942323 -63496157 - AluSc SINE Alu -8 301 1 809 211 0 0 chr17 21942479 21942635 -63495845 + MER3 DNA MER1_type 19 127 -82 2308 93 0 0 chr17 21943001 21943290 -63495190 + AluSx SINE Alu 1 289 -23 558 116 35 0 chr17 21943732 21943818 -63494662 - AluJ SINE Alu -25 287 199 1053 132 0 0 chr17 21943818 21943962 -63494518 - AluJ SINE Alu -168 144 1 1921 145 35 0 chr17 21943971 21944261 -63494219 - AluSx SINE Alu -12 300 1 2064 142 0 19 chr17 21944328 21944644 -63493836 - AluSx SINE Alu -2 310 1 2213 123 0 0 chr17 21944653 21944962 -63493518 - AluY SINE Alu -2 309 1 248 118 0 39 chr17 21944966 21945017 -63493463 - Alu SINE Alu 0 133 85 807 204 0 39 chr17 21945017 21945198 -63493282 - AluJo SINE Alu -92 220 47 190 204 23 0 chr17 21945550 21945594 -63492886 - MIR SINE MIR 0 262 218 208 228 148 40 chr17 21945927 21946028 -63492452 - MIR SINE MIR -27 235 124 2078 101 50 7 chr17 21946154 21946451 -63492029 + AluSx SINE Alu 1 310 -2 195 302 75 19 chr17 21946835 21946941 -63491539 - MIR SINE MIR -77 131 20 1979 116 58 0 chr17 21947404 21947679 -63490801 + AluSx SINE Alu 1 291 -21 2328 77 3 0 chr17 21947681 21948002 -63490478 + AluSp SINE Alu 1 322 0 35 63 0 0 chr17 21948330 21948393 -63490087 + AT_rich Low_complexity Low_complexity 1 63 0 2546 53 0 7 chr17 21948650 21948952 -63489528 + AluY SINE Alu 1 300 -11 234 331 96 22 chr17 21949225 21949361 -63489119 - MIR SINE MIR -80 182 37 2301 95 7 0 chr17 21949606 21949902 -63488578 + AluSp SINE Alu 1 298 -15 2379 185 105 40 chr17 21949919 21950804 -63487676 + L1M4c LINE L1 1393 2219 -4163 1304 171 167 8 chr17 21950804 21951067 -63487413 + AluSx SINE Alu 1 305 -7 2379 185 105 40 chr17 21951067 21951230 -63487250 + L1M4c LINE L1 2219 2370 -4012 1613 193 10 7 chr17 21951230 21951525 -63486955 + AluJb SINE Alu 1 296 -16 2403 90 0 10 chr17 21951532 21951833 -63486647 + AluSg SINE Alu 1 298 -12 2379 185 105 40 chr17 21951833 21952179 -63486301 + L1M4c LINE L1 2375 2697 -3685 1534 197 7 27 chr17 21952179 21952478 -63486002 - AluJo SINE Alu -19 293 1 2379 185 105 40 chr17 21952478 21952553 -63485927 + L1M4c LINE L1 2697 3058 -3324 250 132 29 29 chr17 21952612 21952680 -63485800 + L1M4c LINE L1 3045 3112 -3270 1193 153 129 69 chr17 21952682 21952722 -63485758 - THE1C LTR MaLR 0 375 339 2087 128 3 0 chr17 21952722 21953020 -63485460 + AluSx SINE Alu 1 299 -13 1193 153 129 69 chr17 21953020 21953352 -63485128 - THE1C LTR MaLR -36 339 1 1033 192 39 32 chr17 21953353 21953519 -63484961 + L1M4c LINE L1 3111 3274 -3108 2123 130 0 7 chr17 21953519 21953818 -63484662 + AluSx SINE Alu 1 297 -15 2088 134 7 13 chr17 21953820 21954125 -63484355 + AluSx SINE Alu 1 303 -9 1033 192 39 32 chr17 21954125 21954236 -63484244 + L1M4c LINE L1 3274 3393 -2989 1736 161 4 0 chr17 21954238 21954517 -63483963 - AluJb SINE Alu -5 307 28 593 235 0 0 chr17 21954551 21954670 -63483810 + AluJb SINE Alu 142 260 -52 2240 110 7 0 chr17 21955668 21955968 -63482512 + AluSg SINE Alu 1 302 -8 198 0 0 0 chr17 21956602 21956624 -63481856 + (TTCA)n Simple_repeat Simple_repeat 1 22 0 859 287 120 28 chr17 21956624 21957166 -63481314 - L2 LINE L2 -13 3300 2715 271 164 36 0 chr17 21957221 21957276 -63481204 - LTR33A LTR ERVL -8 515 459 423 239 182 25 chr17 21957523 21957682 -63480798 - LTR50 LTR ERVL -594 201 18 1947 130 3 23 chr17 21957710 21958018 -63480462 + AluJo SINE Alu 1 302 -10 2548 114 88 26 chr17 21958054 21958741 -63479739 - MER4C-int LTR ERV1 -5752 846 1 2658 103 98 14 chr17 21958744 21959163 -63479317 - MER4C LTR ERV1 0 465 12 481 257 95 29 chr17 21959283 21959524 -63478956 - L2 LINE L2 -1123 2191 1935 328 279 34 20 chr17 21960844 21960991 -63477489 - L1M4 LINE L1 -801 5345 5197 538 128 0 23 chr17 21960996 21961082 -63477398 - HY4 scRNA scRNA -9 84 1 395 274 183 13 chr17 21961198 21961351 -63477129 - MER5A DNA MER1_type 0 189 11 2250 101 3 16 chr17 21961389 21961705 -63476775 - AluSx SINE Alu 0 312 1 879 148 7 21 chr17 21961778 21961920 -63476560 - FRAM SINE Alu -17 159 20 2407 87 0 0 chr17 21961937 21962247 -63476233 - AluY SINE Alu -1 310 1 194 222 0 0 chr17 21962718 21962754 -63475726 - L2 LINE L2 -219 3053 3018 2209 113 0 0 chr17 21964540 21964833 -63473647 - AluSx SINE Alu -15 297 5 4872 91 24 122 chr17 21964834 21965745 -63472735 - LTR12 LTR ERV1 0 826 5 2386 205 23 25 chr17 21965760 21966364 -63472116 - pTR5 LTR ERV1 -1093 1345 743 532 216 32 8 chr17 21967291 21967416 -63471064 - MIR SINE MIR -126 136 9 2167 103 0 70 chr17 21969935 21970264 -63468216 + AluSx SINE Alu 1 306 -6 2054 150 3 0 chr17 21970442 21970735 -63467745 + AluSx SINE Alu 1 294 -18 1934 165 0 3 chr17 21970756 21971053 -63467427 + AluJo SINE Alu 9 304 -8 1825 161 13 10 chr17 21971055 21971359 -63467121 + AluJb SINE Alu 1 305 -7 217 235 371 23 chr17 21971672 21971804 -63466676 - MER5B DNA MER1_type 0 178 1 * 226 337 63 11 chr17 21971804 21971889 -63466591 + MER5A DNA MER1_type 99 188 -1 604 243 29 0 chr17 21972141 21972277 -63466203 - MER58B DNA MER1_type 0 341 202 304 279 47 76 chr17 21973330 21973502 -63464978 - MLT1L LTR MaLR -2 613 447 300 247 12 37 chr17 21973647 21973728 -63464752 - MLT1L LTR MaLR -405 210 132 1636 74 5 5 chr17 21974292 21974508 -63463972 + AluSp SINE Alu 78 293 -20 347 0 23 0 chr17 21976869 21976912 -63461568 + (TG)n Simple_repeat Simple_repeat 2 45 0 407 223 121 15 chr17 21977540 21977746 -63460734 - L2 LINE L2 -653 2661 2434 225 280 75 37 chr17 21977874 21977981 -63460499 + L2 LINE L2 1893 2003 -1311 2111 106 0 3 chr17 21977987 21978328 -63460152 + AluSx SINE Alu 1 312 0 338 133 117 0 chr17 21978389 21978449 -63460031 - L1MA9 LINE L1 -174 6138 6072 25 0 0 0 chr17 21978449 21978474 -63460006 + AT_rich Low_complexity Low_complexity 1 25 0 667 236 141 19 chr17 21978612 21978925 -63459555 - L1ME4a LINE L1 -157 5964 5614 1899 154 7 0 chr17 21979046 21979351 -63459129 - AluSx SINE Alu -5 307 1 299 259 98 0 chr17 21979375 21979487 -63458993 - L1ME4a LINE L1 -516 5605 5483 380 245 245 37 chr17 21979497 21979660 -63458820 - L1ME4a LINE L1 -656 5465 5269 1925 143 0 0 chr17 21979746 21980040 -63458440 - AluSx SINE Alu -18 294 1 1669 112 124 8 chr17 21980135 21980402 -63458078 + AluSg SINE Alu 1 298 -2 22 0 0 0 chr17 21980402 21980424 -63458056 + AT_rich Low_complexity Low_complexity 1 22 0 306 308 144 53 chr17 21980452 21980507 -63457973 - L1ME4a LINE L1 -1086 5060 5011 2030 125 0 19 chr17 21980507 21980819 -63457661 + AluSx SINE Alu 1 306 -6 306 308 144 53 chr17 21980819 21981062 -63457418 - L1ME4a LINE L1 -1135 5011 4735 225 238 0 0 chr17 21981062 21981104 -63457376 - MIR SINE MIR -4 258 217 1881 151 10 26 chr17 21981120 21981432 -63457048 - AluJb SINE Alu -5 307 1 239 356 0 0 chr17 21981452 21981525 -63456955 - MIR SINE MIR -175 87 15 323 245 58 19 chr17 21981699 21981854 -63456626 - L1ME4a LINE L1 -1530 4616 4456 882 124 0 15 chr17 21981864 21982001 -63456479 - FRAM SINE Alu -6 170 36 2413 63 0 3 chr17 21982053 21982353 -63456127 - AluSc SINE Alu -10 299 1 574 284 52 26 chr17 21982740 21982969 -63455511 + MIR SINE MIR 6 240 -22 819 201 169 0 chr17 21983554 21983743 -63454737 + MER58A DNA MER1_type 4 224 0 2154 104 3 0 chr17 21984254 21984553 -63453927 + AluSg SINE Alu 1 300 -10 398 20 20 0 chr17 21984839 21984890 -63453590 + (TTTTTG)n Simple_repeat Simple_repeat 1 52 0 2187 111 0 0 chr17 21984928 21985234 -63453246 + AluSx SINE Alu 1 306 -6 305 298 0 53 chr17 21986016 21986130 -63452350 + MIR3 SINE MIR 78 185 -23 1830 158 7 3 chr17 21987864 21988161 -63450319 + AluJb SINE Alu 1 298 -14 322 352 14 7 chr17 21991062 21991207 -63447273 + MIR SINE MIR 3 148 -114 1906 142 0 7 chr17 21991688 21991983 -63446497 + AluSx SINE Alu 1 293 -19 2297 65 0 0 chr17 21992441 21992731 -63445749 + AluY SINE Alu 18 307 -4 283 317 81 12 chr17 21993210 21993371 -63445109 - MIR SINE MIR -20 242 71 2073 151 134 50 chr17 21993507 21993576 -63444904 - MLT1D LTR MaLR 0 505 443 1564 95 136 0 chr17 21993576 21993818 -63444662 + AluSx SINE Alu 1 275 -37 324 0 0 0 chr17 21993822 21993858 -63444622 + (CA)n Simple_repeat Simple_repeat 1 36 0 2073 151 134 50 chr17 21993858 21994247 -63444233 - MLT1D LTR MaLR -64 441 3 913 108 36 92 chr17 21994679 21994874 -63443606 + MER20 DNA MER1_type 36 219 0 275 320 45 26 chr17 21995168 21995324 -63443156 + L1M4 LINE L1 716 874 -5668 229 326 11 11 chr17 21995402 21995494 -63442986 + L1M4 LINE L1 875 966 -5576 * 10877 168 51 56 chr17 21995473 21995579 -63442901 + L1MA3 LINE L1 2216 2321 -4482 719 216 0 0 chr17 21995579 21995704 -63442776 - FLAM_A SINE Alu -8 125 1 10877 168 51 56 chr17 21995704 21996071 -63442409 + L1MA3 LINE L1 2321 2688 -4115 922 135 0 0 chr17 21996071 21996204 -63442276 + FLAM_C SINE Alu 1 133 0 10877 168 51 56 chr17 21996204 21996305 -63442175 + L1MA3 LINE L1 2688 2788 -4015 4442 95 21 12 chr17 21996305 21997320 -63441160 + SVA Other Other 1 1396 0 10877 168 51 56 chr17 21997320 21997471 -63441009 + L1MA3 LINE L1 2788 2938 -3865 1981 122 3 7 chr17 21997471 21997766 -63440714 + AluSq SINE Alu 1 294 -19 10877 168 51 56 chr17 21997766 21999350 -63439130 + L1MA3 LINE L1 2938 4528 -2275 303 81 0 0 chr17 21999350 21999387 -63439093 + U2 snRNA snRNA 1 37 -151 10877 168 51 56 chr17 21999387 22000083 -63438397 + L1MA3 LINE L1 4528 5226 -1577 1385 139 162 34 chr17 22000083 22000349 -63438131 - AluSx SINE Alu -1 301 2 1646 143 0 126 chr17 22000357 22000699 -63437781 - AluJo SINE Alu -3 299 1 10877 168 51 56 chr17 22000699 22000907 -63437573 + L1MA3 LINE L1 5233 5440 -1363 1976 160 0 0 chr17 22000907 22001214 -63437266 + AluJb SINE Alu 1 307 -5 10877 168 51 56 chr17 22001214 22002329 -63436151 + L1MA3 LINE L1 5440 6042 -761 2201 74 3 17 chr17 22002329 22002628 -63435852 + AluSp SINE Alu 1 295 -18 10877 168 51 56 chr17 22002628 22003387 -63435093 + L1MA3 LINE L1 6042 6803 0 6056 219 52 56 chr17 22003376 22003445 -63435035 + L1M4 LINE L1 3161 3229 -2917 * 2177 107 0 0 chr17 22003445 22003745 -63434735 + AluSg SINE Alu 6 305 -5 6056 219 52 56 chr17 22003745 22004343 -63434137 + L1M4 LINE L1 3229 3828 -2318 2140 108 0 0 chr17 22004343 22004631 -63433849 + AluSc SINE Alu 1 288 -21 6056 219 52 56 chr17 22004631 22004983 -63433497 + L1M4 LINE L1 3828 4180 -1966 1907 119 14 0 chr17 22004983 22005100 -63433380 + AluSx SINE Alu 1 115 -197 237 33 0 0 chr17 22005100 22005130 -63433350 + (TAA)n Simple_repeat Simple_repeat 1 30 0 1907 119 14 0 chr17 22005130 22005307 -63433173 + AluSx SINE Alu 115 299 -13 6056 219 52 56 chr17 22005307 22006128 -63432352 + L1M4 LINE L1 4180 4998 -1148 2260 88 0 0 chr17 22006128 22006424 -63432056 + AluSg SINE Alu 1 296 -14 6056 219 52 56 chr17 22006424 22006624 -63431856 + L1M4 LINE L1 4998 5197 -949 1009 115 142 40 chr17 22006599 22006825 -63431655 + L1MA8 LINE L1 6017 6265 -26 * 926 158 35 6 chr17 22006833 22007004 -63431476 + FRAM SINE Alu 1 40 0 23 0 0 0 chr17 22007056 22007079 -63431401 + AT_rich Low_complexity Low_complexity 1 23 0 559 83 94 10 chr17 22007079 22007175 -63431305 + L1M4 LINE L1 5195 5298 -848 1803 165 74 85 chr17 22007175 22007220 -63431260 + MLT1C LTR MaLR 1 45 -422 1934 138 3 3 chr17 22007220 22007516 -63430964 - AluSq SINE Alu -17 296 1 1803 165 74 85 chr17 22007516 22007663 -63430817 + MLT1C LTR MaLR 45 192 -275 2038 104 3 39 chr17 22007663 22007971 -63430509 + AluSc SINE Alu 1 297 -12 1803 165 74 85 chr17 22007971 22008237 -63430243 + MLT1C LTR MaLR 192 455 -12 1477 189 26 8 chr17 22008237 22008502 -63429978 - MSTD LTR MaLR 0 396 127 2142 81 0 24 chr17 22008502 22008800 -63429680 + AluY SINE Alu 1 291 -20 610 193 0 0 chr17 22008847 22008956 -63429524 + FLAM_C SINE Alu 35 143 0 305 172 234 0 chr17 22008956 22009020 -63429460 - MSTD LTR MaLR -317 79 1 1399 204 0 32 chr17 22009074 22009387 -63429093 - AluJo SINE Alu -9 303 1 480 293 64 0 chr17 22009395 22009552 -63428928 + L1M4 LINE L1 5315 5481 -693 688 233 43 0 chr17 22009562 22009725 -63428755 + L1ME1 LINE L1 4606 4775 -1371 1804 144 7 13 chr17 22009841 22010147 -63428333 - AluSx SINE Alu -8 304 1 404 158 61 0 chr17 22010185 22010267 -63428213 - L1MB2 LINE L1 0 6171 6085 1208 171 21 1 chr17 22010267 22010563 -63427917 - MER2 DNA MER2_type -1 344 2 999 215 93 23 chr17 22010564 22010866 -63427614 + L1ME1 LINE L1 4774 5096 -1050 1474 151 0 76 chr17 22010867 22011171 -63427309 - AluJo SINE Alu -7 305 25 2156 213 75 9 chr17 22011210 22011759 -63426721 + L1ME1 LINE L1 5578 6162 -4 1871 139 7 13 chr17 22011972 22012274 -63426206 + AluJo SINE Alu 1 300 -12 2311 92 0 7 chr17 22012376 22012681 -63425799 + AluSx SINE Alu 1 303 -9 607 168 0 0 chr17 22013191 22013286 -63425194 + AluJo SINE Alu 1 95 -217 1392 111 0 39 chr17 22013408 22013616 -63424864 + AluJo SINE Alu 98 297 -15 216 191 235 0 chr17 22013961 22014029 -63424451 - MIR SINE MIR -18 244 161 798 179 49 22 chr17 22014875 22015059 -63423421 + MER5A DNA MER1_type 1 189 0 531 198 95 86 chr17 22016172 22016315 -63422165 - Charlie8 DNA MER1_type -2122 295 148 2096 110 10 3 chr17 22016315 22016614 -63421866 - AluSg SINE Alu -9 301 1 531 198 95 86 chr17 22016614 22016702 -63421778 - Charlie8 DNA MER1_type -2269 148 62 1936 133 7 3 chr17 22017090 22017391 -63421089 - AluJb SINE Alu -10 302 1 261 307 80 7 chr17 22017533 22017670 -63420810 + MIR3 SINE MIR 2 148 -60 334 280 160 0 chr17 22018817 22018942 -63419538 + MIR SINE MIR 91 235 -27 727 236 52 82 chr17 22020931 22021198 -63417282 + MIR SINE MIR 2 260 -2 348 298 189 45 chr17 22021842 22021951 -63416529 + L1ME4a LINE L1 4975 5067 -1079 2363 78 0 0 chr17 22021951 22022245 -63416235 - AluSq SINE Alu -19 294 1 348 298 189 45 chr17 22022245 22022307 -63416173 + L1ME4a LINE L1 5067 5119 -1027 2131 99 20 0 chr17 22022307 22022601 -63415879 - AluSp SINE Alu -13 300 1 348 298 189 45 chr17 22022601 22022740 -63415740 + L1ME4a LINE L1 5119 5331 -815 334 292 165 34 chr17 22022759 22022802 -63415678 + L1ME4a LINE L1 5379 5415 -706 2343 94 10 0 chr17 22022802 22023111 -63415369 + AluSx SINE Alu 1 312 0 334 292 165 34 chr17 22023111 22023597 -63414883 + L1ME4a LINE L1 5415 6013 -108 2247 86 3 3 chr17 22023597 22023887 -63414593 + AluSx SINE Alu 1 290 -22 334 292 165 34 chr17 22023887 22024010 -63414470 + L1ME4a LINE L1 6013 6118 -3 29 0 0 0 chr17 22024566 22024595 -63413885 + AT_rich Low_complexity Low_complexity 1 29 0 2248 82 0 3 chr17 22024600 22024908 -63413572 + AluSc SINE Alu 1 307 0 269 250 52 9 chr17 22027040 22027156 -63411324 + L1ME4a LINE L1 5966 6086 -35 2197 89 3 3 chr17 22027186 22027499 -63410981 - AluSq SINE Alu 0 313 1 197 262 33 0 chr17 22028488 22028549 -63409931 - MIR SINE MIR -104 104 42 294 278 117 43 chr17 22031780 22031942 -63406538 - MLT1H LTR MaLR -374 181 8 204 173 58 0 chr17 22031946 22031998 -63406482 + CT-rich Low_complexity Low_complexity 2 56 0 256 286 13 0 chr17 22032795 22032872 -63405608 + CT-rich Low_complexity Low_complexity 2 79 0 2698 142 69 32 chr17 22033091 22033626 -63404854 + L1MC2 LINE L1 5789 6343 -1 2407 145 10 64 chr17 22033723 22034179 -63404301 + L1MB8 LINE L1 5703 6131 -47 2329 52 0 45 chr17 22034179 22034487 -63403993 + AluY SINE Alu 1 294 -17 2407 145 10 64 chr17 22034487 22034527 -63403953 + L1MB8 LINE L1 6131 6172 -6 303 93 0 0 chr17 22034917 22034960 -63403520 + (A)n Simple_repeat Simple_repeat 1 43 0 2847 6 0 0 chr17 22035031 22035345 -63403135 - AluYb8 SINE Alu -4 314 1 788 234 65 9 chr17 22035353 22035567 -63402913 - L1ME3A LINE L1 0 6170 5945 226 258 112 0 chr17 22035634 22035723 -63402757 - MLT1L LTR MaLR -476 139 41 335 314 111 34 chr17 22036905 22036999 -63401481 + MIR SINE MIR 40 125 -137 3136 156 26 26 chr17 22036999 22037519 -63400961 + L1MB2 LINE L1 5604 6126 -45 2149 103 0 17 chr17 22037519 22037821 -63400659 - AluSx SINE Alu -15 297 1 3136 156 26 26 chr17 22037821 22037865 -63400615 + L1MB2 LINE L1 6125 6168 -3 335 314 111 34 chr17 22037865 22037977 -63400503 + MIR SINE MIR 125 262 0 237 180 0 0 chr17 22038166 22038216 -63400264 + GA-rich Low_complexity Low_complexity 3 52 0 583 270 75 17 chr17 22038348 22038568 -63399912 - MIR SINE MIR -20 242 16 310 250 0 0 chr17 22038666 22038734 -63399746 + MER117 DNA MER1_type 112 179 -18 311 346 148 0 chr17 22040068 22040230 -63398250 - MIR SINE MIR 0 262 77 2206 93 0 19 chr17 22040395 22040705 -63397775 + AluSg SINE Alu 1 304 -6 2185 99 3 0 chr17 22040853 22041147 -63397333 - AluSq SINE Alu -18 295 1 579 87 0 29 chr17 22041685 22041788 -63396692 + MLT1A1 LTR MaLR 1 100 -265 811 91 0 50 chr17 22041824 22041945 -63396535 + AluSq/x SINE Alu 21 135 -177 2286 113 0 0 chr17 22041945 22042255 -63396225 + AluSx SINE Alu 1 310 -2 183 265 118 0 chr17 22042274 22042342 -63396138 + MER5B DNA MER1_type 59 134 -44 1975 122 7 0 chr17 22043537 22043824 -63394656 - AluSx SINE Alu 0 312 24 213 336 21 86 chr17 22044325 22044465 -63394015 - L3b LINE CR1 -276 1307 1177 184 268 36 0 chr17 22044545 22044601 -63393879 + MIR SINE MIR 88 145 -63 1767 148 38 0 chr17 22044604 22044895 -63393585 + AluJb SINE Alu 7 308 -4 210 346 115 8 chr17 22045090 22045220 -63393260 - L3 LINE CR1 -532 1045 902 2025 142 0 13 chr17 22045222 22045532 -63392948 + AluSx SINE Alu 1 306 -6 454 300 66 40 chr17 22045622 22045849 -63392631 - L2 LINE L2 -1 3312 3080 202 244 146 12 chr17 22045928 22046010 -63392470 - L2 LINE L2 -474 2840 2748 1727 193 10 0 chr17 22046018 22046324 -63392156 - AluJb SINE Alu -3 309 1 1464 172 97 30 chr17 22046325 22046652 -63391828 - MER67C LTR ERV1 -321 389 34 1766 171 3 20 chr17 22046652 22046957 -63391523 - AluJo SINE Alu -11 301 2 1464 172 97 30 chr17 22046957 22046990 -63391490 - MER67C LTR ERV1 -676 34 5 759 320 123 5 chr17 22046996 22047279 -63391201 - L2 LINE L2 -601 2713 2360 2235 107 0 0 chr17 22047279 22047578 -63390902 + AluSg SINE Alu 1 299 -11 759 320 123 5 chr17 22047578 22047725 -63390755 - L2 LINE L2 -954 2360 2232 203 337 102 44 chr17 22047731 22048075 -63390405 - L2 LINE L2 -1251 2063 1700 1888 144 16 16 chr17 22048076 22048388 -63390092 - AluJo SINE Alu 0 312 1 339 234 144 9 chr17 22050201 22050312 -63388168 + MIR3 SINE MIR 52 177 -31 463 353 0 0 chr17 22050836 22050969 -63387511 - MIR SINE MIR -102 160 28 281 229 49 49 chr17 22052045 22052140 -63386340 + L1ME4a LINE L1 5999 6096 -25 1760 157 0 47 chr17 22052140 22052458 -63386022 - AluJo SINE Alu -9 303 1 281 229 49 49 chr17 22052458 22052484 -63385996 + L1ME4a LINE L1 6095 6120 -1 245 294 261 5 chr17 22053219 22053437 -63385043 + L2 LINE L2 2951 3224 -48 2097 107 3 19 chr17 22055608 22055925 -63382555 + AluSx SINE Alu 1 312 0 213 200 11 78 chr17 22056227 22056317 -63382163 + G-rich Low_complexity Low_complexity 4 87 0 1864 91 0 30 chr17 22057595 22057858 -63380622 + AluSq SINE Alu 1 255 -58 239 73 49 0 chr17 22058026 22058067 -63380413 + GA-rich Low_complexity Low_complexity 2 44 0 867 140 0 0 chr17 22058097 22058240 -63380240 + (TG)n Simple_repeat Simple_repeat 1 143 0 388 277 41 82 chr17 22059279 22059474 -63379006 - MIR SINE MIR -74 188 2 206 331 69 23 chr17 22060594 22060724 -63377756 + L2 LINE L2 2750 2885 -429 215 290 142 30 chr17 22060741 22060910 -63377570 + L2 LINE L2 3126 3313 0 183 248 74 83 chr17 22061786 22061907 -63376573 - L2 LINE L2 -2583 731 612 1751 132 61 0 chr17 22062009 22062289 -63376191 - AluJb SINE Alu 0 312 16 666 324 108 27 chr17 22062313 22062913 -63375567 + L2 LINE L2 2560 3207 -65 225 0 0 0 chr17 22063039 22063064 -63375416 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 1143 129 43 69 chr17 22063149 22063203 -63375277 + AluJo SINE Alu 87 141 -171 2367 79 3 10 chr17 22063203 22063508 -63374972 + AluSx SINE Alu 1 303 -9 1143 129 43 69 chr17 22063508 22063685 -63374795 + AluJo SINE Alu 141 312 0 911 165 16 6 chr17 22063736 22063918 -63374562 + L1MA4 LINE L1 5893 6076 -224 1495 172 4 4 chr17 22063918 22064174 -63374306 + AluJo SINE Alu 1 256 -56 446 293 234 32 chr17 22065528 22065905 -63372575 - L1M4 LINE L1 -757 5389 4942 2311 107 0 0 chr17 22065907 22066216 -63372264 - AluSg1 SINE Alu 0 309 1 861 211 66 9 chr17 22066269 22066482 -63371998 - MIR SINE MIR 0 262 38 406 359 53 19 chr17 22067961 22068167 -63370313 - L1M4 LINE L1 -3532 2614 2402 1158 110 62 73 chr17 22069938 22069978 -63368502 + L1MB3 LINE L1 5787 5826 -357 1337 179 126 8 chr17 22069978 22070240 -63368240 + AluJo SINE Alu 1 293 -9 2186 124 3 0 chr17 22070247 22070553 -63367927 + AluSx SINE Alu 1 307 -5 1158 110 62 73 chr17 22070553 22070776 -63367704 + L1MB3 LINE L1 5832 6055 -128 767 101 0 9 chr17 22070780 22070889 -63367591 + AluSp SINE Alu 1 108 -205 187 284 218 3 chr17 22071532 22071835 -63366645 + L2 LINE L2 207 574 -2740 3477 164 48 5 chr17 22072132 22072801 -63365679 - L1MB3 LINE L1 -1 6182 5485 2300 103 0 7 chr17 22073002 22073303 -63365177 + AluSx SINE Alu 1 299 -13 330 26 0 0 chr17 22073419 22073458 -63365022 + (TCC)n Simple_repeat Simple_repeat 2 40 0 297 299 20 13 chr17 22074136 22074355 -63364125 - ERVL LTR ERVL -1438 4326 4032 264 304 99 56 chr17 22074590 22074751 -63363729 + LTR67 LTR ERVL 121 288 -269 271 160 85 85 chr17 22074822 22074916 -63363564 + LTR67 LTR ERVL 434 527 -30 901 213 167 62 chr17 22074935 22075419 -63363061 + MLT1H LTR MaLR 15 549 0 2276 106 3 0 chr17 22075625 22075927 -63362553 + AluSx SINE Alu 1 303 -9 553 219 0 0 chr17 22076125 22076239 -63362241 + MIR SINE MIR 19 132 -130 2225 101 14 0 chr17 22076285 22076581 -63361899 + AluSq SINE Alu 1 300 -13 498 239 62 34 chr17 22076637 22076813 -63361667 - L2 LINE L2 -14 3299 3119 2393 106 0 0 chr17 22077260 22077563 -63360917 - AluSq SINE Alu -10 303 1 334 276 122 30 chr17 22078659 22078834 -63359646 - MIR SINE MIR -8 254 65 2197 111 13 3 chr17 22078935 22079242 -63359238 + AluSx SINE Alu 1 310 -2 754 194 69 7 chr17 22079248 22079392 -63359088 + Tigger7 DNA MER2_type 77 229 -321 501 211 9 26 chr17 22079397 22079511 -63358969 + Tigger7 DNA MER2_type 2376 2487 0 373 235 37 0 chr17 22079511 22079591 -63358889 + MER58B DNA MER1_type 259 341 0 213 363 30 0 chr17 22080038 22080173 -63358307 - MIR SINE MIR -38 224 86 2261 92 18 0 chr17 22080440 22080724 -63357756 + AluSx SINE Alu 1 289 -23 225 0 0 0 chr17 22080725 22080750 -63357730 + (CA)n Simple_repeat Simple_repeat 2 26 0 1003 149 6 40 chr17 22080750 22080924 -63357556 + AluSg/x SINE Alu 131 298 -14 1854 131 4 11 chr17 22080991 22081265 -63357215 + AluSx SINE Alu 22 293 -19 228 254 189 41 chr17 22082675 22082797 -63355683 + MIR SINE MIR 59 198 -64 393 291 140 0 chr17 22083083 22083262 -63355218 - MIR SINE MIR -15 247 44 2436 50 20 3 chr17 22084194 22084493 -63353987 + AluY SINE Alu 3 306 -5 1866 121 68 11 chr17 22084506 22084787 -63353693 + AluSg SINE Alu 1 297 -13 189 283 43 33 chr17 22085850 22085942 -63352538 + MIR SINE MIR 55 147 -115 25 0 0 0 chr17 22086029 22086054 -63352426 + AT_rich Low_complexity Low_complexity 1 25 0 238 200 55 0 chr17 22088447 22088502 -63349978 - MIR SINE MIR -51 211 154 480 170 0 0 chr17 22088506 22088612 -63349868 + (TCTA)n Simple_repeat Simple_repeat 1 106 0 2056 129 0 0 chr17 22088618 22088897 -63349583 - AluSx SINE Alu -33 279 1 284 252 193 8 chr17 22088898 22089017 -63349463 - MIR SINE MIR -114 148 8 285 127 18 18 chr17 22089650 22089705 -63348775 - L2 LINE L2 0 3313 3259 786 187 0 0 chr17 22090123 22090246 -63348234 - FLAM_A SINE Alu -10 123 1 2277 122 0 3 chr17 22090742 22091053 -63347427 + AluSx SINE Alu 2 311 -1 2297 114 7 0 chr17 22091384 22091691 -63346789 + AluSx SINE Alu 1 309 -3 1928 148 6 31 chr17 22092726 22093044 -63345436 - AluJb SINE Alu -2 310 1 2201 110 0 0 chr17 22094126 22094452 -63344028 + AluSx SINE Alu 1 326 0 2334 79 0 3 chr17 22094677 22094967 -63343513 + AluSg SINE Alu 15 303 -7 25 0 0 0 chr17 22095723 22095748 -63342732 + AT_rich Low_complexity Low_complexity 1 25 0 2169 135 6 6 chr17 22096006 22096318 -63342162 - AluJb SINE Alu 0 312 1 26 0 0 0 chr17 22096679 22096705 -63341775 + AT_rich Low_complexity Low_complexity 1 26 0 2107 120 7 17 chr17 22096709 22097009 -63341471 - AluSq SINE Alu -16 297 1 286 270 29 27 chr17 22097185 22097367 -63341113 - MIR SINE MIR -9 253 75 2429 98 0 0 chr17 22097929 22098235 -63340245 + AluSx SINE Alu 6 311 -1 500 237 9 7 chr17 22098236 22098371 -63340109 + L1MEc LINE L1 1656 1790 -4594 2308 82 34 0 chr17 22098487 22098779 -63339701 - AluSc SINE Alu -7 302 1 953 163 6 6 chr17 22098783 22098943 -63339537 - FRAM SINE Alu -16 160 1 241 285 0 73 chr17 22099002 22099139 -63339341 + L1MEc LINE L1 1898 2024 -4539 12862 146 109 16 chr17 22099152 22101453 -63337027 + L1M4 LINE L1 21 2537 -5028 4842 161 51 30 chr17 22101439 22101627 -63336853 + L1M4 LINE L1 3133 3316 -4249 * 2231 115 0 0 chr17 22101627 22101923 -63336557 + AluSq SINE Alu 1 296 -17 4842 161 51 30 chr17 22101923 22102762 -63335718 + L1M4 LINE L1 3316 4217 -3348 1712 143 46 55 chr17 22102762 22102899 -63335581 + AluSx SINE Alu 3 140 -172 2100 137 0 0 chr17 22102899 22103192 -63335288 + AluSx SINE Alu 5 297 -15 1712 143 46 55 chr17 22103192 22103361 -63335119 + AluSx SINE Alu 140 306 -6 4842 161 51 30 chr17 22103361 22103852 -63334628 + L1M4 LINE L1 4217 4696 -2869 967 180 62 12 chr17 22103852 22104082 -63334398 + MSTD LTR MaLR 114 396 0 667 101 0 0 chr17 22104145 22104244 -63334236 + AluY SINE Alu 213 311 0 1473 221 32 52 chr17 22104263 22104478 -63334002 + L1M4 LINE L1 6042 6245 -1320 2275 115 27 27 chr17 22104478 22104853 -63333627 - THE1C LTR MaLR 0 375 1 1473 221 32 52 chr17 22104853 22105077 -63333403 + L1M4 LINE L1 6245 6472 -1093 3153 154 53 68 chr17 22105083 22105734 -63332746 + L1MCb LINE L1 724 1374 -5190 319 79 0 0 chr17 22105734 22105772 -63332708 + tRNA-Lys-AAG tRNA tRNA 1 38 -38 3153 154 53 68 chr17 22105772 22106122 -63332358 + L1MCb LINE L1 1374 1728 -4836 215 282 53 92 chr17 22106245 22106316 -63332164 - MER5A DNA MER1_type -1 188 123 2116 79 0 11 chr17 22106316 22106583 -63331897 + AluY SINE Alu 30 293 -18 215 282 53 92 chr17 22106583 22106642 -63331838 - MER5A DNA MER1_type -66 123 63 234 0 0 0 chr17 22106840 22106866 -63331614 + (A)n Simple_repeat Simple_repeat 1 26 0 529 185 0 0 chr17 22106976 22107068 -63331412 + MLT1D LTR MaLR 414 505 0 2039 150 211 19 chr17 22107873 22108300 -63330180 + LTR22 LTR ERVK 1 509 0 319 186 127 85 chr17 22108301 22108419 -63330061 + MIR SINE MIR 22 144 -118 2113 142 0 10 chr17 22108506 22108808 -63329672 + AluSx SINE Alu 3 301 -11 23 33 0 0 chr17 22110302 22110332 -63328148 + AT_rich Low_complexity Low_complexity 1 30 0 2382 98 0 0 chr17 22110373 22110670 -63327810 + AluSg SINE Alu 1 297 -13 1308 276 58 15 chr17 22111394 22111804 -63326676 + LTR16B LTR ERVL 37 464 0 1860 152 3 37 chr17 22112784 22113107 -63325373 + AluJb SINE Alu 1 312 0 307 305 131 34 chr17 22113517 22113753 -63324727 - L1MC4a LINE L1 -1649 6159 5901 4792 187 122 19 chr17 22113760 22115072 -63323408 - Charlie1 DNA MER1_type -6 2755 1 422 329 61 26 chr17 22115076 22115304 -63323176 - L1MC4a LINE L1 -1905 5903 5668 954 104 0 15 chr17 22115593 22115728 -63322752 + FLAM_C SINE Alu 1 133 0 311 284 57 11 chr17 22115751 22115839 -63322641 - HAL1 LINE L1 -2379 128 37 253 169 28 28 chr17 22115927 22115998 -63322482 + (TA)n Simple_repeat Simple_repeat 1 71 0 447 270 45 34 chr17 22117011 22117189 -63321291 + MLT1J LTR MaLR 1 180 -331 312 244 35 23 chr17 22119268 22119354 -63319126 + MER119 DNA MER1_type 1 87 -496 1999 86 8 4 chr17 22119354 22119609 -63318871 + AluSq SINE Alu 38 293 -20 5171 174 18 11 chr17 22119619 22120938 -63317542 + L1MB2 LINE L1 4839 6168 -3 2362 95 3 3 chr17 22120943 22121248 -63317232 + AluSx SINE Alu 1 305 -7 1141 131 0 0 chr17 22121248 22121408 -63317072 + AluSg/x SINE Alu 134 293 -19 2393 97 3 0 chr17 22121442 22121750 -63316730 + AluY SINE Alu 1 309 -2 24 67 0 0 chr17 22121820 22121865 -63316615 + AT_rich Low_complexity Low_complexity 1 45 0 868 142 8 0 chr17 22122465 22122592 -63315888 + FLAM_C SINE Alu 1 128 -5 224 301 0 32 chr17 22122593 22122686 -63315794 - L2 LINE L2 -159 3154 3065 226 272 138 59 chr17 22122739 22122925 -63315555 + L1MC4a LINE L1 6075 6288 -1520 2350 107 0 7 chr17 22122925 22123234 -63315246 - AluSx SINE Alu -5 307 1 226 272 138 59 chr17 22123234 22123301 -63315179 + L1MC4a LINE L1 6288 6348 -1460 1125 233 52 0 chr17 22123448 22123718 -63314762 + HAL1 LINE L1 92 375 -2132 279 317 49 7 chr17 22123716 22123858 -63314622 + L1MA9 LINE L1 6083 6230 -82 * 1981 196 18 25 chr17 22123858 22124251 -63314229 - MER47B DNA MER2_type -1 417 28 1083 263 93 55 chr17 22124327 22124779 -63313701 + HAL1 LINE L1 352 820 -1687 326 174 210 18 chr17 22124795 22124962 -63313518 + HAL1 LINE L1 995 1193 -1314 446 204 124 9 chr17 22125071 22125184 -63313296 - L2 LINE L2 -1315 1999 1874 533 257 65 36 chr17 22125187 22125494 -63312986 + L1M4 LINE L1 4382 4697 -1449 294 29 0 0 chr17 22125897 22125932 -63312548 + (TA)n Simple_repeat Simple_repeat 1 35 0 1448 173 135 4 chr17 22125937 22126203 -63312277 - AluJo SINE Alu 0 302 2 746 215 0 8 chr17 22126208 22126338 -63312142 - FLAM_C SINE Alu -3 130 2 835 193 93 0 chr17 22126447 22126608 -63311872 - MER46A DNA MER2_type -60 176 1 2244 82 3 70 chr17 22126741 22127072 -63311408 - AluSg SINE Alu 0 310 2 851 36 18 27 chr17 22127249 22127361 -63311119 + L1PA4 LINE L1 6045 6155 0 195 273 18 0 chr17 22129450 22129505 -63308975 - MIR SINE MIR -3 259 204 241 69 0 0 chr17 22129524 22129553 -63308927 + AluY SINE Alu 14 42 -258 2372 54 0 4 chr17 22129553 22129832 -63308648 + AluY SINE Alu 21 298 -13 224 300 138 0 chr17 22129858 22129938 -63308542 - MIR SINE MIR -118 144 54 608 317 94 57 chr17 22129975 22130283 -63308197 + L2 LINE L2 1428 1723 -1591 2328 95 0 0 chr17 22130283 22130578 -63307902 - AluSg SINE Alu -2 308 14 608 317 94 57 chr17 22130578 22131181 -63307299 + L2 LINE L2 1723 2373 -941 2512 70 0 0 chr17 22131538 22131839 -63306641 - AluSc SINE Alu -8 301 1 817 211 0 0 chr17 22131995 22132151 -63306329 + MER3 DNA MER1_type 19 127 -82 196 303 123 41 chr17 22132394 22132516 -63305964 + L2 LINE L2 3182 3313 0 2286 93 0 0 chr17 22132517 22132806 -63305674 + AluSx SINE Alu 1 289 -23 596 116 35 0 chr17 22133248 22133334 -63305146 - AluJ SINE Alu -25 287 199 1047 132 0 0 chr17 22133334 22133478 -63305002 - AluJ SINE Alu -168 144 1 1910 145 35 0 chr17 22133487 22133777 -63304703 - AluSx SINE Alu -12 300 1 2048 142 0 19 chr17 22133844 22134160 -63304320 - AluSx SINE Alu -2 310 1 2196 123 0 0 chr17 22134169 22134478 -63304002 - AluY SINE Alu -2 309 1 250 118 0 39 chr17 22134482 22134533 -63303947 - FLAM_A SINE Alu 0 133 85 802 204 0 39 chr17 22134533 22134714 -63303766 - AluJo SINE Alu -92 220 47 205 321 168 10 chr17 22135066 22135262 -63303218 - MIR SINE MIR 0 262 36 236 228 148 40 chr17 22135443 22135544 -63302936 - MIR SINE MIR -27 235 124 2062 101 50 7 chr17 22135670 22135967 -63302513 + AluSx SINE Alu 1 310 -2 228 303 75 30 chr17 22136294 22136457 -63302023 - MIR SINE MIR -77 131 20 1966 116 58 0 chr17 22136920 22137195 -63301285 + AluSx SINE Alu 1 291 -21 2304 77 3 0 chr17 22137197 22137518 -63300962 + AluSp SINE Alu 1 322 0 35 63 0 0 chr17 22137846 22137909 -63300571 + AT_rich Low_complexity Low_complexity 1 63 0 2514 53 0 7 chr17 22138166 22138468 -63300012 + AluY SINE Alu 1 300 -11 277 331 74 51 chr17 22138741 22138916 -63299564 - MIR SINE MIR -80 182 4 2280 95 7 0 chr17 22139122 22139418 -63299062 + AluSp SINE Alu 1 298 -15 2407 185 105 40 chr17 22139435 22140320 -63298160 + L1M4c LINE L1 1393 2219 -4163 1297 171 167 8 chr17 22140320 22140583 -63297897 + AluSx SINE Alu 1 305 -7 2407 185 105 40 chr17 22140583 22140746 -63297734 + L1M4c LINE L1 2219 2370 -4012 1595 193 10 7 chr17 22140746 22141041 -63297439 + AluJb SINE Alu 1 296 -16 2385 90 0 10 chr17 22141048 22141349 -63297131 + AluSg SINE Alu 1 298 -12 2407 185 105 40 chr17 22141349 22141695 -63296785 + L1M4c LINE L1 2375 2697 -3685 1528 197 7 27 chr17 22141695 22141994 -63296486 - AluJo SINE Alu -19 293 1 2407 185 105 40 chr17 22141994 22142069 -63296411 + L1M4c LINE L1 2697 3058 -3324 254 132 29 29 chr17 22142128 22142196 -63296284 + L1M4c LINE L1 3045 3112 -3270 1191 153 129 69 chr17 22142198 22142238 -63296242 - THE1C LTR MaLR 0 375 339 2074 128 3 0 chr17 22142238 22142536 -63295944 + AluSx SINE Alu 1 299 -13 1191 153 129 69 chr17 22142536 22142868 -63295612 - THE1C LTR MaLR -36 339 1 1056 192 39 32 chr17 22142869 22143035 -63295445 + L1M4c LINE L1 3111 3274 -3108 2098 130 0 7 chr17 22143035 22143334 -63295146 + AluSx SINE Alu 1 297 -15 2075 134 7 13 chr17 22143336 22143641 -63294839 + AluSx SINE Alu 1 303 -9 1056 192 39 32 chr17 22143641 22143752 -63294728 + L1M4c LINE L1 3274 3393 -2989 1909 152 17 0 chr17 22143754 22144056 -63294424 - AluJb SINE Alu -5 307 1 890 256 39 32 chr17 22144268 22144333 -63294147 + L1M4b LINE L1 1232 1295 -5564 2329 123 0 0 chr17 22144333 22144643 -63293837 + AluSx SINE Alu 1 310 -2 890 256 39 32 chr17 22144643 22144858 -63293622 + L1M4b LINE L1 1295 1514 -5345 316 26 0 0 chr17 22144860 22144898 -63293582 - AluY SINE Alu -8 292 255 1397 113 0 5 chr17 22144919 22145114 -63293366 + AluSq SINE Alu 1 194 -119 2008 214 96 45 chr17 22145126 22145794 -63292686 + L1M4b LINE L1 1572 2273 -4686 263 198 81 12 chr17 22146030 22146116 -63292364 + L1M4b LINE L1 2324 2415 -4544 1664 199 10 0 chr17 22146122 22146423 -63292057 + AluJb SINE Alu 1 304 -8 630 168 134 28 chr17 22146774 22146953 -63291527 + L1M4b LINE L1 2863 3060 -3899 451 149 241 0 chr17 22146953 22147040 -63291440 + AluJb SINE Alu 2 109 -203 253 248 79 0 chr17 22147040 22147141 -63291339 - MSTA LTR MaLR -319 109 1 725 196 25 6 chr17 22147142 22147305 -63291175 + L1M4b LINE L1 3686 3851 -3106 2439 55 0 3 chr17 22147308 22147601 -63290879 + AluY SINE Alu 1 292 -19 1674 181 0 74 chr17 22147712 22147857 -63290623 + AluJo SINE Alu 1 155 -147 1953 102 0 102 chr17 22147857 22148000 -63290480 + AluSq SINE Alu 1 92 -221 2394 99 0 0 chr17 22148000 22148304 -63290176 + AluSg SINE Alu 1 304 -6 1953 102 0 102 chr17 22148304 22148494 -63289986 + AluSq SINE Alu 92 300 -13 2243 85 0 4 chr17 22148496 22148806 -63289674 + AluSg1 SINE Alu 1 309 0 1674 181 0 74 chr17 22148806 22148982 -63289498 + AluJo SINE Alu 156 302 0 1852 152 0 11 chr17 22149012 22149323 -63289157 + AluJb SINE Alu 6 313 0 1990 222 97 19 chr17 22149327 22150251 -63288229 + L2 LINE L2 2223 3312 -1 2421 81 0 13 chr17 22150617 22150927 -63287553 + AluY SINE Alu 1 306 -5 320 294 70 48 chr17 22151234 22151254 -63287226 + L1MC/D LINE L1 5347 5365 -2443 2189 126 10 0 chr17 22151254 22151563 -63286917 + AluSx SINE Alu 1 312 0 320 294 70 48 chr17 22151563 22151729 -63286751 + L1MC/D LINE L1 5365 5537 -2271 294 243 278 28 chr17 22151759 22151828 -63286652 + L1MC/D LINE L1 5609 5660 -2148 267 31 0 0 chr17 22151828 22151860 -63286620 + (CA)n Simple_repeat Simple_repeat 2 33 0 294 243 278 28 chr17 22151860 22151934 -63286546 + L1MC/D LINE L1 5659 5788 -2020 21 36 0 0 chr17 22152428 22152456 -63286024 + AT_rich Low_complexity Low_complexity 1 28 0 2047 117 0 39 chr17 22152466 22152774 -63285706 + AluSx SINE Alu 1 296 -16 2687 51 3 0 chr17 22154057 22154369 -63284111 - AluSp SINE Alu 0 313 1 2340 95 0 3 chr17 22155526 22155831 -63282649 - AluSg SINE Alu -6 304 1 302 255 31 10 chr17 22155854 22155952 -63282528 + L1MC4 LINE L1 7925 8024 -18 549 220 59 8 chr17 22156179 22156297 -63282183 - FLAM_A SINE Alu -9 124 1 40 0 0 0 chr17 22156420 22156460 -63282020 + AT_rich Low_complexity Low_complexity 1 40 0 186 384 41 14 chr17 22157589 22157632 -63280848 + L3b LINE CR1 1481 1555 -28 188 200 0 0 chr17 22157632 22157662 -63280818 + MIR3 SINE MIR 147 176 -32 2114 100 0 53 chr17 22157700 22158021 -63280459 + AluSx SINE Alu 1 304 -8 2292 104 0 0 chr17 22158231 22158528 -63279952 + AluSx SINE Alu 1 297 -15 1913 138 10 3 chr17 22159429 22159719 -63278761 - AluSx SINE Alu -20 292 1 445 246 126 24 chr17 22159751 22159918 -63278562 + MIR SINE MIR 8 191 -71 458 71 0 0 chr17 22159941 22159997 -63278483 + U6 snRNA snRNA 1 56 -51 27 29 0 0 chr17 22159997 22160031 -63278449 + AT_rich Low_complexity Low_complexity 1 34 0 2309 95 0 0 chr17 22160380 22160674 -63277806 + AluSg SINE Alu 12 305 -5 22 0 0 0 chr17 22161410 22161432 -63277048 + AT_rich Low_complexity Low_complexity 1 22 0 21 57 0 0 chr17 22161556 22161591 -63276889 + AT_rich Low_complexity Low_complexity 1 35 0 2261 61 10 31 chr17 22162416 22162709 -63275771 + AluY SINE Alu 1 287 -24 822 196 0 0 chr17 22162769 22162902 -63275578 + AluJo SINE Alu 2 134 -178 2207 103 0 42 chr17 22162902 22163212 -63275268 + AluSx SINE Alu 1 297 -15 2211 121 0 6 chr17 22163215 22163529 -63274951 + AluSx SINE Alu 1 312 0 2171 96 3 63 chr17 22163602 22163934 -63274546 + AluSx SINE Alu 1 312 0 1128 135 0 0 chr17 22163934 22164097 -63274383 + AluY SINE Alu 133 295 -16 2373 81 7 0 chr17 22164100 22164395 -63274085 + AluY SINE Alu 3 299 -12 25 51 0 0 chr17 22164467 22164506 -63273974 + AT_rich Low_complexity Low_complexity 1 39 0 2434 67 0 7 chr17 22164727 22164896 -63273584 - AluY SINE Alu -15 296 128 180 0 0 0 chr17 22164896 22164916 -63273564 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2434 67 0 7 chr17 22164916 22165044 -63273436 - AluY SINE Alu -183 128 1 1930 148 0 25 chr17 22165214 22165532 -63272948 - AluJb SINE Alu -2 310 1 2427 67 0 3 chr17 22165667 22165964 -63272516 - AluY SINE Alu -15 296 1 474 154 0 55 chr17 22165964 22166055 -63272425 - MLT1A2 LTR MaLR -279 87 1 1835 129 87 0 chr17 22166110 22166397 -63272083 + AluSx SINE Alu 1 312 0 2088 120 0 3 chr17 22166916 22167208 -63271272 + AluSg SINE Alu 5 295 -15 2624 46 0 0 chr17 22167215 22167517 -63270963 + AluY SINE Alu 1 302 -9 1501 122 0 0 chr17 22167517 22167722 -63270758 + AluSg/x SINE Alu 106 310 0 874 160 0 77 chr17 22167963 22168144 -63270336 + FRAM SINE Alu 2 168 -8 1120 207 48 27 chr17 22168144 22168394 -63270086 - L1ME2 LINE L1 -52 6112 5854 2487 60 0 0 chr17 22168394 22168693 -63269787 + AluY SINE Alu 1 299 -12 1120 207 48 27 chr17 22168693 22168737 -63269743 - L1ME2 LINE L1 -310 5854 5812 2412 76 0 16 chr17 22168784 22169098 -63269382 + AluY SINE Alu 1 309 -2 2234 106 0 7 chr17 22169117 22169420 -63269060 + AluSx SINE Alu 1 301 -11 299 280 48 16 chr17 22169553 22169678 -63268802 - L1 LINE L1 -1130 5016 4888 549 255 107 79 chr17 22169788 22170213 -63268267 + L2 LINE L2 2688 3119 -153 1949 163 0 0 chr17 22170213 22170514 -63267966 + AluJb SINE Alu 3 303 -9 549 255 107 79 chr17 22170514 22170607 -63267873 + L2 LINE L2 3119 3208 -64 2178 109 3 0 chr17 22170781 22171088 -63267392 + AluSq SINE Alu 1 308 0 848 121 17 0 chr17 22171101 22171217 -63267263 + AluJb SINE Alu 1 118 -194 23 68 0 0 chr17 22171217 22171261 -63267219 + AT_rich Low_complexity Low_complexity 1 44 0 23 0 0 0 chr17 22171272 22171295 -63267185 + AT_rich Low_complexity Low_complexity 1 23 0 1872 116 8 19 chr17 22171325 22171593 -63266887 + AluSq SINE Alu 1 265 -48 468 267 54 64 chr17 22171613 22171777 -63266703 + L1ME LINE L1 5600 5760 -406 1561 185 17 31 chr17 22171777 22172069 -63266411 - AluJo SINE Alu -24 288 1 468 267 54 64 chr17 22172069 22172145 -63266335 + L1ME LINE L1 5760 5835 -331 2235 90 3 0 chr17 22172638 22172937 -63265543 - AluSp SINE Alu -13 300 1 593 70 0 0 chr17 22172975 22173046 -63265434 + tRNA-Gly-GGG tRNA tRNA 1 71 -3 922 133 7 0 chr17 22173056 22173199 -63265281 + AluSp/q SINE Alu 161 304 -9 2364 64 3 0 chr17 22173378 22173676 -63264804 + AluY SINE Alu 1 299 -12 2084 115 7 0 chr17 22174205 22174500 -63263980 - AluSx SINE Alu -7 305 9 2044 124 7 3 chr17 22174581 22174879 -63263601 - AluSp SINE Alu -14 299 1 487 206 43 85 chr17 22174924 22175045 -63263435 + L2 LINE L2 3179 3295 -18 1967 122 7 3 chr17 22175045 22175340 -63263140 + AluSq SINE Alu 1 296 -17 487 206 43 85 chr17 22175340 22175359 -63263121 + L2 LINE L2 3295 3313 0 1035 161 0 6 chr17 22175610 22175790 -63262690 - AluJo SINE Alu -11 301 123 21 71 0 0 chr17 22176066 22176108 -63262372 + AT_rich Low_complexity Low_complexity 1 42 0 872 159 0 0 chr17 22176137 22176269 -63262211 + FLAM_C SINE Alu 1 132 -1 1920 117 7 23 chr17 22176298 22176597 -63261883 + AluSx SINE Alu 1 294 -18 38 22 0 0 chr17 22176864 22176909 -63261571 + AT_rich Low_complexity Low_complexity 1 45 0 21 36 0 0 chr17 22177007 22177035 -63261445 + AT_rich Low_complexity Low_complexity 1 28 0 439 299 25 13 chr17 22177233 22177390 -63261090 + MER103 DNA DNA 2 160 -6 1989 74 0 44 chr17 22178324 22178643 -63259837 + AluSx SINE Alu 1 306 0 27 29 0 0 chr17 22179401 22179435 -63259045 + GC_rich Low_complexity Low_complexity 1 34 0 2137 125 3 0 chr17 22181189 22181493 -63256987 - AluSx SINE Alu -7 305 1 1990 129 0 3 chr17 22181495 22181789 -63256691 - AluSx SINE Alu -19 293 1 2281 53 0 7 chr17 22181801 22182108 -63256372 - AluY SINE Alu 0 305 1 2071 113 0 17 chr17 22182530 22182831 -63255649 - AluSx SINE Alu -16 296 1 1995 124 0 0 chr17 22183253 22183535 -63254945 + AluSq SINE Alu 1 282 -31 507 33 0 0 chr17 22183535 22183596 -63254884 + (CA)n Simple_repeat Simple_repeat 1 61 0 1020 147 6 0 chr17 22183596 22183752 -63254728 + AluSg/x SINE Alu 135 291 -21 2427 77 0 0 chr17 22184286 22184597 -63253883 + AluY SINE Alu 1 311 0 2403 75 0 0 chr17 22184611 22184917 -63253563 + AluY SINE Alu 1 306 -5 871 194 0 29 chr17 22184928 22185103 -63253377 + AluJo SINE Alu 1 170 -142 541 217 0 0 chr17 22185184 22185276 -63253204 + MER21B LTR ERV1 323 414 -449 414 78 0 0 chr17 22185276 22185327 -63253153 + AluSq/x SINE Alu 59 109 -203 198 317 32 49 chr17 22185327 22185450 -63253030 - L2 LINE L2 -189 3083 2963 510 217 9 17 chr17 22185751 22185866 -63252614 - MER21B LTR ERV1 -427 436 323 2156 129 0 0 chr17 22185956 22186266 -63252214 + AluSx SINE Alu 1 310 -2 368 281 128 20 chr17 22186360 22186563 -63251917 - LTR16A LTR ERVL -7 443 219 23 33 0 0 chr17 22186802 22186832 -63251648 + AT_rich Low_complexity Low_complexity 1 30 0 1829 128 4 0 chr17 22186955 22187228 -63251252 + AluSx SINE Alu 21 294 -18 306 133 0 0 chr17 22187378 22187423 -63251057 + AluSg/x SINE Alu 173 217 -83 965 115 0 38 chr17 22187423 22187580 -63250900 - AluSq/x SINE Alu -161 151 1 1221 209 59 14 chr17 22187585 22187872 -63250608 - AluJo SINE Alu -12 300 1 580 201 15 30 chr17 22187872 22188006 -63250474 + Charlie1 DNA MER1_type 2629 2760 -1 364 248 50 10 chr17 22188077 22188178 -63250302 + MIR SINE MIR 49 153 -109 2141 107 3 0 chr17 22188296 22188605 -63249875 + AluSq SINE Alu 1 310 -3 277 114 0 0 chr17 22189397 22189441 -63249039 + L1M4 LINE L1 3911 3954 -2192 1286 167 11 57 chr17 22189462 22189725 -63248755 + L1MC1 LINE L1 6083 6333 0 4150 163 17 30 chr17 22189725 22190169 -63248311 + L1PB4 LINE L1 5391 5822 -334 2145 98 0 10 chr17 22190169 22190465 -63248015 + AluSg SINE Alu 1 293 -17 4150 163 17 30 chr17 22190465 22190794 -63247686 + L1PB4 LINE L1 5822 6154 -2 922 298 54 17 chr17 22190834 22191310 -63247170 + L2 LINE L2 2702 3244 -69 203 172 52 0 chr17 22191314 22191372 -63247108 + (TA)n Simple_repeat Simple_repeat 2 62 0 512 191 109 18 chr17 22191376 22191486 -63246994 - FLAM_C SINE Alu -12 121 2 939 201 12 0 chr17 22191839 22192003 -63246477 - FRAM SINE Alu 0 166 1 1884 138 31 0 chr17 22192013 22192302 -63246178 - AluSg SINE Alu -10 300 3 308 125 0 0 chr17 22192347 22192387 -63246093 + Alu SINE Alu 2 41 -267 1645 130 47 14 chr17 22192642 22192918 -63245562 + AluSq SINE Alu 13 297 -16 2084 116 3 0 chr17 22192922 22193223 -63245257 + AluSx SINE Alu 1 302 -10 1123 125 0 0 chr17 22193223 22193383 -63245097 + AluSq SINE Alu 134 293 -20 742 188 0 8 chr17 22193383 22193511 -63244969 - FRAM SINE Alu -22 154 28 3347 146 15 58 chr17 22193515 22193684 -63244796 + MER49 LTR ERV1 341 516 -407 1731 88 0 92 chr17 22193684 22193784 -63244696 + AluSx SINE Alu 38 146 -166 1875 72 0 34 chr17 22193784 22194048 -63244432 + AluY SINE Alu 55 309 -2 1731 88 0 92 chr17 22194048 22194230 -63244250 + AluSx SINE Alu 146 294 -18 3347 146 15 58 chr17 22194230 22194613 -63243867 + MER49 LTR ERV1 516 867 -56 2307 40 34 10 chr17 22194613 22194911 -63243569 + AluY SINE Alu 1 305 -6 3347 146 15 58 chr17 22194911 22194966 -63243514 + MER49 LTR ERV1 867 923 0 2529 40 0 0 chr17 22194972 22195275 -63243205 + AluY SINE Alu 1 303 -8 1131 79 6 0 chr17 22195275 22195440 -63243040 + AluY SINE Alu 136 301 -10 704 278 163 10 chr17 22195447 22195742 -63242738 + L1ME3A LINE L1 5557 5896 -274 321 200 24 47 chr17 22195930 22196015 -63242465 + MLT1H1 LTR MaLR 396 478 -77 186 43 0 0 chr17 22196019 22196042 -63242438 + (TTAA)n Simple_repeat Simple_repeat 2 24 0 753 197 0 0 chr17 22196043 22196165 -63242315 - FLAM_C SINE Alu -20 123 2 2144 102 7 0 chr17 22196190 22196483 -63241997 + AluSx SINE Alu 1 295 -17 21 71 0 0 chr17 22196646 22196688 -63241792 + AT_rich Low_complexity Low_complexity 1 42 0 2361 77 0 0 chr17 22196774 22197073 -63241407 - AluY SINE Alu -12 299 1 26 30 0 0 chr17 22197188 22197221 -63241259 + AT_rich Low_complexity Low_complexity 1 33 0 2027 102 51 3 chr17 22197246 22197541 -63240939 - AluSp SINE Alu -4 309 1 1601 153 57 3 chr17 22197543 22197825 -63240655 - AluJo SINE Alu -13 299 3 933 218 9 18 chr17 22197887 22198116 -63240364 - AluJb SINE Alu -1 311 85 205 118 59 0 chr17 22198123 22198157 -63240323 + CT-rich Low_complexity Low_complexity 1 36 0 1579 160 22 41 chr17 22198157 22198657 -63239823 - AluJb SINE Alu 0 494 1 2219 86 6 19 chr17 22198669 22198984 -63239496 - AluSq SINE Alu -2 311 1 1967 143 0 0 chr17 22199113 22199407 -63239073 - AluSx SINE Alu -18 294 1 1211 177 110 0 chr17 22199439 22199749 -63238731 - Charlie1a DNA MER1_type -98 1357 1014 1893 142 7 0 chr17 22199765 22200067 -63238413 - AluSg SINE Alu -6 304 1 2306 76 0 13 chr17 22200100 22200415 -63238065 - AluY SINE Alu 0 311 1 306 50 0 0 chr17 22200417 22200457 -63238023 + (TG)n Simple_repeat Simple_repeat 1 40 0 894 162 107 54 chr17 22200457 22200798 -63237682 - LTR7 LTR ERV1 -48 402 1 3921 95 7 9 chr17 22200798 22201356 -63237124 - HERVH LTR ERV1 0 7713 7157 1442 161 28 0 chr17 22201349 22201603 -63236877 - HERVH LTR ERV1 -1697 6016 5756 * 3561 167 2 21 chr17 22201594 22202242 -63236238 - HERVH LTR ERV1 -2735 4616 3949 * 4010 148 0 5 chr17 22202228 22202868 -63235612 - HERVH LTR ERV1 -3720 3993 3357 13150 136 6 8 chr17 22202868 22204901 -63233579 - HERVH LTR ERV1 -4883 2830 801 1877 203 27 55 chr17 22204871 22205397 -63233083 - HERVH LTR ERV1 -7191 522 12 * 750 103 0 19 chr17 22205409 22205516 -63232964 - LTR7 LTR ERV1 0 450 346 2218 102 10 0 chr17 22205517 22205822 -63232658 - AluSp SINE Alu -5 308 1 1072 148 38 63 chr17 22205831 22205985 -63232495 - Charlie1a DNA MER1_type -1798 963 807 729 191 0 8 chr17 22205985 22206111 -63232369 + FLAM_C SINE Alu 1 125 -8 1819 123 47 36 chr17 22206119 22206420 -63232060 + AluSx SINE Alu 1 304 -8 1072 148 38 63 chr17 22206420 22206493 -63231987 - Charlie1a DNA MER1_type -1961 800 733 1604 144 67 3 chr17 22206498 22206782 -63231698 + AluJo SINE Alu 7 308 -4 2136 235 64 10 chr17 22206782 22207051 -63231429 - Charlie1a DNA MER1_type -2214 547 294 2094 111 3 3 chr17 22207051 22207348 -63231132 - AluSx SINE Alu -14 298 2 2136 235 64 10 chr17 22207348 22207597 -63230883 - Charlie1a DNA MER1_type -2467 294 1 1842 93 3 80 chr17 22208082 22208383 -63230097 + AluSx SINE Alu 1 278 -34 23 0 0 0 chr17 22208436 22208459 -63230021 + AT_rich Low_complexity Low_complexity 1 23 0 25 65 0 0 chr17 22208547 22208593 -63229887 + AT_rich Low_complexity Low_complexity 1 46 0 393 278 119 0 chr17 22209516 22209642 -63228838 + L2 LINE L2 3173 3313 0 334 164 134 30 chr17 22210201 22210268 -63228212 + MER5A DNA MER1_type 1 74 -115 786 108 18 0 chr17 22210270 22210381 -63228099 + FLAM_C SINE Alu 21 133 -10 188 232 313 30 chr17 22210388 22210487 -63227993 + MIR SINE MIR 136 262 0 2214 78 3 10 chr17 22211003 22211298 -63227182 - AluY SINE Alu -18 293 1 243 219 154 81 chr17 22211333 22211456 -63227024 + L2 LINE L2 3178 3309 -4 2291 86 3 0 chr17 22212761 22213062 -63225418 + AluSp SINE Alu 1 302 -11 1669 108 100 18 chr17 22213277 22213556 -63224924 - AluSq SINE Alu -11 302 1 2217 98 0 0 chr17 22213560 22213855 -63224625 - AluY SINE Alu -16 295 1 1918 149 0 3 chr17 22213858 22214154 -63224326 - AluSx SINE Alu -17 295 1 2112 111 3 7 chr17 22214159 22214466 -63224014 - AluSx SINE Alu -6 306 1 24 85 0 0 chr17 22215709 22215768 -63222712 + AT_rich Low_complexity Low_complexity 1 59 0 189 74 0 0 chr17 22215955 22215982 -63222498 + (TA)n Simple_repeat Simple_repeat 1 27 0 21 36 0 0 chr17 22216292 22216320 -63222160 + AT_rich Low_complexity Low_complexity 1 28 0 318 272 179 19 chr17 22217261 22217423 -63221057 - MIR SINE MIR -7 255 68 326 353 49 0 chr17 22217443 22217565 -63220915 + L1ME LINE L1 5577 5704 -417 219 300 67 50 chr17 22217797 22217917 -63220563 - MIR3 SINE MIR -3 205 84 2213 92 3 7 chr17 22217965 22218269 -63220211 - AluSp SINE Alu -10 303 1 1381 279 76 56 chr17 22218279 22218347 -63220133 - L1MEc LINE L1 -5348 1048 983 1847 114 42 39 chr17 22218347 22218655 -63219825 - AluSg SINE Alu -1 309 1 1381 279 76 56 chr17 22218655 22218816 -63219664 - L1MEc LINE L1 -5413 983 827 2133 107 0 3 chr17 22218816 22219115 -63219365 - AluSq SINE Alu -15 298 1 1381 279 76 56 chr17 22219115 22219599 -63218881 - L1MEc LINE L1 -5569 827 314 1985 81 77 0 chr17 22219599 22219871 -63218609 - AluSq SINE Alu -20 293 1 1381 279 76 56 chr17 22219871 22219928 -63218552 - L1MEc LINE L1 -6082 314 260 256 286 12 0 chr17 22219937 22220021 -63218459 - L1MEc LINE L1 -6235 161 77 1985 131 7 0 chr17 22220996 22221293 -63217187 + AluSx SINE Alu 1 299 -13 183 359 21 47 chr17 22222264 22222456 -63216024 + L2 LINE L2 2490 2676 -638 2449 74 13 0 chr17 22222507 22222816 -63215664 + AluSp SINE Alu 1 313 0 2082 107 17 33 chr17 22223083 22223225 -63215255 + AluSx SINE Alu 1 144 -168 1914 146 0 7 chr17 22223225 22223519 -63214961 + AluSx SINE Alu 21 312 0 2082 107 17 33 chr17 22223519 22223675 -63214805 + AluSx SINE Alu 144 294 -18 218 264 0 143 chr17 22223859 22223920 -63214560 + MIR SINE MIR 69 114 -94 1834 138 6 44 chr17 22223920 22224104 -63214376 - AluSx SINE Alu -4 308 139 2251 94 3 3 chr17 22224104 22224402 -63214078 - AluSg SINE Alu -12 298 1 1834 138 6 44 chr17 22224402 22224535 -63213945 - AluSx SINE Alu -173 139 3 218 264 0 143 chr17 22224535 22224564 -63213916 + MIR SINE MIR 114 146 -62 496 316 81 60 chr17 22224816 22224952 -63213528 - L2 LINE L2 -4 3309 3177 1655 178 13 10 chr17 22224952 22225250 -63213230 - AluJo SINE Alu -13 299 1 496 316 81 60 chr17 22225250 22225319 -63213161 - L2 LINE L2 -136 3177 3111 1603 176 76 0 chr17 22225319 22225608 -63212872 + AluJb SINE Alu 1 311 -1 496 316 81 60 chr17 22225608 22225885 -63212595 - L2 LINE L2 -202 3111 2816 273 294 101 0 chr17 22226192 22226301 -63212179 + L1MC5 LINE L1 7323 7442 -519 336 294 109 0 chr17 22226356 22226448 -63212032 + L2 LINE L2 3171 3272 0 1228 252 136 31 chr17 22226641 22227364 -63211116 + L2 LINE L2 2509 3313 0 2289 84 0 7 chr17 22227606 22227930 -63210550 + AluY SINE Alu 1 311 0 2328 96 0 3 chr17 22227933 22228245 -63210235 + AluY SINE Alu 1 311 0 675 270 0 38 chr17 22228426 22228585 -63209895 - AluJb SINE Alu -18 294 142 1408 117 132 49 chr17 22228617 22228883 -63209597 + AluSx SINE Alu 15 302 -10 2428 91 0 7 chr17 22228889 22229198 -63209282 + AluSg SINE Alu 1 307 -3 1382 110 57 24 chr17 22229208 22229417 -63209063 + AluSx SINE Alu 1 216 -96 1077 114 67 0 chr17 22229421 22229570 -63208910 - AluSc SINE Alu -150 159 1 3393 45 2 8 chr17 22229876 22230273 -63208207 - L1PA6 LINE L1 -2 6152 5758 34 0 0 22 chr17 22230327 22230352 -63208128 + AT_rich Low_complexity Low_complexity 1 26 -18 2042 156 3 0 chr17 22230352 22230659 -63207821 + AluSx SINE Alu 1 308 -4 34 0 0 22 chr17 22230659 22230678 -63207802 + AT_rich Low_complexity Low_complexity 26 44 0 256 242 70 39 chr17 22231314 22231442 -63207038 + L1MC4a LINE L1 4626 4757 -1389 2309 105 0 40 chr17 22231511 22231836 -63206644 + AluSx SINE Alu 1 312 0 366 309 50 7 chr17 22231944 22232083 -63206397 + L1MC4a LINE L1 5263 5407 -757 2213 88 35 0 chr17 22232122 22232406 -63206074 - AluSc SINE Alu -15 294 1 854 147 0 0 chr17 22232504 22232620 -63205860 + FLAM_C SINE Alu 1 116 -27 26 50 0 0 chr17 22232620 22232660 -63205820 + AT_rich Low_complexity Low_complexity 1 40 0 523 169 0 0 chr17 22233078 22233155 -63205325 + AluS SINE Alu 2 78 -235 853 113 65 0 chr17 22233370 22233494 -63204986 - AluSq/x SINE Alu -178 134 3 2196 119 0 0 chr17 22233570 22233873 -63204607 + AluY SINE Alu 2 304 -7 2356 84 3 3 chr17 22234019 22234328 -63204152 - AluSx SINE Alu -3 309 1 2389 78 0 3 chr17 22234481 22234776 -63203704 - AluY SINE Alu -17 294 1 598 204 144 0 chr17 22235099 22235231 -63203249 - MIR SINE MIR -110 152 2 30 59 0 0 chr17 22235256 22235307 -63203173 + AT_rich Low_complexity Low_complexity 1 51 0 638 235 0 0 chr17 22235706 22235825 -63202655 - AluJb SINE Alu -52 260 142 1745 154 0 0 chr17 22235859 22236119 -63202361 + AluSx SINE Alu 28 287 -25 180 0 0 0 chr17 22236123 22236143 -63202337 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 521 268 62 64 chr17 22236446 22236753 -63201727 + L1MC4a LINE L1 5598 5777 -407 299 177 32 16 chr17 22236747 22236809 -63201671 + L1MB7 LINE L1 3606 3668 -2478 * 688 170 0 111 chr17 22236811 22236982 -63201498 + L1M4 LINE L1 4716 4867 -1279 2854 216 93 19 chr17 22237005 22237787 -63200693 + L1MB7 LINE L1 3723 4562 -1584 1461 98 0 10 chr17 22237789 22237983 -63200497 + AluSq SINE Alu 1 192 -121 1477 202 15 4 chr17 22238016 22238311 -63200169 + AluJb SINE Alu 12 309 0 558 182 45 8 chr17 22238335 22238467 -63200013 + L1MB7 LINE L1 5196 5332 -814 779 142 0 0 chr17 22238468 22238574 -63199906 + FLAM_C SINE Alu 2 107 -36 2298 105 3 0 chr17 22238579 22238884 -63199596 + AluSq SINE Alu 1 306 -7 2142 123 0 16 chr17 22238888 22239204 -63199276 + AluSx SINE Alu 1 311 -1 3153 169 100 42 chr17 22239205 22239545 -63198935 + L1MB7 LINE L1 5318 5637 -547 2194 98 24 10 chr17 22239545 22239842 -63198638 + AluSx SINE Alu 1 301 -11 3153 169 100 42 chr17 22239842 22240310 -63198170 + L1MB7 LINE L1 5637 6173 -11 986 209 44 29 chr17 22240315 22240588 -63197892 + L1ME3A LINE L1 5894 6170 0 2245 102 0 37 chr17 22240647 22240969 -63197511 + AluSg SINE Alu 1 310 0 241 297 145 36 chr17 22241228 22241366 -63197114 + MIR SINE MIR 59 211 -51 830 129 0 16 chr17 22241462 22241586 -63196894 + AluJo/FLAM SINE Alu 12 133 -179 866 177 186 53 chr17 22241589 22241672 -63196808 + AluJo SINE Alu 44 115 -197 2146 104 3 0 chr17 22241672 22241959 -63196521 - AluSg SINE Alu -22 288 1 866 177 186 53 chr17 22241959 22242101 -63196379 + AluJo SINE Alu 115 299 -13 2298 119 0 0 chr17 22242330 22242641 -63195839 - AluSx SINE Alu -1 311 1 2214 112 7 7 chr17 22243119 22243422 -63195058 + AluSx SINE Alu 1 303 -9 290 321 113 12 chr17 22243574 22243742 -63194738 - L1MC/D LINE L1 -2116 5692 5508 25 31 0 0 chr17 22243793 22243825 -63194655 + AT_rich Low_complexity Low_complexity 1 32 0 2325 108 0 0 chr17 22243962 22244269 -63194211 - AluSq SINE Alu -6 307 1 295 276 204 0 chr17 22244286 22244384 -63194096 + L2 LINE L2 3151 3268 -4 24 0 0 0 chr17 22244860 22244884 -63193596 + AT_rich Low_complexity Low_complexity 1 24 0 2357 84 3 0 chr17 22244884 22245171 -63193309 - AluSp SINE Alu -25 288 1 1036 156 0 0 chr17 22245317 22245471 -63193009 - AluJb SINE Alu -31 281 128 472 273 30 30 chr17 22245516 22245681 -63192799 - MIR SINE MIR 0 262 98 1893 152 4 0 chr17 22245683 22245960 -63192520 + AluSx SINE Alu 3 280 -32 261 0 0 0 chr17 22245960 22245989 -63192491 + (CAAT)n Simple_repeat Simple_repeat 4 32 0 5968 84 63 1 chr17 22246001 22246859 -63191621 - Tigger3b DNA MER2_type -46 1185 275 245 143 0 0 chr17 22246861 22246896 -63191584 - Tigger3b DNA MER2_type -1132 99 65 227 295 0 0 chr17 22246896 22246991 -63191489 + T-rich Low_complexity Low_complexity 1 95 0 380 194 83 0 chr17 22247007 22247079 -63191401 - Tigger3b DNA MER2_type -1153 78 1 2441 99 0 0 chr17 22248170 22248482 -63189998 + AluSx SINE Alu 1 312 0 562 283 45 7 chr17 22248673 22248840 -63189640 + MIR3 SINE MIR 18 186 -39 314 328 8 33 chr17 22248812 22248934 -63189546 + MER5A DNA MER1_type 21 139 -50 * 1553 108 0 9 chr17 22248956 22249168 -63189312 - AluSq SINE Alu -94 219 10 2266 110 0 0 chr17 22249188 22249487 -63188993 - AluSx SINE Alu -13 299 1 184 235 24 129 chr17 22249488 22249573 -63188907 - MER5A DNA MER1_type -113 76 1 1891 131 16 20 chr17 22249677 22249982 -63188498 - AluJb SINE Alu -8 304 1 209 267 279 0 chr17 22250556 22250642 -63187838 + L2 LINE L2 3155 3264 -8 520 308 121 21 chr17 22253208 22253581 -63184899 + L1ME LINE L1 5305 5714 -407 425 272 103 0 chr17 22253663 22253799 -63184681 + L2 LINE L2 1164 1313 -2001 4614 161 28 28 chr17 22253807 22253845 -63184635 + MER21B LTR ERV1 1 38 -825 1674 170 41 0 chr17 22253845 22254139 -63184341 - AluJo SINE Alu -6 306 1 4614 161 28 28 chr17 22254139 22254914 -63183566 + MER21B LTR ERV1 37 814 -49 969 239 97 10 chr17 22254962 22255271 -63183209 + L2 LINE L2 1331 1666 -1648 1965 83 11 23 chr17 22255338 22255627 -63182853 + AluSc SINE Alu 19 304 0 404 196 9 37 chr17 22255630 22255737 -63182743 + L2 LINE L2 2453 2556 -758 252 259 35 0 chr17 22255977 22256035 -63182445 - MIR SINE MIR -74 134 75 320 197 122 48 chr17 22256914 22257061 -63181419 + MER112 DNA MER1_type 6 163 -97 309 219 10 62 chr17 22257109 22257205 -63181275 - L1MC4 LINE L1 -1338 6704 6614 198 0 0 0 chr17 22257205 22257227 -63181253 + (TA)n Simple_repeat Simple_repeat 2 23 0 * 216 0 0 0 chr17 22257226 22257250 -63181230 + (T)n Simple_repeat Simple_repeat 1 24 0 812 270 108 0 chr17 22257310 22257532 -63180948 + MIR SINE MIR 6 251 -11 189 0 0 0 chr17 22257608 22257629 -63180851 + (T)n Simple_repeat Simple_repeat 1 21 0 1937 117 24 0 chr17 22258626 22258917 -63179563 + HSMAR2 DNA Mariner 4 301 -1001 272 28 0 0 chr17 22258915 22258951 -63179529 + AluY SINE Alu 261 296 -5 * 1285 264 77 39 chr17 22259813 22260437 -63178043 + L1ME LINE L1 938 1555 -4988 2362 81 7 7 chr17 22260440 22260747 -63177733 + AluSc SINE Alu 1 307 -2 417 218 38 97 chr17 22260824 22260971 -63177509 + L1ME LINE L1 2262 2416 -4124 1497 104 5 10 chr17 22260971 22261172 -63177308 + AluSx SINE Alu 1 200 -112 194 61 0 30 chr17 22261173 22261206 -63177274 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 417 218 38 97 chr17 22261206 22261249 -63177231 + L1ME LINE L1 2416 2460 -4080 9198 48 11 165 chr17 22261249 22262863 -63175617 + SVA Other Other 19 1384 -2 417 218 38 97 chr17 22262863 22262958 -63175522 + L1ME LINE L1 2460 2533 -4007 21 57 0 0 chr17 22262968 22263003 -63175477 + AT_rich Low_complexity Low_complexity 1 35 0 3722 222 78 44 chr17 22263039 22263132 -63175348 + L1ME LINE L1 2565 2653 -3887 2067 117 3 3 chr17 22263132 22263456 -63175024 + AluSq SINE Alu 1 324 0 3722 222 78 44 chr17 22263456 22264701 -63173779 + L1ME LINE L1 2653 3910 -2630 2059 147 0 3 chr17 22264701 22265000 -63173480 + AluSx SINE Alu 2 299 -13 3722 222 78 44 chr17 22265000 22265144 -63173336 + L1ME LINE L1 3910 4048 -2492 1402 213 67 53 chr17 22265137 22265438 -63173042 + L1ME LINE L1 5115 5425 -1115 * 2333 88 0 30 chr17 22265438 22265743 -63172737 - AluY SINE Alu -15 296 1 1402 213 67 53 chr17 22265743 22265877 -63172603 + L1ME LINE L1 5425 5556 -984 327 247 118 17 chr17 22265879 22265892 -63172588 + L1ME1 LINE L1 5928 5938 -246 2354 100 0 7 chr17 22265892 22266202 -63172278 + AluSx SINE Alu 5 312 0 327 247 118 17 chr17 22266202 22266390 -63172090 + L1ME1 LINE L1 5938 6152 -32 2056 109 0 0 chr17 22266530 22266795 -63171685 + AluSg SINE Alu 26 290 -20 489 264 44 13 chr17 22266944 22267103 -63171377 - MER46C DNA MER2_type -12 326 163 307 314 69 32 chr17 22267134 22267481 -63170999 + L1MEd LINE L1 541 900 -5219 741 189 0 15 chr17 22267510 22267642 -63170838 - FLAM_A SINE Alu -3 130 1 1397 104 6 0 chr17 22267674 22267856 -63170624 + AluSq SINE Alu 2 184 -129 225 94 0 0 chr17 22267859 22267891 -63170589 + (GGGA)n Simple_repeat Simple_repeat 3 34 0 303 274 25 83 chr17 22268131 22268212 -63170268 + MIR SINE MIR 70 139 -123 2336 56 25 3 chr17 22268212 22268496 -63169984 + AluY SINE Alu 3 292 -19 303 274 25 83 chr17 22268496 22268571 -63169909 + MIR SINE MIR 139 217 -45 29 0 0 0 chr17 22268593 22268622 -63169858 + AT_rich Low_complexity Low_complexity 1 29 0 2227 105 10 13 chr17 22269790 22270103 -63168377 - AluSq SINE Alu -1 312 1 612 285 97 31 chr17 22270164 22270483 -63167997 + L1ME LINE L1 5772 6111 -404 26 64 0 0 chr17 22270538 22270585 -63167895 + AT_rich Low_complexity Low_complexity 1 47 0 281 162 73 0 chr17 22270847 22270915 -63167565 - L1MD2 LINE L1 0 6359 6287 855 135 8 0 chr17 22270915 22271041 -63167439 + AluJb SINE Alu 1 127 -185 3383 168 91 15 chr17 22271041 22271694 -63166786 - L1MD2 LINE L1 -60 6299 5697 1903 114 40 4 chr17 22271694 22272004 -63166476 + AluSq SINE Alu 1 320 0 2013 128 9 40 chr17 22272010 22272331 -63166149 + AluJb SINE Alu 1 311 -1 3383 168 91 15 chr17 22272331 22272395 -63166085 - L1MD2 LINE L1 -666 5693 5519 346 303 70 35 chr17 22272688 22272786 -63165694 - L1ME4a LINE L1 -205 5916 5823 1841 184 0 0 chr17 22272786 22273091 -63165389 + AluJo SINE Alu 3 307 -5 346 303 70 35 chr17 22273091 22273220 -63165260 - L1ME4a LINE L1 -298 5823 5681 390 129 0 0 chr17 22273220 22273282 -63165198 + (CA)n Simple_repeat Simple_repeat 2 63 0 335 288 124 20 chr17 22273283 22273594 -63164886 - L1ME4a LINE L1 -586 5580 5335 1165 125 0 0 chr17 22274162 22274330 -63164150 - AluSg/x SINE Alu -8 304 137 2166 120 0 3 chr17 22274563 22274872 -63163608 + AluSq SINE Alu 1 308 -5 2061 109 0 16 chr17 22275560 22275872 -63162608 + AluSg SINE Alu 1 307 -3 432 277 52 105 chr17 22276744 22276984 -63161496 - MIR SINE MIR 0 262 37 329 372 18 6 chr17 22277133 22277297 -63161183 + L2 LINE L2 2429 2594 -720 361 364 25 0 chr17 22277315 22277433 -63161047 + L2 LINE L2 3134 3254 -18 449 258 86 25 chr17 22277589 22277752 -63160728 - MIR3 SINE MIR -1 207 35 23 33 0 0 chr17 22278251 22278281 -63160199 + AT_rich Low_complexity Low_complexity 1 30 0 2179 107 3 0 chr17 22278551 22278859 -63159621 + AluSq SINE Alu 1 309 -4 2348 72 0 3 chr17 22278869 22279173 -63159307 + AluY SINE Alu 1 303 -8 221 238 0 0 chr17 22279558 22279600 -63158880 - L2 LINE L2 -255 3058 3017 769 287 36 9 chr17 22279640 22279863 -63158617 + MIR SINE MIR 34 262 0 2100 99 3 7 chr17 22280012 22280315 -63158165 + AluSx SINE Alu 1 302 -10 307 272 161 12 chr17 22280643 22280805 -63157675 - L2 LINE L2 -10 3303 3118 853 277 127 17 chr17 22280882 22281293 -63157187 + L2 LINE L2 2110 2565 -749 2088 135 0 0 chr17 22281491 22281802 -63156678 + AluSx SINE Alu 1 311 -1 1245 156 204 0 chr17 22281851 22282101 -63156379 - AluJo SINE Alu -1 301 1 2158 111 0 0 chr17 22282177 22282475 -63156005 + AluSx SINE Alu 1 298 -14 565 271 164 14 chr17 22282599 22282784 -63155696 - L1ME LINE L1 -376 5794 5638 1887 111 56 0 chr17 22282784 22283072 -63155408 + AluSx SINE Alu 1 304 -8 565 271 164 14 chr17 22283072 22283306 -63155174 - L1ME LINE L1 -532 5638 5312 2316 57 0 0 chr17 22283397 22283704 -63154776 - AluY SINE Alu 0 308 2 971 157 65 109 chr17 22283892 22283939 -63154541 + MER58A DNA MER1_type 1 49 -2371 1645 142 38 0 chr17 22283939 22284200 -63154280 - AluSx SINE Alu -11 301 31 971 157 65 109 chr17 22284200 22284382 -63154098 + MER58A DNA MER1_type 49 220 -4 196 359 39 10 chr17 22284589 22284692 -63153788 + L2 LINE L2 2963 3068 -245 963 257 59 64 chr17 22284693 22284872 -63153608 - L2 LINE L2 -711 2603 2425 2005 100 45 0 chr17 22284872 22285163 -63153317 + AluSq SINE Alu 1 304 -9 963 257 59 64 chr17 22285163 22285264 -63153216 - L2 LINE L2 -889 2425 2325 1295 72 169 0 chr17 22285264 22285459 -63153021 - MER30 DNA MER1_type -1 229 2 963 257 59 64 chr17 22285459 22285581 -63152899 - L2 LINE L2 -989 2325 2202 696 270 155 60 chr17 22285592 22285657 -63152823 + L2 LINE L2 2627 2684 -629 1235 163 139 4 chr17 22285657 22285915 -63152565 - AluJo SINE Alu -15 297 5 696 270 155 60 chr17 22285915 22285976 -63152504 + L2 LINE L2 2684 2738 -575 1481 202 27 0 chr17 22285976 22286268 -63152212 - AluJo SINE Alu -11 301 2 696 270 155 60 chr17 22286268 22286751 -63151729 + L2 LINE L2 2738 3308 -5 225 287 233 13 chr17 22286991 22287141 -63151339 - MIR3 SINE MIR -6 202 20 2015 98 20 20 chr17 22287155 22287460 -63151020 + AluSq SINE Alu 1 305 -8 2262 55 10 0 chr17 22287478 22287767 -63150713 - AluSp SINE Alu -21 292 1 186 263 105 0 chr17 22289672 22289729 -63148751 - MIR SINE MIR -64 144 82 3447 89 126 18 chr17 22289731 22290302 -63148178 - LTR10E LTR ERV1 0 633 1 1933 100 38 0 chr17 22290429 22290718 -63147762 + AluSx SINE Alu 1 300 -12 272 295 241 6 chr17 22290769 22290935 -63147545 - MIR SINE MIR -5 257 53 526 271 42 92 chr17 22291671 22291933 -63146547 - MIR SINE MIR -1 261 13 2316 80 3 0 chr17 22292357 22292659 -63145821 - AluSq SINE Alu -10 303 1 1835 126 39 18 chr17 22292833 22293119 -63145361 - AluSx SINE Alu -20 292 1 349 291 26 56 chr17 22293151 22293396 -63145084 + L1MEc LINE L1 1260 1511 -4885 1779 114 96 0 chr17 22293396 22293667 -63144813 + AluSx SINE Alu 1 297 -15 2405 53 0 3 chr17 22293669 22293971 -63144509 + AluY SINE Alu 1 301 -10 349 291 26 56 chr17 22293971 22294062 -63144418 + L1MEc LINE L1 1512 1589 -4807 1441 188 0 4 chr17 22294076 22294355 -63144125 + AluJb SINE Alu 30 307 0 287 196 98 18 chr17 22294355 22294439 -63144041 + L1MEc LINE L1 1587 1684 -4712 2087 113 0 10 chr17 22294439 22294741 -63143739 + AluSq SINE Alu 1 299 -14 287 196 98 18 chr17 22294741 22294768 -63143712 + L1MEc LINE L1 1684 1707 -4689 1979 127 0 10 chr17 22294779 22295078 -63143402 + AluSx SINE Alu 1 296 -16 1697 63 0 5 chr17 22295081 22295303 -63143177 + L1MA1 LINE L1 6077 6297 -5 27 0 0 0 chr17 22295306 22295333 -63143147 + AT_rich Low_complexity Low_complexity 1 27 0 1911 210 94 74 chr17 22295545 22295704 -63142776 - MER77 LTR ERV1 -4 601 447 1923 111 11 4 chr17 22295704 22295984 -63142496 + AluY SINE Alu 1 282 -29 1911 210 94 74 chr17 22295984 22296399 -63142081 - MER77 LTR ERV1 -158 447 41 645 290 47 0 chr17 22296431 22296600 -63141880 - HERV16 LTR ERVL -2127 2869 2693 2210 92 0 0 chr17 22296612 22296907 -63141573 - AluSx SINE Alu -13 299 5 2007 84 20 37 chr17 22296912 22297210 -63141270 - AluSx SINE Alu -14 298 6 436 186 9 69 chr17 22297227 22297339 -63141141 + MER33 DNA MER1_type 1 99 -97 1254 99 0 0 chr17 22297418 22297589 -63140891 - AluSc SINE Alu -6 303 133 2419 62 0 3 chr17 22297589 22297894 -63140586 - AluY SINE Alu -7 304 1 635 190 141 0 chr17 22297902 22298065 -63140415 - LTR10D LTR ERV1 -327 186 1 3524 143 76 7 chr17 22298208 22298802 -63139678 + MER41B LTR ERV1 1 635 0 586 111 0 0 chr17 22299704 22299785 -63138695 - AluSg SINE Alu -228 82 2 372 258 11 0 chr17 22300035 22300053 -63138427 - MIR3 SINE MIR -2 206 190 2082 121 14 0 chr17 22300053 22300350 -63138130 + AluSx SINE Alu 1 301 -11 372 258 11 0 chr17 22300350 22300420 -63138060 - MIR3 SINE MIR -18 190 117 598 251 37 60 chr17 22300812 22301027 -63137453 - MIR SINE MIR 0 262 53 2044 92 21 7 chr17 22301037 22301318 -63137162 + AluSx SINE Alu 1 285 -27 238 269 75 21 chr17 22301334 22301427 -63137053 + L2 LINE L2 2957 3054 -218 437 272 133 15 chr17 22301482 22301554 -63136926 - MIR SINE MIR -6 256 194 1899 116 3 3 chr17 22301554 22301838 -63136642 - AluSx SINE Alu -13 299 16 437 272 133 15 chr17 22301838 22301960 -63136520 - MIR SINE MIR -68 194 39 955 254 9 18 chr17 22301972 22302189 -63136291 + MER58A DNA MER1_type 1 215 -9 995 207 91 11 chr17 22302995 22303270 -63135210 - LTR65 LTR ERV1 -7 662 366 2048 133 0 0 chr17 22303270 22303571 -63134909 - AluSx SINE Alu -11 301 1 814 184 11 35 chr17 22303571 22303745 -63134735 - L1MB2 LINE L1 -344 5827 5658 642 133 0 0 chr17 22303745 22303850 -63134630 - AluSg/x SINE Alu 0 310 206 572 167 127 7 chr17 22303927 22304077 -63134403 + FAM SINE Alu 6 173 -12 1724 127 14 0 chr17 22304088 22304390 -63134090 + AluJo SINE Alu 6 311 0 1543 149 48 39 chr17 22304433 22304700 -63133780 - AluJo SINE Alu 0 407 134 2477 40 7 3 chr17 22304700 22305004 -63133476 - AluY SINE Alu -6 305 1 1543 149 48 39 chr17 22305004 22305140 -63133340 - AluJo SINE Alu -273 134 1 2216 98 3 0 chr17 22305184 22305491 -63132989 - AluSg SINE Alu -2 308 1 2336 85 0 0 chr17 22305756 22306063 -63132417 - AluSg SINE Alu -3 307 1 2332 78 0 3 chr17 22306072 22306378 -63132102 - AluSq SINE Alu -8 305 1 331 136 0 159 chr17 22306521 22306573 -63131907 - LTR67 LTR ERVL 0 557 523 2304 65 0 14 chr17 22306573 22306867 -63131613 - AluY SINE Alu -21 290 1 331 136 0 159 chr17 22306867 22306902 -63131578 - LTR67 LTR ERVL -34 523 484 2449 150 70 0 chr17 22306933 22307333 -63131147 - MSTC LTR MaLR 0 428 1 35 54 0 0 chr17 22307362 22307418 -63131062 + AT_rich Low_complexity Low_complexity 1 56 0 273 285 89 76 chr17 22307931 22308071 -63130409 - L1M4 LINE L1 -2050 4096 3959 2141 107 0 0 chr17 22308071 22308362 -63130118 - AluSx SINE Alu -21 291 1 273 285 89 76 chr17 22308362 22308512 -63129968 - L1M4 LINE L1 -2187 3959 3802 370 148 8 205 chr17 22308522 22308644 -63129836 - L2 LINE L2 -2 3311 3214 619 108 0 0 chr17 22308644 22308727 -63129753 + 5S rRNA rRNA 7 89 -32 4528 253 116 35 chr17 22308731 22308862 -63129618 - L2 LINE L2 -90 3223 3104 2174 108 0 7 chr17 22308862 22309169 -63129311 - AluSx SINE Alu -7 305 1 4528 253 116 35 chr17 22309169 22309911 -63128569 - L2 LINE L2 -209 3104 2424 2291 77 0 3 chr17 22309911 22310210 -63128270 + AluY SINE Alu 1 298 -13 4528 253 116 35 chr17 22310210 22310314 -63128166 - L2 LINE L2 -889 2424 2330 2052 113 7 0 chr17 22310314 22310607 -63127873 + AluSg SINE Alu 1 295 -15 4528 253 116 35 chr17 22310607 22310734 -63127746 - L2 LINE L2 -983 2330 2215 1817 142 17 0 chr17 22310734 22311023 -63127457 - AluJb SINE Alu -18 294 1 4528 253 116 35 chr17 22311023 22311823 -63126657 - L2 LINE L2 -1098 2215 1152 2158 109 0 0 chr17 22311885 22312187 -63126293 + AluSx SINE Alu 1 302 -10 2180 99 0 13 chr17 22312286 22312465 -63126015 - AluY SINE Alu -1 310 135 2155 81 3 36 chr17 22312465 22312773 -63125707 - AluSq SINE Alu -15 298 1 2180 99 0 13 chr17 22312773 22312907 -63125573 - AluY SINE Alu -176 135 1 798 126 0 70 chr17 22313028 22313171 -63125309 - FLAM_C SINE Alu 0 133 1 2020 122 0 0 chr17 22313196 22313483 -63124997 + AluSx SINE Alu 5 291 -21 2066 99 7 3 chr17 22313513 22313797 -63124683 - AluSg SINE Alu -17 293 9 300 310 0 11 chr17 22313865 22313952 -63124528 - L1M4 LINE L1 -3319 2827 2742 2093 114 0 7 chr17 22314066 22314374 -63124106 + AluSg SINE Alu 1 306 -4 372 287 23 8 chr17 22314768 22314897 -63123583 - MER94 DNA DNA 0 134 4 1797 162 3 0 chr17 22314926 22315222 -63123258 + AluJo SINE Alu 1 297 -15 1006 84 0 28 chr17 22315222 22315365 -63123115 + AluSg/x SINE Alu 147 285 -27 252 0 0 0 chr17 22315369 22315397 -63123083 + (TAAAA)n Simple_repeat Simple_repeat 2 29 0 2228 102 7 0 chr17 22315538 22315843 -63122637 + AluSx SINE Alu 2 308 -4 1905 96 100 0 chr17 22316057 22316328 -63122152 + AluSx SINE Alu 1 298 -14 821 263 82 68 chr17 22316329 22316464 -63122016 + HAL1b LINE L1 245 377 -971 2302 88 0 0 chr17 22316464 22316770 -63121710 - AluY SINE Alu -5 306 1 821 263 82 68 chr17 22316770 22316989 -63121491 + HAL1b LINE L1 377 591 -757 1682 166 0 7 chr17 22316989 22317273 -63121207 - AluJo SINE Alu -30 282 1 821 263 82 68 chr17 22317273 22317477 -63121003 + HAL1b LINE L1 591 812 -536 232 189 14 81 chr17 22318028 22318102 -63120378 + L1MEc LINE L1 2449 2517 -3879 437 296 90 86 chr17 22318256 22318735 -63119745 + L1MEc LINE L1 3237 3697 -2518 573 132 19 28 chr17 22318735 22318841 -63119639 - FLAM_C SINE Alu -1 142 38 276 297 27 27 chr17 22318843 22318991 -63119489 + L1MEc LINE L1 3703 3850 -2365 687 180 41 67 chr17 22319254 22319448 -63119032 - MER20 DNA MER1_type -29 190 2 714 181 32 64 chr17 22319865 22320053 -63118427 - MER5A DNA MER1_type -3 186 5 23 33 0 0 chr17 22320385 22320415 -63118065 + GC_rich Low_complexity Low_complexity 1 30 0 345 276 106 54 chr17 22321773 22322672 -63115808 - L1MEc LINE L1 -2145 4395 3439 409 283 116 17 chr17 22322818 22322991 -63115489 - L1MEc LINE L1 -4583 2138 1949 329 240 40 40 chr17 22323013 22323028 -63115452 - L1MEc LINE L1 -6008 522 508 24 32 0 0 chr17 22323028 22323059 -63115421 + AT_rich Low_complexity Low_complexity 1 31 0 329 240 40 40 chr17 22323059 22323113 -63115367 - L1MEc LINE L1 -6021 509 423 252 257 88 59 chr17 22323185 22323647 -63114833 - L1MDa LINE L1 -3476 3064 2580 3756 156 46 46 chr17 22323647 22324361 -63114119 - L1MB2 LINE L1 -8 6163 5450 252 257 88 59 chr17 22324361 22324445 -63114035 - L1MDa LINE L1 -3960 2580 2500 1923 166 0 3 chr17 22324445 22324753 -63113727 - AluSx SINE Alu -5 307 1 1406 231 78 5 chr17 22324754 22325152 -63113328 - L1ME3A LINE L1 -343 5827 5401 652 260 113 71 chr17 22325452 22325715 -63112765 - HAL1 LINE L1 -838 1669 1379 2131 118 10 3 chr17 22325715 22326003 -63112477 - AluSx SINE Alu -20 292 3 652 260 113 71 chr17 22326003 22326174 -63112306 - HAL1 LINE L1 -1128 1379 1217 530 191 48 40 chr17 22326229 22326355 -63112125 - FRAM SINE Alu 0 176 50 2395 77 0 0 chr17 22326535 22326834 -63111646 - AluY SINE Alu -12 299 1 2255 85 3 26 chr17 22326880 22327186 -63111294 + AluY SINE Alu 1 299 -12 4021 127 83 40 chr17 22327242 22328509 -63109971 + LTR12 LTR ERV1 6 714 0 284 297 41 32 chr17 22328517 22328736 -63109744 - L1MC4a LINE L1 -1747 6061 5841 801 223 0 0 chr17 22329347 22329504 -63108976 - FRAM SINE Alu -18 158 2 2897 156 51 18 chr17 22329529 22330043 -63108437 - MER68 LTR ERV1 0 562 32 661 223 9 0 chr17 22330046 22330158 -63108322 + FLAM_C SINE Alu 2 114 -29 519 17 0 0 chr17 22330158 22330218 -63108262 + (TTTA)n Simple_repeat Simple_repeat 2 61 0 289 81 0 0 chr17 22330223 22330260 -63108220 - MER68 LTR ERV1 -523 39 3 2188 119 7 0 chr17 22331280 22331582 -63106898 - AluSg SINE Alu -6 304 1 2581 137 45 33 chr17 22331802 22332227 -63106253 - Tigger2a DNA MER2_type 0 434 5 504 316 76 8 chr17 22332351 22332601 -63105879 - L1MC4a LINE L1 -375 5787 5521 267 0 70 0 chr17 22332611 22332654 -63105826 + (TA)n Simple_repeat Simple_repeat 2 47 0 1044 84 0 0 chr17 22332655 22332786 -63105694 - AluSc SINE Alu -178 131 1 2295 87 0 0 chr17 22332872 22333190 -63105290 - AluY SINE Alu 0 319 2 252 235 25 42 chr17 22333203 22333322 -63105158 - L1P4 LINE L1 -735 5431 5315 377 172 0 0 chr17 22333512 22333576 -63104904 + Charlie8 DNA MER1_type 82 145 -2272 621 226 15 8 chr17 22334034 22334167 -63104313 - MER58B DNA MER1_type -1 340 207 372 277 97 75 chr17 22334292 22334570 -63103910 - L2 LINE L2 -16 3256 2973 316 308 58 41 chr17 22334859 22335031 -63103449 + L1M4 LINE L1 3663 3837 -2309 657 278 96 32 chr17 22335469 22335912 -63102568 + LTR33A LTR ERVL 25 514 -9 1106 167 4 108 chr17 22336079 22336319 -63102161 + MLT1B LTR MaLR 173 387 -3 3951 170 20 14 chr17 22336325 22337134 -63101346 - L1MB7 LINE L1 -186 5998 5188 1754 145 15 5 chr17 22337143 22338023 -63100457 - L1MA5 LINE L1 -5 6295 5366 571 139 29 44 chr17 22338029 22338166 -63100314 + L1M4 LINE L1 4660 4794 -1352 * 3624 148 71 1 chr17 22338163 22338824 -63099656 - L1MA5 LINE L1 -776 5370 4664 1245 225 9 9 chr17 22338816 22339131 -63099349 - L1MB7 LINE L1 -941 5205 4891 * 242 214 0 0 chr17 22339155 22339197 -63099283 + AluJ/monomer SINE Alu 1 42 -260 286 244 12 24 chr17 22339197 22339279 -63099201 - L1M4c LINE L1 -1175 5207 5127 914 168 0 0 chr17 22339303 22339446 -63099034 + FLAM_C SINE Alu 1 143 0 2391 223 27 30 chr17 22339461 22339711 -63098769 - L1M4c LINE L1 -1298 5084 4835 2345 103 3 0 chr17 22339711 22340012 -63098468 - AluSp SINE Alu -11 302 1 2391 223 27 30 chr17 22340012 22340425 -63098055 - L1M4c LINE L1 -1547 4835 4423 1437 266 52 4 chr17 22340411 22340893 -63097587 - L1M4c LINE L1 -2534 3848 3344 * 883 264 18 9 chr17 22340894 22341121 -63097359 + MLT1C LTR MaLR 239 467 0 360 335 78 16 chr17 22341123 22341368 -63097112 - L1M4c LINE L1 -4271 2292 2033 22 0 0 0 chr17 22341368 22341390 -63097090 + AT_rich Low_complexity Low_complexity 1 22 0 387 278 104 26 chr17 22341492 22341772 -63096708 - L1M4c LINE L1 -4471 2092 1645 235 65 109 0 chr17 22341787 22341833 -63096647 - L1MB4 LINE L1 -1 6179 6129 2137 137 3 0 chr17 22341938 22342244 -63096236 - AluSx SINE Alu -5 307 1 3047 211 38 40 chr17 22342250 22342265 -63096215 - L1MB3 LINE L1 -36 6958 6944 1661 80 0 9 chr17 22342265 22342477 -63096003 - AluSq SINE Alu -8 305 96 3047 211 38 40 chr17 22342477 22343829 -63094651 - L1MB3 LINE L1 -50 6944 1379 213 196 0 0 chr17 22343829 22343875 -63094605 + (TATG)n Simple_repeat Simple_repeat 3 48 0 * 216 97 0 0 chr17 22343874 22343905 -63094575 + (CA)n Simple_repeat Simple_repeat 2 32 0 2272 98 7 0 chr17 22343919 22344214 -63094266 - AluSq SINE Alu -16 297 1 1229 231 148 37 chr17 22344214 22344360 -63094120 - L1MB3 LINE L1 -5463 1396 1268 2571 137 43 28 chr17 22344360 22344782 -63093698 - MSTB1 LTR MaLR 0 432 5 1229 231 148 37 chr17 22344782 22345041 -63093439 - L1MB3 LINE L1 -5591 1268 946 2321 95 0 7 chr17 22345043 22345347 -63093133 - AluSg SINE Alu -8 302 1 395 182 26 0 chr17 22345358 22345435 -63093045 - L1MC4 LINE L1 0 8042 7964 299 119 0 0 chr17 22345439 22345481 -63092999 - Alu SINE Alu -260 42 1 2456 239 49 12 chr17 22345494 22345543 -63092937 - L1MDa LINE L1 -1038 5502 5456 2321 109 3 0 chr17 22345543 22345855 -63092625 - AluSp SINE Alu 0 313 1 2456 239 49 12 chr17 22345855 22346561 -63091919 - L1MDa LINE L1 -1084 5456 4719 751 172 0 25 chr17 22346561 22346683 -63091797 - FAM SINE Alu -13 172 54 266 192 13 90 chr17 22346694 22346772 -63091708 - L1MDa LINE L1 -1819 4721 4650 1912 101 76 4 chr17 22346784 22347061 -63091419 - AluSg SINE Alu -13 297 1 1902 150 17 0 chr17 22347086 22347380 -63091100 - AluSx SINE Alu -13 299 1 1429 143 136 0 chr17 22347391 22347664 -63090816 - L1MA8 LINE L1 -4 6287 5978 2284 198 37 36 chr17 22347666 22348228 -63090252 - L1MDa LINE L1 -1900 4640 4078 1153 111 7 0 chr17 22348248 22348401 -63090079 - AluSq SINE Alu -159 154 1 365 239 23 0 chr17 22348456 22348544 -63089936 - MER66B LTR ERV1 -141 345 256 639 232 0 7 chr17 22348544 22348682 -63089798 - L1MDa LINE L1 -2506 4034 3898 1725 230 99 48 chr17 22348871 22349351 -63089129 - L1MDa LINE L1 -2652 3888 3359 2069 104 20 7 chr17 22349351 22349650 -63088830 - AluSg SINE Alu -7 303 1 1725 230 99 48 chr17 22349650 22349879 -63088601 - L1MDa LINE L1 -3181 3359 3143 864 195 29 75 chr17 22349879 22350120 -63088360 - L1MB8 LINE L1 0 6178 5949 * 912 220 41 8 chr17 22350100 22350345 -63088135 - L1MDa LINE L1 -3391 3149 2897 9186 180 98 73 chr17 22350355 22350507 -63087973 - L1MDa LINE L1 -3890 2831 2684 1872 140 17 20 chr17 22350507 22350807 -63087673 - AluSx SINE Alu -13 299 1 9186 180 98 73 chr17 22350807 22352196 -63086284 - L1MDa LINE L1 -4037 2684 1330 2256 77 3 27 chr17 22352196 22352493 -63085987 - AluSp SINE Alu -23 290 1 9186 180 98 73 chr17 22352493 22352571 -63085909 - L1MDa LINE L1 -5391 1330 1255 2338 76 13 7 chr17 22352571 22352875 -63085605 - AluY SINE Alu -5 306 1 9186 180 98 73 chr17 22352875 22353972 -63084508 - L1MDa LINE L1 -5466 1255 1 330 353 72 7 chr17 22354029 22354182 -63084298 - L1MC4 LINE L1 -478 7564 7402 1390 278 88 8 chr17 22354218 22354715 -63083765 - L1MC4 LINE L1 -722 7320 6784 225 360 80 8 chr17 22354864 22354989 -63083491 + L2 LINE L2 3125 3258 -14 461 261 118 17 chr17 22356175 22356442 -63082038 - L1MB8 LINE L1 -303 5881 5576 714 187 8 8 chr17 22357072 22357195 -63081285 - FLAM_A SINE Alu -10 123 1 30 45 0 0 chr17 22357205 22357249 -63081231 + AT_rich Low_complexity Low_complexity 1 44 0 893 294 180 20 chr17 22357365 22358000 -63080480 - L2 LINE L2 -1 3312 2574 438 305 112 34 chr17 22358129 22358556 -63079924 - HAL1b LINE L1 -772 576 107 2068 72 0 0 chr17 22358556 22358805 -63079675 - AluY SINE Alu -20 291 43 438 305 112 34 chr17 22358805 22358849 -63079631 - HAL1b LINE L1 -1241 107 68 2524 64 0 0 chr17 22359087 22359383 -63079097 - AluY SINE Alu -15 296 1 1883 133 53 0 chr17 22359575 22359860 -63078620 + AluJo SINE Alu 1 300 -12 925 244 47 73 chr17 22360014 22360270 -63078210 - L1MC4 LINE L1 -2156 5652 5410 565 170 198 0 chr17 22360270 22360376 -63078104 + FLAM_A SINE Alu 1 127 -6 925 244 47 73 chr17 22360376 22360528 -63077952 - L1MC4 LINE L1 -2398 5410 5255 356 281 119 73 chr17 22360642 22360759 -63077721 - L1MC4 LINE L1 -1014 5132 5022 2212 97 23 7 chr17 22360759 22361067 -63077413 - AluSp SINE Alu 0 313 1 356 281 119 73 chr17 22361067 22361089 -63077391 - L1MC4 LINE L1 -1124 5022 5002 633 121 0 10 chr17 22361089 22361188 -63077292 + L1PA5 LINE L1 6057 6154 0 356 281 119 73 chr17 22361188 22361432 -63077048 - L1MC4 LINE L1 -1144 5002 4730 1097 42 14 0 chr17 22361998 22362140 -63076340 + (TTTC)n Simple_repeat Simple_repeat 4 147 0 2047 124 7 0 chr17 22362142 22362425 -63076055 - AluSq SINE Alu -28 285 1 465 249 202 0 chr17 22362556 22362729 -63075751 - L2 LINE L2 0 3313 3106 613 292 43 36 chr17 22362791 22363038 -63075442 + MIR SINE MIR 3 249 -13 324 343 217 10 chr17 22364267 22364350 -63074130 + L2 LINE L2 2281 2346 -968 2388 197 100 28 chr17 22364350 22364879 -63073601 + MLT1F1 LTR MaLR 1 567 0 324 343 217 10 chr17 22364879 22365186 -63073294 + L2 LINE L2 2346 2752 -562 1286 150 68 18 chr17 22365616 22365836 -63072644 - AluJb SINE Alu -14 298 68 872 178 6 24 chr17 22365836 22365852 -63072628 - L1M3 LINE L1 -552 5616 5601 2465 150 11 56 chr17 22365852 22366320 -63072160 - L1MB1 LINE L1 -1 6167 5721 872 178 6 24 chr17 22366320 22366472 -63072008 - L1M3 LINE L1 -567 5601 5451 37 0 0 0 chr17 22367171 22367208 -63071272 + AT_rich Low_complexity Low_complexity 1 37 0 30 45 0 0 chr17 22367773 22367817 -63070663 + AT_rich Low_complexity Low_complexity 1 44 0 2482 67 0 13 chr17 22368110 22368425 -63070055 + AluY SINE Alu 1 311 0 1801 176 10 3 chr17 22368440 22368742 -63069738 - AluJo SINE Alu -8 304 1 1747 144 0 91 chr17 22369298 22369618 -63068862 + AluJb SINE Alu 1 291 -21 2949 134 126 21 chr17 22369664 22369778 -63068702 - MER1A DNA MER1_type -2174 526 425 2427 74 6 10 chr17 22369778 22370090 -63068390 - AluY SINE Alu 0 311 1 2949 134 126 21 chr17 22370090 22370451 -63068029 - MER1A DNA MER1_type -2275 425 1 1219 123 28 6 chr17 22370633 22370842 -63067638 + AluJo SINE Alu 100 312 0 866 170 0 0 chr17 22371315 22371450 -63067030 + AluJo SINE Alu 1 135 -177 2314 109 0 0 chr17 22372019 22372322 -63066158 - AluSx SINE Alu -9 303 1 1802 142 15 4 chr17 22572349 22572617 -62865863 - AluSx SINE Alu -39 273 3 2150 155 23 51 chr17 22572632 22572909 -62865571 + LOR1b LTR ERV1 41 303 -158 1962 131 4 0 chr17 22572909 22573184 -62865296 - AluSq SINE Alu -15 298 23 2150 155 23 51 chr17 22573184 22573339 -62865141 + LOR1b LTR ERV1 303 461 0 461 252 17 8 chr17 22573341 22573460 -62865020 - MLT1G1 LTR MaLR -74 521 402 1927 155 17 0 chr17 22573580 22573877 -62864603 - AluJb SINE Alu -10 302 1 1001 107 0 21 chr17 22573877 22574017 -62864463 - AluSq/x SINE Alu -175 137 1 1883 139 0 58 chr17 22574039 22574369 -62864111 - AluJb SINE Alu -1 311 1 404 267 78 0 chr17 22574377 22574493 -62863987 + L1ME3A LINE L1 6041 6165 -5 713 115 0 0 chr17 22574501 22574597 -62863883 + AluSq/x SINE Alu 40 135 -178 299 299 13 0 chr17 22574821 22574898 -62863582 - L2 LINE L2 -33 3239 3162 658 218 97 28 chr17 22574905 22575140 -62863340 + MLT1F1 LTR MaLR 208 503 -64 207 0 0 0 chr17 22575140 22575163 -62863317 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 658 218 97 28 chr17 22575163 22575232 -62863248 + MLT1F1 LTR MaLR 503 566 -1 427 253 99 39 chr17 22575298 22575386 -62863094 - MIR SINE MIR -6 256 175 2407 94 0 0 chr17 22575386 22575683 -62862797 + AluY SINE Alu 1 297 -14 427 253 99 39 chr17 22575683 22575776 -62862704 - MIR SINE MIR -87 175 64 1971 154 29 61 chr17 22575889 22576266 -62862214 - MLT1A1 LTR MaLR 0 365 1 1075 191 86 120 chr17 22576401 22576737 -62861743 + MLT1G LTR MaLR 3 313 -277 1903 85 4 0 chr17 22576859 22577095 -62861385 + AluSq SINE Alu 66 302 -11 475 219 25 34 chr17 22577095 22577214 -62861266 + L1ME1 LINE L1 6047 6164 -2 1926 151 0 46 chr17 22577215 22577540 -62860940 + AluJo SINE Alu 2 311 -1 1129 230 29 89 chr17 22577973 22578484 -62859996 - MLT1G3 LTR MaLR 0 595 5 2131 119 0 7 chr17 22578610 22578904 -62859576 - AluSx SINE Alu -20 292 1 906 256 120 3 chr17 22579250 22579558 -62858922 + LTR16C LTR ERVL 146 489 -2 2129 136 118 20 chr17 22579643 22580033 -62858447 - MSTA LTR MaLR 0 428 1 647 283 97 90 chr17 22580106 22580541 -62857939 + L2 LINE L2 2812 3249 -23 1674 64 0 86 chr17 22580622 22580855 -62857625 + AluSq SINE Alu 18 230 -83 684 160 84 0 chr17 22580956 22581087 -62857393 + MSTA LTR MaLR 286 427 -1 235 246 18 0 chr17 22581113 22581170 -62857310 - MLT1G1 LTR MaLR -537 58 1 1277 254 150 13 chr17 22581203 22581656 -62856824 + LTR33A LTR ERVL 9 523 0 2263 204 107 6 chr17 22581972 22582458 -62856022 + MLT1F LTR MaLR 1 535 -7 22 0 0 0 chr17 22582601 22582623 -62855857 + AT_rich Low_complexity Low_complexity 1 22 0 934 153 0 0 chr17 22582720 22582851 -62855629 + FLAM_A SINE Alu 1 131 -2 462 274 44 38 chr17 22583313 22583686 -62854794 + L1ME LINE L1 5255 5668 -453 256 186 382 0 chr17 22583703 22583805 -62854675 - L2 LINE L2 -3 3310 3170 806 176 138 0 chr17 22584005 22584164 -62854316 + REP3 LTR ERV 3 183 -379 1935 155 10 52 chr17 22584170 22584570 -62853910 - MLT1B LTR MaLR -6 384 2 1660 199 25 53 chr17 22584570 22584845 -62853635 + REP3 LTR ERV 178 440 -122 2296 123 0 0 chr17 22584845 22585154 -62853326 - AluSx SINE Alu -3 309 1 1660 199 25 53 chr17 22585154 22585274 -62853206 + REP3 LTR ERV 440 562 0 1707 111 0 0 chr17 22585927 22586152 -62852328 - AluY SINE Alu -86 225 1 257 340 64 43 chr17 22586212 22586353 -62852127 + L2 LINE L2 3098 3241 -31 2420 149 55 73 chr17 22586360 22586614 -62851866 + L1MC2 LINE L1 5782 6039 -305 2115 100 7 4 chr17 22586614 22586922 -62851558 - AluSc SINE Alu 0 309 1 2420 149 55 73 chr17 22586922 22587229 -62851251 + L1MC2 LINE L1 6039 6334 -10 207 0 0 0 chr17 22587255 22587278 -62851202 + (TG)n Simple_repeat Simple_repeat 2 24 0 264 30 0 0 chr17 22587294 22587327 -62851153 + (GA)n Simple_repeat Simple_repeat 2 34 0 1204 189 19 5 chr17 22587457 22587669 -62850811 + AluJb SINE Alu 86 300 -12 2241 105 0 0 chr17 22588039 22588325 -62850155 + AluSx SINE Alu 11 296 -16 354 246 123 23 chr17 22588862 22588992 -62849488 + L3b LINE CR1 1150 1292 -291 960 246 69 58 chr17 22588995 22589443 -62849037 - LTR16A1 LTR ERVL 0 457 5 895 231 10 26 chr17 22589773 22589968 -62848512 - MIR SINE MIR -35 227 36 217 278 0 19 chr17 22590091 22590145 -62848335 - MER5A DNA MER1_type -6 183 131 430 189 31 49 chr17 22590186 22590303 -62848177 + MIR SINE MIR 34 148 -61 748 133 0 0 chr17 22590305 22590410 -62848070 + FLAM_C SINE Alu 3 107 -36 1404 87 0 0 chr17 22590511 22590684 -62847796 - AluSc SINE Alu -136 173 1 4655 247 90 53 chr17 22590732 22590847 -62847633 - HAL1 LINE L1 -520 1987 1878 2065 97 55 17 chr17 22590847 22591137 -62847343 - AluSx SINE Alu -11 301 1 4655 247 90 53 chr17 22591137 22591584 -62846896 - HAL1 LINE L1 -629 1878 1449 1700 194 0 14 chr17 22591584 22591878 -62846602 - AluJo SINE Alu -22 290 1 4655 247 90 53 chr17 22591878 22592057 -62846423 - HAL1 LINE L1 -1058 1449 1278 1966 167 0 0 chr17 22592057 22592356 -62846124 - AluJb SINE Alu -13 299 1 4655 247 90 53 chr17 22592356 22592594 -62845886 - HAL1 LINE L1 -1229 1278 1050 297 0 0 0 chr17 22592594 22592627 -62845853 + (TG)n Simple_repeat Simple_repeat 1 33 0 4655 247 90 53 chr17 22592627 22592838 -62845642 - HAL1 LINE L1 -1457 1050 848 963 228 0 0 chr17 22592838 22593027 -62845453 + MER5A DNA MER1_type 1 189 0 4655 247 90 53 chr17 22593027 22593661 -62844819 - HAL1 LINE L1 -1659 848 82 2253 78 0 7 chr17 22593661 22593955 -62844525 + AluY SINE Alu 1 292 -19 4655 247 90 53 chr17 22593955 22594037 -62844443 - HAL1 LINE L1 -2425 82 5 2344 59 0 74 chr17 22594438 22594762 -62843718 + AluY SINE Alu 1 300 -11 986 141 4 137 chr17 22597660 22597782 -62840698 + MLT1B LTR MaLR 1 138 -252 2304 103 0 3 chr17 22597782 22598082 -62840398 + AluSq SINE Alu 1 299 -14 986 141 4 137 chr17 22598082 22598204 -62840276 + MLT1B LTR MaLR 138 210 -180 2257 108 26 0 chr17 22598204 22598509 -62839971 + AluSq SINE Alu 1 313 0 986 141 4 137 chr17 22598509 22598526 -62839954 + MLT1B LTR MaLR 210 228 -162 296 71 0 0 chr17 22598510 22598552 -62839928 - MADE1 DNA Mariner -37 43 2 * 1948 150 3 23 chr17 22598833 22599140 -62839340 + AluJb SINE Alu 5 305 -7 563 223 23 46 chr17 22599281 22599456 -62839024 - MLT2E LTR ERVL 0 628 458 1107 246 46 4 chr17 22599520 22599801 -62838679 - MLT2E LTR ERVL -326 302 10 231 125 0 0 chr17 22600084 22600116 -62838364 + MLT1G1 LTR MaLR 1 32 -563 904 179 55 55 chr17 22600116 22600334 -62838146 + MLT1B LTR MaLR 1 218 -172 1553 136 0 30 chr17 22600503 22600738 -62837742 - AluSx SINE Alu -84 228 1 2219 107 0 0 chr17 22600821 22601126 -62837354 - AluSc SINE Alu 0 305 1 1255 103 11 27 chr17 22601129 22601314 -62837166 - AluSg/x SINE Alu -11 301 120 1707 164 66 0 chr17 22601352 22601638 -62836842 - AluJb SINE Alu -7 305 1 2003 157 0 3 chr17 22601900 22602200 -62836280 + AluJo SINE Alu 1 299 -13 1074 145 30 15 chr17 22602201 22602401 -62836079 - L1MB5 LINE L1 -10 6164 5962 2633 160 28 2 chr17 22602420 22602890 -62835590 - L1MB3 LINE L1 -2 6181 5700 2638 50 0 0 chr17 22603063 22603363 -62835117 - AluY SINE Alu -11 300 1 2172 114 14 0 chr17 22603365 22603662 -62834818 - AluSx SINE Alu -11 301 1 826 157 0 8 chr17 22603777 22603911 -62834569 - FLAM_A SINE Alu 0 133 1 401 134 15 0 chr17 22605069 22605136 -62833344 - MLT1H1 LTR MaLR 0 555 488 279 79 0 0 chr17 22605170 22605208 -62833272 + (T)n Simple_repeat Simple_repeat 1 38 0 225 162 0 0 chr17 22605308 22605345 -62833135 - Alu SINE Alu -265 37 1 241 296 83 9 chr17 22605350 22605458 -62833022 - Charlie8 DNA MER1_type -2301 116 1 783 169 8 0 chr17 22605494 22605624 -62832856 - FLAM_C SINE Alu 0 133 3 2244 124 3 3 chr17 22605708 22606014 -62832466 - AluSx SINE Alu -6 306 1 1615 145 46 86 chr17 22606247 22606572 -62831908 - AluJo SINE Alu 0 312 1 1826 163 0 67 chr17 22606578 22606774 -62831706 - AluJb SINE Alu 0 312 145 2369 106 6 3 chr17 22606774 22607085 -62831395 - AluSx SINE Alu 0 312 1 1826 163 0 67 chr17 22607085 22607219 -62831261 - AluJb SINE Alu -167 145 4 355 248 26 60 chr17 22607867 22607984 -62830496 - MIR SINE MIR -1 261 149 499 289 113 4 chr17 22608406 22608645 -62829835 - L1ME4a LINE L1 0 6121 5857 1539 185 30 27 chr17 22608689 22608986 -62829494 + AluJo SINE Alu 1 298 -14 291 54 0 0 chr17 22609314 22609351 -62829129 + (TG)n Simple_repeat Simple_repeat 2 38 0 2558 64 0 13 chr17 22609730 22610043 -62828437 + AluY SINE Alu 1 309 -2 336 203 54 0 chr17 22610130 22610204 -62828276 + MIR SINE MIR 41 118 -90 208 293 35 0 chr17 22610221 22610279 -62828201 + L2 LINE L2 3201 3260 -12 464 186 20 20 chr17 22610450 22610552 -62827928 - U13 snRNA snRNA -2 102 1 235 294 0 0 chr17 22611333 22611384 -62827096 - MIR3 SINE MIR -8 200 150 261 255 105 6 chr17 22611549 22611690 -62826790 + MIR3 SINE MIR 54 176 -32 * 1071 215 33 16 chr17 22611628 22611870 -62826610 - MIR SINE MIR -15 247 2 249 175 0 53 chr17 22611870 22611916 -62826564 + L3 LINE CR1 1509 1551 -26 723 176 25 35 chr17 22613010 22613209 -62825271 + LTR37B LTR ERV1 272 468 0 484 207 240 40 chr17 22613605 22613755 -62824725 - MER5A DNA MER1_type -1 188 9 510 258 11 59 chr17 22613904 22614090 -62824390 - MIR SINE MIR -6 256 80 4016 85 3 38 chr17 22614381 22614856 -62823624 - MER41A LTR ERV1 0 554 101 2692 48 0 0 chr17 22614856 22615165 -62823315 + AluY SINE Alu 1 309 -2 4016 85 3 38 chr17 22615165 22615263 -62823217 - MER41A LTR ERV1 -453 101 1 360 257 71 64 chr17 22616309 22616449 -62822031 + MIR3 SINE MIR 6 146 -62 511 47 0 0 chr17 22616970 22617034 -62821446 - MLT1A1 LTR MaLR -28 337 274 743 32 11 0 chr17 22617348 22617442 -62821038 + (GAAA)n Simple_repeat Simple_repeat 2 96 0 946 262 58 92 chr17 22617442 22617794 -62820686 + L2 LINE L2 2690 3052 -261 2519 76 0 0 chr17 22617794 22618098 -62820382 - AluY SINE Alu -7 304 1 946 262 58 92 chr17 22618098 22618109 -62820371 + L2 LINE L2 3052 3062 -251 2300 95 0 0 chr17 22618109 22618417 -62820063 - AluSx SINE Alu 0 308 1 946 262 58 92 chr17 22618417 22618703 -62819777 + L2 LINE L2 3062 3312 -1 528 285 145 1 chr17 22620075 22620261 -62818219 - MIR SINE MIR -10 252 42 180 250 9 121 chr17 22620335 22620451 -62818029 + MIR SINE MIR 109 211 -51 263 250 67 0 chr17 22620698 22620758 -62817722 - MER91C DNA MER1_type -38 102 39 24 0 0 0 chr17 22621002 22621026 -62817454 + GC_rich Low_complexity Low_complexity 1 24 0 234 314 85 8 chr17 22622270 22622388 -62816092 + MIR SINE MIR 96 222 -40 642 210 80 84 chr17 22622474 22622546 -62815934 - MLT1J LTR MaLR -3 508 437 271 0 0 0 chr17 22622546 22622576 -62815904 + (TTTTG)n Simple_repeat Simple_repeat 2 130 0 2228 88 0 34 chr17 22622576 22622871 -62815609 - AluSx SINE Alu -1 314 1 642 210 80 84 chr17 22622871 22623083 -62815397 - MLT1J LTR MaLR -72 439 224 1069 276 97 66 chr17 22623626 22623865 -62814615 + MER115 DNA AcHobo 20 250 -443 1773 189 25 11 chr17 22623865 22624224 -62814256 - MLT1A1 LTR MaLR 0 365 2 1069 276 97 66 chr17 22624224 22624572 -62813908 + MER115 DNA AcHobo 250 625 -68 296 175 10 134 chr17 22624711 22624733 -62813747 + Zaphod DNA AcHobo 3947 3970 -61 2296 97 3 7 chr17 22624733 22625033 -62813447 + AluSq SINE Alu 1 299 -14 296 175 10 134 chr17 22625033 22625107 -62813373 + Zaphod DNA AcHobo 3970 4031 0 2586 59 7 0 chr17 22625337 22625641 -62812839 + AluY SINE Alu 1 306 -5 1521 114 0 18 chr17 22626179 22626398 -62812082 - AluSg/x SINE Alu -15 297 83 2249 171 7 23 chr17 22626499 22626926 -62811554 + MLT1F LTR MaLR 100 519 -23 2068 195 39 17 chr17 22626925 22627386 -62811094 + MER110 LTR ERV1 21 491 0 * 2365 67 0 3 chr17 22627425 22627731 -62810749 - AluY SINE Alu 0 305 1 1396 186 84 7 chr17 22627733 22628008 -62810472 - AluJo SINE Alu -16 296 1 616 106 0 0 chr17 22628036 22628121 -62810359 - AluJ/FLAM SINE Alu -226 86 2 1015 157 56 0 chr17 22628170 22628348 -62810132 - MER3 DNA MER1_type -21 188 1 2378 85 0 0 chr17 22630057 22630350 -62808130 - AluSg SINE Alu -17 293 1 427 217 83 33 chr17 22630407 22630527 -62807953 - MER5B DNA MER1_type -48 130 5 911 119 0 8 chr17 22630603 22630737 -62807743 - FLAM_C SINE Alu 0 133 1 419 257 9 9 chr17 22630760 22630865 -62807615 + MIR SINE MIR 47 151 -111 921 176 43 32 chr17 22630876 22631063 -62807417 - MER5A DNA MER1_type 0 189 1 2129 110 40 20 chr17 22631620 22631920 -62806560 - AluSx SINE Alu -6 306 1 882 141 115 45 chr17 22632077 22632233 -62806247 + AluJb SINE Alu 9 175 -137 364 262 27 47 chr17 22632679 22632828 -62805652 + L2 LINE L2 3131 3276 -37 524 136 0 10 chr17 22632837 22632940 -62805540 + (TGGA)n Simple_repeat Simple_repeat 4 105 0 1587 201 44 34 chr17 22632993 22633177 -62805303 - Charlie1 DNA MER1_type 0 2761 2580 1911 182 115 43 chr17 22633177 22633683 -62804797 + MLT1F LTR MaLR 1 542 0 1587 201 44 34 chr17 22633683 22633974 -62804506 - Charlie1 DNA MER1_type -181 2580 1 2326 81 0 71 chr17 22636096 22636283 -62802197 - AluSx SINE Alu -12 300 144 2033 107 29 0 chr17 22636283 22636555 -62801925 - AluSx SINE Alu -32 280 1 2326 81 0 71 chr17 22636555 22636690 -62801790 - AluSx SINE Alu -168 144 1 2562 66 0 0 chr17 22637078 22637383 -62801097 + AluY SINE Alu 1 305 -6 299 274 166 17 chr17 22637456 22637631 -62800849 - LTR67 LTR ERVL -5 552 352 360 0 0 0 chr17 22637792 22637832 -62800648 + (CA)n Simple_repeat Simple_repeat 2 41 0 423 284 164 0 chr17 22638014 22638130 -62800350 - MIR SINE MIR -120 142 8 205 272 114 26 chr17 22638262 22638376 -62800104 - MIR3 SINE MIR -82 126 3 809 266 78 78 chr17 22638493 22639007 -62799473 + LTR67 LTR ERVL 44 557 0 307 263 12 12 chr17 22640307 22640387 -62798093 + MIR SINE MIR 20 99 -163 228 164 0 110 chr17 22640423 22640496 -62797984 + MLT1G1 LTR MaLR 98 162 -387 665 194 185 58 chr17 22640546 22640876 -62797604 + MLT1G1 LTR MaLR 224 595 0 211 293 158 0 chr17 22640882 22640964 -62797516 + MIR SINE MIR 106 200 -62 531 301 82 6 chr17 22641258 22641441 -62797039 + MIR SINE MIR 49 245 -17 469 263 144 16 chr17 22641607 22641800 -62796680 + LTR16A LTR ERVL 25 242 -208 2273 164 62 31 chr17 22641800 22642282 -62796198 + MLT1D LTR MaLR 1 497 -8 652 188 122 35 chr17 22642296 22642493 -62795987 + LTR16A LTR ERVL 237 450 0 321 218 0 13 chr17 22642522 22642600 -62795880 - L1MC5 LINE L1 -46 7915 7839 2465 74 0 13 chr17 22642633 22642944 -62795536 - AluSp SINE Alu -6 307 1 393 320 7 20 chr17 22643354 22643504 -62794976 - MIR SINE MIR -34 228 81 1422 233 63 20 chr17 22643509 22643951 -62794529 - MLT1C LTR MaLR -1 466 6 1252 246 13 7 chr17 22644059 22644360 -62794120 + MLT1G LTR MaLR 1 303 -287 1264 107 17 6 chr17 22644363 22644541 -62793939 - AluSg/x SINE Alu -2 308 129 1124 175 106 22 chr17 22644546 22644820 -62793660 + MLT1G LTR MaLR 294 590 0 182 33 67 0 chr17 22644909 22644939 -62793541 + A-rich Low_complexity Low_complexity 3 34 0 453 215 74 54 chr17 22645863 22646188 -62792292 - MER34 LTR ERV1 0 542 265 943 174 56 0 chr17 22646221 22646399 -62792081 - MER34C LTR ERV1 -397 188 1 963 295 63 25 chr17 22647316 22647401 -62791079 - LTR16C LTR ERVL -79 412 332 2500 131 13 8 chr17 22647401 22647789 -62790691 + MLT1B LTR MaLR 1 390 0 963 295 63 25 chr17 22647789 22648100 -62790380 - LTR16C LTR ERVL -159 332 1 311 250 169 0 chr17 22648482 22648606 -62789874 - LTR67 LTR ERVL -4 553 409 864 208 147 94 chr17 22649110 22649452 -62789028 - MLT1G LTR MaLR -8 582 198 2360 91 0 0 chr17 22649452 22649767 -62788713 + AluSq SINE Alu 1 315 0 864 208 147 94 chr17 22649767 22649976 -62788504 - MLT1G LTR MaLR -392 198 1 954 96 0 15 chr17 22649985 22650121 -62788359 + FLAM_C SINE Alu 9 142 -1 435 266 73 51 chr17 22651250 22651392 -62787088 - MIR SINE MIR -21 241 93 2492 139 56 15 chr17 22651392 22651801 -62786679 - MSTB LTR MaLR 0 426 1 435 266 73 51 chr17 22651801 22651835 -62786645 - MIR SINE MIR -169 93 61 1652 144 70 0 chr17 22651933 22652203 -62786277 + AluJo SINE Alu 1 289 -23 271 307 30 0 chr17 22652225 22652326 -62786154 - MLT1J LTR MaLR -101 410 307 523 98 43 22 chr17 22652327 22652419 -62786061 - MER53 DNA DNA 0 189 96 1331 188 5 5 chr17 22652435 22652658 -62785822 - AluJb SINE Alu -13 299 77 37 52 0 0 chr17 22652666 22652724 -62785756 + AT_rich Low_complexity Low_complexity 1 58 0 836 224 142 29 chr17 22652745 22653026 -62785454 - MLT1J LTR MaLR -198 313 1 710 294 62 11 chr17 22653243 22653518 -62784962 + LTR16A1 LTR ERVL 138 426 -31 259 286 45 36 chr17 22653776 22653888 -62784592 - LTR33A LTR ERVL 0 523 411 259 256 26 77 chr17 22654066 22654107 -62784373 - MLT2E LTR ERVL -486 142 100 3395 188 17 21 chr17 22654107 22654500 -62783980 - MER82 DNA MER2_type 0 653 263 2270 114 0 22 chr17 22654500 22654816 -62783664 + AluSx SINE Alu 1 309 -3 3395 188 17 21 chr17 22654816 22655075 -62783405 - MER82 DNA MER2_type -390 263 4 259 256 26 77 chr17 22655075 22655150 -62783330 - MLT2E LTR ERVL -528 100 32 2108 267 75 29 chr17 22655262 22656322 -62782158 - L1MCb LINE L1 -4327 2795 1485 441 233 51 51 chr17 22656341 22656517 -62781963 - L1MCb LINE L1 -6228 195 20 998 224 77 112 chr17 22656750 22657312 -62781168 + MLT1H LTR MaLR 1 542 -7 861 244 0 15 chr17 22657313 22657510 -62780970 + MLT1J LTR MaLR 5 198 -313 2506 77 0 0 chr17 22658579 22658878 -62779602 + AluSx SINE Alu 1 299 -13 1024 50 0 0 chr17 22659139 22659259 -62779221 - AluY SINE Alu -190 121 2 585 300 45 0 chr17 22659260 22659460 -62779020 - L2 LINE L2 -1881 1433 1225 462 299 32 13 chr17 22659716 22659870 -62778610 - MIR SINE MIR -2 260 104 390 279 27 0 chr17 22660095 22660206 -62778274 + MER81 DNA DNA 1 114 0 1991 144 0 19 chr17 22660265 22660577 -62777903 - AluSq SINE Alu -7 306 1 281 167 0 0 chr17 22660741 22660789 -62777691 - MLT2B1 LTR ERVL 0 520 473 836 114 0 16 chr17 22660799 22660922 -62777558 - MLT2B1 LTR ERVL -242 278 158 1924 148 148 5 chr17 22660922 22661295 -62777185 - MSTB LTR MaLR 0 426 1 937 140 32 6 chr17 22661295 22661452 -62777028 - MLT2B1 LTR ERVL -358 162 2 413 306 35 29 chr17 22661595 22661765 -62776715 - MIR SINE MIR -47 215 45 415 240 43 70 chr17 22662352 22662571 -62775909 - LTR16A1 LTR ERVL -115 342 155 219 277 169 0 chr17 22662780 22662845 -62775635 + L2 LINE L2 3155 3230 -42 533 193 118 0 chr17 22663404 22663523 -62774957 + FLAM_C SINE Alu 1 133 0 2514 183 127 33 chr17 22663738 22664437 -62774043 - LTR50 LTR ERVL -24 771 7 2073 107 11 0 chr17 22664437 22664761 -62773719 + AluSx SINE Alu 1 327 0 2411 109 0 0 chr17 22665486 22665798 -62772682 + AluSx SINE Alu 1 312 0 234 41 41 41 chr17 22665821 22665870 -62772610 + (CAAAAA)n Simple_repeat Simple_repeat 4 52 0 294 276 95 57 chr17 22665880 22665985 -62772495 - L2 LINE L2 -38 3234 3126 437 118 0 0 chr17 22666108 22666176 -62772304 - MER53 DNA DNA 0 189 122 960 187 176 80 chr17 22666512 22666847 -62771633 + MLT2D LTR ERVL 2 479 -41 314 182 0 13 chr17 22666853 22666930 -62771550 + (TA)n Simple_repeat Simple_repeat 1 76 0 201 39 0 0 chr17 22666941 22666967 -62771513 + (TG)n Simple_repeat Simple_repeat 2 27 0 251 48 0 48 chr17 22666967 22667004 -62771476 + MLT2C1 LTR ERVL 355 389 -8 1901 166 27 27 chr17 22667882 22668256 -62770224 + MLT1A2 LTR MaLR 1 374 0 422 219 15 22 chr17 22668349 22668366 -62770114 - L1MA10 LINE L1 -2 6332 6316 1375 188 25 100 chr17 22668366 22668797 -62769683 - L1ME2 LINE L1 -9 6155 5757 777 291 83 28 chr17 22668852 22669689 -62768791 - L1ME3 LINE L1 -279 5883 5004 1057 48 0 0 chr17 22669766 22669891 -62768589 - AluY SINE Alu -11 300 176 2616 63 0 0 chr17 22670002 22670305 -62768175 - AluSg SINE Alu -7 303 1 249 298 141 53 chr17 22670305 22670604 -62767876 + L1ME2 LINE L1 3912 4236 -1910 769 233 81 91 chr17 22670607 22671224 -62767256 + L1ME2 LINE L1 4342 4952 -1194 1628 118 0 0 chr17 22671233 22671475 -62767005 + AluSq SINE Alu 63 304 0 1765 216 120 21 chr17 22671477 22671921 -62766559 + L1ME2 LINE L1 5280 5803 -367 2013 117 17 0 chr17 22671921 22672212 -62766268 + AluSx SINE Alu 1 296 -16 1765 216 120 21 chr17 22672212 22672382 -62766098 + L1ME2 LINE L1 5803 5955 -215 277 167 0 0 chr17 22672568 22672610 -62765870 - FLAM_A SINE Alu -15 118 77 230 242 15 30 chr17 22672621 22672687 -62765793 + L1ME2 LINE L1 6052 6116 -48 273 159 232 0 chr17 22672702 22672771 -62765709 - L1MB8 LINE L1 -1 6177 6093 1174 123 18 112 chr17 22672781 22673057 -62765423 - L1MB4 LINE L1 0 6180 5931 916 196 0 0 chr17 22675438 22675601 -62762879 - L1MB4 LINE L1 -237 5943 5781 331 229 29 0 chr17 22675601 22675671 -62762809 - MER2 DNA MER2_type 0 345 274 704 189 16 16 chr17 22675676 22675803 -62762677 + FLAM_A SINE Alu 7 133 -9 1227 102 87 15 chr17 22675843 22676039 -62762441 - MER2 DNA MER2_type -135 210 1 941 166 14 51 chr17 22676039 22676263 -62762217 - L1MB4 LINE L1 -398 5782 5548 824 209 121 47 chr17 22676271 22676330 -62762150 - L2 LINE L2 -1480 1834 1781 608 146 182 0 chr17 22676330 22676440 -62762040 - FLAM_A SINE Alu -3 130 1 824 209 121 47 chr17 22676440 22676677 -62761803 - L2 LINE L2 -1533 1781 1516 241 297 0 0 chr17 22676802 22676866 -62761614 - MIR3 SINE MIR -31 177 114 269 156 0 0 chr17 22676959 22677004 -62761476 + (TG)n Simple_repeat Simple_repeat 1 45 0 884 151 5 113 chr17 22677159 22677371 -62761109 - MER53 DNA DNA 0 189 1 224 370 56 6 chr17 22677907 22678069 -62760411 + MIR SINE MIR 64 233 -29 1877 103 88 0 chr17 22678240 22678512 -62759968 + AluSq SINE Alu 1 296 -17 2720 184 90 52 chr17 22678812 22679432 -62759048 + MLT1E1 LTR MaLR 3 646 -8 2135 127 0 6 chr17 22679585 22679899 -62758581 - AluSx SINE Alu 0 312 1 267 314 54 72 chr17 22680194 22680417 -62758063 + MLT1L LTR MaLR 1 219 -369 * 366 303 60 22 chr17 22680409 22680594 -62757886 + MLT1L LTR MaLR 424 615 0 323 226 141 63 chr17 22680626 22680680 -62757800 - MLT1J LTR MaLR -24 487 439 186 43 0 0 chr17 22680680 22680703 -62757777 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 323 226 141 63 chr17 22680703 22680969 -62757511 - MLT1J LTR MaLR -72 439 111 231 247 41 27 chr17 22680912 22680985 -62757495 - LTR67 LTR ERVL -385 172 99 * 184 366 10 0 chr17 22681171 22681272 -62757208 + L2 LINE L2 2213 2314 -1000 498 196 0 0 chr17 22681824 22681926 -62756554 + GA-rich Low_complexity Low_complexity 3 104 0 392 271 37 0 chr17 22681993 22682100 -62756380 + MIR3 SINE MIR 97 207 -1 2278 86 7 0 chr17 22682357 22682649 -62755831 + AluSg SINE Alu 1 294 -16 665 306 28 7 chr17 22682673 22682957 -62755523 - L1M4 LINE L1 -1095 5051 4762 332 216 93 55 chr17 22682986 22683222 -62755258 - L1M4 LINE L1 -1724 4422 4178 2295 133 109 122 chr17 22683235 22683703 -62754777 + MLT2D LTR ERVL 3 464 0 415 265 63 97 chr17 22683704 22683846 -62754634 - L1M4 LINE L1 -1977 4169 4024 1897 160 0 0 chr17 22683846 22684146 -62754334 - AluSx SINE Alu -12 300 1 415 265 63 97 chr17 22684146 22684392 -62754088 - L1M4 LINE L1 -2122 4024 3771 2374 68 0 0 chr17 22684392 22684685 -62753795 - AluY SINE Alu -18 293 1 415 265 63 97 chr17 22684685 22684814 -62753666 - L1M4 LINE L1 -2375 3771 3639 1704 124 70 24 chr17 22684814 22685112 -62753368 - AluSx SINE Alu 0 312 1 415 265 63 97 chr17 22685112 22685155 -62753325 - L1M4 LINE L1 -2507 3639 3596 3336 64 2 9 chr17 22685155 22685591 -62752889 + L1PA8 LINE L1 5738 6170 -2 415 265 63 97 chr17 22685591 22685713 -62752767 - L1M4 LINE L1 -2550 3596 3471 2285 64 10 0 chr17 22685713 22686010 -62752470 - AluY SINE Alu -11 300 1 415 265 63 97 chr17 22686010 22686143 -62752337 - L1M4 LINE L1 -2675 3471 3335 2408 58 3 0 chr17 22686143 22686437 -62752043 - AluY SINE Alu -16 295 1 415 265 63 97 chr17 22686437 22686572 -62751908 - L1M4 LINE L1 -2811 3335 3142 1669 260 29 14 chr17 22687671 22688114 -62750366 - LTR16A LTR ERVL 0 450 1 757 330 41 34 chr17 22688238 22688769 -62749711 - HERV16 LTR ERVL -381 5383 4849 2326 60 0 32 chr17 22688782 22689097 -62749383 - AluY SINE Alu -6 305 1 2133 119 3 0 chr17 22689150 22689460 -62749020 - AluSx SINE Alu -1 311 1 3437 207 39 13 chr17 22689654 22690506 -62747974 - L1M4 LINE L1 -989 5393 4520 1838 150 0 29 chr17 22690524 22690603 -62747877 - AluJo SINE Alu -8 304 224 7977 116 50 10 chr17 22690603 22691831 -62746649 + MER52C LTR ERV1 1 1278 0 1838 150 0 29 chr17 22691831 22692064 -62746416 - AluJo SINE Alu -88 224 1 764 211 0 32 chr17 22692094 22692250 -62746230 - MLT1D LTR MaLR -42 463 313 3069 217 42 10 chr17 22692352 22693136 -62745344 - L1M4 LINE L1 -2028 4354 3546 4860 83 0 29 chr17 22693156 22693852 -62744628 + L1PB1 LINE L1 5475 6150 -1 485 271 0 0 chr17 22693861 22693979 -62744501 + L1M4 LINE L1 3775 3892 -2254 501 212 20 0 chr17 22693984 22694135 -62744345 - L1M4 LINE L1 -2852 3530 3377 692 326 27 30 chr17 22694144 22694504 -62743976 - HERV16 LTR ERVL -1593 3694 3162 1266 281 92 19 chr17 22694511 22694757 -62743723 - HERV16 LTR ERVL -3546 1450 1223 1808 172 30 60 chr17 22694757 22695159 -62743321 - MLT1B LTR MaLR 0 390 1 1266 281 92 19 chr17 22695159 22695379 -62743101 - HERV16 LTR ERVL -3773 1223 950 1936 186 49 55 chr17 22695389 22695858 -62742622 - MLT1C LTR MaLR 0 467 2 785 275 73 29 chr17 22695860 22696133 -62742347 - HERV16 LTR ERVL -4053 943 659 2049 198 37 28 chr17 22696133 22696584 -62741896 - L1PA15-16 LINE L1 -3805 2577 2132 1794 170 0 13 chr17 22696584 22696890 -62741590 - AluJo SINE Alu -10 302 1 2049 198 37 28 chr17 22696890 22697081 -62741399 - L1PA15-16 LINE L1 -4250 2132 1944 2061 134 0 3 chr17 22697081 22697388 -62741092 - AluSx SINE Alu -6 306 1 2049 198 37 28 chr17 22697388 22697599 -62740881 - L1PA15-16 LINE L1 -4438 1944 1646 2039 182 96 15 chr17 22697636 22698031 -62740449 - L1M4 LINE L1 -5656 886 460 1097 184 19 10 chr17 22698030 22698237 -62740243 - L1M4 LINE L1 -6331 211 3 * 964 295 7 18 chr17 22698237 22698515 -62739965 - HERV16 LTR ERVL -4335 661 387 278 232 14 14 chr17 22698515 22698584 -62739896 + HERV16 LTR ERVL 171 239 -4757 929 126 14 34 chr17 22698592 22698799 -62739681 + L1MA7 LINE L1 6087 6289 -2 463 247 52 17 chr17 22699124 22699298 -62739182 + L1M4 LINE L1 2316 2495 -3651 228 111 0 0 chr17 22699340 22699376 -62739104 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 739 236 7 0 chr17 22699378 22699522 -62738958 - FRAM SINE Alu -31 145 1 656 280 40 24 chr17 22699529 22699858 -62738622 + L1M4 LINE L1 2539 2872 -3274 1353 107 51 5 chr17 22699865 22700257 -62738223 - L1PA16 LINE L1 -9 6157 5708 * 1560 255 18 4 chr17 22700256 22700391 -62738089 + L1M4 LINE L1 2913 3045 -3101 2274 66 3 0 chr17 22700391 22700679 -62737801 + AluY SINE Alu 1 289 -22 1560 255 18 4 chr17 22700679 22701053 -62737427 + L1M4 LINE L1 3045 3429 -2717 818 173 0 0 chr17 22701059 22701192 -62737288 + FLAM_C SINE Alu 1 133 -10 856 282 23 80 chr17 22701193 22701717 -62736763 + L1M4 LINE L1 3432 3925 -2221 1712 162 0 0 chr17 22701728 22702036 -62736444 - AluSg SINE Alu -2 308 1 6169 101 13 4 chr17 22702255 22703686 -62734794 - L1PA16 LINE L1 -11 6155 4716 222 37 0 0 chr17 22703853 22703880 -62734600 + (TTCC)n Simple_repeat Simple_repeat 2 28 0 381 258 118 0 chr17 22703880 22703973 -62734507 - L2 LINE L2 -16 3297 3194 201 349 128 20 chr17 22703948 22704097 -62734383 + L2 LINE L2 3101 3265 -7 * 2725 109 33 19 chr17 22704310 22704732 -62733748 - MSTA LTR MaLR 0 428 1 622 307 68 0 chr17 22704985 22705177 -62733303 + MIR SINE MIR 20 224 -38 701 180 35 23 chr17 22705177 22705349 -62733131 + L1MA8 LINE L1 5931 6104 -187 469 179 13 0 chr17 22705433 22705511 -62732969 - Tigger5 DNA MER2_type -2244 79 1 656 229 66 0 chr17 22705518 22705684 -62732796 + L1MA8 LINE L1 6112 6288 -3 2335 143 121 5 chr17 22705696 22706116 -62732364 - MER31A LTR ERV1 -16 469 1 829 161 161 0 chr17 22706116 22706277 -62732203 + MER5A DNA MER1_type 3 189 0 561 192 8 46 chr17 22706375 22706505 -62731975 + MER5B DNA MER1_type 18 142 -36 886 183 39 0 chr17 22706505 22706685 -62731795 - MER5A DNA MER1_type -2 187 1 768 143 30 23 chr17 22707173 22707306 -62731174 - FLAM_C SINE Alu -1 142 9 469 188 119 10 chr17 22707383 22707484 -62730996 + L2 LINE L2 3196 3307 -6 262 327 29 0 chr17 22707668 22707772 -62730708 - L2 LINE L2 -214 3058 2952 357 253 13 0 chr17 22708200 22708279 -62730201 - MIR SINE MIR -70 192 113 493 155 54 70 chr17 22708716 22708845 -62729635 + MIR3 SINE MIR 61 187 -21 2206 115 0 3 chr17 22708999 22709311 -62729169 - AluSx SINE Alu -1 311 1 1506 133 25 4 chr17 22709923 22710164 -62728316 + AluJb SINE Alu 34 279 -33 301 231 123 0 chr17 22710508 22710573 -62727907 + L2 LINE L2 3193 3265 -7 300 263 95 11 chr17 22710583 22710678 -62727802 - MIR SINE MIR -79 183 81 312 306 0 0 chr17 22710844 22711017 -62727463 + (TG)n Simple_repeat Simple_repeat 2 174 0 211 225 0 0 chr17 22711019 22711059 -62727421 + (TATATG)n Simple_repeat Simple_repeat 2 41 0 578 246 3 0 chr17 22711066 22711400 -62727080 + (TG)n Simple_repeat Simple_repeat 1 335 0 1655 192 24 87 chr17 22711683 22712106 -62726374 + MLT2C2 LTR ERVL 1 391 -73 1969 121 0 0 chr17 22712106 22712419 -62726061 - AluSx SINE Alu 0 315 3 1655 192 24 87 chr17 22712419 22712488 -62725992 + MLT2C2 LTR ERVL 391 463 -1 1534 230 16 29 chr17 22712879 22713258 -62725222 - MLT1A2 LTR MaLR 0 374 1 1173 117 99 33 chr17 22713700 22713758 -62724722 - L1MC2 LINE L1 -340 6004 5951 2111 115 0 3 chr17 22713758 22714063 -62724417 - AluSq SINE Alu -9 304 1 1173 117 99 33 chr17 22714063 22714217 -62724263 - L1MC2 LINE L1 -393 5951 5778 420 146 0 104 chr17 22714526 22714583 -62723897 + MER94 DNA DNA 26 72 -62 1999 131 0 0 chr17 22714583 22714899 -62723581 + AluSx SINE Alu 1 316 0 420 146 0 104 chr17 22714899 22714936 -62723544 + MER94 DNA DNA 72 111 -23 423 221 32 11 chr17 22715163 22715258 -62723222 - MLT1J1 LTR MaLR -108 338 242 * 424 216 23 0 chr17 22715252 22715340 -62723140 + MER81 DNA DNA 22 111 -3 814 251 62 41 chr17 22715343 22715586 -62722894 - MLT1J1 LTR MaLR -192 254 7 1728 193 134 43 chr17 22716569 22717009 -62721471 - MLT1D LTR MaLR 0 505 26 517 272 95 0 chr17 22717186 22717344 -62721136 - MIR SINE MIR -70 192 20 786 170 14 20 chr17 22717943 22718090 -62720390 - AluJb SINE Alu -165 147 2 198 0 0 0 chr17 22718151 22718173 -62720307 + (T)n Simple_repeat Simple_repeat 1 22 0 459 253 117 19 chr17 22718401 22718555 -62719925 - MLT1J2 LTR MaLR -22 428 260 403 189 0 0 chr17 22718618 22718708 -62719772 - AluSc SINE Alu -1 308 219 393 315 0 9 chr17 22718729 22718840 -62719640 - MLT1I LTR MaLR -270 139 30 2454 193 27 17 chr17 22718844 22719287 -62719193 + MER82 DNA MER2_type 1 451 -202 5354 149 38 1 chr17 22719287 22720154 -62718326 - MER54A LTR ERVL 0 901 3 2454 193 27 17 chr17 22720154 22720193 -62718287 + MER82 DNA MER2_type 451 488 -165 1089 135 79 0 chr17 22720194 22720372 -62718108 - LTR47A LTR ERVL 0 452 261 756 262 24 0 chr17 22720592 22720756 -62717724 + MER82 DNA MER2_type 485 652 -1 1755 211 89 77 chr17 22720763 22721345 -62717135 - MLT1G1 LTR MaLR -6 589 1 1102 243 94 45 chr17 22721562 22722010 -62716470 + MLT1H LTR MaLR 58 527 -22 1840 152 0 29 chr17 22722283 22722598 -62715882 - AluJo SINE Alu -6 306 1 1957 115 3 16 chr17 22723195 22723500 -62714980 - AluSq SINE Alu -12 301 1 252 196 0 20 chr17 22723516 22723567 -62714913 - MLT1I LTR MaLR 0 409 360 757 209 0 50 chr17 22723693 22723875 -62714605 - MLT1J1 LTR MaLR -253 193 21 1394 235 66 47 chr17 22724658 22725083 -62713397 + MLT2F LTR ERVL 1 433 -230 578 143 0 41 chr17 22725117 22725215 -62713265 + FRAM SINE Alu 68 161 -15 2193 185 26 11 chr17 22725243 22725621 -62712859 + MLT1F1 LTR MaLR 179 562 -5 621 261 39 0 chr17 22725629 22725809 -62712671 + MLT2F LTR ERVL 476 662 -1 296 129 113 32 chr17 22725866 22725928 -62712552 - MER5B DNA MER1_type 0 178 112 2344 81 0 0 chr17 22725929 22726236 -62712244 + AluY SINE Alu 1 307 -4 245 98 24 0 chr17 22726236 22726277 -62712203 + (GA)n Simple_repeat Simple_repeat 1 42 0 649 211 16 0 chr17 22726278 22726406 -62712074 - MER5B DNA MER1_type -48 130 1 194 319 0 0 chr17 22726713 22726760 -62711720 + L3 LINE CR1 1521 1567 -10 * 338 290 46 23 chr17 22726751 22726882 -62711598 + MIR3 SINE MIR 44 177 -31 1355 262 55 8 chr17 22726901 22727283 -62711197 - LTR16A LTR ERVL -21 429 30 2122 158 7 9 chr17 22727293 22727645 -62710835 - MLT1A1 LTR MaLR -11 446 1 2065 109 17 3 chr17 22728538 22728831 -62709649 + AluSx SINE Alu 1 297 -15 190 294 153 0 chr17 22729127 22729212 -62709268 - L2 LINE L2 -31 3241 3144 2228 160 11 6 chr17 22729220 22729583 -62708897 - MLT1A1 LTR MaLR 0 365 1 256 248 15 98 chr17 22731305 22731438 -62707042 - MIR SINE MIR -51 211 90 1744 214 98 37 chr17 22731448 22731930 -62706550 - MLT1J LTR MaLR 0 511 1 917 100 31 8 chr17 22731998 22732128 -62706352 - FLAM_C SINE Alu 0 133 1 2096 71 0 0 chr17 22732195 22732464 -62706016 - AluY SINE Alu -1 310 42 538 333 101 43 chr17 22732494 22732869 -62705611 - L3 LINE CR1 -1 1576 1180 237 222 0 0 chr17 22733216 22733261 -62705219 - MLT1J LTR MaLR -1 510 466 576 230 42 118 chr17 22733276 22733452 -62705028 - MLT1J LTR MaLR -119 496 308 2090 129 0 0 chr17 22733452 22733755 -62704725 - AluSx SINE Alu -8 304 2 576 230 42 118 chr17 22733755 22733887 -62704593 - MLT1J LTR MaLR -307 308 111 246 320 51 0 chr17 22733972 22734050 -62704430 + MIR3 SINE MIR 115 196 -12 2198 98 3 0 chr17 22734098 22734405 -62704075 + AluSq SINE Alu 1 308 -5 672 253 53 16 chr17 22734433 22734623 -62703857 + MIR SINE MIR 46 242 -20 1009 166 0 11 chr17 22735390 22735565 -62702915 + MLT1B LTR MaLR 1 173 -217 1258 141 0 0 chr17 22735565 22735756 -62702724 + AluJo SINE Alu 1 191 -121 236 77 26 0 chr17 22735777 22735816 -62702664 + (CAAAAA)n Simple_repeat Simple_repeat 2 41 0 1311 175 5 0 chr17 22735818 22736041 -62702439 + MLT1B LTR MaLR 167 390 0 3396 153 83 3 chr17 22736226 22736802 -62701678 + LTR26E LTR ERV1 1 622 0 1616 196 58 13 chr17 22736809 22737202 -62701278 - MER69 DNA AcHobo -27 2499 2089 * 2372 223 131 30 chr17 22737201 22737340 -62701140 - MER69 DNA AcHobo -1288 1238 1114 234 0 0 0 chr17 22737340 22737366 -62701114 + (TG)n Simple_repeat Simple_repeat 1 26 0 2372 223 131 30 chr17 22737366 22737926 -62700554 - MER69 DNA AcHobo -1412 1114 468 1098 228 123 9 chr17 22737928 22738426 -62700054 + MLT1G1 LTR MaLR 3 586 -9 534 262 49 43 chr17 22738435 22738599 -62699881 - MER69 DNA AcHobo -2054 472 308 1815 238 65 26 chr17 22738739 22739273 -62699207 - MLT1H1 LTR MaLR 0 555 1 1171 250 73 18 chr17 22739656 22739984 -62698496 - LTR16C LTR ERVL 0 491 146 392 320 129 6 chr17 22740620 22740798 -62697682 + MIR3 SINE MIR 9 208 0 554 128 13 0 chr17 22740940 22741018 -62697462 - Tigger7 DNA MER2_type -3 2484 2406 2356 173 41 3 chr17 22741038 22741425 -62697055 - Tigger7 DNA MER2_type -2085 402 1 287 185 0 0 chr17 22741804 22741829 -62696651 - MSTA LTR MaLR 0 428 404 2726 80 11 0 chr17 22741829 22742178 -62696302 - THE1A LTR MaLR -2 353 1 287 185 0 0 chr17 22742178 22742206 -62696274 - MSTA LTR MaLR -23 405 375 2324 124 59 8 chr17 22742234 22742605 -62695875 - MSTA LTR MaLR -38 390 1 419 270 217 17 chr17 22742716 22742946 -62695534 - MLT1L LTR MaLR -10 605 330 267 231 106 39 chr17 22743107 22743211 -62695269 - MLT1L LTR MaLR -356 259 149 200 296 0 0 chr17 22744200 22744254 -62694226 + GA-rich Low_complexity Low_complexity 2 55 0 2690 251 45 21 chr17 22744274 22745050 -62693430 + L1ME3A LINE L1 5371 6165 -5 501 155 62 21 chr17 22745261 22745358 -62693122 - MER69 DNA AcHobo -1125 101 1 531 220 47 33 chr17 22745358 22745508 -62692972 - MIR SINE MIR -5 257 106 1463 128 90 45 chr17 22745663 22745952 -62692528 - AluJo SINE Alu -10 302 1 215 309 0 0 chr17 22746303 22746358 -62692122 - L2 LINE L2 -10 3262 3208 423 297 100 17 chr17 22746446 22746646 -62691834 - MIR SINE MIR -37 225 15 1702 227 58 13 chr17 22746923 22747386 -62691094 - L1M4 LINE L1 -1721 4425 3942 547 218 44 92 chr17 22747841 22747922 -62690558 - L1MC4 LINE L1 -2 8040 7957 1153 198 40 125 chr17 22747922 22748321 -62690159 + MLT1A1 LTR MaLR 1 365 0 547 218 44 92 chr17 22748321 22748382 -62690098 - L1MC4 LINE L1 -85 7957 7895 387 165 13 0 chr17 22748382 22748461 -62690019 - MER116 DNA Mariner 0 80 1 547 218 44 92 chr17 22748461 22748610 -62689870 - L1MC4 LINE L1 -147 7895 7762 3156 179 7 11 chr17 22748620 22749157 -62689323 + MLT1F LTR MaLR 1 535 -7 597 222 9 0 chr17 22749408 22749516 -62688964 - MIR SINE MIR -153 109 1 580 218 123 74 chr17 22749964 22750032 -62688448 + LTR16C LTR ERVL 3 66 -425 1347 123 15 0 chr17 22750032 22750236 -62688244 + MER3 DNA MER1_type 3 209 0 580 218 123 74 chr17 22750236 22750600 -62687880 + LTR16C LTR ERVL 66 491 0 1541 185 3 23 chr17 22751258 22751566 -62686914 - AluJb SINE Alu -5 307 6 255 350 48 19 chr17 22752406 22752509 -62685971 - MIR SINE MIR -61 147 42 1584 198 91 39 chr17 22752640 22753049 -62685431 - LTR16C LTR ERVL 0 491 62 585 342 119 32 chr17 22753840 22754211 -62684269 - L2 LINE L2 -6 3266 2864 690 147 92 65 chr17 22754572 22754658 -62683822 + MER53 DNA DNA 1 83 -106 2101 102 7 0 chr17 22754658 22754953 -62683527 + AluSx SINE Alu 1 297 -15 690 147 92 65 chr17 22754953 22755050 -62683430 + MER53 DNA DNA 83 189 0 294 315 0 0 chr17 22755055 22755144 -62683336 + MLT1K LTR MaLR 144 232 -356 232 232 37 37 chr17 22755331 22755413 -62683067 + MLT1K LTR MaLR 468 549 -39 554 103 0 35 chr17 22755762 22755849 -62682631 - AluJo SINE Alu -8 304 221 1172 176 0 9 chr17 22755950 22756166 -62682314 - AluJo SINE Alu -98 214 1 312 206 11 98 chr17 22756321 22756413 -62682067 - MIR3 SINE MIR -17 191 108 441 289 177 10 chr17 22757437 22757658 -62680822 - MIR SINE MIR -6 256 3 1710 269 92 12 chr17 22757802 22758304 -62680176 - MLT1H1 LTR MaLR -2 553 12 1753 172 0 3 chr17 22758526 22758823 -62679657 - AluJo SINE Alu -16 296 1 1051 233 85 89 chr17 22759482 22759988 -62678492 - MLT1H1 LTR MaLR -11 544 41 1293 188 31 27 chr17 22760135 22760391 -62678089 - MIR SINE MIR 0 262 6 250 320 20 30 chr17 22760410 22760467 -62678013 - L2 LINE L2 -33 3239 3182 1383 255 45 55 chr17 22760467 22760981 -62677499 + MLT1J LTR MaLR 1 509 -2 250 320 20 30 chr17 22760981 22761023 -62677457 - L2 LINE L2 -90 3182 3141 5248 162 19 3 chr17 22762471 22763838 -62674642 - L1MB5 LINE L1 -8 6166 4778 5994 127 26 40 chr17 22763849 22764011 -62674469 - L1MC1 LINE L1 -88 6245 6082 902 133 0 22 chr17 22764011 22764146 -62674334 - FLAM_C SINE Alu 0 133 2 5994 127 26 40 chr17 22764146 22765053 -62673427 - L1MC1 LINE L1 -251 6082 5185 482 237 0 0 chr17 22765043 22765140 -62673340 - L1MC1 LINE L1 -1771 4375 4279 * 1957 120 0 33 chr17 22765201 22765502 -62672978 + AluSx SINE Alu 5 295 -17 570 243 269 36 chr17 22765502 22765807 -62672673 - MLT1K LTR MaLR -50 538 163 204 125 0 0 chr17 22765949 22765981 -62672499 + L2 LINE L2 3282 3313 0 2261 69 7 0 chr17 22766146 22766435 -62672045 - AluY SINE Alu -20 291 1 1740 224 89 14 chr17 22766944 22767315 -62671165 + MLT1G1 LTR MaLR 1 399 -196 296 164 180 0 chr17 22767327 22767388 -62671092 + MLT1F LTR MaLR 3 74 -468 259 282 129 0 chr17 22767554 22767639 -62670841 + MLT1F1 LTR MaLR 71 166 -401 1355 192 143 54 chr17 22767718 22768067 -62670413 + MLT1F1 LTR MaLR 188 567 0 650 253 13 26 chr17 22768082 22768236 -62670244 + MLT1G1 LTR MaLR 438 589 -6 1944 144 0 26 chr17 22768260 22768572 -62669908 + AluSx SINE Alu 1 304 -8 1425 157 5 0 chr17 22768647 22768870 -62669610 - MLT1B LTR MaLR 0 390 167 2114 80 0 0 chr17 22768895 22769159 -62669321 + THE1A LTR MaLR 1 264 -91 212 288 144 27 chr17 22770150 22770261 -62668219 + MIR SINE MIR 23 146 -62 332 264 91 77 chr17 22770313 22770359 -62668121 - MLT1L LTR MaLR -56 559 515 2011 128 0 25 chr17 22770359 22770678 -62667802 + AluJo SINE Alu 1 311 -1 332 264 91 77 chr17 22770678 22771032 -62667448 - MLT1L LTR MaLR -100 515 120 936 108 0 0 chr17 22771047 22771205 -62667275 + AluSg/x SINE Alu 153 310 0 180 309 12 48 chr17 22771938 22772022 -62666458 - MIR SINE MIR -77 185 105 724 209 7 0 chr17 22772547 22772700 -62665780 - MER74A LTR ERVL -124 434 281 407 277 173 14 chr17 22772884 22773104 -62665376 + LTR16A LTR ERVL 12 266 -184 2442 179 18 7 chr17 22773104 22773557 -62664923 - LTR32 LTR ERVL 0 471 14 477 256 158 6 chr17 22773575 22773739 -62664741 + LTR16A LTR ERVL 262 450 0 1926 182 81 74 chr17 22774903 22775439 -62663041 - MER74A LTR ERVL 0 558 16 1818 97 0 0 chr17 22775439 22775667 -62662813 + AluSg/x SINE Alu 77 304 -6 1926 182 81 74 chr17 22775667 22775684 -62662796 - MER74A LTR ERVL -542 16 1 408 247 60 23 chr17 22775764 22776005 -62662475 + L1MC4a LINE L1 5695 5821 -357 438 258 38 16 chr17 22776178 22776364 -62662116 - LTR16B LTR ERVL -144 320 131 223 313 179 0 chr17 22777016 22777128 -62661352 - L2 LINE L2 -216 3056 2925 2507 90 0 0 chr17 22777129 22777439 -62661041 + AluSq SINE Alu 1 310 -3 356 264 72 45 chr17 22777624 22777834 -62660646 - MLT1K LTR MaLR -229 386 183 360 250 190 67 chr17 22778656 22778904 -62659576 + MER5C DNA MER1_type 5 294 -30 207 0 0 0 chr17 22778904 22778927 -62659553 + (TA)n Simple_repeat Simple_repeat 1 23 0 360 250 190 67 chr17 22778927 22778962 -62659518 + MER5C DNA MER1_type 294 323 -1 361 298 57 117 chr17 22779062 22779431 -62659049 + L2 LINE L2 2918 3264 -8 2149 137 7 0 chr17 22779468 22779767 -62658713 + AluJb SINE Alu 1 301 -11 2056 109 43 31 chr17 22779772 22780121 -62658359 - L1MB3 LINE L1 -19 6164 5812 431 242 129 62 chr17 22780417 22780614 -62657866 + MIR SINE MIR 1 214 -48 1323 170 21 118 chr17 22780819 22781149 -62657331 + AluY SINE Alu 1 298 -13 658 249 55 67 chr17 22781379 22781797 -62656683 + LTR33 LTR ERVL 8 420 -101 288 208 13 13 chr17 22782393 22782470 -62656010 + MLT1K LTR MaLR 183 259 -329 203 278 0 0 chr17 22782534 22782588 -62655892 - L2 LINE L2 -34 3279 3226 664 241 37 7 chr17 22784155 22784499 -62653981 - MLT1J2 LTR MaLR 0 450 61 1509 165 0 21 chr17 22784641 22784884 -62653596 + AluJb SINE Alu 1 238 -74 1120 142 6 11 chr17 22784906 22785089 -62653391 + MLT1C LTR MaLR 283 464 -3 481 292 72 74 chr17 22785132 22785330 -62653150 - HAL1 LINE L1 -273 2234 2037 2004 120 39 11 chr17 22785330 22785613 -62652867 - AluSx SINE Alu -21 291 1 481 292 72 74 chr17 22785613 22785928 -62652552 - HAL1 LINE L1 -470 2037 1722 249 192 39 44 chr17 22785929 22786007 -62652473 - MLT1F1 LTR MaLR -2 585 496 1001 235 77 81 chr17 22786018 22786562 -62651918 - HAL1 LINE L1 -1965 542 1 11302 82 7 5 chr17 22787343 22788876 -62649604 + THE1A-int LTR MaLR 45 1580 0 2391 73 117 0 chr17 22788878 22789194 -62649286 + THE1A LTR MaLR 3 355 0 518 237 0 0 chr17 22789194 22789287 -62649193 - FLAM_A SINE Alu -49 93 1 785 208 22 17 chr17 22789287 22789465 -62649015 - MLT1B LTR MaLR -211 179 1 1008 207 0 0 chr17 22789533 22789702 -62648778 + FAM SINE Alu 2 170 -5 201 269 58 19 chr17 22790503 22790555 -62647925 - L2 LINE L2 -9 3304 3251 2239 117 7 0 chr17 22790847 22791146 -62647334 - AluSx SINE Alu -11 301 1 2276 108 0 0 chr17 22792593 22792889 -62645591 - AluJb SINE Alu -16 296 1 348 272 78 0 chr17 22793033 22793136 -62645344 - MIR SINE MIR -8 254 144 1469 186 35 22 chr17 22793140 22793592 -62644888 + MLT2B1 LTR ERVL 5 501 -19 282 96 0 137 chr17 22793604 22793677 -62644803 + MLT2B3 LTR ERVL 458 554 0 9844 181 33 12 chr17 22793678 22795342 -62643138 + ERVL-B3 LTR ERVL 2 1708 -4056 3900 74 10 10 chr17 22795342 22795855 -62642625 - LTR10D LTR ERV1 0 513 1 9844 181 33 12 chr17 22795855 22796032 -62642448 + ERVL-B3 LTR ERVL 1708 1880 -3884 243 109 43 22 chr17 22796032 22796078 -62642402 + MLT2B1 LTR ERVL 474 520 0 284 189 311 19 chr17 22796078 22796184 -62642296 - MIR SINE MIR -114 148 12 301 290 203 14 chr17 22796435 22796573 -62641907 + MIR3 SINE MIR 36 199 -9 1217 125 111 0 chr17 22796679 22796895 -62641585 - MSTB1 LTR MaLR -1 431 192 1092 126 0 0 chr17 22796896 22797093 -62641387 - AluSq SINE Alu 0 336 140 310 50 0 0 chr17 22797093 22797133 -62641347 - MSTB1 LTR MaLR -386 40 1 402 287 116 0 chr17 22797161 22797325 -62641155 + MIR SINE MIR 52 234 -28 221 368 0 43 chr17 22797730 22797915 -62640565 + (TATATG)n Simple_repeat Simple_repeat 3 179 0 1018 194 0 0 chr17 22797996 22798166 -62640314 + FRAM SINE Alu 1 170 -6 3332 200 46 47 chr17 22798379 22799167 -62639313 + L1MD2 LINE L1 4505 5292 -1067 2267 107 13 7 chr17 22799167 22799475 -62639005 + AluSg SINE Alu 1 310 0 3332 200 46 47 chr17 22799475 22800304 -62638176 + L1MD2 LINE L1 5292 6141 -218 240 35 0 0 chr17 22800364 22800393 -62638087 + (CA)n Simple_repeat Simple_repeat 1 29 0 494 272 122 9 chr17 22801023 22801236 -62637244 + L1ME4a LINE L1 5789 6025 -96 593 221 74 42 chr17 22802568 22802758 -62635722 - MLT1H1 LTR MaLR -350 205 10 400 277 36 0 chr17 22803206 22803318 -62635162 + MIR3 SINE MIR 87 202 -6 1454 236 102 63 chr17 22803977 22804544 -62633936 + MLT1G1 LTR MaLR 2 590 -5 517 294 27 38 chr17 22804576 22804760 -62633720 + MER5A DNA MER1_type 8 189 0 753 237 56 103 chr17 22804956 22805365 -62633115 + MLT1J LTR MaLR 122 511 0 406 284 153 27 chr17 22805775 22805958 -62632522 - MIR SINE MIR -29 233 28 1151 309 18 15 chr17 22806991 22807382 -62631098 + MLT1I LTR MaLR 1 392 -17 1422 116 50 12 chr17 22807603 22807862 -62630618 - L1MA4 LINE L1 -7 6293 6025 2371 130 0 12 chr17 22807864 22808202 -62630278 + MER1B DNA MER1_type 4 337 0 1990 140 0 0 chr17 22809221 22809500 -62628980 - AluJo SINE Alu -28 284 6 582 255 62 6 chr17 22809658 22809819 -62628661 - MIR SINE MIR -41 221 52 572 257 81 88 chr17 22809916 22810108 -62628372 + L2 LINE L2 2555 2747 -525 2140 118 7 23 chr17 22810108 22810413 -62628067 - AluSx SINE Alu -12 300 1 572 257 81 88 chr17 22810413 22810688 -62627792 + L2 LINE L2 2747 3019 -253 301 70 0 0 chr17 22810758 22810801 -62627679 - MADE1 DNA Mariner -37 43 1 2255 116 0 10 chr17 22811185 22811495 -62626985 - AluSx SINE Alu -5 307 1 249 209 0 0 chr17 22811664 22811707 -62626773 - L2 LINE L2 -17 3255 3213 1656 177 115 100 chr17 22811726 22811976 -62626504 - MLT1F1 LTR MaLR -2 565 320 2683 125 29 10 chr17 22811976 22812392 -62626088 - MSTB LTR MaLR -2 424 1 1656 177 115 100 chr17 22812392 22812673 -62625807 - MLT1F1 LTR MaLR -247 320 1 222 309 111 0 chr17 22812681 22812762 -62625718 - MIR SINE MIR -70 192 103 2451 140 12 31 chr17 22812762 22813125 -62625355 + MLT2C2 LTR ERVL 1 357 -107 2028 141 0 45 chr17 22813125 22813437 -62625043 + AluSx SINE Alu 1 298 -14 2451 140 12 31 chr17 22813437 22813486 -62624994 + MLT2C2 LTR ERVL 357 405 -59 246 62 0 0 chr17 22813490 22813522 -62624958 + (TCTA)n Simple_repeat Simple_repeat 3 34 0 1275 241 100 39 chr17 22813525 22814036 -62624444 + MER34 LTR ERV1 1 542 0 210 37 0 0 chr17 22814040 22814067 -62624413 + (CA)n Simple_repeat Simple_repeat 2 28 0 284 119 0 0 chr17 22814068 22814110 -62624370 + MLT2C2 LTR ERVL 356 397 0 196 261 22 0 chr17 22814112 22814158 -62624322 - MIR SINE MIR -157 105 59 1572 233 128 41 chr17 22814218 22814751 -62623729 + MLT1G1 LTR MaLR 1 579 -16 447 321 172 17 chr17 22814752 22814820 -62623660 - L2 LINE L2 -43 3270 3214 1952 174 49 3 chr17 22814820 22815165 -62623315 - MLT1A1 LTR MaLR -4 361 1 447 321 172 17 chr17 22815165 22815392 -62623088 - L2 LINE L2 -99 3214 2929 1580 149 54 0 chr17 22815516 22815757 -62622723 - AluJb SINE Alu -15 297 44 1700 179 0 43 chr17 22815757 22816080 -62622400 - AluJb SINE Alu -2 310 1 1607 217 32 11 chr17 22816972 22817345 -62621135 + L1ME3 LINE L1 5754 6134 -28 501 250 68 8 chr17 22817345 22817477 -62621003 + FLAM_A SINE Alu 2 141 -1 1626 204 6 12 chr17 22817685 22818013 -62620467 - MLT1A1 LTR MaLR 0 365 40 197 184 0 0 chr17 22918464 22918502 -62519978 + MIR SINE MIR 80 117 -145 522 233 136 17 chr17 22919191 22919367 -62519113 - MIR SINE MIR -26 236 40 263 312 11 11 chr17 22920175 22920268 -62518212 + (CGTG)n Simple_repeat Simple_repeat 2 94 0 381 93 0 0 chr17 22920285 22920339 -62518141 + (TG)n Simple_repeat Simple_repeat 1 54 0 201 39 0 0 chr17 22920450 22920476 -62518004 + (CGCGG)n Simple_repeat Simple_repeat 1 26 0 457 219 126 0 chr17 22920677 22920796 -62517684 + MIR3 SINE MIR 45 178 -30 192 333 11 33 chr17 22920961 22921051 -62517429 - MIR SINE MIR -126 136 49 303 284 53 0 chr17 22921119 22921214 -62517266 - MIR SINE MIR -78 184 85 203 321 62 0 chr17 22921427 22921508 -62516972 - MIR SINE MIR -93 169 84 181 255 0 20 chr17 22921979 22922030 -62516450 + MIR SINE MIR 99 148 -60 265 203 38 38 chr17 22922766 22922845 -62515635 + MIR SINE MIR 54 132 -76 194 311 104 47 chr17 22923078 22923184 -62515296 + MIR SINE MIR 6 117 -145 587 242 30 0 chr17 22923450 22923582 -62514898 + MIR SINE MIR 32 167 -95 585 294 82 5 chr17 22923852 22924036 -62514444 - MIR SINE MIR -1 261 64 254 250 91 11 chr17 22924474 22924562 -62513918 - MIR3 SINE MIR -52 156 62 347 324 94 0 chr17 22925034 22925204 -62513276 + LTR16C LTR ERVL 37 222 -269 530 208 113 0 chr17 22925236 22925395 -62513085 + LTR16C LTR ERVL 281 457 -34 232 157 0 48 chr17 22925484 22925567 -62512913 + CT-rich Low_complexity Low_complexity 1 79 0 255 347 0 10 chr17 22925774 22925872 -62512608 + (TGGA)n Simple_repeat Simple_repeat 2 98 0 333 230 19 14 chr17 22925885 22926104 -62512376 + (TGGA)n Simple_repeat Simple_repeat 1 220 0 456 313 23 0 chr17 22926510 22926638 -62511842 - MIR SINE MIR 0 262 132 854 177 9 0 chr17 22926756 22926998 -62511482 + (TGGA)n Simple_repeat Simple_repeat 1 244 0 204 238 0 0 chr17 22927552 22927594 -62510886 - MIR SINE MIR 0 262 221 1750 144 10 0 chr17 22927613 22927918 -62510562 - Tigger3(Golem) DNA MER2_type -1 3028 2721 261 289 53 0 chr17 22927916 22927992 -62510488 - Tigger3(Golem) DNA MER2_type -2947 82 3 * 229 196 161 0 chr17 22927997 22928053 -62510427 - MIR SINE MIR -91 171 107 253 172 35 0 chr17 22928857 22928914 -62509566 + MIR SINE MIR 98 155 -62 242 240 192 34 chr17 22930288 22930434 -62508046 - L2 LINE L2 -913 2401 2233 186 43 0 0 chr17 22930503 22930526 -62507954 + (GGA)n Simple_repeat Simple_repeat 1 23 0 204 302 70 31 chr17 22931149 22931278 -62507202 + L2 LINE L2 3174 3307 -6 194 328 15 0 chr17 22932349 22932416 -62506064 + MIR3 SINE MIR 88 155 -53 322 297 83 28 chr17 22932485 22932639 -62505841 - MIR3 SINE MIR -62 146 1 258 362 9 9 chr17 22932809 22932914 -62505566 + MIR SINE MIR 158 262 0 346 331 25 38 chr17 22933936 22934093 -62504387 - MIR SINE MIR -90 172 18 2292 44 4 0 chr17 22934103 22934378 -62504102 - AluY SINE Alu -1 310 35 1194 70 0 0 chr17 22934387 22934543 -62503937 - AluY SINE Alu 0 311 156 207 100 0 0 chr17 22934851 22934881 -62503599 + (TG)n Simple_repeat Simple_repeat 2 31 0 250 260 0 0 chr17 22934974 22935024 -62503456 - L2 LINE L2 -6 3307 3258 212 351 27 0 chr17 22935642 22935716 -62502764 - L2 LINE L2 0 3313 3238 186 314 0 0 chr17 22935733 22935784 -62502696 - MIR SINE MIR -112 150 100 766 279 105 3 chr17 22937601 22937934 -62500546 - MLT1K LTR MaLR -119 469 103 210 310 42 49 chr17 22939297 22939439 -62499041 - L2 LINE L2 -324 2989 2849 305 294 157 7 chr17 22940577 22940730 -62497750 - L2 LINE L2 -5 3267 3092 729 259 202 5 chr17 22940783 22941284 -62497196 + L2 LINE L2 2696 3311 -2 225 339 0 0 chr17 22941602 22941667 -62496813 + (TAGA)n Simple_repeat Simple_repeat 4 68 0 688 200 12 0 chr17 22941669 22941834 -62496646 + (TGGA)n Simple_repeat Simple_repeat 3 169 0 739 178 11 0 chr17 22941855 22942029 -62496451 + (TGGA)n Simple_repeat Simple_repeat 3 178 0 764 195 8 0 chr17 22942045 22942301 -62496179 + (TGGA)n Simple_repeat Simple_repeat 1 258 0 209 210 16 0 chr17 22942313 22942375 -62496105 + (TGGA)n Simple_repeat Simple_repeat 1 63 0 659 223 0 11 chr17 22942406 22942581 -62495899 + (TGGA)n Simple_repeat Simple_repeat 3 175 0 752 190 0 22 chr17 22942618 22942802 -62495678 + (TGGA)n Simple_repeat Simple_repeat 1 180 0 283 280 0 0 chr17 22942814 22942889 -62495591 + (TGGA)n Simple_repeat Simple_repeat 1 75 0 462 301 58 22 chr17 22942908 22943147 -62495333 - MIR SINE MIR 0 262 13 570 260 82 82 chr17 22943587 22943918 -62494562 - L2 LINE L2 -171 3142 2812 203 219 0 0 chr17 22944828 22944869 -62493611 - L3 LINE CR1 -114 1463 1423 274 224 93 19 chr17 22945347 22945461 -62493019 + MIR SINE MIR 25 144 -64 566 348 97 13 chr17 22946235 22946626 -62491854 - Charlie4a DNA MER1_type -59 449 26 837 243 6 6 chr17 22946747 22946920 -62491560 - MIR SINE MIR -70 192 20 267 141 0 0 chr17 22948368 22948416 -62490064 + MIR SINE MIR 100 148 -60 390 294 24 35 chr17 22949093 22949263 -62489217 + Charlie4a DNA MER1_type 280 447 -61 228 339 131 0 chr17 22949418 22949548 -62488932 - L2 LINE L2 -1 3271 3125 355 311 0 10 chr17 22950118 22950221 -62488259 - MIR SINE MIR -64 144 43 229 149 64 0 chr17 22950296 22950343 -62488137 + L2 LINE L2 3006 3055 -217 280 290 149 0 chr17 22951019 22951126 -62487354 + MIR SINE MIR 112 234 -28 639 265 93 0 chr17 22951274 22951478 -62487002 - LTR16C LTR ERVL -14 477 255 321 26 0 0 chr17 22951871 22951909 -62486571 + (CA)n Simple_repeat Simple_repeat 2 39 0 533 292 13 5 chr17 22952717 22952902 -62485578 - MIR SINE MIR -57 205 20 468 191 145 33 chr17 22952904 22953056 -62485424 - MIR SINE MIR -73 189 21 199 240 40 0 chr17 22953470 22953520 -62484960 + MIR SINE MIR 109 160 -102 226 356 0 0 chr17 22953651 22953738 -62484742 + MIR SINE MIR 61 147 -115 598 217 132 0 chr17 22954184 22954336 -62484144 + MIR SINE MIR 65 236 -26 879 124 147 23 chr17 22954390 22954567 -62483913 - AluSg/x SINE Alu 0 310 112 479 195 8 0 chr17 22954577 22954695 -62483785 + (TCCA)n Simple_repeat Simple_repeat 3 121 0 224 313 16 0 chr17 22957290 22957354 -62481126 + (CAG)n Simple_repeat Simple_repeat 3 67 0 288 261 14 0 chr17 22958356 22958425 -62480055 + L2 LINE L2 3200 3269 -3 1158 267 99 15 chr17 22959593 22960085 -62478395 + L2 LINE L2 2776 3310 -3 308 262 75 19 chr17 22960138 22960245 -62478235 - MIR SINE MIR -99 163 51 197 247 135 34 chr17 22961974 22962063 -62476417 - L2 LINE L2 -60 3253 3156 2558 45 0 10 chr17 22962946 22963258 -62475222 - AluY SINE Alu -2 309 1 193 200 0 0 chr17 22964071 22964106 -62474374 + MIR SINE MIR 117 151 -111 767 215 80 16 chr17 22964253 22964504 -62473976 - MLT1C LTR MaLR 0 467 201 736 178 178 7 chr17 22964530 22964682 -62473798 - AluJo SINE Alu -18 294 117 2165 121 0 0 chr17 22964682 22964987 -62473493 - AluSc SINE Alu -2 307 3 225 125 42 21 chr17 22964988 22965036 -62473444 - MLT1C LTR MaLR -218 172 124 270 258 26 53 chr17 22966131 22966282 -62472198 + (TCTG)n Simple_repeat Simple_repeat 2 148 0 1083 316 83 16 chr17 22966528 22967104 -62471376 - L1ME1 LINE L1 -9 6157 5543 202 200 0 55 chr17 22967364 22967419 -62471061 + (CCCCAG)n Simple_repeat Simple_repeat 2 53 0 272 154 123 31 chr17 22967584 22967649 -62470831 - MIR SINE MIR -105 157 87 392 230 9 0 chr17 22968292 22968405 -62470075 + Charlie4 DNA MER1_type 1780 1893 -68 373 225 18 45 chr17 22968658 22968769 -62469711 - L2 LINE L2 -15 3298 3191 306 359 44 0 chr17 22968901 22969060 -62469420 + L2 LINE L2 2914 3079 -193 228 242 242 0 chr17 22969568 22969663 -62468817 - MIR SINE MIR -61 147 30 408 302 171 16 chr17 22969956 22970478 -62468002 - L2 LINE L2 -14 3258 2657 193 308 125 14 chr17 22970704 22970851 -62467629 + MIR3 SINE MIR 1 160 -63 392 325 43 27 chr17 22971148 22971336 -62467144 - MIR SINE MIR -25 237 47 312 27 0 0 chr17 22972949 22972986 -62465494 + (CA)n Simple_repeat Simple_repeat 1 37 0 180 0 0 0 chr17 22973204 22973224 -62465256 + (TAAA)n Simple_repeat Simple_repeat 3 22 0 220 279 266 28 chr17 22977117 22977575 -62460905 + L2 LINE L2 2361 2927 -387 2054 112 0 6 chr17 22977677 22977989 -62460491 - MER9 LTR ERVK -201 310 1 237 328 123 8 chr17 22979772 22979894 -62458586 - MIR SINE MIR -60 202 67 2927 127 4 15 chr17 22980438 22980896 -62457584 - L1PA16 LINE L1 -9 6157 5705 191 319 52 52 chr17 22981134 22981250 -62457230 - L2 LINE L2 -15 3298 3183 996 222 36 64 chr17 22983284 22983548 -62454932 + MLT1E1 LTR MaLR 2 255 -399 1766 127 79 7 chr17 22983548 22983839 -62454641 + AluJb SINE Alu 1 312 0 996 222 36 64 chr17 22983839 22983934 -62454546 + MLT1E1 LTR MaLR 255 351 -303 222 345 138 0 chr17 22984196 22984283 -62454197 - MIR SINE MIR -8 254 156 181 338 62 0 chr17 22984271 22984351 -62454129 - MIR3 SINE MIR -12 196 112 * 21 36 0 0 chr17 22985618 22985646 -62452834 + AT_rich Low_complexity Low_complexity 1 28 0 327 274 0 62 chr17 22987969 22988148 -62450332 + C-rich Low_complexity Low_complexity 5 172 0 304 262 11 78 chr17 22988209 22988400 -62450080 + C-rich Low_complexity Low_complexity 1 178 0 280 207 0 24 chr17 22989267 22989349 -62449131 + (CGGGG)n Simple_repeat Simple_repeat 4 83 0 3620 57 4 2 chr17 22989439 22989896 -62448584 - L1PA6 LINE L1 -5 6149 5692 1035 155 39 6 chr17 22991174 22991355 -62447125 + AluJo SINE Alu 81 267 -45 373 175 25 33 chr17 22991357 22991477 -62447003 + GA-rich Low_complexity Low_complexity 2 120 0 307 216 68 11 chr17 22992021 22992133 -62446347 - L1MD3 LINE L1 0 8041 7897 904 324 56 12 chr17 22992480 22992980 -62445500 - MER90 LTR ERV1 -23 591 70 828 156 0 22 chr17 22994279 22994414 -62444066 + FLAM_C SINE Alu 2 133 0 26 30 0 0 chr17 22994468 22994501 -62443979 + AT_rich Low_complexity Low_complexity 1 33 0 1739 169 13 26 chr17 22994691 22995004 -62443476 - AluJo SINE Alu -2 310 2 305 341 116 57 chr17 22995118 22995505 -62442975 - L1M4 LINE L1 -1485 4661 4252 441 202 10 0 chr17 22998695 22998794 -62439686 - MER65C LTR ERV1 0 461 362 185 297 261 28 chr17 23001534 23002005 -62436475 + L2 LINE L2 2347 2927 -387 2105 134 0 0 chr17 23002215 23002513 -62435967 - AluSq SINE Alu 0 313 16 244 359 26 8 chr17 23003394 23003511 -62434969 - MIR SINE MIR -117 145 27 333 257 0 0 chr17 23003801 23003871 -62434609 - MIR SINE MIR -142 120 51 369 301 56 14 chr17 23004962 23005105 -62433375 - MIR3 SINE MIR -4 204 56 585 294 82 5 chr17 23005739 23005923 -62432557 - MIR SINE MIR -1 261 64 269 242 66 22 chr17 23006361 23006452 -62432028 - MIR3 SINE MIR -52 156 62 329 306 116 0 chr17 23006970 23007091 -62431389 + LTR16C LTR ERVL 88 222 -269 528 208 113 0 chr17 23007123 23007282 -62431198 + LTR16C LTR ERVL 281 457 -34 228 86 0 0 chr17 23007419 23007454 -62431026 + (TCC)n Simple_repeat Simple_repeat 1 35 0 344 239 17 17 chr17 23007744 23007992 -62430488 + (TGGA)n Simple_repeat Simple_repeat 1 248 0 456 320 23 0 chr17 23008398 23008526 -62429954 - MIR SINE MIR 0 262 132 844 166 6 12 chr17 23008649 23008994 -62429486 + (TGGA)n Simple_repeat Simple_repeat 1 343 0 778 191 5 5 chr17 23009006 23009228 -62429252 + (TGGA)n Simple_repeat Simple_repeat 1 222 0 579 209 11 6 chr17 23009242 23009419 -62429061 + (TGGA)n Simple_repeat Simple_repeat 1 178 0 830 184 6 0 chr17 23009441 23009620 -62428860 + (TGGA)n Simple_repeat Simple_repeat 1 180 0 457 219 126 0 chr17 23010061 23010180 -62428300 + MIR3 SINE MIR 45 178 -30 306 125 0 0 chr17 23010324 23010372 -62428108 + (TGGA)n Simple_repeat Simple_repeat 3 50 0 282 295 53 0 chr17 23010520 23010615 -62427865 - MIR SINE MIR -78 184 85 182 371 52 9 chr17 23010853 23010969 -62427511 - MIR SINE MIR -66 142 22 287 193 26 97 chr17 23012131 23012245 -62426235 + MIR SINE MIR 27 132 -76 208 302 104 47 chr17 23012478 23012584 -62425896 + MIR SINE MIR 6 117 -145 697 264 24 0 chr17 23012850 23013017 -62425463 + MIR SINE MIR 32 202 -60 309 318 93 23 chr17 23013386 23013515 -62424965 + L1M4 LINE L1 5194 5331 -815 273 196 0 0 chr17 23014550 23014606 -62423874 + (CA)n Simple_repeat Simple_repeat 1 56 0 339 290 32 0 chr17 23014922 23015015 -62423465 + MIR SINE MIR 122 217 -45 489 313 218 2 chr17 23015413 23015812 -62422668 + L2 LINE L2 2829 3313 0 233 143 0 0 chr17 23016715 23016757 -62421723 - ORSL DNA AcHobo -20 255 214 897 198 5 0 chr17 23017067 23017513 -62420967 + (TGGA)n Simple_repeat Simple_repeat 1 448 0 234 128 0 0 chr17 23017551 23017590 -62420890 + (TGGA)n Simple_repeat Simple_repeat 1 39 0 244 293 37 0 chr17 23017614 23017696 -62420784 + (TGGA)n Simple_repeat Simple_repeat 2 86 0 1343 56 0 0 chr17 23017753 23017947 -62420533 - AluY SINE Alu 0 314 121 287 224 53 0 chr17 23017951 23018027 -62420453 - ORSL DNA AcHobo -195 80 1 206 264 0 0 chr17 23018120 23018173 -62420307 + L2 LINE L2 2918 2970 -302 301 274 21 11 chr17 23018638 23018733 -62419747 + MIR SINE MIR 58 153 -109 261 0 0 0 chr17 23019190 23019219 -62419261 + (TTCA)n Simple_repeat Simple_repeat 2 30 0 620 305 116 42 chr17 23019220 23019755 -62418725 - L2 LINE L2 -20 3293 2706 2213 111 3 0 chr17 23019767 23020073 -62418407 - AluSg SINE Alu -2 308 2 239 193 0 0 chr17 23020081 23020138 -62418342 - L1MB5 LINE L1 0 6174 6118 777 186 0 0 chr17 23020138 23020256 -62418224 + FLAM_C SINE Alu 1 118 -25 864 145 112 0 chr17 23020260 23020439 -62418041 - L1MB5 LINE L1 -31 6143 5945 539 206 92 0 chr17 23020460 23020591 -62417889 + L2 LINE L2 3171 3313 0 822 311 28 6 chr17 23020608 23020926 -62417554 - L1MB5 LINE L1 -237 5937 5613 190 327 77 0 chr17 23021662 23021766 -62416714 + MIR3 SINE MIR 82 193 -15 256 276 59 74 chr17 23022115 23022318 -62416162 + L2 LINE L2 2858 3057 -215 318 335 58 19 chr17 23022610 23022816 -62415664 + L1MC4a LINE L1 5734 5947 -1861 1685 152 0 37 chr17 23022820 23023142 -62415338 + AluJo SINE Alu 3 312 0 215 264 11 23 chr17 23023827 23023914 -62414566 + (TATG)n Simple_repeat Simple_repeat 4 89 0 268 284 4 8 chr17 23023915 23024177 -62414303 + (TG)n Simple_repeat Simple_repeat 1 261 0 180 426 0 0 chr17 23024701 23024769 -62413711 - L2 LINE L2 -91 3181 3114 395 276 118 8 chr17 23024794 23025124 -62413356 - LTR33A LTR ERVL -3 792 152 292 238 0 0 chr17 23025614 23025677 -62412803 - MIR SINE MIR -110 152 90 617 254 270 18 chr17 23026220 23026550 -62411930 + L2 LINE L2 2898 3310 -3 283 315 36 0 chr17 23026637 23026748 -62411732 + MIR SINE MIR 36 150 -58 232 323 125 0 chr17 23027445 23027541 -62410939 + MIR SINE MIR 29 136 -72 1533 240 83 36 chr17 23027738 23028227 -62410253 + L1MB5 LINE L1 5621 6138 -36 2381 85 0 0 chr17 23028227 23028534 -62409946 + AluSx SINE Alu 1 307 -5 1533 240 83 36 chr17 23028534 23028573 -62409907 + L1MB5 LINE L1 6138 6174 0 557 309 76 34 chr17 23029101 23029337 -62409143 + MIR SINE MIR 6 251 -11 446 275 0 0 chr17 23029569 23029736 -62408744 + (CA)n Simple_repeat Simple_repeat 1 167 0 455 325 26 0 chr17 23030361 23030515 -62407965 + MIR SINE MIR 27 184 -78 186 238 270 0 chr17 23030528 23030591 -62407889 + MIR SINE MIR 65 144 -118 506 315 21 0 chr17 23031063 23031206 -62407274 - MIR SINE MIR -22 240 95 457 280 217 6 chr17 23031347 23031522 -62406958 + MIR SINE MIR 39 250 -12 641 293 37 33 chr17 23031922 23032137 -62406343 + MIR SINE MIR 8 223 -39 514 261 114 23 chr17 23032195 23032371 -62406109 + MIR SINE MIR 37 228 -34 2164 108 3 0 chr17 23033100 23033396 -62405084 - AluSq SINE Alu -16 297 1 583 272 86 8 chr17 23033635 23033891 -62404589 + MLT1H LTR MaLR 15 328 -221 350 206 147 0 chr17 23033916 23034018 -62404462 + MLT1H LTR MaLR 433 549 0 2009 107 0 0 chr17 23034123 23034394 -62404086 + AluSc SINE Alu 1 271 -38 2315 74 0 7 chr17 23034439 23034735 -62403745 + AluSx SINE Alu 1 294 -18 257 261 52 43 chr17 23035077 23035192 -62403288 + L2 LINE L2 2889 3004 -268 228 338 60 26 chr17 23035266 23035417 -62403063 + L2 LINE L2 3028 3183 -89 255 317 139 34 chr17 23035675 23035883 -62402597 + MIR SINE MIR 33 262 0 689 201 45 13 chr17 23035913 23036067 -62402413 - MIR SINE MIR -81 181 23 459 0 0 0 chr17 23036835 23036886 -62401594 + (CA)n Simple_repeat Simple_repeat 1 51 0 550 276 96 62 chr17 23036918 23037018 -62401462 + MLT1L LTR MaLR 4 99 -516 777 274 41 0 chr17 23037018 23037215 -62401265 - MER3 DNA MER1_type 0 209 5 550 276 96 62 chr17 23037215 23037530 -62400950 + MLT1L LTR MaLR 99 433 -182 421 356 150 10 chr17 23037685 23037991 -62400489 + L2 LINE L2 2924 3272 0 2293 137 78 12 chr17 23038198 23038606 -62399874 + L1MB3 LINE L1 5747 6181 -2 2428 188 115 28 chr17 23038629 23039237 -62399243 + MER21B LTR ERV1 1 661 -202 4206 128 5 82 chr17 23039237 23040085 -62398395 - LTR39 LTR ERV1 0 783 2 760 139 191 6 chr17 23040087 23040260 -62398220 + MER21B LTR ERV1 659 863 0 2241 75 0 0 chr17 23040712 23041037 -62397443 + AluY SINE Alu 1 325 0 347 271 118 26 chr17 23041298 23041527 -62396953 + L1MC5 LINE L1 5530 5779 -342 2399 74 3 0 chr17 23041565 23041875 -62396605 + AluY SINE Alu 1 311 0 696 309 11 28 chr17 23041885 23042247 -62396233 + L1PB1 LINE L1 5479 5834 -317 * 1900 207 152 26 chr17 23041922 23042502 -62395978 + L1ME1 LINE L1 5509 6161 -5 2264 78 0 0 chr17 23042551 23042861 -62395619 + AluSq SINE Alu 1 310 0 419 294 38 16 chr17 23042907 23043091 -62395389 - MLT1J2 LTR MaLR 0 450 263 1929 138 37 0 chr17 23044234 23044531 -62393949 + AluJb SINE Alu 1 308 -4 253 282 0 42 chr17 23044593 23044664 -62393816 + polypurine Low_complexity Low_complexity 3 70 0 514 327 94 72 chr17 23044795 23045472 -62393008 + HAL1b LINE L1 710 1105 -945 273 350 45 12 chr17 23045473 23045719 -62392761 + HAL1 LINE L1 1451 1704 -803 372 342 38 93 chr17 23045740 23046326 -62392154 + HAL1b LINE L1 1367 4158 -386 1563 169 37 4 chr17 23046355 23046653 -62391827 + AluJo SINE Alu 11 317 0 267 283 65 0 chr17 23046658 23046796 -62391684 + L1MC5 LINE L1 5846 5992 -1816 1817 251 48 6 chr17 23046797 23047319 -62391161 - MLT1H1 LTR MaLR 0 555 12 2233 253 106 86 chr17 23047367 23047543 -62390937 + L1MC5 LINE L1 6041 6212 -1749 2221 103 3 0 chr17 23047543 23047835 -62390645 - AluSg SINE Alu -17 293 1 2233 253 106 86 chr17 23047835 23048199 -62390281 + L1MC5 LINE L1 6212 6567 -1394 1845 173 7 3 chr17 23048199 23048506 -62389974 + AluSx SINE Alu 1 308 -4 2233 253 106 86 chr17 23048506 23049811 -62388669 + L1MC5 LINE L1 6567 7917 -44 337 280 62 83 chr17 23050015 23050208 -62388272 + L1ME LINE L1 5528 5716 -405 349 218 13 0 chr17 23050962 23051040 -62387440 + MLT1J LTR MaLR 98 176 -335 233 220 51 0 chr17 23051120 23051179 -62387301 + MLT1J LTR MaLR 413 474 -37 2133 77 3 7 chr17 23051181 23051492 -62386988 - AluSx SINE Alu 0 310 1 611 252 81 13 chr17 23051583 23051817 -62386663 - LTR16A1 LTR ERVL 0 457 208 246 270 0 14 chr17 23052289 23052363 -62386117 - MIR SINE MIR -76 132 60 466 212 71 0 chr17 23052629 23052742 -62385738 - LTR16C LTR ERVL -74 417 297 410 294 149 0 chr17 23053230 23053424 -62385056 - MIR SINE MIR -9 253 31 253 344 74 0 chr17 23053509 23053631 -62384849 + L2 LINE L2 2710 2840 -474 23 54 0 0 chr17 23053666 23053703 -62384777 + AT_rich Low_complexity Low_complexity 1 37 0 190 294 29 15 chr17 23053882 23053950 -62384530 + L2 LINE L2 3224 3292 -21 191 240 80 48 chr17 23054281 23054406 -62384074 + MIR3 SINE MIR 3 131 -77 278 305 29 0 chr17 23054652 23054757 -62383723 + L3 LINE CR1 1427 1534 -43 1179 179 54 68 chr17 23054856 23054907 -62383573 - MSTD LTR MaLR 0 396 346 1687 160 48 10 chr17 23054907 23055201 -62383279 - AluJo SINE Alu -7 305 1 1179 179 54 68 chr17 23055201 23055502 -62382978 - MSTD LTR MaLR -50 346 49 2207 111 0 9 chr17 23056347 23056662 -62381818 - AluSx SINE Alu 0 312 1 195 341 73 0 chr17 23057529 23057611 -62380869 - L2 LINE L2 0 3313 3226 515 268 61 48 chr17 23057620 23057851 -62380629 - L2 LINE L2 -193 3120 2887 325 243 91 44 chr17 23058420 23058573 -62379907 + MIR SINE MIR 31 189 -19 27 0 0 0 chr17 23058921 23058948 -62379532 + AT_rich Low_complexity Low_complexity 1 27 0 21 36 0 0 chr17 23059011 23059039 -62379441 + AT_rich Low_complexity Low_complexity 1 28 0 498 234 154 37 chr17 23060140 23060354 -62378126 + L2 LINE L2 2815 3053 -219 2242 70 7 20 chr17 23061213 23061512 -62376968 - AluSg SINE Alu -15 295 1 421 356 31 22 chr17 23061550 23061772 -62376708 - L1M4 LINE L1 -3472 2674 2451 284 240 13 0 chr17 23062282 23062357 -62376123 + Charlie8 DNA MER1_type 108 183 -2234 405 0 0 0 chr17 23062493 23062538 -62375942 + (CA)n Simple_repeat Simple_repeat 2 46 0 2132 121 3 13 chr17 23063836 23064151 -62374329 + AluSp SINE Alu 1 312 -1 22 35 0 0 chr17 23064200 23064229 -62374251 + AT_rich Low_complexity Low_complexity 1 29 0 2004 118 31 0 chr17 23064241 23064530 -62373950 + AluSg SINE Alu 1 298 -12 39 50 0 0 chr17 23064555 23064615 -62373865 + AT_rich Low_complexity Low_complexity 1 60 0 796 255 166 9 chr17 23064796 23065232 -62373248 + MLT1H1 LTR MaLR 7 555 0 22 35 0 0 chr17 23065523 23065552 -62372928 + AT_rich Low_complexity Low_complexity 1 29 0 2230 103 7 0 chr17 23065696 23065988 -62372492 + AluSx SINE Alu 1 294 -18 2238 109 3 0 chr17 23065988 23066299 -62372181 + AluSx SINE Alu 1 312 0 1235 119 0 0 chr17 23066299 23066475 -62372005 + AluSg/x SINE Alu 135 310 -2 182 257 195 0 chr17 23066547 23066660 -62371820 + L2 LINE L2 2813 2947 -367 1900 232 102 43 chr17 23066801 23067061 -62371419 + MER21B LTR ERV1 17 260 -603 1839 168 0 0 chr17 23067061 23067347 -62371133 + AluJo SINE Alu 5 290 -22 1900 232 102 43 chr17 23067347 23067360 -62371120 + MER21B LTR ERV1 260 271 -592 2037 127 14 0 chr17 23067360 23067651 -62370829 + AluSx SINE Alu 1 295 -17 1900 232 102 43 chr17 23067651 23068069 -62370411 + MER21B LTR ERV1 271 750 -113 390 276 103 37 chr17 23070446 23070660 -62367820 + L1ME2 LINE L1 5926 6153 -11 228 35 0 0 chr17 23072060 23072089 -62366391 + (CCCCAG)n Simple_repeat Simple_repeat 6 34 0 247 376 0 0 chr17 23072905 23072998 -62365482 - MIR SINE MIR -71 191 99 375 319 57 0 chr17 23073694 23073835 -62364645 + MIR SINE MIR 48 196 -66 406 304 99 6 chr17 23073917 23074078 -62364402 - L2 LINE L2 -2 3311 3136 2102 116 3 0 chr17 23074138 23074431 -62364049 - AluSq SINE Alu -19 294 1 1834 143 10 7 chr17 23074431 23074731 -62363749 - AluJb SINE Alu -11 301 1 266 309 146 8 chr17 23075894 23076017 -62362463 + MIR3 SINE MIR 4 143 -65 246 32 0 0 chr17 23077191 23077222 -62361258 + (CAG)n Simple_repeat Simple_repeat 1 31 0 363 280 77 0 chr17 23077426 23077572 -62360908 - MIR SINE MIR -62 146 30 205 331 55 69 chr17 23077826 23077971 -62360509 + MIR SINE MIR 77 219 -43 254 297 94 31 chr17 23078868 23079060 -62359420 + L2 LINE L2 2821 3024 -248 448 237 141 0 chr17 23079189 23079324 -62359156 + MIR SINE MIR 22 175 -87 466 229 28 0 chr17 23081027 23081197 -62357283 - MIR SINE MIR -7 255 111 872 158 0 0 chr17 23081337 23081470 -62357010 + AluJo/FLAM SINE Alu 1 133 -169 1416 144 98 46 chr17 23081471 23081756 -62356724 + AluJb SINE Alu 13 312 0 348 358 15 15 chr17 23082296 23082430 -62356050 + MIR SINE MIR 85 218 -44 809 93 8 0 chr17 23082745 23082874 -62355606 + (TATTG)n Simple_repeat Simple_repeat 2 131 0 2212 66 3 7 chr17 23082876 23083163 -62355317 - AluY SINE Alu -25 286 1 1517 144 38 15 chr17 23083166 23083429 -62355051 - AluJb SINE Alu -17 295 27 433 279 109 0 chr17 23085118 23085265 -62353215 - MIR SINE MIR -53 209 47 359 237 101 9 chr17 23085495 23085612 -62352868 - MIR SINE MIR -68 140 13 370 225 111 1 chr17 23087028 23087149 -62351331 + MIR SINE MIR 30 162 -46 324 302 33 70 chr17 23087919 23088134 -62350346 - MIR SINE MIR -19 243 37 303 130 0 0 chr17 23089313 23089367 -62349113 + (CGG)n Simple_repeat Simple_repeat 3 56 0 228 235 110 22 chr17 23092985 23093121 -62345359 - L1ME1 LINE L1 -30 6136 5989 318 264 9 52 chr17 23093136 23093252 -62345228 - L1ME1 LINE L1 -222 5946 5834 2281 79 7 0 chr17 23093430 23093733 -62344747 + AluY SINE Alu 1 305 -6 228 186 0 0 chr17 23093733 23093776 -62344704 + L1 LINE L1 5162 5204 -942 2002 100 0 7 chr17 23093776 23094066 -62344414 + AluY SINE Alu 1 288 -23 435 242 0 0 chr17 23094094 23094218 -62344262 + L1 LINE L1 5199 5322 -824 1141 125 0 0 chr17 23095016 23095176 -62343304 - AluSx SINE Alu -147 165 6 1824 81 0 0 chr17 23095950 23096186 -62342294 + AluY SINE Alu 2 237 -74 504 212 7 157 chr17 23096340 23096403 -62342077 - L1ME1 LINE L1 -949 5197 5126 2015 126 0 7 chr17 23096403 23096697 -62341783 - AluSx SINE Alu -20 292 1 504 212 7 157 chr17 23096697 23096813 -62341667 - L1ME1 LINE L1 -1020 5126 5080 2236 94 0 22 chr17 23096813 23097131 -62341349 - AluY SINE Alu 0 311 1 504 212 7 157 chr17 23097131 23097256 -62341224 - L1ME1 LINE L1 -1066 5080 4938 2241 87 3 0 chr17 23097326 23097615 -62340865 - AluSx SINE Alu -22 290 1 619 140 0 11 chr17 23097615 23097708 -62340772 - AluSq/x SINE Alu -172 141 50 480 258 11 34 chr17 23097932 23098110 -62340370 + L1MC4 LINE L1 7865 8038 -4 249 302 151 16 chr17 23098393 23098519 -62339961 - MIR3 SINE MIR -51 157 15 302 0 0 26 chr17 23098781 23098820 -62339660 + (TTTAA)n Simple_repeat Simple_repeat 3 40 0 325 151 38 0 chr17 23098856 23098909 -62339571 - MER66B LTR ERV1 -142 344 290 608 302 88 74 chr17 23098924 23099141 -62339339 - L1ME4a LINE L1 -202 5919 5692 2010 126 24 0 chr17 23099141 23099435 -62339045 - AluSq SINE Alu -12 301 1 608 302 88 74 chr17 23099435 23099624 -62338856 - L1ME4a LINE L1 -429 5692 5507 2240 68 3 59 chr17 23099752 23100075 -62338405 - AluSc SINE Alu -4 305 1 1529 188 49 0 chr17 23100287 23100574 -62337906 + AluJo SINE Alu 3 303 -9 778 150 7 54 chr17 23101170 23101317 -62337163 + FLAM_C SINE Alu 2 141 -2 1857 130 32 0 chr17 23101394 23101678 -62336802 + AluSx SINE Alu 1 293 -19 921 104 0 0 chr17 23101816 23101941 -62336539 + AluSp SINE Alu 1 125 -188 877 164 77 5 chr17 23101946 23102141 -62336339 - MER41-int LTR ERV1 -2998 2948 2740 * 882 138 66 18 chr17 23102139 23102364 -62336116 - MER41-int LTR ERV1 -2443 2572 1835 * 1250 223 21 13 chr17 23102359 23102664 -62335816 - MER41-int LTR ERV1 -3592 2354 1235 893 85 78 0 chr17 23103693 23103822 -62334658 + MER85 DNA T2_type 1 139 0 237 282 18 18 chr17 23103997 23104107 -62334373 + GA-rich Low_complexity Low_complexity 2 111 0 535 264 65 87 chr17 23105295 23105946 -62332534 - HSREP522 Satellite telomeric -99 636 1 2509 238 100 96 chr17 23107057 23107397 -62331083 + L1MC5 LINE L1 6278 6615 -1346 1847 161 7 0 chr17 23107397 23107695 -62330785 + AluSx SINE Alu 3 302 -10 2509 238 100 96 chr17 23107695 23109007 -62329473 + L1MC5 LINE L1 6615 7917 -44 243 245 85 101 chr17 23109216 23109404 -62329076 + L1ME LINE L1 5532 5716 -405 397 205 13 0 chr17 23110158 23110236 -62328244 + MLT1J LTR MaLR 98 176 -335 233 222 28 130 chr17 23110316 23110377 -62328103 + MLT1J LTR MaLR 413 461 -50 2102 67 7 7 chr17 23110377 23110683 -62327797 - AluSx SINE Alu 0 306 1 233 222 28 130 chr17 23110683 23110728 -62327752 + MLT1J LTR MaLR 461 509 -2 672 261 77 13 chr17 23110774 23111008 -62327472 - LTR16A1 LTR ERVL 0 457 209 255 267 0 13 chr17 23111483 23111558 -62326922 - MIR SINE MIR -131 131 58 543 232 195 22 chr17 23111775 23111960 -62326520 - LTR16C LTR ERVL -9 482 266 374 271 115 36 chr17 23112430 23112622 -62325858 - MIR SINE MIR -9 253 47 249 336 74 0 chr17 23112710 23112832 -62325648 + L2 LINE L2 2710 2840 -474 23 54 0 0 chr17 23112867 23112904 -62325576 + AT_rich Low_complexity Low_complexity 1 37 0 191 290 29 14 chr17 23113083 23113152 -62325328 + L2 LINE L2 3224 3293 -20 197 224 80 48 chr17 23113486 23113611 -62324869 + MIR3 SINE MIR 3 131 -77 276 295 29 0 chr17 23113857 23113962 -62324518 + L3 LINE CR1 1427 1534 -43 1238 187 54 68 chr17 23114061 23114112 -62324368 - MSTD LTR MaLR 0 396 346 1622 165 47 10 chr17 23114112 23114409 -62324071 - AluJo SINE Alu -4 308 1 1238 187 54 68 chr17 23114409 23114710 -62323770 - MSTD LTR MaLR -50 346 49 2170 111 0 9 chr17 23115572 23115887 -62322593 - AluSx SINE Alu 0 312 1 228 67 0 0 chr17 23116713 23116743 -62321737 + (TCCC)n Simple_repeat Simple_repeat 3 32 0 193 312 78 0 chr17 23116760 23116837 -62321643 - L2 LINE L2 -5 3308 3226 491 268 61 48 chr17 23116849 23117077 -62321403 - L2 LINE L2 -196 3117 2887 316 301 44 9 chr17 23117646 23117759 -62320721 + MIR SINE MIR 31 147 -115 22 0 0 0 chr17 23118147 23118169 -62320311 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr17 23118232 23118260 -62320220 + AT_rich Low_complexity Low_complexity 1 28 0 478 211 189 11 chr17 23119405 23119585 -62318895 + L2 LINE L2 2842 3053 -219 227 175 0 0 chr17 23120317 23120357 -62318123 - Alu SINE Alu -268 40 1 2132 87 7 20 chr17 23120444 23120742 -62317738 - AluSg SINE Alu -16 294 1 385 337 41 25 chr17 23120786 23120982 -62317498 - L1M4 LINE L1 -3478 2668 2470 273 240 13 0 chr17 23121513 23121588 -62316892 + Charlie8 DNA MER1_type 97 172 -2245 297 0 0 0 chr17 23121727 23121760 -62316720 + (CA)n Simple_repeat Simple_repeat 2 34 0 2105 132 3 13 chr17 23123062 23123366 -62315114 + AluSp SINE Alu 1 301 -12 22 35 0 0 chr17 23123404 23123433 -62315047 + AT_rich Low_complexity Low_complexity 1 29 0 2097 125 28 0 chr17 23123445 23123734 -62314746 + AluSg SINE Alu 1 297 -13 180 109 36 18 chr17 23123764 23123819 -62314661 + (TATAA)n Simple_repeat Simple_repeat 1 56 0 765 231 193 64 chr17 23123962 23124433 -62314047 + MLT1H1 LTR MaLR 19 555 0 2295 119 7 0 chr17 23124895 23125197 -62313283 + AluSx SINE Alu 1 304 -8 2285 116 0 0 chr17 23125197 23125499 -62312981 + AluSx SINE Alu 1 302 -10 1276 125 0 0 chr17 23125501 23125677 -62312803 + AluSg/x SINE Alu 135 310 -2 1940 229 100 49 chr17 23126003 23126267 -62312213 + MER21B LTR ERV1 17 266 -597 1816 170 3 0 chr17 23126267 23126550 -62311930 + AluJo SINE Alu 7 290 -22 1940 229 100 49 chr17 23126550 23126563 -62311917 + MER21B LTR ERV1 266 277 -586 2123 128 14 0 chr17 23126563 23126851 -62311629 + AluSx SINE Alu 1 292 -20 1940 229 100 49 chr17 23126851 23127270 -62311210 + MER21B LTR ERV1 277 750 -113 183 320 27 0 chr17 23128881 23128956 -62309524 - MIR SINE MIR -107 155 79 22 0 0 0 chr17 23130275 23130297 -62308183 + AT_rich Low_complexity Low_complexity 1 22 0 452 348 61 7 chr17 23130309 23130592 -62307888 + L2 LINE L2 2748 3047 -266 2420 212 40 7 chr17 23130653 23131256 -62307224 - L1MB7 LINE L1 0 6184 5562 3871 268 58 18 chr17 23131272 23132939 -62305541 - L1MB7 LINE L1 -729 5445 3715 1180 69 0 14 chr17 23133054 23133199 -62305281 - AluSq/x SINE Alu -169 143 1 521 224 67 0 chr17 23133287 23133452 -62305028 + L1M4 LINE L1 3927 4102 -2044 246 347 124 44 chr17 23133453 23133727 -62304753 + L2 LINE L2 1214 1509 -1805 217 228 0 53 chr17 23134555 23134612 -62303868 + L2 LINE L2 3217 3270 -2 2294 98 7 0 chr17 23134867 23135163 -62303317 + AluSx SINE Alu 12 309 -3 435 332 53 68 chr17 23135180 23135520 -62302960 - L1M4 LINE L1 -1313 4833 4499 28 29 0 0 chr17 23135620 23135655 -62302825 + AT_rich Low_complexity Low_complexity 1 35 0 26 101 0 0 chr17 23135755 23135844 -62302636 + AT_rich Low_complexity Low_complexity 1 89 0 22 0 0 0 chr17 23135963 23135985 -62302495 + AT_rich Low_complexity Low_complexity 1 22 0 1610 178 3 66 chr17 23136055 23136211 -62302269 + AluJo SINE Alu 1 128 -184 2470 88 0 0 chr17 23136211 23136518 -62301962 + AluY SINE Alu 1 307 -4 1610 178 3 66 chr17 23136518 23136681 -62301799 + AluJo SINE Alu 128 300 -12 1964 115 45 7 chr17 23136700 23136987 -62301493 + AluSg SINE Alu 1 298 -12 29 0 0 0 chr17 23137013 23137042 -62301438 + AT_rich Low_complexity Low_complexity 1 29 0 242 325 84 19 chr17 23137161 23137315 -62301165 - MIR3 SINE MIR -4 204 41 182 120 0 0 chr17 23137380 23137405 -62301075 + MER5B DNA MER1_type 24 48 -130 272 244 39 26 chr17 23137664 23137742 -62300738 - L1MC4a LINE L1 -1873 5935 5857 2201 97 0 20 chr17 23137744 23138042 -62300438 + AluY SINE Alu 1 292 -19 2251 103 3 0 chr17 23138109 23138399 -62300081 + AluSp SINE Alu 1 291 -22 2294 99 3 22 chr17 23139838 23140152 -62298328 + AluSc SINE Alu 1 308 -1 1983 157 3 0 chr17 23140938 23141232 -62297248 + AluSx SINE Alu 1 295 -17 2056 147 0 16 chr17 23141422 23141559 -62296921 + AluSx SINE Alu 1 139 -173 2305 113 3 0 chr17 23141559 23141861 -62296619 + AluSg SINE Alu 1 303 -7 2056 147 0 16 chr17 23141861 23142037 -62296443 + AluSx SINE Alu 139 309 -3 219 312 13 26 chr17 23142180 23142257 -62296223 - MIR SINE MIR -3 259 184 312 70 0 0 chr17 23142661 23142704 -62295776 + (CA)n Simple_repeat Simple_repeat 2 44 0 719 281 123 37 chr17 23142731 23143304 -62295176 + L2 LINE L2 2584 3209 -104 227 233 148 79 chr17 23143372 23143853 -62294627 + L1M4 LINE L1 4419 4932 -1214 * 232 244 8 94 chr17 23143821 23143948 -62294532 + L1P LINE L1 4901 5016 -1130 410 261 108 25 chr17 23144296 23144453 -62294027 - MIR SINE MIR -59 203 34 2372 97 3 0 chr17 23144516 23144824 -62293656 + AluSp SINE Alu 5 313 0 1559 167 11 8 chr17 23144927 23145191 -62293289 + AluSq SINE Alu 1 265 -48 657 209 29 3 chr17 23145994 23146148 -62292332 + MIR SINE MIR 25 181 -63 250 291 63 47 chr17 23146259 23146386 -62292094 - MIR SINE MIR -101 161 33 219 244 41 174 chr17 23146644 23146984 -62291496 - L2 LINE L2 -89 3183 2889 2312 94 0 7 chr17 23147326 23147623 -62290857 - AluSx SINE Alu -17 295 1 2123 89 4 0 chr17 23147668 23147939 -62290541 - AluSg SINE Alu -38 272 1 372 196 147 0 chr17 23148044 23148146 -62290334 - MLT1H LTR MaLR 0 549 433 657 231 97 21 chr17 23148171 23148409 -62290071 - MLT1H LTR MaLR -221 328 73 2244 112 3 0 chr17 23148666 23148961 -62289519 + AluSq SINE Alu 1 296 -17 494 264 118 1 chr17 23149692 23149845 -62288635 - MIR SINE MIR -34 228 60 614 282 57 19 chr17 23149928 23150137 -62288343 - MIR SINE MIR -33 229 13 437 280 217 6 chr17 23150542 23150717 -62287763 - MIR SINE MIR -12 250 39 485 315 21 0 chr17 23150858 23151001 -62287479 + MIR SINE MIR 95 240 -22 183 238 270 0 chr17 23151473 23151536 -62286944 - MIR SINE MIR -118 144 65 452 267 35 41 chr17 23151549 23151721 -62286759 - MIR SINE MIR -78 184 14 446 275 0 0 chr17 23152324 23152491 -62285989 + (TG)n Simple_repeat Simple_repeat 1 167 0 524 256 99 37 chr17 23152732 23152923 -62285557 - MIR SINE MIR -20 242 40 1575 236 83 36 chr17 23153485 23153524 -62284956 - L1MB5 LINE L1 0 6174 6138 2412 89 7 0 chr17 23153524 23153828 -62284652 - AluSx SINE Alu -6 306 1 1575 236 83 36 chr17 23153828 23154317 -62284163 - L1MB5 LINE L1 -36 6138 5621 226 276 89 106 chr17 23154514 23154637 -62283843 - MIR SINE MIR -72 136 16 241 315 36 0 chr17 23155307 23155418 -62283062 - MIR SINE MIR -58 150 36 758 259 232 18 chr17 23155505 23155845 -62282635 - L2 LINE L2 -3 3310 2898 291 238 0 0 chr17 23156388 23156451 -62282029 + MIR SINE MIR 90 152 -110 373 273 118 8 chr17 23156941 23157271 -62281209 + LTR33A LTR ERVL 152 792 -3 268 283 4 8 chr17 23157888 23158148 -62280332 + (CA)n Simple_repeat Simple_repeat 1 259 0 215 264 11 23 chr17 23158149 23158236 -62280244 + (CATA)n Simple_repeat Simple_repeat 4 89 0 1804 145 0 35 chr17 23158921 23159231 -62279249 - AluJo SINE Alu 0 312 14 348 179 36 12 chr17 23162244 23162328 -62276152 - MER65C LTR ERV1 0 461 376 5864 96 26 15 chr17 23162431 23162620 -62275860 + L1PA14 LINE L1 4815 5000 -1161 2192 162 0 23 chr17 23162620 23162965 -62275515 + MER1B DNA MER1_type 1 337 0 5864 96 26 15 chr17 23162965 23164110 -62274370 + L1PA14 LINE L1 5000 6152 -9 886 226 21 8 chr17 23164117 23164352 -62274128 - MER65C LTR ERV1 -124 337 100 3586 235 85 41 chr17 23165510 23165723 -62272757 - L1M4 LINE L1 -5140 1402 1200 1834 156 14 3 chr17 23165723 23166011 -62272469 + AluSx SINE Alu 1 291 -21 3586 235 85 41 chr17 23166011 23166359 -62272121 - L1M4 LINE L1 -5342 1200 869 1733 161 38 0 chr17 23166359 23166626 -62271854 + AluJo SINE Alu 1 277 -35 208 0 62 0 chr17 23166632 23166664 -62271816 + (TAAAA)n Simple_repeat Simple_repeat 2 35 0 3586 235 85 41 chr17 23166664 23167416 -62271064 - L1M4 LINE L1 -5677 865 23 459 281 140 9 chr17 23167426 23167647 -62270833 + Charlie2 DNA MER1_type 69 318 -2544 1435 200 61 47 chr17 23167666 23168160 -62270320 + Charlie2 DNA MER1_type 1866 2366 -496 297 274 112 17 chr17 23169175 23169354 -62269126 + MLT1J2 LTR MaLR 21 216 -234 403 296 47 52 chr17 23169774 23169860 -62268620 - MIR SINE MIR -22 240 155 2149 132 0 13 chr17 23169860 23170171 -62268309 - AluJo SINE Alu -5 307 1 403 296 47 52 chr17 23170171 23170317 -62268163 - MIR SINE MIR -107 155 9 1546 178 0 19 chr17 23170635 23170894 -62267586 - AluJo SINE Alu -54 258 5 914 165 14 104 chr17 23171632 23171844 -62266636 - AluJo SINE Alu -117 195 3 392 291 89 28 chr17 23171862 23172075 -62266405 + MIR SINE MIR 1 226 -36 266 274 12 0 chr17 23172202 23172286 -62266194 + L1ME3A LINE L1 6081 6165 -5 2088 102 0 42 chr17 23173414 23173747 -62264733 + L1PA13 LINE L1 5845 6163 0 603 249 22 11 chr17 23173749 23173934 -62264546 - MER65C LTR ERV1 -133 328 142 14678 115 35 7 chr17 23174613 23176610 -62261870 + Tigger1 DNA MER2_type 42 2114 -304 1936 150 22 29 chr17 23176610 23176924 -62261556 + AluJo SINE Alu 1 312 0 14678 115 35 7 chr17 23176924 23177238 -62261242 + Tigger1 DNA MER2_type 2114 2418 0 2199 163 71 19 chr17 23177787 23178198 -62260282 - MSTB1 LTR MaLR 0 432 1 1301 140 0 5 chr17 23178677 23178870 -62259610 + AluJo SINE Alu 121 312 0 1757 125 84 6 chr17 23178870 23179181 -62259299 + Tigger1 DNA MER2_type 2083 2417 -1 2197 163 71 19 chr17 23179732 23180143 -62258337 - MSTB1 LTR MaLR 0 432 1 447 305 144 11 chr17 23181742 23182096 -62256384 - MLT1H1 LTR MaLR -121 434 34 431 331 43 23 chr17 23182605 23183164 -62255316 - L1M4 LINE L1 -839 5307 4735 219 69 0 0 chr17 23183179 23183208 -62255272 + (TG)n Simple_repeat Simple_repeat 2 30 0 1077 258 103 64 chr17 23184981 23185551 -62252929 - L1M4 LINE L1 -849 5297 4698 1810 165 50 0 chr17 23185551 23185848 -62252632 - AluSx SINE Alu 0 312 1 1077 258 103 64 chr17 23185848 23185906 -62252574 - L1M4 LINE L1 -1448 4698 4644 269 20 80 0 chr17 23186605 23186655 -62251825 + (TTTG)n Simple_repeat Simple_repeat 4 57 0 184 271 0 71 chr17 23186924 23186994 -62251486 - L2 LINE L2 -1916 1398 1334 2841 168 4 15 chr17 23188724 23189266 -62249214 + L1MB4 LINE L1 5389 5924 -256 2693 152 19 2 chr17 23189281 23189703 -62248777 - MSTB1 LTR MaLR -3 429 1 257 146 0 0 chr17 23189705 23189746 -62248734 + L1M4 LINE L1 3534 3574 -2572 258 216 10 72 chr17 23189753 23189850 -62248630 - MLT1E1 LTR MaLR -278 376 286 * 276 244 100 0 chr17 23189829 23189919 -62248561 - MLT1E1 LTR MaLR -487 167 69 1470 214 127 37 chr17 23190459 23190922 -62247558 - MLT1D LTR MaLR 0 505 1 1132 263 30 0 chr17 23191086 23191386 -62247094 - ERVL LTR ERVL -1122 4642 4334 1282 158 54 15 chr17 23191402 23191661 -62246819 - MLT1B LTR MaLR -121 269 1 240 184 0 0 chr17 23192119 23192168 -62246312 + (TCCA)n Simple_repeat Simple_repeat 4 52 0 235 116 23 23 chr17 23192213 23192256 -62246224 - L2 LINE L2 -75 3238 3196 756 199 102 42 chr17 23192256 23192472 -62246008 - MER58B DNA MER1_type 0 341 113 950 112 0 0 chr17 23192737 23192862 -62245618 + FLAM_C SINE Alu 1 125 -8 233 56 0 28 chr17 23194034 23194070 -62244410 + (CA)n Simple_repeat Simple_repeat 2 36 0 282 309 20 26 chr17 23195224 23195376 -62243104 + (TCTG)n Simple_repeat Simple_repeat 2 152 0 887 298 98 24 chr17 23195621 23196194 -62242286 - L1ME1 LINE L1 -9 6157 5543 180 0 0 0 chr17 23196453 23196473 -62242007 + (CCCCAG)n Simple_repeat Simple_repeat 2 21 0 283 154 123 31 chr17 23196671 23196736 -62241744 - MIR SINE MIR -105 157 87 425 221 9 0 chr17 23197379 23197492 -62240988 + Charlie4 DNA MER1_type 1780 1893 -68 330 194 28 65 chr17 23197749 23197857 -62240623 - L2 LINE L2 -19 3294 3191 289 350 50 0 chr17 23197990 23198130 -62240350 + L2 LINE L2 2915 3061 -211 224 237 247 0 chr17 23198659 23198752 -62239728 - MIR SINE MIR -63 145 30 293 292 89 30 chr17 23199227 23199566 -62238914 - L2 LINE L2 -297 3016 2657 355 301 45 23 chr17 23200286 23200419 -62238061 - MIR SINE MIR -80 182 47 3784 125 22 16 chr17 23201735 23202054 -62236426 + L1PA14 LINE L1 4687 5003 -1158 2239 154 0 23 chr17 23202054 23202399 -62236081 + MER1B DNA MER1_type 1 337 0 3784 125 22 16 chr17 23202399 23203271 -62235209 + L1PA14 LINE L1 5003 5882 -279 279 243 14 14 chr17 23203403 23203473 -62235007 + L2 LINE L2 3180 3249 -64 21 0 0 0 chr17 23203507 23203528 -62234952 + AT_rich Low_complexity Low_complexity 1 21 0 2229 117 0 3 chr17 23204038 23204337 -62234143 - AluSg SINE Alu -12 298 1 333 279 143 37 chr17 23206012 23206239 -62232241 - L1ME LINE L1 -481 5681 5426 316 271 47 28 chr17 23206240 23206347 -62232133 - L1ME LINE L1 -2405 5403 5295 953 106 0 0 chr17 23206473 23206596 -62231884 - AluSg/x SINE Alu -36 276 154 3590 189 53 6 chr17 23206603 23207673 -62230807 - L1MB7 LINE L1 -76 6108 4997 445 294 154 48 chr17 23207832 23208230 -62230250 - L1MDa LINE L1 -4440 1689 1254 540 265 118 19 chr17 23208252 23208565 -62229915 - L1MDa LINE L1 -4880 1239 896 263 289 94 62 chr17 23208698 23208826 -62229654 + MIR SINE MIR 112 243 -19 358 330 126 15 chr17 23208828 23209089 -62229391 + L1M4 LINE L1 4376 4665 -1481 2124 108 10 7 chr17 23209092 23209407 -62229073 + AluY SINE Alu 1 311 0 485 241 71 14 chr17 23210026 23210167 -62228313 - MIR SINE MIR -99 163 15 545 241 121 54 chr17 23210186 23210410 -62228070 + MIR SINE MIR 23 261 -1 423 234 0 0 chr17 23211274 23211398 -62227082 + (TCCA)n Simple_repeat Simple_repeat 3 126 0 184 288 225 0 chr17 23211593 23211673 -62226807 - MIR SINE MIR -64 144 47 281 293 0 0 chr17 23211822 23211897 -62226583 + MIR SINE MIR 19 93 -115 330 203 0 0 chr17 23212071 23212130 -62226350 - MIR SINE MIR -89 119 61 360 248 20 94 chr17 23212144 23212293 -62226187 + MIR3 SINE MIR 44 181 -27 227 320 231 15 chr17 23213492 23213886 -62224594 - L2 LINE L2 -214 3058 2579 609 213 0 0 chr17 23214555 23214724 -62223756 + (ATG)n Simple_repeat Simple_repeat 2 170 0 566 220 6 0 chr17 23214770 23214947 -62223533 + (ATG)n Simple_repeat Simple_repeat 3 180 0 219 106 45 45 chr17 23214949 23215015 -62223465 + (ATGGTG)n Simple_repeat Simple_repeat 1 66 0 630 246 0 0 chr17 23215067 23215193 -62223287 - FLAM_A SINE Alu -7 126 1 406 251 38 44 chr17 23215199 23215382 -62223098 + L1ME LINE L1 5638 5819 -302 496 269 35 7 chr17 23215492 23215633 -62222847 + L2 LINE L2 3167 3311 -2 286 263 161 76 chr17 23215785 23216021 -62222459 + MLT1L LTR MaLR 135 390 -225 303 334 38 10 chr17 23217401 23217596 -62220884 - MIR SINE MIR -29 233 33 234 0 0 0 chr17 23220652 23220678 -62217802 + (TA)n Simple_repeat Simple_repeat 1 26 0 495 48 0 0 chr17 23222057 23222119 -62216361 + (GA)n Simple_repeat Simple_repeat 2 63 0 243 0 0 0 chr17 23222129 23222156 -62216324 + (A)n Simple_repeat Simple_repeat 1 27 0 907 287 71 2 chr17 23223470 23223934 -62214546 - L1M4 LINE L1 -3404 2742 2247 38 61 0 0 chr17 23223935 23224001 -62214479 + AT_rich Low_complexity Low_complexity 1 66 0 832 160 183 6 chr17 23224143 23224312 -62214168 - AluSg/x SINE Alu -27 282 84 1007 194 94 43 chr17 23224312 23224641 -62213839 + MER119 DNA MER1_type 75 420 -163 1997 244 66 47 chr17 23224642 23225699 -62212781 - L1ME1 LINE L1 -79 6087 4997 257 314 39 0 chr17 23225724 23225826 -62212654 - MLT1K LTR MaLR -104 484 379 959 152 52 9 chr17 23226942 23227152 -62211328 + MER33 DNA MER1_type 1 219 -105 1099 244 155 40 chr17 23227169 23227640 -62210840 + L1MC4 LINE L1 7278 7802 -240 593 294 58 17 chr17 23227644 23227937 -62210543 + HERVL LTR ERVL 4077 4381 -1273 362 178 0 74 chr17 23228423 23228586 -62209894 + (ATGGTG)n Simple_repeat Simple_repeat 1 151 0 374 227 64 27 chr17 23228977 23229087 -62209393 - MIR SINE MIR -13 249 136 2527 174 16 4 chr17 23229089 23229578 -62208902 - L1MB2 LINE L1 -7 6164 5670 204 290 32 0 chr17 23229888 23229950 -62208530 - L2 LINE L2 -1 3312 3249 613 294 64 5 chr17 23230093 23230311 -62208169 - MIR SINE MIR -1 261 31 357 290 19 0 chr17 23231868 23231975 -62206505 - L2 LINE L2 -18 3254 3146 2351 119 0 0 chr17 23232674 23232984 -62205496 - AluSg SINE Alu 0 310 1 282 288 42 8 chr17 23233278 23233396 -62205084 - MER94 DNA DNA -2 132 11 1774 217 82 16 chr17 23233494 23233983 -62204497 - MER90 LTR ERV1 0 614 94 507 261 128 15 chr17 23234753 23234956 -62203524 + MIR SINE MIR 30 255 -7 344 221 48 77 chr17 23235486 23235590 -62202890 - MIR SINE MIR -70 192 92 190 405 9 0 chr17 23235804 23235915 -62202565 + L2 LINE L2 2748 2859 -455 207 0 0 0 chr17 23236111 23236134 -62202346 + (CATA)n Simple_repeat Simple_repeat 2 24 0 1983 120 0 27 chr17 23236156 23236448 -62202032 - AluSq SINE Alu -19 294 11 2039 121 17 10 chr17 23236563 23236860 -62201620 - AluSq SINE Alu -14 299 1 957 148 7 0 chr17 23236861 23237003 -62201477 - AluY SINE Alu -168 143 1 1288 159 120 33 chr17 23238023 23238324 -62200156 - SST1 Satellite centromeric 0 1563 1237 887 163 13 0 chr17 23238329 23238482 -62199998 + AluSg/x SINE Alu 157 311 -1 7334 162 16 17 chr17 23238548 23239963 -62198517 - SST1 Satellite centromeric -150 1413 1 1951 298 61 40 chr17 23240512 23241473 -62197007 - SST1 Satellite centromeric -324 1239 245 345 75 0 0 chr17 23241473 23241526 -62196954 + (CCCCAG)n Simple_repeat Simple_repeat 5 57 0 1951 298 61 40 chr17 23241526 23241777 -62196703 - SST1 Satellite centromeric -1318 245 1 217 259 25 0 chr17 23242520 23242601 -62195879 + (CAGA)n Simple_repeat Simple_repeat 2 84 0 * 239 173 19 0 chr17 23242558 23242610 -62195870 + GA-rich Low_complexity Low_complexity 2 54 0 219 103 0 0 chr17 23242617 23242656 -62195824 + (CA)n Simple_repeat Simple_repeat 2 40 0 2618 280 57 51 chr17 23242658 23251213 -62187267 - SST1 Satellite centromeric -45 8605 1 252 293 10 11 chr17 23251459 23251562 -62186918 + MIR SINE MIR 49 144 -64 362 286 81 37 chr17 23252412 23252573 -62185907 - Charlie4a DNA MER1_type -61 447 280 253 150 0 0 chr17 23253205 23253245 -62185235 - MIR SINE MIR -60 148 109 414 205 79 55 chr17 23254355 23254482 -62183998 - L1M4 LINE L1 -2991 3155 3026 576 266 118 63 chr17 23254499 23254778 -62183702 + MER77 LTR ERV1 323 599 -6 1599 208 18 0 chr17 23255405 23255746 -62182734 - MER7A DNA MER2_type 0 346 2 26 0 0 0 chr17 23255804 23255830 -62182650 + AT_rich Low_complexity Low_complexity 1 26 0 206 282 24 24 chr17 23256023 23256108 -62182372 + (TATG)n Simple_repeat Simple_repeat 3 87 0 24 0 0 0 chr17 23257019 23257043 -62181437 + AT_rich Low_complexity Low_complexity 1 24 0 21 36 0 0 chr17 23259015 23259043 -62179437 + AT_rich Low_complexity Low_complexity 1 28 0 239 343 89 20 chr17 23260937 23261733 -62176747 + L1MEd LINE L1 506 1398 -4867 237 234 43 21 chr17 23262126 23262220 -62176260 + MIR SINE MIR 48 143 -119 504 310 107 9 chr17 23263038 23263254 -62175226 + MIR SINE MIR 20 256 -6 413 324 29 29 chr17 23263427 23263631 -62174849 + L2 LINE L2 2848 3051 -262 376 256 0 0 chr17 23263728 23263810 -62174670 + L2 LINE L2 3231 3312 -1 344 330 48 24 chr17 23263998 23264207 -62174273 - L2 LINE L2 -177 3095 2882 228 253 253 0 chr17 23265067 23265166 -62173314 + L2 LINE L2 3174 3297 -16 199 250 0 0 chr17 23265132 23265172 -62173308 + MIR SINE MIR 219 258 -4 * 1019 269 106 10 chr17 23265223 23265370 -62173110 - L2 LINE L2 -1 3312 3181 1601 148 74 35 chr17 23265370 23265654 -62172826 + AluJb SINE Alu 1 295 -17 1019 269 106 10 chr17 23265654 23265923 -62172557 - L2 LINE L2 -132 3181 2856 231 325 98 35 chr17 23266436 23266691 -62171789 + L2 LINE L2 2917 3187 -85 300 248 228 0 chr17 23266989 23267090 -62171390 + L2 LINE L2 3189 3312 -1 301 238 90 66 chr17 23267096 23267218 -62171262 - MIR SINE MIR -85 177 53 274 314 51 22 chr17 23267576 23267713 -62170767 - MIR SINE MIR -80 182 42 238 185 49 74 chr17 23267789 23267870 -62170610 - MIR SINE MIR -107 155 77 2579 71 0 3 chr17 23268157 23268465 -62170015 - AluSg SINE Alu -3 307 1 402 269 37 0 chr17 23268518 23268626 -62169854 - L2 LINE L2 0 3272 3161 410 297 79 60 chr17 23268920 23269078 -62169402 + HAL1 LINE L1 1 155 -2352 1856 171 0 0 chr17 23269078 23269370 -62169110 - AluJo SINE Alu -20 292 1 410 297 79 60 chr17 23269370 23269592 -62168888 + HAL1 LINE L1 155 388 -2119 368 192 26 13 chr17 23269587 23269665 -62168815 + HAL1 LINE L1 1304 1382 -1125 * 626 272 70 32 chr17 23269648 23269964 -62168516 + HAL1 LINE L1 2022 2349 -158 1592 80 0 55 chr17 23271366 23271604 -62166876 + AluSx SINE Alu 1 225 -87 321 276 47 39 chr17 23271900 23272027 -62166453 + L1ME4a LINE L1 5979 6106 -15 30 27 0 0 chr17 23272067 23272104 -62166376 + AT_rich Low_complexity Low_complexity 1 37 0 191 310 84 0 chr17 23272123 23272194 -62166286 + L2 LINE L2 2991 3067 -205 1178 139 11 5 chr17 23272587 23272774 -62165706 - AluSx SINE Alu -124 188 1 376 89 56 22 chr17 23272774 23272864 -62165616 - Charlie5 DNA MER1_type -77 2535 2443 1634 78 13 13 chr17 23272864 23273094 -62165386 + L1PA6 LINE L1 5922 6151 -3 2209 125 0 0 chr17 23273119 23273431 -62165049 - AluSx SINE Alu 0 312 1 256 45 0 45 chr17 23273443 23273487 -62164993 + (TCCCC)n Simple_repeat Simple_repeat 5 46 0 1216 104 16 6 chr17 23273499 23273682 -62164798 - AluSg/x SINE Alu -25 285 101 2308 102 0 3 chr17 23274061 23274374 -62164106 - AluSx SINE Alu 0 312 1 240 213 0 0 chr17 23274528 23274575 -62163905 + (TTCA)n Simple_repeat Simple_repeat 4 50 0 289 240 130 0 chr17 23274577 23274677 -62163803 - L2 LINE L2 0 3313 3201 1774 145 31 3 chr17 23274708 23274997 -62163483 + AluJb SINE Alu 1 297 -15 658 111 154 17 chr17 23275136 23275253 -62163227 + FLAM_C SINE Alu 1 133 0 2022 90 25 0 chr17 23275274 23275597 -62162883 - AluSp SINE Alu 0 330 1 241 303 0 0 chr17 23275828 23275904 -62162576 + C-rich Low_complexity Low_complexity 1 76 0 423 196 0 0 chr17 23275917 23276050 -62162430 + C-rich Low_complexity Low_complexity 1 133 0 225 139 0 0 chr17 23276189 23276232 -62162248 + (TC)n Simple_repeat Simple_repeat 1 43 0 1796 146 0 10 chr17 23276287 23276618 -62161862 - AluSx SINE Alu 0 328 1 1414 182 128 0 chr17 23276620 23276878 -62161602 - AluJb SINE Alu -11 291 1 455 235 83 78 chr17 23276880 23277110 -62161370 + MER102b DNA MER1_type 88 318 -23 2232 73 10 3 chr17 23277146 23277447 -62161033 - AluSq SINE Alu -10 303 1 276 354 101 25 chr17 23277573 23277771 -62160709 + MIR SINE MIR 15 227 -35 347 109 36 0 chr17 23278113 23278168 -62160312 - Alu SINE Alu -246 57 1 1612 251 37 9 chr17 23278451 23278906 -62159574 - L1MB5 LINE L1 0 6174 5707 1097 251 117 3 chr17 23279391 23279725 -62158755 + MLT1B LTR MaLR 1 372 -18 315 131 10 172 chr17 23280049 23280148 -62158332 - MLT1B LTR MaLR -307 83 1 919 162 7 0 chr17 23280174 23280328 -62158152 + FRAM SINE Alu 2 156 -20 924 248 133 0 chr17 23280772 23281058 -62157422 + MLT1G LTR MaLR 1 324 -266 447 233 60 45 chr17 23281054 23281187 -62157293 + MLT1G LTR MaLR 454 588 -2 * 554 239 0 0 chr17 23281722 23281831 -62156649 + MER81 DNA DNA 2 110 -4 676 241 100 26 chr17 23282487 23282738 -62155742 - MLT1G LTR MaLR -288 242 1 442 298 85 0 chr17 23283605 23283746 -62154734 + MIR SINE MIR 2 154 -108 250 317 69 57 chr17 23283890 23284072 -62154408 + MIR SINE MIR 6 193 -49 482 214 22 116 chr17 23284522 23284629 -62153851 + L1ME2 LINE L1 5214 5289 -877 2307 83 26 0 chr17 23284629 23284931 -62153549 + AluSg SINE Alu 1 310 0 482 214 22 116 chr17 23284931 23285062 -62153418 + L1ME2 LINE L1 5289 5431 -735 768 65 19 9 chr17 23285170 23285278 -62153202 + AluSp/q SINE Alu 188 296 -17 192 77 0 0 chr17 23285317 23285343 -62153137 + (T)n Simple_repeat Simple_repeat 1 26 0 1779 52 4 21 chr17 23285343 23285576 -62152904 - AluY SINE Alu -82 229 1 2852 102 11 9 chr17 23285576 23286015 -62152465 + MER4D LTR ERV1 204 643 -260 1272 136 15 157 chr17 23286045 23286383 -62152097 + AluJo SINE Alu 11 300 -12 1569 76 84 12 chr17 23286385 23286634 -62151846 + MER4D LTR ERV1 637 903 0 688 252 106 57 chr17 23286634 23286736 -62151744 + L1ME2 LINE L1 5792 5887 -277 1960 138 0 0 chr17 23286736 23287032 -62151448 + AluSx SINE Alu 1 296 -16 688 252 106 57 chr17 23287032 23287211 -62151269 + L1ME2 LINE L1 5887 6087 -77 281 283 98 0 chr17 23287385 23287477 -62151003 + MIR3 SINE MIR 82 182 -26 306 242 26 108 chr17 23287623 23287817 -62150663 + MIR SINE MIR 79 256 -6 25 0 0 0 chr17 23287927 23287952 -62150528 + GC_rich Low_complexity Low_complexity 1 25 0 340 299 62 67 chr17 23288246 23288440 -62150040 - L1MDa LINE L1 -3965 2575 2383 514 266 34 17 chr17 23288852 23289029 -62149451 + MIR SINE MIR 72 251 -11 1928 110 20 14 chr17 23289090 23289382 -62149098 - AluSx SINE Alu -18 294 1 257 308 89 7 chr17 23289494 23289640 -62148840 - MIR3 SINE MIR -16 192 35 270 189 38 42 chr17 23289767 23289865 -62148615 - MIR SINE MIR -58 150 81 216 135 0 0 chr17 23290095 23290132 -62148348 + (T)n Simple_repeat Simple_repeat 1 37 0 405 321 70 5 chr17 23290657 23290844 -62147636 - MIR SINE MIR -14 248 50 * 717 266 258 16 chr17 23290836 23291396 -62147084 - L2 LINE L2 -4 3309 2605 190 349 16 0 chr17 23291535 23291598 -62146882 - MIR SINE MIR -113 149 86 190 104 21 21 chr17 23291698 23291746 -62146734 + (TGGGGG)n Simple_repeat Simple_repeat 1 48 0 544 163 0 22 chr17 23291761 23291945 -62146535 + G-rich Low_complexity Low_complexity 1 180 0 186 222 0 0 chr17 23291969 23292023 -62146457 + G-rich Low_complexity Low_complexity 1 54 0 2010 130 7 3 chr17 23292140 23292447 -62146033 + AluSg SINE Alu 1 308 -2 353 327 60 24 chr17 23292459 23292710 -62145770 + L1MC4 LINE L1 7623 7882 -160 736 183 0 0 chr17 23292752 23292867 -62145613 - FLAM_C SINE Alu -18 115 1 2361 86 0 0 chr17 23292892 23293196 -62145284 + AluY SINE Alu 1 304 -7 237 180 49 33 chr17 23293420 23293481 -62144999 - MIR3 SINE MIR -46 162 101 317 269 55 0 chr17 23293607 23293731 -62144749 - MIR SINE MIR -63 145 43 237 256 144 0 chr17 23293749 23293839 -62144641 + MIR SINE MIR 16 118 -144 307 369 65 28 chr17 23294139 23294353 -62144127 + L2 LINE L2 2940 3161 -111 269 326 39 31 chr17 23294431 23294560 -62143920 + MIR SINE MIR 21 150 -112 2700 209 46 24 chr17 23294621 23295277 -62143203 - L1ME1 LINE L1 -5 6161 5488 2199 67 46 0 chr17 23295277 23295560 -62142920 - AluSg SINE Alu -14 296 1 2700 209 46 24 chr17 23295560 23295579 -62142901 - L1ME1 LINE L1 -678 5488 5471 1218 136 4 78 chr17 23295580 23295759 -62142721 - AluJo SINE Alu -3 309 151 2349 68 3 0 chr17 23295759 23296053 -62142427 - AluSx SINE Alu -17 295 1 1218 136 4 78 chr17 23296053 23296115 -62142365 - AluJo SINE Alu -161 151 86 608 227 31 43 chr17 23296115 23296372 -62142108 - L1ME1 LINE L1 -670 5492 5254 523 188 0 0 chr17 23296536 23296616 -62141864 + AluS SINE Alu 13 92 -220 2340 64 0 0 chr17 23296867 23297162 -62141318 - AluY SINE Alu -16 295 1 869 173 53 62 chr17 23297306 23297498 -62140982 - L1MD3 LINE L1 0 7995 7804 2262 100 0 13 chr17 23297498 23297807 -62140673 - AluSg SINE Alu -5 305 1 869 173 53 62 chr17 23297807 23297840 -62140640 - L1MD3 LINE L1 -191 7804 7772 1005 259 174 32 chr17 23297860 23298296 -62140184 + L1MC4a LINE L1 5436 5933 -1875 317 262 179 0 chr17 23298752 23298836 -62139644 + LTR33A LTR ERVL 59 157 -366 198 266 62 0 chr17 23299127 23299191 -62139289 - MIR SINE MIR -66 142 75 436 328 129 34 chr17 23299201 23299370 -62139110 + L2 LINE L2 2863 3015 -298 1765 183 0 0 chr17 23299370 23299665 -62138815 - AluJo SINE Alu -17 295 1 436 328 129 34 chr17 23299665 23299907 -62138573 + L2 LINE L2 3015 3313 0 376 296 61 109 chr17 23300321 23300477 -62138003 + MIR SINE MIR 9 152 -110 2013 112 7 0 chr17 23300477 23300762 -62137718 - AluSx SINE Alu -25 287 1 376 296 61 109 chr17 23300762 23300835 -62137645 + MIR SINE MIR 152 227 -35 241 272 97 10 chr17 23300840 23300943 -62137537 - MIR SINE MIR -58 204 93 523 92 0 13 chr17 23301172 23301248 -62137232 + Alu SINE Alu 1 75 -243 297 189 32 84 chr17 23301791 23301886 -62136594 + MIR SINE MIR 27 116 -146 184 284 91 11 chr17 23302000 23302088 -62136392 + L2 LINE L2 2634 2728 -586 882 44 0 26 chr17 23302158 23302272 -62136208 - L1PA6 LINE L1 0 6154 6044 1607 171 4 0 chr17 23302272 23302536 -62135944 - AluJo SINE Alu -20 292 28 277 306 45 9 chr17 23302540 23302651 -62135829 + L1ME1 LINE L1 6043 6157 -9 2063 145 0 0 chr17 23302652 23302955 -62135525 - AluSx SINE Alu -9 303 1 706 80 97 0 chr17 23303111 23303224 -62135256 - MER41B LTR ERV1 0 635 512 2175 102 0 7 chr17 23303224 23303528 -62134952 + AluSg SINE Alu 1 302 -8 1309 113 0 10 chr17 23303850 23304044 -62134436 + AluSg/x SINE Alu 121 312 0 2903 126 38 34 chr17 23304044 23304374 -62134106 - MER41B LTR ERV1 -126 509 175 2205 66 3 20 chr17 23304374 23304675 -62133805 - AluY SINE Alu -15 296 1 2903 126 38 34 chr17 23304675 23304851 -62133629 - MER41B LTR ERV1 -460 175 1 781 247 207 31 chr17 23304876 23305067 -62133413 + L2 LINE L2 2764 2920 -393 2221 98 3 0 chr17 23305067 23305364 -62133116 - AluSx SINE Alu -14 298 1 781 247 207 31 chr17 23305364 23305646 -62132834 + L2 LINE L2 2920 3308 -5 224 226 0 0 chr17 23306046 23306099 -62132381 - L2 LINE L2 -323 2949 2897 2227 55 21 7 chr17 23306107 23306397 -62132083 + AluY SINE Alu 6 299 -12 919 254 101 10 chr17 23306672 23307038 -62131442 + L1ME LINE L1 5237 5629 -535 793 239 17 11 chr17 23307040 23307216 -62131264 + AluJo SINE Alu 2 178 -134 544 172 11 0 chr17 23307210 23307303 -62131177 + AluJo/FRAM SINE Alu 137 230 -82 * 180 186 47 23 chr17 23307414 23307457 -62131023 - MIR SINE MIR -55 153 110 192 253 169 0 chr17 23308151 23308234 -62130246 - MIR SINE MIR -71 137 41 185 285 63 32 chr17 23308465 23308623 -62129857 - L2 LINE L2 -253 3060 2898 220 206 82 27 chr17 23309486 23309559 -62128921 + MIR SINE MIR 108 184 -78 547 258 101 0 chr17 23310009 23310210 -62128270 + L2 LINE L2 2767 2984 -329 918 181 0 7 chr17 23310332 23310487 -62127993 - AluJo/FRAM SINE Alu -22 290 137 2321 100 0 0 chr17 23310487 23310796 -62127684 - AluSq SINE Alu -4 309 1 398 308 31 25 chr17 23310797 23310956 -62127524 + L2 LINE L2 3151 3310 -3 281 223 157 57 chr17 23311327 23311496 -62126984 + MIR SINE MIR 11 195 -58 567 203 250 0 chr17 23311650 23311912 -62126568 + L2 LINE L2 2676 3016 -297 372 291 111 41 chr17 23311913 23312085 -62126395 + L2 LINE L2 3130 3313 0 205 267 0 0 chr17 23312085 23312130 -62126350 + (TGGA)n Simple_repeat Simple_repeat 2 46 0 520 250 16 0 chr17 23312559 23312683 -62125797 - MIR SINE MIR -32 230 105 235 296 0 0 chr17 23315543 23315614 -62122866 + C-rich Low_complexity Low_complexity 1 71 0 259 229 288 0 chr17 23316209 23316327 -62122153 + MIR3 SINE MIR 32 183 -25 1972 114 35 0 chr17 23316400 23316689 -62121791 + AluSx SINE Alu 12 310 -2 2021 137 12 19 chr17 23317059 23317381 -62121099 - 7SLRNA srpRNA srpRNA 0 320 1 182 222 22 0 chr17 23317437 23317482 -62120998 - L2 LINE L2 -2 3270 3225 422 54 0 0 chr17 23317498 23317554 -62120926 - Alu SINE Alu -10 302 247 2449 64 0 3 chr17 23317841 23318152 -62120328 - AluY SINE Alu -1 310 1 483 216 48 128 chr17 23318686 23318773 -62119707 + MER113 DNA MER1_type? 62 154 -367 1857 158 0 0 chr17 23318773 23319065 -62119415 + AluJo SINE Alu 1 292 -20 483 216 48 128 chr17 23319065 23319227 -62119253 + MER113 DNA MER1_type? 154 291 -230 185 354 0 15 chr17 23319590 23319655 -62118825 + MIR SINE MIR 30 93 -115 377 241 23 0 chr17 23319658 23319745 -62118735 - L2 LINE L2 0 3313 3225 365 316 87 20 chr17 23319773 23319969 -62118511 - L2 LINE L2 -61 3252 3044 630 274 43 11 chr17 23319983 23320169 -62118311 + MLT1L LTR MaLR 347 538 -77 601 281 177 3 chr17 23320226 23320555 -62117925 - L2 LINE L2 -297 3016 2633 337 285 43 126 chr17 23320714 23320882 -62117598 + L2 LINE L2 2543 2681 -633 767 177 0 0 chr17 23320882 23321012 -62117468 - FLAM_C SINE Alu 0 133 4 337 285 43 126 chr17 23321012 23321120 -62117360 + L2 LINE L2 2681 2796 -518 308 310 29 29 chr17 23321121 23321292 -62117188 - MLT1J2 LTR MaLR 0 450 280 2344 99 0 0 chr17 23322396 23322689 -62115791 - AluSc SINE Alu -16 293 1 318 327 88 56 chr17 23322928 23323179 -62115301 - MLT1J2 LTR MaLR -1 449 191 248 329 120 6 chr17 23323317 23323484 -62114996 + L2 LINE L2 2807 2992 -280 299 207 0 0 chr17 23323486 23323544 -62114936 + (CCCA)n Simple_repeat Simple_repeat 3 60 0 839 204 8 4 chr17 23323545 23324082 -62114398 + (TCCA)n Simple_repeat Simple_repeat 1 539 0 236 286 0 0 chr17 23324083 23324139 -62114341 + (CCCA)n Simple_repeat Simple_repeat 2 57 0 803 192 6 0 chr17 23324140 23324317 -62114163 + (TCCA)n Simple_repeat Simple_repeat 1 178 0 1480 241 48 38 chr17 23324331 23324808 -62113672 - L2 LINE L2 -3 3310 2829 259 237 21 0 chr17 23325601 23325694 -62112786 + (TCCA)n Simple_repeat Simple_repeat 4 98 0 247 294 72 33 chr17 23326094 23326274 -62112206 + LTR33A LTR ERVL 335 521 -2 381 348 24 20 chr17 23326582 23326847 -62111633 + ERVL LTR ERVL 384 628 -5026 209 289 99 28 chr17 23327136 23327258 -62111222 + MIR SINE MIR 77 212 -50 2357 79 3 3 chr17 23327258 23327548 -62110932 + AluSx SINE Alu 1 290 -22 209 289 99 28 chr17 23327548 23327567 -62110913 + MIR SINE MIR 212 228 -34 1342 83 22 0 chr17 23329169 23329349 -62109131 + AluSg/x SINE Alu 115 298 -14 21 36 0 0 chr17 23330676 23330704 -62107776 + GC_rich Low_complexity Low_complexity 1 28 0 1133 155 5 10 chr17 23333491 23333691 -62104789 - MER3 DNA MER1_type -10 199 1 473 223 121 18 chr17 23335110 23335211 -62103269 + MER3 DNA MER1_type 1 90 -119 1892 160 3 7 chr17 23335211 23335517 -62102963 - AluJb SINE Alu -7 305 1 473 223 121 18 chr17 23335517 23335581 -62102899 + MER3 DNA MER1_type 90 183 -26 309 283 38 9 chr17 23335614 23335761 -62102719 - MIR SINE MIR -66 142 34 201 322 167 0 chr17 23336190 23336280 -62102200 - L2 LINE L2 -9 3304 3200 360 256 93 8 chr17 23336681 23336708 -62101772 - L1ME4a LINE L1 -2 6119 6096 2602 57 0 0 chr17 23336708 23337007 -62101473 + AluY SINE Alu 1 299 -12 360 256 93 8 chr17 23337007 23337095 -62101385 - L1ME4a LINE L1 -25 6096 5990 2327 101 3 0 chr17 23337095 23337393 -62101087 - AluSq SINE Alu -14 299 1 360 256 93 8 chr17 23337393 23337405 -62101075 - L1ME4a LINE L1 -131 5990 5980 2074 133 7 0 chr17 23337466 23337751 -62100729 - AluSx SINE Alu -25 287 1 1177 242 77 3 chr17 23337814 23338140 -62100340 + L1MB8 LINE L1 5825 6174 -4 1983 136 58 0 chr17 23338179 23338474 -62100006 + AluSq SINE Alu 1 312 -1 1951 159 20 3 chr17 23338482 23338784 -62099696 + AluSg SINE Alu 1 307 -3 3540 140 31 25 chr17 23338784 23339468 -62099012 + L1MB3 LINE L1 5496 6183 0 2394 107 3 0 chr17 23340541 23340849 -62097631 - AluSx SINE Alu -3 309 1 201 74 0 0 chr17 23340851 23340878 -62097602 + (T)n Simple_repeat Simple_repeat 1 27 0 210 71 0 0 chr17 23341022 23341050 -62097430 + (A)n Simple_repeat Simple_repeat 1 28 0 1893 132 73 0 chr17 23341277 23341566 -62096914 - AluSx SINE Alu -2 310 1 1795 122 20 56 chr17 23343068 23343372 -62095108 + AluJb SINE Alu 1 293 -19 2349 88 3 25 chr17 23345643 23345960 -62092520 - AluSg SINE Alu 0 310 1 1289 86 77 32 chr17 23347613 23347833 -62090647 + MER30 DNA MER1_type 1 230 0 1872 151 14 0 chr17 23347964 23348267 -62090213 - AluSx SINE Alu 0 307 1 1696 184 3 27 chr17 23349240 23349539 -62088941 + AluJb SINE Alu 1 292 -20 1704 122 118 0 chr17 23349539 23349801 -62088679 - AluSx SINE Alu -19 293 1 473 241 72 24 chr17 23350758 23350924 -62087556 - MER113 DNA MER1_type? -147 374 201 1025 113 19 50 chr17 23351140 23351300 -62087180 + AluSp SINE Alu 135 289 -24 2154 91 53 0 chr17 23351302 23351587 -62086893 + AluY SINE Alu 1 300 -11 392 113 0 0 chr17 23351591 23351644 -62086836 + Alu SINE Alu 1 53 -250 207 69 0 0 chr17 23351650 23351679 -62086801 + (A)n Simple_repeat Simple_repeat 1 29 0 2378 90 0 13 chr17 23352452 23352764 -62085716 + AluSg SINE Alu 1 308 -2 1936 162 7 0 chr17 23354818 23355114 -62083366 - AluJo SINE Alu -14 298 1 490 168 126 0 chr17 23356407 23356502 -62081978 - FLAM_A SINE Alu -35 107 1 797 144 97 166 chr17 23356526 23356846 -62081634 + L1MC4 LINE L1 7744 8041 -1 2352 60 3 26 chr17 23356850 23357186 -62081294 + AluY SINE Alu 1 311 0 441 226 0 0 chr17 23357292 23357438 -62081042 + G-rich Low_complexity Low_complexity 1 146 0 316 264 62 98 chr17 23357651 23357761 -62080719 - L1ME4a LINE L1 -49 6072 5960 2413 81 0 28 chr17 23357761 23358081 -62080399 - AluY SINE Alu 0 311 1 594 222 6 53 chr17 23358081 23358252 -62080228 - FRAM SINE Alu -2 164 2 316 264 62 98 chr17 23358252 23358333 -62080147 - L1ME4a LINE L1 -159 5962 5887 198 428 14 0 chr17 23359147 23359285 -62079195 - MIR SINE MIR -33 229 90 326 191 53 38 chr17 23359404 23359437 -62079043 - L1MC4 LINE L1 -31 8011 7980 2324 112 0 0 chr17 23359437 23359733 -62078747 + AluSq SINE Alu 1 296 -17 326 191 53 38 chr17 23359733 23359830 -62078650 - L1MC4 LINE L1 -62 7980 7879 215 331 24 48 chr17 23359898 23360022 -62078458 - MIR SINE MIR -98 164 44 296 283 140 49 chr17 23360286 23360598 -62077882 + L1MC4a LINE L1 5671 6015 -106 456 310 38 0 chr17 23360680 23360838 -62077642 - MIR SINE MIR -81 181 18 6325 196 108 68 chr17 23361909 23362736 -62075744 + L1M3 LINE L1 3044 3837 -2343 840 101 0 36 chr17 23362736 23362874 -62075606 + AluJo/FLAM SINE Alu 1 133 -169 2402 87 3 7 chr17 23362876 23363185 -62075295 + AluSp SINE Alu 1 308 -5 6325 196 108 68 chr17 23363185 23363737 -62074743 + L1M3 LINE L1 3837 4366 -1814 928 174 214 86 chr17 23363737 23364039 -62074441 + MSTD LTR MaLR 1 356 -40 1700 213 3 0 chr17 23364039 23364349 -62074131 + AluJo SINE Alu 1 311 -1 928 174 214 86 chr17 23364349 23364397 -62074083 + MSTD LTR MaLR 356 396 0 6325 196 108 68 chr17 23364397 23365052 -62073428 + L1M3 LINE L1 4366 4994 -1186 2265 119 0 3 chr17 23365052 23365355 -62073125 + AluSc SINE Alu 1 302 -7 2424 88 3 3 chr17 23365358 23365666 -62072814 + AluSp SINE Alu 1 308 -5 6325 196 108 68 chr17 23365666 23365811 -62072669 + L1M3 LINE L1 4995 5133 -1047 2099 130 3 13 chr17 23365811 23366110 -62072370 - AluSx SINE Alu -16 296 1 6325 196 108 68 chr17 23366110 23366213 -62072267 + L1M3 LINE L1 5133 5440 -740 1527 158 19 31 chr17 23366213 23366472 -62072008 + AluJo SINE Alu 42 297 -15 2185 105 21 0 chr17 23366482 23366767 -62071713 + AluSx SINE Alu 11 301 -11 266 226 0 0 chr17 23368016 23368078 -62070402 - MLT1K LTR MaLR -13 575 514 190 196 29 214 chr17 23368593 23368766 -62069714 + MIR SINE MIR 95 235 -27 1897 179 3 3 chr17 23368814 23369105 -62069375 - AluJo SINE Alu -21 291 1 1891 163 3 3 chr17 23369136 23369419 -62069061 + AluJo SINE Alu 1 283 -29 1722 139 53 7 chr17 23369586 23369867 -62068613 + AluJb SINE Alu 1 294 -18 1886 154 37 0 chr17 23369918 23370216 -62068264 - AluJb SINE Alu -3 309 1 186 224 35 17 chr17 23372550 23372608 -62065872 + MIR SINE MIR 174 232 -30 196 250 91 23 chr17 23372705 23372793 -62065687 + L2 LINE L2 3153 3246 -26 313 270 11 11 chr17 23373264 23373353 -62065127 + Charlie8 DNA MER1_type 34 122 -2295 231 36 0 0 chr17 23373407 23373435 -62065045 + (CACCC)n Simple_repeat Simple_repeat 4 31 0 279 318 73 11 chr17 23376275 23376454 -62062026 + MIR SINE MIR 8 197 -65 1981 172 0 0 chr17 23377202 23377505 -62060975 + AluJb SINE Alu 1 303 -9 2147 95 49 0 chr17 23379936 23380221 -62058259 - AluSg SINE Alu -11 299 1 1644 158 68 4 chr17 23380250 23380529 -62057951 + AluJo SINE Alu 4 300 -12 284 212 15 30 chr17 23380854 23380920 -62057560 - MARNA DNA Mariner -387 199 135 384 266 46 17 chr17 23381029 23381202 -62057278 - L2 LINE L2 0 3313 3136 1955 142 0 10 chr17 23381544 23381840 -62056640 + AluJo SINE Alu 6 298 -14 1605 169 0 0 chr17 23381882 23382124 -62056356 + AluJb SINE Alu 1 242 -70 2371 83 6 13 chr17 23382643 23382957 -62055523 - AluSx SINE Alu 0 312 1 22 0 0 0 chr17 23382994 23383016 -62055464 + AT_rich Low_complexity Low_complexity 1 22 0 645 253 93 27 chr17 23384264 23384489 -62053991 - L1M4c LINE L1 -4594 1790 1551 5729 151 44 2 chr17 23384491 23385483 -62052997 - L1MC1 LINE L1 0 6613 5573 2247 96 0 26 chr17 23385485 23385797 -62052683 - AluSg SINE Alu -6 304 1 1048 111 7 0 chr17 23385797 23385932 -62052548 - AluSq/x SINE Alu -176 136 1 6233 223 73 63 chr17 23385936 23385986 -62052494 - L1MC1 LINE L1 -846 5580 5532 1693 166 42 7 chr17 23385986 23386270 -62052210 - AluJb SINE Alu -8 304 11 6233 223 73 63 chr17 23386270 23386316 -62052164 - L1MC1 LINE L1 -894 5532 5488 2338 94 0 28 chr17 23386316 23386634 -62051846 + AluSg SINE Alu 1 309 -1 6233 223 73 63 chr17 23386634 23387915 -62050565 - L1MC1 LINE L1 -938 5488 4220 1140 174 38 2 chr17 23387915 23388151 -62050329 - AluJb SINE Alu -19 293 1 6233 223 73 63 chr17 23388151 23388163 -62050317 - L1MC1 LINE L1 -2206 4220 4210 1608 191 17 7 chr17 23388163 23388456 -62050024 - AluJo SINE Alu -16 296 1 6233 223 73 63 chr17 23388456 23388941 -62049539 - L1MC1 LINE L1 -2216 4210 3731 2236 120 7 0 chr17 23388941 23389240 -62049240 - AluSq SINE Alu -12 301 1 2126 125 3 13 chr17 23389242 23389547 -62048933 - AluSx SINE Alu -10 302 1 6233 223 73 63 chr17 23389547 23391546 -62046934 - L1MC1 LINE L1 -2695 3731 1534 2120 127 0 7 chr17 23391546 23391845 -62046635 - AluSq SINE Alu -16 297 1 6233 223 73 63 chr17 23391845 23391970 -62046510 - L1MC1 LINE L1 -4892 1534 1412 1272 179 93 45 chr17 23391982 23392295 -62046185 + MLT1A1 LTR MaLR 1 328 -37 7228 149 42 34 chr17 23392307 23393376 -62045104 - L1MC1 LINE L1 -5034 1392 332 2278 157 45 29 chr17 23393376 23393416 -62045064 - MSTA LTR MaLR 0 428 390 1904 172 0 0 chr17 23393416 23393718 -62044762 + AluJb SINE Alu 1 302 -10 2278 157 45 29 chr17 23393718 23394098 -62044382 - MSTA LTR MaLR -38 390 1 7228 149 42 34 chr17 23394098 23394338 -62044142 - L1MC1 LINE L1 -6094 332 70 2214 97 3 32 chr17 23394338 23394646 -62043834 - AluSg1 SINE Alu -10 299 1 7228 149 42 34 chr17 23394646 23394700 -62043780 - L1MC1 LINE L1 -6356 70 18 651 213 52 30 chr17 23394711 23394905 -62043575 - L1M4c LINE L1 -4728 2229 1928 679 209 6 70 chr17 23394906 23395064 -62043416 + MLT1D LTR MaLR 1 148 -357 555 197 150 8 chr17 23395050 23395177 -62043303 + MLT1D LTR MaLR 341 485 -20 * 365 236 34 115 chr17 23395189 23395246 -62043234 - L1M4c LINE L1 -6655 204 144 2202 101 0 7 chr17 23395246 23395534 -62042946 - AluSx SINE Alu -24 288 3 365 236 34 115 chr17 23395534 23395684 -62042796 - L1M4c LINE L1 -6715 144 14 882 112 0 77 chr17 23395750 23395893 -62042587 - FLAM_C SINE Alu 0 133 2 4908 210 42 51 chr17 23395901 23397111 -62041369 - L1M1 LINE L1 -3957 3608 2412 2037 115 27 7 chr17 23397111 23397406 -62041074 - AluSx SINE Alu -11 301 1 4908 210 42 51 chr17 23397406 23397644 -62040836 - L1M1 LINE L1 -5153 2412 2173 817 189 0 0 chr17 23397656 23397788 -62040692 + FLAM_C SINE Alu 1 132 -11 672 197 0 23 chr17 23397799 23397931 -62040549 - AluJo SINE Alu -177 135 7 3298 160 42 0 chr17 23397964 23398490 -62039990 - L1M1 LINE L1 -4777 1788 1241 473 256 96 6 chr17 23399284 23399440 -62039040 + MIR SINE MIR 34 203 -59 1675 188 28 0 chr17 23399440 23399727 -62038753 - AluJb SINE Alu 0 312 18 2202 129 28 3 chr17 23399932 23400289 -62038191 - MER47A DNA MER2_type 0 366 1 2341 87 0 3 chr17 23400531 23400829 -62037651 - AluY SINE Alu -14 297 1 21 0 0 0 chr17 23401027 23401048 -62037432 + AT_rich Low_complexity Low_complexity 1 21 0 2178 122 0 0 chr17 23401048 23401336 -62037144 - AluSx SINE Alu -24 288 1 199 250 94 0 chr17 23401527 23401591 -62036889 + MIR SINE MIR 82 151 -57 1007 100 8 0 chr17 23402515 23402645 -62035835 + AluSq/x SINE Alu 6 136 -177 2186 123 7 0 chr17 23402645 23402946 -62035534 + AluSx SINE Alu 1 303 -9 226 181 403 0 chr17 23402971 23403043 -62035437 + MER4A LTR ERV1 1 101 -563 * 1605 115 7 147 chr17 23403042 23403374 -62035106 + MER4A LTR ERV1 263 590 -74 2774 143 50 23 chr17 23403374 23403851 -62034629 + LTR2B LTR ERV1 1 490 0 1605 115 7 147 chr17 23403851 23403917 -62034563 + MER4A LTR ERV1 590 664 0 2490 104 147 27 chr17 23403920 23404441 -62034039 + LTR2B-int LTR ERV1 1 628 -5970 5222 124 82 29 chr17 23404441 23405326 -62033154 + MER4A-int LTR ERV1 215 1146 -5612 540 0 0 0 chr17 23405332 23405392 -62033088 + (TG)n Simple_repeat Simple_repeat 2 61 0 2502 105 132 19 chr17 23405403 23405560 -62032920 + MER4A-int LTR ERV1 1798 1936 -4662 2220 82 41 0 chr17 23405560 23405852 -62032628 + AluY SINE Alu 1 304 -7 2502 105 132 19 chr17 23405852 23406172 -62032308 + MER4A-int LTR ERV1 1936 2329 -4269 2278 84 0 17 chr17 23406485 23406781 -62031699 - AluY SINE Alu -20 291 1 2070 133 3 0 chr17 23406787 23407088 -62031392 - AluSc SINE Alu -3 306 5 304 288 114 15 chr17 23407106 23407238 -62031242 - MIR SINE MIR -71 191 47 447 185 11 11 chr17 23407369 23407461 -62031019 - AluSp/q SINE Alu -10 303 212 1972 146 11 0 chr17 23407730 23408044 -62030436 + AluSx SINE Alu 1 317 0 1970 123 34 0 chr17 23408050 23408342 -62030138 + AluSx SINE Alu 1 302 -10 2503 41 7 10 chr17 23408479 23408774 -62029706 + AluY SINE Alu 1 294 -17 808 151 17 0 chr17 23408900 23409050 -62029430 + FRAM SINE Alu 26 177 0 373 174 14 0 chr17 23409064 23409133 -62029347 + LTR24B-int LTR ERV1 5054 5123 0 1333 222 47 102 chr17 23409133 23409329 -62029151 + LTR24B LTR ERV1 1 206 -370 2288 98 13 0 chr17 23409329 23409636 -62028844 - AluSp SINE Alu -2 311 1 1333 222 47 102 chr17 23409636 23409678 -62028802 + LTR24B LTR ERV1 206 249 -327 2109 146 0 0 chr17 23409678 23409986 -62028494 + AluJb SINE Alu 1 308 -4 1333 222 47 102 chr17 23409986 23410364 -62028116 + LTR24B LTR ERV1 249 576 0 280 275 38 69 chr17 23410681 23410841 -62027639 + MLT1I LTR MaLR 130 284 -125 2533 52 10 3 chr17 23410974 23411279 -62027201 - AluY SINE Alu -4 307 1 503 258 59 50 chr17 23411315 23411536 -62026944 - L1MC4a LINE L1 -1918 5890 5668 2153 168 33 32 chr17 23411536 23412086 -62026394 - MLT2A2 LTR ERVL 0 554 1 1266 228 53 41 chr17 23412365 23412707 -62025773 - MLT1I LTR MaLR 0 409 64 200 368 18 0 chr17 23412858 23412972 -62025508 + L2 LINE L2 2274 2389 -925 1705 163 3 39 chr17 23413144 23413451 -62025029 + AluJb SINE Alu 1 296 -16 180 0 0 0 chr17 23413453 23413473 -62025007 + (CA)n Simple_repeat Simple_repeat 2 21 0 1636 131 0 29 chr17 23414460 23414704 -62023776 + AluSx SINE Alu 38 274 -38 510 17 0 0 chr17 23414759 23414818 -62023662 + (TG)n Simple_repeat Simple_repeat 2 60 0 657 210 90 24 chr17 23415147 23415314 -62023166 + MER3 DNA MER1_type 28 205 -4 2040 121 3 13 chr17 23415521 23415826 -62022654 + AluSx SINE Alu 1 302 -10 777 272 48 41 chr17 23415987 23416159 -62022321 - L1MEc LINE L1 -4112 2149 1980 2032 137 3 3 chr17 23416159 23416451 -62022029 + AluJb SINE Alu 1 292 -20 777 272 48 41 chr17 23416451 23416694 -62021786 - L1MEc LINE L1 -4281 1980 1731 1149 291 106 39 chr17 23416706 23416784 -62021696 - L1MEc LINE L1 -4605 1656 1585 1723 155 69 0 chr17 23416784 23417074 -62021406 - AluSx SINE Alu -2 310 1 1149 291 106 39 chr17 23417074 23417261 -62021219 - L1MEc LINE L1 -4676 1585 1412 731 11 0 0 chr17 23417261 23417350 -62021130 - L1PB1 LINE L1 0 6151 6063 2225 96 3 35 chr17 23417354 23417668 -62020812 - AluSx SINE Alu -8 304 1 1149 291 106 39 chr17 23417668 23418141 -62020339 - L1MEc LINE L1 -4851 1410 862 1294 164 0 36 chr17 23418148 23418373 -62020107 - AluJb SINE Alu -11 301 85 925 124 0 0 chr17 23418375 23418504 -62019976 - AluJo/FLAM SINE Alu -173 129 1 1883 273 61 38 chr17 23418504 23418700 -62019780 - L1MEc LINE L1 -5242 828 638 2272 91 3 3 chr17 23418700 23418987 -62019493 + AluSp SINE Alu 1 287 -26 1883 273 61 38 chr17 23418987 23419581 -62018899 - L1MEc LINE L1 -5432 638 20 2455 50 3 0 chr17 23419741 23420024 -62018456 + AluY SINE Alu 1 308 0 184 42 0 0 chr17 23420024 23420048 -62018432 + (CAAAA)n Simple_repeat Simple_repeat 2 160 0 2084 139 0 0 chr17 23420254 23420541 -62017939 - AluSx SINE Alu -15 297 11 2049 91 65 7 chr17 23420545 23420820 -62017660 - AluY SINE Alu -20 291 1 31 0 0 0 chr17 23420820 23420851 -62017629 + AT_rich Low_complexity Low_complexity 1 31 0 676 268 36 27 chr17 23420927 23421151 -62017329 - MIR SINE MIR 0 262 37 1055 164 5 46 chr17 23421519 23421714 -62016766 - AluJb SINE Alu -44 268 82 294 272 48 13 chr17 23421714 23421898 -62016582 - L1MC/D LINE L1 -297 5824 5631 874 154 7 0 chr17 23422283 23422419 -62016061 - AluJb SINE Alu -16 296 160 730 244 49 125 chr17 23422443 23422527 -62015953 - L2 LINE L2 -26 3287 3198 2002 99 6 93 chr17 23422527 23422861 -62015619 + AluSx SINE Alu 1 305 -7 730 244 49 125 chr17 23422861 23423185 -62015295 - L2 LINE L2 -115 3198 2910 453 205 181 44 chr17 23423536 23423741 -62014739 + Charlie5 DNA MER1_type 2368 2600 -12 1942 106 14 0 chr17 23424480 23424762 -62013718 + AluSg SINE Alu 9 294 -16 260 238 32 16 chr17 23424890 23424953 -62013527 + CT-rich Low_complexity Low_complexity 4 67 0 1434 159 103 28 chr17 23425437 23425727 -62012753 - AluJo SINE Alu 0 312 1 283 167 100 17 chr17 23425771 23425831 -62012649 + AluJ/FRAM SINE Alu 226 290 -12 2038 98 51 4 chr17 23426078 23426354 -62012126 - AluSp SINE Alu -24 289 1 991 211 0 5 chr17 23426400 23426613 -62011867 + AluSc SINE Alu 2 213 -96 1289 114 6 0 chr17 23426973 23427148 -62011332 - AluSg/x SINE Alu 0 312 137 276 203 0 16 chr17 23427152 23427216 -62011264 + MLT1C LTR MaLR 405 467 0 230 276 9 29 chr17 23427527 23427632 -62010848 + L1MC5 LINE L1 7383 7485 -476 2115 132 0 3 chr17 23427736 23428031 -62010449 + AluSx SINE Alu 1 294 -18 537 192 165 50 chr17 23428166 23428427 -62010053 + pTR5 LTR ERV1 738 1028 -1410 4268 150 79 37 chr17 23428506 23429384 -62009096 + pTR5 LTR ERV1 1 2438 0 342 236 69 56 chr17 23429391 23429513 -62008967 + L1MDa LINE L1 1774 1900 -4640 2126 140 0 13 chr17 23429513 23429821 -62008659 - AluSx SINE Alu -8 304 1 342 236 69 56 chr17 23429821 23429842 -62008638 + L1MDa LINE L1 1900 1919 -4621 2181 129 3 0 chr17 23429859 23430153 -62008327 + AluSx SINE Alu 1 295 -17 29 47 0 0 chr17 23430164 23430207 -62008273 + AT_rich Low_complexity Low_complexity 1 43 0 353 330 26 0 chr17 23430212 23430327 -62008153 + L1MDa LINE L1 1948 2065 -4475 662 162 0 0 chr17 23430334 23430433 -62008047 + AluJ/FLAM SINE Alu 2 100 -212 1461 185 0 23 chr17 23430434 23430693 -62007787 + AluJb SINE Alu 41 293 -19 832 228 114 43 chr17 23430697 23430850 -62007630 + L1M4 LINE L1 4739 4880 -1266 1550 161 77 32 chr17 23430850 23431135 -62007345 + AluJb SINE Alu 1 298 -14 2192 111 7 0 chr17 23431137 23431425 -62007055 + AluSq SINE Alu 3 292 -21 832 228 114 43 chr17 23431425 23431751 -62006729 + L1M4 LINE L1 4880 5255 -891 2114 117 19 64 chr17 23431753 23432315 -62006165 - MER51A LTR ERV1 0 634 1 3880 146 27 19 chr17 23432315 23433295 -62005185 - L1M2 LINE L1 -647 5644 4663 2235 100 0 27 chr17 23433295 23433595 -62004885 - AluSq SINE Alu -18 295 4 3880 146 27 19 chr17 23433595 23433648 -62004832 - L1M2 LINE L1 -1628 4663 4612 2754 156 55 6 chr17 23433648 23434135 -62004345 + MER9 LTR ERVK 1 511 0 11632 130 41 42 chr17 23434135 23435142 -62003338 + HERVK9 LTR ERVK 1 1008 -4937 188 228 0 88 chr17 23435142 23435199 -62003281 + MER5B DNA MER1_type 58 109 -69 11632 130 41 42 chr17 23435199 23436392 -62002088 + HERVK9 LTR ERVK 1008 2253 -3692 1719 188 88 21 chr17 23436438 23436869 -62001611 - MLT1C LTR MaLR -7 460 1 830 187 39 7 chr17 23437104 23437259 -62001221 - AluJb SINE Alu -11 301 142 2395 191 18 107 chr17 23437482 23438136 -62000344 - MER77 LTR ERV1 -9 596 1 346 286 40 0 chr17 23438337 23438463 -62000017 + L2 LINE L2 2887 3017 -296 261 176 12 106 chr17 23438791 23438876 -61999604 + MLT1J LTR MaLR 1 77 -434 2145 107 3 30 chr17 23438965 23439263 -61999217 + AluSp SINE Alu 1 290 -23 525 177 8 15 chr17 23439268 23439398 -61999082 + GA-rich Low_complexity Low_complexity 4 132 0 553 197 24 0 chr17 23439422 23439549 -61998931 + MLT1J-int LTR MaLR 1242 1371 0 334 166 0 2 chr17 23439586 23439650 -61998830 + MLT1D LTR MaLR 400 500 -5 1518 250 37 21 chr17 23439720 23440156 -61998324 - LTR47B LTR ERVL 0 443 1 2151 102 0 36 chr17 23440195 23440500 -61997980 + AluSg SINE Alu 1 294 -16 1948 161 0 3 chr17 23440577 23440869 -61997611 + AluJo SINE Alu 1 291 -21 351 288 0 52 chr17 23440882 23441035 -61997445 + MLT1J LTR MaLR 115 259 -252 237 216 16 112 chr17 23441115 23441240 -61997240 + MLT1J LTR MaLR 392 504 -7 415 250 155 0 chr17 23441540 23441688 -61996792 - MER112 DNA MER1_type -9 251 81 667 202 91 66 chr17 23441689 23441895 -61996585 - MER2 DNA MER2_type 0 345 130 2060 116 3 11 chr17 23441895 23442213 -61996267 + AluSx SINE Alu 1 316 0 667 202 91 66 chr17 23442213 23442248 -61996232 - MER2 DNA MER2_type -215 130 97 240 242 170 52 chr17 23442458 23442611 -61995869 - MIR3 SINE MIR -20 188 18 1210 202 131 18 chr17 23443025 23443361 -61995119 - MLT1D LTR MaLR -7 498 125 285 203 51 0 chr17 23443388 23443447 -61995033 - MLT1D LTR MaLR -442 63 2 1702 164 6 53 chr17 23443585 23443908 -61994572 + AluJo SINE Alu 2 309 -3 705 223 159 116 chr17 23444187 23444491 -61993989 - L2 LINE L2 -185 3128 2838 393 22 0 0 chr17 23444491 23444537 -61993943 + (TG)n Simple_repeat Simple_repeat 1 46 0 705 223 159 116 chr17 23444537 23444578 -61993902 - L2 LINE L2 -475 2838 2800 2335 96 0 3 chr17 23444578 23444879 -61993601 - AluSg SINE Alu -10 300 1 705 223 159 116 chr17 23444879 23444915 -61993565 - L2 LINE L2 -513 2800 2767 2294 147 75 14 chr17 23444915 23445320 -61993160 - L1MB5 LINE L1 0 6174 5742 2415 77 3 0 chr17 23445320 23445618 -61992862 - AluSp SINE Alu -14 299 1 705 223 159 116 chr17 23445628 23445843 -61992637 - L2 LINE L2 -546 2767 2500 248 314 14 0 chr17 23446798 23446868 -61991612 + MIR SINE MIR 82 152 -110 180 346 0 0 chr17 23446888 23446940 -61991540 + L2 LINE L2 3239 3290 -23 1500 199 26 24 chr17 23447050 23447491 -61990989 + LTR2B LTR ERV1 1 490 0 766 190 95 71 chr17 23447503 23447528 -61990952 - MIR SINE MIR -26 236 213 1939 144 10 19 chr17 23447528 23447841 -61990639 - AluSx SINE Alu 0 312 3 766 190 95 71 chr17 23447841 23448026 -61990454 - MIR SINE MIR -49 213 21 287 100 0 0 chr17 23448026 23448093 -61990387 - Alu SINE Alu 0 300 234 2040 124 0 0 chr17 23448093 23448366 -61990114 - AluSx SINE Alu -26 286 14 293 331 31 16 chr17 23448751 23448878 -61989602 + MIR SINE MIR 84 212 -50 2136 123 0 0 chr17 23448893 23449209 -61989271 + AluSq SINE Alu 1 316 0 2312 108 0 0 chr17 23449370 23449665 -61988815 + AluSg SINE Alu 1 295 -15 424 225 268 0 chr17 23449928 23450070 -61988410 + MER5A DNA MER1_type 4 183 -6 432 249 41 45 chr17 23450078 23450299 -61988181 + LTR37B LTR ERV1 249 468 0 372 286 14 34 chr17 23450382 23450529 -61987951 + LTR67 LTR ERVL 23 166 -391 612 175 0 18 chr17 23450645 23450759 -61987721 - FLAM_C SINE Alu 0 143 32 292 200 31 0 chr17 23450760 23450825 -61987655 + MER52A LTR ERV1 1 67 -1688 7958 176 66 42 chr17 23451306 23452955 -61985525 + MER52A LTR ERV1 68 1755 0 1096 141 0 0 chr17 23453018 23453231 -61985249 - AluSg/x SINE Alu 0 346 134 2221 92 0 4 chr17 23453231 23453512 -61984968 - AluSc SINE Alu -20 289 10 1241 120 0 6 chr17 23453512 23453679 -61984801 - AluSx SINE Alu -146 166 1 1301 180 16 8 chr17 23454313 23454558 -61983922 + AluJo SINE Alu 64 310 -2 599 316 42 81 chr17 23454579 23455009 -61983471 + L1MC4 LINE L1 7628 8040 -2 1042 224 138 26 chr17 23455043 23455426 -61983054 + LTR42 LTR ERVL 1 426 -69 2469 58 0 3 chr17 23455644 23455936 -61982544 + AluY SINE Alu 1 291 -20 215 256 55 30 chr17 23456236 23456400 -61982080 + (CCCCAG)n Simple_repeat Simple_repeat 1 168 0 377 278 4 34 chr17 23456664 23456922 -61981558 + G-rich Low_complexity Low_complexity 1 250 0 27 0 0 0 chr17 23457176 23457203 -61981277 + GC_rich Low_complexity Low_complexity 1 27 0 2207 126 0 7 chr17 23457590 23457892 -61980588 - AluSx SINE Alu -12 300 1 1244 147 119 162 chr17 23458045 23458163 -61980317 - LTR65 LTR ERV1 -14 655 533 2256 58 25 0 chr17 23458163 23458468 -61980012 - AluY SINE Alu 0 312 1 1244 147 119 162 chr17 23458468 23458675 -61979805 - LTR65 LTR ERV1 -136 533 355 2000 85 0 0 chr17 23458675 23458954 -61979526 - AluY SINE Alu 0 314 36 1244 147 119 162 chr17 23458954 23459130 -61979350 - LTR65 LTR ERV1 -314 355 173 2128 111 24 0 chr17 23459721 23460010 -61978470 - AluSx SINE Alu -16 296 1 2432 63 0 23 chr17 23460384 23460687 -61977793 + AluY SINE Alu 1 296 -15 2429 82 3 0 chr17 23460700 23460994 -61977486 + AluSp SINE Alu 1 295 -18 713 186 0 7 chr17 23460997 23461137 -61977343 + MER3 DNA MER1_type 31 122 -87 291 162 73 0 chr17 23461145 23461213 -61977267 + MER3 DNA MER1_type 2234 2306 0 1528 254 30 98 chr17 23461276 23462054 -61976426 - L1MEc LINE L1 -5368 1028 304 343 238 36 0 chr17 23462080 23462164 -61976316 + MER81 DNA DNA 2 88 -26 2355 87 3 0 chr17 23462300 23462588 -61975892 - AluSg SINE Alu -21 289 1 1137 107 17 0 chr17 23462588 23462766 -61975714 + MER4A-int LTR ERV1 2315 2495 -4103 1214 145 107 8 chr17 23462766 23463000 -61975480 - LTR8 LTR ERV1 -434 257 1 2617 88 68 53 chr17 23463000 23463460 -61975020 + MER4A-int LTR ERV1 2737 3208 -3390 2339 89 0 22 chr17 23463460 23463773 -61974707 + AluY SINE Alu 2 307 -4 2617 88 68 53 chr17 23463773 23463844 -61974636 + MER4A-int LTR ERV1 3208 3276 -3322 279 0 0 0 chr17 23463849 23463880 -61974600 + (TG)n Simple_repeat Simple_repeat 2 32 0 249 31 0 0 chr17 23463880 23463906 -61974574 + (TA)n Simple_repeat Simple_repeat 2 27 0 890 111 0 0 chr17 23463973 23464090 -61974390 + AluY SINE Alu 24 140 -171 2155 97 32 32 chr17 23464091 23464225 -61974255 + AluY SINE Alu 1 134 -177 2387 91 3 0 chr17 23464225 23464521 -61973959 + AluSp SINE Alu 1 297 -16 2155 97 32 32 chr17 23464521 23464695 -61973785 + AluY SINE Alu 133 309 -2 2049 143 0 28 chr17 23464702 23465023 -61973457 + AluSx SINE Alu 1 312 0 2178 112 0 14 chr17 23465126 23465441 -61973039 + AluSx SINE Alu 1 311 0 809 110 18 0 chr17 23465451 23465560 -61972920 - AluSp/q SINE Alu -10 303 193 15431 88 69 21 chr17 23465564 23465664 -61972816 + MER4A-int LTR ERV1 3987 4081 -2517 2341 96 7 10 chr17 23465664 23465965 -61972515 - AluSq SINE Alu -13 300 1 15431 88 69 21 chr17 23465965 23468354 -61970126 + MER4A-int LTR ERV1 4081 6596 -2 281 97 375 14 chr17 23468362 23468434 -61970046 + MER4A LTR ERV1 1 98 -566 1844 132 3 41 chr17 23468434 23468792 -61969688 + MER4A LTR ERV1 261 664 0 546 324 124 9 chr17 23468829 23469054 -61969426 - MIR SINE MIR 0 262 12 1881 149 28 101 chr17 23469172 23469421 -61969059 + MER57A LTR ERV1 1 208 -195 1945 155 13 7 chr17 23469421 23469600 -61968880 - AluJo SINE Alu 0 312 129 198 91 0 0 chr17 23469600 23469633 -61968847 + (TCTA)n Simple_repeat Simple_repeat 4 36 0 1945 155 13 7 chr17 23469633 23469763 -61968717 - AluJo SINE Alu -183 129 1 1881 149 28 101 chr17 23469763 23469937 -61968543 + MER57A LTR ERV1 208 393 -10 4477 112 8 0 chr17 23470280 23470904 -61967576 + MER41B LTR ERV1 7 635 0 1515 176 73 147 chr17 23471285 23471563 -61966917 + MER67C LTR ERV1 8 305 -405 2003 94 33 0 chr17 23471563 23471866 -61966614 - AluSx SINE Alu 0 312 1 1515 176 73 147 chr17 23471866 23472245 -61966235 + MER67C LTR ERV1 305 617 -93 1840 162 3 0 chr17 23472247 23472550 -61965930 - AluJo SINE Alu 0 312 9 839 298 70 31 chr17 23472585 23472971 -61965509 + L2 LINE L2 2912 3312 -1 248 0 0 30 chr17 23473038 23473071 -61965409 + (TTG)n Simple_repeat Simple_repeat 2 33 0 2331 58 0 22 chr17 23473087 23473261 -61965219 - AluSq SINE Alu -9 304 139 2133 85 3 10 chr17 23473261 23473566 -61964914 - AluY SINE Alu -8 303 1 2331 58 0 22 chr17 23473566 23473702 -61964778 - AluSq SINE Alu -174 139 1 816 176 14 7 chr17 23473703 23473851 -61964629 - AluJb SINE Alu -31 281 133 502 247 88 6 chr17 23473851 23474021 -61964459 + MIR SINE MIR 79 262 0 643 285 61 11 chr17 23474262 23474504 -61963976 - MIR SINE MIR -8 254 6 1003 283 99 11 chr17 23475240 23475787 -61962693 + L1M4 LINE L1 4698 5292 -854 242 240 77 67 chr17 23475951 23476159 -61962321 - L1MC4a LINE L1 -1746 6062 5853 24 32 0 0 chr17 23476191 23476222 -61962258 + AT_rich Low_complexity Low_complexity 1 31 0 2248 103 4 1 chr17 23476342 23476814 -61961666 + MER51A LTR ERV1 1 634 0 1940 123 10 7 chr17 23477034 23477335 -61961145 + AluSx SINE Alu 1 302 -10 2658 203 92 36 chr17 23477372 23477867 -61960613 + L1MC/D LINE L1 2 542 -5998 2299 90 0 3 chr17 23477867 23478177 -61960303 - AluSc SINE Alu 0 309 1 2658 203 92 36 chr17 23478177 23478320 -61960160 + L1MC/D LINE L1 542 676 -5864 1235 267 59 32 chr17 23478344 23478752 -61959728 - LTR47B LTR ERVL -24 419 1 1601 202 156 3 chr17 23478752 23479143 -61959337 + L1MC/D LINE L1 676 1126 -5414 2291 99 3 0 chr17 23479144 23479456 -61959024 + AluSp SINE Alu 1 313 0 488 219 0 0 chr17 23479480 23479576 -61958904 + AluJ/FLAM SINE Alu 1 96 -216 1338 160 0 61 chr17 23479858 23480152 -61958328 + AluJo SINE Alu 27 302 -10 2821 206 44 61 chr17 23480152 23480320 -61958160 + L1MC/D LINE L1 4715 4884 -1656 1546 156 52 21 chr17 23480320 23480608 -61957872 + AluJb SINE Alu 1 297 -15 2821 206 44 61 chr17 23480608 23480860 -61957620 + L1MC/D LINE L1 4884 5139 -1401 1755 168 0 10 chr17 23480860 23481164 -61957316 - AluJo SINE Alu -11 301 1 2821 206 44 61 chr17 23481164 23481720 -61956760 + L1MC/D LINE L1 5139 5675 -865 816 142 0 17 chr17 23481721 23481841 -61956639 + FLAM_C SINE Alu 1 118 -25 954 164 10 39 chr17 23481856 23482063 -61956417 + L1MC/D LINE L1 5666 5866 -887 1753 142 7 23 chr17 23482870 23483173 -61955307 + AluSx SINE Alu 1 298 -14 297 167 0 0 chr17 23483273 23483327 -61955153 + A-rich Low_complexity Low_complexity 1 54 0 372 174 6 180 chr17 23483338 23483505 -61954975 - MLT1B LTR MaLR -73 317 180 333 256 12 0 chr17 23483558 23483640 -61954840 - MLT1-int LTR MaLR -660 711 629 21 0 0 0 chr17 23483641 23483662 -61954818 + AT_rich Low_complexity Low_complexity 1 21 0 1705 174 0 7 chr17 23483670 23483964 -61954516 + AluJb SINE Alu 1 292 -20 1028 160 105 0 chr17 23483978 23484159 -61954321 - MER51A LTR ERV1 -434 200 1 238 187 42 18 chr17 23484159 23484242 -61954238 + L1ME2 LINE L1 5254 5335 -811 1463 112 48 64 chr17 23484244 23484347 -61954133 + L1MA8 LINE L1 5846 5949 -342 1867 151 3 3 chr17 23484347 23484646 -61953834 + AluJb SINE Alu 1 299 -13 1463 112 48 64 chr17 23484646 23484837 -61953643 + L1MA8 LINE L1 5949 6135 -156 913 223 73 51 chr17 23484808 23485082 -61953398 + L1ME2 LINE L1 5310 5589 -575 * 681 99 0 0 chr17 23485099 23485200 -61953280 - AluSg/x SINE Alu -1 311 211 1797 224 37 20 chr17 23485200 23485659 -61952821 + L1ME2 LINE L1 5582 6048 -116 794 232 16 4 chr17 23485768 23486022 -61952458 - L1M4c LINE L1 -4033 2351 2095 799 302 47 4 chr17 23486035 23486290 -61952190 + ERVL LTR ERVL 5166 5431 -333 48 0 0 0 chr17 23486730 23486778 -61951702 + AT_rich Low_complexity Low_complexity 1 48 0 426 129 0 0 chr17 23486778 23486840 -61951640 - AluS SINE Alu -255 63 2 203 146 24 0 chr17 23487271 23487312 -61951168 + T-rich Low_complexity Low_complexity 2 43 0 43 56 0 0 chr17 23487511 23487582 -61950898 + AT_rich Low_complexity Low_complexity 1 71 0 2016 135 13 0 chr17 23487607 23487910 -61950570 + AluJo SINE Alu 1 307 -5 1981 113 17 3 chr17 23487911 23488203 -61950277 + AluSx SINE Alu 1 296 -16 1916 121 0 56 chr17 23488523 23488695 -61949785 - AluSx SINE Alu -8 304 157 2319 74 3 0 chr17 23488695 23488993 -61949487 - AluSq SINE Alu -14 299 1 1916 121 0 56 chr17 23488993 23489142 -61949338 - AluSx SINE Alu -155 157 1 264 284 199 14 chr17 23489148 23489289 -61949191 - MIR SINE MIR -56 206 40 214 283 0 0 chr17 23489320 23489366 -61949114 - MIR SINE MIR -5 257 212 249 33 0 0 chr17 23489379 23489409 -61949071 + (TCCA)n Simple_repeat Simple_repeat 4 33 0 1214 153 12 68 chr17 23489412 23489661 -61948819 - Tigger2 DNA MER2_type 0 2718 2484 1188 126 0 0 chr17 23489662 23489837 -61948643 + AluJb SINE Alu 137 311 -1 778 87 117 152 chr17 23489838 23489864 -61948616 - Tigger2 DNA MER2_type -205 2513 2488 1916 139 7 0 chr17 23489864 23490165 -61948315 + AluJb SINE Alu 1 303 -9 778 87 117 152 chr17 23490165 23490368 -61948112 - Tigger2 DNA MER2_type -230 2488 2292 362 190 0 0 chr17 23490378 23490436 -61948044 + MER8 DNA MER2_type 182 239 0 205 97 0 0 chr17 23490444 23490475 -61948005 - MIR SINE MIR -73 189 159 1665 183 0 3 chr17 23490555 23490866 -61947614 + AluJo SINE Alu 1 310 -2 2187 94 10 13 chr17 23491085 23491393 -61947087 - AluY SINE Alu -4 307 1 310 195 103 23 chr17 23491489 23491576 -61946904 - MIR SINE MIR -104 158 65 434 296 30 86 chr17 23491761 23491994 -61946486 - L2 LINE L2 -46 3226 3007 1321 191 39 48 chr17 23492032 23492341 -61946139 + AluJo SINE Alu 1 306 -6 2052 130 7 0 chr17 23492341 23492649 -61945831 + AluSx SINE Alu 1 310 -2 1232 238 194 39 chr17 23492705 23493196 -61945284 - MLT1G1 LTR MaLR -28 567 1 2344 75 0 10 chr17 23493395 23493702 -61944778 - AluY SINE Alu -7 304 1 243 224 45 0 chr17 23494023 23494090 -61944390 - MIR SINE MIR -44 218 149 1373 94 35 0 chr17 23494092 23494295 -61944185 - AluSg/x SINE Alu -17 295 86 470 259 107 8 chr17 23494297 23494428 -61944052 - MIR SINE MIR -112 150 7 247 286 71 0 chr17 23494587 23494616 -61943864 - L1ME3 LINE L1 -1 6161 6135 2053 105 0 0 chr17 23494616 23494901 -61943579 + AluSx SINE Alu 12 296 -16 247 286 71 0 chr17 23494901 23494969 -61943511 - L1ME3 LINE L1 -27 6135 6057 * 504 164 170 18 chr17 23494965 23495130 -61943350 + L1ME3 LINE L1 5853 6042 -120 201 147 0 0 chr17 23495364 23495398 -61943082 + (T)n Simple_repeat Simple_repeat 1 34 0 2210 79 6 29 chr17 23496051 23496366 -61942114 - AluSg SINE Alu -2 308 1 949 78 39 0 chr17 23496370 23496498 -61941982 - AluSq/x SINE Alu -180 133 1 2210 87 17 0 chr17 23497055 23497354 -61941126 - AluSp SINE Alu -9 304 1 1727 97 27 85 chr17 23497375 23497706 -61940774 - AluSx SINE Alu 0 312 1 2182 51 0 0 chr17 23497712 23497986 -61940494 - AluY SINE Alu -8 303 30 2413 145 20 2 chr17 23498223 23498617 -61939863 - MER57A LTR ERV1 -2 401 1 1895 135 0 0 chr17 23498818 23499129 -61939351 + AluSx SINE Alu 1 311 0 1558 162 48 14 chr17 23499157 23499447 -61939033 + AluJo SINE Alu 1 300 -12 2318 72 0 26 chr17 23499449 23499756 -61938724 + AluY SINE Alu 1 299 -12 2139 70 3 30 chr17 23499757 23500056 -61938424 + AluY SINE Alu 1 291 -20 2192 87 3 0 chr17 23500427 23500713 -61937767 + AluSx SINE Alu 5 291 -21 23 0 0 0 chr17 23500713 23500736 -61937744 + AT_rich Low_complexity Low_complexity 1 23 0 2400 192 99 48 chr17 23500809 23501414 -61937066 + LTR27 LTR ERV1 1 636 0 2815 92 12 12 chr17 23501419 23501823 -61936657 - MER4A LTR ERV1 0 664 261 677 111 0 10 chr17 23501823 23501922 -61936558 - MER4A LTR ERV1 -566 98 1 2120 60 63 7 chr17 23502068 23502352 -61936128 - AluY SINE Alu -11 300 1 4741 132 74 46 chr17 23502365 23502930 -61935550 - MER4D LTR ERV1 0 903 356 1916 116 53 0 chr17 23502930 23503214 -61935266 - AluSx SINE Alu -12 300 2 4741 132 74 46 chr17 23503214 23503491 -61934989 - MER4D LTR ERV1 -547 356 33 8210 50 16 10 chr17 23503491 23504492 -61933988 - LTR13 LTR ERVK 0 1007 1 4741 132 74 46 chr17 23504492 23504526 -61933954 - MER4D LTR ERV1 -870 33 1 5047 115 34 4 chr17 23504586 23505341 -61933139 + MER4E LTR ERV1 1 778 -1 435 324 24 19 chr17 23505343 23505550 -61932930 + PABL_B-int LTR ERV1 6419 6626 -496 1296 140 63 14 chr17 23505554 23505775 -61932705 + MER4D LTR ERV1 1 232 -671 1050 55 11 44 chr17 23505875 23506057 -61932423 + AluSg/x SINE Alu 124 299 -13 1874 136 13 0 chr17 23506316 23506624 -61931856 - AluJb SINE Alu 0 312 1 27 0 0 0 chr17 23506755 23506782 -61931698 + AT_rich Low_complexity Low_complexity 1 27 0 515 151 47 0 chr17 23506782 23506868 -61931612 - FLAM_C SINE Alu -26 117 28 891 155 53 71 chr17 23507032 23507258 -61931222 - L1MD2 LINE L1 -10 6349 6128 * 6811 221 69 11 chr17 23507256 23508956 -61929524 - L1MC3 LINE L1 -167 7618 5825 2501 52 0 3 chr17 23508956 23509263 -61929217 - AluY SINE Alu -5 306 1 6811 221 69 11 chr17 23509263 23509311 -61929169 - L1MC3 LINE L1 -1960 5825 5781 360 201 19 115 chr17 23509311 23509520 -61928960 - L1MC5 LINE L1 -431 7530 7342 463 198 9 66 chr17 23510004 23510110 -61928370 - Tigger7 DNA MER2_type -1 2490 2391 * 2405 182 53 18 chr17 23510100 23510594 -61927886 - Tigger7 DNA MER2_type -222 511 1 2119 92 7 3 chr17 23510963 23511258 -61927222 + AluSx SINE Alu 1 296 -16 1837 122 58 0 chr17 23512059 23512354 -61926126 - AluJb SINE Alu 0 312 1 400 208 50 10 chr17 23512425 23512526 -61925954 - MLT1C LTR MaLR -15 452 348 1916 169 21 12 chr17 23512685 23513022 -61925458 - MER7A DNA MER2_type -7 339 2 436 286 101 14 chr17 23513602 23513867 -61924613 - L1ME3 LINE L1 -267 5895 5592 1262 249 166 26 chr17 23513882 23514569 -61923911 - L1MC4 LINE L1 -2 8040 7258 309 109 0 0 chr17 23514597 23514643 -61923837 + (CATA)n Simple_repeat Simple_repeat 1 46 0 1902 165 32 0 chr17 23514650 23514965 -61923515 - MER2 DNA MER2_type -20 325 1 365 264 31 39 chr17 23514983 23515112 -61923368 - L1MB5 LINE L1 0 6174 6047 1199 225 31 17 chr17 23515116 23515409 -61923071 - L1MB5 LINE L1 -166 6008 5712 492 225 43 22 chr17 23515421 23515559 -61922921 - L1MC4 LINE L1 -800 7242 7102 1955 129 7 3 chr17 23517030 23517325 -61921155 - AluSx SINE Alu -16 296 1 1577 119 15 128 chr17 23517701 23517918 -61920562 - AluJo SINE Alu -1 301 134 1990 86 31 14 chr17 23517918 23518208 -61920272 + AluSc SINE Alu 1 295 -14 1577 119 15 128 chr17 23518208 23518327 -61920153 - AluJo SINE Alu -168 134 3 1564 168 39 11 chr17 23518399 23518684 -61919796 + AluJb SINE Alu 12 304 -8 1826 89 8 0 chr17 23518787 23519034 -61919446 - AluSx SINE Alu -63 249 1 3017 197 65 41 chr17 23519036 23520027 -61918453 - L1MB5 LINE L1 -35 6139 5115 1791 150 3 10 chr17 23520027 23520327 -61918153 - AluJb SINE Alu -14 298 1 3017 197 65 41 chr17 23520327 23520585 -61917895 - L1MB5 LINE L1 -1059 5115 4865 439 332 27 11 chr17 23521100 23521287 -61917193 - MIR SINE MIR -52 210 21 1845 136 31 3 chr17 23521345 23521639 -61916841 - AluJb SINE Alu -8 304 3 3033 129 19 25 chr17 23521665 23522178 -61916302 - L1PA13 LINE L1 -7 6156 5647 2381 71 0 0 chr17 23522198 23522492 -61915988 - AluY SINE Alu -15 296 3 189 0 0 0 chr17 23522609 23522630 -61915850 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 1902 153 3 3 chr17 23522886 23523194 -61915286 - AluSx SINE Alu -4 308 1 273 57 0 0 chr17 23524731 23524766 -61913714 + (T)n Simple_repeat Simple_repeat 1 35 0 183 357 62 0 chr17 23526056 23526168 -61912312 - L2 LINE L2 -10 3262 3144 1597 157 68 0 chr17 23526295 23526576 -61911904 - AluJb SINE Alu -12 300 1 520 275 13 27 chr17 23527776 23527925 -61910555 + MER58B DNA MER1_type 195 341 0 1086 307 60 16 chr17 23528088 23528534 -61909946 - L1ME1 LINE L1 -6 6160 5695 518 259 130 0 chr17 23529987 23530149 -61908331 - MER5A DNA MER1_type -2 187 5 2244 60 4 0 chr17 23530912 23531217 -61907263 - AluY SINE Alu 0 306 1 842 149 0 8 chr17 23532734 23532868 -61905612 - FLAM_A SINE Alu 0 133 1 1820 126 65 0 chr17 23534329 23534607 -61903873 - AluSx SINE Alu -13 299 4 880 132 0 111 chr17 23534831 23535020 -61903460 - FRAM SINE Alu -15 161 1 2116 118 0 13 chr17 23535024 23535337 -61903143 - AluSx SINE Alu -3 309 1 2183 114 3 3 chr17 23535893 23536201 -61902279 - AluSp SINE Alu -5 308 1 551 268 95 0 chr17 23536212 23536380 -61902100 - L1MD1 LINE L1 0 6242 6059 1213 236 62 21 chr17 23536383 23536769 -61901711 - L1MD1 LINE L1 -232 6010 5609 464 226 97 77 chr17 23537488 23537643 -61900837 - MER58C DNA MER1_type 0 215 58 2272 88 0 0 chr17 23538207 23538502 -61899978 + AluSc SINE Alu 1 295 -14 765 243 205 35 chr17 23538826 23539230 -61899250 - MLT1D LTR MaLR -6 499 27 2140 117 7 0 chr17 23541078 23541385 -61897095 - AluSq SINE Alu -4 309 1 653 253 269 0 chr17 23543373 23543622 -61894858 - MER58B DNA MER1_type 0 341 26 1935 100 75 0 chr17 23543943 23544224 -61894256 - AluSq SINE Alu -11 302 1 431 349 33 19 chr17 23546128 23546340 -61892140 - ERVL LTR ERVL -810 4954 4740 562 331 87 13 chr17 23546411 23546943 -61891537 - ERVL LTR ERVL -1143 4621 3963 332 256 163 69 chr17 23550735 23551098 -61887382 + MLT1H LTR MaLR 115 511 -38 403 351 21 16 chr17 23551477 23551668 -61886812 + L1MC4a LINE L1 5697 5888 -1920 216 0 0 0 chr17 23551840 23551864 -61886616 + (A)n Simple_repeat Simple_repeat 1 24 0 269 319 0 0 chr17 23552705 23552774 -61885706 + (TG)n Simple_repeat Simple_repeat 1 69 0 183 347 106 33 chr17 23553988 23554262 -61884218 + L2 LINE L2 1991 2284 -1030 1135 252 93 32 chr17 23554377 23554817 -61883663 + MLT1C LTR MaLR 1 467 0 394 120 40 50 chr17 23555440 23555540 -61882940 + LTR52 LTR ERVL 201 299 -122 535 212 15 6 chr17 23555647 23555796 -61882684 - L1P LINE L1 -1561 4585 4432 261 228 76 43 chr17 23555817 23555909 -61882571 + LTR52 LTR ERVL 316 410 -11 193 219 0 47 chr17 23555984 23556048 -61882432 + L2 LINE L2 2917 2977 -295 2045 133 7 0 chr17 23556069 23556370 -61882110 - AluSq SINE Alu -10 303 1 196 329 0 13 chr17 23556463 23556539 -61881941 - MIR SINE MIR -73 135 61 274 320 56 25 chr17 23557426 23557563 -61880917 + MIR SINE MIR 21 159 -49 3688 110 25 8 chr17 23557774 23558365 -61880115 - L1PA16 LINE L1 -105 6061 5461 2154 103 7 3 chr17 23558464 23558766 -61879714 - AluSp SINE Alu -10 303 1 7163 62 7 27 chr17 23558781 23560074 -61878406 - SVA Other Other -683 1386 393 21 36 0 0 chr17 23560125 23560153 -61878327 + GC_rich Low_complexity Low_complexity 1 28 0 505 259 191 0 chr17 23560333 23560495 -61877985 + MIR SINE MIR 58 250 -12 2182 90 0 32 chr17 23561044 23561355 -61877125 - AluSp SINE Alu -12 301 1 422 219 26 44 chr17 23561508 23561622 -61876858 + MIR SINE MIR 12 123 -139 * 446 254 141 27 chr17 23561618 23561803 -61876677 - L2 LINE L2 -10 3303 3098 287 259 164 31 chr17 23561831 23562117 -61876363 + L1MC5 LINE L1 7603 7926 -35 538 286 103 5 chr17 23562143 23562367 -61876113 - L2 LINE L2 -188 3084 2839 259 223 223 0 chr17 23562720 23562823 -61875657 + MIR3 SINE MIR 15 140 -68 497 306 26 91 chr17 23562834 23563262 -61875218 + L2 LINE L2 2855 3254 -18 684 300 16 15 chr17 23563343 23563585 -61874895 - L1ME3 LINE L1 -8 6162 5927 323 262 99 21 chr17 23563586 23563727 -61874753 - L1ME3 LINE L1 -269 5893 5742 1513 187 55 3 chr17 23563823 23564112 -61874368 + AluJo SINE Alu 1 304 -8 1335 289 132 68 chr17 23564119 23565275 -61873205 + HAL1 LINE L1 3 1233 -1274 2043 91 3 11 chr17 23565375 23565662 -61872818 + AluSc SINE Alu 25 309 0 3475 200 56 21 chr17 23565669 23565727 -61872753 + L1MB4 LINE L1 5277 5332 -848 2086 95 0 3 chr17 23565727 23566040 -61872440 + AluY SINE Alu 1 312 0 3475 200 56 21 chr17 23566040 23566821 -61871659 + L1MB4 LINE L1 5332 6146 -34 396 333 75 11 chr17 23567264 23567450 -61871030 + MIR SINE MIR 47 244 -18 301 242 0 17 chr17 23567937 23568057 -61870423 + GA-rich Low_complexity Low_complexity 3 120 0 32 26 0 0 chr17 23568613 23568652 -61869828 + AT_rich Low_complexity Low_complexity 1 39 0 786 231 19 0 chr17 23568658 23568814 -61869666 - AluJo/FRAM SINE Alu -21 291 133 252 0 0 0 chr17 23768916 23768944 -61669536 + (A)n Simple_repeat Simple_repeat 1 28 0 206 274 0 41 chr17 23768952 23769025 -61669455 - MIR3 SINE MIR -46 162 93 377 272 58 0 chr17 23769140 23769243 -61669237 - L2 LINE L2 -13 3300 3192 26 0 0 0 chr17 23769314 23769340 -61669140 + AT_rich Low_complexity Low_complexity 1 26 0 931 226 107 16 chr17 23770082 23770391 -61668089 + Zaphod DNA AcHobo 3694 4030 -1 2104 147 0 3 chr17 23770637 23770949 -61667531 + AluSx SINE Alu 1 311 -1 2142 119 0 7 chr17 23770972 23771274 -61667206 + AluSg SINE Alu 1 300 -10 234 269 0 0 chr17 23771347 23771399 -61667081 + MER5A DNA MER1_type 55 106 -83 2078 126 0 0 chr17 23771412 23771689 -61666791 + AluSq SINE Alu 1 277 -36 727 191 13 13 chr17 23771789 23771941 -61666539 + L1M4 LINE L1 3544 3695 -2451 258 287 22 59 chr17 23772132 23772268 -61666212 - L1ME3A LINE L1 -9 6161 6031 1105 242 4 0 chr17 23772397 23772628 -61665852 + ERVL-F LTR ERVL 5106 5337 -427 463 130 9 157 chr17 23772624 23772671 -61665809 + ERVL-F LTR ERVL 4544 4568 -1196 * 2011 127 3 43 chr17 23772671 23772994 -61665486 - AluSx SINE Alu -1 311 2 463 130 9 157 chr17 23772994 23773054 -61665426 + ERVL-F LTR ERVL 4568 4635 -1129 923 242 118 36 chr17 23773055 23773419 -61665061 + ERVL-F LTR ERVL 5344 5737 -27 36 0 0 0 chr17 23773617 23773653 -61664827 + AT_rich Low_complexity Low_complexity 1 36 0 827 78 35 0 chr17 23773672 23773788 -61664692 - AluSq/x SINE Alu -192 120 1 1460 126 94 84 chr17 23774001 23774310 -61664170 - AluJo SINE Alu 0 312 1 206 32 32 0 chr17 23774413 23774444 -61664036 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 1543 207 99 39 chr17 23774475 23775052 -61663428 + MLT2F LTR ERVL 3 660 -3 1449 118 41 0 chr17 23775150 23775371 -61663109 + MER30 DNA MER1_type 1 230 0 633 207 25 0 chr17 23775390 23775511 -61662969 - FAM SINE Alu -39 146 23 967 120 0 0 chr17 23775599 23775732 -61662748 + AluSq/x SINE Alu 1 133 -179 713 192 13 13 chr17 23775832 23775983 -61662497 + L1M4 LINE L1 3545 3695 -2451 297 248 8 43 chr17 23776059 23776176 -61662304 + L1M4 LINE L1 4517 4629 -1517 * 354 250 22 59 chr17 23776174 23776310 -61662170 - L1ME3A LINE L1 -9 6161 6031 1982 157 7 7 chr17 23776368 23776668 -61661812 + AluJb SINE Alu 1 300 -12 660 70 0 0 chr17 23777183 23777269 -61661211 + L1PA11 LINE L1 6089 6174 0 278 342 32 26 chr17 23777602 23777757 -61660723 - MLT1K LTR MaLR -215 373 218 235 143 48 0 chr17 23778391 23778433 -61660047 - MLT1L LTR MaLR -350 265 222 307 301 159 6 chr17 23778500 23778676 -61659804 - MLT1K LTR MaLR -372 216 14 374 171 107 17 chr17 23778818 23778932 -61659548 - MIR3 SINE MIR -37 171 51 2392 143 25 25 chr17 23778959 23779366 -61659114 + MLT2D LTR ERVL 1 407 -7 233 375 71 0 chr17 23779812 23779924 -61658556 + LTR67 LTR ERVL 97 216 -341 2175 101 93 6 chr17 23779932 23780277 -61658203 - THE1C LTR MaLR 0 375 1 2339 218 32 2 chr17 23780396 23780831 -61657649 - ERVL LTR ERVL -851 4913 4466 516 256 31 26 chr17 23780833 23781024 -61657456 - L1M4 LINE L1 -995 5151 4960 1075 146 6 0 chr17 23781029 23781187 -61657293 - AluJb SINE Alu -16 296 138 306 292 99 25 chr17 23781256 23781417 -61657063 - L1M4 LINE L1 -1310 4836 4664 2018 129 0 39 chr17 23781438 23781749 -61656731 + AluJb SINE Alu 1 299 -13 264 143 0 0 chr17 23782001 23782056 -61656424 + Alu SINE Alu 1 41 -259 2033 147 0 0 chr17 23782056 23782342 -61656138 + AluSx SINE Alu 11 296 -16 2262 115 3 0 chr17 23782670 23782965 -61655515 + AluSx SINE Alu 1 296 -16 217 270 126 9 chr17 23782969 23783080 -61655400 - MER5A DNA MER1_type -63 126 3 25 0 0 0 chr17 23783398 23783423 -61655057 + AT_rich Low_complexity Low_complexity 1 25 0 2810 74 6 0 chr17 23783423 23783776 -61654704 - THE1A LTR MaLR 0 355 1 2070 134 7 0 chr17 23783776 23784074 -61654406 - AluSx SINE Alu -11 301 2 825 285 104 40 chr17 23784525 23785057 -61653423 - L2 LINE L2 -9 3304 2739 468 45 30 0 chr17 23785076 23785143 -61653337 - MER41B LTR ERV1 -86 549 481 249 237 54 75 chr17 23785178 23785271 -61653209 - L2 LINE L2 -615 2699 2609 339 328 0 32 chr17 23787290 23787415 -61651065 + MIR3 SINE MIR 49 169 -39 423 121 30 0 chr17 23787867 23787933 -61650547 + AluJ/FRAM SINE Alu 232 299 -13 24 0 0 0 chr17 23788057 23788081 -61650399 + AT_rich Low_complexity Low_complexity 1 24 0 418 266 28 73 chr17 23788277 23788454 -61650026 + MIR SINE MIR 91 259 -3 1957 154 6 6 chr17 23788901 23789255 -61649225 + AluJb SINE Alu 1 354 0 258 280 0 76 chr17 23790259 23790377 -61648103 - MIR SINE MIR -55 153 50 185 154 0 26 chr17 23791387 23791426 -61647054 + L2 LINE L2 3234 3271 -1 2111 112 16 19 chr17 23791611 23791924 -61646556 + AluSx SINE Alu 1 312 0 190 283 98 11 chr17 23792606 23792698 -61645782 - MER5B DNA MER1_type -75 103 4 2047 138 0 0 chr17 23792703 23793030 -61645450 + AluSq SINE Alu 1 327 0 257 258 107 44 chr17 23793593 23793752 -61644728 + L2 LINE L2 2882 3050 -222 246 173 115 0 chr17 23794656 23794708 -61643772 - MIR SINE MIR -65 143 86 349 173 27 27 chr17 23795094 23795169 -61643311 - LTR67 LTR ERVL -479 78 4 844 196 14 0 chr17 23796210 23796377 -61642103 - AluJb SINE Alu 0 308 140 241 278 56 0 chr17 23796449 23796521 -61641959 + MLT1L LTR MaLR 209 284 -331 1942 111 80 3 chr17 23796534 23796823 -61641657 - AluSq SINE Alu -2 311 1 774 238 142 40 chr17 23796911 23797214 -61641266 - MER2 DNA MER2_type -8 337 4 762 249 26 9 chr17 23797218 23797447 -61641033 - L1MC4a LINE L1 -1854 5954 5722 235 196 0 20 chr17 23797511 23797562 -61640918 + MIR SINE MIR 85 134 -128 2205 132 30 63 chr17 23798021 23798667 -61639813 - L1MB8 LINE L1 -6 6172 5514 1126 139 43 24 chr17 23798667 23798876 -61639604 - L1PA16 LINE L1 0 6166 5954 2205 132 30 63 chr17 23798876 23799123 -61639357 - L1MB8 LINE L1 -664 5514 5261 1138 184 0 10 chr17 23799221 23799422 -61639058 + AluSx SINE Alu 1 199 -113 610 56 0 0 chr17 23799422 23799494 -61638986 + AluSq/x SINE Alu 67 138 -174 20427 105 11 12 chr17 23799515 23802481 -61635999 + L1P LINE L1 11 2971 -3175 810 148 95 12 chr17 23802619 23802669 -61635811 + Tigger7 DNA MER2_type 2279 2323 -164 2099 105 46 26 chr17 23802669 23802975 -61635505 - AluSx SINE Alu 0 312 1 810 148 95 12 chr17 23802975 23803115 -61635365 + Tigger7 DNA MER2_type 2323 2487 0 318 267 57 80 chr17 23803231 23803407 -61635073 - MIR3 SINE MIR -4 204 33 2358 92 0 16 chr17 23803500 23803804 -61634676 - AluSg SINE Alu -11 299 1 192 298 0 18 chr17 23803947 23804004 -61634476 - L2 LINE L2 -3 3269 3214 1132 136 12 0 chr17 23804483 23804645 -61633835 - AluSx SINE Alu -148 164 1 25 51 0 0 chr17 23804645 23804684 -61633796 + AT_rich Low_complexity Low_complexity 1 39 0 749 162 0 0 chr17 23804685 23804802 -61633678 - FLAM_C SINE Alu -16 117 1 196 342 43 43 chr17 23804892 23805009 -61633471 - MIR SINE MIR -99 163 47 417 201 201 8 chr17 23805149 23805283 -61633197 - MIR SINE MIR -52 210 51 2152 109 0 0 chr17 23807209 23807485 -61630995 + AluSx SINE Alu 1 276 -36 189 175 0 0 chr17 23807507 23807547 -61630933 + GA-rich Low_complexity Low_complexity 1 40 0 266 0 29 0 chr17 23807645 23807679 -61630801 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 1854 125 10 56 chr17 23807681 23807984 -61630496 - AluSx SINE Alu -23 289 1 850 142 8 0 chr17 23807987 23808114 -61630366 - AluJb SINE Alu -19 293 166 189 0 0 0 chr17 23808454 23808475 -61630005 + (TTTTTA)n Simple_repeat Simple_repeat 4 24 0 646 47 0 0 chr17 23808481 23808566 -61629914 - SVA Other Other -3 1383 1299 388 220 64 50 chr17 23808723 23808864 -61629616 - HAL1 LINE L1 -1 2506 2364 2457 90 6 0 chr17 23808901 23809212 -61629268 + AluSp SINE Alu 1 313 0 1518 108 27 5 chr17 23809320 23809542 -61628938 + AluSg/x SINE Alu 69 295 -17 314 223 138 11 chr17 23809724 23809818 -61628662 - Zaphod DNA AcHobo -3824 207 102 2049 120 7 3 chr17 23810066 23810358 -61628122 - AluSx SINE Alu -19 293 1 21 57 0 0 chr17 23810361 23810396 -61628084 + AT_rich Low_complexity Low_complexity 1 35 0 306 73 0 0 chr17 23810624 23810665 -61627815 + (CA)n Simple_repeat Simple_repeat 2 42 0 1098 158 6 0 chr17 23810900 23811071 -61627409 - AluSg/x SINE Alu -7 305 134 1757 115 0 0 chr17 23811071 23811305 -61627175 - AluSq SINE Alu -10 303 70 1702 164 42 7 chr17 23812086 23812372 -61626108 - AluJb SINE Alu -16 296 1 410 41 0 0 chr17 23813700 23813749 -61624731 + MADE1 DNA Mariner 31 79 -1 2188 125 0 13 chr17 23814286 23814589 -61623891 - AluSx SINE Alu -13 299 1 21 36 0 0 chr17 23814887 23814915 -61623565 + AT_rich Low_complexity Low_complexity 1 28 0 22 56 0 0 chr17 23814973 23815009 -61623471 + AT_rich Low_complexity Low_complexity 1 36 0 978 203 0 0 chr17 23815021 23815203 -61623277 + AluJo SINE Alu 123 304 -8 367 302 31 19 chr17 23815203 23815362 -61623118 + L1M4 LINE L1 4461 4621 -1525 1006 258 64 20 chr17 23815534 23815926 -61622554 - LTR16A LTR ERVL -26 424 16 758 161 0 31 chr17 23816093 23816223 -61622257 - FLAM_C SINE Alu -16 127 2 204 135 27 81 chr17 23816307 23816381 -61622099 + T-rich Low_complexity Low_complexity 5 74 0 23 0 0 0 chr17 23816743 23816766 -61621714 + AT_rich Low_complexity Low_complexity 1 23 0 2219 112 0 0 chr17 23816988 23817307 -61621173 - AluSx SINE Alu 0 319 1 26 0 0 0 chr17 23817690 23817716 -61620764 + AT_rich Low_complexity Low_complexity 1 26 0 1130 174 0 19 chr17 23817854 23818067 -61620413 - MER3 DNA MER1_type 0 209 1 1700 152 4 4 chr17 23818088 23818351 -61620129 + AluSx SINE Alu 45 307 -5 545 279 75 15 chr17 23818815 23819016 -61619464 + MLT1L LTR MaLR 403 615 0 277 248 0 0 chr17 23819507 23819575 -61618905 - L1MD2 LINE L1 -83 6274 6092 249 220 0 0 chr17 23819581 23819631 -61618849 - L1MD2 LINE L1 -242 6117 6068 732 173 7 0 chr17 23819632 23819771 -61618709 + L1 LINE L1 4453 4592 -1554 1347 102 0 0 chr17 23819792 23819969 -61618511 - AluSg/x SINE Alu -16 296 120 5400 72 0 0 chr17 23819969 23820639 -61617841 - L1PA6 LINE L1 -3 6151 5482 18118 56 6 0 chr17 23819972 23823020 -61615460 - L1PA6 LINE L1 -6 6148 3089 1144 93 7 7 chr17 23823123 23823274 -61615206 - AluSq/x SINE Alu -162 151 1 1425 82 115 10 chr17 23823441 23823649 -61614831 - MER30 DNA MER1_type 0 230 1 1815 158 28 3 chr17 23824033 23824324 -61614156 + AluSx SINE Alu 1 298 -14 2246 96 6 13 chr17 23825490 23825802 -61612678 + AluSg SINE Alu 1 310 0 1887 152 0 4 chr17 23825886 23826163 -61612317 - AluSx SINE Alu -36 276 1 21 0 0 0 chr17 23827000 23827021 -61611459 + AT_rich Low_complexity Low_complexity 1 21 0 1890 101 0 35 chr17 23827400 23827658 -61610822 - AluSx SINE Alu -15 297 49 1830 112 35 54 chr17 23828508 23828822 -61609658 + AluSx SINE Alu 1 308 -4 1675 181 0 20 chr17 23829308 23829612 -61608868 + AluJo SINE Alu 5 302 -10 2252 103 7 0 chr17 23830575 23830866 -61607614 + AluSc SINE Alu 1 293 -16 198 143 0 0 chr17 23832484 23832519 -61605961 + (GAAA)n Simple_repeat Simple_repeat 3 37 0 235 196 39 0 chr17 23833572 23833623 -61604857 + MER58 DNA MER1_type 2358 2410 -10 1872 136 7 14 chr17 23833624 23833910 -61604570 + AluSx SINE Alu 1 284 -28 1762 160 0 42 chr17 23834301 23834607 -61603873 - AluJb SINE Alu -5 307 15 200 86 29 0 chr17 23835983 23836018 -61602462 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 201 39 0 0 chr17 23836285 23836311 -61602169 + (CAA)n Simple_repeat Simple_repeat 2 27 0 956 74 0 8 chr17 23836313 23836435 -61602045 + AluSq/x SINE Alu 1 121 -192 2230 118 0 0 chr17 23836605 23836909 -61601571 - AluSx SINE Alu -8 304 1 251 206 15 29 chr17 23837779 23837847 -61600633 - L3 LINE CR1 -3 1574 1508 2019 119 36 16 chr17 23837864 23838167 -61600313 + AluSx SINE Alu 1 309 -3 960 171 11 45 chr17 23838174 23838350 -61600130 + AluSg/x SINE Alu 133 302 -8 310 250 0 0 chr17 23838908 23838968 -61599512 + L2 LINE L2 3209 3268 -4 717 275 142 19 chr17 23839142 23839516 -61598964 - L3 LINE CR1 -206 1371 952 1780 163 3 3 chr17 23839516 23839798 -61598682 - AluJb SINE Alu -19 293 12 1075 152 101 135 chr17 23839996 23840160 -61598320 - AluJo SINE Alu -15 287 136 2287 72 7 42 chr17 23840160 23840466 -61598014 - AluSg SINE Alu -14 296 2 1075 152 101 135 chr17 23840466 23840597 -61597883 - AluJo SINE Alu -166 136 2 2302 80 0 52 chr17 23840887 23841211 -61597269 - AluSx SINE Alu -5 307 1 1387 185 49 4 chr17 23841298 23841563 -61596917 + AluJo SINE Alu 18 294 -18 2175 113 0 10 chr17 23841568 23841877 -61596603 + AluSx SINE Alu 1 306 -6 201 138 0 0 chr17 23842780 23842809 -61595671 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 2121 71 19 0 chr17 23842906 23843173 -61595307 + AluSp SINE Alu 3 274 -39 461 149 11 21 chr17 23843279 23843373 -61595107 + AluSp/q SINE Alu 216 308 -5 2269 87 13 10 chr17 23845965 23846274 -61592206 - AluSx SINE Alu -2 310 1 208 135 0 0 chr17 23846396 23846433 -61592047 + (T)n Simple_repeat Simple_repeat 1 37 0 2397 90 13 0 chr17 23846752 23847053 -61591427 - AluSx SINE Alu -7 305 1 327 179 2 0 chr17 23847451 23847518 -61590962 - Alu SINE Alu 0 301 244 356 313 138 45 chr17 23847747 23847897 -61590583 + L2 LINE L2 2113 2248 -1066 2240 124 0 0 chr17 23847897 23848195 -61590285 - AluSx SINE Alu -14 298 1 356 313 138 45 chr17 23848195 23848492 -61589988 + L2 LINE L2 2248 2602 -712 235 200 31 15 chr17 23848500 23848565 -61589915 - L1ME4a LINE L1 -80 6041 5976 498 230 196 0 chr17 23848592 23848740 -61589740 + MIR SINE MIR 86 262 0 1770 187 0 16 chr17 23848863 23849173 -61589307 + AluJb SINE Alu 1 305 -7 1847 114 70 92 chr17 23849376 23849509 -61588971 + MER46B DNA MER2_type 1 135 -2596 1224 193 60 14 chr17 23849509 23849794 -61588686 + AluSx SINE Alu 1 298 -14 1847 114 70 92 chr17 23849794 23849849 -61588631 + MER46B DNA MER2_type 135 56 -2675 2168 95 32 0 chr17 23849849 23850133 -61588347 + AluSg SINE Alu 1 293 -17 1847 114 70 92 chr17 23850133 23850312 -61588168 + MER46B DNA MER2_type 55 236 0 907 122 32 0 chr17 23850627 23850750 -61587730 + AluSq/x SINE Alu 9 135 -177 2051 138 0 7 chr17 23850750 23851048 -61587432 + AluSx SINE Alu 1 296 -16 1977 123 58 3 chr17 23851443 23851735 -61586745 + AluSg SINE Alu 2 309 -1 2200 133 0 3 chr17 23851920 23852229 -61586251 + AluSx SINE Alu 1 308 -4 1226 199 7 29 chr17 23853201 23853477 -61585003 - AluJo SINE Alu -42 270 1 435 276 8 0 chr17 23853477 23853611 -61584869 - L1M4 LINE L1 -3198 2948 2814 231 36 0 0 chr17 23853641 23853669 -61584811 + (TA)n Simple_repeat Simple_repeat 2 29 0 1943 127 3 17 chr17 23853669 23853822 -61584658 - AluSx SINE Alu -25 287 138 2347 85 0 0 chr17 23853822 23854117 -61584363 - AluSc SINE Alu -14 295 1 1943 127 3 17 chr17 23854117 23854254 -61584226 - AluSx SINE Alu -174 138 1 1951 128 0 20 chr17 23854328 23854625 -61583855 + AluSx SINE Alu 1 291 -21 183 42 0 0 chr17 23854736 23854760 -61583720 + (CCA)n Simple_repeat Simple_repeat 1 24 0 1632 178 89 7 chr17 23854763 23855067 -61583413 + MLT1A1 LTR MaLR 37 365 0 1675 176 24 3 chr17 23855096 23855386 -61583094 - AluJo SINE Alu -16 296 1 1013 156 11 34 chr17 23856617 23856796 -61581684 + AluJ SINE Alu 1 175 -137 2041 194 61 25 chr17 23856797 23857240 -61581240 - LTR2B LTR ERV1 0 490 32 782 158 8 0 chr17 23857255 23857382 -61581098 + AluJ SINE Alu 169 296 -16 316 77 0 0 chr17 23857510 23857562 -61580918 - L1MA1 LINE L1 -1 6301 6250 1968 166 0 6 chr17 23858000 23858313 -61580167 - AluJb SINE Alu -1 311 1 1034 206 55 0 chr17 23858863 23859081 -61579399 - MIR SINE MIR -4 258 29 1864 175 0 3 chr17 23859094 23859403 -61579077 + AluJb SINE Alu 1 308 -4 262 256 35 12 chr17 23859403 23859489 -61578991 + MIR SINE MIR 45 132 -130 223 175 0 0 chr17 23860155 23860195 -61578285 + (TTCA)n Simple_repeat Simple_repeat 4 43 0 286 285 154 39 chr17 23860197 23860327 -61578153 - L2 LINE L2 0 3272 3128 476 183 146 7 chr17 23860444 23860581 -61577899 + MIR SINE MIR 43 198 -64 2243 112 10 0 chr17 23861840 23862135 -61576345 + AluSx SINE Alu 1 298 -14 335 222 22 0 chr17 23862162 23862252 -61576228 - MER113 DNA MER1_type? -429 92 1 765 220 30 30 chr17 23862818 23863018 -61575462 - MIR SINE MIR -55 207 8 2176 128 3 3 chr17 23863271 23863577 -61574903 + AluSx SINE Alu 1 306 -6 1740 153 3 29 chr17 23864447 23864754 -61573726 + AluJb SINE Alu 1 299 -13 2263 109 3 0 chr17 23864762 23865064 -61573416 + AluSg SINE Alu 5 307 -3 330 171 0 0 chr17 23866017 23866087 -61572393 + (TA)n Simple_repeat Simple_repeat 1 70 0 2332 97 3 0 chr17 23866130 23866429 -61572051 - AluSp SINE Alu -13 300 1 3213 111 73 52 chr17 23866449 23866604 -61571876 - MER4B LTR ERV1 0 610 460 2388 112 0 0 chr17 23866604 23866917 -61571563 - AluSp SINE Alu 0 313 1 3213 111 73 52 chr17 23866917 23867319 -61571161 - MER4B LTR ERV1 -150 460 41 1919 148 0 0 chr17 23867865 23868143 -61570337 + AluSx SINE Alu 35 312 0 1956 140 3 10 chr17 23869771 23870085 -61568395 - AluJo SINE Alu 0 312 1 1940 131 7 3 chr17 23870351 23870655 -61567825 - AluSx SINE Alu 0 305 1 26 30 0 0 chr17 23870926 23870959 -61567521 + AT_rich Low_complexity Low_complexity 1 33 0 879 158 0 0 chr17 23870959 23871086 -61567394 - FLAM_C SINE Alu -16 127 1 219 88 0 0 chr17 23871090 23871124 -61567356 + (TTTTC)n Simple_repeat Simple_repeat 2 35 0 610 23 0 3 chr17 23871120 23871203 -61567277 - L1PA3 LINE L1 0 6155 6079 475 270 56 43 chr17 23871209 23871442 -61567038 - L1ME LINE L1 -512 5609 5374 1787 139 0 96 chr17 23871608 23871864 -61566616 - AluJo SINE Alu -1 311 95 2090 136 7 3 chr17 23871864 23872166 -61566314 - AluSx SINE Alu -9 303 1 1787 139 0 96 chr17 23872166 23872253 -61566227 - AluJo SINE Alu -217 95 1 298 220 92 28 chr17 23872444 23872553 -61565927 - LTR33 LTR ERVL -52 469 354 501 277 71 34 chr17 23872593 23872831 -61565649 - LTR33 LTR ERVL -274 247 1 1806 151 11 0 chr17 23872990 23873295 -61565185 + AluJo SINE Alu 1 308 0 1763 177 37 0 chr17 23874226 23874526 -61563954 + AluSx SINE Alu 1 311 -1 663 138 11 0 chr17 23874754 23874848 -61563632 + AluSq/x SINE Alu 33 127 -185 723 148 87 46 chr17 23874958 23875154 -61563326 - LTR36 LTR ERV1 -407 204 1 521 267 47 37 chr17 23875309 23875500 -61562980 + MIR SINE MIR 66 258 -4 253 328 35 52 chr17 23875555 23875671 -61562809 + MIR SINE MIR 117 230 -32 268 297 36 103 chr17 23875747 23875942 -61562538 + MIR3 SINE MIR 13 194 -14 522 177 7 14 chr17 23875966 23876093 -61562387 + (CA)n Simple_repeat Simple_repeat 2 129 -12 3172 146 155 29 chr17 23876093 23876595 -61561885 - LTR8A LTR ERV1 0 727 124 1730 157 14 7 chr17 23876595 23876919 -61561561 + AluSx SINE Alu 1 326 0 3172 146 155 29 chr17 23876919 23877061 -61561419 - LTR8A LTR ERV1 -603 124 1 522 177 7 14 chr17 23877061 23877074 -61561406 + (CA)n Simple_repeat Simple_repeat 129 141 0 1732 151 56 0 chr17 23877761 23878046 -61560434 - AluSx SINE Alu -11 301 1 373 212 8 85 chr17 23878575 23878618 -61559862 - MIR SINE MIR -59 203 158 2498 78 3 0 chr17 23878618 23878924 -61559556 - AluSp SINE Alu -1 312 6 373 212 8 85 chr17 23878924 23878998 -61559482 - MIR SINE MIR -104 158 95 240 111 0 0 chr17 23879087 23879123 -61559357 + (TCCC)n Simple_repeat Simple_repeat 3 38 0 468 165 220 9 chr17 23879123 23879232 -61559248 - FLAM_C SINE Alu -1 132 1 1190 183 0 25 chr17 23879878 23880080 -61558400 + AluJo SINE Alu 86 282 -30 337 231 111 9 chr17 23880644 23880752 -61557728 + LTR67 LTR ERVL 428 546 -11 1546 163 13 59 chr17 23880754 23881061 -61557419 + AluJo SINE Alu 1 293 -19 192 232 188 43 chr17 23881135 23881204 -61557276 - L2 LINE L2 -12 3260 3182 679 213 65 24 chr17 23881347 23881485 -61556995 + L2 LINE L2 2639 2787 -527 2878 169 18 84 chr17 23881485 23882112 -61556368 - LTR9 LTR ERV1 0 612 28 2136 93 66 0 chr17 23882112 23882401 -61556079 - AluSc SINE Alu -1 308 1 2878 169 18 84 chr17 23882401 23882428 -61556052 - LTR9 LTR ERV1 -584 28 1 679 213 65 24 chr17 23882428 23882458 -61556022 + L2 LINE L2 2787 2814 -500 274 215 43 21 chr17 23882461 23882554 -61555926 + MLT1J LTR MaLR 100 194 -317 1829 165 28 0 chr17 23883159 23883444 -61555036 + AluJb SINE Alu 1 293 -19 2298 87 0 14 chr17 23883553 23883889 -61554591 + AluSx SINE Alu 1 332 0 422 321 87 35 chr17 23883897 23884461 -61554019 + L1ME3A LINE L1 4614 5206 -940 578 244 63 25 chr17 23884505 23884743 -61553737 + L1ME3A LINE L1 5313 5562 -600 230 221 39 26 chr17 23884749 23884826 -61553654 + MER46C DNA MER2_type 10 87 -251 461 17 17 0 chr17 23884826 23884884 -61553596 + (TATG)n Simple_repeat Simple_repeat 2 60 0 1866 101 67 0 chr17 23884884 23885152 -61553328 - AluSx SINE Alu -26 286 1 231 256 26 0 chr17 23885184 23885262 -61553218 + (CGG)n Simple_repeat Simple_repeat 2 81 0 619 229 32 6 chr17 23885780 23886049 -61552431 + MER52A LTR ERV1 149 597 -681 510 281 133 12 chr17 23886067 23886149 -61552331 + L1ME3A LINE L1 5565 5636 -534 1974 138 3 14 chr17 23886149 23886446 -61552034 + AluJb SINE Alu 1 294 -18 510 281 133 12 chr17 23886446 23886687 -61551793 + L1ME3A LINE L1 5636 5927 -243 1273 152 0 0 chr17 23886721 23886899 -61551581 + AluSx SINE Alu 24 201 -111 240 235 20 31 chr17 23886916 23887014 -61551466 + (TA)n Simple_repeat Simple_repeat 2 98 0 237 241 36 12 chr17 23887124 23887207 -61551273 + L1MC4 LINE L1 7918 8002 -40 225 0 0 0 chr17 23887213 23887238 -61551242 + (TTATA)n Simple_repeat Simple_repeat 4 28 0 2032 129 0 27 chr17 23887238 23887532 -61550948 - AluSx SINE Alu -26 286 1 782 196 79 8 chr17 23887532 23887751 -61550729 + MSTC LTR MaLR 168 428 0 854 123 14 14 chr17 23887751 23887897 -61550583 - L1M3 LINE L1 -593 5578 5433 969 182 30 10 chr17 23888770 23889058 -61549422 - L1M3 LINE L1 -742 5441 5155 191 313 0 83 chr17 23889058 23889154 -61549326 - L2 LINE L2 -266 3006 2919 221 234 31 47 chr17 23889298 23889362 -61549118 + MER5A DNA MER1_type 12 74 -115 770 150 0 0 chr17 23889374 23889487 -61548993 + FLAM_C SINE Alu 13 125 -18 416 289 8 8 chr17 23889497 23889618 -61548862 + MER5A DNA MER1_type 61 181 -8 252 306 0 14 chr17 23890825 23890897 -61547583 + MIR SINE MIR 191 261 -1 479 261 109 7 chr17 23890906 23891044 -61547436 + MIR SINE MIR 95 246 -16 1517 195 0 43 chr17 23891089 23891412 -61547068 - AluJb SINE Alu -3 309 1 373 200 7 89 chr17 23891429 23891564 -61546916 - L1MA8 LINE L1 0 6291 6168 357 230 14 14 chr17 23891571 23891645 -61546835 + L2 LINE L2 3180 3253 -19 579 66 0 0 chr17 23891645 23891721 -61546759 + (GGAA)n Simple_repeat Simple_repeat 1 76 0 1252 130 0 21 chr17 23892111 23892303 -61546177 - AluSg/x SINE Alu -5 305 118 589 141 0 0 chr17 23892434 23892526 -61545954 - FLAM_C SINE Alu -24 119 28 456 308 73 13 chr17 23892526 23892760 -61545720 + L2 LINE L2 2885 3132 -181 2305 121 0 0 chr17 23892856 23893163 -61545317 - AluSg SINE Alu -3 307 1 411 289 60 118 chr17 23893410 23893759 -61544721 + L2 LINE L2 2944 3272 0 1986 162 0 3 chr17 23893760 23894069 -61544411 + AluJb SINE Alu 1 308 -4 1705 235 60 72 chr17 23894345 23894581 -61543899 - L1ME3A LINE L1 -23 6147 5910 2217 106 0 41 chr17 23894581 23894901 -61543579 - AluSx SINE Alu -5 307 1 1686 162 67 3 chr17 23894904 23895188 -61543292 - AluJo SINE Alu -10 302 1 1705 235 60 72 chr17 23895188 23895610 -61542870 - L1ME3A LINE L1 -262 5908 5493 1807 167 3 23 chr17 23895793 23896098 -61542382 - AluJo SINE Alu -9 303 5 1308 204 0 22 chr17 23896347 23896661 -61541819 + L1M4 LINE L1 4984 5290 -856 416 100 11 144 chr17 23896661 23896751 -61541729 + MADE1 DNA Mariner 2 79 -1 523 195 62 9 chr17 23896798 23896911 -61541569 + MLT1C LTR MaLR 349 467 0 282 87 0 0 chr17 23896962 23897008 -61541472 + (TG)n Simple_repeat Simple_repeat 2 47 0 1854 137 56 3 chr17 23897113 23897398 -61541082 + AluJo SINE Alu 2 301 -11 317 301 147 47 chr17 23897831 23898233 -61540247 + L2 LINE L2 2815 3256 -16 2022 144 3 0 chr17 23898251 23898556 -61539924 - AluJb SINE Alu -6 306 1 329 260 202 0 chr17 23898727 23898831 -61539649 - L2 LINE L2 0 3272 3148 742 279 75 47 chr17 23898883 23899285 -61539195 - MLT1K LTR MaLR 0 588 176 243 0 45 45 chr17 23899437 23899481 -61538999 + (TTTTA)n Simple_repeat Simple_repeat 2 45 0 1259 50 0 13 chr17 23899481 23899640 -61538840 - L1PA4 LINE L1 -11 6144 5988 370 284 50 14 chr17 23899643 23899784 -61538696 - MIR3 SINE MIR -60 148 3 1940 156 16 10 chr17 23899852 23900159 -61538321 - AluSx SINE Alu -2 310 2 684 36 0 0 chr17 23900781 23900864 -61537616 + (TTTC)n Simple_repeat Simple_repeat 2 84 0 1713 144 0 0 chr17 23900866 23901109 -61537371 - AluJb SINE Alu -28 284 42 808 184 41 10 chr17 23901148 23901344 -61537136 + MLT1C LTR MaLR 1 202 -265 1080 230 26 15 chr17 23901429 23901694 -61536786 + MLT1C LTR MaLR 200 467 0 2173 140 0 0 chr17 23901785 23902093 -61536387 - AluSx SINE Alu -4 308 1 2032 166 0 0 chr17 23902096 23902397 -61536083 - AluJb SINE Alu -11 301 1 447 323 105 4 chr17 23902514 23902743 -61535737 + L3 LINE CR1 1231 1482 -95 260 304 0 0 chr17 23902787 23902843 -61535637 - MIR SINE MIR -190 72 17 181 287 0 64 chr17 23902848 23902942 -61535538 + MIR3 SINE MIR 118 205 -3 607 227 0 0 chr17 23903199 23903309 -61535171 + MER81 DNA DNA 5 114 0 477 309 82 66 chr17 23904052 23904268 -61534212 + L2 LINE L2 2813 3024 -248 2077 127 148 13 chr17 23904268 23904645 -61533835 - MSTA LTR MaLR 0 428 1 477 309 82 66 chr17 23904645 23904881 -61533599 + L2 LINE L2 3024 3272 0 362 218 208 0 chr17 23905521 23905622 -61532858 - L1MDa LINE L1 -4089 1991 1870 1334 149 7 117 chr17 23905625 23905907 -61532573 + AluJb SINE Alu 37 287 -25 2294 104 10 0 chr17 23906059 23906358 -61532122 - AluSp SINE Alu -5 308 7 689 173 8 31 chr17 23906364 23906491 -61531989 - FLAM_C SINE Alu -8 125 2 1387 149 0 0 chr17 23906577 23906772 -61531708 - AluJb SINE Alu 0 312 118 885 254 67 40 chr17 23906774 23907179 -61531301 - L1MDa LINE L1 -4517 1744 1329 357 24 0 0 chr17 23907181 23907223 -61531257 + (TTTC)n Simple_repeat Simple_repeat 2 43 0 1651 112 5 0 chr17 23907252 23907466 -61531014 - AluSx SINE Alu -97 215 1 1147 159 0 0 chr17 23907487 23907663 -61530817 - AluSg/x SINE Alu 0 312 137 727 154 0 60 chr17 23907738 23907887 -61530593 - FLAM_C SINE Alu -1 142 3 741 188 14 158 chr17 23907901 23908363 -61530117 - L1MDa LINE L1 -4879 1201 813 1574 120 0 0 chr17 23908363 23908571 -61529909 + AluSg/x SINE Alu 85 292 -20 741 188 14 158 chr17 23908571 23908603 -61529877 - L1MDa LINE L1 -5267 813 778 1348 211 56 83 chr17 23908618 23908675 -61529805 - L1M4 LINE L1 -978 5168 5111 1846 164 4 4 chr17 23908675 23908976 -61529504 - AluSx SINE Alu 0 301 1 1348 211 56 83 chr17 23908976 23909055 -61529425 - L1M4 LINE L1 -1035 5111 5031 2308 120 48 31 chr17 23909055 23909413 -61529067 + THE1B LTR MaLR 1 364 0 11827 89 17 3 chr17 23909413 23910971 -61527509 + THE1B-int LTR MaLR 1 1580 0 2058 124 75 29 chr17 23910971 23911319 -61527161 + THE1B LTR MaLR 1 364 0 1348 211 56 83 chr17 23911319 23911657 -61526823 - L1M4 LINE L1 -1112 5034 4703 762 249 31 0 chr17 23911670 23911895 -61526585 - L1MDa LINE L1 -2629 3451 3220 3101 176 30 66 chr17 23911896 23912257 -61526223 + MER44D DNA MER2_type 1 373 -2214 3981 115 37 94 chr17 23912257 23912309 -61526171 + LTR8 LTR ERV1 1 54 -637 2172 129 0 0 chr17 23912309 23912604 -61525876 + AluSx SINE Alu 1 295 -17 3981 115 37 94 chr17 23912604 23913042 -61525438 + LTR8 LTR ERV1 54 438 -253 1978 166 0 3 chr17 23913042 23913350 -61525130 - AluJb SINE Alu -5 307 1 3981 115 37 94 chr17 23913350 23913591 -61524889 + LTR8 LTR ERV1 438 691 0 3101 176 30 66 chr17 23913591 23913960 -61524520 + MER44D DNA MER2_type 373 705 0 1672 231 26 0 chr17 23913960 23914285 -61524195 - L1MDa LINE L1 -2860 3220 2876 1823 163 3 19 chr17 23914285 23914598 -61523882 - AluJo SINE Alu -4 308 1 1672 231 26 0 chr17 23914598 23914765 -61523715 - L1MDa LINE L1 -3204 2876 2715 1564 242 82 50 chr17 23914776 23915358 -61523122 - L1MDa LINE L1 -5441 629 29 241 299 39 0 chr17 23915382 23915459 -61523021 - MIR SINE MIR -136 126 47 741 278 99 9 chr17 23915645 23915868 -61522612 + MIR SINE MIR 8 250 -12 190 258 211 31 chr17 23916033 23916161 -61522319 - MIR3 SINE MIR -18 190 40 356 274 20 0 chr17 23916749 23916851 -61521629 - MIR SINE MIR -101 161 58 279 275 184 0 chr17 23917007 23917116 -61521364 - L2 LINE L2 0 3272 3144 1677 171 10 17 chr17 23917728 23918026 -61520454 + AluJb SINE Alu 1 296 -16 647 225 39 16 chr17 23918227 23918421 -61520059 - MIR SINE MIR -28 234 34 190 318 48 0 chr17 23919286 23919349 -61519131 - MIR SINE MIR -3 259 194 2531 83 3 0 chr17 23919396 23919708 -61518772 - AluSp SINE Alu 0 313 1 2007 161 0 13 chr17 23919708 23920019 -61518461 - AluSx SINE Alu -5 307 1 234 150 0 0 chr17 23920077 23920117 -61518363 + (CAT)n Simple_repeat Simple_repeat 2 41 0 532 289 27 7 chr17 23920133 23920282 -61518198 - MIR SINE MIR -32 230 79 244 316 11 32 chr17 23920904 23920999 -61517481 + MIR3 SINE MIR 81 173 -35 324 272 25 0 chr17 23921281 23921362 -61517118 - MLT1K LTR MaLR -8 580 498 295 313 82 8 chr17 23921486 23921620 -61516860 + MLT1J LTR MaLR 156 299 -212 565 280 79 77 chr17 23921782 23922091 -61516389 - MLT1K LTR MaLR -201 387 10 208 164 213 0 chr17 23923142 23923203 -61515277 + MIR SINE MIR 16 89 -173 1799 164 11 4 chr17 23923212 23923517 -61514963 - AluJo SINE Alu 0 307 1 34 0 0 0 chr17 23923529 23923563 -61514917 + AT_rich Low_complexity Low_complexity 1 34 0 2180 127 0 32 chr17 23923576 23923891 -61514589 - AluSx SINE Alu -7 305 1 1557 171 18 55 chr17 23923909 23924028 -61514452 + L1MB8 LINE L1 5812 5934 -244 2576 75 0 0 chr17 23924028 23924336 -61514144 + AluY SINE Alu 1 308 -3 1557 171 18 55 chr17 23924336 23924597 -61513883 + L1MB8 LINE L1 5934 6178 0 281 245 49 29 chr17 23925097 23925199 -61513281 + MIR SINE MIR 42 145 -63 203 105 53 0 chr17 23925401 23925439 -61513041 + CT-rich Low_complexity Low_complexity 1 40 0 2121 160 0 0 chr17 23925439 23925746 -61512734 - AluSx SINE Alu -5 307 1 250 344 39 0 chr17 23925753 23925881 -61512599 - L3 LINE CR1 -162 1415 1283 21 0 0 0 chr17 23927297 23927318 -61511162 + AT_rich Low_complexity Low_complexity 1 21 0 837 282 155 7 chr17 23927762 23928172 -61510308 - L2 LINE L2 -48 3265 2791 857 145 14 29 chr17 23928290 23928428 -61510052 - AluJo SINE Alu -176 136 1 946 180 30 54 chr17 23928448 23928700 -61509780 - L1ME2 LINE L1 -14 6148 5875 6740 131 38 11 chr17 23928733 23931025 -61507455 - L1MA3 LINE L1 0 7724 5367 631 115 35 26 chr17 23931019 23931132 -61507348 - L1MA3 LINE L1 -7436 129 16 * 392 236 9 19 chr17 23931131 23931237 -61507243 - L1ME2 LINE L1 -271 5895 5791 * 1438 210 39 45 chr17 23931241 23931762 -61506718 - L1ME2 LINE L1 -662 5502 4981 1661 173 35 11 chr17 23931762 23932046 -61506434 + AluJo SINE Alu 1 291 -21 1438 210 39 45 chr17 23932046 23932106 -61506374 - L1ME2 LINE L1 -1183 4981 4922 1322 167 103 55 chr17 23932507 23932855 -61505625 + MLT1A1 LTR MaLR 1 365 0 326 307 43 14 chr17 23933037 23933177 -61505303 - MIR SINE MIR -63 199 56 297 320 72 20 chr17 23933738 23933891 -61504589 + L2 LINE L2 3111 3271 -1 1988 114 60 20 chr17 23933891 23934190 -61504290 + AluSp SINE Alu 1 311 -2 541 237 25 0 chr17 23934304 23934441 -61504039 + MIR SINE MIR 115 252 -10 311 279 36 57 chr17 23934902 23935042 -61503438 - L1ME LINE L1 -386 5735 5599 303 313 45 0 chr17 23935206 23935318 -61503162 + MLT1K LTR MaLR 132 248 -340 22 0 0 0 chr17 23935329 23935351 -61503129 + AT_rich Low_complexity Low_complexity 1 22 0 767 208 61 15 chr17 23935395 23935592 -61502888 - L1MC4 LINE L1 -143 7899 7694 594 190 58 29 chr17 23935609 23935746 -61502734 - AluJo SINE Alu -66 246 106 1490 235 59 8 chr17 23935747 23936130 -61502350 - L1MC4 LINE L1 -380 7662 7300 2049 145 7 0 chr17 23936130 23936427 -61502053 - AluJb SINE Alu -13 299 1 1490 235 59 8 chr17 23936427 23936772 -61501708 - L1MC4 LINE L1 -742 7300 6751 207 0 0 0 chr17 23936779 23936802 -61501678 + (TAAAAA)n Simple_repeat Simple_repeat 2 24 0 557 324 111 20 chr17 23936898 23937204 -61501276 + MLT1K LTR MaLR 255 588 0 1555 161 24 24 chr17 23937637 23937892 -61500588 + AluJo SINE Alu 1 255 -57 297 179 21 11 chr17 23938146 23938241 -61500239 + (CA)n Simple_repeat Simple_repeat 2 97 0 1866 178 0 0 chr17 23938313 23938650 -61499830 - AluJo SINE Alu 0 337 1 565 178 8 11 chr17 23938711 23938953 -61499527 + AluJ SINE Alu 1 312 0 1975 157 3 16 chr17 23939228 23939540 -61498940 - AluJb SINE Alu -4 308 1 269 238 12 25 chr17 23939809 23939889 -61498591 - MIR SINE MIR -167 95 17 1733 53 0 9 chr17 23940398 23940626 -61497854 + L1PA8 LINE L1 5947 6172 0 245 291 145 8 chr17 23940635 23940752 -61497728 + MIR SINE MIR 54 186 -76 191 286 0 20 chr17 23940863 23940912 -61497568 + L2 LINE L2 3211 3258 -14 2421 98 25 19 chr17 23941155 23941521 -61496959 - THE1C LTR MaLR 0 375 8 475 279 75 78 chr17 23941652 23941690 -61496790 - MLT1K LTR MaLR -40 548 511 2100 143 7 0 chr17 23941690 23941983 -61496497 + AluSx SINE Alu 1 295 -17 475 279 75 78 chr17 23941983 23942266 -61496214 - MLT1K LTR MaLR -77 511 228 2048 115 3 94 chr17 23942268 23942607 -61495873 - AluSx SINE Alu -4 308 1 1770 163 0 14 chr17 23942648 23942931 -61495549 + AluJo SINE Alu 14 292 -20 22 0 0 0 chr17 23942931 23942953 -61495527 + AT_rich Low_complexity Low_complexity 1 22 0 455 311 30 16 chr17 23943177 23943368 -61495112 + MIR SINE MIR 5 196 -62 382 132 26 0 chr17 23943735 23943811 -61494669 + CT-rich Low_complexity Low_complexity 4 81 0 569 325 65 56 chr17 23943831 23944333 -61494147 - L2 LINE L2 -13 3259 2754 329 269 119 8 chr17 23944841 23944975 -61493505 - L3 LINE CR1 -3 1574 1426 649 273 102 72 chr17 23945632 23946006 -61492474 - L2 LINE L2 -1 3271 2887 1237 137 0 11 chr17 23946417 23946600 -61491880 - AluSg/x SINE Alu -16 294 114 * 1347 148 51 34 chr17 23946599 23946836 -61491644 - AluSx SINE Alu -71 241 1 814 141 0 15 chr17 23946843 23946978 -61491502 - FLAM_C SINE Alu 0 133 1 225 123 298 0 chr17 23946982 23947039 -61491441 - L1M3 LINE L1 -508 5672 5599 716 187 80 0 chr17 23947039 23947189 -61491291 - AluJo/FRAM SINE Alu -16 296 135 704 109 0 0 chr17 23947179 23947280 -61491200 + AluSp/q SINE Alu 163 263 -50 * 1668 192 20 13 chr17 23947280 23947676 -61490804 + L1MB4 LINE L1 5681 6079 -101 22 0 0 0 chr17 23947724 23947746 -61490734 + AT_rich Low_complexity Low_complexity 1 22 0 1875 146 15 0 chr17 23948347 23948621 -61489859 + AluSx SINE Alu 1 278 -34 243 0 0 0 chr17 23948625 23948652 -61489828 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1902 131 45 0 chr17 23948656 23948947 -61489533 + AluSg SINE Alu 1 303 0 21 36 0 0 chr17 23949046 23949074 -61489406 + AT_rich Low_complexity Low_complexity 1 28 0 279 0 0 0 chr17 23949263 23949294 -61489186 + (CA)n Simple_repeat Simple_repeat 2 32 0 204 219 248 66 chr17 23949367 23949504 -61488976 - MIR SINE MIR -57 205 44 475 196 116 9 chr17 23950603 23950715 -61487765 - FLAM_C SINE Alu -7 126 3 229 250 77 125 chr17 23950715 23950923 -61487557 + MIR SINE MIR 59 256 -6 1090 183 39 0 chr17 23951028 23951236 -61487244 - MER20 DNA MER1_type -3 216 1 249 311 67 25 chr17 23951397 23951516 -61486964 + L2 LINE L2 3190 3313 0 1493 157 107 20 chr17 23951943 23952288 -61486192 + THE1C LTR MaLR 1 375 0 183 80 0 0 chr17 23952639 23952664 -61485816 + (TGGA)n Simple_repeat Simple_repeat 4 28 0 1791 145 26 48 chr17 23952744 23952841 -61485639 + MER2 DNA MER2_type 1 99 -245 2299 113 3 0 chr17 23952841 23953143 -61485337 - AluSp SINE Alu -10 303 1 1791 145 26 48 chr17 23953143 23953397 -61485083 + MER2 DNA MER2_type 99 344 0 294 143 11 143 chr17 23954406 23954497 -61483983 - SN5 Other centromeric -77 378 300 992 308 40 11 chr17 23959249 23959769 -61478711 + L1MC4 LINE L1 5479 6013 -2029 246 99 37 37 chr17 23959881 23959962 -61478518 + A-rich Low_complexity Low_complexity 4 84 0 7110 41 2 0 chr17 23963260 23964917 -61473563 - L1PA5 LINE L1 0 6154 4495 568 304 105 22 chr17 23967014 23967415 -61471065 + ERVL LTR ERVL 4007 4440 -1324 351 184 112 61 chr17 23967868 23967935 -61470545 - L1MD3 LINE L1 -74 7921 7846 1630 187 0 23 chr17 23967935 23968245 -61470235 + AluJo SINE Alu 1 303 -9 351 184 112 61 chr17 23968245 23968275 -61470205 - L1MD3 LINE L1 -149 7846 7819 324 289 37 30 chr17 23968301 23968436 -61470044 - L1MC3 LINE L1 -154 7631 7496 905 196 58 0 chr17 23968436 23968625 -61469855 - Tigger3(Golem) DNA MER2_type -98 2931 2732 655 209 9 0 chr17 23968626 23968741 -61469739 + FLAM_C SINE Alu 2 117 -16 395 197 0 13 chr17 23968786 23968862 -61469618 - Tigger3(Golem) DNA MER2_type -2951 78 4 659 214 121 0 chr17 23968866 23969006 -61469474 - MER2 DNA MER2_type -188 157 1 1099 239 40 71 chr17 23969032 23969504 -61468976 - L1ME3A LINE L1 -161 6005 5537 605 238 21 0 chr17 23969550 23969693 -61468787 + MIR SINE MIR 47 192 -70 326 298 169 28 chr17 23970557 23970648 -61467832 + L1ME4a LINE L1 5878 5955 -166 2139 129 3 0 chr17 23970648 23970950 -61467530 + AluSx SINE Alu 1 303 -9 326 298 169 28 chr17 23970950 23971036 -61467444 + L1ME4a LINE L1 5955 6080 -41 704 321 64 19 chr17 23971268 23971629 -61466851 + LTR16A LTR ERVL 21 397 -53 255 288 147 31 chr17 23971652 23971843 -61466637 + L2 LINE L2 3100 3312 -1 2294 122 0 0 chr17 23972069 23972372 -61466108 + AluSg SINE Alu 1 303 -7 2309 113 3 0 chr17 23972454 23972755 -61465725 + AluSp SINE Alu 1 302 -11 1297 189 42 67 chr17 23972759 23973042 -61465438 + AluJo SINE Alu 1 268 -44 1867 183 3 0 chr17 23973111 23973417 -61465063 + AluJo SINE Alu 1 307 -5 422 288 95 41 chr17 23973516 23973842 -61464638 + L1MC/D LINE L1 5377 5727 -465 1290 153 9 52 chr17 23973845 23974074 -61464406 + AluJo SINE Alu 88 306 -6 1278 214 6 67 chr17 23974103 23974434 -61464046 + AluSx SINE Alu 1 311 -1 213 219 61 24 chr17 23975061 23975143 -61463337 + L2 LINE L2 2041 2125 -1189 1777 175 7 0 chr17 23975221 23975534 -61462946 + AluJb SINE Alu 1 315 0 561 289 77 66 chr17 23975576 23975882 -61462598 + L2 LINE L2 2131 2445 -869 1943 157 3 22 chr17 23975882 23976200 -61462280 - AluSx SINE Alu 0 312 1 561 289 77 66 chr17 23976200 23976346 -61462134 + L2 LINE L2 2445 2588 -726 643 215 15 0 chr17 23976348 23976483 -61461997 - MER89 LTR ERV1 0 559 423 1889 163 6 19 chr17 23976483 23976891 -61461589 - AluJb SINE Alu 0 404 1 2210 120 10 0 chr17 23976991 23977299 -61461181 - AluSp SINE Alu -2 311 1 2265 131 0 0 chr17 23977313 23977625 -61460855 - AluSx SINE Alu 0 312 1 382 151 0 0 chr17 23977627 23977700 -61460780 - L1M4 LINE L1 -946 5200 5128 1784 140 18 87 chr17 23977733 23977850 -61460630 + MER47A DNA MER2_type 1 124 -2199 2214 113 3 3 chr17 23977850 23978143 -61460337 + AluSp SINE Alu 3 295 -18 306 0 0 0 chr17 23978153 23978187 -61460293 + (CAA)n Simple_repeat Simple_repeat 3 36 0 1491 117 17 35 chr17 23978187 23978418 -61460062 + AluY SINE Alu 85 311 0 1784 140 18 87 chr17 23978418 23978681 -61459799 + MER47A DNA MER2_type 131 366 0 689 281 215 7 chr17 23978700 23979105 -61459375 - L2 LINE L2 -773 2541 2053 381 248 64 64 chr17 23979106 23979263 -61459217 + MIR SINE MIR 101 257 -5 729 224 29 6 chr17 23979674 23979848 -61458632 - MER45A DNA AcHobo 0 178 1 1931 136 41 0 chr17 23980180 23980502 -61457978 - AluSq SINE Alu 0 335 2 1550 166 72 4 chr17 23980830 23981108 -61457372 - AluJb SINE Alu -15 297 1 2012 132 10 7 chr17 23981116 23981411 -61457069 - AluJb SINE Alu -14 298 3 181 291 13 25 chr17 23982044 23982123 -61456357 - L2 LINE L2 -181 3091 3014 313 331 93 0 chr17 23982208 23982359 -61456121 + L2 LINE L2 1545 1709 -1605 479 168 0 10 chr17 23982374 23982475 -61456005 + GA-rich Low_complexity Low_complexity 4 103 0 390 306 123 12 chr17 23983209 23983379 -61455101 - MIR SINE MIR -22 240 52 2158 134 3 10 chr17 23983689 23984002 -61454478 - AluJb SINE Alu -1 311 1 347 235 24 0 chr17 23984003 23984088 -61454392 - L2 LINE L2 -1515 1799 1713 626 296 141 30 chr17 23984091 23984558 -61453922 + LTR33 LTR ERVL 1 519 -2 287 48 0 24 chr17 23984564 23984606 -61453874 + (TCCC)n Simple_repeat Simple_repeat 4 44 0 1219 290 94 52 chr17 23984609 23984658 -61453822 - L2 LINE L2 -1623 1691 1646 2098 146 10 7 chr17 23984658 23984960 -61453520 + AluSx SINE Alu 1 303 -9 1219 290 94 52 chr17 23984960 23985353 -61453127 - L2 LINE L2 -1668 1646 1201 2247 118 3 3 chr17 23985353 23985666 -61452814 - AluSq SINE Alu 0 313 1 1219 290 94 52 chr17 23985666 23985980 -61452500 - L2 LINE L2 -2113 1201 902 219 260 80 73 chr17 23986002 23986152 -61452328 - L2 LINE L2 -2719 595 445 435 130 0 26 chr17 23986526 23986603 -61451877 - AluJb SINE Alu -178 134 60 247 191 44 15 chr17 23986612 23986680 -61451800 - MIR SINE MIR -109 153 84 426 219 0 0 chr17 23987365 23987447 -61451033 + L2 LINE L2 3232 3313 0 333 355 53 0 chr17 23987750 23987978 -61450502 + L2 LINE L2 2467 2706 -608 403 216 39 0 chr17 23988070 23988172 -61450308 - MER5A DNA MER1_type -80 109 4 702 306 72 16 chr17 23988176 23988679 -61449801 + L2 LINE L2 2763 3302 -11 225 277 62 0 chr17 23989059 23989124 -61449356 - MIR SINE MIR -112 150 82 * 230 213 93 27 chr17 23989094 23989169 -61449311 - MIR SINE MIR -72 136 57 * 509 309 73 32 chr17 23989162 23989408 -61449072 + L2 LINE L2 3051 3306 -7 1693 168 44 7 chr17 23989450 23989748 -61448732 + AluJo SINE Alu 1 309 -3 1811 160 0 58 chr17 23990148 23990461 -61448019 + AluJo SINE Alu 1 295 -17 803 212 0 62 chr17 23990606 23990799 -61447681 + MER5A DNA MER1_type 7 187 -2 488 208 66 0 chr17 23991597 23991703 -61446777 - MLT1H1 LTR MaLR -438 117 5 467 264 42 14 chr17 23992096 23992155 -61446325 + MIR SINE MIR 101 157 -105 2393 93 7 0 chr17 23992155 23992465 -61446015 + AluSq SINE Alu 1 312 -1 467 264 42 14 chr17 23992465 23992549 -61445931 + MIR SINE MIR 157 248 -14 608 228 57 5 chr17 23992586 23992779 -61445701 + L1M4 LINE L1 4976 5178 -968 476 284 135 10 chr17 23993252 23993460 -61445020 - MIR SINE MIR 0 262 29 189 74 0 0 chr17 23993960 23993987 -61444493 + (GGGGA)n Simple_repeat Simple_repeat 2 28 0 26 64 0 0 chr17 23993988 23994035 -61444445 + GC_rich Low_complexity Low_complexity 1 47 0 23 68 0 0 chr17 23994271 23994315 -61444165 + GC_rich Low_complexity Low_complexity 1 44 0 373 265 109 20 chr17 23996460 23996607 -61441873 + MIR3 SINE MIR 34 193 -15 252 254 32 16 chr17 23996824 23996887 -61441593 + MIR SINE MIR 82 145 -63 970 296 149 8 chr17 23997264 23997659 -61440821 - MLT1J LTR MaLR -45 466 16 470 183 269 91 chr17 23998812 23998881 -61439599 + MIR SINE MIR 27 82 -180 417 244 122 33 chr17 23998881 23999061 -61439419 + MER91A DNA MER1_type 1 196 0 470 183 269 91 chr17 23999061 23999188 -61439292 + MIR SINE MIR 82 258 -4 537 183 0 0 chr17 23999652 23999756 -61438724 + T-rich Low_complexity Low_complexity 3 106 0 207 0 0 0 chr17 23999756 23999779 -61438701 + (TC)n Simple_repeat Simple_repeat 1 23 0 801 189 0 0 chr17 24000916 24001038 -61437442 + AluJb SINE Alu 157 278 -34 2187 94 39 0 chr17 24001066 24001352 -61437128 - AluSx SINE Alu -15 297 1 1488 129 0 9 chr17 24001720 24001945 -61436535 - AluSg/x SINE Alu -6 304 82 2110 141 3 0 chr17 24003850 24004149 -61434331 - AluSx SINE Alu -2 310 11 298 335 204 11 chr17 24004895 24005086 -61433394 - MIR SINE MIR -18 244 17 560 273 195 5 chr17 24005487 24005868 -61432612 - L1ME4a LINE L1 -19 6102 5599 1538 128 163 4 chr17 24006005 24006263 -61432217 + AluJb SINE Alu 1 299 -13 385 275 9 18 chr17 24006653 24006762 -61431718 - MIR3 SINE MIR -6 202 95 329 211 102 0 chr17 24007362 24007476 -61431004 - L1ME LINE L1 -385 5736 5604 185 302 16 0 chr17 24007742 24007805 -61430675 + L2 LINE L2 2991 3054 -218 193 322 99 33 chr17 24007921 24008042 -61430438 + L2 LINE L2 3185 3313 0 1862 149 0 0 chr17 24008209 24008478 -61430002 + AluJb SINE Alu 29 297 -15 354 327 58 27 chr17 24008678 24008935 -61429545 - L1ME4a LINE L1 -12 6109 5845 211 250 241 9 chr17 24009796 24009908 -61428572 + MIR SINE MIR 88 225 -37 356 236 123 9 chr17 24009999 24010105 -61428375 + MIR SINE MIR 20 137 -71 220 273 136 0 chr17 24010954 24011042 -61427438 + MIR SINE MIR 49 148 -114 664 242 65 16 chr17 24011114 24011300 -61427180 + MIR SINE MIR 3 197 -65 512 141 0 0 chr17 24011301 24011379 -61427101 + MER2 DNA MER2_type 1 78 -267 2386 101 0 0 chr17 24011404 24011700 -61426780 - AluSc SINE Alu -13 296 1 361 217 72 0 chr17 24011700 24011783 -61426697 + MER2 DNA MER2_type 257 345 0 205 256 0 0 chr17 24011783 24011822 -61426658 + MIR SINE MIR 197 235 -27 546 211 35 21 chr17 24012487 24012629 -61425851 - MIR SINE MIR -117 145 2 242 350 80 0 chr17 24013769 24013906 -61424574 - MIR SINE MIR -62 200 53 313 338 83 15 chr17 24015263 24015396 -61423084 + MIR SINE MIR 27 168 -94 226 286 143 0 chr17 24015456 24015526 -61422954 + L2 LINE L2 3169 3248 -24 325 319 133 57 chr17 24015973 24016183 -61422297 + L2 LINE L2 3005 3238 -34 791 153 0 36 chr17 24016183 24016320 -61422160 - FLAM_C SINE Alu -1 132 1 325 319 133 57 chr17 24016320 24016357 -61422123 + L2 LINE L2 3238 3271 -1 223 327 65 9 chr17 24017258 24017365 -61421115 + MIR SINE MIR 33 145 -63 404 268 79 24 chr17 24017513 24017677 -61420803 + MIR SINE MIR 70 242 -20 382 300 23 15 chr17 24018844 24018974 -61419506 + MIR SINE MIR 119 249 -13 220 211 99 0 chr17 24019910 24019981 -61418499 - MIR SINE MIR -70 192 115 198 329 117 22 chr17 24022108 24022245 -61416235 - L2 LINE L2 0 3272 3123 343 286 131 40 chr17 24023407 24023582 -61414898 + L1MC/D LINE L1 5588 5778 -2030 198 143 0 0 chr17 24023738 24023773 -61414707 + (CA)n Simple_repeat Simple_repeat 2 36 0 1530 173 3 71 chr17 24023784 24023970 -61414510 - AluJo SINE Alu -10 302 146 432 0 0 0 chr17 24023970 24024018 -61414462 + (TG)n Simple_repeat Simple_repeat 2 49 0 1530 173 3 71 chr17 24024018 24024155 -61414325 - AluJo SINE Alu -166 146 1 379 331 12 47 chr17 24025117 24025286 -61413194 + MIR3 SINE MIR 35 197 -11 291 233 217 0 chr17 24025451 24025580 -61412900 + MIR SINE MIR 102 258 -4 580 234 80 60 chr17 24025751 24025952 -61412528 - MIR SINE MIR -2 260 56 227 222 74 0 chr17 24028218 24028272 -61410208 + L3 LINE CR1 1513 1570 -7 658 276 158 11 chr17 24030055 24030410 -61408070 - MER113 DNA MER1_type? -55 466 60 2341 87 0 26 chr17 24030713 24031023 -61407457 + AluSx SINE Alu 1 302 -10 200 243 114 29 chr17 24031175 24031245 -61407235 - MER5A DNA MER1_type 0 189 114 576 215 58 35 chr17 24031328 24031500 -61406980 - MER5B DNA MER1_type -2 176 1 307 361 8 23 chr17 24032085 24032215 -61406265 + L3 LINE CR1 166 293 -1284 190 215 138 15 chr17 24032961 24033026 -61405454 - MIR SINE MIR -123 139 67 * 229 366 171 5 chr17 24033024 24033240 -61405240 + L3 LINE CR1 850 1101 -476 219 238 0 0 chr17 24033648 24033690 -61404790 - L2 LINE L2 -17 3296 3255 220 300 0 0 chr17 24033784 24033844 -61404636 - MIR SINE MIR -44 218 159 183 80 0 0 chr17 24033919 24033944 -61404536 + (T)n Simple_repeat Simple_repeat 1 25 0 459 78 324 10 chr17 24033953 24034055 -61404425 - AluSc SINE Alu 0 309 176 1228 176 0 30 chr17 24034056 24034289 -61404191 + THE1-int LTR MaLR 522 747 -833 1428 92 0 0 chr17 24034290 24034464 -61404016 - AluSx SINE Alu -138 174 1 218 346 131 26 chr17 24034621 24034774 -61403706 - MER91A DNA MER1_type -27 169 1 312 294 20 10 chr17 24034785 24034887 -61403593 - MIR SINE MIR -150 112 10 247 356 30 45 chr17 24034946 24035078 -61403402 + L3 LINE CR1 1439 1568 -9 448 270 26 9 chr17 24035646 24035761 -61402719 - MIR SINE MIR -25 237 121 1195 163 23 32 chr17 24035861 24036082 -61402398 + MER20 DNA MER1_type 1 219 0 565 108 0 0 chr17 24036092 24036166 -61402314 + AluS SINE Alu 11 84 -228 1216 268 55 10 chr17 24036248 24036633 -61401847 + MLT1I LTR MaLR 5 406 -3 198 250 90 40 chr17 24036820 24036920 -61401560 - MIR SINE MIR -122 140 36 209 240 0 20 chr17 24037567 24037617 -61400863 + MIR SINE MIR 102 150 -112 945 217 14 47 chr17 24038185 24038397 -61400083 + MIR SINE MIR 31 235 -27 1860 108 8 0 chr17 24039443 24039684 -61398796 - AluSp SINE Alu -70 243 1 403 350 84 9 chr17 24040111 24040337 -61398143 - MIR SINE MIR 0 262 20 194 328 31 0 chr17 24040354 24040418 -61398062 + MIR3 SINE MIR 90 155 -53 2198 113 0 3 chr17 24040515 24040840 -61397640 - AluSx SINE Alu 0 324 1 1647 163 0 98 chr17 24041040 24041100 -61397380 + AluJo SINE Alu 3 67 -245 2477 71 3 0 chr17 24041100 24041397 -61397083 - AluY SINE Alu -12 299 2 1647 163 0 98 chr17 24041397 24041673 -61396807 + AluJo SINE Alu 67 306 -6 363 193 63 79 chr17 24042052 24042241 -61396239 + MIR SINE MIR 31 214 -48 264 260 25 106 chr17 24042330 24042460 -61396020 + MIR SINE MIR 34 165 -43 2282 101 7 7 chr17 24044250 24044546 -61393934 + AluSx SINE Alu 1 296 -16 499 232 45 26 chr17 24044617 24044772 -61393708 - L1ME3A LINE L1 -8 6162 6005 899 219 27 41 chr17 24044862 24045118 -61393362 - L1ME3A LINE L1 -208 5962 5709 917 154 0 0 chr17 24045118 24045248 -61393232 + FLAM_C SINE Alu 1 130 -3 899 219 27 41 chr17 24045248 24045283 -61393197 - L1ME3A LINE L1 -461 5709 5675 2328 124 0 3 chr17 24046186 24046500 -61391980 + AluSq SINE Alu 1 313 0 532 273 98 52 chr17 24046580 24046906 -61391574 - MLT1J LTR MaLR -159 352 12 690 199 106 0 chr17 24047028 24047179 -61391301 + MER7A DNA MER2_type 1 165 -181 449 198 0 0 chr17 24047178 24047259 -61391221 + MER7A DNA MER2_type 266 346 0 * 180 0 0 0 chr17 24047421 24047441 -61391039 + (T)n Simple_repeat Simple_repeat 1 20 0 523 206 169 12 chr17 24047957 24048117 -61390363 + MIR SINE MIR 78 262 0 201 196 43 0 chr17 24048317 24048363 -61390117 + CT-rich Low_complexity Low_complexity 1 48 0 272 153 0 51 chr17 24048376 24048435 -61390045 - L1ME4a LINE L1 -7 6114 6059 888 92 23 0 chr17 24048542 24048672 -61389808 - MER4D LTR ERV1 -28 875 743 * 2354 141 35 45 chr17 24048664 24049126 -61389354 + MER4D LTR ERV1 156 612 -291 1398 146 160 37 chr17 24049135 24049403 -61389077 - AluSx SINE Alu 0 302 2 225 341 49 12 chr17 24049767 24049849 -61388631 - L2 LINE L2 0 3272 3188 226 213 59 125 chr17 24049965 24050101 -61388379 - L2 LINE L2 -261 3011 2885 347 298 46 33 chr17 24051862 24052013 -61386467 - MIR SINE MIR -34 228 76 23 0 0 0 chr17 24052347 24052370 -61386110 + AT_rich Low_complexity Low_complexity 1 23 0 386 279 34 50 chr17 24052871 24053050 -61385430 + MER5B DNA MER1_type 3 178 0 208 297 40 27 chr17 24053052 24053126 -61385354 - MIR3 SINE MIR -14 194 120 822 134 87 0 chr17 24053143 24053270 -61385210 - AluJo/FRAM SINE Alu -11 301 164 1586 174 41 7 chr17 24053272 24053542 -61384938 - AluJb SINE Alu -33 279 1 199 147 29 0 chr17 24053890 24053924 -61384556 + MIR SINE MIR 219 253 -9 325 327 63 22 chr17 24054819 24055042 -61383438 + L1ME LINE L1 5525 5756 -414 711 185 96 0 chr17 24055160 24055306 -61383174 + AluJb SINE Alu 150 309 -3 1348 102 0 31 chr17 24055413 24055609 -61382871 + MER30B DNA MER1_type 1 190 0 754 157 0 0 chr17 24055972 24056087 -61382393 + FLAM_C SINE Alu 1 115 -18 26 0 0 0 chr17 24056089 24056115 -61382365 + AT_rich Low_complexity Low_complexity 1 26 0 213 39 0 0 chr17 24057017 24057043 -61381437 + (CCTG)n Simple_repeat Simple_repeat 1 26 0 926 206 41 32 chr17 24057539 24057758 -61380722 - MIR SINE MIR -1 261 41 509 253 60 24 chr17 24057920 24058086 -61380394 - LTR48B LTR ERV1 0 644 473 757 180 0 30 chr17 24058087 24058254 -61380226 - LTR29 LTR ERV1 -324 298 137 2383 70 0 22 chr17 24058376 24058690 -61379790 - AluY SINE Alu -4 307 1 286 261 17 52 chr17 24058694 24058809 -61379671 - L1MC5 LINE L1 -30 7931 7821 2051 140 24 0 chr17 24058809 24059102 -61379378 - AluSx SINE Alu -12 300 1 601 296 74 0 chr17 24060058 24060261 -61378219 + MIR SINE MIR 28 245 -17 474 249 60 75 chr17 24060283 24060564 -61377916 - L1ME4a LINE L1 -240 5881 5605 378 0 0 0 chr17 24060567 24060609 -61377871 + (TG)n Simple_repeat Simple_repeat 2 43 0 2077 137 0 36 chr17 24060634 24060803 -61377677 - AluSx SINE Alu -17 295 140 2517 84 0 0 chr17 24060803 24061113 -61377367 - AluSg SINE Alu 0 310 1 2077 137 0 36 chr17 24061113 24061249 -61377231 - AluSx SINE Alu -172 140 1 1952 129 20 10 chr17 24061444 24061738 -61376742 - AluSx SINE Alu -15 297 1 1006 237 141 42 chr17 24061751 24062185 -61376295 - L2 LINE L2 -19 3294 2818 2274 101 20 0 chr17 24063100 24063397 -61375083 + AluSx SINE Alu 1 303 -9 748 162 81 27 chr17 24063497 24063645 -61374835 - AluJb SINE Alu -24 288 133 632 261 116 14 chr17 24064996 24065203 -61373277 + MIR SINE MIR 10 237 -25 23 0 0 0 chr17 24065203 24065226 -61373254 + AT_rich Low_complexity Low_complexity 1 23 0 486 310 0 32 chr17 24065228 24065386 -61373094 - L2 LINE L2 0 3313 3161 637 157 20 10 chr17 24065387 24065489 -61372991 + FLAM_A SINE Alu 19 121 -21 357 306 86 19 chr17 24065493 24065702 -61372778 - L2 LINE L2 -138 3175 2953 292 280 64 32 chr17 24066628 24066753 -61371727 - L2 LINE L2 -1 3271 3143 4232 95 2 0 chr17 24067395 24067944 -61370536 - MER41A LTR ERV1 -4 550 1 342 254 130 22 chr17 24067977 24068115 -61370365 - MIR3 SINE MIR -54 154 2 2009 152 0 16 chr17 24068282 24068591 -61369889 - AluJo SINE Alu -8 304 1 287 274 36 12 chr17 24068656 24068740 -61369740 + L2 LINE L2 3169 3254 -18 466 267 22 72 chr17 24068839 24069019 -61369461 + MIR SINE MIR 16 186 -76 226 250 120 43 chr17 24069052 24069144 -61369336 + MIR SINE MIR 164 262 0 303 202 225 0 chr17 24069337 24069426 -61369054 + MIR SINE MIR 37 145 -63 407 188 0 104 chr17 24069500 24069692 -61368788 + CT-rich Low_complexity Low_complexity 3 174 0 246 182 0 99 chr17 24069716 24069837 -61368643 + CT-rich Low_complexity Low_complexity 2 110 0 220 258 320 6 chr17 24070600 24070778 -61367702 + L2 LINE L2 2697 2930 -384 357 199 114 125 chr17 24070851 24070954 -61367526 + L2 LINE L2 3139 3242 -71 222 37 0 0 chr17 24070954 24070981 -61367499 + (TTTTC)n Simple_repeat Simple_repeat 4 30 0 1846 135 51 4 chr17 24070984 24071258 -61367222 - AluSx SINE Alu -25 287 1 357 199 114 125 chr17 24071258 24071326 -61367154 + L2 LINE L2 3244 3312 -1 294 267 192 62 chr17 24071828 24071974 -61366506 + MIR3 SINE MIR 31 195 -13 1197 102 6 11 chr17 24072255 24072431 -61366049 - L1PB3 LINE L1 -15 6139 5965 184 324 141 41 chr17 24072473 24072643 -61365837 + MIR SINE MIR 28 214 -48 763 142 0 0 chr17 24072717 24072823 -61365657 + FLAM_C SINE Alu 2 107 -36 23 33 0 0 chr17 24072823 24072853 -61365627 + AT_rich Low_complexity Low_complexity 1 30 0 411 283 118 106 chr17 24073051 24073465 -61365015 + L1ME4a LINE L1 5638 6056 -65 2442 80 17 0 chr17 24073879 24074180 -61364300 + AluSp SINE Alu 1 306 -7 328 248 41 21 chr17 24074292 24074437 -61364043 + LTR16A LTR ERVL 16 163 -287 1984 134 38 3 chr17 24074805 24075095 -61363385 - AluSx SINE Alu -12 300 1 257 351 0 0 chr17 24075101 24075175 -61363305 - L2 LINE L2 -2 3311 3238 279 230 140 17 chr17 24075547 24075681 -61362799 - MIR SINE MIR -58 150 3 400 317 107 53 chr17 24076309 24076552 -61361928 + MIR SINE MIR 4 259 -3 383 312 7 28 chr17 24077370 24077511 -61360969 + MIR3 SINE MIR 15 152 -56 393 167 0 0 chr17 24077654 24077726 -61360754 - MSTB1 LTR MaLR 0 432 361 2321 96 0 3 chr17 24077726 24078028 -61360452 + AluSx SINE Alu 1 301 -11 969 110 0 22 chr17 24078040 24078176 -61360304 + FLAM_C SINE Alu 1 133 -10 320 24 71 0 chr17 24078176 24078218 -61360262 - MSTB LTR MaLR -65 367 323 298 165 25 51 chr17 24078232 24078311 -61360169 - AluS SINE Alu -2 299 223 * 1671 194 24 21 chr17 24078274 24078610 -61359870 - MSTB LTR MaLR -89 337 1 345 273 151 7 chr17 24078718 24078857 -61359623 - L1ME3A LINE L1 -2 6168 6010 431 185 7 89 chr17 24078938 24079073 -61359407 - L1ME3A LINE L1 -1988 5820 5697 656 164 49 8 chr17 24079129 24079251 -61359229 + FLAM_C SINE Alu 1 127 -16 2464 73 0 0 chr17 24079257 24079544 -61358936 + AluSc SINE Alu 1 287 -22 208 326 0 22 chr17 24080018 24080110 -61358370 + CT-rich Low_complexity Low_complexity 2 91 0 207 176 0 0 chr17 24080568 24080602 -61357878 + (TG)n Simple_repeat Simple_repeat 1 34 0 242 283 120 36 chr17 24080639 24080835 -61357645 + MIR SINE MIR 20 261 -1 814 92 8 25 chr17 24081081 24081201 -61357279 + FLAM_C SINE Alu 26 143 0 261 320 0 0 chr17 24081211 24081286 -61357194 + Charlie4 DNA MER1_type 1877 1951 -10 225 171 0 0 chr17 24081466 24081501 -61356979 - Alu SINE Alu -235 68 34 1882 151 14 0 chr17 24081501 24081786 -61356694 + AluSx SINE Alu 13 301 -11 1179 165 0 100 chr17 24081798 24082059 -61356421 - MER46A DNA MER2_type 0 236 2 362 192 0 26 chr17 24082803 24082881 -61355599 - MIR SINE MIR -151 111 36 1448 160 0 0 chr17 24082986 24083198 -61355282 - AluJb SINE Alu -17 295 84 594 326 19 30 chr17 24083903 24084167 -61354313 - MIR SINE MIR -1 261 1 201 225 0 0 chr17 24084199 24084239 -61354241 + (CAGC)n Simple_repeat Simple_repeat 1 40 0 377 235 29 67 chr17 24084516 24084636 -61353844 + MER33 DNA MER1_type 1 86 -97 367 315 172 19 chr17 24084670 24085259 -61353221 + L2 LINE L2 2512 3251 -62 289 316 71 6 chr17 24085839 24086007 -61352473 - MIR SINE MIR -71 191 13 211 279 0 16 chr17 24086044 24086105 -61352375 + MIR SINE MIR 90 149 -113 858 101 78 0 chr17 24087127 24087256 -61351224 + MER85 DNA T2_type 1 139 0 3156 108 75 4 chr17 24087270 24087762 -61350718 + MER1A DNA MER1_type 1 527 0 1508 188 20 32 chr17 24087781 24088126 -61350354 - L1MD3 LINE L1 0 7995 7655 1466 183 30 55 chr17 24088169 24088452 -61350028 - L1MC3 LINE L1 -643 7142 6870 216 0 0 0 chr17 24088452 24088476 -61350004 + (TG)n Simple_repeat Simple_repeat 2 25 0 1466 183 30 55 chr17 24088476 24088590 -61349890 - L1MC3 LINE L1 -915 6870 6755 603 166 93 14 chr17 24088630 24088769 -61349711 - L1MB3 LINE L1 -1 6182 6033 1947 138 6 29 chr17 24089148 24089460 -61349020 - AluJo SINE Alu -7 305 1 408 264 57 0 chr17 24090510 24090616 -61347864 + MIR3 SINE MIR 67 178 -30 190 279 33 16 chr17 24091491 24091552 -61346928 + L2 LINE L2 3211 3272 0 552 263 46 0 chr17 24092340 24092515 -61345965 + MER3 DNA MER1_type 25 207 -2 194 242 0 48 chr17 24092675 24092737 -61345743 - L2 LINE L2 -329 2984 2926 256 319 0 0 chr17 24094533 24094602 -61343878 - L2 LINE L2 0 3313 3245 209 33 33 0 chr17 24094774 24094804 -61343676 + (TTTG)n Simple_repeat Simple_repeat 4 34 0 2088 122 0 0 chr17 24094806 24095084 -61343396 - AluSx SINE Alu -34 278 1 327 216 216 0 chr17 24095144 24095246 -61343234 + L2 LINE L2 3190 3313 0 271 250 0 0 chr17 24095820 24095884 -61342596 + MIR SINE MIR 57 120 -142 437 361 89 7 chr17 24095896 24096176 -61342304 + L2 LINE L2 2432 2734 -580 186 21 64 85 chr17 24096183 24096230 -61342250 + (TTTCC)n Simple_repeat Simple_repeat 5 50 0 1417 178 35 8 chr17 24096237 24096495 -61341985 - AluJo SINE Alu -47 265 1 388 311 143 32 chr17 24096507 24096901 -61341579 + L2 LINE L2 2732 3179 -134 2404 100 3 6 chr17 24096921 24097232 -61341248 - AluSq SINE Alu -3 310 1 343 277 12 0 chr17 24097593 24097676 -61340804 - MLT1K LTR MaLR -324 264 181 331 226 36 109 chr17 24098023 24098160 -61340320 - L1ME4a LINE L1 -23 6098 5972 288 295 23 39 chr17 24098228 24098357 -61340123 - MIR SINE MIR -14 248 122 1728 186 7 7 chr17 24098370 24098665 -61339815 - AluJo SINE Alu -17 295 1 368 241 168 7 chr17 24098698 24098835 -61339645 - L1ME4a LINE L1 -7 6114 5956 301 314 16 33 chr17 24099903 24100024 -61338456 + MIR SINE MIR 11 129 -133 672 145 8 40 chr17 24100254 24100378 -61338102 + FLAM_C SINE Alu 5 124 -19 213 196 59 0 chr17 24100800 24100851 -61337629 + MIR3 SINE MIR 124 177 -31 1424 227 34 3 chr17 24102448 24102769 -61335711 + MER58B DNA MER1_type 3 333 -8 270 295 266 0 chr17 24103246 24103385 -61335095 + MIR SINE MIR 81 256 -6 422 278 9 35 chr17 24103781 24103896 -61334584 - MER5B DNA MER1_type -66 112 1 314 260 0 0 chr17 24103902 24103975 -61334505 - MIR3 SINE MIR -49 159 87 243 308 177 0 chr17 24106085 24106215 -61332265 + Charlie8 DNA MER1_type 19 171 -2246 1196 134 106 0 chr17 24106331 24106548 -61331932 + MER57A LTR ERV1 1 240 -163 205 355 9 45 chr17 24107845 24107955 -61330525 + L2 LINE L2 3080 3185 -87 3832 148 10 2 chr17 24107990 24108622 -61329858 - MER41B LTR ERV1 0 624 1 1521 237 144 5 chr17 24108737 24109159 -61329321 - MLT1E2 LTR MaLR -8 618 138 1683 129 25 53 chr17 24109177 24109495 -61328985 - Tigger7 DNA MER2_type -1 2586 2278 1375 173 4 43 chr17 24109498 24109752 -61328728 - Tigger7 DNA MER2_type -2212 275 32 274 186 34 0 chr17 24109860 24109919 -61328561 + MIR SINE MIR 85 145 -117 310 227 89 0 chr17 24111449 24111567 -61326913 - MIR SINE MIR -61 147 40 189 344 44 0 chr17 24111868 24111958 -61326522 - MIR SINE MIR -149 113 20 835 229 36 0 chr17 24112261 24112453 -61326027 + MIR SINE MIR 44 242 -20 2001 160 3 6 chr17 24112537 24112850 -61325630 + AluSx SINE Alu 1 312 0 253 292 10 20 chr17 24113525 24113640 -61324840 + MIR SINE MIR 44 155 -60 254 153 17 68 chr17 24113684 24113743 -61324737 - MSTA LTR MaLR 0 428 373 1536 112 0 0 chr17 24113759 24113956 -61324524 - AluSg SINE Alu -58 252 56 1637 135 102 27 chr17 24113958 24114291 -61324189 - MSTA LTR MaLR -41 387 30 287 277 109 89 chr17 24114291 24114754 -61323726 + L2 LINE L2 2778 3247 -25 187 310 42 0 chr17 24115090 24115147 -61323333 + MIR SINE MIR 89 151 -111 1239 188 31 0 chr17 24115147 24115376 -61323104 - MER46A DNA MER2_type 0 236 1 187 310 42 0 chr17 24115376 24115389 -61323091 + MIR SINE MIR 151 162 -100 580 283 126 12 chr17 24116279 24116526 -61321954 - MLT1I LTR MaLR -1 408 134 291 56 0 0 chr17 24117145 24117181 -61321299 - U2 snRNA snRNA -152 36 1 2221 124 3 0 chr17 24117885 24118183 -61320297 - AluSx SINE Alu -13 299 1 321 265 127 30 chr17 24118208 24118374 -61320106 + MIR SINE MIR 45 226 -36 2336 118 0 0 chr17 24119816 24120120 -61318360 - AluSx SINE Alu -8 304 1 304 277 12 12 chr17 24121825 24121908 -61316572 - MER5A DNA MER1_type -5 184 102 262 250 12 38 chr17 24122195 24122275 -61316205 - MIR SINE MIR -165 97 20 308 329 42 36 chr17 24122343 24122510 -61315970 + MIR SINE MIR 30 197 -65 1073 264 59 30 chr17 24122946 24123514 -61314966 - L1MC4a LINE L1 0 6162 5574 312 355 35 12 chr17 24123966 24124135 -61314345 - L2 LINE L2 -213 3059 2887 264 224 34 56 chr17 24124380 24124487 -61313993 + MIR SINE MIR 43 147 -81 248 285 179 8 chr17 24125792 24125915 -61312565 - MIR SINE MIR -6 256 113 1660 229 40 6 chr17 24126682 24127035 -61311445 - MLT1A1 LTR MaLR 0 365 1 387 285 66 0 chr17 24127045 24127182 -61311298 + MIR SINE MIR 47 192 -70 189 313 157 0 chr17 24127823 24127906 -61310574 - MIR SINE MIR -86 176 81 261 188 0 31 chr17 24128058 24128122 -61310358 - MER103 DNA DNA -97 69 8 511 336 67 5 chr17 24128298 24128521 -61309959 - MIR SINE MIR -6 256 20 678 277 173 9 chr17 24128939 24129257 -61309223 + MER113 DNA MER1_type? 1 370 -151 229 329 13 13 chr17 24129645 24129721 -61308759 + L2 LINE L2 3167 3242 -30 200 326 161 22 chr17 24129757 24130030 -61308450 - L2 LINE L2 -21 3292 2982 397 282 92 8 chr17 24130526 24130657 -61307823 - MIR SINE MIR -83 179 38 191 333 15 0 chr17 24130874 24130940 -61307540 - MIR SINE MIR -90 172 106 5898 158 76 38 chr17 24131938 24132223 -61306257 - Tigger3b DNA MER2_type -1798 1230 957 2073 119 3 0 chr17 24132223 24132508 -61305972 + AluSx SINE Alu 1 286 -26 5898 158 76 38 chr17 24132508 24133100 -61305380 - Tigger3b DNA MER2_type -2071 957 294 2193 108 0 19 chr17 24133100 24133415 -61305065 + AluSx SINE Alu 1 309 -3 5898 158 76 38 chr17 24133415 24133721 -61304759 - Tigger3b DNA MER2_type -2734 294 1 333 246 99 24 chr17 24133721 24133860 -61304620 - MIR SINE MIR -48 160 9 261 313 232 0 chr17 24134553 24134665 -61303815 - MIR3 SINE MIR -26 182 45 289 216 0 0 chr17 24136089 24136140 -61302340 + MER81 DNA DNA 39 89 -25 386 309 81 36 chr17 24137129 24137352 -61301128 - MIR SINE MIR -20 242 10 195 207 155 0 chr17 24137858 24137916 -61300564 + MER5B DNA MER1_type 112 178 0 349 270 111 0 chr17 24138150 24138276 -61300204 - MIR3 SINE MIR -30 178 39 1734 118 26 22 chr17 24138951 24139222 -61299258 + AluJo SINE Alu 6 277 -35 683 246 12 36 chr17 24139516 24139683 -61298797 + MER63 DNA MER1_type 1 789 -47 2002 121 0 0 chr17 24139799 24140080 -61298400 - AluSx SINE Alu -31 281 1 473 218 78 14 chr17 24141220 24141362 -61297118 + MIR SINE MIR 52 202 -60 426 340 13 19 chr17 24141492 24141651 -61296829 - MIR3 SINE MIR -39 169 12 612 252 64 41 chr17 24141880 24142098 -61296382 + MIR SINE MIR 7 229 -33 275 390 68 10 chr17 24143234 24143439 -61295041 + MIR SINE MIR 12 228 -34 1323 152 55 82 chr17 24143550 24143878 -61294602 - MER33 DNA MER1_type -2 322 4 217 283 329 0 chr17 24144039 24144191 -61294289 - MIR SINE MIR -14 248 47 2204 161 76 24 chr17 24145117 24145538 -61292942 - MER65A LTR ERV1 0 445 3 2760 114 58 5 chr17 24146240 24146652 -61291828 - MER61C LTR ERV1 0 434 1 1922 132 14 10 chr17 24146756 24147051 -61291429 - AluSx SINE Alu -15 297 2 350 283 75 68 chr17 24147057 24147322 -61291158 - L1ME4a LINE L1 -188 5933 5667 464 268 6 93 chr17 24147482 24147665 -61290815 - MER5B DNA MER1_type -8 170 4 1210 297 80 43 chr17 24148604 24149422 -61289058 - HAL1 LINE L1 -655 1852 1005 2117 118 0 13 chr17 24150473 24150778 -61287702 - AluSq SINE Alu -12 301 1 203 228 79 89 chr17 24151313 24151414 -61287066 + MIR3 SINE MIR 61 160 -48 236 214 71 0 chr17 24151417 24151487 -61286993 - MER58C DNA MER1_type -3 212 138 476 242 27 40 chr17 24151513 24151662 -61286818 - MER58C DNA MER1_type -55 160 140 352 289 0 0 chr17 24151723 24151814 -61286666 + MER58C DNA MER1_type 18 108 -107 913 121 23 0 chr17 24151814 24151946 -61286534 - AluJo SINE Alu -177 135 1 376 241 147 0 chr17 24152186 24152302 -61286178 - MER58C DNA MER1_type -14 201 69 2296 99 3 0 chr17 24152344 24152647 -61285833 - AluSx SINE Alu -8 304 1 1954 113 48 3 chr17 24152655 24152948 -61285532 - AluSg SINE Alu -4 306 1 293 256 11 22 chr17 24153371 24153461 -61285019 + L2 LINE L2 3184 3272 0 251 273 26 0 chr17 24153772 24153849 -61284631 - MIR3 SINE MIR -37 171 93 352 298 8 48 chr17 24155747 24155871 -61282609 + MER5A DNA MER1_type 63 181 -8 244 409 35 0 chr17 24158324 24158439 -61280041 - L2 LINE L2 -9 3263 3145 367 159 72 0 chr17 24159132 24159201 -61279279 + AluSp/q SINE Alu 219 292 -11 23 33 0 0 chr17 24159254 24159284 -61279196 + AT_rich Low_complexity Low_complexity 1 30 0 327 187 30 15 chr17 24159921 24160055 -61278425 + CT-rich Low_complexity Low_complexity 2 137 0 490 286 88 12 chr17 24161294 24161465 -61277015 - MIR SINE MIR -50 212 29 219 222 0 0 chr17 24161492 24161537 -61276943 - L2 LINE L2 -14 3258 3214 381 271 56 0 chr17 24161540 24161647 -61276833 + L1M4 LINE L1 2703 2815 -3331 1251 139 14 42 chr17 24161647 24161863 -61276617 + MER1B DNA MER1_type 130 339 0 663 323 16 0 chr17 24162322 24162514 -61275966 - MIR SINE MIR -28 234 40 1377 162 129 42 chr17 24162527 24162861 -61275619 - L1M3 LINE L1 -388 5795 5433 1250 279 159 7 chr17 24163280 24163326 -61275154 - L1ME3 LINE L1 -3 6159 6121 1795 148 7 13 chr17 24163326 24163630 -61274850 - AluJo SINE Alu -10 302 1 1250 279 159 7 chr17 24163630 24164081 -61274399 - L1ME3 LINE L1 -41 6121 5563 1739 169 0 25 chr17 24164081 24164401 -61274079 - AluJb SINE Alu 0 312 1 1250 279 159 7 chr17 24164401 24164469 -61274011 - L1ME3 LINE L1 -599 5563 5507 323 228 76 0 chr17 24165214 24165293 -61273187 + MIR3 SINE MIR 70 154 -54 216 0 0 0 chr17 24166008 24166032 -61272448 + (TCCTG)n Simple_repeat Simple_repeat 5 28 0 503 286 164 9 chr17 24166116 24166336 -61272144 + MIR SINE MIR 9 262 0 208 267 114 19 chr17 24166501 24166606 -61271874 - MIR SINE MIR -89 173 59 579 180 0 2 chr17 24167611 24167720 -61270760 + MIR SINE MIR 45 152 -56 280 129 77 0 chr17 24167806 24167866 -61270614 - MLT1D LTR MaLR -49 456 356 384 250 73 22 chr17 24168280 24168416 -61270064 - MIR SINE MIR -72 190 48 1677 170 85 85 chr17 24168547 24168734 -61269746 - MLT1D LTR MaLR -49 456 270 1795 169 0 10 chr17 24168734 24169047 -61269433 + AluJb SINE Alu 1 310 -2 1677 170 85 85 chr17 24169047 24169295 -61269185 - MLT1D LTR MaLR -234 271 21 466 214 11 112 chr17 24169412 24169599 -61268881 - L1MC4a LINE L1 -1954 5854 5687 1229 186 58 29 chr17 24169636 24169957 -61268523 + AluJo SINE Alu 1 329 0 241 345 24 0 chr17 24170414 24170498 -61267982 - MIR SINE MIR -130 132 47 226 333 0 24 chr17 24170649 24170733 -61267747 + MER102b DNA MER1_type 4 85 -256 516 232 66 38 chr17 24170733 24170944 -61267536 - L1MC5 LINE L1 -44 7917 7701 1752 173 0 10 chr17 24170951 24171240 -61267240 - AluJb SINE Alu -26 286 1 678 252 47 68 chr17 24171280 24171514 -61266966 + MER102b DNA MER1_type 106 334 -7 581 285 77 14 chr17 24171712 24171919 -61266561 - MIR SINE MIR -11 251 32 197 328 46 8 chr17 24172507 24172638 -61265842 + L2 LINE L2 3132 3267 -46 210 150 0 0 chr17 24173791 24173831 -61264649 + (CCCCCT)n Simple_repeat Simple_repeat 2 41 0 1426 153 12 20 chr17 24174045 24174204 -61264276 - AluJo SINE Alu -18 294 136 2054 114 0 3 chr17 24174204 24174503 -61263977 - AluSc SINE Alu -11 298 1 1426 153 12 20 chr17 24174503 24174597 -61263883 - AluJo SINE Alu -176 136 43 515 295 46 31 chr17 24174611 24174872 -61263608 - Tigger8 DNA MER2_type -186 480 216 2423 96 60 8 chr17 24175793 24176157 -61262323 + L1PA11 LINE L1 5782 6164 -10 350 98 0 1 chr17 24176175 24176421 -61262059 + AluSq SINE Alu 17 297 -4 21 0 0 0 chr17 24176431 24176452 -61262028 + AT_rich Low_complexity Low_complexity 1 21 0 579 251 54 18 chr17 24177109 24177276 -61261204 + MIR SINE MIR 20 192 -70 380 228 51 146 chr17 24177287 24177389 -61261091 + Charlie8 DNA MER1_type 1 111 -2306 663 238 0 0 chr17 24177389 24177511 -61260969 + FLAM_A SINE Alu 1 122 -11 380 228 51 146 chr17 24177511 24177662 -61260818 + Charlie8 DNA MER1_type 111 230 -2187 302 292 87 104 chr17 24178591 24178957 -61259523 + L2 LINE L2 2906 3265 -7 237 315 24 15 chr17 24179242 24179360 -61259120 + MIR SINE MIR 15 132 -76 273 256 128 0 chr17 24182090 24182176 -61256304 - MIR SINE MIR -122 140 44 442 313 53 40 chr17 24182193 24182420 -61256060 - L2 LINE L2 -1 3312 3083 418 311 90 24 chr17 24182473 24182640 -61255840 + MER5B DNA MER1_type 1 178 0 291 258 82 10 chr17 24182640 24182737 -61255743 - L2 LINE L2 -504 2810 2707 684 278 28 0 chr17 24182741 24182917 -61255563 + MIR SINE MIR 79 259 -3 194 236 180 34 chr17 24182931 24183020 -61255460 - L2 LINE L2 -608 2706 2605 243 61 0 0 chr17 24183209 24183242 -61255238 + (GGGA)n Simple_repeat Simple_repeat 2 34 0 323 266 59 53 chr17 24184615 24184784 -61253696 + MER5A DNA MER1_type 14 183 -6 2014 127 0 34 chr17 24184787 24185111 -61253369 + AluSq SINE Alu 1 313 0 530 276 6 26 chr17 24186766 24186922 -61251558 - MER103 DNA DNA -12 154 2 717 250 211 28 chr17 24186980 24187340 -61251140 + L2 LINE L2 2888 3313 0 249 257 40 0 chr17 24188394 24188468 -61250012 - L2 LINE L2 -60 3212 3136 198 215 114 13 chr17 24188928 24189007 -61249473 + MIR SINE MIR 64 150 -58 512 276 52 6 chr17 24189387 24189561 -61248919 - MIR SINE MIR -70 192 11 316 325 65 7 chr17 24190559 24190713 -61247767 - MIR3 SINE MIR -26 182 20 288 307 98 49 chr17 24191261 24191505 -61246975 + L2 LINE L2 3052 3307 -6 302 295 13 0 chr17 24191657 24191735 -61246745 + MIR SINE MIR 14 92 -170 180 111 0 0 chr17 24192264 24192291 -61246189 + (CTCA)n Simple_repeat Simple_repeat 1 27 0 295 241 72 0 chr17 24192301 24192384 -61246096 - L2 LINE L2 -35 3237 3149 422 294 160 16 chr17 24192457 24192651 -61245829 + MIR SINE MIR 15 236 -26 377 348 120 0 chr17 24193783 24193967 -61244513 + MIR SINE MIR 2 207 -55 2051 111 10 0 chr17 24193977 24194265 -61244215 + AluSg SINE Alu 1 291 -19 1931 124 17 17 chr17 24194394 24194693 -61243787 - AluSx SINE Alu -13 299 1 2241 102 0 0 chr17 24195163 24195468 -61243012 + AluSx SINE Alu 1 305 -7 233 374 144 0 chr17 24196814 24196953 -61241527 + MIR SINE MIR 95 253 -9 1634 189 3 7 chr17 24197518 24197825 -61240655 - AluJo SINE Alu -6 306 1 888 240 114 70 chr17 24199448 24199894 -61238586 - MER113 DNA MER1_type? -42 479 14 280 344 0 41 chr17 24200269 24200391 -61238089 + L2 LINE L2 2458 2574 -740 191 402 10 0 chr17 24200860 24200957 -61237523 + L2 LINE L2 3200 3297 -16 1233 286 40 17 chr17 24203190 24203717 -61234763 - L1MC4 LINE L1 -2025 6017 5479 194 250 204 38 chr17 24208432 24208564 -61229916 + MIR SINE MIR 90 243 -19 326 230 14 93 chr17 24209173 24209312 -61229168 - L1 LINE L1 -2784 3362 3235 2082 157 21 3 chr17 24209621 24209959 -61228521 - MER2 DNA MER2_type 0 344 1 183 80 0 0 chr17 24210039 24210064 -61228416 + (TCCA)n Simple_repeat Simple_repeat 4 28 0 1666 138 110 51 chr17 24210406 24210760 -61227720 - THE1C LTR MaLR 0 375 1 1972 138 0 3 chr17 24211662 24211967 -61226513 + AluSc SINE Alu 1 304 -5 1504 195 19 7 chr17 24212351 24212658 -61225822 + AluSx SINE Alu 1 311 -1 1061 198 0 0 chr17 24212732 24212924 -61225556 + AluSg/x SINE Alu 105 296 -16 570 225 0 23 chr17 24213577 24213706 -61224774 - L2 LINE L2 0 3313 3188 2082 100 7 3 chr17 24214203 24214493 -61223987 - AluSg SINE Alu -19 291 1 1743 132 0 4 chr17 24215202 24215459 -61223021 - AluSq SINE Alu -19 294 39 25 0 0 0 chr17 24215852 24215877 -61222603 + AT_rich Low_complexity Low_complexity 1 25 0 2024 92 0 7 chr17 24216204 24216485 -61221995 + AluY SINE Alu 1 279 -32 1209 189 4 17 chr17 24216516 24216749 -61221731 - AluJb SINE Alu -17 295 66 278 136 0 0 chr17 24216749 24216793 -61221687 - AluJo/FLAM SINE Alu -190 112 69 842 104 0 0 chr17 24217282 24217397 -61221083 + AluSq SINE Alu 1 115 -197 2285 185 65 7 chr17 24217407 24217855 -61220625 + MER9 LTR ERVK 38 511 0 5491 206 28 31 chr17 24217856 24219217 -61219263 + HERVK14 LTR ERVK 4 1381 -4564 5755 156 86 39 chr17 24219217 24220426 -61218054 - MER11A LTR ERVK 0 1266 1 7614 72 1 0 chr17 24220427 24221422 -61217058 - HERVK11 LTR ERVK -1 7952 6957 * 26995 89 6 2 chr17 24221407 24228079 -61210401 - HERVK11 LTR ERVK -1186 6767 1 4239 163 27 41 chr17 24228079 24228938 -61209542 - MER11C LTR ERVK 0 1071 225 1890 77 0 0 chr17 24229333 24229567 -61208913 - MER11B LTR ERVK -1002 234 1 28236 130 4 1 chr17 24229567 24233622 -61204858 + HERVK9 LTR ERVK 1121 5186 -730 566 301 5 19 chr17 24233593 24233809 -61204671 + HERVK9 LTR ERVK 5801 6013 -1739 * 3084 102 0 26 chr17 24233824 24234254 -61204226 + HERVK9 LTR ERVK 5183 5601 -315 1874 254 27 27 chr17 24234352 24235271 -61203209 + HERVK9 LTR ERVK 5635 5916 0 2268 186 62 9 chr17 24235278 24235730 -61202750 + MER9 LTR ERVK 34 509 -2 1111 168 20 10 chr17 24235732 24235993 -61202487 + AluSq SINE Alu 109 371 0 1346 109 0 26 chr17 24236031 24236223 -61202257 + AluSx SINE Alu 3 189 -123 818 144 30 8 chr17 24236225 24236357 -61202123 - AluSq SINE Alu -147 166 32 21 0 0 0 chr17 24237542 24237563 -61200917 + AT_rich Low_complexity Low_complexity 1 21 0 331 266 97 26 chr17 24237584 24237738 -61200742 - Tigger8 DNA MER2_type -165 501 337 2381 101 0 0 chr17 24237902 24238208 -61200272 - AluY SINE Alu -5 306 1 243 0 0 0 chr17 24238592 24238619 -61199861 + (TG)n Simple_repeat Simple_repeat 2 28 0 255 318 117 45 chr17 24238631 24238810 -61199670 - MIR SINE MIR -51 211 20 230 313 10 21 chr17 24238854 24238950 -61199530 + Tigger8 DNA MER2_type 141 235 -431 1750 165 7 10 chr17 24238960 24239251 -61199229 + AluJb SINE Alu 1 290 -22 2120 132 0 0 chr17 24239545 24239832 -61198648 - AluSc SINE Alu -22 287 1 2213 109 7 0 chr17 24239971 24240264 -61198216 - AluSc SINE Alu -14 295 1 2026 129 0 7 chr17 24240695 24240981 -61197499 + AluSg SINE Alu 3 286 -24 36 53 0 0 chr17 24242361 24242418 -61196062 + AT_rich Low_complexity Low_complexity 1 57 0 376 276 113 13 chr17 24242561 24242874 -61195606 - L1ME4a LINE L1 -194 5927 5571 213 39 0 0 chr17 24243041 24243067 -61195413 + (CA)n Simple_repeat Simple_repeat 1 26 0 210 367 140 10 chr17 24243973 24244180 -61194300 + L2 LINE L2 987 1220 -2094 2058 132 0 0 chr17 24244192 24244507 -61193973 + AluSg SINE Alu 2 316 0 2172 117 0 0 chr17 24244691 24244981 -61193499 - AluY SINE Alu -21 290 1 234 269 0 0 chr17 24245034 24245086 -61193394 + LTR30 LTR ERV1 1 52 -670 805 128 231 213 chr17 24245125 24245553 -61192927 + LTR12 LTR ERV1 48 483 -231 5874 133 9 36 chr17 24245570 24246540 -61191940 + HERV9 LTR ERV1 54 997 -7402 * 21891 111 10 5 chr17 24246536 24250896 -61187584 + HERV9 LTR ERV1 1155 5613 -2786 16539 115 5 15 chr17 24250888 24251255 -61187225 + HERV9 LTR ERV1 5972 6341 -2058 * 2062 53 16 0 chr17 24251255 24251500 -61186980 - L1PA5 LINE L1 -6 6148 5900 16539 115 5 15 chr17 24251500 24253585 -61184895 + HERV9 LTR ERV1 6341 8399 0 816 164 79 141 chr17 24253585 24253889 -61184591 + LTR12 LTR ERV1 1 285 -429 355 178 33 22 chr17 24253890 24253980 -61184500 + LTR30 LTR ERV1 553 643 -79 656 130 0 0 chr17 24253982 24254082 -61184398 + LTR12 LTR ERV1 615 714 0 226 309 147 33 chr17 24254233 24254505 -61183975 + L2 LINE L2 1791 2093 -1221 382 256 78 0 chr17 24254507 24254597 -61183883 - MER117 DNA MER1_type -97 100 4 725 161 17 0 chr17 24255122 24255240 -61183240 + FLAM_A SINE Alu 20 139 -3 311 326 121 23 chr17 24255340 24255555 -61182925 + MIR SINE MIR 3 238 -24 2072 114 7 3 chr17 24255639 24255929 -61182551 + AluSc SINE Alu 1 291 -18 2106 110 0 14 chr17 24256059 24256349 -61182131 - AluSx SINE Alu -26 286 1 319 339 15 39 chr17 24256532 24256662 -61181818 - L2 LINE L2 -1 3271 3145 219 362 35 26 chr17 24256748 24256864 -61181616 - L2 LINE L2 -177 3095 2979 4443 217 52 64 chr17 24257138 24259015 -61179465 - L1ME1 LINE L1 -5 6161 4261 4562 81 242 0 chr17 24259015 24259680 -61178800 + LTR12 LTR ERV1 1 826 0 4443 217 52 64 chr17 24259680 24259727 -61178753 - L1ME1 LINE L1 -1905 4261 4215 369 98 0 216 chr17 24259727 24259829 -61178651 + MADE1 DNA Mariner 1 80 0 4443 217 52 64 chr17 24259829 24260131 -61178349 - L1ME1 LINE L1 -1951 4215 3976 277 258 40 53 chr17 24260177 24260328 -61178152 - L1MD3 LINE L1 -14 7981 7833 245 257 53 71 chr17 24260500 24260613 -61177867 - MIR SINE MIR -80 128 18 839 171 0 7 chr17 24260795 24260935 -61177545 + FRAM SINE Alu 23 161 -15 1876 145 3 14 chr17 24260938 24261074 -61177406 + AluSx SINE Alu 1 137 -175 2138 124 7 10 chr17 24261074 24261373 -61177107 + AluSp SINE Alu 1 298 -15 1876 145 3 14 chr17 24261373 24261525 -61176955 + AluSx SINE Alu 137 286 -26 423 0 0 0 chr17 24261532 24261579 -61176901 + (TA)n Simple_repeat Simple_repeat 2 48 0 751 171 0 0 chr17 24261688 24261805 -61176675 + AluSq SINE Alu 117 233 -80 670 95 0 0 chr17 24261805 24261889 -61176591 - AluS SINE Alu -215 97 14 7446 58 37 0 chr17 24261899 24262904 -61175576 - L1PA8 LINE L1 -3 6169 5152 469 329 74 0 chr17 24263231 24263380 -61175100 - L2 LINE L2 0 3272 3113 1924 218 7 9 chr17 24264368 24264817 -61173663 + L1MC2 LINE L1 4759 5206 -940 2003 126 4 0 chr17 24264818 24265128 -61173352 + AluSg SINE Alu 5 315 0 3120 185 91 10 chr17 24265128 24265821 -61172659 + L1MC2 LINE L1 5596 6344 0 301 240 130 0 chr17 24266014 24266114 -61172366 + L1ME4a LINE L1 5971 6083 -38 220 211 26 0 chr17 24266366 24266442 -61172038 + (CTTA)n Simple_repeat Simple_repeat 2 79 0 339 125 0 28 chr17 24268195 24268267 -61170213 - L1MD2 LINE L1 -2 6357 6288 888 178 11 23 chr17 24268268 24268442 -61170038 + FRAM SINE Alu 1 172 -4 4713 171 42 12 chr17 24268464 24268728 -61169752 + Tigger1 DNA MER2_type 14 269 -2149 1746 166 4 4 chr17 24268728 24269060 -61169420 - AluJb SINE Alu 0 337 6 4713 171 42 12 chr17 24269060 24269636 -61168844 + Tigger1 DNA MER2_type 269 880 -1538 1087 90 0 0 chr17 24269637 24269771 -61168709 + AluSg SINE Alu 1 134 -176 2080 134 0 0 chr17 24269771 24270081 -61168399 + AluSx SINE Alu 1 310 0 7630 115 20 2 chr17 24270081 24271217 -61167263 + Tigger1 DNA MER2_type 870 2026 -392 404 310 70 0 chr17 24271217 24271359 -61167121 + MIR SINE MIR 110 261 -1 2195 110 3 3 chr17 24271486 24271787 -61166693 - AluSq SINE Alu -12 301 1 1976 139 3 10 chr17 24271992 24272295 -61166185 + AluSx SINE Alu 1 301 -11 1730 145 53 11 chr17 24272304 24272587 -61165893 + AluSx SINE Alu 1 295 -17 1953 152 11 20 chr17 24272588 24272937 -61165543 - L1MB4 LINE L1 -7 6173 5828 1930 115 56 0 chr17 24272939 24273208 -61165272 - AluSx SINE Alu -28 284 1 1133 272 146 15 chr17 24273453 24273511 -61164969 - L1ME3 LINE L1 -3 6159 6110 1701 180 7 3 chr17 24273511 24273806 -61164674 - AluJo SINE Alu -16 296 1 1133 272 146 15 chr17 24273806 24274269 -61164211 - L1ME3 LINE L1 -52 6110 5570 326 113 0 70 chr17 24274272 24274343 -61164137 - Alu SINE Alu 0 302 237 283 180 230 30 chr17 24274397 24274497 -61163983 - MLT1D LTR MaLR -49 456 337 316 273 57 57 chr17 24274824 24275000 -61163480 - MIR SINE MIR -77 185 10 1690 184 93 50 chr17 24275080 24275273 -61163207 - MLT1D LTR MaLR -49 456 273 1801 165 0 16 chr17 24275273 24275588 -61162892 + AluJb SINE Alu 3 312 0 1690 184 93 50 chr17 24275588 24275812 -61162668 - MLT1D LTR MaLR -232 273 21 361 262 13 54 chr17 24275929 24276078 -61162402 - L1MC4a LINE L1 -1954 5854 5712 1461 212 0 20 chr17 24276161 24276463 -61162017 + AluJo SINE Alu 1 296 -16 951 208 0 30 chr17 24276269 24276466 -61162014 + AluJb SINE Alu 109 299 -13 216 366 24 0 chr17 24276924 24277006 -61161474 - MIR SINE MIR -132 130 47 527 226 61 38 chr17 24277236 24277448 -61161032 - L1MC5 LINE L1 -44 7917 7701 1593 170 46 21 chr17 24277455 24277738 -61160742 - AluJb SINE Alu -22 290 1 748 230 47 72 chr17 24277780 24278015 -61160465 + MER102b DNA MER1_type 106 334 -7 480 244 25 75 chr17 24278262 24278422 -61160058 - MIR SINE MIR -79 183 32 1718 158 20 20 chr17 24280502 24280800 -61157680 - AluJo SINE Alu -14 298 1 544 274 37 37 chr17 24280803 24281048 -61157432 - Tigger8 DNA MER2_type -186 480 236 2213 97 56 0 chr17 24282004 24282345 -61156135 + L1PA11 LINE L1 5805 6164 -10 1592 109 0 0 chr17 24282351 24282553 -61155927 + AluSq SINE Alu 5 206 -107 333 102 0 0 chr17 24282553 24282602 -61155878 + AluSq SINE Alu 242 290 -11 21 0 0 0 chr17 24282612 24282633 -61155847 + AT_rich Low_complexity Low_complexity 1 21 0 530 264 54 18 chr17 24283290 24283457 -61155023 + MIR SINE MIR 20 192 -70 298 224 50 162 chr17 24283468 24283570 -61154910 + Charlie8 DNA MER1_type 1 113 -217 687 205 0 0 chr17 24283570 24283692 -61154788 + FLAM_A SINE Alu 1 122 -11 298 224 50 162 chr17 24283692 24283848 -61154632 + Charlie8 DNA MER1_type 113 230 -100 224 359 21 0 chr17 24284802 24284944 -61153536 + L2 LINE L2 2906 3050 -222 253 294 22 14 chr17 24285412 24285532 -61152948 + MIR SINE MIR 15 134 -74 338 277 21 0 chr17 24288971 24289065 -61149415 + MER5A DNA MER1_type 17 112 -77 544 258 7 26 chr17 24290732 24290887 -61147593 - MER103 DNA DNA -12 154 3 734 231 214 31 chr17 24290946 24291306 -61147174 + L2 LINE L2 2888 3313 0 262 310 194 19 chr17 24291319 24291535 -61146945 + MIR SINE MIR 8 261 -1 236 257 40 0 chr17 24292361 24292435 -61146045 - L2 LINE L2 -60 3212 3136 407 293 29 0 chr17 24293350 24293490 -61144990 - MIR SINE MIR -77 185 42 352 305 65 7 chr17 24294516 24294670 -61143810 - MIR3 SINE MIR -26 182 20 236 262 213 18 chr17 24295276 24295440 -61143040 + L2 LINE L2 3118 3313 0 361 277 294 6 chr17 24295565 24295742 -61142738 + MIR SINE MIR 6 233 -29 183 80 0 0 chr17 24296180 24296205 -61142275 + (TTCA)n Simple_repeat Simple_repeat 1 25 0 225 250 83 24 chr17 24296215 24296299 -61142181 - L2 LINE L2 -35 3237 3149 358 290 191 16 chr17 24296375 24296558 -61141922 + MIR SINE MIR 22 236 -26 421 329 127 4 chr17 24297691 24297919 -61140561 + MIR SINE MIR 2 257 -5 2019 121 13 30 chr17 24298084 24298389 -61140091 - AluSx SINE Alu -12 300 1 1554 131 177 0 chr17 24299866 24300126 -61138354 + AluSx SINE Alu 1 306 -6 1714 162 14 17 chr17 24301155 24301452 -61137028 - AluJo SINE Alu -16 296 1 807 243 74 102 chr17 24303090 24303299 -61135181 - MER113 DNA MER1_type? -42 479 266 2199 116 3 22 chr17 24303299 24303618 -61134862 + AluSp SINE Alu 1 313 0 807 243 74 102 chr17 24303618 24303881 -61134599 - MER113 DNA MER1_type? -255 266 20 184 392 20 0 chr17 24304766 24304868 -61133612 + MIR SINE MIR 79 182 -80 382 241 0 18 chr17 24305239 24305351 -61133129 - MER103 DNA DNA -15 151 42 1963 144 10 10 chr17 24305854 24306153 -61132327 + AluJo SINE Alu 1 299 -13 235 254 51 0 chr17 24306653 24306712 -61131768 + MER94 DNA DNA 4 65 -69 392 345 113 13 chr17 24306845 24307074 -61131406 - MIR SINE MIR -3 259 8 195 303 15 0 chr17 24307151 24307217 -61131263 - L3b LINE CR1 -238 1345 1279 421 225 193 66 chr17 24308154 24308279 -61130201 + MIR SINE MIR 38 146 -116 1737 156 3 73 chr17 24308279 24308430 -61130050 + AluJb SINE Alu 1 120 -192 2215 96 0 23 chr17 24308430 24308733 -61129747 + AluSx SINE Alu 14 309 -3 1737 156 3 73 chr17 24308733 24308895 -61129585 + AluJb SINE Alu 120 292 -20 421 225 193 66 chr17 24308895 24308982 -61129498 + MIR SINE MIR 146 262 0 198 265 76 98 chr17 24308960 24309092 -61129388 - L2 LINE L2 -10 3303 3175 * 2299 115 3 0 chr17 24309496 24309801 -61128679 + AluSx SINE Alu 5 310 -2 495 281 36 7 chr17 24309848 24309987 -61128493 - MIR SINE MIR -6 256 114 295 244 22 33 chr17 24310288 24310378 -61128102 + L2 LINE L2 3184 3272 0 621 181 56 7 chr17 24310717 24310861 -61127619 - L2 LINE L2 0 3313 3163 391 151 0 19 chr17 24310998 24311078 -61127402 - AluS SINE Alu -246 62 4 738 223 51 0 chr17 24311225 24311400 -61127080 - MER5A DNA MER1_type -4 185 2 337 335 132 7 chr17 24311523 24311675 -61126805 - MIR SINE MIR -71 191 21 353 288 88 65 chr17 24311834 24312004 -61126476 + MIR SINE MIR 86 259 -3 248 303 114 15 chr17 24312210 24312286 -61126194 - L2 LINE L2 -2 3270 3203 4878 116 35 13 chr17 24312286 24313052 -61125428 - LTR39 LTR ERV1 0 783 1 248 303 114 15 chr17 24313052 24313107 -61125373 - L2 LINE L2 -69 3203 3126 342 283 22 74 chr17 24313110 24313379 -61125101 - LTR39-int LTR ERV1 -58 8062 7808 318 348 37 29 chr17 24313450 24313694 -61124786 - LTR49-int LTR ERV1 -535 4419 4174 5681 82 37 17 chr17 24313821 24314305 -61124175 + LTR12 LTR ERV1 1 509 -317 2448 70 6 10 chr17 24314305 24314617 -61123863 + AluY SINE Alu 1 311 0 5681 82 37 17 chr17 24314617 24314942 -61123538 + LTR12 LTR ERV1 509 826 0 9066 177 65 73 chr17 24315828 24316351 -61122129 - LTR49-int LTR ERV1 -612 5571 5045 2407 71 0 13 chr17 24316351 24316662 -61121818 - AluY SINE Alu -4 307 1 9066 177 65 73 chr17 24316662 24318354 -61120126 - LTR49-int LTR ERV1 -1138 5045 3341 2064 143 0 7 chr17 24318354 24318654 -61119826 + AluJo SINE Alu 1 298 -14 9066 177 65 73 chr17 24318654 24319905 -61118575 - LTR49-int LTR ERV1 -2842 3341 2024 387 0 0 0 chr17 24319905 24319948 -61118532 + (CA)n Simple_repeat Simple_repeat 2 44 0 9066 177 65 73 chr17 24319948 24320136 -61118344 - LTR49-int LTR ERV1 -4159 2024 1836 464 63 16 0 chr17 24320136 24320199 -61118281 + MER57B LTR ERV1 1 64 -370 * 1299 101 53 0 chr17 24320197 24320386 -61118094 - MER57B LTR ERV1 -167 267 69 378 302 69 51 chr17 24322847 24323355 -61115125 + MER65B LTR ERV1 1 445 0 317 347 56 20 chr17 24323363 24323559 -61114921 + MER65B-int LTR ERV1 12 214 -4657 377 161 0 103 chr17 24323900 24323987 -61114493 + LTR57-int LTR ERVL 323 400 -4943 344 229 0 86 chr17 24323907 24324012 -61114468 + MER65B-int LTR ERV1 816 911 -875 * 783 151 5 87 chr17 24324017 24324202 -61114278 + LTR49-int LTR ERV1 618 787 -6750 380 120 80 0 chr17 24324265 24324340 -61114140 + LTR39 LTR ERV1 19 99 -684 6040 109 48 62 chr17 24324560 24324590 -61113890 - Tigger3b DNA MER2_type -1797 1231 1202 2427 121 6 3 chr17 24324590 24324953 -61113527 - THE1B LTR MaLR 0 364 1 6040 109 48 62 chr17 24324953 24326064 -61112416 - Tigger3b DNA MER2_type -1826 1202 106 4154 135 59 39 chr17 24326380 24327148 -61111332 + LTR39 LTR ERV1 1 783 0 1200 214 88 9 chr17 24327807 24328124 -61110356 + LTR49-int LTR ERV1 939 1280 -5051 2275 136 140 5 chr17 24328124 24328530 -61109950 + LTR8A LTR ERV1 1 461 -266 843 182 12 18 chr17 24328538 24328703 -61109777 + LTR8A LTR ERV1 564 727 0 335 251 1 0 chr17 24328703 24328794 -61109686 + LTR49-int LTR ERV1 746 1917 -2963 451 168 32 11 chr17 24328910 24329005 -61109475 + LTR49-int LTR ERV1 1372 1468 -4863 1200 105 0 0 chr17 24329005 24329177 -61109303 - MER57B LTR ERV1 0 434 263 233 346 9 0 chr17 24329202 24329309 -61109171 - MER65B LTR ERV1 -162 369 262 336 254 66 16 chr17 24329435 24329557 -61108923 - MER65B LTR ERV1 -403 128 1 217 198 30 119 chr17 24330033 24330134 -61108346 - L2 LINE L2 -179 3134 3043 281 81 48 65 chr17 24330134 24330196 -61108284 - Alu SINE Alu -7 293 233 756 237 8 71 chr17 24330222 24330475 -61108005 - L2 LINE L2 -1537 1777 1541 180 256 0 0 chr17 24330469 24330512 -61107968 + L3 LINE CR1 1408 1450 -127 * 1796 154 29 20 chr17 24331030 24331221 -61107259 - AluJo SINE Alu -2 310 113 369 0 0 0 chr17 24331221 24331262 -61107218 + (TTA)n Simple_repeat Simple_repeat 2 42 0 1796 154 29 20 chr17 24331262 24331376 -61107104 - AluJo SINE Alu -199 113 2 209 191 0 0 chr17 24331532 24331574 -61106906 + (TTCA)n Simple_repeat Simple_repeat 1 42 0 464 313 110 0 chr17 24331628 24331791 -61106689 + MIR SINE MIR 2 182 -80 992 292 102 33 chr17 24331814 24332235 -61106245 - L2 LINE L2 0 3313 2864 525 200 48 24 chr17 24335201 24335326 -61103154 + MER45A DNA AcHobo 51 178 0 373 361 89 9 chr17 24335536 24335749 -61102731 - MIR SINE MIR -16 246 17 252 0 0 0 chr17 24336066 24336094 -61102386 + (CA)n Simple_repeat Simple_repeat 2 29 0 687 254 17 6 chr17 24337010 24337183 -61101297 + MIR SINE MIR 5 179 -83 593 269 23 29 chr17 24337355 24337526 -61100954 - MER5B DNA MER1_type -8 170 1 195 152 0 0 chr17 24337561 24337594 -61100886 + MIR3 SINE MIR 170 202 -6 2092 140 3 3 chr17 24337608 24337916 -61100564 + AluJo SINE Alu 1 308 -4 2200 114 6 16 chr17 24338073 24338389 -61100091 + AluSq SINE Alu 1 313 0 856 231 18 74 chr17 24338528 24338757 -61099723 - MIR SINE MIR -3 259 44 299 291 209 0 chr17 24339043 24339177 -61099303 + MIR3 SINE MIR 38 199 -9 285 190 215 13 chr17 24339214 24339293 -61099187 - MIR SINE MIR -34 228 134 294 51 0 0 chr17 24339293 24339332 -61099148 - MADE1 DNA Mariner 0 80 42 303 93 0 0 chr17 24340119 24340162 -61098318 + (CA)n Simple_repeat Simple_repeat 1 43 0 597 306 102 0 chr17 24340285 24340491 -61097989 - L3 LINE CR1 -2 1575 1349 300 265 31 20 chr17 24341663 24341761 -61096719 - MIR3 SINE MIR -22 186 88 189 107 0 0 chr17 24342012 24342040 -61096440 + (ATTG)n Simple_repeat Simple_repeat 2 29 0 2054 142 0 0 chr17 24342044 24342332 -61096148 - AluJb SINE Alu -24 288 1 572 183 61 61 chr17 24342401 24342581 -61095899 - L1MC5 LINE L1 -30 7931 7752 22 88 0 0 chr17 24342645 24342702 -61095778 + AT_rich Low_complexity Low_complexity 1 57 0 2894 146 6 10 chr17 24343191 24343678 -61094802 + MER31A LTR ERV1 1 485 0 306 0 0 0 chr17 24343711 24343745 -61094735 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 373 296 136 15 chr17 24344180 24344379 -61094101 + L1ME4a LINE L1 5895 6117 -4 1728 126 24 38 chr17 24344635 24344928 -61093552 + AluJb SINE Alu 1 289 -23 23 0 0 0 chr17 24345709 24345732 -61092748 + GC_rich Low_complexity Low_complexity 1 23 0 305 264 14 0 chr17 24346047 24346119 -61092361 - MIR SINE MIR -110 152 80 378 107 0 0 chr17 24346628 24346684 -61091796 + (CA)n Simple_repeat Simple_repeat 2 57 0 185 295 369 0 chr17 24347198 24347320 -61091160 + MIR SINE MIR 1 167 -95 672 269 25 0 chr17 24347540 24347700 -61090780 + MIR SINE MIR 39 202 -60 271 240 13 13 chr17 24348003 24348078 -61090402 + FLAM_A SINE Alu 58 132 -1 180 111 0 0 chr17 24348081 24348108 -61090372 + (GAAAA)n Simple_repeat Simple_repeat 5 31 0 1992 138 10 16 chr17 24348112 24348417 -61090063 + AluSx SINE Alu 6 308 -4 247 296 28 74 chr17 24348952 24349168 -61089312 + L2 LINE L2 2840 3045 -227 724 275 92 0 chr17 24349250 24349468 -61089012 - MIR SINE MIR -12 250 13 279 331 47 60 chr17 24349731 24349990 -61088490 + MIR SINE MIR 1 255 -7 405 308 101 0 chr17 24350004 24350173 -61088307 - MIR SINE MIR -17 245 60 1409 147 9 18 chr17 24351497 24351721 -61086759 + AluJo SINE Alu 1 222 -90 291 184 35 11 chr17 24351729 24351816 -61086664 + GA-rich Low_complexity Low_complexity 3 91 0 384 235 96 37 chr17 24351834 24351970 -61086510 + MIR SINE MIR 47 190 -72 180 0 0 0 chr17 24352539 24352559 -61085921 + (T)n Simple_repeat Simple_repeat 1 20 0 1884 161 0 7 chr17 24353187 24353501 -61084979 - AluSx SINE Alu 0 312 1 278 237 26 0 chr17 24353879 24353955 -61084525 - MER34B LTR ERV1 -159 406 329 236 153 17 68 chr17 24354253 24354312 -61084168 - MIR SINE MIR -59 203 148 673 252 38 4 chr17 24354529 24354755 -61083725 - MER34B LTR ERV1 -4 561 325 1628 148 69 31 chr17 24354755 24355046 -61083434 + AluJo SINE Alu 1 302 -10 673 252 38 4 chr17 24355046 24355057 -61083423 - MER34B LTR ERV1 -240 325 316 618 14 0 0 chr17 24355057 24355128 -61083352 + (GGAAA)n Simple_repeat Simple_repeat 1 71 0 539 259 112 79 chr17 24355147 24355479 -61083001 - MER34 LTR ERV1 -222 343 1 325 311 48 0 chr17 24355490 24355593 -61082887 + MIR SINE MIR 47 154 -108 432 193 18 0 chr17 24355845 24355959 -61082521 - L1MB4 LINE L1 0 6180 6065 629 244 101 0 chr17 24356577 24356773 -61081707 - MIR SINE MIR -21 241 18 762 203 46 46 chr17 24356793 24357028 -61081452 - MIR SINE MIR -35 227 2 377 229 38 8 chr17 24357213 24357344 -61081136 - MER113 DNA MER1_type? -366 155 21 185 317 29 19 chr17 24357382 24357486 -61080994 + MIR3 SINE MIR 83 187 -21 821 271 93 16 chr17 24357937 24358258 -61080222 - LTR16C LTR ERVL -40 451 106 1922 153 0 33 chr17 24358814 24359114 -61079366 + AluJb SINE Alu 1 290 -22 816 172 43 37 chr17 24359122 24359285 -61079195 + FRAM SINE Alu 1 161 -15 329 272 224 0 chr17 24359359 24359484 -61078996 + L1ME4a LINE L1 5966 6118 -3 339 273 84 35 chr17 24360030 24360173 -61078307 + MIR SINE MIR 37 186 -76 590 267 67 6 chr17 24360365 24360530 -61077950 - MIR SINE MIR -56 206 32 431 254 82 100 chr17 24360982 24361313 -61077167 + L2 LINE L2 2932 3256 -16 3543 171 35 22 chr17 24361313 24362030 -61076450 - L1MB7 LINE L1 -14 6170 5445 387 0 0 0 chr17 24362065 24362108 -61076372 + (TGGA)n Simple_repeat Simple_repeat 2 44 0 229 339 0 43 chr17 24362849 24362964 -61075516 + MER117 DNA MER1_type 8 117 -80 270 292 22 22 chr17 24363275 24363364 -61075116 + MIR SINE MIR 90 178 -84 1955 153 7 3 chr17 24364638 24364939 -61073541 - AluJo SINE Alu -10 302 1 719 219 45 76 chr17 24364939 24365031 -61073449 - L1MB7 LINE L1 -749 5397 5304 2060 127 38 0 chr17 24365031 24365322 -61073158 - AluSx SINE Alu -10 302 1 719 219 45 76 chr17 24365322 24365517 -61072963 - L1MB7 LINE L1 -842 5304 5119 249 343 56 0 chr17 24365536 24365644 -61072836 - L2 LINE L2 -262 3010 2897 2518 112 38 67 chr17 24365653 24365877 -61072603 - Tigger2a DNA MER2_type -2274 434 228 1766 158 13 47 chr17 24365877 24366175 -61072305 + AluJo SINE Alu 1 288 -24 2518 112 38 67 chr17 24366175 24366397 -61072083 - Tigger2a DNA MER2_type -2480 228 1 2216 136 32 25 chr17 24366480 24366885 -61071595 - MSTB LTR MaLR 0 426 19 357 307 82 60 chr17 24367080 24367104 -61071376 - L1ME4a LINE L1 -5 6116 6094 1851 150 3 33 chr17 24367104 24367410 -61071070 + AluJb SINE Alu 1 297 -15 357 307 82 60 chr17 24367410 24367526 -61070954 - L1ME4a LINE L1 -27 6094 5982 192 40 0 0 chr17 24367526 24367551 -61070929 + (CA)n Simple_repeat Simple_repeat 1 25 0 357 307 82 60 chr17 24367551 24367725 -61070755 - L1ME4a LINE L1 -139 5982 5794 664 275 69 0 chr17 24367829 24368018 -61070462 - MIR SINE MIR -8 254 53 389 306 89 38 chr17 24367950 24368241 -61070239 - L2 LINE L2 -706 2608 2303 * 2349 117 95 35 chr17 24368300 24368657 -61069823 + MSTA LTR MaLR 1 386 -42 2117 138 10 0 chr17 24368657 24368961 -61069519 - AluSx SINE Alu -5 307 1 2349 117 95 35 chr17 24368961 24369004 -61069476 + MSTA LTR MaLR 386 425 -3 220 274 0 0 chr17 24369677 24369728 -61068752 + L2 LINE L2 3261 3311 -2 961 277 93 27 chr17 24369794 24370159 -61068321 + L2 LINE L2 2925 3313 0 1465 240 70 28 chr17 24371170 24371478 -61067002 + L1ME3 LINE L1 4884 5178 -984 1772 161 3 46 chr17 24371478 24371802 -61066678 + AluJo SINE Alu 1 310 -2 1465 240 70 28 chr17 24371802 24372168 -61066312 + L1ME3 LINE L1 5178 5596 -566 327 171 154 57 chr17 24372180 24372303 -61066177 + L1ME3 LINE L1 5657 5791 -379 563 248 15 0 chr17 24372425 24372558 -61065922 + MER58B DNA MER1_type 207 341 0 306 235 12 12 chr17 24372563 24372644 -61065836 + L1ME3 LINE L1 5807 5887 -283 1021 170 0 6 chr17 24372644 24372809 -61065671 + AluSg/x SINE Alu 131 294 -18 826 227 104 20 chr17 24372809 24373060 -61065420 + L1ME3 LINE L1 5885 6156 -6 586 301 11 16 chr17 24373315 24373501 -61064979 - MER5A DNA MER1_type -3 186 2 6757 125 18 20 chr17 24373739 24374813 -61063667 - MER11C LTR ERVK 0 1071 1 2249 105 6 19 chr17 24375014 24375327 -61063153 - AluSg SINE Alu 0 310 2 241 266 0 0 chr17 24375540 24375604 -61062876 + L1MC/D LINE L1 5827 5890 -1918 1542 181 0 65 chr17 24375766 24376076 -61062404 - AluJo SINE Alu -22 290 1 191 200 0 20 chr17 24376151 24376201 -61062279 + GA-rich Low_complexity Low_complexity 4 52 0 499 299 183 0 chr17 24376642 24376839 -61061641 + MIR SINE MIR 24 256 -6 396 229 122 0 chr17 24377068 24377199 -61061281 + MER103 DNA DNA 14 160 -6 268 336 154 7 chr17 24377418 24377567 -61060913 + MIR SINE MIR 20 190 -72 298 202 46 101 chr17 24377622 24377731 -61060749 - MLT1K LTR MaLR 0 588 486 231 274 122 92 chr17 24377783 24377947 -61060533 + L3 LINE CR1 224 392 -1185 1758 169 43 10 chr17 24378348 24378649 -61059831 - AluJb SINE Alu -1 311 1 802 238 72 78 chr17 24378649 24378956 -61059524 - L1ME3 LINE L1 -55 6107 5803 292 300 11 0 chr17 24379016 24379106 -61059374 + L1M4 LINE L1 4007 4097 -2049 1629 166 7 43 chr17 24379120 24379422 -61059058 + AluJo SINE Alu 11 301 -11 422 234 86 16 chr17 24379456 24379584 -61058896 + MIR3 SINE MIR 42 178 -30 681 115 88 0 chr17 24379629 24379742 -61058738 + L1MB4 LINE L1 5836 5958 -222 2210 206 226 13 chr17 24379758 24380829 -61057651 + L1 LINE L1 3254 4722 -1424 731 234 5 16 chr17 24380845 24381029 -61057451 + MIR SINE MIR 81 262 0 360 254 66 16 chr17 24383488 24383610 -61054870 + MER65B LTR ERV1 1 128 -403 231 293 47 28 chr17 24383736 24383842 -61054638 + MER65B LTR ERV1 262 369 -162 * 311 231 55 93 chr17 24383809 24383991 -61054489 + MER65A LTR ERV1 267 441 -4 297 339 57 21 chr17 24384003 24384195 -61054285 + MER65A-int LTR ERV1 12 210 -4661 396 161 0 103 chr17 24384540 24384627 -61053853 + LTR57-int LTR ERVL 323 400 -4943 804 151 5 87 chr17 24384657 24384842 -61053638 + MER65A-int LTR ERV1 618 787 -6750 397 120 80 0 chr17 24384905 24384980 -61053500 + LTR39 LTR ERV1 19 99 -684 6464 102 52 67 chr17 24385200 24385230 -61053250 - Tigger3b DNA MER2_type -1797 1231 1202 2544 121 6 3 chr17 24385230 24385593 -61052887 - THE1B LTR MaLR 0 364 1 6464 102 52 67 chr17 24385593 24386704 -61051776 - Tigger3b DNA MER2_type -1826 1202 106 4367 134 59 39 chr17 24387020 24387788 -61050692 + LTR39 LTR ERV1 1 783 0 1296 214 88 9 chr17 24388447 24388764 -61049716 + MER65A-int LTR ERV1 939 1280 -5051 2366 136 140 5 chr17 24388764 24389170 -61049310 + LTR8A LTR ERV1 1 461 -266 890 182 12 18 chr17 24389178 24389343 -61049137 + LTR8A LTR ERV1 564 727 0 372 153 178 59 chr17 24389343 24389461 -61049019 + MER65A-int LTR ERV1 1277 1917 -2963 481 168 32 11 chr17 24389550 24389645 -61048835 + LOR1-int LTR ERV1 1372 1468 -4863 1260 105 0 0 chr17 24389645 24389817 -61048663 - MER57B LTR ERV1 0 434 263 373 270 101 62 chr17 24389842 24390197 -61048283 - MER65B LTR ERV1 -162 369 1 1373 101 53 0 chr17 24392657 24392846 -61045634 + MER57B LTR ERV1 69 267 -167 489 63 16 0 chr17 24392844 24392907 -61045573 - MER57B LTR ERV1 -370 64 1 * 1324 244 29 92 chr17 24392907 24393095 -61045385 + LOR1-int LTR ERV1 1836 2034 -3912 423 0 0 0 chr17 24393095 24393142 -61045338 + (TG)n Simple_repeat Simple_repeat 2 48 0 1324 244 29 92 chr17 24393142 24393531 -61044949 + LOR1-int LTR ERV1 2034 2377 -3569 * 2582 212 34 58 chr17 24393500 24394203 -61044277 + LOR1-int LTR ERV1 2627 3312 -3019 9720 153 58 57 chr17 24394219 24394393 -61044087 + LOR1-int LTR ERV1 2025 2197 -3986 2024 143 0 7 chr17 24394393 24394693 -61043787 - AluJo SINE Alu -14 298 1 9720 153 58 57 chr17 24394693 24396380 -61042100 + LOR1-int LTR ERV1 2197 3881 -2302 2378 71 0 13 chr17 24396380 24396691 -61041789 + AluY SINE Alu 1 307 -4 9720 153 58 57 chr17 24396691 24397214 -61041266 + LOR1-int LTR ERV1 3881 5571 -612 5940 83 37 17 chr17 24398100 24398425 -61040055 - LTR12 LTR ERV1 0 826 509 2359 77 6 10 chr17 24398425 24398737 -61039743 - AluY SINE Alu 0 311 1 5940 83 37 17 chr17 24398737 24399221 -61039259 - LTR12 LTR ERV1 -317 509 1 313 328 41 33 chr17 24399348 24399592 -61038888 + LOR1-int LTR ERV1 4174 4419 -535 362 279 22 74 chr17 24399663 24399932 -61038548 + LOR1-int LTR ERV1 7808 8062 -58 214 303 114 15 chr17 24399935 24399990 -61038490 + L2 LINE L2 3126 3174 -98 5135 116 35 13 chr17 24399990 24400756 -61037724 + LTR39 LTR ERV1 1 783 0 214 303 114 15 chr17 24400756 24400832 -61037648 + L2 LINE L2 3174 3270 -2 308 288 88 65 chr17 24401038 24401208 -61037272 - MIR SINE MIR -3 259 86 343 373 8 8 chr17 24401367 24401485 -61036995 + MIR SINE MIR 21 138 -124 758 223 51 0 chr17 24401642 24401817 -61036663 + MER5A DNA MER1_type 2 185 -4 1997 145 3 7 chr17 24401991 24402295 -61036185 + AluJb SINE Alu 10 312 0 21 36 0 0 chr17 24402486 24402514 -61035966 + AT_rich Low_complexity Low_complexity 1 28 0 1802 125 0 0 chr17 24402853 24403093 -61035387 - AluSg SINE Alu -14 296 57 511 250 39 32 chr17 24403097 24403253 -61035227 + MER63A DNA MER1_type 54 210 0 473 224 45 37 chr17 24403409 24403543 -61034937 - MER5B DNA MER1_type -30 148 14 1102 138 48 0 chr17 24403656 24403845 -61034635 - L1MA9 LINE L1 -1 6311 6114 265 306 72 0 chr17 24404839 24404950 -61033530 - MIR SINE MIR -46 216 98 2743 210 22 82 chr17 24404976 24405661 -61032819 - L1ME1 LINE L1 -195 5971 5339 1473 175 20 10 chr17 24405661 24405953 -61032527 - L1MB3 LINE L1 -2 6181 5887 2743 210 22 82 chr17 24405953 24406075 -61032405 - L1ME1 LINE L1 -827 5339 5211 1117 110 0 0 chr17 24406085 24406240 -61032240 - AluSg/x SINE Alu -6 306 152 1245 241 37 49 chr17 24406240 24406671 -61031809 + L2 LINE L2 2868 3293 -20 613 305 13 89 chr17 24406697 24406877 -61031603 - L2 LINE L2 -14 3258 3123 1342 196 77 25 chr17 24406877 24407204 -61031276 - MER2 DNA MER2_type 0 344 1 613 305 13 89 chr17 24407204 24407416 -61031064 - L2 LINE L2 -149 3123 2896 1816 168 0 7 chr17 24407640 24407926 -61030554 + AluJb SINE Alu 1 284 -28 222 105 0 0 chr17 24407926 24407964 -61030516 + (CTAA)n Simple_repeat Simple_repeat 3 40 0 1150 277 37 21 chr17 24407980 24408355 -61030125 + L1MC4a LINE L1 5517 5897 -1911 435 266 0 59 chr17 24409424 24409593 -61028887 - MIR SINE MIR -84 178 20 256 316 31 10 chr17 24409996 24410094 -61028386 + L3b LINE CR1 1294 1393 -190 2277 113 36 36 chr17 24410157 24410521 -61027959 + THE1B LTR MaLR 1 364 0 317 333 141 0 chr17 24411359 24411494 -61026986 - MIR SINE MIR -60 202 49 296 256 0 0 chr17 24412079 24412157 -61026323 + MIR SINE MIR 185 262 0 428 323 41 95 chr17 24412250 24412712 -61025768 + L2 LINE L2 2828 3264 -8 2057 136 3 3 chr17 24413643 24413944 -61024536 + AluSx SINE Alu 1 301 -11 353 331 54 0 chr17 24414222 24414406 -61024074 + MIR SINE MIR 34 227 -35 238 269 59 76 chr17 24414537 24414775 -61023705 - L2 LINE L2 -219 3053 2820 362 328 100 30 chr17 24415554 24415571 -61022909 - L1ME4a LINE L1 -30 6091 6077 1975 169 0 3 chr17 24415571 24415884 -61022596 + AluJo SINE Alu 1 312 0 362 328 100 30 chr17 24415884 24416165 -61022315 - L1ME4a LINE L1 -44 6077 5772 376 288 50 31 chr17 24416250 24416410 -61022070 + MIR SINE MIR 53 215 -47 904 166 20 0 chr17 24416496 24416647 -61021833 - MER2 DNA MER2_type 0 345 192 2263 162 22 36 chr17 24416650 24416872 -61021608 - Tigger2a DNA MER2_type -2274 434 219 885 26 188 0 chr17 24416872 24416989 -61021491 + MER85 DNA T2_type 1 139 0 2263 162 22 36 chr17 24416989 24417179 -61021301 - Tigger2a DNA MER2_type -2489 219 28 991 172 6 0 chr17 24417191 24417365 -61021115 - MER2 DNA MER2_type -155 190 16 332 247 151 64 chr17 24417475 24417694 -61020786 + MIR SINE MIR 12 249 -13 2147 105 6 35 chr17 24417895 24418208 -61020272 + AluSq SINE Alu 1 304 -9 233 201 28 35 chr17 24418416 24418561 -61019919 + CT-rich Low_complexity Low_complexity 1 144 0 338 264 120 24 chr17 24418673 24418798 -61019682 - LTR33A LTR ERVL -2 521 385 526 258 217 10 chr17 24419186 24419384 -61019096 + MIR SINE MIR 6 244 -18 1054 229 95 20 chr17 24419673 24420024 -61018456 - L1MD2 LINE L1 -17 6149 5791 1604 162 25 11 chr17 24420146 24420424 -61018056 + AluJo SINE Alu 1 282 -30 536 157 20 177 chr17 24420980 24421127 -61017353 + FLAM_C SINE Alu 2 125 -18 571 242 30 4 chr17 24421352 24421495 -61016985 + MLT1H1 LTR MaLR 16 171 -378 2153 185 61 18 chr17 24421523 24422024 -61016456 + LTR27 LTR ERV1 3 501 0 865 219 62 33 chr17 24422061 24422376 -61016104 + MLT1H1 LTR MaLR 205 554 -1 4208 147 71 20 chr17 24422729 24423473 -61015007 + LTR39 LTR ERV1 2 783 0 260 304 11 0 chr17 24423508 24423600 -61014880 - MIR SINE MIR -14 248 156 186 221 195 0 chr17 24424049 24424126 -61014354 + MIR SINE MIR 84 175 -87 1789 164 11 0 chr17 24424238 24424525 -61013955 + AluJb SINE Alu 1 290 -22 4563 157 23 24 chr17 24424676 24425538 -61012942 - L1MB7 LINE L1 -16 6168 5308 423 38 0 0 chr17 24426055 24426108 -61012372 + (TG)n Simple_repeat Simple_repeat 1 53 0 210 147 0 0 chr17 24426340 24426374 -61012106 + (TGAA)n Simple_repeat Simple_repeat 1 34 0 191 152 87 0 chr17 24426475 24426521 -61011959 + L2 LINE L2 3134 3183 -89 455 175 61 26 chr17 24426525 24426639 -61011841 - L2 LINE L2 -4 3268 3151 2298 52 24 21 chr17 24426730 24427020 -61011460 - AluY SINE Alu -20 291 1 207 257 151 22 chr17 24427882 24428061 -61010419 + L2 LINE L2 2776 2977 -337 2418 103 0 0 chr17 24428838 24429150 -61009330 + AluSx SINE Alu 1 312 0 378 235 39 20 chr17 24429272 24429374 -61009106 - MIR SINE MIR -131 131 28 195 234 0 64 chr17 24430969 24431016 -61007464 - MIR SINE MIR -198 64 21 210 254 0 0 chr17 24431103 24431162 -61007318 + A-rich Low_complexity Low_complexity 1 59 0 209 257 177 35 chr17 24432346 24432459 -61006021 - MIR SINE MIR -20 242 114 2261 88 7 0 chr17 24432879 24433186 -61005294 + AluSp SINE Alu 3 311 -2 1460 176 49 189 chr17 24433398 24433734 -61004746 - L1MD3 LINE L1 0 8042 7661 790 126 9 0 chr17 24433734 24433845 -61004635 - AluJ SINE Alu -18 294 183 750 175 33 0 chr17 24433853 24433973 -61004507 - AluJ SINE Alu -176 126 3 1460 176 49 189 chr17 24433973 24434235 -61004245 - L1MD3 LINE L1 -388 7654 7438 412 248 183 26 chr17 24435059 24435212 -61003268 + MER5A DNA MER1_type 10 186 -3 1671 148 78 0 chr17 24435310 24435594 -61002886 + AluSx SINE Alu 1 306 -6 565 198 19 0 chr17 24435643 24435749 -61002731 - MIR SINE MIR -126 136 29 315 0 0 0 chr17 24435756 24435791 -61002689 + (A)n Simple_repeat Simple_repeat 1 35 0 737 263 106 28 chr17 24435796 24436051 -61002429 - L1ME1 LINE L1 -7 6159 5885 325 268 99 0 chr17 24436347 24436489 -61001991 + L2 LINE L2 2899 3054 -218 186 269 115 0 chr17 24436679 24436731 -61001749 - MIR SINE MIR -60 148 91 605 294 167 46 chr17 24436967 24437349 -61001131 + MLT1K LTR MaLR 2 465 -123 1744 146 36 7 chr17 24437349 24437651 -61000829 + AluJo SINE Alu 1 311 -1 605 294 167 46 chr17 24437651 24437789 -61000691 + MLT1K LTR MaLR 465 585 -3 293 281 67 94 chr17 24438389 24438557 -60999923 + L2 LINE L2 2348 2519 -795 2401 78 13 0 chr17 24438557 24438866 -60999614 - AluSp SINE Alu 0 313 1 293 281 67 94 chr17 24438866 24439103 -60999377 + L2 LINE L2 2519 2742 -572 210 304 20 10 chr17 24439383 24439485 -60998995 + L2 LINE L2 2765 2867 -447 1458 172 59 92 chr17 24439583 24439634 -60998846 - MLT2D LTR ERVL 0 414 363 414 0 0 0 chr17 24439634 24439680 -60998800 + (TG)n Simple_repeat Simple_repeat 2 47 0 1458 172 59 92 chr17 24439680 24440053 -60998427 - MLT2D LTR ERVL -51 363 4 441 295 13 6 chr17 24440426 24440582 -60997898 + L1MC4 LINE L1 7793 7949 -93 407 304 129 51 chr17 24440660 24441193 -60997287 - L3 LINE CR1 -63 1514 940 2094 108 16 0 chr17 24441217 24441523 -60996957 - AluSq SINE Alu -2 311 1 888 244 53 5 chr17 24441872 24442081 -60996399 - MIR SINE MIR -31 231 13 372 297 306 0 chr17 24442072 24442301 -60996179 - L3 LINE CR1 -874 703 405 * 730 256 47 51 chr17 24443192 24443426 -60995054 + MIR SINE MIR 28 260 -2 774 303 18 5 chr17 24443622 24443843 -60994637 + MIR SINE MIR 21 244 -18 1713 183 10 3 chr17 24443848 24444149 -60994331 - AluJb SINE Alu -8 304 2 1645 163 31 25 chr17 24444421 24444747 -60993733 + L1MB8 LINE L1 5850 6177 -1 23 33 0 0 chr17 24445178 24445208 -60993272 + GC_rich Low_complexity Low_complexity 1 30 0 204 125 0 0 chr17 24446124 24446156 -60992324 + (T)n Simple_repeat Simple_repeat 1 32 0 252 242 32 21 chr17 24448530 24448625 -60989855 + GA-rich Low_complexity Low_complexity 3 98 0 194 263 18 18 chr17 24448792 24448849 -60989631 - L2 LINE L2 -9 3263 3207 * 255 307 195 12 chr17 24448843 24449084 -60989396 + L2 LINE L2 2606 2890 -424 1084 239 91 69 chr17 24449269 24449374 -60989106 - LTR16C LTR ERVL -6 485 384 1902 138 22 16 chr17 24449374 24449685 -60988795 + AluSq SINE Alu 1 313 0 1084 239 91 69 chr17 24449685 24450007 -60988473 - LTR16C LTR ERVL -107 384 12 241 258 0 15 chr17 24450017 24450083 -60988397 + (CATATA)n Simple_repeat Simple_repeat 5 69 0 646 255 121 15 chr17 24450171 24450493 -60987987 + L2 LINE L2 1012 1424 -1890 1648 110 4 0 chr17 24450569 24450806 -60987674 + AluSp SINE Alu 1 238 -75 696 92 0 0 chr17 24450811 24450909 -60987571 + AluSp/q SINE Alu 212 309 -4 264 333 31 0 chr17 24450913 24451042 -60987438 + L2 LINE L2 1545 1677 -1637 454 239 167 0 chr17 24451053 24451209 -60987271 + MER5A DNA MER1_type 4 189 0 398 321 194 17 chr17 24451340 24451633 -60986847 - L2 LINE L2 0 3313 2969 366 282 39 32 chr17 24451613 24451769 -60986711 + L2 LINE L2 1785 1941 -1373 * 1611 182 0 16 chr17 24451854 24452161 -60986319 + AluJb SINE Alu 1 302 -10 2239 110 0 0 chr17 24452163 24452471 -60986009 + AluSg SINE Alu 1 308 -2 7880 19 0 0 chr17 24452592 24453722 -60984758 - L1PA2 LINE L1 -6 6149 5020 4054 26 0 0 chr17 24453722 24454190 -60984290 + L1PA2 LINE L1 4535 5002 -1144 349 276 0 11 chr17 24454541 24454628 -60983852 - Tigger8 DNA MER2_type -550 116 31 1808 140 40 0 chr17 24454686 24455014 -60983466 - AluSx SINE Alu 0 340 1 1008 191 46 66 chr17 24455306 24455500 -60982980 + MER58B DNA MER1_type 106 296 -2124 2018 127 7 0 chr17 24455500 24455807 -60982673 + AluSx SINE Alu 1 309 -3 1008 191 46 66 chr17 24455807 24455853 -60982627 + MER58B DNA MER1_type 296 341 0 183 327 168 18 chr17 24459662 24459775 -60978705 - L2 LINE L2 -4 3268 3139 316 235 52 66 chr17 24459920 24460003 -60978477 - MIR SINE MIR -7 255 173 4174 107 28 28 chr17 24460003 24460445 -60978035 + MER41B LTR ERV1 1 445 -190 2009 129 3 0 chr17 24460445 24460739 -60977741 + AluSx SINE Alu 9 303 -9 4174 107 28 28 chr17 24460739 24460931 -60977549 + MER41B LTR ERV1 444 635 0 316 235 52 66 chr17 24460931 24460983 -60977497 - MIR SINE MIR -89 173 122 2025 99 0 3 chr17 24460984 24461293 -60977187 + AluSc SINE Alu 1 308 0 737 258 85 88 chr17 24461377 24461557 -60976923 + MLT1J LTR MaLR 25 204 -307 1455 175 40 15 chr17 24461557 24461831 -60976649 + AluJb SINE Alu 1 281 -31 237 98 0 0 chr17 24461836 24461877 -60976603 + (CAAA)n Simple_repeat Simple_repeat 2 42 0 737 258 85 88 chr17 24461877 24462135 -60976345 + MLT1J LTR MaLR 208 468 -43 390 229 108 0 chr17 24462248 24462331 -60976149 - L2 LINE L2 -19 3294 3203 2010 68 64 0 chr17 24462790 24463077 -60975403 - AluSc SINE Alu 0 304 1 503 280 106 26 chr17 24463194 24463383 -60975097 + MIR SINE MIR 30 233 -29 2261 86 0 3 chr17 24463387 24463690 -60974790 - AluSq SINE Alu -11 302 1 4905 18 7 0 chr17 24464065 24464621 -60973859 - L1PA3 LINE L1 0 6155 5596 507 17 0 0 chr17 24464700 24464760 -60973720 + (CA)n Simple_repeat Simple_repeat 1 60 0 313 273 153 7 chr17 24464787 24464937 -60973543 + L2 LINE L2 2435 2606 -708 425 221 214 7 chr17 24464951 24465096 -60973384 + MER5A DNA MER1_type 9 183 -6 1507 124 4 4 chr17 24465204 24465430 -60973050 - AluSx SINE Alu -86 226 1 418 293 94 50 chr17 24465441 24465738 -60972742 - L1MEd LINE L1 -5567 552 243 2120 81 3 3 chr17 24465917 24466228 -60972252 - AluSp SINE Alu 0 311 1 288 368 14 7 chr17 24466333 24466477 -60972003 + L2 LINE L2 2683 2827 -487 615 175 23 128 chr17 24466567 24466635 -60971845 + Charlie5 DNA MER1_type 2356 2430 -155 1707 161 0 23 chr17 24466635 24466934 -60971546 - AluJo SINE Alu -20 292 1 615 175 23 128 chr17 24466934 24467003 -60971477 + Charlie5 DNA MER1_type 2430 2505 -80 2192 107 0 3 chr17 24467003 24467311 -60971169 - AluSg SINE Alu -3 307 1 615 175 23 128 chr17 24467311 24467334 -60971146 + Charlie5 DNA MER1_type 2505 2529 -56 750 157 16 0 chr17 24467334 24467455 -60971025 + FLAM_A SINE Alu 2 124 -9 615 175 23 128 chr17 24467455 24467549 -60970931 + Charlie5 DNA MER1_type 2529 2585 0 589 299 26 26 chr17 24468036 24468230 -60970250 + MIR SINE MIR 68 261 -1 846 173 0 0 chr17 24468487 24468620 -60969860 + FLAM_C SINE Alu 1 133 0 1923 108 56 95 chr17 24468640 24469030 -60969450 - THE1C LTR MaLR 0 375 1 834 197 0 0 chr17 24469036 24469188 -60969292 + AluJb SINE Alu 144 295 -17 324 165 29 107 chr17 24469328 24469431 -60969049 + LTR67 LTR ERVL 461 555 -2 277 154 19 0 chr17 24469686 24469738 -60968742 + MIR SINE MIR 80 132 -130 186 103 0 0 chr17 24469744 24469773 -60968707 + (CA)n Simple_repeat Simple_repeat 2 30 0 2160 96 0 0 chr17 24469773 24470065 -60968415 - AluSc SINE Alu -17 292 1 343 183 0 0 chr17 24470079 24470139 -60968341 - MLT2C1 LTR ERVL -51 346 287 * 440 203 42 70 chr17 24470089 24470232 -60968248 - MLT1E3 LTR MaLR -421 203 65 * 847 151 0 7 chr17 24470136 24470275 -60968205 - MLT2C1 LTR ERVL -259 138 1 260 263 105 11 chr17 24470275 24470370 -60968110 + MIR SINE MIR 143 246 -16 595 215 77 82 chr17 24470437 24470632 -60967848 - MIR SINE MIR -1 261 68 1988 134 0 28 chr17 24471480 24471616 -60966864 + AluJb SINE Alu 1 139 -173 2159 97 13 6 chr17 24471616 24471927 -60966553 + AluSq SINE Alu 1 313 0 1988 134 0 28 chr17 24471927 24472111 -60966369 + AluJb SINE Alu 139 312 0 1260 258 70 38 chr17 24473241 24473613 -60964867 + LTR16C LTR ERVL 73 456 -35 221 328 0 0 chr17 24473636 24473703 -60964777 + L2 LINE L2 2638 2704 -610 324 0 0 0 chr17 24473703 24473739 -60964741 + (TTTA)n Simple_repeat Simple_repeat 4 39 0 833 134 0 0 chr17 24473750 24473869 -60964611 - FLAM_C SINE Alu -24 119 1 925 300 160 10 chr17 24473871 24474397 -60964083 + L2 LINE L2 2689 3313 0 581 361 91 12 chr17 24474394 24474823 -60963657 - L2 LINE L2 -698 2616 2154 * 499 323 112 36 chr17 24475058 24475414 -60963066 - L2 LINE L2 -1174 2140 1758 280 198 111 12 chr17 24475420 24475501 -60962979 + L1ME3 LINE L1 5620 5708 -454 2014 113 0 7 chr17 24475501 24475829 -60962651 - AluSx SINE Alu 0 328 3 1056 135 6 12 chr17 24475834 24476047 -60962433 - AluSg/x SINE Alu 0 337 126 546 168 0 107 chr17 24476061 24476180 -60962300 + L1ME3 LINE L1 6028 6129 -33 2217 104 0 0 chr17 24476180 24476477 -60962003 + AluSp SINE Alu 1 297 -16 546 168 0 107 chr17 24476477 24476506 -60961974 + L1ME3 LINE L1 6129 6160 -2 561 128 0 0 chr17 24476519 24476597 -60961883 + AluS SINE Alu 2 79 -233 2439 55 7 0 chr17 24476604 24476913 -60961567 - AluSp SINE Alu -2 311 1 1738 109 0 4 chr17 24476913 24477160 -60961320 + AluSg SINE Alu 64 310 0 1994 220 65 33 chr17 24477318 24477356 -60961124 + L1MC4 LINE L1 7288 7323 -719 1795 168 7 0 chr17 24477356 24477654 -60960826 - AluJo SINE Alu -12 300 1 1994 220 65 33 chr17 24477654 24477910 -60960570 + L1MC4 LINE L1 7323 7569 -473 2141 110 0 3 chr17 24477910 24478209 -60960271 + AluSg SINE Alu 1 298 -12 1994 220 65 33 chr17 24478209 24478486 -60959994 + L1MC4 LINE L1 7569 7878 -164 696 148 0 0 chr17 24478486 24478594 -60959886 - FLAM_A SINE Alu -15 127 20 656 168 64 69 chr17 24478596 24478769 -60959711 + L1MC4 LINE L1 7871 8042 0 1692 160 14 3 chr17 24478793 24479086 -60959394 + AluJb SINE Alu 3 298 -14 22 0 0 0 chr17 24479136 24479158 -60959322 + AT_rich Low_complexity Low_complexity 1 22 0 333 0 0 0 chr17 24479406 24479443 -60959037 + (CA)n Simple_repeat Simple_repeat 2 38 0 713 332 4 27 chr17 24479497 24479753 -60958727 + MIR SINE MIR 1 250 -12 378 259 53 38 chr17 24479876 24480007 -60958473 - MIR SINE MIR -57 205 73 1623 114 9 0 chr17 24480025 24480253 -60958227 - MER30 DNA MER1_type 0 230 1 2099 102 60 0 chr17 24480806 24481090 -60957390 - AluSg SINE Alu -7 303 3 257 50 0 25 chr17 24481465 24481505 -60956975 + (TTGG)n Simple_repeat Simple_repeat 2 40 0 281 324 49 0 chr17 24481574 24481676 -60956804 + MIR3 SINE MIR 85 191 -17 591 193 36 50 chr17 24482359 24482499 -60955981 - LTR67 LTR ERVL -2 555 418 195 280 89 116 chr17 24482771 24482872 -60955608 - MIR SINE MIR -6 256 154 1655 176 6 43 chr17 24482872 24483196 -60955284 - AluJo SINE Alu 0 312 1 195 280 89 116 chr17 24483196 24483256 -60955224 - MIR SINE MIR -108 154 100 2288 172 80 11 chr17 24483256 24483693 -60954787 + MLT1C LTR MaLR 1 467 0 195 280 89 116 chr17 24483693 24483755 -60954725 - MIR SINE MIR -162 100 38 506 301 96 4 chr17 24483865 24484104 -60954376 - L2 LINE L2 -925 2389 2129 833 274 112 47 chr17 24484105 24484425 -60954055 + MLT1J LTR MaLR 2 361 -150 2293 143 58 15 chr17 24484425 24484837 -60953643 - MSTB1 LTR MaLR 0 432 3 833 274 112 47 chr17 24484837 24484962 -60953518 + MLT1J LTR MaLR 361 476 -35 1331 186 47 99 chr17 24485387 24485769 -60952711 - MLT1A1 LTR MaLR -1 364 3 5587 67 12 0 chr17 24485854 24486537 -60951943 - LTR8 LTR ERV1 0 691 1 252 276 23 23 chr17 24486586 24486673 -60951807 + MLT1K LTR MaLR 502 588 0 415 329 179 24 chr17 24486675 24486935 -60951545 - L2 LINE L2 -1253 2061 1843 186 43 0 0 chr17 24486935 24486958 -60951522 + (GGAAA)n Simple_repeat Simple_repeat 1 23 0 415 329 179 24 chr17 24486958 24487620 -60950860 - L2 LINE L2 -1471 1843 996 2269 48 17 17 chr17 24488090 24488409 -60950071 + AluY SINE Alu 1 311 0 969 123 0 0 chr17 24488793 24488931 -60949549 - AluJo SINE Alu -39 273 136 4128 113 38 13 chr17 24488937 24489565 -60948915 + LTR9B LTR ERV1 1 644 0 1963 74 4 4 chr17 24489932 24490175 -60948305 - AluSp SINE Alu -70 243 1 354 239 0 11 chr17 24490269 24490357 -60948123 - MLT1K LTR MaLR 0 588 502 217 225 0 0 chr17 24490358 24490398 -60948082 - L2 LINE L2 -9 3304 3265 1253 178 29 29 chr17 24490872 24491113 -60947367 + MIR SINE MIR 10 250 -12 201 39 0 0 chr17 24493947 24493973 -60944507 + (TG)n Simple_repeat Simple_repeat 2 27 0 1793 226 48 12 chr17 24494332 24494850 -60943630 + MLT1F LTR MaLR 1 533 -9 499 259 108 0 chr17 24494857 24494996 -60943484 - MIR SINE MIR 0 262 109 1286 217 74 50 chr17 24495031 24495409 -60943071 + LTR16A1 LTR ERVL 68 454 -3 246 263 145 0 chr17 24495417 24495437 -60943043 - MIR SINE MIR -158 104 88 1607 186 117 17 chr17 24495437 24495797 -60942683 + MSTD LTR MaLR 1 396 0 246 263 145 0 chr17 24495797 24495852 -60942628 - MIR SINE MIR -174 88 18 1649 130 8 42 chr17 24495882 24496144 -60942336 - AluJo SINE Alu -59 253 1 1628 211 23 46 chr17 24496412 24496847 -60941633 + MLT1C LTR MaLR 43 467 0 286 214 14 57 chr17 24496931 24497001 -60941479 - AluJo SINE Alu -141 161 95 288 77 0 0 chr17 24497039 24497078 -60941402 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 206 254 61 97 chr17 24497078 24497137 -60941343 - MIR SINE MIR -69 139 84 2200 132 15 26 chr17 24497137 24497478 -60941002 - MER1B DNA MER1_type 0 337 1 206 254 61 97 chr17 24497478 24497532 -60940948 - MIR SINE MIR -124 84 30 348 202 36 24 chr17 24498516 24498600 -60939880 + L2 LINE L2 3183 3267 -5 * 520 297 74 26 chr17 24498599 24498826 -60939654 + MIR SINE MIR 21 256 -6 3302 177 26 17 chr17 24499372 24500022 -60938458 + L1MB5 LINE L1 5519 6174 0 2402 43 30 27 chr17 24500103 24500403 -60938077 + AluY SINE Alu 1 301 -10 989 193 0 6 chr17 24500567 24500733 -60937747 - AluJb SINE Alu -15 297 133 2281 114 3 0 chr17 24500737 24501034 -60937446 - AluSx SINE Alu -12 300 3 315 287 69 0 chr17 24501038 24501139 -60937341 + MER5A DNA MER1_type 52 159 -30 202 227 0 23 chr17 24501572 24501616 -60936864 - MIR SINE MIR -3 259 217 * 205 231 0 0 chr17 24501585 24501624 -60936856 - L2 LINE L2 -21 3292 3254 1283 92 0 0 chr17 24501647 24501810 -60936670 - AluSc SINE Alu -5 304 142 256 254 263 34 chr17 24501826 24501944 -60936536 - MIR SINE MIR -98 164 20 1996 149 0 17 chr17 24502115 24502417 -60936063 + AluJb SINE Alu 1 297 -15 326 157 0 0 chr17 24502494 24502571 -60935909 + AluSp/q SINE Alu 235 311 0 310 222 89 33 chr17 24502690 24502780 -60935700 + MIR SINE MIR 2 96 -166 305 298 105 26 chr17 24503427 24503541 -60934939 - MIR SINE MIR -8 254 132 643 278 126 9 chr17 24503549 24503779 -60934701 - MIR SINE MIR -4 258 2 421 307 103 35 chr17 24504443 24504870 -60933610 - L2 LINE L2 -47 3266 2811 1763 148 14 24 chr17 24505057 24505347 -60933133 + AluJb SINE Alu 12 298 -14 194 294 50 69 chr17 24505422 24505640 -60932840 + L2 LINE L2 2848 3061 -211 264 345 11 11 chr17 24505778 24505865 -60932615 + MIR SINE MIR 43 129 -79 602 259 39 15 chr17 24505865 24506070 -60932410 - LTR16C LTR ERVL -9 482 273 752 201 41 24 chr17 24506073 24506242 -60932238 - MER5B DNA MER1_type -6 172 1 431 232 42 0 chr17 24506242 24506337 -60932143 - LTR16C LTR ERVL -208 283 185 223 306 216 0 chr17 24506478 24506589 -60931891 + MIR SINE MIR 125 259 -3 185 339 0 46 chr17 24506606 24506671 -60931809 + L2 LINE L2 3235 3296 -17 862 144 7 33 chr17 24506803 24506956 -60931524 - MER5B DNA MER1_type -6 172 24 231 354 31 10 chr17 24507257 24507353 -60931127 - L2 LINE L2 -6 3266 3169 2393 101 0 0 chr17 24507520 24507818 -60930662 - AluSg SINE Alu -12 298 1 765 244 120 22 chr17 24507932 24508157 -60930323 - MIR SINE MIR 0 262 16 332 285 70 51 chr17 24609121 24609279 -60829201 - L1ME4a LINE L1 -2 6119 5959 713 286 101 48 chr17 24609297 24609752 -60828728 - L1ME4a LINE L1 -205 5916 5438 216 0 0 0 chr17 24609920 24609944 -60828536 + (TTTTA)n Simple_repeat Simple_repeat 4 27 0 2367 71 14 0 chr17 24609948 24610228 -60828252 - AluSp SINE Alu -29 284 1 289 247 50 24 chr17 24610387 24610504 -60827976 + MIR3 SINE MIR 72 193 -15 1094 255 185 17 chr17 24610600 24611134 -60827346 - L2 LINE L2 -5 3308 2692 417 240 53 60 chr17 24611750 24611900 -60826580 + L2 LINE L2 3164 3312 -1 2109 141 0 6 chr17 24612182 24612494 -60825986 - AluJb SINE Alu 0 312 3 452 204 142 40 chr17 24612521 24612717 -60825763 - MIR SINE MIR -51 211 2 369 298 92 8 chr17 24612783 24612914 -60825566 + MIR SINE MIR 118 259 -3 180 176 0 0 chr17 24615203 24615237 -60823243 + CT-rich Low_complexity Low_complexity 2 35 0 1837 150 7 7 chr17 24615327 24615613 -60822867 - AluJb SINE Alu -26 286 1 1270 281 41 18 chr17 24616069 24616561 -60821919 - MLT1D LTR MaLR 0 505 3 428 247 107 49 chr17 24616563 24616725 -60821755 - MIR SINE MIR -80 182 10 181 298 106 11 chr17 24616842 24616936 -60821544 - L3b LINE CR1 -134 1449 1347 403 264 66 8 chr17 24617466 24617587 -60820893 - MIR SINE MIR -86 176 49 182 121 61 0 chr17 24617612 24617645 -60820835 + MIR SINE MIR 40 74 -134 234 330 133 6 chr17 24618048 24618221 -60820259 - MIR SINE MIR -36 226 32 336 320 160 5 chr17 24618357 24618557 -60819923 - MIR SINE MIR -2 260 30 1929 168 0 3 chr17 24619151 24619448 -60819032 + AluJo SINE Alu 1 296 -16 194 244 0 0 chr17 24620451 24620492 -60817988 + MIR SINE MIR 62 102 -106 378 236 111 14 chr17 24621752 24621896 -60816584 + MIR SINE MIR 28 185 -77 458 200 296 0 chr17 24621967 24622092 -60816388 + MER5A DNA MER1_type 22 183 -6 1939 189 41 67 chr17 24623601 24624066 -60814414 + MER21B LTR ERV1 13 465 -398 597 126 0 0 chr17 24624085 24624172 -60814308 + AluJ/FLAM SINE Alu 1 87 -225 2799 137 2 28 chr17 24624206 24624673 -60813807 + LTR24 LTR ERV1 13 467 0 495 209 75 66 chr17 24624673 24624925 -60813555 + MER21B LTR ERV1 475 802 -61 352 293 88 54 chr17 24624954 24625305 -60813175 + L2 LINE L2 2498 2860 -454 299 364 67 47 chr17 24625323 24625620 -60812860 + L2 LINE L2 2970 3272 0 493 318 30 56 chr17 24625633 24625750 -60812730 + MIR SINE MIR 3 122 -140 2015 124 3 46 chr17 24625750 24626073 -60812407 - AluJb SINE Alu 0 312 4 493 318 30 56 chr17 24626073 24626222 -60812258 + MIR SINE MIR 122 262 0 310 109 55 0 chr17 24626222 24626277 -60812203 + MIR SINE MIR 126 183 -79 260 325 20 33 chr17 24626625 24626776 -60811704 - MIR3 SINE MIR -57 151 3 2257 107 0 31 chr17 24626927 24627246 -60811234 + AluSc SINE Alu 1 309 0 747 118 0 76 chr17 24627316 24627460 -60811020 + FLAM_C SINE Alu 1 133 0 189 0 0 0 chr17 24627614 24627635 -60810845 + (T)n Simple_repeat Simple_repeat 1 21 0 271 298 71 0 chr17 24627648 24627732 -60810748 - L2 LINE L2 -27 3286 3197 809 147 55 133 chr17 24628043 24628261 -60810219 + MER63A DNA MER1_type 1 201 -9 360 327 13 32 chr17 24628311 24628467 -60810013 + MIR SINE MIR 2 154 -108 206 328 127 8 chr17 24628497 24628631 -60809849 + L2 LINE L2 2915 3064 -208 4578 116 8 23 chr17 24628633 24629360 -60809120 + MER4E LTR ERV1 1 716 -50 1958 118 59 7 chr17 24629467 24629739 -60808741 - AluJb SINE Alu -26 286 1 193 337 145 0 chr17 24629879 24629962 -60808518 - L2 LINE L2 0 3272 3178 22 0 0 0 chr17 24629964 24629986 -60808494 + AT_rich Low_complexity Low_complexity 1 22 0 679 230 152 17 chr17 24629986 24630216 -60808264 - MIR SINE MIR 0 262 2 311 216 54 41 chr17 24630251 24630355 -60808125 - MIR SINE MIR -42 220 113 1845 75 0 4 chr17 24630355 24630582 -60807898 + AluY SINE Alu 84 309 -2 311 216 54 41 chr17 24630582 24630593 -60807887 - MIR SINE MIR -149 113 104 230 236 0 0 chr17 24631400 24631455 -60807025 + L2 LINE L2 2244 2298 -1016 459 266 18 0 chr17 24631560 24631669 -60806811 - L2 LINE L2 -1 3312 3202 2034 136 33 0 chr17 24631820 24632121 -60806359 + AluSx SINE Alu 1 311 -1 265 260 50 20 chr17 24632137 24632237 -60806243 + L2 LINE L2 2662 2764 -550 1869 148 3 0 chr17 24632305 24632588 -60805892 + AluJb SINE Alu 2 285 -27 21 0 0 0 chr17 24632588 24632609 -60805871 + AT_rich Low_complexity Low_complexity 1 21 0 257 337 0 10 chr17 24632827 24632928 -60805552 + MIR SINE MIR 45 144 -64 258 138 75 138 chr17 24632935 24633015 -60805465 + L1ME2 LINE L1 6034 6108 -56 1756 147 0 51 chr17 24633019 24633331 -60805149 - AluJb SINE Alu -16 296 1 201 94 0 0 chr17 24634015 24634047 -60804433 + (CTGGGG)n Simple_repeat Simple_repeat 2 33 0 294 340 96 44 chr17 24635362 24635706 -60802774 + L2 LINE L2 2902 3263 -9 2151 120 0 0 chr17 24635951 24636251 -60802229 - AluSx SINE Alu -12 300 1 642 195 0 18 chr17 24636502 24636615 -60801865 + FLAM_A SINE Alu 11 121 -21 247 206 14 41 chr17 24636705 24636778 -60801702 - MIR SINE MIR -70 138 68 544 346 119 14 chr17 24636878 24637537 -60800943 + L2 LINE L2 2235 3106 -166 762 273 28 36 chr17 24638378 24638631 -60799849 + MIR SINE MIR 2 252 -10 522 302 126 34 chr17 24638720 24639078 -60799402 - L2 LINE L2 0 3272 2882 466 159 106 98 chr17 24639122 24639254 -60799226 + FLAM_C SINE Alu 1 133 0 201 74 0 0 chr17 24639271 24639298 -60799182 + (A)n Simple_repeat Simple_repeat 1 27 0 403 243 48 5 chr17 24639310 24639499 -60798981 + L1ME LINE L1 5255 5451 -908 224 290 194 21 chr17 24639499 24639685 -60798795 + L2 LINE L2 2959 3176 -137 2497 65 0 0 chr17 24639733 24640043 -60798437 + AluY SINE Alu 1 310 -1 245 323 20 20 chr17 24640257 24640356 -60798124 + L1ME LINE L1 5643 5741 -380 1283 141 13 22 chr17 24640472 24640724 -60797756 + AluJo SINE Alu 87 336 0 369 351 93 25 chr17 24640922 24641274 -60797206 - L2 LINE L2 -272 3000 2625 2162 110 0 0 chr17 24641345 24641637 -60796843 + AluSx SINE Alu 1 292 -20 1233 177 0 56 chr17 24641786 24642035 -60796445 - AluJo SINE Alu -77 235 1 512 254 15 15 chr17 24642038 24642172 -60796308 - MIR SINE MIR -113 149 16 2200 117 0 3 chr17 24642253 24642562 -60795918 + AluSx SINE Alu 1 308 -4 894 162 0 0 chr17 24642573 24642715 -60795765 + FLAM_C SINE Alu 1 142 -1 1890 130 9 48 chr17 24642750 24643066 -60795414 - AluSx SINE Alu -8 304 1 328 280 80 8 chr17 24643068 24643193 -60795287 - MIR SINE MIR -55 153 20 750 145 0 83 chr17 24643509 24643654 -60794826 - FLAM_C SINE Alu -10 133 1 2144 94 10 3 chr17 24643728 24644027 -60794453 - AluSx SINE Alu -11 301 1 1843 151 20 0 chr17 24644344 24644642 -60793838 - AluJb SINE Alu -2 310 7 1273 108 187 42 chr17 24644792 24645033 -60793447 - AluSx SINE Alu -16 296 21 2082 85 3 50 chr17 24645039 24645357 -60793123 - AluSx SINE Alu -8 304 2 256 264 0 29 chr17 24646627 24646697 -60791783 + MIR SINE MIR 75 143 -67 25 31 0 0 chr17 24647035 24647067 -60791413 + GC_rich Low_complexity Low_complexity 1 32 0 256 255 85 0 chr17 24648079 24648173 -60790307 - MIR SINE MIR -77 185 84 201 250 54 0 chr17 24648361 24648417 -60790063 - MIR SINE MIR -57 151 93 300 305 51 0 chr17 24648698 24648816 -60789664 - MIR SINE MIR -48 214 91 213 288 45 0 chr17 24651133 24651199 -60787281 + MIR SINE MIR 35 103 -159 646 173 0 0 chr17 24652668 24652772 -60785708 + FRAM SINE Alu 66 169 -7 1545 178 4 22 chr17 24652788 24653064 -60785416 + AluJo SINE Alu 3 273 -39 2112 113 0 16 chr17 24653077 24653387 -60785093 + AluSg SINE Alu 1 305 -5 276 281 245 10 chr17 24656126 24656318 -60782162 + MIR SINE MIR 20 256 -6 1693 157 7 33 chr17 24656524 24656823 -60781657 - AluJb SINE Alu -21 291 1 896 150 0 0 chr17 24656827 24656960 -60781520 - AluSq/x SINE Alu -179 133 1 1962 114 37 7 chr17 24659080 24659379 -60779101 + AluSx SINE Alu 1 308 -4 1967 107 3 21 chr17 24659400 24659715 -60778765 - AluSq SINE Alu 0 310 1 463 299 98 11 chr17 24660849 24661023 -60777457 - MIR3 SINE MIR -18 190 2 205 316 82 41 chr17 24662896 24663092 -60775388 - L2 LINE L2 -13 3300 3097 2029 115 3 0 chr17 24663681 24664010 -60774470 - AluSp SINE Alu 0 330 1 408 327 215 8 chr17 24664342 24664602 -60773878 - L2 LINE L2 -1 3271 2958 1410 105 0 5 chr17 24665798 24665998 -60772482 - AluSc SINE Alu -13 296 98 2312 86 0 3 chr17 24666497 24666798 -60771682 + AluSx SINE Alu 1 300 -12 2047 135 0 3 chr17 24666801 24667105 -60771375 + AluSc SINE Alu 3 305 -4 355 232 117 40 chr17 24667196 24667329 -60771151 - MIR SINE MIR -69 139 3 189 242 97 0 chr17 24668103 24668165 -60770315 - L2 LINE L2 -65 3248 3181 468 267 56 28 chr17 24669027 24669207 -60769273 - MIR SINE MIR -77 185 1 334 329 100 0 chr17 24669443 24669613 -60768867 + MIR SINE MIR 2 188 -74 937 146 61 85 chr17 24669698 24669910 -60768570 - AluJo SINE Alu -20 292 86 2080 86 10 33 chr17 24670606 24670907 -60767573 - AluSp SINE Alu -11 302 9 342 326 124 0 chr17 24675217 24675410 -60763070 + MIR SINE MIR 22 238 -24 269 304 0 64 chr17 24675570 24675695 -60762785 + MIR SINE MIR 113 229 -33 23 0 0 0 chr17 24676162 24676185 -60762295 + AT_rich Low_complexity Low_complexity 1 23 0 1047 164 0 0 chr17 24676223 24676394 -60762086 - AluJb SINE Alu -92 220 50 494 305 7 19 chr17 24676510 24676664 -60761816 - MIR SINE MIR -108 154 3 1832 170 0 3 chr17 24678291 24678603 -60759877 + AluJb SINE Alu 1 311 -1 1994 140 0 22 chr17 24680072 24680387 -60758093 - AluJb SINE Alu -4 308 1 653 173 9 0 chr17 24681071 24681181 -60757299 + FLAM_A SINE Alu 6 116 -26 627 237 211 23 chr17 24681342 24681650 -60756830 - L2 LINE L2 -19 3294 2929 1260 171 5 0 chr17 24681668 24681878 -60756602 + AluJo SINE Alu 1 211 -101 601 268 105 58 chr17 24681935 24682278 -60756202 - L2 LINE L2 -406 2908 2550 205 274 9 104 chr17 24682349 24682455 -60756025 + L2 LINE L2 3172 3267 -5 485 183 19 29 chr17 24684629 24684733 -60753747 - L2 LINE L2 -2 3270 3168 268 334 129 30 chr17 24684729 24685135 -60753345 + L2 LINE L2 2647 3094 -178 * 1891 164 3 0 chr17 24685387 24685686 -60752794 - AluJb SINE Alu -12 300 1 229 197 169 141 chr17 24685809 24685951 -60752529 + Charlie8 DNA MER1_type 36 181 -2236 315 0 0 0 chr17 24686228 24686263 -60752217 + (TG)n Simple_repeat Simple_repeat 2 36 0 235 365 34 20 chr17 24686441 24686589 -60751891 + L2 LINE L2 2861 3010 -262 488 238 56 14 chr17 24686923 24687066 -60751414 + L2 LINE L2 3122 3270 -2 208 206 96 14 chr17 24688068 24688141 -60750339 + MIR SINE MIR 65 143 -65 908 156 52 0 chr17 24688525 24688679 -60749801 - FAM SINE Alu -13 162 1 2109 133 0 19 chr17 24689080 24689251 -60749229 - AluSx SINE Alu -10 302 138 2476 69 10 0 chr17 24689251 24689556 -60748924 - AluSp SINE Alu -5 308 1 2109 133 0 19 chr17 24689556 24689692 -60748788 - AluSx SINE Alu -174 138 1 218 271 71 0 chr17 24689692 24689762 -60748718 - MIR SINE MIR -71 191 117 1768 141 20 46 chr17 24692065 24692371 -60746109 + AluJb SINE Alu 1 298 -14 215 245 41 0 chr17 24694152 24694201 -60744279 + L2 LINE L2 3222 3272 0 373 224 0 12 chr17 24695174 24695259 -60743221 + MIR3 SINE MIR 94 177 -31 1685 144 58 11 chr17 24695333 24695610 -60742870 - AluJb SINE Alu -22 290 1 2051 73 117 7 chr17 24695637 24695911 -60742569 + AluSx SINE Alu 1 304 -8 424 300 79 0 chr17 24696227 24696367 -60742113 + MIR SINE MIR 86 236 -26 2132 114 23 7 chr17 24696792 24697100 -60741380 + AluSq SINE Alu 1 313 0 417 20 0 0 chr17 24697485 24697535 -60740945 + (CA)n Simple_repeat Simple_repeat 1 50 0 1599 163 50 4 chr17 24697610 24697887 -60740593 + AluJo SINE Alu 2 291 -21 1950 154 133 26 chr17 24698269 24698722 -60739758 + MLT1D LTR MaLR 1 501 -4 1004 158 43 0 chr17 24700580 24700744 -60737736 + AluJo SINE Alu 2 172 -140 219 208 104 0 chr17 24702084 24702161 -60736319 - L2 LINE L2 -2509 805 721 1449 137 136 30 chr17 24702828 24702923 -60735557 + Tigger7 DNA MER2_type 228 311 -2176 1706 130 60 0 chr17 24702923 24703192 -60735288 + AluJo SINE Alu 1 285 -27 1449 137 136 30 chr17 24703192 24703542 -60734938 + Tigger7 DNA MER2_type 311 2479 -8 1863 153 28 0 chr17 24703602 24703890 -60734590 + AluSx SINE Alu 1 296 -16 2204 123 3 3 chr17 24703890 24704191 -60734289 + AluSx SINE Alu 1 301 -11 483 190 146 7 chr17 24704201 24704338 -60734142 - MIR3 SINE MIR -23 185 30 997 158 148 6 chr17 24704727 24704910 -60733570 + AluJo SINE Alu 85 293 -19 294 367 22 7 chr17 24705764 24705903 -60732577 + MIR3 SINE MIR 54 194 -14 488 256 53 0 chr17 24706147 24706280 -60732200 + L1MC1 LINE L1 5071 5210 -936 * 3021 166 22 20 chr17 24706273 24706829 -60731651 + L1MC1 LINE L1 5572 6128 -205 371 134 0 15 chr17 24706873 24706940 -60731540 + L1MC1 LINE L1 6264 6329 -4 604 149 79 0 chr17 24707457 24707571 -60730909 + FLAM_A SINE Alu 20 142 0 781 199 7 14 chr17 24707776 24707922 -60730558 + AluJb SINE Alu 119 263 -49 1835 56 0 0 chr17 24707946 24708159 -60730321 - AluY SINE Alu -13 298 86 974 227 44 31 chr17 24708208 24708529 -60729951 - L1M4 LINE L1 -1000 5146 4822 1406 177 57 32 chr17 24708958 24709087 -60729393 + AluJo SINE Alu 1 125 -187 1767 142 33 30 chr17 24709087 24709389 -60729091 + AluSx SINE Alu 1 303 -9 1406 177 57 32 chr17 24709389 24709542 -60728938 + AluJo SINE Alu 125 290 -22 1389 158 37 64 chr17 24709598 24709895 -60728585 - AluJo SINE Alu -18 294 6 21 0 0 0 chr17 24710177 24710198 -60728282 + AT_rich Low_complexity Low_complexity 1 21 0 208 135 0 0 chr17 24710250 24710287 -60728193 + (T)n Simple_repeat Simple_repeat 1 37 0 306 138 46 0 chr17 24710390 24710455 -60728025 - L1MB4 LINE L1 -1 6179 6112 557 143 29 9 chr17 24710471 24710576 -60727904 + FLAM_A SINE Alu 20 126 -16 453 135 11 56 chr17 24710576 24710665 -60727815 - L1MB3 LINE L1 -59 6124 6040 220 273 73 0 chr17 24710730 24710785 -60727695 - L2 LINE L2 -74 3198 3140 24 53 0 0 chr17 24710838 24710876 -60727604 + AT_rich Low_complexity Low_complexity 1 38 0 318 24 0 0 chr17 24711041 24711083 -60727397 - L1PA6 LINE L1 -2 6152 6111 398 127 0 16 chr17 24711554 24711617 -60726863 - LTR12 LTR ERV1 -631 83 22 5078 119 27 5 chr17 24711679 24712468 -60726012 + MER109 Unknown Unknown 1599 2404 -28 1958 152 0 3 chr17 24712616 24712912 -60725568 - AluJb SINE Alu -17 295 1 212 130 0 43 chr17 24713006 24713052 -60725428 + (CAAAAA)n Simple_repeat Simple_repeat 2 45 0 2029 144 10 0 chr17 24713635 24713940 -60724540 + AluSx SINE Alu 1 308 -4 2116 132 0 7 chr17 24714161 24714457 -60724023 + AluSq SINE Alu 1 294 -19 28 61 0 0 chr17 24714460 24714509 -60723971 + AT_rich Low_complexity Low_complexity 1 49 0 1961 109 47 4 chr17 24714994 24715304 -60723176 - AluSx SINE Alu 0 324 3 27 0 0 0 chr17 24716142 24716169 -60722311 + AT_rich Low_complexity Low_complexity 1 27 0 925 125 0 21 chr17 24716433 24716577 -60721903 - AluSg/x SINE Alu -2 308 168 387 0 0 0 chr17 24716863 24716906 -60721574 + (TG)n Simple_repeat Simple_repeat 2 44 0 2145 105 0 11 chr17 24716913 24717198 -60721282 - AluSx SINE Alu -30 282 1 26 0 0 0 chr17 24717259 24717285 -60721195 + AT_rich Low_complexity Low_complexity 1 26 0 23 33 0 0 chr17 24717338 24717368 -60721112 + AT_rich Low_complexity Low_complexity 1 30 0 620 114 9 44 chr17 24717398 24717512 -60720968 + AluJb SINE Alu 202 311 -1 2261 93 0 29 chr17 24717601 24717914 -60720566 + AluSg SINE Alu 1 304 -6 1579 118 141 15 chr17 24717926 24718196 -60720284 + AluSx SINE Alu 1 304 -8 2189 60 52 0 chr17 24719092 24719380 -60719100 - AluY SINE Alu 0 302 1 2056 101 42 3 chr17 24719698 24719984 -60718496 + AluSx SINE Alu 1 297 -15 192 77 0 0 chr17 24720437 24720463 -60718017 + (TA)n Simple_repeat Simple_repeat 2 27 0 1774 169 3 0 chr17 24720545 24720829 -60717651 + AluJb SINE Alu 14 298 -14 923 118 0 0 chr17 24721558 24721708 -60716772 - AluSg/x SINE Alu 0 308 159 425 189 11 0 chr17 24721708 24721803 -60716677 + (TA)n Simple_repeat Simple_repeat 1 96 0 2126 112 10 3 chr17 24722016 24722311 -60716169 - AluSx SINE Alu -15 297 1 23 0 0 0 chr17 24722976 24722999 -60715481 + AT_rich Low_complexity Low_complexity 1 23 0 820 145 0 51 chr17 24723659 24723797 -60714683 + FLAM_C SINE Alu 1 131 -12 2218 97 4 0 chr17 24724105 24724408 -60714072 - AluSg SINE Alu 0 304 1 1671 153 32 51 chr17 24724868 24725182 -60713298 + AluJb SINE Alu 1 308 -4 1908 130 13 23 chr17 24725389 24725689 -60712791 + AluJo SINE Alu 1 297 -15 566 97 11 21 chr17 24725701 24725794 -60712686 - L1MB2 LINE L1 -18 6153 6062 2248 122 0 3 chr17 24726109 24726420 -60712060 - AluSg SINE Alu 0 310 1 286 212 88 88 chr17 24728134 24728271 -60710209 + L1M1 LINE L1 4910 5046 -1100 940 73 81 0 chr17 24728362 24728486 -60709994 - MER85 DNA T2_type -5 134 1 1690 166 17 27 chr17 24728501 24728797 -60709683 + AluJo SINE Alu 1 293 -19 2306 105 0 7 chr17 24728992 24729296 -60709184 - AluSx SINE Alu -10 302 1 250 288 64 24 chr17 24729379 24729504 -60708976 + L1M1 LINE L1 5500 5629 -676 1681 171 17 10 chr17 24729504 24729796 -60708684 - AluJo SINE Alu -16 296 3 2316 92 3 0 chr17 24729809 24730104 -60708376 - AluSg SINE Alu -14 296 1 21 57 0 0 chr17 24730329 24730364 -60708116 + AT_rich Low_complexity Low_complexity 1 35 0 2964 3 0 0 chr17 24730595 24730906 -60707574 + AluYa5 SINE Alu 1 311 0 501 200 110 0 chr17 24731143 24731243 -60707237 - FLAM_C SINE Alu -12 131 21 1544 177 10 31 chr17 24731347 24731635 -60706845 + AluJo SINE Alu 1 282 -30 23 0 0 0 chr17 24731716 24731739 -60706741 + AT_rich Low_complexity Low_complexity 1 23 0 2207 122 3 3 chr17 24731800 24732111 -60706369 - AluSq SINE Alu -2 311 1 770 179 0 8 chr17 24732735 24732869 -60705611 + AluJo SINE Alu 2 134 -178 1332 234 66 0 chr17 24733049 24733322 -60705158 + AluJo SINE Alu 10 300 -12 2464 93 0 3 chr17 24733585 24733895 -60704585 - AluSq SINE Alu -4 309 1 2307 100 10 3 chr17 24733955 24734255 -60704225 + AluSg SINE Alu 1 302 -8 1604 184 0 17 chr17 24734264 24734552 -60703928 + AluJb SINE Alu 1 283 -29 324 0 0 0 chr17 24734552 24734588 -60703892 + (CA)n Simple_repeat Simple_repeat 2 37 0 382 319 109 24 chr17 24734639 24734849 -60703631 - MIR SINE MIR -11 251 24 1713 167 14 44 chr17 24734964 24735281 -60703199 + AluJb SINE Alu 1 308 0 373 252 214 44 chr17 24735662 24735868 -60702612 - MIR SINE MIR -13 249 9 195 290 84 84 chr17 24736345 24736388 -60702092 - L2 LINE L2 -8 3305 3263 1596 131 161 0 chr17 24736388 24736648 -60701832 + AluSg SINE Alu 1 302 -8 195 290 84 84 chr17 24736648 24736818 -60701662 - L2 LINE L2 -49 3264 3092 2085 95 56 0 chr17 24736843 24737128 -60701352 + AluSp SINE Alu 1 301 -12 216 239 69 138 chr17 24737954 24738013 -60700467 - MER5A DNA MER1_type -63 126 64 2049 143 0 0 chr17 24738013 24738300 -60700180 + AluSx SINE Alu 1 287 -25 216 239 69 138 chr17 24738300 24738370 -60700110 - MER5A DNA MER1_type -125 64 6 407 330 32 9 chr17 24738507 24738696 -60699784 - MIR3 SINE MIR -51 211 14 2430 109 0 0 chr17 24738968 24739280 -60699200 - AluSq SINE Alu 0 313 2 2145 135 3 6 chr17 24739337 24739648 -60698832 - AluSx SINE Alu -2 310 1 2329 71 4 4 chr17 24740150 24740468 -60698012 - AluY SINE Alu 0 318 1 348 232 203 6 chr17 24740468 24740664 -60697816 - L1M2 LINE L1 -561 5560 5321 261 0 0 0 chr17 24740665 24740694 -60697786 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 236 242 124 78 chr17 24740730 24740927 -60697553 - L1M4 LINE L1 -853 5293 5072 2313 118 0 9 chr17 24740927 24741242 -60697238 - AluSx SINE Alu 0 312 1 236 242 124 78 chr17 24741242 24741391 -60697089 - L1M4 LINE L1 -1074 5072 4931 2243 125 0 3 chr17 24741423 24741720 -60696760 - AluSg SINE Alu -14 296 1 180 0 0 0 chr17 24741735 24741755 -60696725 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 192 77 0 0 chr17 24743351 24743377 -60695103 + (A)n Simple_repeat Simple_repeat 1 26 0 2324 113 0 0 chr17 24745549 24745858 -60692622 - AluSx SINE Alu -3 309 1 4222 77 44 9 chr17 24746311 24746947 -60691533 - MER4E LTR ERV1 -108 658 1 3801 110 74 21 chr17 24754538 24755265 -60683215 + MER4A-int LTR ERV1 5831 6596 -2 499 111 89 0 chr17 24755273 24755363 -60683117 + MER4A LTR ERV1 1 98 -566 1356 154 16 94 chr17 24755416 24755734 -60682746 + MER4A LTR ERV1 372 664 0 26 30 0 0 chr17 24756247 24756280 -60682200 + AT_rich Low_complexity Low_complexity 1 33 0 2145 110 7 27 chr17 24756386 24756533 -60681947 + AluSq SINE Alu 1 140 -173 6062 130 20 31 chr17 24756533 24757616 -60680864 - MER11C LTR ERVK 0 1071 1 2145 110 7 27 chr17 24757616 24757767 -60680713 + AluSq SINE Alu 140 293 -20 935 189 17 6 chr17 24757844 24758024 -60680456 - Tigger3(Golem) DNA MER2_type -1 3028 2847 3280 82 24 9 chr17 24758025 24758478 -60680002 - LTR46 LTR ERV1 0 460 1 3158 123 22 36 chr17 24758478 24758603 -60679877 - LTR46-int LTR ERV1 0 6985 6860 2116 103 58 3 chr17 24758603 24758894 -60679586 - AluSq SINE Alu -2 311 5 3158 123 22 36 chr17 24758894 24759319 -60679161 - LTR46-int LTR ERV1 -125 6860 6443 351 193 2 30 chr17 24759319 24759397 -60679083 - AluJb SINE Alu -137 165 104 2214 116 0 0 chr17 24759528 24759845 -60678635 + AluSx SINE Alu 1 317 0 2651 58 14 8 chr17 24759845 24760206 -60678274 + L1PA8 LINE L1 5805 6167 -5 338 275 0 0 chr17 24760955 24761035 -60677445 + MLT1I LTR MaLR 98 177 -232 1969 171 0 0 chr17 24761050 24761355 -60677125 - AluJb SINE Alu -7 305 1 289 261 246 0 chr17 24761736 24761874 -60676606 - MIR SINE MIR -71 191 20 262 133 67 0 chr17 24761962 24762022 -60676458 + CT-rich Low_complexity Low_complexity 1 64 0 327 357 18 29 chr17 24762256 24762427 -60676053 + MER5A DNA MER1_type 7 186 -3 188 133 0 0 chr17 24762503 24762533 -60675947 + MIR SINE MIR 118 147 -115 193 125 21 21 chr17 24763413 24763461 -60675019 + CT-rich Low_complexity Low_complexity 1 48 0 276 313 62 0 chr17 24763478 24763590 -60674890 - L2 LINE L2 -15 3257 3139 1827 170 0 34 chr17 24764692 24764870 -60673610 - AluJb SINE Alu 0 312 148 2418 82 3 0 chr17 24764870 24765162 -60673318 - AluSp SINE Alu -20 293 1 1827 170 0 34 chr17 24765162 24765306 -60673174 - AluJb SINE Alu -164 148 1 432 295 48 36 chr17 24765401 24765620 -60672860 - MIR SINE MIR -11 251 18 725 254 34 99 chr17 24766746 24766941 -60671539 - L2 LINE L2 -2 3311 3105 1966 168 7 0 chr17 24766941 24767251 -60671229 + AluJo SINE Alu 1 312 0 725 254 34 99 chr17 24767251 24767312 -60671168 - L2 LINE L2 -208 3105 3042 660 148 0 30 chr17 24767312 24767447 -60671033 - FLAM_C SINE Alu -2 131 1 725 254 34 99 chr17 24767447 24767574 -60670906 - L2 LINE L2 -271 3042 2952 2929 13 0 0 chr17 24768130 24768440 -60670040 + AluYb8 SINE Alu 1 310 -8 1910 160 7 3 chr17 24769731 24770025 -60668455 + AluJo SINE Alu 1 295 -17 277 192 0 82 chr17 24770518 24770591 -60667889 - L3 LINE CR1 -116 1461 1395 252 100 0 0 chr17 24771583 24771623 -60666857 + (CTGGGG)n Simple_repeat Simple_repeat 1 40 0 344 203 28 126 chr17 24773408 24773551 -60664929 - MIR SINE MIR -118 144 16 293 313 12 0 chr17 24773589 24773672 -60664808 - MIR3 SINE MIR -51 157 74 449 273 0 41 chr17 24773953 24774074 -60664406 + MIR SINE MIR 30 145 -63 2294 103 10 3 chr17 24774151 24774451 -60664029 - AluSx SINE Alu -10 302 1 2029 130 10 51 chr17 24775008 24775050 -60663430 - THE1C LTR MaLR 0 375 333 2127 114 41 0 chr17 24775050 24775340 -60663140 + AluSx SINE Alu 1 302 -10 2029 130 10 51 chr17 24775340 24775688 -60662792 - THE1C LTR MaLR -42 333 1 1448 154 8 0 chr17 24775732 24775979 -60662501 + MER41B LTR ERV1 1 249 -386 963 94 31 0 chr17 24775984 24776111 -60662369 - AluSq/x SINE Alu -179 133 3 1760 147 3 14 chr17 24776112 24776383 -60662097 + MER41B LTR ERV1 237 506 -129 2246 129 3 0 chr17 24776383 24776692 -60661788 - AluSp SINE Alu -3 310 1 1760 147 3 14 chr17 24776692 24776713 -60661767 + MER41B LTR ERV1 506 526 -109 561 147 164 0 chr17 24776714 24776830 -60661650 - FLAM_C SINE Alu -7 136 2 724 142 8 0 chr17 24776836 24776956 -60661524 + MER41B LTR ERV1 514 634 -1 1246 163 163 19 chr17 24777426 24777683 -60660797 - AluJb SINE Alu -18 294 1 2307 109 0 13 chr17 24777690 24778001 -60660479 - AluSx SINE Alu -5 307 1 332 256 46 51 chr17 24778124 24778313 -60660167 - MIR3 SINE MIR -58 150 9 230 336 58 0 chr17 24779038 24779142 -60659338 + MIR3 SINE MIR 60 169 -39 27 0 0 0 chr17 24779272 24779299 -60659181 + AT_rich Low_complexity Low_complexity 1 27 0 301 277 90 2 chr17 24779323 24779449 -60659031 + MLT1J2 LTR MaLR 53 227 -284 616 182 52 57 chr17 24779453 24779630 -60658850 + MLT1H1 LTR MaLR 1 170 -420 1311 182 63 82 chr17 24779630 24780009 -60658471 + MLT1B LTR MaLR 1 372 -18 1657 224 39 32 chr17 24780098 24780504 -60657976 + LTR2 LTR ERV1 41 449 0 38821 56 4 8 chr17 24780504 24788333 -60650147 + HERVE LTR ERV1 1 7812 -1 1736 219 39 34 chr17 24788422 24788829 -60649651 + LTR2 LTR ERV1 41 449 0 742 247 136 54 chr17 24788861 24789213 -60649267 + MLT1H1 LTR MaLR 175 555 0 380 279 112 43 chr17 24789213 24789471 -60649009 + MLT1J LTR MaLR 227 502 -9 33 43 0 0 chr17 24789548 24789595 -60648885 + AT_rich Low_complexity Low_complexity 1 47 0 376 221 148 27 chr17 24789936 24790085 -60648395 - L2 LINE L2 -180 3092 2926 213 268 73 12 chr17 24792159 24792241 -60646239 + MIR SINE MIR 63 149 -113 183 250 0 0 chr17 24793459 24793491 -60644989 - L2 LINE L2 -17 3296 3265 252 188 238 0 chr17 24793508 24793588 -60644892 - MIR SINE MIR -82 180 82 224 295 26 13 chr17 24793965 24794043 -60644437 - L3b LINE CR1 -95 1488 1410 6210 66 5 61 chr17 24794045 24795056 -60643424 - SVA Other Other 0 1386 433 5180 76 28 56 chr17 24795073 24796243 -60642237 - SVA Other Other -518 868 57 504 45 0 0 chr17 24796243 24796310 -60642170 + (GGGAGA)n Simple_repeat Simple_repeat 1 67 0 240 143 0 0 chr17 24796338 24796373 -60642107 + MLT1B LTR MaLR 427 461 -6 807 215 42 37 chr17 24797887 24798037 -60640443 - L2 LINE L2 -6 3307 3154 2210 114 0 0 chr17 24798037 24798345 -60640135 + AluSx SINE Alu 1 308 -4 807 215 42 37 chr17 24798345 24798385 -60640095 - L2 LINE L2 -159 3154 3116 435 211 0 0 chr17 24798388 24798464 -60640016 + AluJ/FLAM SINE Alu 1 76 -236 921 204 35 81 chr17 24798670 24798954 -60639526 - MER58B DNA MER1_type 0 341 71 419 208 0 0 chr17 24798965 24799037 -60639443 - AluJ/FLAM SINE Alu -239 73 2 2024 122 7 0 chr17 24799047 24799343 -60639137 - AluSx SINE Alu -14 298 1 306 176 235 0 chr17 24799345 24799413 -60639067 - MER58B DNA MER1_type -257 84 1 21 0 0 0 chr17 24799527 24799548 -60638932 + AT_rich Low_complexity Low_complexity 1 21 0 2209 104 3 0 chr17 24800035 24800342 -60638138 - AluSp SINE Alu -5 308 1 439 280 85 44 chr17 24800760 24800970 -60637510 - MLT1J LTR MaLR -2 509 282 2239 104 0 0 chr17 24800970 24801278 -60637202 + AluSg SINE Alu 1 308 -2 439 280 85 44 chr17 24801278 24801360 -60637120 - MLT1J LTR MaLR -229 282 205 2010 117 11 0 chr17 24801503 24801784 -60636696 - AluSx SINE Alu -24 288 5 954 205 56 8 chr17 24801859 24802093 -60636387 - L1MA9 LINE L1 -38 6274 6030 808 206 0 40 chr17 24802080 24802279 -60636201 + L1MA9 LINE L1 5846 6036 -276 * 234 329 125 29 chr17 24802374 24802614 -60635866 + L2 LINE L2 2079 2341 -973 474 260 87 7 chr17 24802631 24802781 -60635699 - MIR SINE MIR 0 262 101 197 379 0 0 chr17 24802832 24802898 -60635582 + L2 LINE L2 2398 2463 -851 972 233 18 9 chr17 24803135 24803363 -60635117 + L2 LINE L2 3084 3313 0 217 294 0 0 chr17 24803395 24803446 -60635034 + (CA)n Simple_repeat Simple_repeat 2 52 0 634 224 133 0 chr17 24803652 24803817 -60634663 + MIR SINE MIR 12 198 -64 2186 115 0 0 chr17 24804078 24804383 -60634097 + AluSx SINE Alu 1 305 -7 516 184 39 0 chr17 24804610 24804713 -60633767 + FLAM_C SINE Alu 2 108 -35 363 44 0 0 chr17 24804713 24804758 -60633722 + (TG)n Simple_repeat Simple_repeat 2 46 0 998 162 5 30 chr17 24804921 24804933 -60633547 + L1M4 LINE L1 3561 3572 -2574 2250 97 7 3 chr17 24804933 24805242 -60633238 + AluSg SINE Alu 1 310 0 998 162 5 30 chr17 24805242 24805426 -60633054 + L1M4 LINE L1 3572 3752 -2394 436 138 0 0 chr17 24805428 24805493 -60632987 + AluJ/FLAM SINE Alu 2 66 -246 304 130 0 0 chr17 24805493 24805539 -60632941 + AluS SINE Alu 40 85 -218 1347 174 20 20 chr17 24805539 24805786 -60632694 - AluJo SINE Alu -50 262 16 612 221 26 87 chr17 24805812 24805884 -60632596 - L1M4 LINE L1 -2191 3955 3880 2074 121 0 0 chr17 24805884 24806181 -60632299 - AluSx SINE Alu -15 297 1 612 221 26 87 chr17 24806181 24806339 -60632141 - L1M4 LINE L1 -2266 3880 3739 874 154 32 0 chr17 24806343 24806499 -60631981 - AluSg/x SINE Alu 0 312 152 1715 159 0 10 chr17 24806533 24806828 -60631652 + AluJb SINE Alu 1 292 -20 450 246 0 0 chr17 24806855 24806965 -60631515 + L1M4 LINE L1 4787 4896 -1250 21 0 0 0 chr17 24807102 24807123 -60631357 + AT_rich Low_complexity Low_complexity 1 21 0 2121 96 7 0 chr17 24807134 24807425 -60631055 + AluSx SINE Alu 1 293 -19 289 256 0 13 chr17 24807442 24807520 -60630960 - L1ME1 LINE L1 -23 6143 6067 * 1613 191 25 3 chr17 24807515 24807882 -60630598 + L1M4 LINE L1 4905 5279 -867 2123 125 0 0 chr17 24808221 24808532 -60629948 - AluSx SINE Alu -1 311 1 466 167 0 39 chr17 24808532 24808610 -60629870 - FRAM/FAM SINE Alu -109 67 1 435 203 0 0 chr17 24808610 24808684 -60629796 - L1M3 LINE L1 -589 5594 5521 692 203 74 42 chr17 24808684 24808901 -60629579 - Charlie2a DNA MER1_type -1143 1719 1496 603 309 18 6 chr17 24808934 24809099 -60629381 - Charlie2b DNA MER1_type -2094 688 522 576 244 143 88 chr17 24809107 24809291 -60629189 - Charlie2b DNA MER1_type -2458 324 152 2018 108 17 3 chr17 24809291 24809578 -60628902 + AluSx SINE Alu 1 291 -21 576 244 143 88 chr17 24809578 24809616 -60628864 - Charlie2b DNA MER1_type -2630 152 118 891 191 7 0 chr17 24809616 24809768 -60628712 + FRAM SINE Alu 1 153 -13 576 244 143 88 chr17 24809768 24809851 -60628629 - Charlie2b DNA MER1_type -2664 118 1 24 32 0 0 chr17 24810131 24810162 -60628318 + AT_rich Low_complexity Low_complexity 1 31 0 2165 122 0 0 chr17 24810425 24810729 -60627751 - AluSx SINE Alu -8 304 1 24 67 0 0 chr17 24812344 24812389 -60626091 + AT_rich Low_complexity Low_complexity 1 45 0 31 26 0 0 chr17 24812565 24812603 -60625877 + AT_rich Low_complexity Low_complexity 1 38 0 309 26 0 0 chr17 24812894 24812932 -60625548 + (TG)n Simple_repeat Simple_repeat 1 38 0 483 254 170 0 chr17 24813559 24813724 -60624756 + MIR SINE MIR 68 260 -2 480 245 50 70 chr17 24814287 24814487 -60623993 + LTR41 LTR ERVL 23 218 -555 375 281 10 65 chr17 24814663 24814862 -60623618 + LTR41 LTR ERVL 585 772 -1 2275 93 3 0 chr17 24815229 24815529 -60622951 - AluSp SINE Alu -12 301 1 480 189 217 0 chr17 24817467 24817573 -60620907 - AluJo SINE Alu -178 134 6 3444 149 54 7 chr17 24818313 24818890 -60619590 - Tigger4(Zombi) DNA MER2_type -2079 652 49 366 74 0 0 chr17 24818903 24818957 -60619523 + (TG)n Simple_repeat Simple_repeat 2 55 0 1646 124 47 16 chr17 24819159 24819416 -60619064 + AluSg SINE Alu 12 276 -34 1372 158 37 60 chr17 24819689 24819987 -60618493 - AluJo SINE Alu -17 295 5 2198 81 7 0 chr17 24820316 24820599 -60617881 + AluSg SINE Alu 1 285 -25 255 31 0 0 chr17 24820600 24820632 -60617848 + (CAAAC)n Simple_repeat Simple_repeat 4 35 0 2180 103 56 44 chr17 24821087 24821447 -60617033 + THE1B LTR MaLR 1 364 0 210 189 57 0 chr17 24821456 24821509 -60616971 + A-rich Low_complexity Low_complexity 2 57 0 1661 160 39 0 chr17 24822078 24822360 -60616120 + AluJb SINE Alu 1 293 -19 22 0 0 0 chr17 24822618 24822640 -60615840 + AT_rich Low_complexity Low_complexity 1 22 0 1906 117 4 4 chr17 24822926 24823246 -60615234 - AluSx SINE Alu 0 324 5 652 174 87 14 chr17 24823364 24823502 -60614978 - LTR29 LTR ERV1 -68 554 407 1607 192 17 0 chr17 24824287 24824578 -60613902 + AluJb SINE Alu 1 296 -16 640 153 119 17 chr17 24824723 24824841 -60613639 - FLAM_A SINE Alu -3 130 1 203 0 37 0 chr17 24825629 24825656 -60612824 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 325 321 151 6 chr17 24825724 24825883 -60612597 + MIR3 SINE MIR 15 196 -12 1724 158 3 10 chr17 24825887 24826190 -60612290 - AluJo SINE Alu -11 301 1 1835 151 0 43 chr17 24826318 24826493 -60611987 - AluJo SINE Alu -1 311 155 1910 109 7 20 chr17 24826493 24826795 -60611685 - AluSx SINE Alu -10 302 5 1835 151 0 43 chr17 24826795 24826943 -60611537 - AluJo SINE Alu -157 155 2 299 261 174 26 chr17 24827288 24827403 -60611077 + MIR3 SINE MIR 10 141 -67 216 0 0 0 chr17 24828018 24828042 -60610438 + (A)n Simple_repeat Simple_repeat 1 24 0 1343 185 77 45 chr17 24828072 24828188 -60610292 + AluJo SINE Alu 3 114 -188 2000 108 0 11 chr17 24828188 24828467 -60610013 - AluSx SINE Alu -36 276 1 1343 185 77 45 chr17 24828467 24828483 -60609997 + AluJo SINE Alu 114 128 -174 275 0 0 28 chr17 24828483 24828519 -60609961 + (TAAAA)n Simple_repeat Simple_repeat 1 35 0 1343 185 77 45 chr17 24828519 24828671 -60609809 + AluJo SINE Alu 128 297 -5 201 204 61 41 chr17 24829155 24829204 -60609276 + MIR3 SINE MIR 127 176 -32 576 299 32 16 chr17 24829535 24829722 -60608758 + MLT1K LTR MaLR 70 259 -329 505 232 90 102 chr17 24829790 24830200 -60608280 + MLT1L LTR MaLR 99 503 -8 1022 220 91 32 chr17 24830216 24830525 -60607955 + MLT1K LTR MaLR 258 584 -4 1473 71 165 36 chr17 24830635 24830955 -60607525 + Tigger2 DNA MER2_type 1 2579 -139 204 235 0 0 chr17 24831068 24831119 -60607361 + (TA)n Simple_repeat Simple_repeat 1 51 0 24 0 0 0 chr17 24831193 24831217 -60607263 + AT_rich Low_complexity Low_complexity 1 24 0 524 282 159 9 chr17 24831292 24831512 -60606968 + MIR SINE MIR 9 261 -1 496 195 17 103 chr17 24831936 24832110 -60606370 - L1M4 LINE L1 -2211 3935 3777 850 240 27 27 chr17 24832151 24832372 -60606108 - MIR SINE MIR -2 260 40 2259 50 10 30 chr17 24832449 24832751 -60605729 - AluY SINE Alu -15 296 1 23 54 0 0 chr17 24832893 24832930 -60605550 + AT_rich Low_complexity Low_complexity 1 37 0 218 105 81 47 chr17 24835875 24835961 -60602519 + (CTATT)n Simple_repeat Simple_repeat 2 90 0 640 273 197 25 chr17 24837563 24838099 -60600381 + L2 LINE L2 2677 3306 -7 546 267 93 61 chr17 24838076 24838323 -60600157 - MIR SINE MIR -2 260 6 * 2278 97 0 0 chr17 24838728 24839017 -60599463 + AluSq SINE Alu 1 289 -24 25 31 0 0 chr17 24839017 24839049 -60599431 + AT_rich Low_complexity Low_complexity 1 32 0 2270 91 0 36 chr17 24839562 24839871 -60598609 - AluSx SINE Alu -14 298 1 1435 146 100 43 chr17 24840067 24840347 -60598133 - AluJo SINE Alu -16 296 1 350 116 0 101 chr17 24840473 24840542 -60597938 + AluJ/FRAM SINE Alu 230 291 -11 272 326 0 11 chr17 24840858 24840950 -60597530 - L2 LINE L2 0 3313 3223 23 24 0 24 chr17 24841548 24841563 -60596917 + AT_rich Low_complexity Low_complexity 1 15 -25 1952 130 14 0 chr17 24841563 24841847 -60596633 - AluSx SINE Alu -24 288 1 23 24 0 24 chr17 24841847 24841872 -60596608 + AT_rich Low_complexity Low_complexity 15 40 0 202 308 13 13 chr17 24842512 24842590 -60595890 + L3b LINE CR1 1316 1393 -190 26 0 0 0 chr17 24842591 24842617 -60595863 + AT_rich Low_complexity Low_complexity 1 26 0 23 33 0 0 chr17 24842918 24842948 -60595532 + AT_rich Low_complexity Low_complexity 1 30 0 1985 166 0 0 chr17 24843393 24843694 -60594786 - AluJo SINE Alu -11 301 1 739 80 0 0 chr17 24844595 24844695 -60593785 + AluY SINE Alu 205 304 -7 619 202 0 0 chr17 24844696 24844810 -60593670 - MER47A DNA MER2_type -252 114 1 373 168 42 87 chr17 24844858 24845083 -60593397 + Charlie7 DNA MER1_type 7 2569 -43 6967 30 5 0 chr17 24845135 24845978 -60592502 - L1PA4 LINE L1 -1044 5102 4256 7464 36 0 1 chr17 24845978 24847046 -60591434 + L1PA4 LINE L1 5085 6151 -4 347 145 92 0 chr17 24847065 24847141 -60591339 - MER3 DNA MER1_type 0 2624 2542 1951 155 3 19 chr17 24847141 24847458 -60591022 + AluJb SINE Alu 1 312 0 348 161 0 0 chr17 24847460 24847516 -60590964 - MER3 DNA MER1_type -117 92 37 570 254 102 20 chr17 24847516 24847713 -60590767 + MIR SINE MIR 50 262 0 321 255 36 16 chr17 24848175 24848287 -60590193 - MIR SINE MIR -63 145 33 869 200 0 0 chr17 24848519 24848669 -60589811 - AluJb SINE Alu -30 282 133 2075 127 0 13 chr17 24848787 24849087 -60589393 - AluSx SINE Alu -16 296 1 2360 83 0 0 chr17 24849123 24849413 -60589067 + AluY SINE Alu 1 290 -21 934 249 222 11 chr17 24851186 24851619 -60586861 + L2 LINE L2 2066 2589 -725 21 36 0 0 chr17 24851700 24851728 -60586752 + AT_rich Low_complexity Low_complexity 1 28 0 636 252 208 8 chr17 24852109 24852424 -60586056 + L2 LINE L2 2687 3061 -252 400 246 27 45 chr17 24852431 24852541 -60585939 + Tigger3(Golem) DNA MER2_type 1 108 -2921 351 125 125 0 chr17 24852541 24852613 -60585867 + Tigger3(Golem) DNA MER2_type 2285 2365 -664 923 185 85 16 chr17 24852618 24852807 -60585673 + AluJb SINE Alu 107 308 -4 3293 98 28 20 chr17 24852807 24853317 -60585163 + Tigger3(Golem) DNA MER2_type 2428 2941 -88 446 232 119 31 chr17 24853348 24853542 -60584938 + L2 LINE L2 3103 3313 0 436 320 76 12 chr17 24853531 24853703 -60584777 - MIR SINE MIR -6 256 74 * 1756 146 0 60 chr17 24853811 24853947 -60584533 + AluJb SINE Alu 1 144 -168 2176 120 3 0 chr17 24853947 24854239 -60584241 + AluSx SINE Alu 1 293 -19 1756 146 0 60 chr17 24854239 24854417 -60584063 + AluJb SINE Alu 144 296 -16 365 177 137 50 chr17 24854458 24854585 -60583895 + L1MC5 LINE L1 7109 7234 -727 267 200 31 15 chr17 24854921 24854986 -60583494 + L1MC5 LINE L1 7509 7574 -387 485 182 42 28 chr17 24855012 24855155 -60583325 + L1MC5 LINE L1 7639 7783 -178 5307 54 16 3 chr17 24855507 24856190 -60582290 - L1PA6 LINE L1 -6 6148 5457 334 285 41 24 chr17 24856292 24856376 -60582104 - L1ME LINE L1 -303 5818 5730 1956 148 6 16 chr17 24856376 24856687 -60581793 - AluSx SINE Alu -4 308 1 334 285 41 24 chr17 24856687 24856725 -60581755 - L1ME LINE L1 -391 5730 5694 307 266 92 28 chr17 24856971 24857080 -60581400 - HAL1 LINE L1 -1784 723 608 701 301 20 5 chr17 24857121 24857324 -60581156 - HAL1 LINE L1 -2108 399 194 1500 190 112 9 chr17 24857803 24858134 -60580346 + MLT1A1 LTR MaLR 1 365 0 246 95 0 0 chr17 24858149 24858191 -60580289 - Alu SINE Alu -5 298 257 430 254 53 9 chr17 24860020 24860134 -60578346 - MIR3 SINE MIR -81 127 9 327 227 248 7 chr17 24860284 24860425 -60578055 - MIR SINE MIR -7 255 81 381 314 72 26 chr17 24860653 24860806 -60577674 - L2 LINE L2 -1 3271 3112 1775 152 14 17 chr17 24861160 24861450 -60577030 + AluJo SINE Alu 1 289 -23 413 216 23 0 chr17 24861482 24861570 -60576910 - MIR SINE MIR 0 262 173 201 161 274 0 chr17 24861801 24861863 -60576617 - MIR SINE MIR -13 249 171 210 265 0 0 chr17 24862194 24862243 -60576237 + (TATATG)n Simple_repeat Simple_repeat 2 50 0 199 329 27 0 chr17 24862349 24862422 -60576058 - L2 LINE L2 -1023 2291 2217 363 301 114 16 chr17 24863526 24863719 -60574761 - MIR SINE MIR -3 259 48 616 270 122 5 chr17 24863891 24864080 -60574400 + MIR SINE MIR 29 239 -23 381 75 0 0 chr17 24864098 24864151 -60574329 + (CAT)n Simple_repeat Simple_repeat 2 54 0 622 264 42 56 chr17 24864191 24864407 -60574073 - MIR SINE MIR -30 232 20 2124 109 10 3 chr17 24864518 24864811 -60573669 + AluSx SINE Alu 1 295 -17 2120 128 0 3 chr17 24867182 24867480 -60571000 + AluSc SINE Alu 1 297 -12 794 122 58 0 chr17 24870076 24870215 -60568265 - L1MB4 LINE L1 -6 6174 6028 230 355 16 16 chr17 24870225 24870349 -60568131 + L2 LINE L2 2698 2821 -493 207 356 20 0 chr17 24870437 24870538 -60567942 + L2 LINE L2 2949 3051 -221 563 240 43 33 chr17 24870694 24870868 -60567612 + MIR SINE MIR 2 175 -33 23 0 0 0 chr17 24870877 24870900 -60567580 + AT_rich Low_complexity Low_complexity 1 23 0 210 253 67 53 chr17 24870908 24870983 -60567497 + L2 LINE L2 3195 3270 -2 2051 108 24 20 chr17 24871252 24871549 -60566931 - AluSx SINE Alu -14 298 1 429 268 31 0 chr17 24871647 24871744 -60566736 - L2 LINE L2 0 3313 3214 390 254 53 0 chr17 24872063 24872177 -60566303 + MER94 DNA DNA 15 134 0 32 26 0 0 chr17 24872569 24872608 -60565872 + AT_rich Low_complexity Low_complexity 1 39 0 180 0 0 0 chr17 24873552 24873572 -60564908 + (T)n Simple_repeat Simple_repeat 1 20 0 2011 125 7 13 chr17 24873618 24873921 -60564559 + AluSq SINE Alu 1 301 -12 1760 132 27 108 chr17 24874868 24875238 -60563242 + MER77 LTR ERV1 1 340 -265 627 115 0 0 chr17 24875213 24875300 -60563180 + MER77 LTR ERV1 519 605 0 * 415 212 62 2 chr17 24875697 24875837 -60562643 - MER77 LTR ERV1 -424 181 1 1225 188 0 0 chr17 24875888 24876090 -60562390 + MER2 DNA MER2_type 1 202 -143 1834 129 0 29 chr17 24876129 24876408 -60562072 - AluJb SINE Alu -37 275 5 33 25 0 0 chr17 24876415 24876455 -60562025 + AT_rich Low_complexity Low_complexity 1 40 0 916 271 36 0 chr17 24877124 24877371 -60561109 + MIR SINE MIR 6 261 -1 359 183 42 0 chr17 24877552 24877623 -60560857 + MIR SINE MIR 116 189 -73 331 301 150 31 chr17 24878242 24878435 -60560045 - L2 LINE L2 0 3313 3098 252 0 0 0 chr17 24878908 24878936 -60559544 + (T)n Simple_repeat Simple_repeat 1 28 0 456 230 204 43 chr17 24878943 24879339 -60559141 - L1MC5 LINE L1 -50 7911 7452 22 35 0 0 chr17 24879387 24879416 -60559064 + AT_rich Low_complexity Low_complexity 1 29 0 2642 249 61 14 chr17 24880956 24881061 -60557419 - L1ME3 LINE L1 -30 6132 6033 2197 100 0 3 chr17 24881061 24881350 -60557130 - AluSg SINE Alu -22 288 1 2642 249 61 14 chr17 24881350 24882012 -60556468 - L1ME3 LINE L1 -129 6033 5329 1551 229 41 81 chr17 24882188 24882916 -60555564 - L1ME3 LINE L1 -932 5214 4516 284 302 22 50 chr17 24884157 24884296 -60554184 + MER5A DNA MER1_type 44 178 -11 501 298 116 10 chr17 24884487 24884685 -60553795 + MIR SINE MIR 18 236 -26 337 316 71 51 chr17 24885021 24885217 -60553263 - MIR SINE MIR -44 218 19 1903 156 10 0 chr17 24885453 24885755 -60552725 - AluJb SINE Alu -7 305 1 1490 195 24 24 chr17 24885988 24886280 -60552200 - AluJo SINE Alu -20 292 1 252 125 75 0 chr17 24887426 24887466 -60551014 - MER5B DNA MER1_type -134 44 2 654 246 129 11 chr17 24888416 24888696 -60549784 + LTR50 LTR ERVL 483 795 0 2292 101 13 0 chr17 24888724 24889032 -60549448 + AluSx SINE Alu 1 312 0 506 291 70 67 chr17 24889174 24889306 -60549174 - L3 LINE CR1 -758 819 689 715 191 0 22 chr17 24889306 24889442 -60549038 + FLAM_C SINE Alu 1 133 0 506 291 70 67 chr17 24889442 24889594 -60548886 - L3 LINE CR1 -888 689 534 237 234 47 16 chr17 24889720 24889784 -60548696 - L3 LINE CR1 -1260 317 252 758 137 81 0 chr17 24889902 24890026 -60548454 - FRAM SINE Alu -23 153 20 770 134 0 8 chr17 24890114 24890233 -60548247 + FLAM_C SINE Alu 1 118 -15 429 20 0 0 chr17 24890237 24890287 -60548193 + (CA)n Simple_repeat Simple_repeat 2 51 0 1919 179 139 16 chr17 24890471 24890917 -60547563 - L1MC4 LINE L1 -386 7656 7156 29 0 0 0 chr17 24894355 24894384 -60544096 + AT_rich Low_complexity Low_complexity 1 29 0 435 253 84 40 chr17 24894410 24894640 -60543840 + L1MC5 LINE L1 7694 8042 0 444 248 208 41 chr17 24894644 24895063 -60543417 + L1ME3 LINE L1 4358 4846 -1300 1629 178 196 6 chr17 24895116 24895712 -60542768 + LTR50 LTR ERVL 1 795 0 859 302 39 13 chr17 24895715 24896099 -60542381 + L1ME3 LINE L1 4899 5292 -854 1533 239 31 37 chr17 24896104 24896593 -60541887 + L1ME3 LINE L1 5477 5962 -208 3757 88 132 0 chr17 24896696 24897243 -60541237 + MER41B LTR ERV1 1 619 -16 243 304 54 0 chr17 24897243 24897355 -60541125 + L1ME3 LINE L1 6011 6128 -34 758 11 11 0 chr17 24898513 24898604 -60539876 + (CA)n Simple_repeat Simple_repeat 2 93 0 1146 222 59 77 chr17 24898728 24898994 -60539486 + L1ME2 LINE L1 875 1144 -5502 1893 113 53 8 chr17 24898994 24899286 -60539194 + AluSx SINE Alu 4 307 0 1146 222 59 77 chr17 24899286 24899373 -60539107 + L1ME2 LINE L1 1144 1231 -5415 2305 19 0 0 chr17 24899373 24899633 -60538847 + AluYa5 SINE Alu 52 311 0 1146 222 59 77 chr17 24899633 24900238 -60538242 + L1ME2 LINE L1 1231 1938 -4708 1011 211 26 4 chr17 24900240 24900505 -60537975 + L1ME2 LINE L1 4832 5102 -1542 * 1906 241 99 7 chr17 24900502 24901087 -60537393 + L1ME2 LINE L1 6015 6653 -9 2390 72 0 10 chr17 24901274 24901579 -60536901 - AluY SINE Alu -9 302 1 1906 140 36 0 chr17 24902257 24902536 -60535944 - AluSx SINE Alu -21 291 3 187 243 40 68 chr17 24902628 24902702 -60535778 + L2 LINE L2 3197 3268 -45 268 230 52 91 chr17 24902732 24902930 -60535550 - L1M4 LINE L1 -2256 3890 3700 2464 75 3 3 chr17 24903030 24903338 -60535142 - AluSq SINE Alu -5 308 1 2259 91 7 3 chr17 24905936 24906233 -60532247 + AluSg SINE Alu 1 298 -12 28 0 0 0 chr17 24907365 24907393 -60531087 + AT_rich Low_complexity Low_complexity 1 28 0 195 369 121 27 chr17 24907543 24907692 -60530788 - L2 LINE L2 0 3272 3110 2265 104 0 3 chr17 24907824 24908121 -60530359 - AluSc SINE Alu -13 296 1 1058 244 52 35 chr17 24908236 24908668 -60529812 + L1ME1 LINE L1 2560 2956 -3688 1532 199 42 127 chr17 24908710 24910612 -60527868 + L1ME1 LINE L1 4654 6326 -338 2868 7 0 0 chr17 24910612 24910921 -60527559 + AluYb8 SINE Alu 1 309 -9 1532 199 42 127 chr17 24910921 24911232 -60527248 + L1ME1 LINE L1 6326 6662 -2 514 251 52 58 chr17 24911337 24911508 -60526972 + L1ME LINE L1 5528 5698 -423 2361 91 3 0 chr17 24911508 24911817 -60526663 + AluSp SINE Alu 1 310 -3 514 251 52 58 chr17 24911817 24911936 -60526544 + L1ME LINE L1 5698 5816 -305 225 216 0 0 chr17 24912585 24912622 -60525858 + MIR SINE MIR 113 149 -59 336 268 0 52 chr17 24916925 24917022 -60521458 - MIR SINE MIR -109 153 62 202 329 14 27 chr17 24917050 24917123 -60521357 - MIR3 SINE MIR -133 75 4 21 0 0 0 chr17 24917215 24917236 -60521244 + AT_rich Low_complexity Low_complexity 1 21 0 2047 103 14 0 chr17 24917607 24917952 -60520528 + AluSc SINE Alu 1 349 0 219 170 0 0 chr17 24919191 24919238 -60519242 + (TA)n Simple_repeat Simple_repeat 2 48 0 300 234 45 45 chr17 24919477 24919588 -60518892 - L1ME3A LINE L1 -222 5948 5838 234 226 36 36 chr17 24919624 24919708 -60518772 - L1ME3A LINE L1 -310 5860 5777 * 666 283 50 14 chr17 24919695 24919978 -60518502 + L1ME1 LINE L1 1335 1627 -4769 565 110 31 118 chr17 24919990 24920117 -60518363 - FLAM_C SINE Alu -20 123 8 1551 202 81 53 chr17 24920123 24920617 -60517863 + L1ME1 LINE L1 1615 2122 -4274 2567 224 70 32 chr17 24920633 24921592 -60516888 + L1ME1 LINE L1 5197 6196 -39 1818 183 118 103 chr17 24921786 24922698 -60515782 + L1MC5 LINE L1 6558 7498 -463 196 339 16 0 chr17 24922858 24922920 -60515560 - MIR3 SINE MIR -2 206 144 749 149 50 0 chr17 24923624 24923745 -60514735 - FLAM_C SINE Alu -6 127 1 32 0 0 0 chr17 24923852 24923884 -60514596 + AT_rich Low_complexity Low_complexity 1 32 0 466 316 38 38 chr17 24924013 24924250 -60514230 + MLT1J LTR MaLR 4 240 -271 1374 176 13 93 chr17 24924445 24924737 -60513743 - MER7A DNA MER2_type -2695 343 88 2147 120 0 3 chr17 24924737 24925038 -60513442 - AluSx SINE Alu -12 300 1 1374 176 13 93 chr17 24925038 24925120 -60513360 - MER7A DNA MER2_type -2950 88 1 2369 91 0 0 chr17 24925634 24925931 -60512549 + AluSg SINE Alu 1 297 -13 238 289 12 48 chr17 24926023 24926106 -60512374 + MIR SINE MIR 30 109 -99 508 313 69 13 chr17 24926181 24926414 -60512066 - MIR SINE MIR -9 253 8 1641 162 0 7 chr17 24927085 24927356 -60511124 + AluSg SINE Alu 41 309 -1 1599 195 3 7 chr17 24927463 24927760 -60510720 + AluJb SINE Alu 13 308 -4 1139 111 0 12 chr17 24927764 24927936 -60510544 + L1PA11 LINE L1 6005 6174 0 2380 104 0 0 chr17 24927944 24928251 -60510229 + AluSg SINE Alu 3 309 -1 295 216 27 14 chr17 24928268 24928342 -60510138 - MLT1J LTR MaLR -315 196 122 990 218 50 38 chr17 24928556 24928817 -60509663 + MLT1J LTR MaLR 2 265 -246 1299 126 48 0 chr17 24928842 24929073 -60509407 - L1MA9 LINE L1 -1 6311 6070 244 258 34 45 chr17 24929164 24929253 -60509227 + LTR16C LTR ERVL 156 243 -248 933 143 0 0 chr17 24929770 24929903 -60508577 + AluJ SINE Alu 1 133 -179 939 193 12 0 chr17 24929944 24930115 -60508365 + AluJ SINE Alu 120 292 -20 364 200 0 0 chr17 24930180 24930240 -60508240 - AluJb SINE Alu -123 179 120 883 20 0 0 chr17 24930272 24930374 -60508106 - L1PA6 LINE L1 -11 6143 6042 21769 118 16 21 chr17 24930374 24933844 -60504636 - L1P LINE L1 -2682 3464 11 2052 117 7 3 chr17 24933855 24934146 -60504334 - AluSq SINE Alu -19 294 3 723 213 7 0 chr17 24934155 24934291 -60504189 - FLAM_C SINE Alu -6 137 1 676 267 128 31 chr17 24934294 24934683 -60503797 + HAL1b LINE L1 415 841 -507 328 240 27 0 chr17 24934942 24935017 -60503463 + L1MC5 LINE L1 6633 6709 -1252 300 100 0 0 chr17 24935041 24935091 -60503389 - L1MA9 LINE L1 0 6312 6263 2003 132 7 3 chr17 24935092 24935381 -60503099 + AluSx SINE Alu 1 290 -22 229 202 0 43 chr17 24935406 24935500 -60502980 + (TTAA)n Simple_repeat Simple_repeat 4 93 0 1995 131 23 71 chr17 24935501 24935935 -60502545 - L1MA9 LINE L1 -86 6226 5814 546 262 62 24 chr17 24935952 24936162 -60502318 + L1MC4a LINE L1 6723 6940 -868 1073 180 111 66 chr17 24936163 24936452 -60502028 + AluJo SINE Alu 1 302 0 1985 159 0 7 chr17 24936462 24936764 -60501716 + AluSx SINE Alu 1 300 -12 763 215 66 29 chr17 24936810 24937052 -60501428 + L1MC5 LINE L1 7268 7518 -443 280 242 0 0 chr17 24937073 24937135 -60501345 + GA-rich Low_complexity Low_complexity 2 63 0 2299 112 0 0 chr17 24937158 24937453 -60501027 + AluSx SINE Alu 1 295 -17 338 214 103 60 chr17 24937586 24937703 -60500777 + L1ME3A LINE L1 5988 6109 -61 304 243 14 0 chr17 24937795 24937869 -60500611 + MLT1J LTR MaLR 122 196 -315 276 213 163 38 chr17 24938116 24938196 -60500284 - L2 LINE L2 -1 3312 3223 1911 131 0 31 chr17 24939208 24939528 -60498952 + AluSx SINE Alu 1 311 0 981 156 85 75 chr17 24940000 24940212 -60498268 + AluJb SINE Alu 87 300 -12 1818 169 0 0 chr17 24940221 24940511 -60497969 + AluJb SINE Alu 1 290 -22 1288 188 33 0 chr17 24941028 24941241 -60497239 - AluJo SINE Alu -92 220 1 4018 162 83 7 chr17 24941352 24942514 -60495966 + L1MB2 LINE L1 4910 6145 -26 276 222 16 0 chr17 24942701 24942764 -60495716 - MIR SINE MIR -27 235 172 394 174 73 28 chr17 24942955 24943064 -60495416 + L1MC2 LINE L1 6226 6339 -5 2442 104 8 6 chr17 24943882 24944236 -60494244 + THE1A LTR MaLR 1 355 0 258 105 0 0 chr17 24944311 24944349 -60494131 + (A)n Simple_repeat Simple_repeat 1 38 0 2006 153 0 9 chr17 24944856 24945197 -60493283 + MLT1A1 LTR MaLR 1 338 -27 374 178 230 0 chr17 24946315 24946450 -60492030 - MER104 DNA Tc2 0 180 15 24 0 0 0 chr17 24946986 24947010 -60491470 + AT_rich Low_complexity Low_complexity 1 24 0 679 71 81 0 chr17 24947061 24947160 -60491320 - L1PA11 LINE L1 -2 6172 6066 183 244 24 0 chr17 24947470 24947511 -60490969 - L2 LINE L2 -8 3264 3223 254 280 136 77 chr17 24947860 24948339 -60490141 + L1ME1 LINE L1 58 564 -5555 501 274 150 70 chr17 24948359 24948805 -60489675 + L1ME1 LINE L1 610 1091 -5028 1429 169 0 8 chr17 24948857 24949094 -60489386 + AluJb SINE Alu 76 310 -2 284 291 68 0 chr17 24949102 24949250 -60489230 + L1ME1 LINE L1 2116 2273 -3856 232 281 54 35 chr17 24949334 24949378 -60489102 + L1ME2 LINE L1 71 113 -6310 201 94 0 0 chr17 24949378 24949410 -60489070 + (TTGG)n Simple_repeat Simple_repeat 1 32 0 232 281 54 35 chr17 24949410 24949568 -60488912 + L1ME2 LINE L1 113 277 -6146 1115 233 36 96 chr17 24949770 24950215 -60488265 + L1ME2 LINE L1 5134 5533 -1408 1162 164 42 19 chr17 24950215 24950428 -60488052 + MER20 DNA MER1_type 2 219 0 1115 233 36 96 chr17 24950428 24950600 -60487880 + L1ME2 LINE L1 5533 5714 -1227 33 66 0 0 chr17 24950640 24950701 -60487779 + AT_rich Low_complexity Low_complexity 1 61 0 2380 81 7 0 chr17 24950759 24951055 -60487425 + AluSc SINE Alu 1 298 -11 673 89 0 0 chr17 24951209 24951299 -60487181 + AluSc SINE Alu 209 298 -11 2666 206 68 36 chr17 24951321 24951403 -60487077 + L1ME2 LINE L1 5801 5879 -1080 2139 138 0 0 chr17 24951403 24951701 -60486779 - AluSx SINE Alu -14 298 1 2666 206 68 36 chr17 24951701 24952654 -60485826 + L1ME2 LINE L1 5879 6868 -91 1914 172 7 0 chr17 24952677 24952973 -60485507 + AluJo SINE Alu 1 298 -14 234 282 55 0 chr17 24953009 24953119 -60485361 + L1ME1 LINE L1 2627 2742 -3387 434 140 75 0 chr17 24953233 24953326 -60485154 + HY1 scRNA scRNA 7 106 -6 228 167 21 0 chr17 24953338 24953386 -60485094 + L1ME1 LINE L1 2841 2889 -3240 * 479 183 17 17 chr17 24953380 24953495 -60484985 + L1ME1 LINE L1 4807 4921 -1208 2295 104 0 0 chr17 24953495 24953794 -60484686 - AluSx SINE Alu -11 301 3 180 0 0 0 chr17 24953797 24953817 -60484663 + (TA)n Simple_repeat Simple_repeat 2 21 0 580 175 26 0 chr17 24953837 24953951 -60484529 + Ricksha DNA DNA 3 119 -1927 1655 127 55 33 chr17 24953977 24954338 -60484142 + Ricksha DNA DNA 2348 2716 -530 2048 213 70 19 chr17 24954352 24955209 -60483271 + L1ME1 LINE L1 4927 5824 -325 260 314 184 54 chr17 24955216 24955846 -60482634 - L2 LINE L2 -1370 1944 1233 194 182 0 0 chr17 24955861 24955894 -60482586 - MER5C DNA MER1_type -200 124 92 501 322 128 13 chr17 24955969 24956390 -60482090 + L2 LINE L2 2582 3055 -217 811 310 43 0 chr17 24956712 24956944 -60481536 - MIR SINE MIR -3 259 18 748 197 0 0 chr17 24956958 24957080 -60481400 + FLAM_A SINE Alu 1 122 -11 1080 209 17 51 chr17 24957207 24957442 -60481038 + AluJo SINE Alu 3 229 -83 225 0 0 0 chr17 24957455 24957480 -60481000 + (A)n Simple_repeat Simple_repeat 1 25 0 290 289 62 10 chr17 24957524 24957621 -60480859 - L3 LINE CR1 -835 742 641 1802 171 23 3 chr17 24958424 24958723 -60479757 + AluJo SINE Alu 2 306 -6 2145 120 7 0 chr17 24958774 24959066 -60479414 + AluSx SINE Alu 1 294 -18 1012 103 0 27 chr17 24959718 24959902 -60478578 + (TA)n Simple_repeat Simple_repeat 2 180 0 697 113 57 0 chr17 24960509 24960615 -60477865 + FRAM SINE Alu 37 148 -28 254 294 11 0 chr17 24960669 24960761 -60477719 - L1ME LINE L1 -354 5767 5675 344 223 85 23 chr17 24960953 24961083 -60477397 - L1ME LINE L1 -770 5408 5271 870 147 0 29 chr17 24961083 24961219 -60477261 + AluJb SINE Alu 1 132 -180 1680 205 69 5 chr17 24961552 24961957 -60476523 - MER63B DNA MER1_type -5 431 1 26 0 0 0 chr17 24962402 24962428 -60476052 + AT_rich Low_complexity Low_complexity 1 26 0 1970 157 0 0 chr17 24962512 24962811 -60475669 - AluJb SINE Alu -13 299 1 716 191 22 77 chr17 24962867 24963050 -60475430 - FAM SINE Alu -2 173 1 2573 65 0 0 chr17 24964400 24964707 -60473773 + AluSp SINE Alu 1 307 -6 555 290 0 0 chr17 24965245 24965369 -60473111 + MIR3 SINE MIR 62 185 -23 508 260 72 28 chr17 24965433 24965683 -60472797 + L1ME4a LINE L1 5853 6113 -8 235 188 29 43 chr17 24965941 24966010 -60472470 - MIR SINE MIR -21 241 174 1168 189 9 44 chr17 24966010 24966238 -60472242 + AluJo SINE Alu 1 220 -92 2336 102 0 0 chr17 24966266 24966569 -60471911 + AluSc SINE Alu 3 305 -4 444 262 63 24 chr17 24966569 24966695 -60471785 - MIR SINE MIR -79 183 53 727 210 114 30 chr17 24966704 24966871 -60471609 - AluJo SINE Alu -131 181 1 1004 145 0 7 chr17 24968579 24968731 -60469749 + AluJo SINE Alu 1 151 -161 1256 176 55 3 chr17 24968792 24969081 -60469399 + MER33 DNA MER1_type 21 324 0 28 0 0 0 chr17 24969379 24969407 -60469073 + AT_rich Low_complexity Low_complexity 1 28 0 469 265 20 0 chr17 24969848 24969950 -60468530 - MIR SINE MIR -66 142 39 2319 78 3 0 chr17 24969998 24970291 -60468189 + AluSc SINE Alu 1 294 -15 279 0 0 0 chr17 24970346 24970377 -60468103 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 21 0 0 0 chr17 24970395 24970416 -60468064 + AT_rich Low_complexity Low_complexity 1 21 0 1566 142 116 25 chr17 24970557 24970832 -60467648 - AluJb SINE Alu -12 300 1 577 215 49 0 chr17 24971101 24971245 -60467235 - MER106B DNA MER1_type -7 1052 902 249 309 204 73 chr17 24971338 24971652 -60466828 + L2 LINE L2 2918 3272 0 2054 122 11 0 chr17 24971668 24971954 -60466526 - AluSq SINE Alu -24 289 1 186 315 72 27 chr17 24972066 24972177 -60466303 + L2 LINE L2 3149 3264 -8 840 188 74 0 chr17 24974447 24974623 -60463857 - MIR SINE MIR 0 262 74 777 120 60 0 chr17 24976152 24976285 -60462195 + MLT1B LTR MaLR 204 344 -46 304 265 39 20 chr17 24976330 24976432 -60462048 - L2 LINE L2 -40 3273 3170 28 0 0 0 chr17 24976639 24976667 -60461813 + AT_rich Low_complexity Low_complexity 1 28 0 212 175 0 0 chr17 24978368 24978408 -60460072 + (CTG)n Simple_repeat Simple_repeat 1 40 0 204 40 0 0 chr17 24978513 24978538 -60459942 + (TGG)n Simple_repeat Simple_repeat 2 26 0 189 214 0 0 chr17 24978808 24978850 -60459630 + A-rich Low_complexity Low_complexity 1 42 0 245 323 0 0 chr17 24979726 24979825 -60458655 + C-rich Low_complexity Low_complexity 5 103 0 * 288 253 0 0 chr17 24979754 24979841 -60458639 + (CCG)n Simple_repeat Simple_repeat 1 87 0 241 279 0 0 chr17 24980157 24980218 -60458262 + T-rich Low_complexity Low_complexity 1 61 0 1731 167 16 23 chr17 24980877 24981183 -60457297 - AluJo SINE Alu -8 304 1 197 331 118 43 chr17 24981337 24981413 -60457067 + L2 LINE L2 2444 2513 -801 1528 120 18 5 chr17 24981413 24981630 -60456850 - AluJb SINE Alu -7 305 86 197 331 118 43 chr17 24981630 24981807 -60456673 + L2 LINE L2 2513 2716 -598 1482 173 65 0 chr17 24981807 24982084 -60456396 + AluJb SINE Alu 1 295 -17 363 323 158 34 chr17 24982097 24982518 -60455962 + L2 LINE L2 2794 3272 0 507 261 93 19 chr17 24982525 24982686 -60455794 + MIR SINE MIR 49 221 -41 547 246 43 22 chr17 24982784 24982922 -60455558 + MER5A DNA MER1_type 47 187 -2 189 310 90 40 chr17 24982929 24983029 -60455451 + L2 LINE L2 3209 3313 0 246 250 18 0 chr17 24983068 24983124 -60455356 - L2 LINE L2 0 3272 3216 2469 71 0 0 chr17 24983191 24983488 -60454992 - AluY SINE Alu -14 297 1 2060 73 0 8 chr17 24983854 24984115 -60454365 - AluY SINE Alu -52 259 1 2256 93 0 0 chr17 24984124 24984413 -60454067 - AluSg SINE Alu -21 289 1 2199 98 0 3 chr17 24984455 24984741 -60453739 - AluSx SINE Alu -1 311 27 707 98 0 0 chr17 24984842 24984934 -60453546 + AluSg/x SINE Alu 185 276 -36 261 0 0 0 chr17 24984937 24984966 -60453514 + (CAAAA)n Simple_repeat Simple_repeat 1 29 0 843 178 48 0 chr17 24985125 24985271 -60453209 - FRAM SINE Alu -12 154 2 306 293 14 57 chr17 24985458 24985598 -60452882 + MIR SINE MIR 13 146 -116 640 135 0 57 chr17 24986181 24986322 -60452158 - SVA Other Other -791 595 463 1672 168 23 30 chr17 24986322 24986625 -60451855 - AluJo SINE Alu -11 301 1 337 200 17 7 chr17 24986568 24986645 -60451835 - AluJ/FLAM SINE Alu -245 57 1 1402 83 11 0 chr17 24986793 24986974 -60451506 - AluSp SINE Alu -120 193 11 254 229 14 29 chr17 24986985 24987055 -60451425 + Tigger2 DNA MER2_type 12 80 -2638 * 1977 142 39 18 chr17 24987049 24987380 -60451100 + Tigger2 DNA MER2_type 225 562 -2156 183 156 0 0 chr17 24987380 24987412 -60451068 + CT-rich Low_complexity Low_complexity 1 32 0 1978 138 7 0 chr17 24987412 24987717 -60450763 - AluSx SINE Alu -5 307 1 282 138 0 0 chr17 24987763 24987821 -60450659 + (T)n Simple_repeat Simple_repeat 1 58 0 289 295 98 54 chr17 24988820 24989156 -60449324 - L1MC5 LINE L1 -60 7901 7551 1237 125 0 0 chr17 24989210 24989386 -60449094 - AluSg/x SINE Alu -11 301 126 1845 146 6 19 chr17 24989386 24989702 -60448778 - AluSx SINE Alu 0 312 1 259 330 30 10 chr17 24989818 24989918 -60448562 + Tigger8 DNA MER2_type 522 623 -43 254 155 121 0 chr17 24990741 24990799 -60447681 - AluSp/q SINE Alu -8 295 231 1715 133 0 4 chr17 24990827 24991076 -60447404 - AluSx SINE Alu -64 248 1 1932 161 0 0 chr17 24991574 24991884 -60446596 + AluSx SINE Alu 1 310 -2 249 326 11 0 chr17 24991894 24991983 -60446497 - L3 LINE CR1 -352 1225 1136 342 61 0 0 chr17 24992304 24992353 -60446127 + (T)n Simple_repeat Simple_repeat 1 49 0 1646 144 3 67 chr17 24992568 24992748 -60445732 - AluJo SINE Alu -10 302 149 2019 134 3 3 chr17 24992748 24993047 -60445433 - AluSc SINE Alu -10 299 1 1646 144 3 67 chr17 24993047 24993179 -60445301 - AluJo SINE Alu -163 149 10 2158 116 6 0 chr17 24993254 24993565 -60444915 - AluSq SINE Alu 0 313 1 363 340 70 0 chr17 24993565 24993750 -60444730 - LTR67 LTR ERVL -5 552 355 536 120 32 80 chr17 24993811 24993847 -60444633 - MLT2B1 LTR ERVL 0 520 484 216 0 0 0 chr17 24993847 24993871 -60444609 + (CA)n Simple_repeat Simple_repeat 2 25 0 536 120 32 80 chr17 24993871 24993959 -60444521 - MLT2B1 LTR ERVL -36 484 402 1430 107 44 35 chr17 24993959 24994276 -60444204 + SVA Other Other 467 786 -600 282 233 39 19 chr17 24994376 24994479 -60444001 + (CATA)n Simple_repeat Simple_repeat 1 105 0 515 238 16 24 chr17 24994667 24994793 -60443687 + MIR SINE MIR 20 144 -118 2041 120 0 10 chr17 24994945 24995246 -60443234 - AluSx SINE Alu -12 300 3 508 289 29 15 chr17 24995651 24995881 -60442599 + MIR SINE MIR 18 253 -9 527 239 51 14 chr17 24995909 24996047 -60442433 + MIR3 SINE MIR 43 185 -23 317 324 110 0 chr17 24996820 24997009 -60441471 - MIR SINE MIR -21 241 33 1127 147 20 10 chr17 24997939 24998205 -60440275 + L1M4 LINE L1 5176 5443 -737 353 137 0 0 chr17 24998205 24998256 -60440224 - U6 snRNA snRNA -56 51 1 282 102 51 51 chr17 24998256 24998315 -60440165 + L1M4 LINE L1 5428 5486 -688 9743 30 3 156 chr17 24999200 25000834 -60437646 + SVA Other Other 1 1389 0 1815 150 7 29 chr17 25000845 25001151 -60437329 + AluSx SINE Alu 1 299 -13 344 254 92 23 chr17 25001193 25001323 -60437157 - L1ME LINE L1 -514 5607 5469 242 299 35 14 chr17 25001353 25001421 -60437059 - L1ME LINE L1 -743 5403 5338 2415 59 0 0 chr17 25001421 25001726 -60436754 - AluY SINE Alu -6 305 1 242 299 35 14 chr17 25001726 25001801 -60436679 - L1ME LINE L1 -808 5338 5257 1458 115 0 5 chr17 25002375 25002593 -60435887 - AluSq SINE Alu -11 302 86 1964 108 0 69 chr17 25002710 25003044 -60435436 - AluSx SINE Alu -1 311 1 267 295 172 25 chr17 25003342 25003464 -60435016 + L2 LINE L2 3116 3255 -17 2015 143 0 16 chr17 25003465 25003779 -60434701 - AluSx SINE Alu -3 309 1 1733 226 106 40 chr17 25003867 25004366 -60434114 - MER90 LTR ERV1 -7 568 37 472 167 51 0 chr17 25004366 25004444 -60434036 + MER81 DNA DNA 1 82 -32 467 164 0 0 chr17 25004544 25004617 -60433863 - L1M3 LINE L1 -500 5683 5611 743 174 0 29 chr17 25004617 25004755 -60433725 - FRAM SINE Alu -8 168 35 908 114 0 0 chr17 25004756 25004887 -60433593 - L1M3 LINE L1 -565 5606 5476 2067 104 0 49 chr17 25004917 25005245 -60433235 - AluSx SINE Alu 0 312 1 1945 148 0 3 chr17 25005266 25005577 -60432903 - AluSg SINE Alu 0 310 1 299 160 0 0 chr17 25005577 25005627 -60432853 - L1M3 LINE L1 -680 5491 5442 1529 180 221 25 chr17 25005669 25006108 -60432372 + LTR64 LTR ERVK 22 546 -12 1538 183 12 72 chr17 25006111 25006330 -60432150 - L1M3 LINE L1 -729 5449 5218 1852 129 3 7 chr17 25006330 25006617 -60431863 - AluSx SINE Alu -26 286 1 1538 183 12 72 chr17 25006617 25006729 -60431751 - L1M3 LINE L1 -960 5218 5101 1797 133 9 25 chr17 25006729 25007046 -60431434 - AluJb SINE Alu 0 312 1 1538 183 12 72 chr17 25007046 25007266 -60431214 - L1M3 LINE L1 -1077 5101 4945 911 211 36 10 chr17 25007266 25007460 -60431020 - MER63B DNA MER1_type -237 199 1 2157 112 0 3 chr17 25007673 25007977 -60430503 - AluSq SINE Alu -10 303 1 1033 270 26 45 chr17 25007982 25008067 -60430413 + L1MEc LINE L1 1476 1561 -4835 1142 162 0 0 chr17 25008067 25008240 -60430240 - FAM SINE Alu -2 173 1 1033 270 26 45 chr17 25008240 25008535 -60429945 + L1MEc LINE L1 1561 1849 -4547 1980 108 0 48 chr17 25009345 25009659 -60428821 + AluSx SINE Alu 1 299 -13 2392 74 0 0 chr17 25009868 25010178 -60428302 + AluY SINE Alu 1 310 -1 1846 163 7 0 chr17 25010190 25010496 -60427984 + AluJb SINE Alu 1 308 -4 416 119 0 0 chr17 25010812 25010879 -60427601 - Alu SINE Alu -6 306 240 542 139 59 0 chr17 25010989 25011090 -60427390 - MER82 DNA MER2_type -182 471 365 1615 153 42 39 chr17 25011090 25011397 -60427083 - AluJb SINE Alu -4 308 1 294 274 24 0 chr17 25011398 25011482 -60426998 + LTR67 LTR ERVL 460 545 -12 185 282 146 0 chr17 25011558 25011668 -60426812 + L2 LINE L2 1634 1759 -1555 412 185 85 114 chr17 25011727 25011938 -60426542 + L1MEd LINE L1 940 1144 -4975 316 283 81 67 chr17 25012475 25012660 -60425820 - L1MCa LINE L1 -4233 2193 2003 1954 120 7 0 chr17 25012660 25012943 -60425537 - AluSx SINE Alu -27 285 1 316 283 81 67 chr17 25012943 25012980 -60425500 - L1MCa LINE L1 -4423 2003 1968 3479 244 115 44 chr17 25013002 25013643 -60424837 + HAL1 LINE L1 126 720 -1787 2301 89 3 0 chr17 25013643 25013946 -60424534 - AluSp SINE Alu -9 304 1 3479 244 115 44 chr17 25013946 25014119 -60424361 + HAL1 LINE L1 720 879 -1628 815 137 0 23 chr17 25014119 25014250 -60424230 + FLAM_A SINE Alu 5 132 -1 3479 244 115 44 chr17 25014250 25014801 -60423679 + HAL1 LINE L1 879 1589 -918 1883 117 0 34 chr17 25014802 25015120 -60423360 - AluSq SINE Alu 0 313 1 494 196 70 19 chr17 25015228 25015386 -60423094 - HAL1 LINE L1 -317 2190 2025 373 97 0 5 chr17 25015488 25015549 -60422931 - Alu SINE Alu -257 44 1 262 322 98 87 chr17 25015592 25015971 -60422509 + L2 LINE L2 2859 3241 -31 464 283 50 6 chr17 25015976 25016135 -60422345 + MER117 DNA MER1_type 6 171 -26 275 233 123 0 chr17 25016542 25016615 -60421865 + MIR SINE MIR 63 144 -64 194 158 0 53 chr17 25016615 25016653 -60421827 + MIR SINE MIR 111 146 -62 366 327 94 69 chr17 25016999 25017403 -60421077 - L2 LINE L2 -3 3269 2856 373 195 13 89 chr17 25017466 25017568 -60420912 - L1MEc LINE L1 -3965 2250 2219 736 191 0 0 chr17 25017568 25017694 -60420786 - FLAM_C SINE Alu -7 126 1 373 195 13 89 chr17 25017694 25017795 -60420685 - L1MEc LINE L1 -3996 2219 2112 2000 133 0 0 chr17 25017884 25018177 -60420303 + AluSx SINE Alu 1 293 -19 186 167 0 0 chr17 25018258 25018294 -60420186 + (TA)n Simple_repeat Simple_repeat 2 37 0 24 32 0 0 chr17 25018357 25018388 -60420092 + AT_rich Low_complexity Low_complexity 1 31 0 625 235 132 58 chr17 25019009 25019235 -60419245 - MIR SINE MIR 0 262 15 849 217 63 100 chr17 25019235 25019585 -60418895 + MER102b DNA MER1_type 4 340 -1 625 235 132 58 chr17 25019585 25019601 -60418879 - MIR SINE MIR -247 15 2 2211 104 0 7 chr17 25019905 25020214 -60418266 - AluSx SINE Alu 0 312 6 2329 90 0 3 chr17 25021136 25021446 -60417034 - AluSg SINE Alu -1 309 1 577 131 131 0 chr17 25022020 25022127 -60416353 + AluSq/x SINE Alu 11 131 -182 21 0 0 0 chr17 25022555 25022576 -60415904 + AT_rich Low_complexity Low_complexity 1 21 0 1844 158 3 0 chr17 25022582 25022874 -60415606 + AluJb SINE Alu 1 293 -19 1429 235 118 22 chr17 25022977 25023526 -60414954 + L1MEc LINE L1 1885 2486 -3910 794 188 0 0 chr17 25023526 25023654 -60414826 + FLAM_C SINE Alu 2 129 -14 22 43 0 21 chr17 25023654 25023680 -60414800 + AT_rich Low_complexity Low_complexity 1 27 -19 583 137 128 20 chr17 25023680 25023782 -60414698 - FLAM_C SINE Alu -17 116 4 22 43 0 21 chr17 25023782 25023802 -60414678 + AT_rich Low_complexity Low_complexity 27 46 0 425 242 16 8 chr17 25023805 25023929 -60414551 + L1MEc LINE L1 2431 2555 -3660 1768 117 0 4 chr17 25023931 25024180 -60414300 + AluSx SINE Alu 1 248 -64 1159 210 19 0 chr17 25024222 25024479 -60414001 + L1MEc LINE L1 2547 2808 -3407 365 250 52 0 chr17 25024521 25024637 -60413843 + L1MEc LINE L1 3038 3159 -3056 1147 277 42 69 chr17 25024669 25025174 -60413306 + ERVL LTR ERVL 4917 5407 -357 24 0 0 0 chr17 25025205 25025229 -60413251 + AT_rich Low_complexity Low_complexity 1 24 0 286 246 103 16 chr17 25025358 25025484 -60412996 + ERVL LTR ERVL 5604 5740 -24 8246 153 19 11 chr17 25025684 25027189 -60411291 - L1PA14 LINE L1 -2 6159 4632 2325 87 0 7 chr17 25027189 25027498 -60410982 - AluSp SINE Alu -6 307 1 8246 153 19 11 chr17 25027498 25028244 -60410236 - L1PA14 LINE L1 -1529 4632 3893 271 292 0 0 chr17 25028260 25028308 -60410172 + MLT2B3 LTR ERVL 169 219 -301 191 59 0 29 chr17 25028308 25028342 -60410138 + (CAAAA)n Simple_repeat Simple_repeat 4 36 0 271 292 0 0 chr17 25028342 25028358 -60410122 + MLT2B3 LTR ERVL 218 233 -287 * 4694 166 28 51 chr17 25028344 25028695 -60409785 - MER21B LTR ERV1 -19 844 486 183 80 0 0 chr17 25028695 25028720 -60409760 + (TTTA)n Simple_repeat Simple_repeat 1 25 0 4694 166 28 51 chr17 25028720 25028765 -60409715 - MER21B LTR ERV1 -377 486 441 1598 177 0 3 chr17 25028765 25029048 -60409432 + AluJb SINE Alu 1 282 -30 182 61 0 30 chr17 25029048 25029081 -60409399 + (TTAAA)n Simple_repeat Simple_repeat 4 35 0 4694 166 28 51 chr17 25029081 25029546 -60408934 - MER21B LTR ERV1 -420 443 1 786 227 10 63 chr17 25029563 25029770 -60408710 + MLT2B3 LTR ERVL 225 420 -134 1041 191 0 6 chr17 25029772 25029950 -60408530 - MER4E LTR ERV1 -1 778 602 2121 108 20 0 chr17 25029958 25030263 -60408217 + AluSx SINE Alu 1 311 -1 1183 166 0 20 chr17 25030265 25030464 -60408016 - MER4E LTR ERV1 -584 195 1 299 156 0 0 chr17 25030464 25030509 -60407971 + MLT2B2 LTR ERVL 368 412 -103 6703 56 6 45 chr17 25030517 25031510 -60406970 - SVA Other Other 0 1386 433 910 90 20 30 chr17 25031523 25031724 -60406756 - SVA Other Other -592 794 596 198 0 0 0 chr17 25031841 25031863 -60406617 + (A)n Simple_repeat Simple_repeat 1 22 0 1803 140 13 36 chr17 25032503 25032637 -60405843 + AluSx SINE Alu 2 138 -174 2150 105 13 0 chr17 25032637 25032941 -60405539 + AluSx SINE Alu 1 308 -4 1803 140 13 36 chr17 25032941 25033114 -60405366 + AluSx SINE Alu 138 302 -10 2220 75 3 28 chr17 25033116 25033459 -60405021 + AluY SINE Alu 1 311 0 374 220 84 44 chr17 25034097 25034359 -60404121 + L1ME3A LINE L1 5667 5951 -219 23 33 0 0 chr17 25034553 25034583 -60403897 + AT_rich Low_complexity Low_complexity 1 30 0 2290 82 0 0 chr17 25034583 25034875 -60403605 - AluSx SINE Alu -20 292 1 1302 154 58 8 chr17 25034901 25035141 -60403339 - AluJb SINE Alu -60 252 1 1936 107 46 0 chr17 25035167 25035447 -60403033 + AluSg SINE Alu 1 293 -17 197 171 0 0 chr17 25035778 25035813 -60402667 + MIR SINE MIR 91 125 -83 1003 171 0 102 chr17 25036427 25036574 -60401906 + AluJb SINE Alu 1 115 -197 2278 90 0 3 chr17 25036574 25036875 -60401605 + AluSq SINE Alu 2 301 -12 1003 171 0 102 chr17 25036875 25036972 -60401508 + AluJb SINE Alu 115 220 -92 443 177 49 21 chr17 25036972 25037136 -60401344 + AluJ SINE Alu 86 302 -10 216 239 83 55 chr17 25037163 25037224 -60401256 + MIR SINE MIR 145 214 -48 2141 99 0 7 chr17 25037224 25037531 -60400949 + AluY SINE Alu 1 303 -8 216 239 83 55 chr17 25037531 25037576 -60400904 + MIR SINE MIR 214 256 -6 815 143 0 0 chr17 25038673 25038792 -60399688 + AluJb SINE Alu 14 132 -180 1670 67 5 0 chr17 25038795 25039004 -60399476 + AluSp SINE Alu 60 269 -44 2358 87 0 3 chr17 25039107 25039417 -60399063 - AluSq SINE Alu -4 309 1 493 306 34 0 chr17 25039567 25039714 -60398766 + MIR SINE MIR 4 155 -107 1154 278 100 32 chr17 25039719 25039828 -60398652 - L2 LINE L2 -1 3312 3212 2255 99 16 0 chr17 25039828 25040132 -60398348 + AluSq SINE Alu 1 309 -4 1154 278 100 32 chr17 25040132 25040568 -60397912 - L2 LINE L2 -101 3212 2735 831 279 67 39 chr17 25040573 25041111 -60397369 - L1MC5 LINE L1 -262 7699 7260 875 175 0 0 chr17 25041184 25041338 -60397142 - AluJo/FRAM SINE Alu -6 306 153 1968 144 3 0 chr17 25041339 25041638 -60396842 + AluSx SINE Alu 1 300 -12 2092 110 0 3 chr17 25041645 25041936 -60396544 + AluSx SINE Alu 5 294 -18 2185 89 0 10 chr17 25041939 25042232 -60396248 + AluSg SINE Alu 1 290 -20 1078 103 29 29 chr17 25042235 25042409 -60396071 + AluSg/x SINE Alu 135 308 -2 2099 112 0 0 chr17 25042562 25042849 -60395631 + AluSq SINE Alu 1 287 -26 24 32 0 0 chr17 25042849 25042880 -60395600 + AT_rich Low_complexity Low_complexity 1 31 0 959 177 25 20 chr17 25042936 25043000 -60395480 - MER3 DNA MER1_type 0 209 147 2002 74 70 0 chr17 25043000 25043270 -60395210 + AluSp SINE Alu 1 289 -24 212 0 36 0 chr17 25043270 25043298 -60395182 + (TTAAA)n Simple_repeat Simple_repeat 3 31 0 959 177 25 20 chr17 25043298 25043311 -60395169 - MER3 DNA MER1_type -62 147 136 2293 81 0 3 chr17 25043311 25043607 -60394873 + AluSx SINE Alu 1 295 -17 959 177 25 20 chr17 25043607 25043730 -60394750 - MER3 DNA MER1_type -73 136 6 21 0 0 0 chr17 25045256 25045277 -60393203 + GC_rich Low_complexity Low_complexity 1 21 0 2280 81 7 0 chr17 25045800 25046097 -60392383 - AluSp SINE Alu -14 299 1 2097 101 0 3 chr17 25046350 25046638 -60391842 + AluSx SINE Alu 1 287 -25 3750 156 35 16 chr17 25047511 25048192 -60390288 + L1MB2 LINE L1 5478 6171 0 255 373 100 31 chr17 25048568 25049013 -60389467 - L2 LINE L2 0 3272 2793 2125 82 0 7 chr17 25049078 25049391 -60389089 + AluSc SINE Alu 1 311 0 242 287 129 30 chr17 25050552 25050653 -60387827 + MIR3 SINE MIR 11 121 -87 207 0 0 0 chr17 25050725 25050748 -60387732 + (T)n Simple_repeat Simple_repeat 1 23 0 292 304 54 16 chr17 25051452 25051636 -60386844 + L2 LINE L2 2902 3092 -180 317 295 201 0 chr17 25051655 25051804 -60386676 + MIR SINE MIR 82 260 -2 190 333 70 0 chr17 25051834 25051891 -60386589 + L2 LINE L2 3241 3301 -12 437 62 15 0 chr17 25051894 25051959 -60386521 + (TGGA)n Simple_repeat Simple_repeat 1 66 0 223 289 156 11 chr17 25053578 25053668 -60384812 - MIR SINE MIR -76 186 84 532 264 35 7 chr17 25053668 25053812 -60384668 - MER69A DNA AcHobo -3 174 27 237 212 58 0 chr17 25054236 25054321 -60384159 - MIR SINE MIR -76 132 41 1021 275 193 41 chr17 25054449 25055311 -60383169 + L2 LINE L2 1584 2576 -738 890 110 7 29 chr17 25055355 25055491 -60382989 + FLAM_C SINE Alu 1 133 0 611 277 167 16 chr17 25055495 25055942 -60382538 + L2 LINE L2 2736 3301 -12 2131 115 0 10 chr17 25055943 25056247 -60382233 + AluSx SINE Alu 1 301 -11 2508 52 0 3 chr17 25056255 25056561 -60381919 - AluY SINE Alu -6 305 1 473 264 30 100 chr17 25056730 25056836 -60381644 - MIR SINE MIR 0 262 179 2412 73 0 0 chr17 25056836 25057136 -60381344 + AluSx SINE Alu 1 300 -12 473 264 30 100 chr17 25057136 25057260 -60381220 - MIR SINE MIR -83 179 48 351 358 85 20 chr17 25057413 25057706 -60380774 - L2 LINE L2 -70 3202 2891 340 281 116 39 chr17 25057976 25058024 -60380456 - L2 LINE L2 -234 3079 3036 1632 139 19 4 chr17 25058024 25058283 -60380197 + AluJo SINE Alu 29 291 -21 340 281 116 39 chr17 25058283 25058539 -60379941 - L2 LINE L2 -277 3036 2759 1326 190 10 68 chr17 25058798 25058933 -60379547 + AluJb SINE Alu 1 142 -170 2198 99 3 0 chr17 25058933 25059227 -60379253 + AluSx SINE Alu 1 295 -17 1326 190 10 68 chr17 25059227 25059401 -60379079 + AluJb SINE Alu 142 292 -20 246 276 82 20 chr17 25059557 25059749 -60378731 + MIR SINE MIR 1 248 -14 1121 194 92 46 chr17 25060451 25060821 -60377659 - MER89 LTR ERV1 -72 487 1 561 198 9 0 chr17 25060881 25060987 -60377493 - FLAM_A SINE Alu -3 139 33 1727 145 11 11 chr17 25061065 25061246 -60377234 - AluSx SINE Alu 0 311 128 291 28 0 0 chr17 25061246 25061282 -60377198 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 1727 145 11 11 chr17 25061282 25061411 -60377069 - AluSx SINE Alu -182 129 1 655 135 57 35 chr17 25061414 25061555 -60376925 + Charlie4 DNA MER1_type 1817 1960 -1 234 274 8 97 chr17 25061633 25061757 -60376723 + L2 LINE L2 2694 2806 -508 1873 136 0 30 chr17 25062405 25062706 -60375774 + AluJo SINE Alu 1 292 -20 341 293 40 0 chr17 25062730 25062829 -60375651 - MIR SINE MIR -58 204 102 283 83 133 17 chr17 25062874 25062934 -60375546 - MIR SINE MIR -148 114 48 684 317 99 32 chr17 25063112 25063866 -60374614 - L2 LINE L2 -3 3310 2500 751 244 97 74 chr17 25064733 25064764 -60373716 - Charlie4a DNA MER1_type -1515 446 417 1561 161 9 64 chr17 25064764 25065093 -60373387 + AluJo SINE Alu 1 311 -1 751 244 97 74 chr17 25065093 25065495 -60372985 - Charlie4a DNA MER1_type -1544 417 3 1871 144 0 13 chr17 25065851 25066157 -60372323 - AluJb SINE Alu -10 302 1 184 313 109 34 chr17 25066158 25066305 -60372175 - MIR SINE MIR -103 159 2 333 290 71 44 chr17 25066395 25066578 -60371902 + MIR SINE MIR 59 246 -16 296 168 70 16 chr17 25066918 25067005 -60371475 + MER91B DNA MER1_type 8 104 -36 265 291 179 34 chr17 25067031 25067210 -60371270 + MIR SINE MIR 45 249 -13 213 205 72 48 chr17 25067673 25067756 -60370724 + MER91C DNA MER1_type 31 115 -25 1076 156 56 0 chr17 25068708 25068887 -60369593 - MER5A DNA MER1_type 0 189 1 2035 122 0 0 chr17 25069052 25069340 -60369140 + AluJb SINE Alu 1 288 -24 21 0 0 0 chr17 25069341 25069362 -60369118 + AT_rich Low_complexity Low_complexity 1 21 0 300 233 0 0 chr17 25070130 25070190 -60368290 - MER81 DNA DNA -54 60 1 209 229 171 7 chr17 25071078 25071190 -60367290 - MIR SINE MIR -99 163 30 518 331 97 30 chr17 25071254 25071695 -60366785 - L2 LINE L2 -15 3257 2790 379 322 26 7 chr17 25071705 25071857 -60366623 + MER117 DNA MER1_type 1 155 -42 215 337 41 41 chr17 25072044 25072142 -60366338 - L2 LINE L2 -46 3226 3129 192 278 56 56 chr17 25073235 25073343 -60365137 - MIR SINE MIR -59 149 42 221 259 17 0 chr17 25076518 25076576 -60361904 + (TG)n Simple_repeat Simple_repeat 1 59 0 191 266 127 0 chr17 25078755 25078834 -60359646 + L2 LINE L2 3187 3275 -38 213 247 96 0 chr17 25078948 25079021 -60359459 + MIR3 SINE MIR 81 160 -48 330 310 6 6 chr17 25079620 25079791 -60358689 + (CA)n Simple_repeat Simple_repeat 2 172 0 792 287 65 7 chr17 25081305 25081811 -60356669 - L1P LINE L1 -722 5429 4903 1270 132 35 40 chr17 25081883 25082110 -60356370 + AluJo SINE Alu 74 299 -13 580 294 48 91 chr17 25082165 25082475 -60356005 - L1M4 LINE L1 -1300 4846 4524 668 165 47 24 chr17 25082475 25082602 -60355878 - FLAM_C SINE Alu -3 130 1 580 294 48 91 chr17 25082602 25082816 -60355664 - L1M4 LINE L1 -1622 4524 4363 1809 141 22 22 chr17 25082816 25083128 -60355352 - AluJb SINE Alu 0 312 1 580 294 48 91 chr17 25083128 25083368 -60355112 - L1M4 LINE L1 -1783 4363 4114 611 233 75 0 chr17 25083727 25083886 -60354594 - MIR SINE MIR -14 248 78 339 358 0 39 chr17 25088251 25088506 -60349974 + C-rich Low_complexity Low_complexity 1 245 0 525 204 0 0 chr17 25089331 25089478 -60349002 + (CA)n Simple_repeat Simple_repeat 2 148 0 468 51 0 0 chr17 25089619 25089678 -60348802 + (CA)n Simple_repeat Simple_repeat 2 60 0 210 320 0 40 chr17 25090153 25090228 -60348252 + MIR3 SINE MIR 116 187 -21 193 280 0 67 chr17 25090693 25090768 -60347712 - MIR SINE MIR -70 192 123 572 189 104 0 chr17 25091565 25091671 -60346809 + FLAM_A SINE Alu 4 120 -13 1524 140 0 0 chr17 25092134 25092362 -60346118 + AluSg/x SINE Alu 83 310 0 24 32 0 0 chr17 25092438 25092469 -60346011 + AT_rich Low_complexity Low_complexity 1 31 0 243 259 0 0 chr17 25092495 25092607 -60345873 + (TCCA)n Simple_repeat Simple_repeat 1 112 0 589 238 55 24 chr17 25094005 25094169 -60344311 + MIR SINE MIR 4 172 -90 291 292 0 11 chr17 25097335 25097424 -60341056 - MIR3 SINE MIR -43 165 78 342 236 264 0 chr17 25097852 25097962 -60340518 + MIR3 SINE MIR 27 165 -43 830 225 52 66 chr17 25097973 25098186 -60340294 + MER63A DNA MER1_type 1 210 0 1068 133 13 0 chr17 25098248 25098406 -60340074 + FRAM SINE Alu 1 160 -16 584 251 116 37 chr17 25099050 25099265 -60339215 - MIR SINE MIR 0 262 31 229 163 0 61 chr17 25099414 25099463 -60339017 + MIR SINE MIR 81 126 -82 741 285 24 40 chr17 25100082 25100331 -60338149 - MIR SINE MIR -11 251 7 218 294 29 0 chr17 25100810 25100878 -60337602 + MIR SINE MIR 81 150 -112 473 296 128 5 chr17 25101120 25101323 -60337157 + MIR SINE MIR 21 248 -14 2054 130 7 0 chr17 25101430 25101738 -60336742 + AluSx SINE Alu 1 310 -2 1238 119 0 0 chr17 25101739 25101916 -60336564 + AluSg/x SINE Alu 119 295 -15 558 310 150 0 chr17 25101945 25102171 -60336309 - MIR SINE MIR 0 262 3 341 306 28 28 chr17 25102187 25102331 -60336149 - MIR3 SINE MIR -6 202 59 453 76 0 0 chr17 25102830 25102896 -60335584 + (TC)n Simple_repeat Simple_repeat 1 66 0 325 245 132 19 chr17 25104575 25104681 -60333799 + MIR SINE MIR 79 196 -66 523 304 23 18 chr17 25105012 25105183 -60333297 - MIR SINE MIR -34 228 57 525 210 42 8 chr17 25105247 25105366 -60333114 + MIR3 SINE MIR 77 199 -9 253 244 13 14 chr17 25106106 25106196 -60332284 + MIR SINE MIR 42 131 -77 198 247 32 108 chr17 25108419 25108512 -60329968 + L3 LINE CR1 1487 1572 -5 345 269 19 9 chr17 25108974 25109082 -60329398 + MIR SINE MIR 33 141 -67 1219 90 6 0 chr17 25109093 25109260 -60329220 + L1PA7 LINE L1 5987 6154 0 194 267 160 0 chr17 25109317 25109392 -60329088 + MIR SINE MIR 170 256 -6 635 250 174 1 chr17 25109440 25109635 -60328845 - MIR SINE MIR 0 262 36 195 333 0 0 chr17 25110093 25110156 -60328324 - MIR SINE MIR -82 126 64 434 317 48 0 chr17 25111488 25111633 -60326847 + MIR3 SINE MIR 38 189 -19 2091 105 27 3 chr17 25114531 25114827 -60323653 + AluSx SINE Alu 1 303 -9 469 325 128 5 chr17 25115375 25115563 -60322917 - MIR SINE MIR -10 252 42 297 245 106 66 chr17 25115940 25116091 -60322389 - MIR3 SINE MIR -31 177 21 400 136 0 0 chr17 25117407 25117472 -60321008 + Tigger5 DNA MER2_type 14 78 -2245 383 155 14 0 chr17 25117472 25117543 -60320937 - Tigger5 DNA MER2_type -3 2320 2249 466 156 0 0 chr17 25117544 25117621 -60320859 + Tigger5 DNA MER2_type 2247 2323 0 2252 89 0 13 chr17 25118636 25118939 -60319541 + AluSx SINE Alu 1 299 -13 2136 128 0 0 chr17 25118952 25119248 -60319232 + AluSx SINE Alu 1 296 -16 306 0 0 0 chr17 25119809 25119843 -60318637 + (TG)n Simple_repeat Simple_repeat 1 34 0 297 0 0 0 chr17 25119842 25119875 -60318605 + (GA)n Simple_repeat Simple_repeat 1 33 0 * 1265 198 0 5 chr17 25120066 25120288 -60318192 - AluJo SINE Alu -91 221 1 784 197 39 30 chr17 25120363 25120596 -60317884 + Charlie4 DNA MER1_type 1 235 -1726 297 0 0 0 chr17 25120598 25121219 -60317261 + (TA)n Simple_repeat Simple_repeat 1 621 0 1839 149 34 40 chr17 25120628 25120896 -60317584 - MER7A DNA MER2_type -2693 345 77 1958 135 0 3 chr17 25120896 25121185 -60317295 + AluSx SINE Alu 1 288 -24 297 0 0 0 chr17 25121186 25121219 -60317261 + (TA)n Simple_repeat Simple_repeat 2 34 0 1839 149 34 40 chr17 25121219 25121297 -60317183 - MER7A DNA MER2_type -2960 78 1 1425 141 98 14 chr17 25121333 25121610 -60316870 + MER2 DNA MER2_type 29 328 -17 2158 100 0 0 chr17 25121651 25121970 -60316510 + AluSc SINE Alu 1 319 0 1660 143 33 18 chr17 25122079 25122351 -60316129 + AluJo SINE Alu 21 296 -16 2001 87 6 90 chr17 25122618 25122952 -60315528 + AluSx SINE Alu 1 306 -6 429 360 91 16 chr17 25123843 25124285 -60314195 + L2 LINE L2 2183 2657 -657 774 187 157 10 chr17 25124302 25124500 -60313980 + MIR SINE MIR 34 260 -2 492 169 0 0 chr17 25124665 25124736 -60313744 + AluJ/FLAM SINE Alu 14 84 -228 262 275 96 19 chr17 25124777 25124952 -60313528 + L2 LINE L2 2909 3099 -173 216 162 0 0 chr17 25127008 25127045 -60311435 + C-rich Low_complexity Low_complexity 4 40 0 184 330 38 47 chr17 25128069 25128175 -60310305 + MIR SINE MIR 36 140 -68 250 339 33 25 chr17 25129393 25129514 -60308966 - L3b LINE CR1 -168 1415 1294 190 296 0 0 chr17 25129951 25130005 -60308475 - L3b LINE CR1 -191 1392 1339 770 218 67 5 chr17 25130565 25130758 -60307722 - MIR SINE MIR -48 214 10 23 0 0 0 chr17 25131702 25131725 -60306755 + GC_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr17 25131732 25131753 -60306727 + GC_rich Low_complexity Low_complexity 1 21 0 434 287 189 10 chr17 25131963 25132259 -60306221 + L2 LINE L2 2953 3301 -12 632 298 77 10 chr17 25132470 25132694 -60305786 - MIR SINE MIR -6 256 18 333 0 0 0 chr17 25132703 25132740 -60305740 + (CA)n Simple_repeat Simple_repeat 2 38 0 549 241 36 24 chr17 25134514 25134680 -60303800 - MER117 DNA MER1_type -19 178 11 2240 88 0 3 chr17 25134752 25135047 -60303433 + AluSg1 SINE Alu 1 294 -15 200 205 0 0 chr17 25136075 25136114 -60302366 + MIR SINE MIR 46 84 -124 446 342 103 24 chr17 25136272 25136602 -60301878 + L2 LINE L2 2618 2973 -341 220 217 0 0 chr17 25136618 25136664 -60301816 + L2 LINE L2 3227 3272 0 1755 185 10 3 chr17 25137092 25137384 -60301096 + AluJo SINE Alu 4 297 -15 2224 90 10 0 chr17 25138050 25138338 -60300142 - AluSc SINE Alu -18 291 1 1001 108 7 0 chr17 25138417 25138556 -60299924 + AluSc SINE Alu 2 141 -168 1692 108 4 0 chr17 25138556 25138788 -60299692 + AluSc SINE Alu 72 304 -5 1928 143 13 36 chr17 25139426 25139560 -60298920 + AluSx SINE Alu 2 138 -174 2302 105 13 0 chr17 25139560 25139864 -60298616 + AluSx SINE Alu 1 308 -4 1928 143 13 36 chr17 25139864 25140037 -60298443 + AluSx SINE Alu 138 302 -10 2410 77 3 10 chr17 25140039 25140381 -60298099 + AluY SINE Alu 1 311 0 349 220 84 44 chr17 25141019 25141281 -60297199 + L1ME3A LINE L1 5667 5951 -219 23 33 0 0 chr17 25141475 25141505 -60296975 + AT_rich Low_complexity Low_complexity 1 30 0 2432 82 0 0 chr17 25141505 25141797 -60296683 - AluSx SINE Alu -20 292 1 1417 154 58 8 chr17 25141823 25142063 -60296417 - AluJb SINE Alu -60 252 1 2074 107 46 0 chr17 25142089 25142369 -60296111 + AluSg SINE Alu 1 293 -17 199 171 0 0 chr17 25142700 25142735 -60295745 + MIR SINE MIR 91 125 -83 1862 162 0 38 chr17 25143349 25143496 -60294984 + AluJb SINE Alu 1 131 -181 2438 87 0 3 chr17 25143496 25143796 -60294684 + AluSq SINE Alu 2 300 -13 1862 162 0 38 chr17 25143796 25143962 -60294518 + AluJb SINE Alu 131 302 -10 550 253 92 79 chr17 25143965 25144585 -60293895 + L1M4 LINE L1 4032 4659 -1487 1756 149 22 67 chr17 25144671 25144811 -60293669 + AluJo SINE Alu 1 146 -166 2082 127 0 3 chr17 25144811 25145136 -60293344 + AluSx SINE Alu 1 324 0 1756 149 22 67 chr17 25145136 25145309 -60293171 + AluJo SINE Alu 146 301 -11 2260 130 0 9 chr17 25145339 25145654 -60292826 - AluSx SINE Alu 0 312 1 2087 144 3 0 chr17 25145657 25145956 -60292524 - AluSx SINE Alu -12 300 1 934 175 0 0 chr17 25145957 25146111 -60292369 + AluJo/FRAM SINE Alu 153 306 -6 780 247 87 52 chr17 25146297 25146722 -60291758 + L1MC5 LINE L1 7260 7699 -262 1260 278 100 32 chr17 25146729 25147164 -60291316 + L2 LINE L2 2736 3212 -101 2386 96 13 0 chr17 25147164 25147466 -60291014 - AluSx SINE Alu -6 306 1 1260 278 100 32 chr17 25147466 25147575 -60290905 + L2 LINE L2 3212 3312 -1 529 306 34 0 chr17 25147580 25147727 -60290753 - MIR SINE MIR -107 155 4 2460 93 0 3 chr17 25147877 25148188 -60290292 + AluSq SINE Alu 1 310 -3 1981 129 32 29 chr17 25148257 25148566 -60289914 + AluJb SINE Alu 1 310 -2 881 252 117 4 chr17 25148738 25148968 -60289512 + MIR SINE MIR 3 258 -4 2364 100 0 0 chr17 25149292 25149603 -60288877 + AluSx SINE Alu 1 311 -1 704 250 82 26 chr17 25151184 25151416 -60287064 + MIR SINE MIR 17 261 -1 190 143 24 48 chr17 25158063 25158105 -60280375 + L3 LINE CR1 1299 1339 -238 204 67 0 0 chr17 25159379 25159409 -60279071 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 208 0 30 30 chr17 25159452 25159485 -60278995 + (GAAA)n Simple_repeat Simple_repeat 4 36 0 676 313 97 60 chr17 25159485 25160054 -60278426 + L2 LINE L2 1782 2371 -943 1221 216 0 0 chr17 25160131 25160349 -60278131 + MER58A DNA MER1_type 5 222 -2 202 307 50 95 chr17 25161434 25161675 -60276805 + L2 LINE L2 2929 3158 -114 1021 173 13 91 chr17 25162027 25162258 -60276222 - AluJb SINE Alu -15 297 85 207 176 0 0 chr17 25163681 25163715 -60274765 + (CA)n Simple_repeat Simple_repeat 2 35 0 2262 124 3 0 chr17 25165588 25165894 -60272586 - AluSx SINE Alu -5 307 1 685 129 10 0 chr17 25165985 25166086 -60272394 - AluJo SINE Alu -178 134 33 1958 145 0 38 chr17 25166195 25166328 -60272152 + AluJb SINE Alu 1 138 -174 2359 75 7 0 chr17 25166328 25166621 -60271859 + AluSp SINE Alu 1 295 -18 1958 145 0 38 chr17 25166621 25166804 -60271676 + AluJb SINE Alu 138 305 -7 349 267 231 15 chr17 25166804 25166999 -60271481 - L1ME LINE L1 -560 5561 5325 2015 152 10 0 chr17 25167748 25168045 -60270435 - AluSx SINE Alu -12 300 1 1528 196 66 67 chr17 25168101 25168166 -60270314 - Charlie2 DNA MER1_type -103 2759 2695 2427 88 0 0 chr17 25168166 25168462 -60270018 - AluSx SINE Alu -16 296 1 1528 196 66 67 chr17 25168462 25168691 -60269789 - Charlie2 DNA MER1_type -167 2695 2467 1715 196 0 7 chr17 25168691 25168992 -60269488 + AluJb SINE Alu 1 299 -13 1528 196 66 67 chr17 25168992 25169305 -60269175 - Charlie2 DNA MER1_type -395 2467 2150 1952 145 3 3 chr17 25169305 25169588 -60268892 - AluJo SINE Alu -24 288 6 1528 196 66 67 chr17 25169588 25169648 -60268832 - Charlie2 DNA MER1_type -712 2150 2091 2544 79 0 0 chr17 25169652 25169957 -60268523 + AluSg SINE Alu 1 305 -5 968 103 0 81 chr17 25169959 25170133 -60268347 + L1MA2 LINE L1 6145 6304 0 408 233 17 33 chr17 25170215 25170335 -60268145 - Charlie2 DNA MER1_type -2657 125 8 1371 195 96 11 chr17 25170356 25170628 -60267852 - AluJo SINE Alu -7 295 1 211 194 0 0 chr17 25170962 25170998 -60267482 + GA-rich Low_complexity Low_complexity 2 37 0 1623 148 116 25 chr17 25172531 25172815 -60265665 + AluSx SINE Alu 1 310 -2 30 0 0 0 chr17 25172933 25172963 -60265517 + AT_rich Low_complexity Low_complexity 1 30 0 335 313 57 8 chr17 25173025 25173271 -60265209 + HAL1 LINE L1 1122 1379 -1128 22 0 0 0 chr17 25173349 25173371 -60265109 + AT_rich Low_complexity Low_complexity 1 22 0 2550 66 0 0 chr17 25173377 25173679 -60264801 + AluY SINE Alu 1 302 -9 1076 169 0 0 chr17 25173881 25174041 -60264439 + FRAM SINE Alu 5 164 -12 2263 118 0 0 chr17 25174045 25174349 -60264131 + AluSg SINE Alu 5 308 -2 2279 108 0 3 chr17 25174529 25174824 -60263656 + AluSx SINE Alu 1 294 -18 2313 89 0 10 chr17 25174827 25175120 -60263360 + AluSg SINE Alu 1 290 -20 1151 103 29 29 chr17 25175123 25175297 -60263183 + AluSg/x SINE Alu 135 308 -2 2218 112 0 0 chr17 25175449 25175736 -60262744 + AluSq SINE Alu 1 287 -26 24 32 0 0 chr17 25175736 25175767 -60262713 + AT_rich Low_complexity Low_complexity 1 31 0 956 177 25 20 chr17 25175823 25175887 -60262593 - MER3 DNA MER1_type 0 209 147 2119 74 70 0 chr17 25175887 25176157 -60262323 + AluSp SINE Alu 1 289 -24 212 0 36 0 chr17 25176157 25176185 -60262295 + (TTAAA)n Simple_repeat Simple_repeat 3 31 0 956 177 25 20 chr17 25176185 25176198 -60262282 - MER3 DNA MER1_type -62 147 136 2420 81 0 3 chr17 25176198 25176494 -60261986 + AluSx SINE Alu 1 295 -17 956 177 25 20 chr17 25176494 25176617 -60261863 - MER3 DNA MER1_type -73 136 6 21 0 0 0 chr17 25178143 25178164 -60260316 + GC_rich Low_complexity Low_complexity 1 21 0 667 264 35 25 chr17 25178633 25178830 -60259650 - MIR SINE MIR -2 260 62 1082 126 53 80 chr17 25179087 25179233 -60259247 + MER33 DNA MER1_type 2 150 -2435 1482 132 87 56 chr17 25179233 25179363 -60259117 + AluJo SINE Alu 2 126 -186 2412 71 3 3 chr17 25179363 25179659 -60258821 + AluSx SINE Alu 1 296 -16 1482 132 87 56 chr17 25179659 25179815 -60258665 + AluJo SINE Alu 126 297 -15 1082 126 53 80 chr17 25179815 25179904 -60258576 + MER33 DNA MER1_type 150 240 -2345 1922 152 28 0 chr17 25179904 25180187 -60258293 - AluJo SINE Alu -21 291 1 2189 128 3 6 chr17 25180196 25180508 -60257972 - AluSx SINE Alu -1 311 1 1082 126 53 80 chr17 25180508 25180562 -60257918 + MER33 DNA MER1_type 248 294 -30 1533 143 8 13 chr17 25180583 25180821 -60257659 - AluJb SINE Alu -75 237 1 21 0 0 0 chr17 25180821 25180842 -60257638 + AT_rich Low_complexity Low_complexity 1 21 0 228 68 0 114 chr17 25181110 25181154 -60257326 - AluSx SINE Alu -8 292 254 1213 145 0 12 chr17 25181154 25181326 -60257154 - AluSx SINE Alu -142 170 1 455 145 58 0 chr17 25181326 25181395 -60257085 - AluJ/FRAM SINE Alu -17 295 223 441 127 0 0 chr17 25181409 25181472 -60257008 - U4 snRNA snRNA -82 63 1 519 161 49 0 chr17 25181487 25181568 -60256912 - AluJ/FLAM SINE Alu -225 87 3 2135 127 10 0 chr17 25181661 25181953 -60256527 - AluSx SINE Alu -17 295 1 2068 89 34 14 chr17 25181961 25182253 -60256227 - AluSg SINE Alu -12 298 1 29 0 0 0 chr17 25182256 25182285 -60256195 + AT_rich Low_complexity Low_complexity 1 29 0 244 233 0 0 chr17 25182473 25182533 -60255947 + T-rich Low_complexity Low_complexity 1 60 0 6783 68 14 26 chr17 25182540 25184370 -60254110 - SVA Other Other -799 1382 5 243 0 0 0 chr17 25184398 25184425 -60254055 + (GGGAGA)n Simple_repeat Simple_repeat 5 31 0 644 156 0 0 chr17 25184449 25184558 -60253922 - AluSp/q SINE Alu -3 310 202 2058 105 11 11 chr17 25184597 25184874 -60253606 - AluSp SINE Alu -19 294 18 2411 75 0 3 chr17 25184877 25185171 -60253309 - AluSc SINE Alu -16 293 1 1457 185 47 37 chr17 25185174 25185472 -60253008 - AluJo SINE Alu -11 301 1 2214 103 0 73 chr17 25185868 25186197 -60252283 + AluSq SINE Alu 1 305 -8 738 200 8 0 chr17 25186205 25186335 -60252145 + FLAM_C SINE Alu 1 131 -2 28 0 0 0 chr17 25186375 25186403 -60252077 + AT_rich Low_complexity Low_complexity 1 28 0 289 267 40 80 chr17 25186452 25186528 -60251952 - MIR SINE MIR -61 147 85 2337 105 0 0 chr17 25186528 25186832 -60251648 + AluSx SINE Alu 3 306 -6 289 267 40 80 chr17 25186832 25186905 -60251575 - MIR SINE MIR -123 85 11 1980 146 7 7 chr17 25187423 25187718 -60250762 - AluSx SINE Alu -16 296 2 1880 126 15 7 chr17 25188096 25188367 -60250113 - AluSx SINE Alu -2 310 38 682 102 0 10 chr17 25188731 25188829 -60249651 + AluSg/x SINE Alu 210 306 -3 2212 113 3 17 chr17 25188830 25189132 -60249348 + AluSx SINE Alu 1 298 -14 21 0 0 0 chr17 25191244 25191265 -60247215 + AT_rich Low_complexity Low_complexity 1 21 0 215 79 26 0 chr17 25193771 25193809 -60244671 + (TA)n Simple_repeat Simple_repeat 2 40 0 189 219 0 24 chr17 25194429 25194470 -60244010 - L2 LINE L2 -84 3229 3190 1086 141 0 25 chr17 25196825 25196988 -60241492 - AluSg/x SINE Alu -14 298 140 2394 101 3 0 chr17 25196990 25197296 -60241184 - AluSx SINE Alu -5 307 1 1354 199 132 0 chr17 25197307 25197579 -60240901 - AluSx SINE Alu -4 308 1 23 0 0 0 chr17 25197585 25197608 -60240872 + AT_rich Low_complexity Low_complexity 1 23 0 889 94 0 65 chr17 25198407 25198545 -60239935 + FLAM_C SINE Alu 2 130 -3 2464 75 3 0 chr17 25201858 25202165 -60236315 + AluSg SINE Alu 1 308 -2 298 311 101 20 chr17 25202248 25202429 -60236051 - MIR3 SINE MIR -54 208 3 313 267 280 33 chr17 25203968 25204118 -60234362 + MIR SINE MIR 4 190 -72 2520 94 0 0 chr17 25204119 25204472 -60234008 + AluSc SINE Alu 1 353 0 426 306 95 70 chr17 25204481 25204830 -60233650 + L2 LINE L2 2215 2554 -718 2280 101 10 0 chr17 25204830 25205126 -60233354 - AluSq SINE Alu -14 299 1 426 306 95 70 chr17 25205126 25205432 -60233048 + L2 LINE L2 2554 2896 -376 5129 141 45 20 chr17 25205432 25206274 -60232206 + MER21B LTR ERV1 1 863 0 426 306 95 70 chr17 25206274 25206436 -60232044 + L2 LINE L2 2896 3053 -219 2332 73 28 3 chr17 25206474 25206762 -60231718 - AluY SINE Alu -16 295 1 1542 126 0 27 chr17 25206798 25207020 -60231460 - AluSq SINE Alu -93 220 5 2154 122 0 3 chr17 25207716 25208012 -60230468 + AluSg SINE Alu 1 295 -15 717 186 34 0 chr17 25208148 25208266 -60230214 - FLAM_A SINE Alu -15 127 6 289 141 0 94 chr17 25208273 25208363 -60230117 - AluJb SINE Alu 0 302 236 2020 125 3 24 chr17 25208363 25208520 -60229960 - AluSg SINE Alu -21 289 130 275 0 29 0 chr17 25208520 25208555 -60229925 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 2113 122 3 3 chr17 25208555 25208842 -60229638 - AluSq SINE Alu -26 287 1 2020 125 3 24 chr17 25208842 25208978 -60229502 - AluSg SINE Alu -178 132 1 1616 158 0 8 chr17 25208980 25209221 -60229259 - AluJb SINE Alu -67 245 7 1960 150 0 7 chr17 25209229 25209522 -60228958 - AluJb SINE Alu -21 291 1 2149 132 0 19 chr17 25209529 25209847 -60228633 - AluSx SINE Alu 0 312 1 1586 189 43 53 chr17 25210120 25210496 -60227984 + MLT1A2 LTR MaLR 3 374 0 1951 183 34 8 chr17 25211484 25211840 -60226640 + MLT1A1 LTR MaLR 1 365 0 189 0 0 0 chr17 25211903 25211924 -60226556 + (TCCCC)n Simple_repeat Simple_repeat 1 21 0 188 381 114 38 chr17 25214897 25215002 -60223478 + L2 LINE L2 3141 3253 -19 541 179 58 80 chr17 25215499 25215723 -60222757 + L1MC5 LINE L1 7691 7909 -52 818 149 7 64 chr17 25215820 25215961 -60222519 + FLAM_C SINE Alu 1 133 0 891 154 0 0 chr17 25216724 25216867 -60221613 - AluSg/x SINE Alu -1 311 169 286 266 13 0 chr17 25217911 25217990 -60220490 - MER116 DNA Mariner 0 80 1 224 311 151 25 chr17 25218117 25218236 -60220244 - L2 LINE L2 0 3272 3139 25 23 0 23 chr17 25219148 25219176 -60219304 + AT_rich Low_complexity Low_complexity 1 29 -13 2213 99 3 3 chr17 25219176 25219470 -60219010 + AluSg SINE Alu 1 294 -16 25 23 0 23 chr17 25219470 25219484 -60218996 + AT_rich Low_complexity Low_complexity 29 42 0 389 302 13 44 chr17 25219973 25220115 -60218365 + MIR SINE MIR 20 163 -45 861 211 0 17 chr17 25220118 25220298 -60218182 + MER8 DNA MER2_type 1 177 -62 271 193 105 0 chr17 25220276 25220333 -60218147 + MER2 DNA MER2_type 283 345 0 * 479 105 26 13 chr17 25220333 25220402 -60218078 - Tigger2 DNA MER2_type -2648 70 1 2260 103 0 26 chr17 25220423 25220734 -60217746 + AluSg SINE Alu 1 303 -7 2438 78 0 10 chr17 25221434 25221740 -60216740 + AluY SINE Alu 2 304 -7 204 67 0 0 chr17 25224011 25224041 -60214439 + (CCG)n Simple_repeat Simple_repeat 1 30 0 813 148 0 15 chr17 25224735 25224870 -60213610 - FLAM_A SINE Alu 0 133 1 2415 96 0 0 chr17 25226352 25226653 -60211827 + AluSx SINE Alu 1 301 -11 634 159 24 14 chr17 25226664 25226916 -60211564 + AluJ SINE Alu 1 303 -9 206 239 83 55 chr17 25226943 25227004 -60211476 + MIR SINE MIR 145 212 -50 2360 88 0 7 chr17 25227004 25227309 -60211171 + AluY SINE Alu 1 303 -8 206 239 83 55 chr17 25227309 25227356 -60211124 + MIR SINE MIR 212 256 -6 1576 174 51 14 chr17 25228453 25228575 -60209905 + AluJb SINE Alu 14 130 -182 2125 67 4 0 chr17 25228575 25228828 -60209652 + AluSp SINE Alu 60 313 0 1576 174 51 14 chr17 25228828 25228980 -60209500 + AluJb SINE Alu 130 298 -14 2387 71 3 0 chr17 25229005 25229315 -60209165 - AluSp SINE Alu 0 311 1 244 101 0 203 chr17 25229532 25229567 -60208913 - FAM SINE Alu -136 179 167 2395 88 0 52 chr17 25229567 25229895 -60208585 + AluSq SINE Alu 1 311 -2 244 101 0 203 chr17 25229895 25229938 -60208542 - FAM SINE Alu -148 167 117 834 255 53 0 chr17 25229939 25230127 -60208353 - AluJo SINE Alu -108 204 7 1810 157 31 7 chr17 25230141 25230427 -60208053 - AluSx SINE Alu -19 293 1 352 307 205 6 chr17 25230519 25230685 -60207795 + MIR SINE MIR 20 218 -44 198 0 0 0 chr17 25230843 25230865 -60207615 + (TG)n Simple_repeat Simple_repeat 2 23 0 6004 160 50 45 chr17 25230867 25231088 -60207392 + L1MC3 LINE L1 6342 6560 -1225 1078 168 12 0 chr17 25231088 25231261 -60207219 + FAM SINE Alu 1 175 0 6004 160 50 45 chr17 25231261 25231367 -60207113 + L1MC3 LINE L1 6560 6664 -1121 2276 112 3 0 chr17 25231367 25231671 -60206809 - AluSg SINE Alu -5 305 1 6004 160 50 45 chr17 25231671 25232594 -60205886 + L1MC3 LINE L1 6664 7603 -182 2144 94 7 17 chr17 25232594 25232918 -60205562 + AluSg SINE Alu 1 310 0 6004 160 50 45 chr17 25232918 25233020 -60205460 + L1MC3 LINE L1 7603 7703 -82 1622 153 76 11 chr17 25233092 25233367 -60205113 + AluJo SINE Alu 1 293 -19 2181 107 3 17 chr17 25233596 25233733 -60204747 + AluSx SINE Alu 1 138 -174 2204 125 0 19 chr17 25233733 25234044 -60204436 + AluSg SINE Alu 1 305 -5 2181 107 3 17 chr17 25234044 25234206 -60204274 + AluSx SINE Alu 138 296 -16 311 114 10 5 chr17 25235214 25235279 -60203201 + Alu SINE Alu 3 45 -263 264 163 41 0 chr17 25235284 25235333 -60203147 - Alu SINE Alu -257 51 1 25 0 0 0 chr17 25235342 25235367 -60203113 + AT_rich Low_complexity Low_complexity 1 25 0 2096 132 3 10 chr17 25235367 25235671 -60202809 + AluSx SINE Alu 1 302 -10 2340 109 0 0 chr17 25236015 25236318 -60202162 + AluSg SINE Alu 6 308 -2 724 169 17 0 chr17 25236330 25236448 -60202032 + FLAM_C SINE Alu 1 120 -13 2002 150 3 0 chr17 25236468 25236761 -60201719 - AluJb SINE Alu -18 294 1 27 29 0 0 chr17 25236761 25236795 -60201685 + AT_rich Low_complexity Low_complexity 1 34 0 1447 179 16 12 chr17 25236797 25237043 -60201437 + AluJb SINE Alu 1 247 -65 6241 54 5 331 chr17 25237316 25239339 -60199141 - SVA Other Other 0 1386 23 193 281 56 22 chr17 25239352 25239441 -60199039 + MER5B DNA MER1_type 85 176 -2 394 211 35 105 chr17 25239565 25239679 -60198801 - MER5A DNA MER1_type -3 186 81 242 316 0 13 chr17 25240034 25240110 -60198370 + L2 LINE L2 3194 3268 -4 180 0 0 0 chr17 25240151 25240171 -60198309 + (A)n Simple_repeat Simple_repeat 1 20 0 568 301 129 10 chr17 25240406 25240615 -60197865 + MIR SINE MIR 21 254 -8 801 136 0 0 chr17 25242896 25243021 -60195459 - FRAM SINE Alu -10 166 42 2007 299 75 30 chr17 25243052 25243293 -60195187 + L2 LINE L2 1865 2094 -1220 2012 106 11 0 chr17 25243293 25243576 -60194904 + AluSx SINE Alu 1 286 -26 2007 299 75 30 chr17 25243576 25244190 -60194290 + L2 LINE L2 2094 2758 -556 267 239 283 18 chr17 25244428 25244541 -60193939 + L2 LINE L2 3159 3301 -12 2032 102 0 24 chr17 25244544 25244839 -60193641 + AluSx SINE Alu 2 289 -23 201 39 0 0 chr17 25244840 25244866 -60193614 + (TATATG)n Simple_repeat Simple_repeat 6 31 0 774 169 0 0 chr17 25244866 25244990 -60193490 + FRAM SINE Alu 29 152 -24 199 224 20 20 chr17 25245013 25245062 -60193418 + L2 LINE L2 2709 2757 -557 814 97 79 0 chr17 25245766 25245880 -60192600 + AluSc SINE Alu 167 289 -20 2234 106 3 0 chr17 25245887 25246199 -60192281 + AluSq SINE Alu 1 313 0 394 343 34 23 chr17 25246630 25246805 -60191675 + MIR SINE MIR 15 191 -71 263 234 31 0 chr17 25247613 25247677 -60190803 - L2 LINE L2 -3 3269 3204 2387 56 7 3 chr17 25247694 25247997 -60190483 - AluSp SINE Alu -9 304 1 300 235 78 61 chr17 25248297 25248412 -60190068 - MIR SINE MIR -75 187 71 694 196 48 12 chr17 25248488 25248656 -60189824 + Charlie1b DNA MER1_type 114 287 -236 2038 108 0 3 chr17 25248661 25248948 -60189532 - AluSx SINE Alu -26 286 1 827 131 25 0 chr17 25248955 25249077 -60189403 - AluSq/x SINE Alu -185 127 3 819 166 61 22 chr17 25249081 25249121 -60189359 + Charlie1b DNA MER1_type 274 311 -2450 1584 120 94 11 chr17 25249121 25249411 -60189069 + AluSx SINE Alu 1 312 0 819 166 61 22 chr17 25249411 25249599 -60188881 + Charlie1b DNA MER1_type 311 511 -12 269 336 50 25 chr17 25250661 25250780 -60187700 - L2 LINE L2 -9 3263 3142 241 222 19 0 chr17 25251043 25251097 -60187383 + (TA)n Simple_repeat Simple_repeat 2 56 0 377 221 58 18 chr17 25251097 25251207 -60187273 - L1MCa LINE L1 -1339 6983 1995 325 294 24 0 chr17 25251132 25251217 -60187263 + L1MC3 LINE L1 6571 6657 -1128 * 322 264 88 57 chr17 25251824 25251983 -60186497 - L2 LINE L2 -1 3312 3149 1604 172 28 3 chr17 25254835 25255120 -60183360 + AluJo SINE Alu 3 294 -18 2018 114 0 39 chr17 25255135 25255279 -60183201 + AluSq SINE Alu 1 128 -185 1991 112 3 36 chr17 25255279 25255584 -60182896 + AluSx SINE Alu 1 295 -17 2018 114 0 39 chr17 25255584 25255746 -60182734 + AluSq SINE Alu 128 295 -18 2212 95 0 3 chr17 25257280 25257576 -60180904 + AluSx SINE Alu 3 297 -15 489 167 0 0 chr17 25257590 25257668 -60180812 + FRAM/FAM SINE Alu 1 77 -99 1738 129 3 32 chr17 25257795 25258106 -60180374 - AluSp SINE Alu -11 302 1 2219 102 0 3 chr17 25258274 25258577 -60179903 - AluSx SINE Alu -10 302 1 29 0 0 0 chr17 25258648 25258677 -60179803 + AT_rich Low_complexity Low_complexity 1 29 0 1185 161 0 22 chr17 25259614 25259837 -60178643 - AluJb SINE Alu -10 302 85 189 0 0 0 chr17 25259839 25259860 -60178620 + (T)n Simple_repeat Simple_repeat 1 21 0 1710 74 22 9 chr17 25259913 25260144 -60178336 - L1PA8 LINE L1 0 6172 5939 744 114 9 0 chr17 25260398 25260512 -60177968 - AluSg/x SINE Alu -5 307 193 2284 53 0 0 chr17 25260616 25260938 -60177542 - AluY SINE Alu 0 322 1 2050 154 15 28 chr17 25260938 25261328 -60177152 - L1 LINE L1 -2218 3928 3544 817 157 8 15 chr17 25261544 25261678 -60176802 + FLAM_C SINE Alu 1 133 0 31 0 0 0 chr17 25261678 25261709 -60176771 + AT_rich Low_complexity Low_complexity 1 31 0 452 249 46 52 chr17 25261726 25261899 -60176581 + AluSc SINE Alu 119 290 -19 993 166 5 27 chr17 25262324 25262341 -60176139 + AluJo SINE Alu 120 136 -176 2273 75 3 0 chr17 25262341 25262635 -60175845 + AluSg SINE Alu 1 295 -15 2398 63 0 3 chr17 25262635 25262937 -60175543 + AluY SINE Alu 1 301 -10 993 166 5 27 chr17 25262937 25263105 -60175375 + AluJo SINE Alu 134 302 -10 1869 166 0 3 chr17 25263108 25263415 -60175065 + AluSx SINE Alu 5 310 -2 1201 184 31 86 chr17 25263512 25263838 -60174642 - AluJo SINE Alu 0 312 5 21 0 0 0 chr17 25263929 25263950 -60174530 + AT_rich Low_complexity Low_complexity 1 21 0 1284 178 33 4 chr17 25264084 25264359 -60174121 + L1MA8 LINE L1 4195 4477 -1669 1929 138 0 10 chr17 25264363 25264668 -60173812 + AluSq SINE Alu 5 306 -7 970 162 67 0 chr17 25264668 25264892 -60173588 + L1MA8 LINE L1 5190 5426 -745 1034 174 0 15 chr17 25264893 25265088 -60173392 + AluJb SINE Alu 121 312 0 3513 136 62 14 chr17 25265094 25265734 -60172746 + L1MA8 LINE L1 5442 6112 -179 290 259 0 0 chr17 25265744 25265802 -60172678 + Tigger3(Golem) DNA MER2_type 22 79 -2950 1693 169 13 0 chr17 25265805 25266107 -60172373 + AluJo SINE Alu 1 306 -6 367 267 12 108 chr17 25266108 25266366 -60172114 + L1ME4a LINE L1 5645 5877 -244 329 188 0 0 chr17 25266483 25266531 -60171949 + AluSp SINE Alu 137 184 -119 268 266 0 0 chr17 25267401 25267465 -60171015 + MIR SINE MIR 161 224 -38 1902 126 27 7 chr17 25267640 25267941 -60170539 - AluSx SINE Alu -5 307 1 339 307 223 37 chr17 25267950 25268246 -60170234 + L3 LINE CR1 1225 1575 -2 217 225 101 80 chr17 25268281 25268419 -60170061 - MIR SINE MIR 0 262 122 1421 170 31 0 chr17 25268439 25268698 -60169782 + AluJo SINE Alu 14 280 -32 1388 195 34 7 chr17 25268754 25269046 -60169434 + AluJo SINE Alu 1 300 -12 182 310 58 11 chr17 25269048 25269135 -60169345 - L2 LINE L2 -190 3123 3033 2146 65 61 0 chr17 25269285 25269562 -60168918 - AluY SINE Alu -17 294 1 2331 83 0 0 chr17 25269618 25269918 -60168562 - AluSc SINE Alu -9 300 1 2229 68 0 39 chr17 25269943 25270254 -60168226 - AluY SINE Alu -12 299 1 1690 164 7 3 chr17 25270259 25270552 -60167928 - AluJo SINE Alu -17 295 2 2238 74 10 0 chr17 25270676 25270974 -60167506 - AluSp SINE Alu -12 301 1 467 320 50 17 chr17 25271267 25271448 -60167032 + L2 LINE L2 1807 1993 -1321 1022 167 4 94 chr17 25271449 25271683 -60166797 - AluJb SINE Alu -14 298 86 571 241 361 4 chr17 25271683 25271957 -60166523 + L2 LINE L2 1981 2352 -962 2222 69 3 13 chr17 25271963 25272267 -60166213 - AluY SINE Alu -10 301 1 914 35 0 17 chr17 25272268 25272383 -60166097 - AluSc SINE Alu -196 113 1 924 232 26 64 chr17 25272409 25272792 -60165688 + L2 LINE L2 2732 3102 -211 271 276 143 66 chr17 25272855 25273051 -60165429 + L2 LINE L2 3093 3303 -10 873 168 52 0 chr17 25273203 25273358 -60165122 - AluSg/x SINE Alu -17 295 133 2059 94 7 3 chr17 25273359 25273656 -60164824 - AluY SINE Alu -13 298 1 335 281 108 42 chr17 25273705 25273872 -60164608 + L1MC4 LINE L1 6613 6790 -1252 1961 120 0 3 chr17 25274187 25274479 -60164001 + AluSg SINE Alu 1 291 -19 2138 73 0 14 chr17 25274560 25274849 -60163631 + AluY SINE Alu 1 285 -26 23 0 0 0 chr17 25274852 25274875 -60163605 + AT_rich Low_complexity Low_complexity 1 23 0 1076 36 0 36 chr17 25275231 25275368 -60163112 + AluY SINE Alu 1 132 -179 2181 103 0 0 chr17 25275403 25275704 -60162776 + AluSg SINE Alu 1 301 -9 2102 106 10 19 chr17 25275982 25276294 -60162186 + AluSq SINE Alu 1 309 -4 2020 119 3 0 chr17 25276308 25276602 -60161878 + AluSx SINE Alu 4 298 -14 213 132 0 0 chr17 25276911 25276949 -60161531 + (T)n Simple_repeat Simple_repeat 1 38 0 673 99 0 11 chr17 25277517 25277608 -60160872 + AluSg/x SINE Alu 71 160 -152 536 167 0 0 chr17 25277710 25277788 -60160692 - AluJ/FLAM SINE Alu -233 79 2 381 281 39 21 chr17 25277792 25277946 -60160534 - MIR SINE MIR -63 145 33 213 65 0 0 chr17 25278246 25278277 -60160203 + (ATG)n Simple_repeat Simple_repeat 2 32 0 2129 87 7 7 chr17 25278281 25278435 -60160045 - AluSq SINE Alu -25 288 132 1866 101 40 34 chr17 25278435 25278732 -60159748 - AluSq SINE Alu -14 299 1 2129 87 7 7 chr17 25278732 25278865 -60159615 - AluSq SINE Alu -180 133 1 2266 55 3 64 chr17 25279629 25279957 -60158523 - AluY SINE Alu -3 308 1 2337 71 10 0 chr17 25280560 25280857 -60157623 - AluSp SINE Alu -13 300 1 1772 181 0 0 chr17 25280974 25281272 -60157208 - AluJo SINE Alu -14 298 1 1960 123 0 30 chr17 25281482 25281784 -60156696 - AluSx SINE Alu -19 293 1 216 0 0 0 chr17 25281813 25281837 -60156643 + (A)n Simple_repeat Simple_repeat 1 24 0 1839 127 14 10 chr17 25281934 25282226 -60156254 - AluSg1 SINE Alu -16 293 1 1894 239 75 102 chr17 25282362 25283569 -60154911 + L1MC4 LINE L1 6730 7903 -139 284 266 0 16 chr17 25283709 25283773 -60154707 - AluJb SINE Alu -61 241 179 * 344 175 63 0 chr17 25283751 25283814 -60154666 + AluJ/FRAM SINE Alu 232 298 -4 1671 151 33 10 chr17 25284139 25284443 -60154037 + AluSx SINE Alu 1 311 -1 186 306 0 0 chr17 25284931 25284980 -60153500 - L3 LINE CR1 -285 1292 1244 1593 149 38 14 chr17 25285043 25285332 -60153148 + AluJb SINE Alu 1 296 -16 2008 95 0 83 chr17 25286536 25286861 -60151619 - AluY SINE Alu -13 298 1 1627 146 33 7 chr17 25288161 25288483 -60149997 - AluJb SINE Alu 0 329 1 440 295 154 53 chr17 25288518 25288952 -60149528 + L3 LINE CR1 1081 1558 -19 2357 57 0 35 chr17 25289884 25290198 -60148282 + AluSg SINE Alu 1 303 -7 184 225 0 25 chr17 25290648 25290728 -60147752 + GA-rich Low_complexity Low_complexity 1 78 0 225 227 45 0 chr17 25291060 25291126 -60147354 + (CCCCAG)n Simple_repeat Simple_repeat 2 70 0 751 127 9 9 chr17 25291842 25291952 -60146528 + AluJb SINE Alu 106 215 -97 189 121 0 0 chr17 25293054 25293087 -60145393 + (A)n Simple_repeat Simple_repeat 1 33 0 1401 120 5 23 chr17 25293101 25293180 -60145300 - AluSx SINE Alu -100 212 133 2245 66 36 10 chr17 25293180 25293483 -60144997 - AluY SINE Alu 0 311 1 1401 120 5 23 chr17 25293483 25293619 -60144861 - AluSx SINE Alu -179 133 1 518 252 69 25 chr17 25295904 25296063 -60142417 + MIR SINE MIR 31 196 -66 210 216 0 59 chr17 25296166 25296217 -60142263 + MIR SINE MIR 215 262 0 21 36 0 0 chr17 25297384 25297412 -60141068 + GC_rich Low_complexity Low_complexity 1 28 0 1841 97 60 7 chr17 25298694 25298993 -60139487 - AluJb SINE Alu 0 313 1 205 232 71 0 chr17 25299008 25299064 -60139416 + MIR SINE MIR 67 126 -82 1173 62 56 0 chr17 25299301 25299462 -60139018 + AluY SINE Alu 142 311 0 2198 84 3 10 chr17 25300740 25301038 -60137442 + AluSp SINE Alu 1 296 -17 1553 186 7 20 chr17 25301578 25301884 -60136596 - AluJb SINE Alu -10 302 1 601 280 102 18 chr17 25301893 25302118 -60136362 - L2 LINE L2 -854 2460 2217 477 289 0 0 chr17 25302118 25302232 -60136248 - L2 LINE L2 -1 3312 3199 560 279 158 0 chr17 25302259 25302449 -60136031 - MIR SINE MIR -3 259 40 184 250 68 57 chr17 25303001 25303089 -60135391 + MIR SINE MIR 64 152 -56 2172 77 0 56 chr17 25303091 25303414 -60135066 + AluY SINE Alu 1 305 -6 211 305 49 0 chr17 25304215 25304297 -60134183 + L2 LINE L2 3104 3189 -83 7641 25 6 0 chr17 25304480 25305919 -60132561 - L1PA4 LINE L1 -1 6154 4709 420 296 41 18 chr17 25307046 25307215 -60131265 - MIR SINE MIR -8 254 82 300 219 16 0 chr17 25308022 25308086 -60130394 - L2 LINE L2 -1 3312 3248 2260 85 3 0 chr17 25308155 25308450 -60130030 - AluSg SINE Alu -14 296 1 298 332 82 69 chr17 25308465 25308712 -60129768 - L2 LINE L2 -20 3252 2999 2220 110 0 0 chr17 25308712 25309013 -60129467 + AluSg SINE Alu 6 306 -4 298 332 82 69 chr17 25309013 25309069 -60129411 - L2 LINE L2 -273 2999 2945 1680 58 0 5 chr17 25311016 25311223 -60127257 + AluY SINE Alu 1 206 -105 334 56 0 0 chr17 25311223 25311277 -60127203 + AluY SINE Alu 249 302 0 521 140 66 88 chr17 25311348 25311484 -60126996 + FLAM_C SINE Alu 1 133 0 2384 90 0 0 chr17 25311495 25311807 -60126673 + AluSx SINE Alu 1 312 0 31 0 0 0 chr17 25313034 25313065 -60125415 + GC_rich Low_complexity Low_complexity 1 31 0 393 287 49 21 chr17 25313398 25313541 -60124939 - MIR SINE MIR -70 192 46 295 224 0 0 chr17 25314320 25314378 -60124102 + AluSp SINE Alu 130 187 -116 21 138 0 0 chr17 25314563 25314592 -60123888 + AT_rich Low_complexity Low_complexity 1 29 0 267 383 74 12 chr17 25319842 25320004 -60118476 + MIR SINE MIR 89 260 -2 790 175 0 0 chr17 25320101 25320227 -60118253 + AluSg/x SINE Alu 166 291 -21 1958 93 34 28 chr17 25320234 25320525 -60117955 + AluSc SINE Alu 1 293 -16 1245 171 156 12 chr17 25320809 25320918 -60117562 + AluSx SINE Alu 1 93 -209 2108 109 0 7 chr17 25320918 25321221 -60117259 + AluSq SINE Alu 1 301 -12 1245 171 156 12 chr17 25321221 25321368 -60117112 + AluSx SINE Alu 93 294 -8 2020 125 14 0 chr17 25321740 25322028 -60116452 + AluSg SINE Alu 1 292 -18 1789 70 4 0 chr17 25322034 25322262 -60116218 + AluY SINE Alu 83 311 0 275 106 0 0 chr17 25322330 25322380 -60116100 + Alu SINE Alu 1 38 -263 198 103 0 0 chr17 25322380 25322409 -60116071 + (TTA)n Simple_repeat Simple_repeat 2 30 0 252 86 0 0 chr17 25322788 25322823 -60115657 + (A)n Simple_repeat Simple_repeat 1 35 0 2050 116 0 30 chr17 25322877 25323178 -60115302 - AluSx SINE Alu -20 292 1 2131 139 3 0 chr17 25323777 25324086 -60114394 - AluSx SINE Alu 0 312 3 1424 183 62 24 chr17 25324087 25324377 -60114103 - AluJo SINE Alu -11 301 1 2196 107 0 3 chr17 25324753 25325052 -60113428 + AluSx SINE Alu 1 298 -14 205 175 0 25 chr17 25329328 25329368 -60109112 + GA-rich Low_complexity Low_complexity 3 41 0 406 353 87 0 chr17 25329502 25329686 -60108794 - MIR SINE MIR -8 254 55 2252 95 0 19 chr17 25329741 25330056 -60108424 + AluSx SINE Alu 2 310 -2 2269 96 0 3 chr17 25331795 25332097 -60106383 + AluSg SINE Alu 2 302 -8 2254 71 3 14 chr17 25332107 25332403 -60106077 + AluSg1 SINE Alu 3 295 -14 352 303 103 18 chr17 25333127 25333292 -60105188 + MIR SINE MIR 84 262 0 1141 119 0 0 chr17 25333585 25333744 -60104736 + AluSg/x SINE Alu 147 305 -7 865 198 6 6 chr17 25333746 25333913 -60104567 + AluJo/FRAM SINE Alu 137 303 -9 2232 101 10 0 chr17 25333916 25334224 -60104256 + AluSp SINE Alu 1 311 -2 1114 188 52 0 chr17 25334713 25334926 -60103554 + MER58A DNA MER1_type 1 224 0 2109 115 7 13 chr17 25335624 25335929 -60102551 + AluSq SINE Alu 1 303 -10 2423 63 0 7 chr17 25336606 25336909 -60101571 - AluSq SINE Alu -12 301 1 1890 136 7 4 chr17 25336919 25337228 -60101252 - AluSx SINE Alu 0 310 1 1725 76 16 24 chr17 25338048 25338299 -60100181 + AluY SINE Alu 55 303 -8 1413 112 0 0 chr17 25338312 25338508 -60099972 - AluSc SINE Alu -113 196 1 456 195 229 8 chr17 25339048 25339166 -60099314 + FRAM SINE Alu 23 166 -10 239 117 39 39 chr17 25342298 25342375 -60096105 + C-rich Low_complexity Low_complexity 3 79 0 204 267 23 23 chr17 25343152 25343238 -60095242 + G-rich Low_complexity Low_complexity 4 89 0 2613 71 0 3 chr17 25343644 25343953 -60094527 - AluSx SINE Alu -4 308 1 444 284 117 19 chr17 25345119 25345383 -60093097 - L2 LINE L2 0 3313 3024 1105 130 0 0 chr17 25345401 25345555 -60092925 - AluSg/x SINE Alu -25 285 132 2204 87 6 37 chr17 25345556 25345878 -60092602 - AluSx SINE Alu 0 312 1 331 329 74 23 chr17 25345879 25346095 -60092385 - L2 LINE L2 -239 3033 2807 1183 126 11 0 chr17 25346136 25346310 -60092170 - AluY SINE Alu -3 308 133 2329 106 0 10 chr17 25346314 25346626 -60091854 - AluSq SINE Alu -4 309 1 1832 158 16 3 chr17 25346630 25346933 -60091547 - AluSq SINE Alu -6 307 1 24 0 0 0 chr17 25347040 25347064 -60091416 + AT_rich Low_complexity Low_complexity 1 24 0 991 252 42 16 chr17 25348045 25348430 -60090050 - L1ME4a LINE L1 -3 6118 5725 2152 135 3 0 chr17 25349608 25349912 -60088568 + AluSx SINE Alu 1 305 -7 2200 124 3 0 chr17 25350360 25350658 -60087822 + AluSx SINE Alu 1 299 -13 2509 70 0 0 chr17 25350684 25350984 -60087496 + AluY SINE Alu 1 300 -11 649 173 0 47 chr17 25351020 25351147 -60087333 + FLAM_A SINE Alu 3 123 -10 2579 44 7 3 chr17 25351157 25351452 -60087028 + AluY SINE Alu 1 296 -15 1180 123 0 0 chr17 25351466 25351620 -60086860 + AluSq SINE Alu 1 154 -159 1329 188 27 41 chr17 25351705 25351837 -60086643 + AluJb SINE Alu 5 137 -165 2553 71 0 0 chr17 25351837 25352134 -60086346 + AluY SINE Alu 3 299 -12 1329 188 27 41 chr17 25352134 25352293 -60086187 + AluJb SINE Alu 137 292 -10 2351 94 0 3 chr17 25352294 25352591 -60085889 + AluSx SINE Alu 1 296 -16 2167 106 10 14 chr17 25353833 25354125 -60084355 + AluSx SINE Alu 1 291 -21 478 205 33 86 chr17 25354315 25354466 -60084014 + MIR3 SINE MIR 60 202 -6 1552 141 27 57 chr17 25355007 25355140 -60083340 + AluJo SINE Alu 11 146 -166 1961 138 35 0 chr17 25355140 25355429 -60083051 + AluSx SINE Alu 1 299 -13 2079 117 38 0 chr17 25355430 25355720 -60082760 + AluSx SINE Alu 1 301 -11 1552 141 27 57 chr17 25355720 25355882 -60082598 + AluJo SINE Alu 145 299 -13 493 322 174 17 chr17 25357847 25358204 -60080276 + L3 LINE CR1 973 1385 -192 369 317 88 29 chr17 25358229 25358469 -60080011 - MIR SINE MIR -2 260 7 264 338 37 22 chr17 25358457 25358593 -60079887 + L3 LINE CR1 1434 1571 -6 * 424 305 86 5 chr17 25361493 25361680 -60076800 + MIR SINE MIR 40 241 -21 279 303 0 0 chr17 25362994 25363070 -60075410 + CT-rich Low_complexity Low_complexity 5 80 0 253 260 16 57 chr17 25364458 25364581 -60073899 + CT-rich Low_complexity Low_complexity 5 122 0 656 279 40 15 chr17 25365384 25365585 -60072895 + MIR SINE MIR 8 213 -49 249 307 89 0 chr17 25365929 25366030 -60072450 - L2 LINE L2 -3 3269 3160 255 157 0 0 chr17 25366032 25366083 -60072397 + G-rich Low_complexity Low_complexity 1 51 0 184 333 103 11 chr17 25367215 25367302 -60071178 + L2 LINE L2 1862 1956 -1358 466 66 0 0 chr17 25367307 25367404 -60071076 - Alu SINE Alu 0 315 219 341 299 17 34 chr17 25367537 25367714 -60070766 + GA-rich Low_complexity Low_complexity 2 175 0 * 372 328 0 53 chr17 25367644 25367833 -60070647 + A-rich Low_complexity Low_complexity 2 180 0 930 198 32 29 chr17 25367894 25368172 -60070308 + AluSx SINE Alu 33 311 -1 697 141 39 8 chr17 25368331 25368459 -60070021 - AluJo SINE Alu -176 136 5 2286 101 10 7 chr17 25368788 25369086 -60069394 - AluSx SINE Alu -13 299 1 2054 141 0 0 chr17 25370472 25370749 -60067731 + AluSx SINE Alu 1 277 -35 180 97 0 0 chr17 25370760 25370791 -60067689 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2416 110 0 0 chr17 25370843 25371153 -60067327 + AluSp SINE Alu 2 311 -2 489 218 45 45 chr17 25371544 25371677 -60066803 - FLAM_A SINE Alu 0 133 1 2236 88 3 36 chr17 25371993 25372298 -60066182 - AluSp SINE Alu -18 295 1 200 292 0 0 chr17 25372576 25372624 -60065856 + GA-rich Low_complexity Low_complexity 3 50 0 198 103 0 0 chr17 25372747 25372776 -60065704 + (GGAAA)n Simple_repeat Simple_repeat 5 33 0 1459 186 33 7 chr17 25372777 25373052 -60065428 - AluSx SINE Alu -30 282 1 2454 75 3 0 chr17 25373921 25374227 -60064253 + AluY SINE Alu 1 307 -4 2190 98 0 14 chr17 25375202 25375488 -60062992 + AluSg SINE Alu 17 298 -12 1763 158 23 26 chr17 25375497 25375800 -60062680 + AluSq SINE Alu 6 307 -6 2271 95 3 3 chr17 25376634 25376929 -60061551 + AluSx SINE Alu 1 295 -17 2233 95 20 3 chr17 25376945 25377239 -60061241 + AluSq SINE Alu 1 299 -14 856 152 0 67 chr17 25377603 25377750 -60060730 + FRAM SINE Alu 1 23 -153 2592 54 0 22 chr17 25377750 25378066 -60060414 + AluY SINE Alu 1 309 -2 856 152 0 67 chr17 25378066 25378083 -60060397 + FRAM SINE Alu 23 40 0 245 267 22 7 chr17 25378778 25378913 -60059567 + L1M4 LINE L1 5248 5384 -762 2095 115 3 26 chr17 25380140 25380444 -60058036 - AluSx SINE Alu -15 297 1 2381 92 3 3 chr17 25380455 25380758 -60057722 - AluSc SINE Alu -6 303 1 219 268 42 101 chr17 25380880 25381048 -60057432 - MIR SINE MIR -3 259 102 2074 119 3 16 chr17 25381183 25381495 -60056985 + AluSq SINE Alu 1 308 -5 1057 125 0 13 chr17 25381495 25381647 -60056833 + AluSg/x SINE Alu 132 281 -29 1346 196 44 40 chr17 25381813 25382109 -60056371 + AluJo SINE Alu 1 297 -5 1172 187 4 22 chr17 25382109 25382334 -60056146 + AluJo SINE Alu 86 306 -6 192 314 16 66 chr17 25382481 25382602 -60055878 - L2 LINE L2 -164 3108 2994 328 358 13 13 chr17 25382755 25382906 -60055574 - L2 LINE L2 -568 2746 2596 209 324 29 0 chr17 25383047 25383115 -60055365 - MIR SINE MIR -71 191 122 233 295 152 0 chr17 25383223 25383328 -60055152 + MIR SINE MIR 23 143 -65 420 154 0 0 chr17 25383810 25383875 -60054605 + AluJ/FLAM SINE Alu 2 66 -246 606 129 88 95 chr17 25383876 25384023 -60054457 + AluJo/FRAM SINE Alu 165 310 -2 1850 88 8 0 chr17 25384027 25384293 -60054187 + AluSx SINE Alu 45 312 0 590 207 0 0 chr17 25384460 25384571 -60053909 - L1ME LINE L1 -417 5747 5637 2220 97 0 29 chr17 25384574 25384883 -60053597 - AluY SINE Alu -11 300 1 2281 106 3 0 chr17 25384893 25385194 -60053286 - AluY SINE Alu -9 302 1 964 202 29 4 chr17 25385194 25385437 -60053043 - L1ME LINE L1 -874 5272 5024 819 153 0 0 chr17 25385438 25385556 -60052924 + FLAM_C SINE Alu 1 118 -25 239 53 0 26 chr17 25385559 25385597 -60052883 + (TAAAA)n Simple_repeat Simple_repeat 2 38 0 21 0 0 0 chr17 25385597 25385618 -60052862 + AT_rich Low_complexity Low_complexity 1 21 0 347 164 15 0 chr17 25385638 25385705 -60052775 - L1ME LINE L1 -1236 4910 4843 1356 109 16 0 chr17 25385721 25385914 -60052566 - AluSg/x SINE Alu -3 307 112 2366 97 3 0 chr17 25386082 25386391 -60052089 - AluSx SINE Alu -2 310 1 2144 104 0 46 chr17 25386402 25386729 -60051751 - AluSx SINE Alu 0 312 1 26 0 0 0 chr17 25386730 25386756 -60051724 + AT_rich Low_complexity Low_complexity 1 26 0 2112 105 35 0 chr17 25387015 25387300 -60051180 - AluSx SINE Alu -7 305 11 1221 76 0 0 chr17 25388088 25388233 -60050247 - AluSg1 SINE Alu -164 145 1 2111 108 0 17 chr17 25388264 25388416 -60050064 - AluSc SINE Alu -26 283 137 2260 115 3 0 chr17 25388416 25388728 -60049752 - AluSp SINE Alu 0 313 1 2111 108 0 17 chr17 25388728 25388863 -60049617 - AluSc SINE Alu -172 137 1 2063 142 3 0 chr17 25388894 25389182 -60049298 + AluJb SINE Alu 1 289 -23 2116 122 7 7 chr17 25389191 25389485 -60048995 + AluSq SINE Alu 1 294 -19 2048 122 31 3 chr17 25389509 25389796 -60048684 + AluSq SINE Alu 1 295 -18 575 182 0 18 chr17 25389796 25389906 -60048574 - AluJo/FLAM SINE Alu -194 118 11 233 283 106 18 chr17 25390159 25390272 -60048208 + MIR SINE MIR 23 145 -117 2189 124 3 0 chr17 25390276 25390575 -60047905 + AluSx SINE Alu 1 300 -12 2155 88 4 4 chr17 25390575 25390848 -60047632 + AluSg SINE Alu 1 273 -37 1206 74 0 0 chr17 25390953 25391102 -60047378 - AluSp/q SINE Alu 0 313 165 1713 166 7 23 chr17 25391136 25391443 -60047037 + AluJb SINE Alu 1 302 -10 1434 213 24 73 chr17 25391625 25391760 -60046720 - L1ME1 LINE L1 -38 6128 5988 2330 87 3 7 chr17 25391760 25392059 -60046421 - AluSg SINE Alu -12 298 1 1434 213 24 73 chr17 25392059 25392072 -60046408 - L1ME1 LINE L1 -178 5988 5976 1409 106 173 16 chr17 25392072 25392327 -60046153 - AluSg SINE Alu -5 295 1 1434 213 24 73 chr17 25392327 25392600 -60045880 - L1ME1 LINE L1 -190 5976 5727 1882 135 0 17 chr17 25392854 25393151 -60045329 + AluSq SINE Alu 1 292 -21 1053 170 5 10 chr17 25393155 25393349 -60045131 + AluSg/x SINE Alu 120 312 0 328 210 4 0 chr17 25393349 25393419 -60045061 - L1MC4 LINE L1 -1339 6983 1995 973 168 12 0 chr17 25393421 25393588 -60044892 + AluSg/x SINE Alu 130 298 -14 424 318 51 17 chr17 25393697 25393873 -60044607 + L2 LINE L2 1807 1988 -1326 1041 171 4 92 chr17 25393874 25394113 -60044367 - AluJb SINE Alu -9 303 86 954 286 184 33 chr17 25394113 25394392 -60044088 + L2 LINE L2 1981 2216 -1098 2475 63 0 0 chr17 25394392 25394693 -60043787 - AluY SINE Alu -10 301 1 1641 180 3 3 chr17 25394698 25394993 -60043487 - AluJo SINE Alu -9 303 9 954 286 184 33 chr17 25394993 25395287 -60043193 + L2 LINE L2 2219 2648 -666 1358 84 52 5 chr17 25395299 25395490 -60042990 - AluSp SINE Alu -21 292 93 397 147 0 29 chr17 25395593 25395661 -60042819 - AluS SINE Alu -234 66 1 242 241 56 0 chr17 25395710 25395764 -60042716 + L2 LINE L2 3207 3263 -9 1623 159 0 49 chr17 25395988 25396296 -60042184 - AluJb SINE Alu -14 298 6 1993 121 13 13 chr17 25396308 25396614 -60041866 - AluSg SINE Alu -4 306 1 302 44 0 44 chr17 25396700 25396745 -60041735 + AluSq SINE Alu 15 57 -243 2079 206 68 25 chr17 25396746 25397216 -60041264 - LTR2B LTR ERV1 0 490 1 1639 127 8 0 chr17 25397217 25397461 -60041019 + AluSq SINE Alu 56 301 -12 1794 119 6 61 chr17 25397475 25397786 -60040694 + AluSg SINE Alu 1 294 -16 2259 73 13 10 chr17 25397788 25398109 -60040371 + AluY SINE Alu 1 311 0 1228 112 0 0 chr17 25398114 25398283 -60040197 + AluSx SINE Alu 1 169 -143 240 279 68 54 chr17 25398612 25398759 -60039721 + L2 LINE L2 2924 3072 -200 821 154 0 22 chr17 25399058 25399194 -60039286 + FLAM_C SINE Alu 1 133 0 1911 107 45 3 chr17 25399210 25399500 -60038980 + AluSg SINE Alu 1 302 -8 2175 110 13 0 chr17 25399506 25399805 -60038675 + AluSx SINE Alu 3 305 -7 394 354 96 37 chr17 25399955 25400778 -60037702 + L2 LINE L2 2188 3059 -213 703 101 10 0 chr17 25400891 25400990 -60037490 + HY3 scRNA scRNA 1 100 -1 219 69 0 0 chr17 25400990 25401019 -60037461 + (A)n Simple_repeat Simple_repeat 1 29 0 1105 159 0 0 chr17 25401024 25401194 -60037286 - AluSg/x SINE Alu -12 298 129 360 0 0 0 chr17 25401194 25401234 -60037246 + (TG)n Simple_repeat Simple_repeat 1 40 0 255 91 0 0 chr17 25401247 25401280 -60037200 - Alu SINE Alu -34 266 234 1335 174 3 69 chr17 25401380 25401538 -60036942 - AluJo SINE Alu -27 285 155 2208 106 3 0 chr17 25401538 25401840 -60036640 - AluSp SINE Alu -10 303 1 1335 174 3 69 chr17 25401840 25401986 -60036494 - AluJo SINE Alu -157 155 1 288 274 26 17 chr17 25402003 25402120 -60036360 + (TG)n Simple_repeat Simple_repeat 1 118 0 301 301 18 9 chr17 25402186 25402299 -60036181 + MIR3 SINE MIR 90 203 -5 1976 128 3 3 chr17 25403129 25403426 -60035054 - AluSx SINE Alu -15 297 1 1700 159 0 72 chr17 25403444 25403777 -60034703 - AluJb SINE Alu -1 311 3 182 286 61 0 chr17 25403832 25403881 -60034599 - MIR SINE MIR -138 124 73 342 309 99 9 chr17 25403905 25404121 -60034359 - MIR SINE MIR -6 256 23 301 260 31 31 chr17 25404279 25404375 -60034105 - MIR SINE MIR -88 174 79 2174 103 7 3 chr17 25404494 25404804 -60033676 + AluSx SINE Alu 1 311 -1 237 298 7 106 chr17 25404893 25404957 -60033523 - L2 LINE L2 -208 3064 3020 1834 143 27 0 chr17 25404957 25405251 -60033229 + AluJb SINE Alu 6 307 -5 237 298 7 106 chr17 25405251 25405327 -60033153 - L2 LINE L2 -252 3020 2938 200 81 81 0 chr17 25405838 25405875 -60032605 + A-rich Low_complexity Low_complexity 3 42 0 861 142 0 15 chr17 25406919 25407053 -60031427 + FLAM_C SINE Alu 2 133 0 701 200 24 0 chr17 25407732 25407857 -60030623 + FLAM_A SINE Alu 1 128 -5 2280 99 0 3 chr17 25407861 25408173 -60030307 + AluSx SINE Alu 1 311 -1 1572 153 23 39 chr17 25408184 25408331 -60030149 + AluJb SINE Alu 9 157 -155 1948 109 0 0 chr17 25408331 25408598 -60029882 + AluSx SINE Alu 34 300 -12 1572 153 23 39 chr17 25408598 25408758 -60029722 + AluJb SINE Alu 157 311 -1 2408 84 0 0 chr17 25410397 25410708 -60027772 + AluY SINE Alu 1 311 0 265 226 84 71 chr17 25411316 25411471 -60027009 + MIR SINE MIR 105 261 -1 2610 39 0 0 chr17 25413166 25413471 -60025009 + AluY SINE Alu 1 305 -6 837 188 7 7 chr17 25413512 25413666 -60024814 - FRAM SINE Alu -24 152 1 253 233 83 75 chr17 25413672 25413805 -60024675 - L2 LINE L2 -16 3297 3164 471 47 0 93 chr17 25413806 25413892 -60024588 - MER2 DNA MER2_type -137 208 131 1540 160 10 35 chr17 25414023 25414197 -60024283 - AluJb SINE Alu -8 304 140 2167 103 3 3 chr17 25414197 25414499 -60023981 - AluSp SINE Alu -9 304 3 1540 160 10 35 chr17 25414499 25414636 -60023844 - AluJb SINE Alu -172 140 1 277 250 15 0 chr17 25414636 25414704 -60023776 + MER2 DNA MER2_type 272 340 -5 1255 174 87 47 chr17 25414742 25415041 -60023439 - AluJb SINE Alu -1 311 1 2136 68 39 0 chr17 25415047 25415327 -60023153 - AluY SINE Alu -20 291 1 1374 193 0 85 chr17 25415354 25415510 -60022970 - AluJb SINE Alu -23 289 121 2132 108 16 0 chr17 25415510 25415817 -60022663 - AluSq SINE Alu -1 312 1 1374 193 0 85 chr17 25415817 25415872 -60022608 - AluJb SINE Alu -191 121 63 195 42 0 0 chr17 25415872 25415896 -60022584 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 1947 88 0 4 chr17 25415901 25416162 -60022318 - AluSq SINE Alu -53 260 1 1374 193 0 85 chr17 25416162 25416259 -60022221 - AluJb SINE Alu -253 59 1 1995 119 0 0 chr17 25416270 25416573 -60021907 - AluSg SINE Alu 0 304 2 2297 83 7 0 chr17 25417733 25418033 -60020447 - AluSp SINE Alu -11 302 1 2458 66 0 0 chr17 25418037 25418342 -60020138 - AluSq SINE Alu -6 307 3 2521 43 3 0 chr17 25418974 25419279 -60019201 + AluY SINE Alu 1 306 -5 1805 147 6 31 chr17 25419279 25419415 -60019065 + AluJb SINE Alu 2 140 -172 2010 128 3 7 chr17 25419415 25419713 -60018767 + AluSx SINE Alu 1 297 -15 2344 77 3 0 chr17 25419716 25420026 -60018454 + AluY SINE Alu 1 311 0 1805 147 6 31 chr17 25420026 25420204 -60018276 + AluJb SINE Alu 142 312 0 2109 127 0 0 chr17 25420210 25420517 -60017963 + AluY SINE Alu 1 307 -4 2371 70 0 0 chr17 25420518 25420816 -60017664 + AluY SINE Alu 1 298 -13 838 184 17 40 chr17 25420816 25420990 -60017490 + AluSg/x SINE Alu 134 303 -9 1253 167 87 47 chr17 25420996 25421295 -60017185 + AluJb SINE Alu 1 311 -1 308 268 0 0 chr17 25421331 25421402 -60017078 - MER2 DNA MER2_type -3 342 272 847 176 7 0 chr17 25421403 25421539 -60016941 + AluJo SINE Alu 2 138 -174 2154 102 16 0 chr17 25421539 25421843 -60016637 + AluSx SINE Alu 2 310 -2 1971 129 0 22 chr17 25421909 25422226 -60016254 + AluSg SINE Alu 1 310 0 2375 77 0 0 chr17 25422229 25422540 -60015940 + AluY SINE Alu 1 311 0 346 225 56 0 chr17 25422591 25422662 -60015818 + AluJ/FLAM SINE Alu 3 77 -225 254 200 0 55 chr17 25422662 25422717 -60015763 + L2 LINE L2 3221 3272 0 230 323 91 0 chr17 25422740 25422839 -60015641 - MLT1L LTR MaLR -221 394 287 388 292 83 7 chr17 25422844 25422988 -60015492 - MLT1K LTR MaLR -356 232 78 2023 101 10 0 chr17 25423077 25423365 -60015115 + AluSg SINE Alu 3 293 -17 2515 64 0 0 chr17 25423514 25423825 -60014655 - AluY SINE Alu 0 311 1 2023 120 20 3 chr17 25424612 25424913 -60013567 + AluSx SINE Alu 1 306 -6 946 161 0 42 chr17 25424913 25425081 -60013399 + AluJb SINE Alu 134 294 -18 253 284 20 49 chr17 25425083 25425185 -60013295 + L2 LINE L2 2380 2478 -836 227 274 18 26 chr17 25425189 25425302 -60013178 + L1ME3A LINE L1 6043 6154 -16 354 150 0 0 chr17 25425352 25425412 -60013068 - Alu SINE Alu 0 302 243 2179 86 31 66 chr17 25425445 25425795 -60012685 - LTR12 LTR ERV1 0 714 377 392 252 35 0 chr17 25425795 25425910 -60012570 - LTR30 LTR ERV1 -79 643 525 2768 209 89 10 chr17 25425913 25426138 -60012342 - L1ME3A LINE L1 -15 6155 5949 2162 109 0 7 chr17 25426138 25426440 -60012040 - AluSx SINE Alu -9 303 4 1317 182 66 42 chr17 25426444 25426730 -60011750 - AluJb SINE Alu -19 293 1 2768 209 89 10 chr17 25426730 25427208 -60011272 - L1ME3A LINE L1 -223 5947 5391 1043 276 40 21 chr17 25427210 25427760 -60010720 - MLT1G1 LTR MaLR 0 555 1 259 226 62 110 chr17 25427785 25427931 -60010549 - L1ME3A LINE L1 -813 5333 5195 994 164 24 0 chr17 25427931 25428096 -60010384 - AluJo/FRAM SINE Alu -10 302 134 2132 99 3 3 chr17 25428096 25428389 -60010091 - AluSq SINE Alu -20 293 1 652 214 73 66 chr17 25428400 25428606 -60009874 - L1ME3A LINE L1 -990 5156 4946 1846 123 45 14 chr17 25428606 25428763 -60009717 - AluSg SINE Alu -9 301 129 2286 89 0 3 chr17 25428763 25429066 -60009414 - AluY SINE Alu -9 302 1 1846 123 45 14 chr17 25429066 25429200 -60009280 - AluSg SINE Alu -181 129 1 652 214 73 66 chr17 25429200 25429282 -60009198 - L1ME3A LINE L1 -1200 4946 4866 839 259 161 14 chr17 25429289 25429816 -60008664 + L2 LINE L2 2696 3311 -2 362 376 0 0 chr17 25429802 25429927 -60008553 - MIR SINE MIR -120 142 18 * 900 152 0 0 chr17 25430013 25430145 -60008335 - FLAM_A SINE Alu -1 132 1 198 296 70 56 chr17 25432639 25432781 -60005699 - MIR SINE MIR -29 233 90 235 291 154 9 chr17 25436430 25436540 -60001940 + L2 LINE L2 3188 3313 0 272 188 14 0 chr17 25438041 25438110 -60000370 + GA-rich Low_complexity Low_complexity 1 70 0 186 205 0 0 chr17 25439380 25439419 -59999061 + L2 LINE L2 3017 3055 -217 184 304 53 53 chr17 25440196 25440367 -59998113 - L2 LINE L2 -51 3262 3092 1974 128 3 7 chr17 25440385 25440682 -59997798 - AluSq SINE Alu -17 296 1 2250 109 0 0 chr17 25440685 25440988 -59997492 - AluSg SINE Alu -7 303 1 2502 50 0 0 chr17 25441437 25441735 -59996745 - AluY SINE Alu -12 299 2 1851 135 0 58 chr17 25441906 25442231 -59996249 - AluJb SINE Alu -6 306 1 208 226 161 0 chr17 25442496 25442558 -59995922 - L2 LINE L2 -650 2664 2593 772 183 122 61 chr17 25442584 25442781 -59995699 + MER3 DNA MER1_type 1 209 0 2092 75 67 0 chr17 25443405 25443689 -59994791 - AluY SINE Alu -10 301 1 2144 138 0 0 chr17 25443701 25444001 -59994479 - AluSx SINE Alu -14 298 1 324 264 57 14 chr17 25446353 25446493 -59991987 + MIR SINE MIR 29 174 -88 185 328 66 0 chr17 25446539 25446600 -59991880 + MER5A DNA MER1_type 66 130 -59 * 192 246 145 43 chr17 25446551 25446620 -59991860 - MER5A DNA MER1_type -67 122 47 257 370 0 0 chr17 25446850 25446923 -59991557 + MIR SINE MIR 30 102 -106 689 127 8 17 chr17 25447421 25447539 -59990941 + FLAM_A SINE Alu 26 142 0 231 359 13 13 chr17 25447774 25447852 -59990628 - L2 LINE L2 -6 3307 3230 1331 220 115 36 chr17 25448011 25448186 -59990294 + L2 LINE L2 2757 2917 -396 2000 120 3 45 chr17 25448186 25448376 -59990104 - AluSx SINE Alu -16 296 122 2479 78 7 0 chr17 25448376 25448684 -59989796 - AluSg SINE Alu 0 310 1 2000 120 3 45 chr17 25448684 25448802 -59989678 - AluSx SINE Alu -190 122 1 1331 220 115 36 chr17 25448802 25449143 -59989337 + L2 LINE L2 2917 3309 -4 734 214 24 36 chr17 25450225 25450393 -59988087 + MIR SINE MIR 45 210 -52 371 305 114 35 chr17 25450416 25450925 -59987555 + L2 LINE L2 2556 3111 -161 653 55 9 36 chr17 25452121 25452231 -59986249 + (TTCC)n Simple_repeat Simple_repeat 1 107 0 2171 134 3 0 chr17 25452231 25452537 -59985943 - AluSq SINE Alu -6 307 1 230 298 67 48 chr17 25452950 25453054 -59985426 - L2 LINE L2 -22 3250 3145 219 311 148 0 chr17 25453378 25453513 -59984967 - MIR3 SINE MIR -33 175 21 1724 146 34 17 chr17 25456644 25456938 -59981542 - AluJb SINE Alu -13 299 1 545 217 0 151 chr17 25457537 25457749 -59980731 - MER5A DNA MER1_type 0 189 10 2026 149 0 0 chr17 25457899 25458209 -59980271 - AluJb SINE Alu 0 310 1 442 341 16 4 chr17 25460491 25460653 -59977827 + MIR3 SINE MIR 3 165 -68 2522 54 7 0 chr17 25462709 25463005 -59975475 + AluY SINE Alu 1 298 -13 2388 75 0 7 chr17 25463531 25463823 -59974657 + AluSp SINE Alu 3 292 -21 1988 161 0 0 chr17 25464145 25464456 -59974024 + AluY SINE Alu 1 311 0 199 313 0 0 chr17 25464458 25464506 -59973974 + MIR SINE MIR 209 256 -6 638 296 94 62 chr17 25464626 25465342 -59973138 - L2 LINE L2 0 3272 2165 2332 96 0 3 chr17 25465957 25466250 -59972230 - AluSq SINE Alu -21 292 1 201 216 0 59 chr17 25466926 25466977 -59971503 + MIR SINE MIR 106 153 -109 2101 96 0 27 chr17 25469210 25469534 -59968946 + AluSx SINE Alu 6 312 0 2366 91 0 0 chr17 25470329 25470615 -59967865 - AluSc SINE Alu -23 286 1 2337 90 0 34 chr17 25470616 25470938 -59967542 - AluY SINE Alu 0 311 1 1409 178 82 32 chr17 25470940 25471221 -59967259 - AluJb SINE Alu -17 295 1 1283 187 4 26 chr17 25471918 25472148 -59966332 - AluJo SINE Alu -87 225 1 982 232 131 71 chr17 25472286 25472553 -59965927 + L1MC4a LINE L1 5566 5816 -1992 1415 157 138 8 chr17 25472553 25472814 -59965666 + AluJo SINE Alu 1 295 -17 982 232 131 71 chr17 25472814 25473097 -59965383 + L1MC4a LINE L1 5816 6149 -1659 2227 121 19 3 chr17 25473130 25473437 -59965043 + AluSx SINE Alu 1 312 0 2516 89 0 0 chr17 25474424 25474726 -59963754 + AluSx SINE Alu 1 302 -10 320 316 43 50 chr17 25474891 25475099 -59963381 + MIR3 SINE MIR 6 207 -55 321 283 93 55 chr17 25475371 25475608 -59962872 + MIR3 SINE MIR 7 252 -10 1232 243 114 44 chr17 25477311 25477584 -59960896 + MLT1H1 LTR MaLR 1 254 -301 2205 142 0 0 chr17 25477584 25477880 -59960600 + AluSx SINE Alu 1 296 -16 1232 243 114 44 chr17 25477880 25478125 -59960355 + MLT1H1 LTR MaLR 254 555 0 1647 130 27 0 chr17 25478310 25478571 -59959909 + AluSq SINE Alu 56 322 0 2128 100 0 0 chr17 25478571 25478841 -59959639 + AluSg SINE Alu 1 270 -40 354 146 16 0 chr17 25478941 25479015 -59959465 - AluS SINE Alu -242 61 1 246 327 58 45 chr17 25479573 25479729 -59958751 + L2 LINE L2 2896 3053 -219 274 324 14 0 chr17 25479803 25479874 -59958606 + L2 LINE L2 3186 3257 -15 1935 146 36 3 chr17 25480245 25480546 -59957934 + AluJb SINE Alu 1 311 -1 2443 83 0 3 chr17 25480714 25481014 -59957466 - AluSx SINE Alu -13 299 1 2229 120 0 0 chr17 25481039 25481339 -59957141 - AluSx SINE Alu -12 300 1 1952 154 0 7 chr17 25481592 25481891 -59956589 - AluJb SINE Alu -15 297 1 2143 129 14 0 chr17 25482121 25482416 -59956064 + AluSx SINE Alu 1 299 -13 378 283 253 6 chr17 25482784 25482950 -59955530 - MIR SINE MIR -50 212 6 1785 177 10 0 chr17 25483225 25483513 -59954967 + AluJb SINE Alu 1 291 -21 225 311 66 0 chr17 25483541 25483602 -59954878 - L2 LINE L2 0 3313 3249 2188 109 33 10 chr17 25484053 25484357 -59954123 - AluSx SINE Alu 0 312 2 2134 121 0 0 chr17 25484714 25485029 -59953451 - AluSx SINE Alu 0 315 1 202 273 0 30 chr17 25485768 25485834 -59952646 + GA-rich Low_complexity Low_complexity 2 65 0 29 0 0 0 chr17 25486579 25486608 -59951872 + AT_rich Low_complexity Low_complexity 1 29 0 2301 108 3 0 chr17 25487689 25487985 -59950495 - AluSg SINE Alu -13 297 1 2090 100 28 14 chr17 25491075 25491364 -59947116 - AluSq SINE Alu -20 293 1 1520 158 4 23 chr17 25491732 25491991 -59946489 + AluJo SINE Alu 43 296 -16 2307 104 0 0 chr17 25491993 25492317 -59946163 + AluSg SINE Alu 1 324 0 2173 166 51 28 chr17 25492324 25492810 -59945670 + L1MB8 LINE L1 5190 5691 -493 2147 125 3 13 chr17 25492810 25493140 -59945340 + AluSq SINE Alu 6 313 0 2173 166 51 28 chr17 25493140 25493198 -59945282 + L1MB8 LINE L1 5691 5746 -438 565 151 40 16 chr17 25493298 25493424 -59945056 + L1MB8 LINE L1 5748 5876 -302 848 145 0 0 chr17 25494102 25494226 -59944254 + AluSg/x SINE Alu 183 306 -6 186 43 0 0 chr17 25494265 25494288 -59944192 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1175 185 162 8 chr17 25494548 25494807 -59943673 + AluJo SINE Alu 1 299 -3 2199 91 14 7 chr17 25495409 25495706 -59942774 + AluSg SINE Alu 1 299 -11 789 154 0 37 chr17 25496258 25496394 -59942086 - FLAM_C SINE Alu -1 132 2 427 308 123 11 chr17 25501054 25501239 -59937241 - MIR3 SINE MIR -4 204 1 1506 183 14 11 chr17 25502787 25503066 -59935414 + AluJb SINE Alu 27 306 -6 234 0 0 0 chr17 25503178 25503204 -59935276 + (T)n Simple_repeat Simple_repeat 1 26 0 189 0 0 0 chr17 25504486 25504507 -59933973 + (CGGGGG)n Simple_repeat Simple_repeat 3 23 0 370 273 101 0 chr17 25506107 25506246 -59932234 - MIR SINE MIR -87 175 23 1871 143 33 0 chr17 25506840 25507141 -59931339 + AluSx SINE Alu 1 311 -1 220 272 148 0 chr17 25507156 25507237 -59931243 - L3b LINE CR1 -221 1362 1270 311 318 0 0 chr17 25508419 25508507 -59929973 + L2 LINE L2 3185 3272 0 197 255 39 0 chr17 25509570 25509621 -59928859 + MIR SINE MIR 64 116 -92 397 325 104 31 chr17 25510329 25510801 -59927679 + L2 LINE L2 2709 3218 -54 2253 98 0 7 chr17 25510831 25511136 -59927344 + AluSx SINE Alu 1 303 -9 2428 70 0 0 chr17 25511177 25511479 -59927001 + AluY SINE Alu 1 302 -9 294 352 137 20 chr17 25511804 25512162 -59926318 + L2 LINE L2 2870 3269 -3 266 390 71 9 chr17 25512942 25513152 -59925328 + L2 LINE L2 3088 3310 -3 331 281 84 43 chr17 25513659 25513894 -59924586 + MIR SINE MIR 3 256 -6 2231 78 7 0 chr17 25514100 25514393 -59924087 + AluSp SINE Alu 1 295 -18 2277 90 0 10 chr17 25514394 25514705 -59923775 + AluSq SINE Alu 1 308 -5 1472 180 11 11 chr17 25514725 25514992 -59923488 + AluJo SINE Alu 45 311 -1 2005 103 0 14 chr17 25515183 25515464 -59923016 + AluSx SINE Alu 3 279 -33 298 0 48 0 chr17 25515471 25515513 -59922967 + (TAAAA)n Simple_repeat Simple_repeat 2 45 0 2000 103 17 31 chr17 25515523 25515815 -59922665 + AluSg SINE Alu 1 288 -22 644 304 60 0 chr17 25516265 25516482 -59921998 + MIR SINE MIR 2 231 -31 272 259 156 22 chr17 25516613 25516748 -59921732 - MIR SINE MIR -98 164 12 243 333 83 30 chr17 25516940 25517072 -59921408 - MIR SINE MIR -5 257 119 519 309 119 10 chr17 25518312 25518513 -59919967 - MIR SINE MIR -38 224 2 426 324 83 0 chr17 25518666 25518811 -59919669 + L2 LINE L2 3116 3272 0 250 292 35 35 chr17 25519443 25519556 -59918924 - MIR SINE MIR -63 145 33 243 202 11 124 chr17 25519585 25519674 -59918806 + MIR3 SINE MIR 104 182 -26 417 351 142 46 chr17 25519684 25520228 -59918252 + L2 LINE L2 2265 2860 -454 294 290 137 46 chr17 25520415 25520546 -59917934 + MIR3 SINE MIR 2 144 -64 442 275 162 0 chr17 25520561 25520634 -59917846 + MER5A DNA MER1_type 4 64 -125 2413 82 0 0 chr17 25520634 25520938 -59917542 + AluSp SINE Alu 1 304 -9 442 275 162 0 chr17 25520938 25521006 -59917474 + MER5A DNA MER1_type 64 168 -21 381 278 120 0 chr17 25521921 25522029 -59916451 + L3 LINE CR1 1455 1575 -2 318 267 76 5 chr17 25522426 25522557 -59915923 - MIR SINE MIR -44 218 75 350 326 26 47 chr17 25523824 25524018 -59914462 - MIR SINE MIR -56 206 19 634 270 98 0 chr17 25524205 25524409 -59914071 + MIR SINE MIR 20 243 -19 380 358 40 6 chr17 25524682 25524858 -59913622 - MIR3 SINE MIR -26 182 1 519 254 179 46 chr17 25526158 25526398 -59912082 + L2 LINE L2 2997 3268 -4 222 295 0 0 chr17 25526419 25526480 -59912000 + MIR SINE MIR 75 135 -73 355 318 182 41 chr17 25527694 25528445 -59910035 - L2 LINE L2 -100 3172 2302 236 405 16 8 chr17 25528532 25528658 -59909822 + L2 LINE L2 3132 3258 -14 195 42 0 0 chr17 25528659 25528683 -59909797 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 405 0 0 0 chr17 25529205 25529250 -59909230 + (TG)n Simple_repeat Simple_repeat 1 45 0 1007 76 8 0 chr17 25529339 25529470 -59909010 - AluY SINE Alu -179 132 1 342 289 26 77 chr17 25529471 25529518 -59908962 - MIR SINE MIR -55 207 159 2222 111 3 9 chr17 25529518 25529696 -59908784 - AluSq SINE Alu 0 313 136 2258 75 7 3 chr17 25529696 25529991 -59908489 - AluY SINE Alu -15 296 1 2222 111 3 9 chr17 25529991 25530127 -59908353 - AluSq SINE Alu -177 136 1 342 289 26 77 chr17 25530127 25530224 -59908256 - MIR SINE MIR -103 159 73 2157 115 0 0 chr17 25530224 25530519 -59907961 - AluSx SINE Alu -17 295 1 342 289 26 77 chr17 25530519 25530567 -59907913 - MIR SINE MIR -189 73 24 285 98 0 0 chr17 25530708 25530749 -59907731 + (TGG)n Simple_repeat Simple_repeat 3 43 0 448 282 53 0 chr17 25531549 25531719 -59906761 - MER117 DNA MER1_type -17 180 2 339 238 129 10 chr17 25531734 25531835 -59906645 - MIR SINE MIR -62 146 34 1604 145 25 63 chr17 25531972 25532289 -59906191 - AluJb SINE Alu -7 305 1 511 238 28 28 chr17 25532393 25532536 -59905944 + MIR SINE MIR 3 145 -117 384 268 30 30 chr17 25532680 25532848 -59905632 - MER117 DNA MER1_type -29 168 1 380 87 43 14 chr17 25534382 25534451 -59904029 - MADE1 DNA Mariner -1 79 9 288 256 47 39 chr17 25534461 25534590 -59903890 - L1ME LINE L1 -460 5661 5532 360 0 0 0 chr17 25535337 25535377 -59903103 + (TG)n Simple_repeat Simple_repeat 2 41 0 21 57 0 0 chr17 25535907 25535942 -59902538 + GC_rich Low_complexity Low_complexity 1 35 0 1920 146 0 3 chr17 25536205 25536506 -59901974 - AluSc SINE Alu -9 300 1 1122 44 0 7 chr17 25536506 25536641 -59901839 - AluY SINE Alu -177 134 1 1967 123 3 3 chr17 25536804 25537105 -59901375 - AluY SINE Alu -10 301 1 2007 115 0 3 chr17 25537281 25537567 -59900913 - AluSc SINE Alu -24 285 1 1146 37 0 7 chr17 25537567 25537702 -59900778 - AluY SINE Alu -177 134 1 2328 73 3 3 chr17 25537865 25538166 -59900314 - AluY SINE Alu -10 301 1 342 220 0 0 chr17 25538242 25538342 -59900138 + (TG)n Simple_repeat Simple_repeat 1 100 0 180 362 19 38 chr17 25538466 25538571 -59899909 - MIR3 SINE MIR -45 163 61 817 83 33 16 chr17 25538996 25539117 -59899363 - Alu SINE Alu -10 301 179 295 172 16 16 chr17 25539256 25539320 -59899160 - MER117 DNA MER1_type -133 64 1 380 323 99 37 chr17 25540737 25540951 -59897529 - MIR SINE MIR -37 225 3 209 295 77 0 chr17 25540997 25541075 -59897405 - MIR SINE MIR -72 136 53 412 231 58 10 chr17 25541233 25541337 -59897143 + MIR SINE MIR 36 144 -118 345 317 24 0 chr17 25542285 25542410 -59896070 - MIR SINE MIR -61 147 38 310 245 57 28 chr17 25542504 25542610 -59895870 + MIR SINE MIR 38 146 -62 298 264 38 28 chr17 25543342 25543448 -59895032 - MIR SINE MIR -61 147 41 553 298 76 18 chr17 25543490 25543715 -59894765 - MIR SINE MIR -12 250 13 212 319 50 21 chr17 25543908 25544049 -59894431 + L2 LINE L2 2911 3055 -217 283 227 173 0 chr17 25544567 25544677 -59893803 - MIR3 SINE MIR -22 186 58 231 297 68 0 chr17 25544747 25544821 -59893659 - L3 LINE CR1 -113 1464 1386 242 376 194 0 chr17 25544864 25545034 -59893446 + MIR3 SINE MIR 3 205 -3 496 277 138 20 chr17 25545075 25545270 -59893210 - MIR SINE MIR -14 248 31 232 130 65 0 chr17 25545270 25545316 -59893164 + MER3 DNA MER1_type 1 49 -160 23 33 0 0 chr17 25545302 25545332 -59893148 + AT_rich Low_complexity Low_complexity 1 30 0 * 1532 93 7 123 chr17 25545371 25545582 -59892898 + LTR8A LTR ERV1 1 168 -559 2037 109 0 14 chr17 25545582 25545867 -59892613 + AluSq SINE Alu 1 281 -32 1532 93 7 123 chr17 25545867 25545956 -59892524 + LTR8A LTR ERV1 168 266 -461 838 125 0 0 chr17 25546058 25546178 -59892302 + AluSg/x SINE Alu 184 303 -9 221 235 44 29 chr17 25546198 25546266 -59892214 - MIR SINE MIR -76 132 64 216 243 0 0 chr17 25548035 25548109 -59890371 + (CA)n Simple_repeat Simple_repeat 2 75 0 323 330 99 19 chr17 25548143 25548355 -59890125 + MIR SINE MIR 27 255 -7 337 148 0 0 chr17 25548891 25548945 -59889535 - MER3 DNA MER1_type -1 208 155 2312 71 0 3 chr17 25548945 25549242 -59889238 + AluSx SINE Alu 1 296 -16 2034 118 11 0 chr17 25549246 25549533 -59888947 + AluSx SINE Alu 1 290 -22 23 0 0 0 chr17 25549533 25549556 -59888924 + AT_rich Low_complexity Low_complexity 1 23 0 273 282 136 0 chr17 25551268 25551371 -59887109 - MIR3 SINE MIR -78 130 14 285 98 0 0 chr17 25551559 25551600 -59886880 + (GGGA)n Simple_repeat Simple_repeat 1 41 0 187 79 53 0 chr17 25552572 25552610 -59885870 + (TGGA)n Simple_repeat Simple_repeat 1 40 0 475 286 23 0 chr17 25553514 25553647 -59884833 + MIR SINE MIR 127 262 0 416 287 112 7 chr17 25553783 25553926 -59884554 + MIR SINE MIR 64 221 -41 258 211 113 14 chr17 25554373 25554444 -59884036 - L2 LINE L2 0 3313 3236 285 339 46 8 chr17 25555003 25555133 -59883347 - L2 LINE L2 -237 3035 2901 200 246 35 0 chr17 25556457 25556514 -59881966 - MIR SINE MIR -82 126 68 360 0 0 0 chr17 25558563 25558603 -59879877 + (TG)n Simple_repeat Simple_repeat 2 41 0 29 70 0 0 chr17 25559133 25559190 -59879290 + GC_rich Low_complexity Low_complexity 1 57 0 218 167 0 0 chr17 25559464 25559500 -59878980 + (CCG)n Simple_repeat Simple_repeat 2 37 0 182 36 0 36 chr17 25560324 25560352 -59878128 + (TTTTA)n Simple_repeat Simple_repeat 2 28 0 1576 150 40 25 chr17 25560354 25560628 -59877852 - AluJo SINE Alu -30 282 5 513 278 117 0 chr17 25562165 25562327 -59876153 + L2 LINE L2 3090 3270 -2 22 0 0 0 chr17 25562479 25562501 -59875979 + AT_rich Low_complexity Low_complexity 1 22 0 1734 181 0 0 chr17 25562501 25562788 -59875692 - AluJb SINE Alu -25 287 1 203 324 203 0 chr17 25565341 25565489 -59872991 - L2 LINE L2 -267 3005 2828 196 306 0 56 chr17 25565612 25565684 -59872796 - L2 LINE L2 0 3313 3246 2217 114 7 0 chr17 25566540 25566846 -59871634 + AluSx SINE Alu 1 308 -4 275 258 232 22 chr17 25566868 25567047 -59871433 + MIR SINE MIR 24 241 -21 631 255 66 52 chr17 25567190 25567402 -59871078 + MIR SINE MIR 17 231 -31 968 204 122 13 chr17 25567748 25567978 -59870502 - MIR SINE MIR -1 261 7 199 286 162 9 chr17 25568936 25569041 -59869439 + L2 LINE L2 3191 3311 -2 1241 148 0 30 chr17 25569235 25569422 -59869058 - AluJb SINE Alu 0 317 136 2303 79 0 0 chr17 25569422 25569725 -59868755 - AluY SINE Alu -8 303 1 1241 148 0 30 chr17 25569725 25569773 -59868707 - AluJb SINE Alu -181 136 88 767 312 17 8 chr17 25570732 25570969 -59867511 - MIR SINE MIR -12 250 12 286 340 122 0 chr17 25571479 25571626 -59866854 + MIR SINE MIR 90 254 -8 2142 100 17 0 chr17 25571732 25572021 -59866459 - AluSg SINE Alu -16 294 1 224 326 42 0 chr17 25572598 25572693 -59865787 - MIR SINE MIR -133 129 31 404 322 47 13 chr17 25572784 25572933 -59865547 + L3b LINE CR1 1306 1459 -124 261 246 87 24 chr17 25573034 25573160 -59865320 - HAL1 LINE L1 -1 2506 2373 568 274 0 20 chr17 25573181 25573334 -59865146 - L1MC4a LINE L1 -1843 5965 5816 582 237 59 89 chr17 25574464 25574700 -59863780 + MER102b DNA MER1_type 111 339 -2 204 200 18 36 chr17 25574723 25574778 -59863702 - MIR SINE MIR -125 137 84 258 176 0 0 chr17 25574790 25574841 -59863639 + T-rich Low_complexity Low_complexity 1 51 0 256 114 0 45 chr17 25575983 25576027 -59862453 - MIR SINE MIR -61 147 106 25 0 0 0 chr17 25576535 25576560 -59861920 + AT_rich Low_complexity Low_complexity 1 25 0 235 238 35 91 chr17 25576721 25576864 -59861616 - L1ME4a LINE L1 -46 6075 5941 405 87 43 14 chr17 25577191 25577260 -59861220 - MADE1 DNA Mariner -1 79 9 352 237 79 40 chr17 25577270 25577422 -59861058 - L1MC4a LINE L1 -460 5661 5504 2363 69 0 10 chr17 25578659 25578962 -59859518 + AluY SINE Alu 1 300 -11 504 220 16 25 chr17 25579199 25579382 -59859098 + MIR SINE MIR 14 241 -21 678 233 8 0 chr17 25579747 25579876 -59858604 - FLAM_A SINE Alu -2 131 2 712 94 0 72 chr17 25579883 25579942 -59858538 - L1MA7 LINE L1 0 6291 6229 1640 152 30 26 chr17 25579942 25580244 -59858236 - AluJo SINE Alu -9 303 1 712 94 0 72 chr17 25580244 25580322 -59858158 - L1MA7 LINE L1 -62 6229 6164 407 175 8 108 chr17 25580322 25580374 -59858106 + L1MA9 LINE L1 5925 5960 -352 2062 96 21 7 chr17 25580374 25580665 -59857815 + AluSq SINE Alu 1 295 -18 407 175 8 108 chr17 25580665 25580732 -59857748 + L1MA9 LINE L1 5960 6032 -280 369 0 0 0 chr17 25581677 25581718 -59856762 + (CA)n Simple_repeat Simple_repeat 2 42 0 1583 129 85 11 chr17 25582454 25582725 -59855755 - AluJb SINE Alu -21 291 1 1667 127 49 102 chr17 25582771 25583150 -59855330 - L1MB3 LINE L1 0 6183 5830 1505 113 32 0 chr17 25583150 25583371 -59855109 - AluJb SINE Alu 0 312 85 1667 127 49 102 chr17 25583371 25583441 -59855039 - L1MB3 LINE L1 -353 5830 5758 2349 60 3 0 chr17 25583460 25583758 -59854722 - AluY SINE Alu -12 299 1 375 285 59 38 chr17 25584015 25584201 -59854279 - MARNA DNA Mariner -353 233 44 785 130 0 0 chr17 25584562 25584677 -59853803 - AluSp/q SINE Alu -14 299 185 1653 89 0 13 chr17 25584677 25584902 -59853578 - AluSq SINE Alu -91 222 1 2112 137 0 6 chr17 25584910 25585224 -59853256 - AluSx SINE Alu 0 312 1 325 205 0 64 chr17 25586017 25586095 -59852385 + MIR SINE MIR 120 192 -70 749 212 53 0 chr17 25587412 25587563 -59850917 - MLT1H1 LTR MaLR -53 502 344 535 148 0 11 chr17 25587563 25587651 -59850829 - FLAM SINE Alu -19 124 38 515 244 222 60 chr17 25587701 25587776 -59850704 - MLT1H1 LTR MaLR -281 274 213 2139 105 0 3 chr17 25587776 25588072 -59850408 + AluSg SINE Alu 1 295 -15 515 244 222 60 chr17 25588072 25588230 -59850250 - MLT1H1 LTR MaLR -342 213 3 1609 163 10 38 chr17 25588254 25588567 -59849913 + AluJb SINE Alu 1 304 -8 501 279 13 19 chr17 25588614 25588772 -59849708 + MER69A DNA AcHobo 1 157 -20 26 0 0 0 chr17 25590125 25590151 -59848329 + AT_rich Low_complexity Low_complexity 1 26 0 289 318 0 0 chr17 25590540 25590625 -59847855 + MIR3 SINE MIR 118 202 -6 1222 189 25 13 chr17 25590796 25591034 -59847446 - AluJo SINE Alu -19 293 53 282 313 94 43 chr17 25591778 25592107 -59846373 + L1MEd LINE L1 49 394 -5725 614 308 111 39 chr17 25592108 25592799 -59845681 + L1MEd LINE L1 512 1252 -4867 799 189 0 0 chr17 25593110 25593308 -59845172 - FLAM_A SINE Alu 0 208 11 236 170 43 0 chr17 25594821 25594868 -59843612 + L1P3 LINE L1 5774 5822 -350 593 337 24 20 chr17 25595345 25595642 -59842838 - L2 LINE L2 -424 2890 2593 197 273 158 29 chr17 25596498 25596637 -59841843 + L3b LINE CR1 1295 1451 -132 370 280 217 23 chr17 25597235 25597410 -59841070 + MIR SINE MIR 29 237 -25 558 254 103 16 chr17 25597614 25597799 -59840681 + MIR SINE MIR 26 226 -36 2042 93 0 28 chr17 25597855 25598178 -59840302 + AluSx SINE Alu 1 315 0 1613 213 34 6 chr17 25598318 25598646 -59839834 - MER58B DNA MER1_type -1 340 4 211 366 128 24 chr17 25598652 25598816 -59839664 - L3b LINE CR1 -24 1559 1379 204 351 213 13 chr17 25598898 25599123 -59839357 - L3b LINE CR1 -202 1381 1112 203 146 24 0 chr17 25600975 25601016 -59837464 + GA-rich Low_complexity Low_complexity 3 44 0 712 185 15 22 chr17 25601264 25601399 -59837081 + AluJo SINE Alu 2 135 -177 1394 167 56 42 chr17 25601400 25601706 -59836774 + AluJo SINE Alu 2 311 -1 1719 131 69 0 chr17 25601710 25601985 -59836495 + AluSg SINE Alu 1 294 -16 385 208 69 20 chr17 25602650 25602778 -59835702 - MER20B DNA MER1_type -65 154 28 286 271 42 0 chr17 25602829 25602925 -59835555 - MIR SINE MIR -65 143 44 1512 195 0 42 chr17 25603410 25603723 -59834757 - AluJb SINE Alu -12 300 1 746 225 38 80 chr17 25604472 25604643 -59833837 + MIR SINE MIR 12 189 -73 569 101 13 0 chr17 25604643 25604722 -59833758 - MADE1 DNA Mariner 0 80 1 746 225 38 80 chr17 25604722 25604749 -59833731 + MIR SINE MIR 189 216 -46 1762 162 0 7 chr17 25604749 25605060 -59833420 + AluJb SINE Alu 1 309 0 746 225 38 80 chr17 25605060 25605121 -59833359 + MIR SINE MIR 216 262 0 2221 111 3 0 chr17 25607552 25607858 -59830622 + AluSq SINE Alu 1 307 -6 2165 110 0 0 chr17 25608819 25609118 -59829362 + AluSx SINE Alu 1 299 -13 283 272 24 64 chr17 25609157 25609282 -59829198 + MIR SINE MIR 82 201 -61 824 210 42 115 chr17 25609284 25609393 -59829087 - L2 LINE L2 0 3313 3198 3379 136 14 66 chr17 25609393 25609652 -59828828 + L1MB2 LINE L1 5572 5843 -328 1534 130 0 21 chr17 25609652 25609789 -59828691 + AluSx SINE Alu 1 132 -180 2302 87 3 0 chr17 25609789 25610087 -59828393 + AluSc SINE Alu 1 299 -10 1534 130 0 21 chr17 25610087 25610188 -59828292 + AluSx SINE Alu 132 234 -78 3379 136 14 66 chr17 25610188 25610210 -59828270 + L1MB2 LINE L1 5843 5865 -306 314 0 49 0 chr17 25610210 25610251 -59828229 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 3379 136 14 66 chr17 25610251 25610601 -59827879 + L1MB2 LINE L1 5865 6171 0 2104 97 0 42 chr17 25610606 25610914 -59827566 - AluSx SINE Alu -17 295 1 824 210 42 115 chr17 25610914 25611155 -59827325 - L2 LINE L2 -119 3194 2983 234 336 81 20 chr17 25612591 25612740 -59825740 + L3b LINE CR1 1331 1488 -95 616 190 15 29 chr17 25613872 25614009 -59824471 + MER5B DNA MER1_type 7 141 -37 285 162 16 141 chr17 25614009 25614194 -59824286 + L1MC5 LINE L1 7549 7710 -251 863 226 0 18 chr17 25614194 25614362 -59824118 + FRAM SINE Alu 1 163 -13 2038 110 0 7 chr17 25614365 25614656 -59823824 + AluSc SINE Alu 1 289 -20 246 62 0 0 chr17 25614661 25614693 -59823787 + (TTTCC)n Simple_repeat Simple_repeat 4 35 0 1395 162 143 33 chr17 25614696 25614968 -59823512 - AluJb SINE Alu 0 302 1 329 243 81 44 chr17 25614973 25615109 -59823371 + L1MC5 LINE L1 7703 7843 -118 27 22 0 22 chr17 25615109 25615138 -59823342 + AT_rich Low_complexity Low_complexity 1 30 -14 2155 91 0 14 chr17 25615138 25615435 -59823045 + AluSx SINE Alu 1 293 -19 27 22 0 22 chr17 25615435 25615450 -59823030 + AT_rich Low_complexity Low_complexity 30 44 0 483 193 0 11 chr17 25615450 25615538 -59822942 - FLAM_A SINE Alu -19 123 37 2441 91 53 14 chr17 25615576 25615937 -59822543 - THE1C LTR MaLR 0 375 1 189 0 0 0 chr17 25617429 25617450 -59821030 + (A)n Simple_repeat Simple_repeat 1 21 0 1563 112 31 31 chr17 25618510 25618676 -59819804 - AluSx SINE Alu -9 303 135 2440 43 0 10 chr17 25618676 25618977 -59819503 - AluY SINE Alu -13 298 1 1563 112 31 31 chr17 25618977 25619070 -59819410 - AluSx SINE Alu -176 136 44 272 301 157 26 chr17 25619934 25620087 -59818393 + MIR SINE MIR 90 262 0 2202 89 0 13 chr17 25620092 25620394 -59818086 - AluSq SINE Alu -15 298 1 314 219 27 0 chr17 25621028 25621101 -59817379 - MIR SINE MIR -111 151 77 298 340 94 0 chr17 25621258 25621470 -59817010 + L3b LINE CR1 1161 1392 -191 193 353 58 14 chr17 25622372 25622511 -59815969 + L2 LINE L2 2915 3059 -213 225 260 180 70 chr17 25622718 25622818 -59815662 + L2 LINE L2 3203 3313 0 207 0 0 0 chr17 25623053 25623076 -59815404 + (T)n Simple_repeat Simple_repeat 1 23 0 1967 129 3 10 chr17 25623094 25623388 -59815092 + AluSx SINE Alu 1 292 -20 279 183 37 0 chr17 25623924 25624006 -59814474 + GA-rich Low_complexity Low_complexity 2 86 0 339 342 106 12 chr17 25625986 25626147 -59812333 - MER5A DNA MER1_type 0 189 14 296 258 129 41 chr17 25626954 25627126 -59811354 - MIR SINE MIR -9 253 58 189 0 0 0 chr17 25627186 25627207 -59811273 + (A)n Simple_repeat Simple_repeat 1 21 0 2157 87 3 7 chr17 25628877 25629166 -59809314 - AluSx SINE Alu -24 288 1 553 358 25 12 chr17 25630115 25630358 -59808122 + MIR SINE MIR 13 258 -4 243 0 0 0 chr17 25634383 25634410 -59804070 + (CA)n Simple_repeat Simple_repeat 1 27 0 185 159 23 0 chr17 25635031 25635075 -59803405 + (TG)n Simple_repeat Simple_repeat 1 45 0 388 306 98 6 chr17 25638043 25638216 -59800264 + MIR SINE MIR 28 216 -46 329 250 134 9 chr17 25638788 25638900 -59799580 + MIR SINE MIR 66 191 -71 2406 43 10 3 chr17 25638901 25639204 -59799276 - AluY SINE Alu -6 305 1 1946 130 0 27 chr17 25639612 25639911 -59798569 + AluJb SINE Alu 7 297 -15 1999 72 47 11 chr17 25640017 25640296 -59798184 + AluSc SINE Alu 17 305 -4 238 368 0 28 chr17 25640298 25640442 -59798038 + GA-rich Low_complexity Low_complexity 3 142 0 1832 149 10 10 chr17 25651848 25652150 -59786330 - AluJo SINE Alu -10 302 1 1975 148 0 3 chr17 25652156 25652459 -59786021 - AluSx SINE Alu -10 302 1 218 278 40 33 chr17 25653326 25653477 -59785003 + (CAGAGA)n Simple_repeat Simple_repeat 6 157 0 226 341 12 0 chr17 25654627 25654709 -59783771 - L2 LINE L2 -14 3258 3176 1076 360 163 22 chr17 25654793 25655751 -59782729 - L2 LINE L2 -249 3023 2202 2395 69 26 0 chr17 25655751 25656054 -59782426 + AluY SINE Alu 1 311 0 1076 360 163 22 chr17 25656054 25657101 -59781379 - L2 LINE L2 -1070 2202 739 180 310 14 42 chr17 25658268 25658339 -59780141 + L3 LINE CR1 1398 1466 -111 216 0 0 0 chr17 25658456 25658480 -59780000 + (A)n Simple_repeat Simple_repeat 1 24 0 2014 123 10 7 chr17 25658487 25658787 -59779693 + AluSx SINE Alu 1 301 -11 598 258 91 5 chr17 25658795 25659014 -59779466 + MIR SINE MIR 6 248 -14 440 264 72 30 chr17 25659280 25659447 -59779033 - MIR3 SINE MIR -4 204 31 644 112 28 0 chr17 25660055 25660162 -59778318 + MIR SINE MIR 29 138 -124 620 243 28 44 chr17 25661793 25661974 -59776506 + L2 LINE L2 3127 3304 -9 458 326 9 27 chr17 25663235 25663456 -59775024 - MER102a DNA MER1_type -12 318 102 511 325 64 29 chr17 25665019 25665390 -59773090 - L3 LINE CR1 -25 1552 1123 285 274 57 19 chr17 25669876 25669982 -59768498 + MIR SINE MIR 20 129 -133 299 273 52 0 chr17 25670107 25670184 -59768296 + L2 LINE L2 3171 3251 -21 2241 110 0 13 chr17 25670519 25670829 -59767651 - AluSx SINE Alu -6 306 1 1114 152 0 22 chr17 25670833 25671011 -59767469 - AluJb SINE Alu -7 305 132 2405 71 0 0 chr17 25674732 25675027 -59763453 + AluY SINE Alu 1 295 -16 236 188 0 21 chr17 25677261 25677309 -59761171 + G-rich Low_complexity Low_complexity 6 52 0 189 286 86 0 chr17 25678015 25678085 -59760395 - MIR SINE MIR -8 254 179 392 210 228 0 chr17 25678108 25678270 -59760210 + MER46C DNA MER2_type 13 211 -127 1939 156 6 16 chr17 25680980 25681294 -59757186 + AluJb SINE Alu 1 311 -1 270 254 0 15 chr17 25681318 25681385 -59757095 - MIR SINE MIR 0 262 197 24 0 0 0 chr17 25681393 25681417 -59757063 + AT_rich Low_complexity Low_complexity 1 24 0 486 0 0 0 chr17 25681440 25681494 -59756986 + (CA)n Simple_repeat Simple_repeat 1 54 0 306 180 0 0 chr17 25682259 25682320 -59756160 + (CA)n Simple_repeat Simple_repeat 2 62 0 1884 113 68 3 chr17 25685057 25685349 -59753131 - AluSx SINE Alu -1 311 1 391 268 107 0 chr17 25685353 25685465 -59753015 + MIR3 SINE MIR 81 204 -4 2243 85 0 0 chr17 25685486 25685789 -59752691 - AluSp SINE Alu 0 303 1 2219 88 0 23 chr17 25686060 25686368 -59752112 - AluY SINE Alu -10 301 1 869 121 0 104 chr17 25686790 25686912 -59751568 + L1MA1 LINE L1 6148 6281 -21 1899 151 0 10 chr17 25686912 25687217 -59751263 + AluJb SINE Alu 1 302 -10 222 37 0 0 chr17 25687217 25687244 -59751236 + (TA)n Simple_repeat Simple_repeat 2 28 0 869 121 0 104 chr17 25687244 25687293 -59751187 + L1MA1 LINE L1 6279 6302 0 553 272 60 65 chr17 25687466 25687698 -59750782 - MIR SINE MIR -9 253 23 384 302 231 0 chr17 25687959 25688128 -59750352 - MIR SINE MIR -7 255 48 427 350 36 51 chr17 25688451 25688813 -59749667 + L1MB7 LINE L1 5573 5945 -239 853 273 21 34 chr17 25689522 25689760 -59748720 - MIR SINE MIR 0 262 28 189 107 0 0 chr17 25691760 25691788 -59746692 + (CA)n Simple_repeat Simple_repeat 2 29 0 739 153 5 138 chr17 25692773 25692905 -59745575 - MER5B DNA MER1_type 0 178 81 2394 38 41 0 chr17 25692905 25693197 -59745283 - AluY SINE Alu -7 304 1 739 153 5 138 chr17 25693197 25693267 -59745213 - MER5B DNA MER1_type -97 81 3 204 40 0 0 chr17 25693316 25693341 -59745139 + (TGAA)n Simple_repeat Simple_repeat 3 27 0 225 325 142 17 chr17 25693343 25693463 -59745017 + MIR SINE MIR 78 212 -50 969 202 34 0 chr17 25693463 25693641 -59744839 + MER5A DNA MER1_type 4 187 -2 687 259 30 51 chr17 25693660 25693776 -59744704 + MIR SINE MIR 1 111 -151 1800 144 7 3 chr17 25693776 25694074 -59744406 - AluSx SINE Alu -13 299 1 687 259 30 51 chr17 25694074 25694193 -59744287 + MIR SINE MIR 111 231 -31 1374 187 0 32 chr17 25694230 25694508 -59743972 - AluJo SINE Alu -43 269 1 532 351 61 9 chr17 25695445 25695676 -59742804 + MIR SINE MIR 20 262 0 23 0 0 0 chr17 25695960 25695983 -59742497 + AT_rich Low_complexity Low_complexity 1 23 0 292 274 44 35 chr17 25696504 25696617 -59741863 + L2 LINE L2 3165 3278 -35 2402 71 0 0 chr17 25696946 25697228 -59741252 + AluSx SINE Alu 4 285 -27 222 0 0 33 chr17 25697228 25697258 -59741222 + (TAAAA)n Simple_repeat Simple_repeat 2 50 0 592 294 231 17 chr17 25697391 25697863 -59740617 + MLT1K LTR MaLR 2 574 -14 334 274 51 17 chr17 25697997 25698114 -59740366 - MIR SINE MIR -130 132 12 2043 151 0 16 chr17 25698202 25698514 -59739966 + AluJb SINE Alu 1 307 -5 1588 145 76 38 chr17 25698587 25698876 -59739604 + AluJo SINE Alu 1 300 -12 217 221 253 0 chr17 25699140 25699235 -59739245 + L2 LINE L2 1692 1810 -1504 315 0 0 0 chr17 25699550 25699585 -59738895 + (TG)n Simple_repeat Simple_repeat 2 36 0 390 239 11 0 chr17 25700198 25700286 -59738194 + L2 LINE L2 3225 3313 0 292 311 28 0 chr17 25700938 25701044 -59737436 + L3b LINE CR1 1290 1398 -185 262 203 125 0 chr17 25701570 25701591 -59736889 + MER3 DNA MER1_type 19 47 -162 296 211 0 0 chr17 25701591 25701643 -59736837 - MER3 DNA MER1_type 0 209 158 392 209 0 0 chr17 25701646 25701713 -59736767 + AluJ/FLAM SINE Alu 1 67 -235 1103 122 117 46 chr17 25702011 25702208 -59736272 + AluJo SINE Alu 80 290 -22 1799 176 24 0 chr17 25703691 25703981 -59734499 - AluJo SINE Alu -15 297 1 1040 183 4 74 chr17 25704010 25704082 -59734398 - MIR SINE MIR -38 224 149 1847 146 9 72 chr17 25704082 25704403 -59734077 - AluJb SINE Alu -5 307 7 1040 183 4 74 chr17 25704403 25704559 -59733921 - MIR SINE MIR -113 149 12 261 139 0 0 chr17 25705068 25705111 -59733369 + (TG)n Simple_repeat Simple_repeat 1 43 0 224 298 133 43 chr17 25707624 25707879 -59730601 - L2 LINE L2 -84 3188 2911 212 321 25 0 chr17 25708218 25708299 -59730181 - L3b LINE CR1 -224 1359 1277 642 252 48 29 chr17 25708477 25708683 -59729797 + MIR SINE MIR 32 241 -21 1947 152 0 39 chr17 25708751 25709060 -59729420 - AluJb SINE Alu -15 297 1 319 55 41 27 chr17 25710426 25710499 -59727981 + (CAAAA)n Simple_repeat Simple_repeat 2 75 0 222 302 132 64 chr17 25711321 25711556 -59726924 + L2 LINE L2 3017 3267 -5 200 216 352 11 chr17 25711560 25711648 -59726832 - MIR SINE MIR -134 128 11 1832 121 69 17 chr17 25711902 25712039 -59726441 + AluJb SINE Alu 1 129 -183 2512 88 0 0 chr17 25712039 25712345 -59726135 + AluSq SINE Alu 1 306 -7 1832 121 69 17 chr17 25712345 25712496 -59725984 + AluJb SINE Alu 129 304 -8 338 329 128 14 chr17 25713068 25713421 -59725059 + L2 LINE L2 2556 2948 -366 233 309 173 0 chr17 25713599 25713709 -59724771 + L2 LINE L2 3182 3310 -3 2403 98 0 3 chr17 25714852 25715157 -59723323 - AluSp SINE Alu -9 304 1 211 321 0 0 chr17 25715225 25715281 -59723199 + L2 LINE L2 3253 3308 -5 476 258 120 0 chr17 25715941 25716108 -59722372 + L2 LINE L2 2684 2870 -444 180 176 0 0 chr17 25717829 25717863 -59720617 + CT-rich Low_complexity Low_complexity 1 34 0 491 246 22 7 chr17 25718078 25718216 -59720264 - MIR SINE MIR -15 247 108 1787 158 42 3 chr17 25718396 25718681 -59719799 + AluJo SINE Alu 1 296 -16 660 311 25 0 chr17 25718842 25719038 -59719442 - MIR SINE MIR -6 256 56 557 161 0 11 chr17 25719782 25719869 -59718611 + AluS SINE Alu 2 87 -226 1616 103 0 0 chr17 25719869 25720072 -59718408 + AluSx SINE Alu 16 218 -94 2062 62 0 4 chr17 25720072 25720316 -59718164 - AluY SINE Alu -68 243 1 329 248 262 14 chr17 25720964 25721105 -59717375 + MIR3 SINE MIR 19 194 -14 1050 194 159 29 chr17 25721793 25722133 -59716347 + L1ME2 LINE L1 5746 6129 -35 2033 85 42 18 chr17 25722134 25722417 -59716063 + AluSc SINE Alu 1 290 -19 1905 179 10 3 chr17 25722579 25722886 -59715594 + AluJb SINE Alu 1 309 -3 2276 102 30 7 chr17 25723158 25723463 -59715017 + AluSx SINE Alu 1 312 0 528 242 74 13 chr17 25723474 25723623 -59714857 + MIR SINE MIR 78 235 -27 569 269 118 60 chr17 25723819 25724027 -59714453 + L1MC4a LINE L1 5333 5527 -2281 474 45 0 148 chr17 25724027 25724065 -59714415 + MADE1 DNA Mariner 2 44 -36 2476 61 10 0 chr17 25724065 25724358 -59714122 - AluSp SINE Alu -17 296 1 2482 48 7 0 chr17 25724359 25724652 -59713828 - AluY SINE Alu -16 295 1 474 45 0 148 chr17 25724652 25724699 -59713781 + MADE1 DNA Mariner 43 76 -4 569 269 118 60 chr17 25724699 25724747 -59713733 + L1MC4a LINE L1 5527 5571 -2237 1642 186 7 10 chr17 25724747 25725038 -59713442 - AluJo SINE Alu -21 291 2 569 269 118 60 chr17 25725038 25725190 -59713290 + L1MC4a LINE L1 5571 5713 -2095 1554 178 25 14 chr17 25725190 25725500 -59712980 + AluJo SINE Alu 1 313 0 2192 100 10 10 chr17 25725500 25725791 -59712689 + AluSx SINE Alu 2 292 -20 569 269 118 60 chr17 25725791 25725928 -59712552 + L1MC4a LINE L1 5712 5914 -1894 23 33 0 0 chr17 25726071 25726101 -59712379 + AT_rich Low_complexity Low_complexity 1 30 0 707 171 17 0 chr17 25726101 25726218 -59712262 - AluSq/x SINE Alu -192 121 3 2043 145 10 6 chr17 25726319 25726630 -59711850 - AluJb SINE Alu 0 312 1 31 76 0 0 chr17 25726638 25726704 -59711776 + AT_rich Low_complexity Low_complexity 1 66 0 2407 62 0 3 chr17 25726744 25727032 -59711448 + AluSg1 SINE Alu 1 287 -22 21 36 0 0 chr17 25727802 25727830 -59710650 + GC_rich Low_complexity Low_complexity 1 28 0 203 325 0 25 chr17 25728002 25728082 -59710398 + MIR SINE MIR 61 138 -70 274 224 38 0 chr17 25728152 25728233 -59710247 + MIR SINE MIR 40 124 -84 202 137 0 59 chr17 25731177 25731228 -59707252 + (CCCG)n Simple_repeat Simple_repeat 2 49 0 186 250 192 58 chr17 25732497 25732617 -59705863 - L2 LINE L2 -4 3268 3133 2180 133 3 3 chr17 25732738 25733040 -59705440 + AluSx SINE Alu 1 302 -10 207 280 0 53 chr17 25733106 25733181 -59705299 - MIR SINE MIR -46 216 146 * 728 212 15 56 chr17 25733178 25733376 -59705104 + MIR SINE MIR 5 194 -68 1846 192 22 23 chr17 25733376 25733915 -59704565 + L1M4 LINE L1 4896 5429 -746 1060 68 0 15 chr17 25733915 25734047 -59704433 + AluYb8 SINE Alu 1 130 -188 6212 132 13 26 chr17 25734063 25734234 -59704246 + L1MC1 LINE L1 5254 5426 -907 2334 101 0 3 chr17 25734234 25734542 -59703938 + AluSc SINE Alu 1 307 -2 6212 132 13 26 chr17 25734542 25735450 -59703030 + L1MC1 LINE L1 5426 6319 -14 2192 134 0 0 chr17 25735452 25735751 -59702729 - AluSx SINE Alu -13 299 1 236 280 93 0 chr17 25735765 25735840 -59702640 + MIR SINE MIR 175 256 -6 317 298 81 8 chr17 25735843 25735967 -59702513 - MIR SINE MIR -110 152 20 2429 78 3 3 chr17 25736010 25736303 -59702177 - AluSq SINE Alu -12 301 9 612 262 30 20 chr17 25736709 25736911 -59701569 - MIR SINE MIR 0 262 59 611 271 6 18 chr17 25737009 25737070 -59701410 + MIR SINE MIR 95 155 -107 2290 57 3 44 chr17 25737070 25737391 -59701089 + AluY SINE Alu 1 309 0 611 271 6 18 chr17 25737391 25737498 -59700982 + MIR SINE MIR 155 262 0 413 276 55 16 chr17 25737498 25737625 -59700855 + MIR SINE MIR 106 237 -25 1359 164 57 166 chr17 25737950 25738137 -59700343 - L1MC5 LINE L1 -57 7904 7698 2351 93 20 0 chr17 25738137 25738438 -59700042 + AluY SINE Alu 1 307 -4 1359 164 57 166 chr17 25738438 25738459 -59700021 - L1MC5 LINE L1 -263 7698 7676 1861 139 13 58 chr17 25738459 25738769 -59699711 + AluSx SINE Alu 1 296 -16 1924 146 16 25 chr17 25738769 25739084 -59699396 + AluSx SINE Alu 1 312 0 1359 164 57 166 chr17 25739084 25739140 -59699340 - L1MC5 LINE L1 -284 7677 7616 1778 154 0 18 chr17 25739140 25739420 -59699060 - AluJb SINE Alu -32 280 6 1359 164 57 166 chr17 25739420 25739482 -59698998 - L1MC5 LINE L1 -345 7616 7549 2583 61 3 0 chr17 25739482 25739777 -59698703 - AluSp SINE Alu -17 296 1 1359 164 57 166 chr17 25739777 25740149 -59698331 - L1MC5 LINE L1 -412 7549 7279 398 268 60 56 chr17 25740219 25740469 -59698011 + L1PB3 LINE L1 5713 5963 -191 * 2062 144 20 18 chr17 25740251 25740646 -59697834 + L1MB4 LINE L1 5746 6141 -39 634 120 0 0 chr17 25740702 25740802 -59697678 + FRAM SINE Alu 67 166 -10 230 105 0 0 chr17 25740802 25740840 -59697640 + L1MB4 LINE L1 6141 6178 -2 327 314 77 12 chr17 25741107 25741276 -59697204 + MIR SINE MIR 32 211 -51 1484 135 54 0 chr17 25741333 25741555 -59696925 + AluJb SINE Alu 61 294 -18 528 175 87 0 chr17 25741664 25741767 -59696713 + MER81 DNA DNA 1 112 -2 642 339 119 24 chr17 25741870 25742283 -59696197 + L2 LINE L2 2069 2564 -750 2076 137 27 0 chr17 25742283 25742575 -59695905 + AluSx SINE Alu 1 300 -12 642 339 119 24 chr17 25742575 25742790 -59695690 + L2 LINE L2 2564 2757 -557 825 160 90 0 chr17 25742801 25742957 -59695523 - MER58B DNA MER1_type 0 341 172 1067 188 0 0 chr17 25742959 25743135 -59695345 + AluSg/x SINE Alu 136 311 -1 2134 146 0 0 chr17 25743233 25743535 -59694945 - AluJb SINE Alu -9 303 2 299 389 13 13 chr17 25743624 25743773 -59694707 + L2 LINE L2 2932 3080 -192 725 244 56 9 chr17 25743944 25744157 -59694323 - MIR SINE MIR -38 224 2 404 264 63 57 chr17 25744427 25744586 -59693894 - MIR SINE MIR -74 188 29 950 133 7 0 chr17 25744810 25744945 -59693535 + AluJb SINE Alu 1 136 -176 2309 114 7 0 chr17 25744951 25745259 -59693221 + AluSp SINE Alu 1 310 -3 257 180 0 16 chr17 25745259 25745320 -59693160 + GA-rich Low_complexity Low_complexity 1 60 0 652 293 38 19 chr17 25745596 25745862 -59692618 - L1ME3A LINE L1 -318 5852 5582 2222 116 3 0 chr17 25745870 25746164 -59692316 - AluSx SINE Alu -14 298 4 185 368 16 40 chr17 25746216 25746341 -59692139 + L3b LINE CR1 1326 1447 -136 539 276 40 17 chr17 25746793 25746966 -59691514 - MIR SINE MIR -52 210 34 964 228 51 34 chr17 25747477 25747714 -59690766 - MIR SINE MIR -21 241 1 1007 171 6 0 chr17 25749452 25749627 -59688853 - AluJo SINE Alu -5 307 132 1798 121 3 37 chr17 25749640 25749937 -59688543 + AluSx SINE Alu 2 288 -24 261 0 0 0 chr17 25749939 25749968 -59688512 + (TG)n Simple_repeat Simple_repeat 2 30 0 527 31 119 0 chr17 25749970 25750130 -59688350 + (TA)n Simple_repeat Simple_repeat 2 180 0 813 134 0 37 chr17 25750146 25750280 -59688200 - AluJo SINE Alu -183 129 1 255 311 113 26 chr17 25750416 25750567 -59687913 + L2 LINE L2 1990 2153 -1161 2076 121 0 7 chr17 25750639 25750944 -59687536 + AluSx SINE Alu 1 303 -9 918 252 19 0 chr17 25750972 25751182 -59687298 + MIR SINE MIR 49 262 0 398 353 93 7 chr17 25751182 25751471 -59687009 + L2 LINE L2 2364 2677 -637 1183 105 6 0 chr17 25751490 25751652 -59686828 - AluSg/x SINE Alu -16 296 134 1798 154 3 0 chr17 25751716 25752040 -59686440 + AluJb SINE Alu 1 325 0 208 327 117 24 chr17 25752043 25752343 -59686137 + L2 LINE L2 2739 3061 -211 193 339 16 0 chr17 25752449 25752511 -59685969 + L2 LINE L2 3139 3201 -71 1703 144 10 44 chr17 25755531 25755829 -59682651 - AluJb SINE Alu -24 288 1 202 219 0 0 chr17 25755872 25755913 -59682567 + (TGAA)n Simple_repeat Simple_repeat 1 41 0 603 200 17 17 chr17 25756604 25756724 -59681756 + MIR SINE MIR 28 147 -115 1090 160 33 74 chr17 25756790 25756992 -59681488 + L1MB4 LINE L1 5944 6138 -42 2190 95 0 0 chr17 25756992 25757296 -59681184 - AluSx SINE Alu 0 304 1 1090 160 33 74 chr17 25757296 25757335 -59681145 + L1MB4 LINE L1 6138 6177 -3 2024 125 7 0 chr17 25757345 25757640 -59680840 + AluSx SINE Alu 1 297 -15 2320 97 0 0 chr17 25757641 25757949 -59680531 + AluSx SINE Alu 1 308 -4 186 196 0 98 chr17 25757998 25758049 -59680431 + MIR SINE MIR 217 262 0 1811 135 46 16 chr17 25758267 25758570 -59679910 - AluJb SINE Alu 0 312 1 896 223 28 51 chr17 25759066 25759281 -59679199 - MER20 DNA MER1_type -9 210 1 2172 105 0 0 chr17 25759368 25759664 -59678816 + AluSx SINE Alu 1 296 -16 2907 48 0 0 chr17 25759665 25760018 -59678462 + L1PA8 LINE L1 5820 6172 0 1158 134 27 103 chr17 25760505 25760649 -59677831 + MER96B DNA MER1_type? 177 294 -123 749 190 0 0 chr17 25760649 25760770 -59677710 + FLAM_A SINE Alu 1 121 -12 1158 134 27 103 chr17 25760770 25760886 -59677594 + MER96B DNA MER1_type? 294 417 0 611 298 78 16 chr17 25760939 25761184 -59677296 + Charlie8 DNA MER1_type 19 278 -2139 3643 186 65 17 chr17 25761224 25761613 -59676867 - MER63C DNA MER1_type -130 930 561 2206 99 3 0 chr17 25761613 25761915 -59676565 + AluSp SINE Alu 1 303 -10 3643 186 65 17 chr17 25761915 25762305 -59676175 - MER63C DNA MER1_type -499 561 113 237 260 0 14 chr17 25762309 25762403 -59676077 - MIR3 SINE MIR -113 149 12 274 240 107 0 chr17 25763210 25763285 -59675195 + MIR SINE MIR 44 126 -82 656 264 111 21 chr17 25763294 25763529 -59674951 - MIR SINE MIR -6 256 1 946 181 0 0 chr17 25763771 25763937 -59674543 - FRAM SINE Alu -11 165 1 1379 201 37 0 chr17 25764441 25764710 -59673770 + AluJb SINE Alu 4 282 -30 543 241 63 68 chr17 25764826 25764898 -59673582 - MIR SINE MIR 0 262 191 2147 91 13 10 chr17 25764898 25765207 -59673273 - AluSx SINE Alu -2 310 1 543 241 63 68 chr17 25765207 25765325 -59673155 - MIR SINE MIR -71 191 73 258 175 0 35 chr17 25765884 25765941 -59672539 + MIR SINE MIR 72 126 -82 599 277 36 15 chr17 25766020 25766215 -59672265 + MLT1J LTR MaLR 1 199 -312 * 1503 246 46 35 chr17 25766209 25766603 -59671877 - MLT1H1 LTR MaLR -99 456 59 396 0 0 0 chr17 25766618 25766662 -59671818 + (CA)n Simple_repeat Simple_repeat 2 45 0 271 150 0 0 chr17 25766765 25766805 -59671675 - MLT1H1 LTR MaLR -530 60 21 1610 171 3 7 chr17 25766806 25767099 -59671381 + AluJo SINE Alu 2 293 -19 438 286 16 0 chr17 25767116 25767242 -59671238 + MLT1J LTR MaLR 384 511 0 182 359 0 0 chr17 25767513 25767566 -59670914 + L2 LINE L2 3176 3228 -44 297 349 50 25 chr17 25767736 25767974 -59670506 - L2 LINE L2 -785 2529 2286 283 302 67 62 chr17 25768077 25768256 -59670224 + MIR3 SINE MIR 17 196 -12 303 28 0 0 chr17 25768335 25768371 -59670109 + (CAA)n Simple_repeat Simple_repeat 2 37 0 215 253 173 0 chr17 25768635 25768710 -59669770 - L2 LINE L2 -17 3255 3168 255 31 0 0 chr17 25768794 25768826 -59669654 + (TG)n Simple_repeat Simple_repeat 2 33 0 1933 136 0 16 chr17 25768860 25769169 -59669311 - AluSx SINE Alu -8 304 1 1687 171 0 10 chr17 25769170 25769469 -59669011 - AluJo SINE Alu -16 296 1 456 226 0 0 chr17 25769481 25769565 -59668915 - MIR3 SINE MIR -11 197 114 808 151 0 22 chr17 25769568 25769707 -59668773 + AluJo SINE Alu 1 136 -176 2335 57 0 0 chr17 25769707 25770032 -59668448 + AluY SINE Alu 1 325 0 441 262 78 0 chr17 25770065 25770206 -59668274 - MIR SINE MIR -36 226 75 388 311 43 24 chr17 25770241 25770405 -59668075 - MER5A DNA MER1_type -16 173 7 486 267 203 0 chr17 25770944 25771131 -59667349 + MIR SINE MIR 29 253 -9 2407 60 0 0 chr17 25771243 25771542 -59666938 + AluSp SINE Alu 1 299 -14 1506 178 57 4 chr17 25771562 25771843 -59666637 + AluJo SINE Alu 1 296 -6 1861 230 82 83 chr17 25771899 25772166 -59666314 + L1ME3A LINE L1 5508 5774 -396 2122 110 3 0 chr17 25772166 25772467 -59666013 - AluSq SINE Alu -11 302 1 1861 230 82 83 chr17 25772467 25772479 -59666001 + L1ME3A LINE L1 5774 5785 -385 1886 125 11 0 chr17 25772479 25772818 -59665662 - AluSq SINE Alu 0 342 1 1861 230 82 83 chr17 25772818 25773198 -59665282 + L1ME3A LINE L1 5785 6168 -2 730 190 0 29 chr17 25773840 25773977 -59664503 + AluJo/FLAM SINE Alu 1 133 -169 2165 113 0 0 chr17 25773979 25774271 -59664209 - AluSc SINE Alu -17 292 1 1930 123 10 10 chr17 25774272 25774573 -59663907 - AluSx SINE Alu -11 301 1 1860 114 114 0 chr17 25774632 25774912 -59663568 + AluSx SINE Alu 1 312 0 2389 74 0 0 chr17 25775002 25775313 -59663167 - AluY SINE Alu 0 311 1 852 204 6 44 chr17 25775412 25775450 -59663030 - AluJo/FRAM SINE Alu -5 307 269 1759 146 6 44 chr17 25775450 25775585 -59662895 + AluJb SINE Alu 2 141 -171 2653 23 0 0 chr17 25775585 25775888 -59662592 + AluY SINE Alu 1 303 -8 1759 146 6 44 chr17 25775888 25776068 -59662412 + AluJb SINE Alu 141 305 -7 852 204 6 44 chr17 25776068 25776210 -59662270 - AluJo/FRAM SINE Alu -43 269 134 710 292 94 26 chr17 25776222 25776818 -59661662 + L1MEd LINE L1 967 1688 -802 780 183 8 0 chr17 25777171 25777302 -59661178 + AluJo/FLAM SINE Alu 1 132 -170 2112 112 0 10 chr17 25777303 25777615 -59660865 + AluSx SINE Alu 4 312 0 258 243 81 54 chr17 25777706 25777817 -59660663 + L1ME LINE L1 5772 5885 -285 2218 92 0 7 chr17 25777828 25778122 -59660358 - AluY SINE Alu -19 292 1 2156 102 3 3 chr17 25778172 25778467 -59660013 - AluSx SINE Alu -17 295 1 269 26 26 0 chr17 25778476 25778514 -59659966 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 2148 92 3 0 chr17 25778516 25778799 -59659681 - AluSx SINE Alu -24 288 5 1642 141 6 73 chr17 25778830 25779157 -59659323 + AluJb SINE Alu 1 305 -7 447 263 73 60 chr17 25779241 25779389 -59659091 + MLT1L LTR MaLR 381 535 -80 2302 54 3 17 chr17 25779389 25779687 -59658793 - AluY SINE Alu -16 295 2 447 263 73 60 chr17 25779687 25779770 -59658710 + MLT1L LTR MaLR 535 615 0 415 290 81 64 chr17 25779771 25780054 -59658426 - L2 LINE L2 -746 2568 2281 1645 199 75 55 chr17 25780054 25780237 -59658243 + MLT1C LTR MaLR 6 184 -283 2165 123 0 0 chr17 25780237 25780547 -59657933 + AluSx SINE Alu 1 310 -2 1645 199 75 55 chr17 25780547 25780816 -59657664 + MLT1C LTR MaLR 184 467 0 739 314 80 59 chr17 25780816 25781463 -59657017 - L2 LINE L2 -1047 2267 1607 1369 167 129 20 chr17 25781530 25781824 -59656656 + L1MC3 LINE L1 7106 7431 -354 1544 155 38 24 chr17 25781824 25781944 -59656536 + AluJo SINE Alu 1 118 -194 2047 129 3 0 chr17 25781944 25782255 -59656225 + AluSx SINE Alu 1 312 0 1544 155 38 24 chr17 25782255 25782425 -59656055 + AluJo SINE Alu 118 295 -17 2266 60 0 0 chr17 25782427 25782749 -59655731 + AluY SINE Alu 1 322 0 1730 153 197 60 chr17 25782771 25783151 -59655329 + MLT1D LTR MaLR 1 444 -61 2048 114 0 3 chr17 25783151 25783465 -59655015 - AluSx SINE Alu 0 312 1 1730 153 197 60 chr17 25783465 25783501 -59654979 + MLT1D LTR MaLR 444 474 -31 1082 129 0 28 chr17 25783501 25783672 -59654808 - AluJb SINE Alu -11 301 134 1472 191 3 46 chr17 25783672 25783765 -59654715 - AluJo SINE Alu -2 310 215 2344 83 0 0 chr17 25783765 25784065 -59654415 - AluSg SINE Alu -10 300 1 1472 191 3 46 chr17 25784065 25784295 -59654185 - AluJo SINE Alu -97 215 1 2399 118 8 0 chr17 25784316 25784673 -59653807 - L1PB3 LINE L1 -1 6153 5794 2164 112 0 10 chr17 25784673 25784987 -59653493 + AluSx SINE Alu 1 311 -1 634 52 0 0 chr17 25784987 25785064 -59653416 - L1P5 LINE L1 -564 5590 5514 229 135 0 0 chr17 25785064 25785101 -59653379 + MLT1D LTR MaLR 467 503 -2 1771 269 82 23 chr17 25785102 25785148 -59653332 + HAL1 LINE L1 1109 1151 -1356 2019 114 6 19 chr17 25785148 25785463 -59653017 + AluJb SINE Alu 1 311 -1 1771 269 82 23 chr17 25785463 25785796 -59652684 + HAL1 LINE L1 1151 1463 -1044 2301 71 10 0 chr17 25785796 25786091 -59652389 + AluSp SINE Alu 1 298 -15 1771 269 82 23 chr17 25786091 25786454 -59652026 + HAL1 LINE L1 1463 1896 -611 1236 165 0 0 chr17 25786454 25786648 -59651832 + AluJb SINE Alu 1 194 -118 1536 65 0 15 chr17 25786745 25786944 -59651536 - L1PA5 LINE L1 -3 6151 5956 493 227 77 49 chr17 25786967 25787187 -59651293 + HAL1 LINE L1 2011 2223 -284 2336 81 0 10 chr17 25787187 25787497 -59650983 - AluSp SINE Alu -6 307 1 1941 137 3 10 chr17 25787498 25787804 -59650676 - AluJb SINE Alu -8 304 1 493 227 77 49 chr17 25787804 25787912 -59650568 + HAL1 LINE L1 2222 2400 -107 2251 102 0 10 chr17 25787940 25788253 -59650227 + AluSq SINE Alu 1 310 -3 1794 171 3 3 chr17 25788669 25788973 -59649507 + AluJo SINE Alu 1 304 -8 2031 108 7 3 chr17 25789046 25789342 -59649138 - AluSx SINE Alu -3 309 13 2247 61 44 3 chr17 25790049 25790346 -59648134 + AluY SINE Alu 2 310 -1 1891 138 0 3 chr17 25790552 25790842 -59647638 + AluSx SINE Alu 11 299 -13 2277 97 7 0 chr17 25790844 25791154 -59647326 + AluSx SINE Alu 1 312 0 438 309 38 29 chr17 25791352 25791562 -59646918 + MIR SINE MIR 5 216 -46 245 280 40 64 chr17 25791617 25791742 -59646738 - L2 LINE L2 -206 3066 2945 693 212 54 27 chr17 25791749 25791933 -59646547 - MER53 DNA DNA 0 189 1 365 268 210 7 chr17 25793213 25793351 -59645129 + MIR SINE MIR 97 262 0 270 0 0 0 chr17 25793978 25794008 -59644472 + (TTCA)n Simple_repeat Simple_repeat 2 31 0 1892 164 0 3 chr17 25794066 25794377 -59644103 + AluJb SINE Alu 1 310 -2 280 284 0 14 chr17 25794396 25794470 -59644010 - L2 LINE L2 -73 3240 3168 1439 118 45 5 chr17 25795009 25795230 -59643250 - MER30 DNA MER1_type 0 230 1 2511 51 0 10 chr17 25795398 25795710 -59642770 - AluY SINE Alu -1 310 2 251 288 100 12 chr17 25795795 25795875 -59642605 - MIR SINE MIR -85 123 37 2207 93 3 7 chr17 25796110 25796410 -59642070 + AluSq SINE Alu 1 299 -14 458 268 34 121 chr17 25796930 25797195 -59641285 + MIR SINE MIR 21 262 0 241 211 70 0 chr17 25798256 25798327 -59640153 + CT-rich Low_complexity Low_complexity 3 78 0 720 188 8 8 chr17 25798354 25798487 -59639993 + MIR SINE MIR 101 233 -29 2549 65 3 0 chr17 25798801 25799107 -59639373 + AluSp SINE Alu 1 307 -6 2608 69 0 0 chr17 25799326 25799631 -59638849 - AluSx SINE Alu -7 305 1 208 241 80 80 chr17 25799669 25799694 -59638786 - MIR SINE MIR -123 139 115 1625 143 4 8 chr17 25799694 25799938 -59638542 + AluSx SINE Alu 44 286 -26 208 241 80 80 chr17 25799938 25800024 -59638456 - MIR SINE MIR -146 116 28 1265 115 111 5 chr17 25802193 25802401 -59636079 + MER30 DNA MER1_type 1 230 0 1645 160 53 3 chr17 25802463 25802745 -59635735 - AluJb SINE Alu -16 296 1 232 271 57 57 chr17 25803670 25803810 -59634670 + L3 LINE CR1 1435 1574 -3 702 181 142 10 chr17 25803954 25804159 -59634321 - L1ME3 LINE L1 -9 6153 5922 2256 79 20 0 chr17 25805519 25805811 -59632669 - AluSp SINE Alu -15 298 1 1905 132 21 3 chr17 25805823 25806111 -59632369 - AluJo SINE Alu -16 296 4 21 0 0 0 chr17 25806596 25806617 -59631863 + AT_rich Low_complexity Low_complexity 1 21 0 2213 94 21 0 chr17 25810266 25810553 -59627927 + AluSx SINE Alu 1 293 -19 288 111 0 0 chr17 25812355 25812400 -59626080 + (CA)n Simple_repeat Simple_repeat 1 45 0 24 53 0 0 chr17 25813337 25813375 -59625105 + AT_rich Low_complexity Low_complexity 1 38 0 182 37 37 0 chr17 25813696 25813723 -59624757 + (TA)n Simple_repeat Simple_repeat 1 28 0 23 33 0 0 chr17 25814320 25814350 -59624130 + AT_rich Low_complexity Low_complexity 1 30 0 276 77 0 0 chr17 25815342 25815381 -59623099 + (TA)n Simple_repeat Simple_repeat 2 40 0 22 0 0 0 chr17 25815567 25815589 -59622891 + AT_rich Low_complexity Low_complexity 1 22 0 2855 16 0 0 chr17 25816257 25816568 -59621912 - AluY SINE Alu 0 311 1 194 81 27 0 chr17 25816581 25816618 -59621862 + (TTATA)n Simple_repeat Simple_repeat 5 42 0 2066 114 20 7 chr17 25816936 25817233 -59621247 - AluSq SINE Alu -12 301 1 237 252 266 14 chr17 25817302 25817445 -59621035 + MIR3 SINE MIR 19 197 -11 2409 85 0 0 chr17 25817877 25818170 -59620310 - AluSq SINE Alu -20 293 1 842 105 0 77 chr17 25818176 25818319 -59620161 - FLAM_C SINE Alu 0 133 2 650 161 148 27 chr17 25818701 25818850 -59619630 - AluJo SINE Alu -84 228 62 2339 76 3 0 chr17 25818871 25819160 -59619320 - AluSq SINE Alu -18 295 6 2111 106 0 52 chr17 25819465 25819795 -59618685 - AluSp SINE Alu 0 313 1 1267 135 156 30 chr17 25820471 25820708 -59617772 - AluJo SINE Alu -15 297 31 2247 65 0 0 chr17 25820723 25820986 -59617494 - AluY SINE Alu -48 263 1 655 143 95 40 chr17 25821664 25821790 -59616690 + FLAM_C SINE Alu 1 133 0 2236 110 0 7 chr17 25822223 25822533 -59615947 + AluSg SINE Alu 3 310 0 2062 112 0 7 chr17 25822755 25823032 -59615448 + AluSx SINE Alu 1 275 -37 303 93 0 0 chr17 25823042 25823085 -59615395 + (GGGGA)n Simple_repeat Simple_repeat 4 46 0 2438 76 0 3 chr17 25823204 25823506 -59614974 - AluY SINE Alu -10 301 1 653 141 339 11 chr17 25823617 25823794 -59614686 - MER46A DNA MER2_type 0 236 2 1551 105 23 146 chr17 25823818 25824026 -59614454 - AluY SINE Alu 0 301 150 2171 90 11 4 chr17 25824026 25824304 -59614176 - AluSg SINE Alu -30 280 1 1551 105 23 146 chr17 25824304 25824438 -59614042 - AluY SINE Alu -151 150 1 300 27 0 0 chr17 25824464 25824501 -59613979 + (CA)n Simple_repeat Simple_repeat 2 38 0 556 197 13 118 chr17 25825136 25825170 -59613310 + MER58A DNA MER1_type 40 76 -2344 1506 176 48 28 chr17 25825170 25825459 -59613021 + AluJo SINE Alu 5 299 -13 556 197 13 118 chr17 25825459 25825576 -59612904 + MER58A DNA MER1_type 76 175 -49 2002 120 20 17 chr17 25825990 25826290 -59612190 - AluSq SINE Alu -12 301 1 294 319 35 40 chr17 25826550 25826712 -59611768 + L2 LINE L2 2554 2715 -599 2408 74 0 0 chr17 25826712 25826996 -59611484 + AluSx SINE Alu 1 284 -28 180 0 0 0 chr17 25826996 25827016 -59611464 + (TA)n Simple_repeat Simple_repeat 2 21 0 294 319 35 40 chr17 25827016 25827078 -59611402 + L2 LINE L2 2713 2778 -536 1858 97 0 20 chr17 25827356 25827604 -59610876 - AluSx SINE Alu -69 243 1 311 250 0 0 chr17 25827792 25827868 -59610612 + MER116 DNA Mariner 1 76 -4 1930 130 18 0 chr17 25828001 25828285 -59610195 - AluSx SINE Alu -20 292 4 2100 115 13 13 chr17 25828697 25829009 -59609471 + AluSq SINE Alu 1 312 -1 2508 48 0 3 chr17 25829222 25829513 -59608967 - AluY SINE Alu -21 290 1 25 0 0 0 chr17 25830305 25830330 -59608150 + AT_rich Low_complexity Low_complexity 1 25 0 1172 208 95 15 chr17 25830513 25830777 -59607703 - AluJo SINE Alu -15 287 3 1921 147 13 13 chr17 25830781 25831081 -59607399 - AluSx SINE Alu -12 300 1 589 206 0 0 chr17 25831411 25831513 -59606967 + AluJ/FLAM SINE Alu 1 102 -210 660 178 0 0 chr17 25831513 25831620 -59606860 + AluJo/FRAM SINE Alu 144 250 -62 1154 172 5 36 chr17 25831620 25831670 -59606810 + AluJo SINE Alu 85 135 -177 2157 121 10 7 chr17 25831670 25831975 -59606505 + AluSx SINE Alu 1 306 -6 1734 130 0 82 chr17 25831979 25832309 -59606171 + AluSx SINE Alu 1 303 -9 1154 172 5 36 chr17 25832309 25832474 -59606006 + AluJo SINE Alu 138 298 -14 991 134 30 18 chr17 25832512 25832676 -59605804 + FRAM SINE Alu 1 166 -10 2370 73 7 0 chr17 25832739 25833027 -59605453 - AluY SINE Alu -20 291 2 401 224 12 0 chr17 25833159 25833244 -59605236 + MSTD LTR MaLR 258 343 -53 2152 102 23 16 chr17 25833245 25833549 -59604931 + AluSg SINE Alu 5 310 0 836 155 0 7 chr17 25834305 25834447 -59604033 - AluJo/FRAM SINE Alu -13 299 159 698 122 0 0 chr17 25834450 25834548 -59603932 - AluJ/FLAM SINE Alu -213 99 2 2536 89 0 0 chr17 25835390 25835703 -59602777 + AluSq SINE Alu 1 313 0 2195 101 3 0 chr17 25835987 25836275 -59602205 + AluSg SINE Alu 1 289 -21 2335 99 10 0 chr17 25836284 25836586 -59601894 + AluSc SINE Alu 5 309 0 268 279 123 0 chr17 25838738 25838860 -59599620 - MIR SINE MIR -2 260 124 2382 68 3 7 chr17 25839016 25839310 -59599170 - AluY SINE Alu -18 293 1 293 228 147 44 chr17 25839598 25839734 -59598746 - MIR SINE MIR -111 151 2 1442 177 42 24 chr17 25839844 25840132 -59598348 + AluJb SINE Alu 10 302 -10 2217 119 3 0 chr17 25840277 25840579 -59597901 + AluSq SINE Alu 1 303 -10 1499 128 155 8 chr17 25840892 25841150 -59597330 - AluSg SINE Alu -14 296 1 1790 146 42 36 chr17 25841342 25841650 -59596830 + AluSx SINE Alu 3 312 0 210 71 0 0 chr17 25842002 25842030 -59596450 + (A)n Simple_repeat Simple_repeat 1 28 0 24 0 0 0 chr17 25843599 25843623 -59594857 + GC_rich Low_complexity Low_complexity 1 24 0 23 0 0 0 chr17 25843797 25843820 -59594660 + GC_rich Low_complexity Low_complexity 1 23 0 44 35 0 0 chr17 25843834 25843892 -59594588 + GC_rich Low_complexity Low_complexity 1 58 0 202 284 30 0 chr17 25844679 25844746 -59593734 + C-rich Low_complexity Low_complexity 1 69 0 255 254 0 0 chr17 25844871 25844993 -59593487 + (TGG)n Simple_repeat Simple_repeat 1 122 0 180 97 0 0 chr17 25845478 25845509 -59592971 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 300 271 113 28 chr17 25846073 25846250 -59592230 + L1ME3A LINE L1 5959 6150 -20 2252 164 74 0 chr17 25846260 25846681 -59591799 - L1MB3 LINE L1 0 6183 5732 2086 112 22 0 chr17 25846921 25847218 -59591262 - AluSp SINE Alu 0 303 1 1687 168 50 3 chr17 25847365 25847663 -59590817 + AluJb SINE Alu 1 312 0 2260 77 0 11 chr17 25848158 25848444 -59590036 + AluSc SINE Alu 1 283 -26 1219 170 15 93 chr17 25848662 25848839 -59589641 - AluJb SINE Alu -11 301 159 276 91 0 0 chr17 25848839 25848883 -59589597 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 1219 170 15 93 chr17 25848883 25849029 -59589451 - AluJb SINE Alu -153 159 3 2305 106 3 0 chr17 25849154 25849456 -59589024 - AluSc SINE Alu -6 303 1 22 43 0 21 chr17 25849657 25849675 -59588805 + AT_rich Low_complexity Low_complexity 1 18 -28 2051 115 7 0 chr17 25849675 25849953 -59588527 + AluSq SINE Alu 1 280 -33 22 43 0 21 chr17 25849953 25849981 -59588499 + AT_rich Low_complexity Low_complexity 18 46 0 1561 169 8 23 chr17 25849982 25850248 -59588232 + AluJb SINE Alu 1 262 -50 27 73 0 0 chr17 25850268 25850323 -59588157 + AT_rich Low_complexity Low_complexity 1 55 0 2036 101 7 42 chr17 25850355 25850663 -59587817 - AluSx SINE Alu -15 297 1 181 232 0 54 chr17 25850678 25850734 -59587746 - L2 LINE L2 0 3313 3261 21 36 0 0 chr17 25850734 25850762 -59587718 + AT_rich Low_complexity Low_complexity 1 28 0 367 276 10 0 chr17 25850880 25850978 -59587502 + MIR3 SINE MIR 105 203 -5 473 333 13 21 chr17 25851437 25851674 -59586806 + MIR SINE MIR 5 239 -23 2134 117 0 63 chr17 25851681 25851868 -59586612 - AluSx SINE Alu 0 312 154 2345 104 0 3 chr17 25851868 25852177 -59586303 - AluSg SINE Alu -2 308 1 2134 117 0 63 chr17 25852177 25852322 -59586158 - AluSx SINE Alu -158 154 1 289 133 0 55 chr17 25852322 25852387 -59586093 - AluJb SINE Alu -166 136 84 2169 114 7 3 chr17 25852566 25852863 -59585617 + AluSx SINE Alu 1 298 -14 2279 104 0 3 chr17 25852919 25853216 -59585264 + AluSq SINE Alu 1 296 -17 1561 167 3 82 chr17 25853374 25853507 -59584973 + AluJo SINE Alu 1 143 -169 2686 40 0 0 chr17 25853507 25853808 -59584672 - AluY SINE Alu -10 301 1 1561 167 3 82 chr17 25853808 25854003 -59584477 + AluJo SINE Alu 143 303 -9 1932 151 3 22 chr17 25854280 25854591 -59583889 + AluJb SINE Alu 1 305 -7 1282 204 164 76 chr17 25854676 25855094 -59583386 - MLT1F1 LTR MaLR -1 566 97 2089 108 31 0 chr17 25855094 25855380 -59583100 + AluSx SINE Alu 1 295 -17 1282 204 164 76 chr17 25855380 25855473 -59583007 - MLT1F1 LTR MaLR -470 97 14 22 35 0 0 chr17 25855629 25855658 -59582822 + AT_rich Low_complexity Low_complexity 1 29 0 667 275 17 47 chr17 25856048 25856173 -59582307 + L1MD2 LINE L1 6133 6260 -99 2124 111 7 26 chr17 25856173 25856480 -59582000 + AluSx SINE Alu 1 301 -11 667 275 17 47 chr17 25856480 25856562 -59581918 + L1MD2 LINE L1 6260 6335 -24 1673 137 107 0 chr17 25856562 25856825 -59581655 - AluSg SINE Alu -19 291 1 667 275 17 47 chr17 25856825 25856849 -59581631 + L1MD2 LINE L1 6335 6358 -1 21 57 0 0 chr17 25856890 25856925 -59581555 + AT_rich Low_complexity Low_complexity 1 35 0 2096 78 37 0 chr17 25856942 25857234 -59581246 + AluSg SINE Alu 2 303 0 2271 101 0 0 chr17 25857289 25857586 -59580894 + AluSc SINE Alu 1 297 -12 1666 146 3 74 chr17 25857591 25857900 -59580580 + AluJo SINE Alu 1 287 -25 31 0 0 0 chr17 25857900 25857931 -59580549 + AT_rich Low_complexity Low_complexity 1 31 0 2618 46 7 3 chr17 25857933 25858239 -59580241 + AluY SINE Alu 1 307 -4 1730 85 0 5 chr17 25858246 25858470 -59580010 + AluSc SINE Alu 72 294 -15 550 220 52 94 chr17 25858730 25859016 -59579464 - MLT1D LTR MaLR -231 274 1 539 163 0 0 chr17 25859016 25859102 -59579378 + MER97c DNA MER1_type? 61 146 -944 1557 108 132 16 chr17 25859102 25859387 -59579093 - AluSg1 SINE Alu 0 314 1 1661 166 6 38 chr17 25859389 25859708 -59578772 - AluJb SINE Alu -3 309 1 32 0 0 0 chr17 25859711 25859743 -59578737 + AT_rich Low_complexity Low_complexity 1 32 0 1939 135 0 21 chr17 25859756 25860045 -59578435 - AluSx SINE Alu -29 283 1 572 263 128 17 chr17 25860215 25860512 -59577968 + L2 LINE L2 2972 3301 -12 787 302 114 29 chr17 25861067 25861269 -59577211 + L2 LINE L2 2145 2328 -986 2192 128 0 0 chr17 25861269 25861566 -59576914 + AluSq SINE Alu 1 297 -16 183 42 0 0 chr17 25861569 25861593 -59576887 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 787 302 114 29 chr17 25861593 25861870 -59576610 + L2 LINE L2 2329 2669 -645 274 286 88 11 chr17 25862264 25862355 -59576125 + L2 LINE L2 3175 3272 0 1874 149 3 7 chr17 25862432 25862721 -59575759 - AluJb SINE Alu -24 288 1 2236 79 14 7 chr17 25863238 25863554 -59574926 - AluSx SINE Alu 0 318 1 2003 113 38 20 chr17 25864367 25864660 -59573820 - AluSx SINE Alu -14 298 1 1105 214 175 8 chr17 25864758 25865015 -59573465 + AluSg SINE Alu 1 300 0 1822 115 78 0 chr17 25865061 25865330 -59573150 + AluSx SINE Alu 1 290 -22 300 280 71 59 chr17 25865345 25865386 -59573094 + HAL1b LINE L1 393 432 -1965 2161 118 0 0 chr17 25865386 25865682 -59572798 - AluSx SINE Alu -6 306 11 300 280 71 59 chr17 25865682 25865923 -59572557 + HAL1b LINE L1 432 1710 -687 2535 71 0 0 chr17 25865931 25866239 -59572241 + AluY SINE Alu 1 308 -3 1974 95 80 0 chr17 25866631 25866905 -59571575 + AluY SINE Alu 1 296 -15 1934 136 0 48 chr17 25867073 25867257 -59571223 + AluJb SINE Alu 1 165 -147 2401 94 0 0 chr17 25867257 25867564 -59570916 - AluSx SINE Alu -5 307 1 1934 136 0 48 chr17 25867564 25867689 -59570791 + AluJb SINE Alu 165 295 -17 517 291 74 5 chr17 25867744 25867933 -59570547 + MIR SINE MIR 5 206 -56 1963 121 0 7 chr17 25867995 25868267 -59570213 - AluSx SINE Alu -23 289 20 1866 154 0 55 chr17 25868329 25868473 -59570007 + AluJb SINE Alu 1 151 -161 2260 118 3 0 chr17 25868473 25868779 -59569701 + AluSx SINE Alu 1 307 -5 1866 154 0 55 chr17 25868779 25868964 -59569516 + AluJb SINE Alu 151 312 0 490 207 12 95 chr17 25868964 25869133 -59569347 + L1ME4a LINE L1 5965 6119 -2 2317 119 0 0 chr17 25869196 25869506 -59568974 + AluSg SINE Alu 1 310 0 227 229 10 83 chr17 25870038 25870134 -59568346 - L2 LINE L2 0 3272 3184 1636 121 18 98 chr17 25870139 25870276 -59568204 + AluJb SINE Alu 1 147 -165 1939 151 16 3 chr17 25870276 25870581 -59567899 + AluSx SINE Alu 1 309 -3 1636 121 18 98 chr17 25870581 25870781 -59567699 + AluJb SINE Alu 147 311 -1 282 289 39 39 chr17 25870802 25870958 -59567522 - L2 LINE L2 -81 3232 3077 1845 87 0 0 chr17 25871018 25871248 -59567232 + AluSg1 SINE Alu 1 230 -79 2224 102 3 3 chr17 25872193 25872498 -59565982 - AluSx SINE Alu -7 305 1 2697 215 22 47 chr17 25872505 25872613 -59565867 + MER82 DNA MER2_type 22 131 -522 2446 70 0 10 chr17 25872613 25872915 -59565565 - AluY SINE Alu -12 299 1 2697 215 22 47 chr17 25872915 25872994 -59565486 + MER82 DNA MER2_type 131 210 -443 811 161 0 0 chr17 25872994 25873118 -59565362 + FLAM_C SINE Alu 1 124 -9 2697 215 22 47 chr17 25873118 25873571 -59564909 + MER82 DNA MER2_type 210 647 -6 374 289 0 23 chr17 25873599 25873727 -59564753 - MIR SINE MIR -127 135 11 261 297 0 0 chr17 25873905 25873979 -59564501 - MIR SINE MIR -75 187 114 1972 159 10 13 chr17 25873979 25874293 -59564187 + AluSq SINE Alu 1 313 0 487 223 166 106 chr17 25874295 25874547 -59563933 - MLT1L LTR MaLR -296 319 45 2192 119 0 0 chr17 25874547 25874849 -59563631 + AluY SINE Alu 1 302 -9 487 223 166 106 chr17 25874849 25874897 -59563583 - MLT1L LTR MaLR -570 45 1 2010 161 0 3 chr17 25874899 25875204 -59563276 + AluSx SINE Alu 2 305 -7 2907 188 104 17 chr17 25875319 25875972 -59562508 - L1MC4 LINE L1 -132 7910 7201 1994 135 3 3 chr17 25875992 25876280 -59562200 - AluSx SINE Alu -22 290 3 1082 217 90 67 chr17 25876280 25876530 -59561950 - L1MC4 LINE L1 -993 7049 6787 663 195 39 0 chr17 25876530 25876658 -59561822 + FLAM_C SINE Alu 1 133 0 1082 217 90 67 chr17 25876658 25876753 -59561727 - L1MC4 LINE L1 -1255 6787 6696 1309 214 80 37 chr17 25876754 25876799 -59561681 + MLT1A1 LTR MaLR 1 43 -322 2175 121 7 3 chr17 25876799 25877097 -59561383 + AluSx SINE Alu 1 299 -13 1309 214 80 37 chr17 25877097 25877143 -59561337 + MLT1A1 LTR MaLR 43 86 -279 1540 165 13 71 chr17 25877143 25877276 -59561204 + AluJo SINE Alu 1 140 -172 1613 214 0 4 chr17 25877276 25877556 -59560924 + AluJb SINE Alu 1 279 -33 324 0 0 0 chr17 25877560 25877596 -59560884 + (TAAA)n Simple_repeat Simple_repeat 3 38 0 1540 165 13 71 chr17 25877596 25877766 -59560714 + AluJo SINE Alu 143 291 -21 1309 214 80 37 chr17 25877766 25878023 -59560457 + MLT1A1 LTR MaLR 86 365 0 225 245 0 0 chr17 25878082 25878131 -59560349 + MER5A DNA MER1_type 21 69 -120 2270 105 7 0 chr17 25878132 25878428 -59560052 + AluSx SINE Alu 1 298 -14 401 127 0 14 chr17 25878428 25878499 -59559981 + (GGGA)n Simple_repeat Simple_repeat 3 72 0 221 196 261 22 chr17 25878501 25878593 -59559887 + MER5A DNA MER1_type 70 183 -6 925 111 0 15 chr17 25878601 25878736 -59559744 + AluJ SINE Alu 1 133 -169 753 133 0 0 chr17 25878743 25878856 -59559624 + AluJ SINE Alu 200 312 0 2215 111 7 3 chr17 25878979 25879286 -59559194 + AluSx SINE Alu 1 308 -4 636 190 0 25 chr17 25879302 25879423 -59559057 + FLAM_A SINE Alu 8 125 -17 200 329 13 0 chr17 25879467 25879546 -59558934 + CT-rich Low_complexity Low_complexity 1 80 0 238 340 21 10 chr17 25879782 25879879 -59558601 + MIR SINE MIR 30 127 -135 1905 162 3 10 chr17 25880027 25880336 -59558144 + AluJo SINE Alu 1 307 -5 1930 123 56 3 chr17 25880345 25880630 -59557850 + AluSx SINE Alu 1 300 -12 244 277 128 11 chr17 25880634 25880728 -59557752 + MIR SINE MIR 157 261 -1 296 248 85 16 chr17 25880733 25880862 -59557618 + MIR SINE MIR 124 261 -1 2075 122 7 13 chr17 25880983 25881150 -59557330 - AluSx SINE Alu -10 302 136 2434 80 0 3 chr17 25881150 25881449 -59557031 - AluSc SINE Alu -11 298 1 2075 122 7 13 chr17 25881449 25881585 -59556895 - AluSx SINE Alu -176 136 1 2425 74 13 0 chr17 25881633 25881932 -59556548 + AluSp SINE Alu 1 303 -10 318 282 49 122 chr17 25882780 25883124 -59555356 + L2 LINE L2 2880 3198 -74 404 266 35 0 chr17 25883180 25883293 -59555187 + L2 LINE L2 3197 3313 0 225 0 0 0 chr17 25883386 25883411 -59555069 + (TTCA)n Simple_repeat Simple_repeat 1 25 0 2218 121 0 0 chr17 25883427 25883724 -59554756 - AluSx SINE Alu -15 297 1 2268 94 7 0 chr17 25883729 25884027 -59554453 - AluSp SINE Alu -13 300 1 1834 104 47 47 chr17 25884031 25884328 -59554152 - AluJb SINE Alu -15 297 1 410 107 0 0 chr17 25884373 25884429 -59554051 + AluJ/FLAM SINE Alu 2 57 -255 1011 191 13 65 chr17 25884582 25884812 -59553668 - MER20 DNA MER1_type -1 218 1 224 336 37 26 chr17 25884824 25885073 -59553407 - L2 LINE L2 -228 3044 2753 2032 137 0 22 chr17 25885091 25885404 -59553076 - AluSx SINE Alu -6 306 1 449 151 0 0 chr17 25885409 25885482 -59552998 - L1MB4 LINE L1 -295 5885 5813 444 179 0 66 chr17 25885546 25885808 -59552672 + (TA)n Simple_repeat Simple_repeat 1 244 0 235 230 46 11 chr17 25885810 25885897 -59552583 + L1MC4 LINE L1 6614 6703 -1339 454 217 0 32 chr17 25885905 25886062 -59552418 + (TA)n Simple_repeat Simple_repeat 1 152 0 312 204 0 92 chr17 25886072 25886170 -59552310 + L1MC4 LINE L1 6614 6702 -1340 227 234 0 53 chr17 25886207 25886301 -59552179 + L1MC4 LINE L1 6614 6702 -1340 197 128 0 26 chr17 25886305 25886344 -59552136 + (TATATG)n Simple_repeat Simple_repeat 6 43 0 323 206 0 72 chr17 25886344 25886441 -59552039 - L1MC4 LINE L1 -1339 6703 6614 2100 154 31 3 chr17 25886463 25886819 -59551661 - L1MB4 LINE L1 -390 5793 5428 2006 154 0 0 chr17 25886833 25887132 -59551348 - AluJb SINE Alu -7 305 7 1977 118 10 14 chr17 25887357 25887492 -59550988 + AluSx SINE Alu 1 135 -177 2230 123 0 7 chr17 25887492 25887802 -59550678 + AluSx SINE Alu 1 308 -4 1977 118 10 14 chr17 25887802 25887954 -59550526 + AluSx SINE Alu 135 287 -25 220 254 35 88 chr17 25888155 25888269 -59550211 + L2 LINE L2 3155 3262 -10 29 47 0 0 chr17 25888372 25888415 -59550065 + AT_rich Low_complexity Low_complexity 1 43 0 1765 162 25 35 chr17 25888430 25888744 -59549736 - AluJb SINE Alu -1 311 1 1950 159 3 0 chr17 25888775 25889064 -59549416 + AluSx SINE Alu 1 290 -22 2323 98 0 3 chr17 25889316 25889612 -59548868 + AluSx SINE Alu 1 295 -17 1952 192 31 43 chr17 25889634 25890051 -59548429 + L1M4 LINE L1 4823 5234 -912 2108 141 13 0 chr17 25890051 25890350 -59548130 - AluSx SINE Alu -9 303 1 1952 192 31 43 chr17 25890350 25890447 -59548033 + L1M4 LINE L1 5234 5331 -815 320 217 70 70 chr17 25890449 25890578 -59547902 + L1M4 LINE L1 4183 4311 -1835 807 217 0 50 chr17 25890578 25890692 -59547788 + AluJo SINE Alu 125 226 -86 2042 148 0 3 chr17 25890692 25890990 -59547490 + AluJb SINE Alu 12 308 -4 807 217 0 50 chr17 25890990 25891073 -59547407 + AluJo SINE Alu 226 312 0 1801 117 109 0 chr17 25891125 25891391 -59547089 - AluSq SINE Alu -18 295 1 2105 127 0 14 chr17 25891873 25892165 -59546315 - AluSx SINE Alu -24 288 1 1286 221 66 15 chr17 25892177 25892571 -59545909 + L1M4 LINE L1 4421 4834 -1312 247 288 14 0 chr17 25892584 25892657 -59545823 + G-rich Low_complexity Low_complexity 6 79 0 335 351 35 0 chr17 25892865 25892979 -59545501 - L2 LINE L2 -2 3270 3153 2156 122 7 3 chr17 25892980 25893276 -59545204 + AluSx SINE Alu 1 297 -15 1435 157 50 75 chr17 25893302 25893620 -59544860 - AluJo SINE Alu -2 310 1 205 368 45 65 chr17 25893621 25893855 -59544625 - L2 LINE L2 -1900 1414 1190 2545 66 0 0 chr17 25893855 25894156 -59544324 - AluY SINE Alu -10 301 1 205 368 45 65 chr17 25894156 25894318 -59544162 - L2 LINE L2 -2124 1190 1026 3348 161 12 16 chr17 25894869 25895041 -59543439 - MER41D LTR ERV1 0 557 386 2310 82 7 0 chr17 25895041 25895346 -59543134 - AluSp SINE Alu 0 307 1 3348 161 12 16 chr17 25895346 25895731 -59542749 - MER41D LTR ERV1 -171 386 1 955 184 0 0 chr17 25895856 25896008 -59542472 + AluJb SINE Alu 137 288 -24 2446 72 3 7 chr17 25896587 25896891 -59541589 + AluSp SINE Alu 1 303 -10 26 30 0 0 chr17 25898171 25898204 -59540276 + GC_rich Low_complexity Low_complexity 1 33 0 2302 89 3 19 chr17 25898357 25898673 -59539807 - AluY SINE Alu 0 311 1 2032 99 33 4 chr17 25899185 25899457 -59539023 + AluSq SINE Alu 1 280 -33 497 275 48 112 chr17 25899948 25900238 -59538242 - MLT1K LTR MaLR -254 334 70 1951 142 32 0 chr17 25900238 25900520 -59537960 - AluJb SINE Alu -21 291 1 497 275 48 112 chr17 25900520 25900585 -59537895 - MLT1K LTR MaLR -518 70 2 275 351 90 0 chr17 25901182 25901293 -59537187 - L2 LINE L2 -12 3260 3140 450 247 108 36 chr17 25901313 25901507 -59536973 - MLT1K LTR MaLR -7 581 374 897 80 0 0 chr17 25901575 25901688 -59536792 + AluSg/x SINE Alu 188 300 -9 1808 112 4 16 chr17 25901692 25901941 -59536539 + AluSg SINE Alu 1 246 -64 697 79 0 0 chr17 25902041 25902130 -59536350 - AluS SINE Alu -222 90 2 477 242 86 0 chr17 25902131 25902259 -59536221 + MIR SINE MIR 121 259 -3 521 103 0 0 chr17 25902295 25902363 -59536117 + U4 snRNA snRNA 1 68 -77 1573 186 8 0 chr17 25902368 25902626 -59535854 + AluSx SINE Alu 1 260 -52 281 264 55 22 chr17 25902654 25902745 -59535735 - MLT1K LTR MaLR -290 298 205 713 74 0 0 chr17 25902831 25902926 -59535554 - AluS SINE Alu -216 96 2 2536 35 3 19 chr17 25903038 25903349 -59535131 - AluY SINE Alu -5 306 1 35 41 0 0 chr17 25904262 25904311 -59534169 + GC_rich Low_complexity Low_complexity 1 49 0 24 32 0 0 chr17 25904372 25904403 -59534077 + GC_rich Low_complexity Low_complexity 1 31 0 2002 110 4 4 chr17 25904557 25904830 -59533650 + AluSx SINE Alu 1 273 -39 659 242 59 32 chr17 25905136 25905355 -59533125 + MIR SINE MIR 2 226 -36 339 247 107 27 chr17 25905390 25905540 -59532940 - MIR SINE MIR -1 261 100 481 216 64 24 chr17 25905789 25905914 -59532566 + MIR3 SINE MIR 58 187 -21 235 238 24 119 chr17 25907596 25907644 -59530836 + L2 LINE L2 3200 3251 -62 2328 91 0 7 chr17 25907644 25907942 -59530538 - AluY SINE Alu -15 296 1 235 238 24 119 chr17 25907942 25908019 -59530461 + L2 LINE L2 3251 3313 0 235 261 22 43 chr17 25908454 25908546 -59529934 - MIR SINE MIR -27 235 146 2418 60 7 27 chr17 25908607 25908908 -59529572 - AluY SINE Alu -16 295 1 2198 102 17 3 chr17 25908920 25909215 -59529265 - AluSg SINE Alu -11 299 1 2485 62 0 26 chr17 25909223 25909529 -59528951 - AluY SINE Alu -13 298 1 467 263 105 11 chr17 25909810 25910000 -59528480 - MIR SINE MIR -1 261 54 3159 183 39 33 chr17 25910024 25910584 -59527896 - L1MB7 LINE L1 -11 6173 5607 2331 92 0 0 chr17 25910584 25910878 -59527602 - AluY SINE Alu -17 294 1 3159 183 39 33 chr17 25910878 25910985 -59527495 - L1MB7 LINE L1 -577 5607 5502 2115 95 4 0 chr17 25911088 25911362 -59527118 - AluSx SINE Alu -37 275 1 349 250 56 19 chr17 25911405 25911513 -59526967 - MER5B DNA MER1_type -63 115 4 1473 201 25 74 chr17 25911527 25911852 -59526628 + MLT1A2 LTR MaLR 2 306 -68 2330 108 0 0 chr17 25911852 25912157 -59526323 - AluSx SINE Alu -7 305 1 1473 201 25 74 chr17 25912157 25912223 -59526257 + MLT1A2 LTR MaLR 306 374 0 2281 98 0 13 chr17 25912241 25912558 -59525922 - AluSq SINE Alu 0 313 1 1166 85 251 20 chr17 25912559 25912758 -59525722 - AluSg1 SINE Alu -9 300 56 214 241 0 19 chr17 25912845 25912899 -59525581 + MIR SINE MIR 199 251 -11 204 125 0 0 chr17 25913501 25913533 -59524947 + (T)n Simple_repeat Simple_repeat 1 32 0 1719 183 7 3 chr17 25913554 25913854 -59524626 - AluJo SINE Alu -9 303 3 2270 78 0 7 chr17 25914211 25914515 -59523965 - AluSc SINE Alu 0 302 1 1499 165 162 17 chr17 25914790 25915136 -59523344 - MSTD LTR MaLR 0 396 1 2281 103 3 0 chr17 25915172 25915464 -59523016 - AluSg SINE Alu -17 293 1 1250 83 13 0 chr17 25915717 25915874 -59522606 - AluSg/x SINE Alu -16 294 136 2047 84 0 111 chr17 25915977 25916309 -59522171 - AluSx SINE Alu -15 297 3 1620 167 56 0 chr17 25916316 25916603 -59521877 - AluJb SINE Alu -9 303 1 1876 102 3 46 chr17 25916606 25916782 -59521698 - AluSq SINE Alu -3 310 128 2227 114 0 0 chr17 25916782 25917079 -59521401 - AluSg SINE Alu -13 297 1 2419 97 0 0 chr17 25917081 25917390 -59521090 - AluY SINE Alu -2 309 1 1876 102 3 46 chr17 25917390 25917494 -59520986 - AluSq SINE Alu -186 127 39 586 151 226 0 chr17 25917580 25917708 -59520772 + FRAM SINE Alu 24 175 0 432 221 165 136 chr17 25917957 25918333 -59520147 + MLT1K LTR MaLR 202 588 0 2299 107 10 0 chr17 25918368 25918667 -59519813 - AluSx SINE Alu -10 302 1 198 0 0 0 chr17 25918802 25918824 -59519656 + (A)n Simple_repeat Simple_repeat 1 22 0 2273 81 0 30 chr17 25919359 25919692 -59518788 - AluY SINE Alu 0 311 1 1153 148 0 6 chr17 25919829 25920011 -59518469 - MLT1F1 LTR MaLR -386 181 1 2251 121 0 10 chr17 25920083 25920397 -59518083 - AluSx SINE Alu -1 311 1 2216 119 0 7 chr17 25920473 25920775 -59517705 - AluSx SINE Alu -10 302 3 284 301 75 34 chr17 25920788 25920934 -59517546 + L2 LINE L2 2359 2510 -804 1640 159 84 22 chr17 25920951 25921271 -59517209 + MER2 DNA MER2_type 6 345 0 284 245 102 0 chr17 25921305 25921403 -59517077 + L2 LINE L2 2581 2688 -626 1115 180 0 0 chr17 25921405 25921583 -59516897 - FRAM SINE Alu -5 171 1 425 97 16 0 chr17 25921689 25921751 -59516729 - AluSq SINE Alu -117 196 134 2320 86 0 42 chr17 25921751 25921920 -59516560 - AluSq SINE Alu -13 300 126 351 0 0 0 chr17 25921920 25921959 -59516521 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 2157 84 0 31 chr17 25921959 25922246 -59516234 - AluSg SINE Alu -28 282 5 2320 86 0 42 chr17 25922246 25922388 -59516092 - AluSq SINE Alu -185 128 1 230 308 34 17 chr17 25922404 25922521 -59515959 + L2 LINE L2 2993 3111 -161 222 259 0 0 chr17 25922543 25922597 -59515883 + L2 LINE L2 3214 3267 -5 24 32 0 0 chr17 25922891 25922922 -59515558 + AT_rich Low_complexity Low_complexity 1 31 0 746 137 0 8 chr17 25922924 25923041 -59515439 - FLAM_C SINE Alu -17 116 1 2196 107 0 0 chr17 25923054 25923367 -59515113 - AluSg SINE Alu 0 313 1 189 0 0 0 chr17 25923367 25923388 -59515092 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 2146 120 0 0 chr17 25923388 25923672 -59514808 - AluSq SINE Alu -29 284 1 2229 121 0 13 chr17 25923718 25924032 -59514448 - AluSx SINE Alu -2 310 1 713 224 109 5 chr17 25924649 25924850 -59513630 - MIR SINE MIR -36 226 5 2570 55 0 6 chr17 25926638 25926950 -59511530 + AluY SINE Alu 1 310 -1 1891 134 4 4 chr17 25927070 25927339 -59511141 + AluSx SINE Alu 10 278 -34 2489 53 0 31 chr17 25927366 25927687 -59510793 + AluY SINE Alu 1 311 0 333 291 140 22 chr17 25927693 25927872 -59510608 + MIR SINE MIR 57 256 -6 1838 107 3 128 chr17 25928173 25928518 -59509962 + AluSx SINE Alu 1 302 0 1755 84 13 8 chr17 25929381 25929619 -59508861 + AluSc SINE Alu 58 296 -13 2163 112 26 7 chr17 25929629 25929934 -59508546 + AluSq SINE Alu 1 311 -2 385 203 28 63 chr17 25929935 25930078 -59508402 + L1MC5 LINE L1 7649 7786 -175 1626 127 24 106 chr17 25930082 25930413 -59508067 + AluYb8 SINE Alu 6 309 -9 1737 174 3 16 chr17 25930433 25930738 -59507742 + AluJo SINE Alu 5 305 -7 307 219 32 71 chr17 25930739 25930894 -59507586 + L1MC5 LINE L1 7779 7927 -34 313 314 36 18 chr17 25931037 25931257 -59507223 - L2 LINE L2 -1250 2064 1841 379 226 12 0 chr17 25931506 25931590 -59506890 - AluY SINE Alu -1 300 216 634 204 0 0 chr17 25931619 25931732 -59506748 + AluJo/FLAM SINE Alu 6 118 -194 1933 139 7 7 chr17 25931732 25932033 -59506447 - AluSx SINE Alu -11 301 1 309 65 0 0 chr17 25932037 25932083 -59506397 - Alu SINE Alu 0 302 257 1149 30 8 0 chr17 25932362 25932493 -59505987 + AluY SINE Alu 1 132 -179 2189 85 0 51 chr17 25932605 25932921 -59505559 + AluSx SINE Alu 1 300 -12 2503 58 0 0 chr17 25932926 25933218 -59505262 + AluY SINE Alu 1 292 -19 1412 140 92 4 chr17 25934505 25934755 -59503725 + AluSx SINE Alu 38 309 -3 449 170 19 57 chr17 25934755 25934861 -59503619 + L1MD3 LINE L1 7894 7995 0 203 318 116 53 chr17 25935048 25935115 -59503365 - MIR SINE MIR -6 256 195 1649 143 42 31 chr17 25935115 25935402 -59503078 + AluJb SINE Alu 5 294 -18 203 318 116 53 chr17 25935402 25935523 -59502957 - MIR SINE MIR -67 195 56 2313 112 3 0 chr17 25936094 25936399 -59502081 - AluSx SINE Alu -6 306 1 183 80 0 0 chr17 25936491 25936516 -59501964 + (T)n Simple_repeat Simple_repeat 1 25 0 1489 124 0 10 chr17 25936522 25936731 -59501749 - AluSx SINE Alu -105 207 1 472 186 98 0 chr17 25937020 25937122 -59501358 + MER3 DNA MER1_type 94 205 -4 382 285 51 44 chr17 25937347 25937484 -59500996 - MER91A DNA MER1_type -19 177 40 2544 39 0 0 chr17 25937864 25938179 -59500301 + AluY SINE Alu 1 315 0 1302 57 38 0 chr17 25938468 25938626 -59499854 + AluY SINE Alu 127 290 -21 1551 173 28 18 chr17 25938642 25938926 -59499554 + AluJb SINE Alu 7 293 -19 923 251 156 3 chr17 25938945 25939292 -59499188 + L1MB5 LINE L1 3469 3868 -2278 1956 151 0 3 chr17 25939310 25939609 -59498871 + AluSg SINE Alu 1 298 -12 957 203 100 63 chr17 25939611 25939657 -59498823 + L1MB5 LINE L1 4018 4061 -2085 2240 87 13 7 chr17 25939657 25939955 -59498525 + AluSp SINE Alu 1 300 -13 957 203 100 63 chr17 25939955 25940208 -59498272 + L1MB5 LINE L1 4061 4328 -1818 1691 152 42 3 chr17 25940212 25940495 -59497985 + AluJb SINE Alu 6 299 -13 1037 176 6 0 chr17 25940495 25940665 -59497815 + AluJb SINE Alu 134 304 -8 1259 206 49 80 chr17 25940665 25940747 -59497733 + L1MB5 LINE L1 4322 4405 -1741 1733 173 7 17 chr17 25940747 25941048 -59497432 + AluJo SINE Alu 1 298 -14 2266 82 24 0 chr17 25941052 25941344 -59497136 + AluSp SINE Alu 2 300 -13 1259 206 49 80 chr17 25941344 25941690 -59496790 + L1MB5 LINE L1 4408 4743 -1403 1102 215 73 36 chr17 25941690 25942020 -59496460 - MER2 DNA MER2_type -1 343 2 1259 206 49 80 chr17 25942020 25942036 -59496444 + L1MB5 LINE L1 4743 4758 -1388 1744 160 3 70 chr17 25942036 25942348 -59496132 + AluJo SINE Alu 1 291 -21 1912 159 13 0 chr17 25942354 25942655 -59495825 + AluJb SINE Alu 1 305 -7 324 225 0 0 chr17 25942656 25942727 -59495753 + L1MB5 LINE L1 5124 5194 -952 337 197 47 31 chr17 25943091 25943218 -59495262 + L1MB5 LINE L1 5197 5325 -821 2078 123 3 7 chr17 25943226 25943535 -59494945 + AluSx SINE Alu 1 308 -4 195 276 69 0 chr17 25943557 25943615 -59494865 - L2 LINE L2 -4 3309 3248 35 41 0 0 chr17 25943966 25944015 -59494465 + AT_rich Low_complexity Low_complexity 1 49 0 22 0 0 0 chr17 25944215 25944237 -59494243 + AT_rich Low_complexity Low_complexity 1 22 0 2190 106 0 3 chr17 25944264 25944556 -59493924 - AluSx SINE Alu -17 295 5 3649 151 28 112 chr17 25944889 25945272 -59493208 + L1MB5 LINE L1 5343 5757 -417 1909 116 7 25 chr17 25945272 25945556 -59492924 + AluSx SINE Alu 1 279 -33 3649 151 28 112 chr17 25945556 25945682 -59492798 + L1MB5 LINE L1 5757 5892 -282 2252 116 0 7 chr17 25945682 25945985 -59492495 + AluSx SINE Alu 1 301 -11 2225 108 0 3 chr17 25945991 25946277 -59492203 + AluSx SINE Alu 1 285 -27 3649 151 28 112 chr17 25946277 25946358 -59492122 + L1MB5 LINE L1 5897 5983 -191 2444 76 7 3 chr17 25946358 25946662 -59491818 + AluY SINE Alu 1 305 -6 3649 151 28 112 chr17 25946662 25946921 -59491559 + L1MB5 LINE L1 5983 6124 -50 1990 161 3 0 chr17 25946921 25947226 -59491254 - AluJb SINE Alu -6 306 1 3649 151 28 112 chr17 25947226 25947267 -59491213 + L1MB5 LINE L1 6124 6167 -7 202 224 0 134 chr17 25947414 25947481 -59490999 + MIR SINE MIR 87 144 -64 2237 128 0 0 chr17 25948198 25948503 -59489977 + AluSx SINE Alu 1 305 -7 312 27 0 0 chr17 25948514 25948551 -59489929 + (GGAA)n Simple_repeat Simple_repeat 4 40 0 375 225 203 5 chr17 25948615 25948802 -59489678 + L1ME3 LINE L1 5938 6161 -1 1974 159 0 3 chr17 25948848 25949150 -59489330 + AluSx SINE Alu 1 301 -11 2868 9 0 13 chr17 25949150 25949465 -59489015 + AluYa5 SINE Alu 1 311 0 2362 76 9 22 chr17 25949606 25949921 -59488559 + AluSx SINE Alu 1 311 -1 2232 113 0 7 chr17 25949988 25950290 -59488190 + AluSq SINE Alu 1 300 -13 491 177 89 0 chr17 25950290 25950414 -59488066 - MIR SINE MIR -48 214 80 2475 77 3 0 chr17 25950908 25951206 -59487274 + AluY SINE Alu 1 299 -12 1196 106 19 0 chr17 25951207 25951367 -59487113 + AluSq SINE Alu 132 294 -19 1386 189 12 12 chr17 25951548 25951802 -59486678 - AluJo SINE Alu -9 303 50 277 30 0 0 chr17 25951802 25951835 -59486645 + MER51A-int LTR ERV1 7116 7148 -389 605 199 61 0 chr17 25951835 25951966 -59486514 + LTR54B LTR ERV1 3 141 -357 2045 158 48 0 chr17 25951966 25952296 -59486184 + MER51A-int LTR ERV1 7470 7815 -1 3490 129 65 66 chr17 25952298 25952933 -59485547 + MER51A LTR ERV1 1 634 0 956 146 61 0 chr17 25953272 25953436 -59485044 + L1MD3 LINE L1 7729 7902 -93 271 98 24 0 chr17 25953437 25953478 -59485002 + Alu SINE Alu 1 42 -257 1405 104 0 0 chr17 25953578 25953760 -59484720 - AluSq SINE Alu -131 182 1 1642 197 3 7 chr17 25953844 25954138 -59484342 + AluJo SINE Alu 5 297 -15 2346 86 0 0 chr17 25954259 25954560 -59483920 + AluY SINE Alu 3 303 -8 1748 140 7 7 chr17 25954615 25954887 -59483593 + AluJb SINE Alu 30 301 -11 269 229 109 115 chr17 25954932 25955039 -59483441 - MIR SINE MIR -2 260 154 2317 95 0 19 chr17 25955039 25955354 -59483126 + AluSq SINE Alu 4 312 -1 269 229 109 115 chr17 25955354 25955366 -59483114 - MIR SINE MIR -108 154 143 2234 97 10 3 chr17 25955366 25955666 -59482814 + AluSp SINE Alu 1 302 -11 269 229 109 115 chr17 25955666 25955703 -59482777 - MIR SINE MIR -119 143 107 1225 195 79 14 chr17 25955703 25955980 -59482500 + AluJo SINE Alu 1 295 -17 269 229 109 115 chr17 25955980 25956013 -59482467 - MIR SINE MIR -155 107 70 198 103 0 0 chr17 25956017 25956046 -59482434 + (TA)n Simple_repeat Simple_repeat 2 30 0 234 283 0 22 chr17 25956047 25956139 -59482341 - L1MC4 LINE L1 -1339 6703 6614 * 246 244 47 23 chr17 25956073 25956159 -59482321 + L1MC4 LINE L1 6616 6703 -1339 248 196 54 0 chr17 25956159 25956215 -59482265 + (CATG)n Simple_repeat Simple_repeat 2 60 0 273 119 0 0 chr17 25956216 25956258 -59482222 + (TA)n Simple_repeat Simple_repeat 2 43 0 2155 100 0 4 chr17 25956271 25956550 -59481930 - AluSg SINE Alu -32 278 1 2328 97 0 10 chr17 25956551 25956859 -59481621 - AluSx SINE Alu -7 305 1 2115 115 27 3 chr17 25956860 25957156 -59481324 - AluSx SINE Alu -9 303 1 1828 159 0 44 chr17 25957904 25958225 -59480255 + AluJb SINE Alu 1 307 -5 1885 146 3 7 chr17 25958316 25958618 -59479862 - AluSx SINE Alu -5 307 7 1588 179 21 17 chr17 25958622 25958912 -59479568 - AluJo SINE Alu -21 291 1 856 129 0 0 chr17 25958936 25959060 -59479420 - FLAM_C SINE Alu -19 124 1 1597 204 17 0 chr17 25959442 25959731 -59478749 - AluJo SINE Alu -18 294 1 1614 157 7 60 chr17 25959779 25960102 -59478378 + AluJb SINE Alu 1 307 0 940 208 0 0 chr17 25960372 25960545 -59477935 + AluJb SINE Alu 137 309 -3 1726 147 44 3 chr17 25961055 25961348 -59477132 - AluSg SINE Alu -5 305 1 972 119 0 8 chr17 25961353 25961487 -59476993 - AluSq/x SINE Alu -179 133 1 21 57 0 0 chr17 25961582 25961617 -59476863 + AT_rich Low_complexity Low_complexity 1 35 0 1555 187 10 17 chr17 25961639 25961928 -59476552 + AluJb SINE Alu 3 289 -23 1620 151 53 33 chr17 25962295 25962594 -59475886 + AluJb SINE Alu 4 308 -4 1563 136 136 98 chr17 25962595 25962993 -59475487 + MSTA LTR MaLR 1 413 -15 1914 149 3 19 chr17 25963028 25963337 -59475143 + AluJo SINE Alu 2 305 -7 490 258 133 0 chr17 25963342 25963493 -59474987 + MER112 DNA MER1_type 90 260 0 2291 96 13 3 chr17 25963826 25964129 -59474351 - AluSq SINE Alu -5 308 3 1103 81 0 7 chr17 25964229 25964365 -59474115 - AluSq/x SINE Alu -177 135 1 1529 169 70 18 chr17 25964368 25964641 -59473839 - AluJo SINE Alu -16 296 10 2175 96 24 0 chr17 25964742 25965034 -59473446 + AluSg SINE Alu 1 299 -11 1965 147 58 12 chr17 25965080 25965406 -59473074 - MER61A LTR ERV1 -2 341 1 17895 99 21 24 chr17 25965435 25967439 -59471041 - MER61A-int LTR ERV1 -45 5172 3133 2267 93 7 3 chr17 25967439 25967741 -59470739 + AluSq SINE Alu 1 303 -10 17895 99 21 24 chr17 25967741 25968647 -59469833 - MER61A-int LTR ERV1 -2084 3133 2226 1987 128 0 0 chr17 25968647 25968952 -59469528 - AluSg SINE Alu 0 305 1 1045 96 7 0 chr17 25968952 25969087 -59469393 - AluSq/x SINE Alu -177 136 1 2223 106 3 3 chr17 25969319 25969622 -59468858 - AluSg SINE Alu -7 303 1 2225 95 0 0 chr17 25969837 25970122 -59468358 + AluSx SINE Alu 9 293 -19 1243 179 33 5 chr17 25970401 25970613 -59467867 - MER20 DNA MER1_type 0 219 2 1554 165 0 118 chr17 25970860 25971200 -59467280 - AluJb SINE Alu -2 300 1 545 206 22 44 chr17 25971208 25971344 -59467136 - L1ME3 LINE L1 0 6162 6030 1266 204 119 15 chr17 25971350 25971619 -59466861 - AluJo SINE Alu -15 297 1 2026 142 0 3 chr17 25971773 25972075 -59466405 - AluJb SINE Alu -7 305 5 902 160 53 43 chr17 25972199 25972387 -59466093 - AluJo SINE Alu -10 302 113 740 139 0 0 chr17 25972447 25972548 -59465932 - AluJ/FLAM SINE Alu -210 102 2 1733 154 34 10 chr17 25972555 25972848 -59465632 - AluSx SINE Alu -12 300 1 1360 215 53 59 chr17 25972855 25973036 -59465444 - L1ME1 LINE L1 0 6184 6003 2164 129 3 3 chr17 25973036 25973345 -59465135 - AluSx SINE Alu -3 309 1 1360 215 53 59 chr17 25973345 25973641 -59464839 - L1ME1 LINE L1 -181 6003 5707 234 0 0 0 chr17 25973641 25973667 -59464813 + (TA)n Simple_repeat Simple_repeat 2 27 0 2456 77 3 0 chr17 25973667 25973965 -59464515 - AluY SINE Alu -12 299 1 1360 215 53 59 chr17 25973965 25973988 -59464492 - L1ME1 LINE L1 -475 5709 5652 533 177 89 0 chr17 25974459 25974583 -59463897 + MIR SINE MIR 80 214 -48 2213 113 0 7 chr17 25974583 25974885 -59463595 - AluSq SINE Alu -13 300 1 2343 76 9 22 chr17 25974952 25975267 -59463213 - AluSx SINE Alu -1 311 1 2839 9 0 13 chr17 25975408 25975723 -59462757 - AluYa5 SINE Alu 0 311 1 1956 159 0 3 chr17 25975723 25976025 -59462455 - AluSx SINE Alu -11 301 1 387 225 203 5 chr17 25976071 25976258 -59462222 - L1ME3 LINE L1 -1 6161 5938 312 27 0 0 chr17 25976322 25976359 -59462121 + (TTCC)n Simple_repeat Simple_repeat 4 40 0 2214 128 0 0 chr17 25976370 25976675 -59461805 - AluSx SINE Alu -7 305 1 221 224 0 134 chr17 25977392 25977459 -59461021 - MIR SINE MIR -64 144 87 313 49 0 0 chr17 25977606 25977647 -59460833 - L1MB5 LINE L1 -7 6167 6127 1972 161 3 0 chr17 25977647 25977952 -59460528 + AluJb SINE Alu 1 306 -6 4948 126 48 15 chr17 25978066 25978370 -59460110 - Tigger1 DNA MER2_type -634 1784 1491 2259 101 3 3 chr17 25978370 25978666 -59459814 - AluSx SINE Alu -16 296 1 2390 83 0 6 chr17 25978675 25978989 -59459491 - AluSp SINE Alu -1 312 1 4948 126 48 15 chr17 25978989 25979468 -59459012 - Tigger1 DNA MER2_type -934 1484 965 478 131 0 0 chr17 25979469 25979530 -59458950 + AluS SINE Alu 3 63 -255 1830 216 111 43 chr17 25979818 25979830 -59458650 - L1 LINE L1 -2171 3975 3965 2223 107 7 0 chr17 25979830 25980130 -59458350 - AluSx SINE Alu -10 302 1 1830 216 111 43 chr17 25980130 25980485 -59457995 - L1 LINE L1 -2181 3965 3636 713 189 16 8 chr17 25980485 25980607 -59457873 + FLAM_A SINE Alu 1 123 -10 1830 216 111 43 chr17 25980607 25980868 -59457612 - L1 LINE L1 -2510 3636 3303 1561 80 10 0 chr17 25980875 25981075 -59457405 + AluSc SINE Alu 1 202 -107 1896 133 6 50 chr17 25981178 25981501 -59456979 + AluSg SINE Alu 1 309 -1 2196 124 13 0 chr17 25981509 25981807 -59456673 + AluSx SINE Alu 1 302 -10 1258 182 101 14 chr17 25982037 25982160 -59456320 - L1MB8 LINE L1 -5 6173 6062 2343 85 0 29 chr17 25982160 25982476 -59456004 - AluY SINE Alu -4 307 1 1258 182 101 14 chr17 25982476 25982649 -59455831 - L1MB8 LINE L1 -116 6062 5851 1908 178 76 29 chr17 25982655 25983044 -59455436 - L1MB8 LINE L1 -743 5403 4989 2283 101 0 3 chr17 25983044 25983342 -59455138 - AluSx SINE Alu -15 297 1 1908 178 76 29 chr17 25983342 25983397 -59455083 - L1MB8 LINE L1 -1157 4989 4938 233 248 134 9 chr17 25983381 25983552 -59454928 + L1MEc LINE L1 2147 2302 -4238 * 281 229 16 0 chr17 25985086 25985147 -59453333 - MER58 DNA MER1_type 0 2420 2359 283 349 0 0 chr17 25985183 25985266 -59453214 - MER58 DNA MER1_type -300 86 4 643 257 81 65 chr17 25985286 25985609 -59452871 - L1MC4 LINE L1 -90 7952 7625 262 361 78 43 chr17 25985855 25986226 -59452254 + L2 LINE L2 2508 2891 -423 2239 107 0 0 chr17 25986256 25986546 -59451934 + AluSg SINE Alu 1 290 -20 2197 114 8 36 chr17 25986810 25987169 -59451311 + L1MA3 LINE L1 5477 5825 -480 1538 105 44 22 chr17 25987169 25987397 -59451083 + AluSq SINE Alu 1 233 -80 1037 126 5 126 chr17 25987681 25987726 -59450754 + AluSg/x SINE Alu 92 141 -171 2009 123 0 75 chr17 25987726 25988060 -59450420 + AluSx SINE Alu 1 309 -3 1037 126 5 126 chr17 25988060 25988220 -59450260 + AluSg/x SINE Alu 141 272 -40 234 0 0 0 chr17 25988526 25988552 -59449928 + (T)n Simple_repeat Simple_repeat 1 26 0 292 252 77 68 chr17 25988737 25988846 -59449634 - L1M4 LINE L1 -2229 3917 3810 1991 133 25 0 chr17 25988846 25989132 -59449348 - AluSx SINE Alu -19 293 1 292 252 77 68 chr17 25989132 25989347 -59449133 - L1M4 LINE L1 -2336 3810 3590 2494 54 3 0 chr17 25989966 25990260 -59448220 - AluY SINE Alu -16 295 1 328 275 7 80 chr17 25990348 25990486 -59447994 - L1ME3A LINE L1 -38 6132 6005 245 27 54 0 chr17 25990492 25990529 -59447951 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 2024 134 0 11 chr17 25990531 25990815 -59447665 - AluSx SINE Alu -31 281 1 2153 116 3 3 chr17 25990824 25991125 -59447355 - AluSx SINE Alu -11 301 1 2155 122 0 3 chr17 25991242 25991537 -59446943 - AluSx SINE Alu -18 294 1 792 129 0 9 chr17 25991789 25991905 -59446575 + FLAM_C SINE Alu 2 116 -17 22 0 0 0 chr17 25991923 25991945 -59446535 + AT_rich Low_complexity Low_complexity 1 22 0 2134 143 88 13 chr17 25991997 25992395 -59446085 - L1MB3 LINE L1 -2 6181 5754 237 299 52 31 chr17 25992783 25992880 -59445600 - MER5A DNA MER1_type -51 138 40 250 135 19 0 chr17 25993182 25993234 -59445246 + L1MB7 LINE L1 6132 6184 0 731 171 8 0 chr17 25993412 25993529 -59444951 - Tigger1 DNA MER2_type -1 2417 2300 801 105 60 60 chr17 25993530 25993663 -59444817 + AluSq/x SINE Alu 2 134 -178 5670 143 11 26 chr17 25993687 25994571 -59443909 + Tigger1 DNA MER2_type 1 872 -1546 2048 125 3 28 chr17 25994571 25994890 -59443590 + AluSx SINE Alu 1 311 -1 5670 143 11 26 chr17 25994890 25994919 -59443561 + Tigger1 DNA MER2_type 872 900 -1518 4895 206 34 63 chr17 25995019 25995862 -59442618 + L1MB4 LINE L1 3562 4428 -1718 2109 121 28 0 chr17 25995862 25996152 -59442328 + AluSx SINE Alu 1 298 -14 1693 109 0 0 chr17 25996153 25996383 -59442097 + AluY SINE Alu 82 311 0 4895 206 34 63 chr17 25996383 25996956 -59441524 + L1MB4 LINE L1 4428 4938 -1208 1730 162 0 35 chr17 25996956 25997271 -59441209 + AluJo SINE Alu 1 304 -8 4895 206 34 63 chr17 25997271 25997324 -59441156 + L1MB4 LINE L1 4938 4991 -1155 1135 111 0 7 chr17 25997324 25997506 -59440974 + AluSg/x SINE Alu 128 308 0 1076 154 0 6 chr17 25997522 25997684 -59440796 + AluSx SINE Alu 1 161 -151 2041 43 0 0 chr17 25997684 25997914 -59440566 + AluY SINE Alu 71 300 -11 533 163 0 0 chr17 25997916 25998008 -59440472 + L1MB5 LINE L1 5883 5974 -200 * 2454 185 40 12 chr17 25998003 25998521 -59439959 + L1MB4 LINE L1 5555 6087 -93 1848 171 3 0 chr17 25998797 25999139 -59439341 - AluJb SINE Alu 0 312 1 1670 183 0 14 chr17 26000257 26000563 -59437917 + AluJo SINE Alu 1 302 0 200 239 315 0 chr17 26000588 26000680 -59437800 + MIR SINE MIR 22 142 -120 1341 233 13 19 chr17 26000686 26000999 -59437481 + AluJo SINE Alu 1 311 -1 228 135 0 0 chr17 26001007 26001044 -59437436 + (GGAAA)n Simple_repeat Simple_repeat 3 39 0 334 240 50 20 chr17 26001054 26001154 -59437326 + MIR SINE MIR 157 259 -3 2311 110 0 0 chr17 26001214 26001514 -59436966 - AluSx SINE Alu -12 300 1 214 242 232 42 chr17 26001761 26001856 -59436624 + MIR3 SINE MIR 48 160 -48 182 384 51 36 chr17 26002016 26002154 -59436326 + L2 LINE L2 2970 3109 -163 207 0 0 0 chr17 26003094 26003117 -59435363 + (A)n Simple_repeat Simple_repeat 1 23 0 2142 110 3 0 chr17 26003117 26003433 -59435047 + AluSx SINE Alu 1 317 0 1811 158 7 28 chr17 26003434 26003725 -59434755 + AluSx SINE Alu 1 285 -27 1048 177 0 6 chr17 26003858 26004033 -59434447 + FAM SINE Alu 1 174 -1 2042 149 0 3 chr17 26004033 26004335 -59434145 + AluSq SINE Alu 1 301 -12 490 183 21 21 chr17 26004335 26004428 -59434052 - MER7A DNA MER2_type -255 91 1 343 267 0 9 chr17 26004429 26004534 -59433946 + L1M4 LINE L1 2854 2957 -3189 1599 90 0 0 chr17 26004534 26004735 -59433745 + AluY SINE Alu 3 203 -108 2096 221 74 67 chr17 26004735 26005672 -59432808 + L1M4 LINE L1 3081 4010 -2136 718 81 61 0 chr17 26005672 26005771 -59432709 + U6 snRNA snRNA 1 105 -2 1360 78 6 0 chr17 26005771 26005950 -59432530 + L1MA1 LINE L1 6123 6302 0 2096 221 74 67 chr17 26005950 26006491 -59431989 + L1M4 LINE L1 4009 4730 -1416 2167 106 10 0 chr17 26006947 26007239 -59431241 - AluSx SINE Alu -17 295 1 1026 99 0 0 chr17 26008167 26008298 -59430182 - AluSq/x SINE Alu -181 131 1 306 105 0 10 chr17 26008309 26008358 -59430122 - L1M4 LINE L1 -351 5815 5773 232 178 0 0 chr17 26008669 26008714 -59429766 + A-rich Low_complexity Low_complexity 1 45 0 1648 170 31 50 chr17 26008716 26009034 -59429446 + AluJb SINE Alu 1 312 0 243 0 0 0 chr17 26009382 26009409 -59429071 + (T)n Simple_repeat Simple_repeat 1 27 0 247 255 77 68 chr17 26009593 26009702 -59428778 - L1M4 LINE L1 -2229 3917 3810 2009 133 25 0 chr17 26009702 26009988 -59428492 - AluSx SINE Alu -19 293 1 247 255 77 68 chr17 26009988 26010203 -59428277 - L1M4 LINE L1 -2336 3810 3590 2522 54 3 0 chr17 26010822 26011116 -59427364 - AluY SINE Alu -16 295 1 322 275 7 80 chr17 26011204 26011342 -59427138 - L1ME3A LINE L1 -38 6132 6005 245 27 54 0 chr17 26011348 26011385 -59427095 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 2071 130 0 11 chr17 26011387 26011671 -59426809 - AluSx SINE Alu -31 281 1 2287 102 3 10 chr17 26011682 26011996 -59426484 - AluSx SINE Alu 0 312 1 2175 122 0 3 chr17 26012113 26012408 -59426072 - AluSx SINE Alu -18 294 1 740 129 0 9 chr17 26012660 26012776 -59425704 + FLAM_C SINE Alu 2 116 -17 22 0 0 0 chr17 26012794 26012816 -59425664 + AT_rich Low_complexity Low_complexity 1 22 0 2044 143 82 12 chr17 26012868 26013268 -59425212 - L1MB3 LINE L1 -2 6181 5754 206 299 52 31 chr17 26013656 26013753 -59424727 - MER5A DNA MER1_type -51 138 40 242 135 19 0 chr17 26014055 26014107 -59424373 + L1MB7 LINE L1 6132 6184 0 725 171 8 0 chr17 26014284 26014401 -59424079 - Tigger1 DNA MER2_type -1 2417 2300 1639 108 0 14 chr17 26014401 26014624 -59423856 + AluSq SINE Alu 1 220 -93 615 177 0 0 chr17 26014627 26014723 -59423757 + AluSg/x SINE Alu 190 285 -25 12364 127 50 81 chr17 26014737 26014830 -59423650 - Tigger1 DNA MER2_type -111 2307 2213 2441 75 7 3 chr17 26014830 26015137 -59423343 - AluSc SINE Alu -1 308 1 12364 127 50 81 chr17 26015137 26015817 -59422663 - Tigger1 DNA MER2_type -205 2213 1514 2288 101 3 3 chr17 26015817 26016114 -59422366 - AluSx SINE Alu -15 297 1 2219 106 6 3 chr17 26016123 26016434 -59422046 - AluSp SINE Alu -1 312 1 12364 127 50 81 chr17 26016434 26016912 -59421568 - Tigger1 DNA MER2_type -912 1506 1015 831 143 0 30 chr17 26016912 26017045 -59421435 + FLAM_C SINE Alu 1 129 -4 12364 127 50 81 chr17 26017045 26017060 -59421420 - Tigger1 DNA MER2_type -1403 1015 1001 691 144 36 0 chr17 26017060 26017171 -59421309 + AluSg/x SINE Alu 186 300 -12 12364 127 50 81 chr17 26017171 26017274 -59421206 - Tigger1 DNA MER2_type -1417 1001 896 2068 125 3 28 chr17 26017274 26017593 -59420887 - AluSx SINE Alu -1 311 1 12364 127 50 81 chr17 26017593 26018478 -59420002 - Tigger1 DNA MER2_type -1522 896 1 2274 98 3 7 chr17 26018491 26018797 -59419683 - AluSc SINE Alu -4 305 1 22 35 0 0 chr17 26018798 26018827 -59419653 + AT_rich Low_complexity Low_complexity 1 29 0 1462 190 0 0 chr17 26018851 26019093 -59419387 + AluJb SINE Alu 36 277 -35 496 228 94 8 chr17 26020000 26020127 -59418353 + MIR SINE MIR 105 242 -20 885 216 138 16 chr17 26020170 26020391 -59418089 + MER2 DNA MER2_type 2 271 -73 2272 109 0 13 chr17 26020391 26020703 -59417777 - AluY SINE Alu -3 308 1 885 216 138 16 chr17 26020703 26020786 -59417694 + MER2 DNA MER2_type 271 343 -1 21 36 0 0 chr17 26020895 26020923 -59417557 + AT_rich Low_complexity Low_complexity 1 28 0 35 0 0 0 chr17 26021025 26021060 -59417420 + AT_rich Low_complexity Low_complexity 1 35 0 35 41 0 0 chr17 26021147 26021196 -59417284 + AT_rich Low_complexity Low_complexity 1 49 0 335 351 24 6 chr17 26022167 26022332 -59416148 - MIR3 SINE MIR -5 203 36 1939 124 0 78 chr17 26022398 26022720 -59415760 + AluSx SINE Alu 1 297 -15 2343 113 0 3 chr17 26024146 26024456 -59414024 + AluSx SINE Alu 1 309 -3 1188 144 36 22 chr17 26024553 26024768 -59413712 + Charlie1 DNA MER1_type 1734 1954 -807 1795 108 8 4 chr17 26024768 26025019 -59413461 - AluSx SINE Alu -15 297 46 1820 144 7 20 chr17 26025047 26025346 -59413134 - AluJb SINE Alu -13 299 5 2428 87 3 0 chr17 26026195 26026494 -59411986 - AluSg SINE Alu -10 300 1 1443 164 36 75 chr17 26026671 26026976 -59411504 + AluJb SINE Alu 3 295 -17 1962 148 10 0 chr17 26027479 26027782 -59410698 - AluSx SINE Alu -6 306 1 1020 123 18 0 chr17 26027829 26027992 -59410488 + AluY SINE Alu 136 301 -10 1737 181 0 21 chr17 26028139 26028426 -59410054 + AluJb SINE Alu 1 281 -31 651 184 0 24 chr17 26028525 26028650 -59409830 + FLAM_A SINE Alu 4 125 -8 2170 129 3 0 chr17 26028779 26029074 -59409406 + AluSx SINE Alu 1 296 -16 232 184 158 26 chr17 26029261 26029337 -59409143 - MER91C DNA MER1_type -19 121 36 2379 64 40 0 chr17 26030569 26030865 -59407615 + AluY SINE Alu 1 308 -3 1836 165 0 14 chr17 26030932 26031238 -59407242 + AluJb SINE Alu 2 303 0 874 197 0 0 chr17 26031254 26031406 -59407074 + AluJb SINE Alu 144 295 -17 185 338 94 31 chr17 26031580 26031740 -59406740 - L3 LINE CR1 -7 1570 1401 2029 163 0 0 chr17 26032120 26032421 -59406059 - AluJb SINE Alu -11 301 1 704 164 19 6 chr17 26032427 26032586 -59405894 + CT-rich Low_complexity Low_complexity 3 163 0 2438 93 3 0 chr17 26032595 26032906 -59405574 - AluSp SINE Alu -1 312 1 1512 156 80 43 chr17 26033227 26033528 -59404952 - AluJb SINE Alu 0 312 1 1365 167 18 0 chr17 26033685 26033912 -59404568 - AluJb SINE Alu -81 231 1 2500 82 0 0 chr17 26034802 26035106 -59403374 - AluY SINE Alu -7 304 1 397 251 36 119 chr17 26037314 26037417 -59401063 + Charlie8 DNA MER1_type 10 120 -221 1615 150 29 25 chr17 26037417 26037691 -59400789 + AluJb SINE Alu 1 275 -37 210 37 0 0 chr17 26037698 26037725 -59400755 + (TAAAA)n Simple_repeat Simple_repeat 2 28 0 2309 85 0 0 chr17 26037732 26038045 -59400435 + AluSc SINE Alu 1 313 0 397 251 36 119 chr17 26038045 26038143 -59400337 + Charlie8 DNA MER1_type 132 210 -131 1237 189 0 0 chr17 26038724 26038915 -59399565 + AluJ SINE Alu 1 191 -121 609 181 0 51 chr17 26038986 26039124 -59399356 + AluJ SINE Alu 166 296 -16 1827 146 10 17 chr17 26039125 26039419 -59399061 + AluSx SINE Alu 1 292 -20 27 0 0 0 chr17 26039422 26039449 -59399031 + AT_rich Low_complexity Low_complexity 1 27 0 1835 146 14 24 chr17 26039489 26039783 -59398697 - AluJo SINE Alu -21 291 1 28 71 0 0 chr17 26041186 26041242 -59397238 + GC_rich Low_complexity Low_complexity 1 56 0 23 68 0 0 chr17 26041278 26041322 -59397158 + GC_rich Low_complexity Low_complexity 1 44 0 27 62 0 0 chr17 26041581 26041629 -59396851 + GC_rich Low_complexity Low_complexity 1 48 0 200 254 9 26 chr17 26042789 26042903 -59395577 + (CGGG)n Simple_repeat Simple_repeat 2 113 0 1891 121 44 0 chr17 26044092 26044365 -59394115 - AluSx SINE Alu -27 285 1 2241 86 3 16 chr17 26044593 26044896 -59393584 - AluY SINE Alu -12 299 1 2210 92 0 20 chr17 26044906 26045200 -59393280 - AluSx SINE Alu -24 288 1 1932 149 3 19 chr17 26045328 26045636 -59392844 - AluJb SINE Alu -7 305 3 1615 164 27 0 chr17 26045877 26046163 -59392317 - AluJo SINE Alu 0 306 14 324 0 0 0 chr17 26046246 26046282 -59392198 + (CA)n Simple_repeat Simple_repeat 2 37 0 7170 55 19 13 chr17 26047353 26048855 -59389625 + SVA Other Other 23 1376 -10 344 248 0 92 chr17 26048936 26049045 -59389435 + MER58 DNA MER1_type 1 99 -116 2593 57 0 0 chr17 26049052 26049352 -59389128 + AluY SINE Alu 2 301 -10 305 143 191 0 chr17 26049369 26049432 -59389048 + MER58 DNA MER1_type 2318 2392 -28 356 170 13 137 chr17 26049599 26049752 -59388728 - AluSq/x SINE Alu -166 136 3 2095 143 0 6 chr17 26050273 26050587 -59387893 - AluJb SINE Alu 0 312 1 2052 138 0 25 chr17 26050749 26051068 -59387412 + AluSx SINE Alu 1 311 -1 421 338 24 24 chr17 26051250 26051457 -59387023 + L1ME LINE L1 5526 5732 -2076 1668 137 0 12 chr17 26051479 26051720 -59386760 + AluSx SINE Alu 64 301 -11 235 235 0 0 chr17 26051728 26051779 -59386701 + L1ME LINE L1 5731 5781 -340 1143 126 0 0 chr17 26051828 26051979 -59386501 + AluSc SINE Alu 1 151 -158 183 42 0 0 chr17 26052131 26052155 -59386325 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 2639 33 0 20 chr17 26052163 26052467 -59386013 + AluY SINE Alu 1 298 -13 829 141 0 8 chr17 26053615 26053743 -59384737 + AluSg/x SINE Alu 152 278 -32 210 37 0 0 chr17 26053743 26053770 -59384710 + (TAAA)n Simple_repeat Simple_repeat 1 27 0 2571 32 0 19 chr17 26053775 26054087 -59384393 + AluY SINE Alu 1 306 -5 1780 181 0 9 chr17 26054993 26055172 -59383308 - AluJo SINE Alu 0 312 136 2041 102 20 3 chr17 26055172 26055465 -59383015 - AluSx SINE Alu -14 298 1 1780 181 0 9 chr17 26055465 26055600 -59382880 - AluJo SINE Alu -176 136 1 721 212 0 0 chr17 26055609 26055741 -59382739 - FLAM_C SINE Alu 0 133 2 1559 172 10 23 chr17 26055788 26056090 -59382390 + AluJo SINE Alu 12 309 -3 2159 125 0 0 chr17 26056181 26056492 -59381988 - AluSx SINE Alu -1 311 1 2074 112 7 0 chr17 26056702 26056987 -59381493 + AluSx SINE Alu 1 287 -25 1183 143 21 149 chr17 26057574 26057910 -59380570 - AluJb SINE Alu -9 293 1 1854 134 7 0 chr17 26057912 26058202 -59380278 - AluSc SINE Alu -17 292 1 352 111 0 0 chr17 26058209 26058263 -59380217 - FAM SINE Alu 0 179 126 314 129 27 0 chr17 26058265 26058319 -59380161 - AluJo/FLAM SINE Alu -176 126 86 1955 137 6 6 chr17 26058335 26058648 -59379832 + AluSq SINE Alu 1 313 0 2011 116 10 3 chr17 26058667 26058961 -59379519 + AluSx SINE Alu 6 301 -11 2084 109 0 26 chr17 26059252 26059555 -59378925 - AluSx SINE Alu -17 295 1 959 141 17 23 chr17 26059727 26059904 -59378576 - AluJb SINE Alu -132 180 5 1765 123 0 105 chr17 26060024 26060366 -59378114 + AluSx SINE Alu 7 312 0 1194 249 112 28 chr17 26061744 26062243 -59376237 + L1M4 LINE L1 4591 5131 -1015 2482 199 51 0 chr17 26062264 26062756 -59375724 - L1MB5 LINE L1 -1 6173 5657 4355 148 38 15 chr17 26062777 26063568 -59374912 - L1MA7 LINE L1 -12 6279 5471 1338 154 9 5 chr17 26063577 26063798 -59374682 - AluSg/x SINE Alu -20 290 69 2224 103 0 0 chr17 26063798 26064100 -59374380 - AluSq SINE Alu -11 302 1 584 181 0 11 chr17 26064100 26064194 -59374286 - MER2 DNA MER2_type -252 93 1 353 188 0 0 chr17 26064217 26064286 -59374194 + L1ME2 LINE L1 6075 6143 -21 2256 83 6 13 chr17 26064818 26065132 -59373348 - AluSx SINE Alu 0 312 1 291 91 30 45 chr17 26065148 26065214 -59373266 + T-rich Low_complexity Low_complexity 4 68 0 1936 138 0 31 chr17 26065216 26065394 -59373086 - AluJb SINE Alu -3 309 144 1984 126 0 0 chr17 26065394 26065687 -59372793 - AluSx SINE Alu -15 297 5 1936 138 0 31 chr17 26065687 26065827 -59372653 - AluJb SINE Alu -168 144 1 2402 75 0 0 chr17 26066100 26066405 -59372075 - AluY SINE Alu -6 305 1 1560 182 14 0 chr17 26067076 26067356 -59371124 - AluJo SINE Alu -16 296 13 1691 167 0 13 chr17 26067466 26067765 -59370715 - AluJb SINE Alu -16 296 2 1278 160 9 124 chr17 26068080 26068418 -59370062 - AluJb SINE Alu -13 299 1 1700 176 58 3 chr17 26068418 26068765 -59369715 - L1MB4 LINE L1 -39 6141 5776 2020 85 4 7 chr17 26068766 26069037 -59369443 - AluSc SINE Alu -15 294 25 214 178 0 0 chr17 26069165 26069210 -59369270 + (TAAA)n Simple_repeat Simple_repeat 4 48 0 2114 105 0 3 chr17 26069282 26069577 -59368903 - AluY SINE Alu -17 294 1 1508 173 10 23 chr17 26070108 26070408 -59368072 - AluJb SINE Alu -6 306 11 1613 167 10 26 chr17 26070465 26070770 -59367710 + AluJb SINE Alu 1 300 -12 833 177 38 0 chr17 26070999 26071157 -59367323 - AluSg/x SINE Alu -18 292 129 2297 86 0 13 chr17 26071157 26071471 -59367009 - AluSg SINE Alu 0 310 1 2311 81 0 0 chr17 26072151 26072448 -59366032 + AluY SINE Alu 1 297 -14 1946 124 0 3 chr17 26072454 26072734 -59365746 + AluSg SINE Alu 1 281 -29 180 0 0 0 chr17 26072734 26072754 -59365726 + (CAAAC)n Simple_repeat Simple_repeat 1 20 0 1842 127 0 27 chr17 26072773 26073072 -59365408 + AluSx SINE Alu 1 291 -21 1693 165 16 13 chr17 26073289 26073592 -59364888 + AluJo SINE Alu 4 307 -5 2155 95 0 16 chr17 26073597 26073913 -59364567 + AluY SINE Alu 1 311 0 511 185 108 0 chr17 26074592 26074722 -59363758 - L1ME4a LINE L1 0 6121 5978 2037 113 0 13 chr17 26074727 26075029 -59363451 - AluSx SINE Alu -5 307 10 1230 147 13 108 chr17 26075161 26075467 -59363013 + AluSx SINE Alu 12 288 -24 545 130 0 0 chr17 26075839 26075916 -59362564 + AluSp/q SINE Alu 220 296 -17 2191 78 7 0 chr17 26075916 26076234 -59362246 + AluSp SINE Alu 1 320 0 2328 76 3 0 chr17 26077642 26077945 -59360535 + AluY SINE Alu 1 304 -7 2119 120 0 0 chr17 26078233 26078534 -59359946 - AluSx SINE Alu -11 301 1 857 229 36 52 chr17 26079418 26079445 -59359035 + MIR SINE MIR 7 33 -229 2286 68 0 0 chr17 26079445 26079739 -59358741 + AluY SINE Alu 1 294 -17 857 229 36 52 chr17 26079739 26079960 -59358520 + MIR SINE MIR 33 251 -11 1162 101 0 6 chr17 26080288 26080456 -59358024 - AluSg/x SINE Alu -17 295 129 2219 93 0 3 chr17 26080478 26080789 -59357691 - AluY SINE Alu -1 310 1 1119 131 5 26 chr17 26080819 26081010 -59357470 + L1PB4 LINE L1 5968 6154 -2 215 271 0 0 chr17 26081875 26081923 -59356557 + (TA)n Simple_repeat Simple_repeat 2 49 0 319 28 0 0 chr17 26082233 26082269 -59356211 + U2 snRNA snRNA 1 36 -152 183 42 0 0 chr17 26083175 26083199 -59355281 + (TTTTG)n Simple_repeat Simple_repeat 4 27 0 188 197 0 16 chr17 26085306 26085367 -59353113 + (TATG)n Simple_repeat Simple_repeat 3 62 0 23 0 0 0 chr17 26087547 26087570 -59350910 + AT_rich Low_complexity Low_complexity 1 23 0 189 0 0 0 chr17 26088823 26088844 -59349636 + (TTTTG)n Simple_repeat Simple_repeat 4 24 0 22 35 0 0 chr17 26089605 26089634 -59348846 + AT_rich Low_complexity Low_complexity 1 29 0 2052 85 39 0 chr17 26090686 26090964 -59347516 + AluSx SINE Alu 3 292 -16 228 35 0 0 chr17 26090964 26090993 -59347487 + (TA)n Simple_repeat Simple_repeat 1 29 0 1644 95 25 104 chr17 26091392 26091709 -59346771 + AluYb8 SINE Alu 1 292 -26 270 0 0 0 chr17 26091713 26091743 -59346737 + (TAAA)n Simple_repeat Simple_repeat 2 31 0 1180 68 43 0 chr17 26091743 26091905 -59346575 + AluSc SINE Alu 126 294 -15 298 282 97 0 chr17 26100658 26100761 -59337719 + L2 LINE L2 2595 2707 -607 1510 139 91 15 chr17 26100850 26101124 -59337356 + AluJo SINE Alu 1 295 -17 496 268 87 0 chr17 26101126 26101264 -59337216 - MIR SINE MIR -48 214 65 470 313 43 19 chr17 26101425 26101633 -59336847 + L2 LINE L2 3055 3267 -5 2322 61 6 22 chr17 26102153 26102465 -59336015 - AluSp SINE Alu -6 307 1 450 240 0 25 chr17 26103761 26103882 -59334598 - MIR SINE MIR -94 168 51 333 234 0 90 chr17 26104565 26104676 -59333804 - MIR3 SINE MIR -47 161 61 226 321 82 37 chr17 26105038 26105172 -59333308 - MIR SINE MIR -1 261 122 248 316 0 0 chr17 26105654 26105730 -59332750 - MIR SINE MIR -129 133 58 512 16 0 0 chr17 26106346 26106409 -59332071 - AluY SINE Alu -9 301 239 659 228 35 53 chr17 26107469 26107587 -59330893 + L1ME3 LINE L1 5932 6046 -116 1345 97 46 84 chr17 26107587 26107825 -59330655 - MER30 DNA MER1_type 0 230 2 659 228 35 53 chr17 26107825 26107934 -59330546 + L1ME3 LINE L1 6046 6155 -7 266 311 22 33 chr17 26108695 26108785 -59329695 - L2 LINE L2 -14 3258 3170 271 363 48 30 chr17 26109028 26109196 -59329284 - MIR3 SINE MIR 0 208 38 33 66 0 0 chr17 26110648 26110709 -59327771 + GC_rich Low_complexity Low_complexity 1 61 0 47 53 0 0 chr17 26110804 26110879 -59327601 + GC_rich Low_complexity Low_complexity 1 75 0 253 209 27 45 chr17 26110884 26110994 -59327486 + (CCCG)n Simple_repeat Simple_repeat 4 111 0 30 45 0 0 chr17 26111069 26111113 -59327367 + GC_rich Low_complexity Low_complexity 1 44 0 271 285 133 46 chr17 26113563 26113714 -59324766 - MIR SINE MIR -71 191 28 33 85 0 0 chr17 26114597 26114679 -59323801 + GC_rich Low_complexity Low_complexity 1 82 0 267 163 48 48 chr17 26114782 26114948 -59323532 + (CCGCG)n Simple_repeat Simple_repeat 5 170 0 26 0 0 0 chr17 26114968 26114994 -59323486 + GC_rich Low_complexity Low_complexity 1 26 0 25 90 0 0 chr17 26115135 26115202 -59323278 + GC_rich Low_complexity Low_complexity 1 67 0 205 274 32 16 chr17 26116587 26116649 -59321831 - L2 LINE L2 -65 3248 3186 31 26 0 0 chr17 26119675 26119713 -59318767 + AT_rich Low_complexity Low_complexity 1 38 0 274 277 158 28 chr17 26119714 26119891 -59318589 - HAL1 LINE L1 0 2507 2308 263 120 0 20 chr17 26119891 26119941 -59318539 + (TCCC)n Simple_repeat Simple_repeat 3 51 0 1978 134 3 16 chr17 26119941 26120247 -59318233 - AluJb SINE Alu 0 312 11 461 272 283 25 chr17 26120326 26120609 -59317871 - L2 LINE L2 0 3313 2958 702 303 98 25 chr17 26120655 26120972 -59317508 - L2 LINE L2 -527 2787 2448 768 274 138 73 chr17 26121144 26121274 -59317206 - HAL1 LINE L1 -1488 1019 899 2596 45 0 0 chr17 26121274 26121585 -59316895 - AluY SINE Alu 0 311 1 768 274 138 73 chr17 26121585 26122316 -59316164 - HAL1 LINE L1 -1608 899 102 1803 142 27 3 chr17 26122332 26122628 -59315852 - AluJb SINE Alu -9 303 1 2291 90 0 0 chr17 26122633 26122933 -59315547 - AluSx SINE Alu -12 300 1 1489 244 60 101 chr17 26122947 26123468 -59315012 - L1MEc LINE L1 -4593 1803 1262 1284 224 173 43 chr17 26123468 26123525 -59314955 - MLT1D LTR MaLR -1 504 456 2523 53 0 0 chr17 26123525 26123825 -59314655 + AluY SINE Alu 1 300 -11 1284 224 173 43 chr17 26123825 26124213 -59314267 - MLT1D LTR MaLR -49 456 1 1489 244 60 101 chr17 26124213 26124250 -59314230 - L1MEc LINE L1 -5134 1262 1225 2219 106 3 6 chr17 26124250 26124561 -59313919 - AluSg SINE Alu 0 310 1 1489 244 60 101 chr17 26124561 26124672 -59313808 - L1MEc LINE L1 -5171 1225 1111 1589 122 39 16 chr17 26124672 26124828 -59313652 - AluJo SINE Alu -30 282 116 234 0 0 0 chr17 26124828 26124854 -59313626 + (TTTTG)n Simple_repeat Simple_repeat 3 28 0 1589 122 39 16 chr17 26124854 26124951 -59313529 - AluJo SINE Alu -196 116 23 1489 244 60 101 chr17 26124951 26125281 -59313199 - L1MEc LINE L1 -5285 1111 843 835 153 21 47 chr17 26125281 26125471 -59313009 - AluJb SINE Alu -6 306 122 1129 290 59 57 chr17 26125471 26125628 -59312852 - L1MEc LINE L1 -5558 838 683 1937 140 3 3 chr17 26125628 26125920 -59312560 - AluJb SINE Alu -20 292 1 1129 290 59 57 chr17 26125920 26125941 -59312539 - L1MEc LINE L1 -5713 683 664 2257 109 0 3 chr17 26125941 26126254 -59312226 - AluSx SINE Alu 0 312 1 1129 290 59 57 chr17 26126254 26126753 -59311727 - L1MEc LINE L1 -5732 664 159 330 330 22 0 chr17 26126801 26126892 -59311588 - L1MC4 LINE L1 -1336 6706 6614 1120 138 11 11 chr17 26126893 26127074 -59311406 - AluJb SINE Alu -27 285 105 886 150 6 60 chr17 26127205 26127372 -59311108 - AluJb SINE Alu -132 180 23 1795 163 7 0 chr17 26127433 26127722 -59310758 + AluSx SINE Alu 3 293 -19 383 319 38 6 chr17 26127726 26127883 -59310597 - L2 LINE L2 -254 3059 2898 1835 126 51 10 chr17 26128167 26128299 -59310181 + AluSx SINE Alu 1 126 -186 2344 74 0 7 chr17 26128299 26128597 -59309883 + AluY SINE Alu 1 296 -15 1835 126 51 10 chr17 26128597 26128757 -59309723 + AluSx SINE Alu 126 305 -7 2082 123 7 0 chr17 26128786 26129087 -59309393 + AluSp SINE Alu 1 303 -10 1096 171 0 0 chr17 26129087 26129263 -59309217 + AluSg/x SINE Alu 134 309 -3 2152 83 3 17 chr17 26129328 26129637 -59308843 + AluSp SINE Alu 1 305 0 1650 132 0 98 chr17 26130037 26130256 -59308224 - AluY SINE Alu 0 311 149 2278 93 3 0 chr17 26130256 26130567 -59307913 - AluSp SINE Alu -1 312 1 1650 132 0 98 chr17 26130567 26130703 -59307777 - AluY SINE Alu -162 149 1 2124 110 0 0 chr17 26130794 26131107 -59307373 - AluSx SINE Alu 0 312 1 947 194 5 38 chr17 26131118 26131329 -59307151 + L1PB4 LINE L1 5951 6154 -2 297 107 0 36 chr17 26131653 26131709 -59306771 + FAM SINE Alu 126 179 0 2044 130 0 16 chr17 26131724 26132039 -59306441 + AluSx SINE Alu 3 312 0 531 289 254 3 chr17 26133229 26133544 -59304936 + L2 LINE L2 2920 3313 0 272 174 0 72 chr17 26134587 26134656 -59303824 - MIR SINE MIR -69 193 130 718 250 35 6 chr17 26134680 26134852 -59303628 - MIR SINE MIR -70 192 16 2210 84 10 3 chr17 26134868 26135166 -59303314 + AluSx SINE Alu 1 300 -12 499 236 32 8 chr17 26135341 26135464 -59303016 + L2 LINE L2 3175 3300 -13 273 57 0 0 chr17 26135464 26135499 -59302981 + (TGAA)n Simple_repeat Simple_repeat 1 35 0 478 287 44 11 chr17 26135842 26136023 -59302457 + MER117 DNA MER1_type 8 194 -3 211 287 217 11 chr17 26141369 26141558 -59296922 - MIR SINE MIR -8 254 20 271 279 23 0 chr17 26144905 26144991 -59293489 - MIR SINE MIR -68 140 53 779 229 21 54 chr17 26149183 26149248 -59289232 - MIR SINE MIR -30 232 166 2154 118 0 13 chr17 26149248 26149562 -59288918 + AluSx SINE Alu 1 310 -2 779 229 21 54 chr17 26149562 26149736 -59288744 - MIR SINE MIR -96 166 1 214 195 0 0 chr17 26151220 26151261 -59287219 + A-rich Low_complexity Low_complexity 1 41 0 221 0 35 0 chr17 26152881 26152910 -59285570 + (GA)n Simple_repeat Simple_repeat 2 31 0 2412 67 0 0 chr17 26159497 26159804 -59278676 - AluSc SINE Alu 0 307 1 2180 99 7 3 chr17 26159873 26160155 -59278325 - AluSg SINE Alu -27 283 1 2498 50 0 17 chr17 26160361 26160661 -59277819 - AluY SINE Alu -16 295 1 23 0 0 0 chr17 26160776 26160799 -59277681 + AT_rich Low_complexity Low_complexity 1 23 0 370 271 91 104 chr17 26161886 26162065 -59276415 + L1ME4a LINE L1 5373 5553 -2255 1602 137 60 4 chr17 26162065 26162314 -59276166 - AluSx SINE Alu -10 302 40 370 271 91 104 chr17 26162314 26162452 -59276028 + L1ME4a LINE L1 5553 5691 -2117 1950 147 6 10 chr17 26162452 26162765 -59275715 + AluJb SINE Alu 1 312 0 370 271 91 104 chr17 26162765 26162786 -59275694 + L1ME4a LINE L1 5691 5711 -2097 2216 119 0 3 chr17 26162786 26163096 -59275384 + AluSx SINE Alu 1 309 -3 370 271 91 104 chr17 26163096 26163205 -59275275 + L1ME4a LINE L1 5711 5816 -1992 315 270 31 43 chr17 26163364 26163465 -59275015 + L1ME4a LINE L1 5960 6061 -60 477 0 0 0 chr17 26163465 26163518 -59274962 + (CA)n Simple_repeat Simple_repeat 2 54 0 1636 135 35 42 chr17 26163518 26163802 -59274678 - AluJo SINE Alu -30 282 1 315 270 31 43 chr17 26163802 26163867 -59274613 + L1ME4a LINE L1 6059 6120 -1 2607 43 7 3 chr17 26165029 26165332 -59273148 - AluY SINE Alu -7 304 1 252 164 18 0 chr17 26165812 26165867 -59272613 - L1ME3 LINE L1 -211 5951 5896 1594 106 0 5 chr17 26165960 26166167 -59272313 - AluSx SINE Alu -106 206 1 31 0 0 0 chr17 26166548 26166579 -59271901 + AT_rich Low_complexity Low_complexity 1 31 0 576 103 0 0 chr17 26166581 26166659 -59271821 - U6 snRNA snRNA -29 78 1 443 157 11 67 chr17 26166797 26166886 -59271594 + FLAM_A SINE Alu 18 101 -41 24 0 0 0 chr17 26166894 26166918 -59271562 + AT_rich Low_complexity Low_complexity 1 24 0 257 288 104 24 chr17 26168234 26168359 -59270121 + MLT1L LTR MaLR 5 139 -476 890 99 25 0 chr17 26168369 26168490 -59269990 - AluY SINE Alu -15 296 173 1907 110 4 4 chr17 26168493 26168748 -59269732 - AluSq SINE Alu -58 255 1 1092 246 144 50 chr17 26169076 26169481 -59268999 + LTR33 LTR ERVL 10 468 -53 2240 74 33 0 chr17 26169481 26169788 -59268692 + AluSc SINE Alu 1 316 0 1092 246 144 50 chr17 26169788 26169844 -59268636 + LTR33 LTR ERVL 468 517 -4 354 299 73 6 chr17 26170111 26170275 -59268205 - MIR SINE MIR -68 194 20 2254 104 0 0 chr17 26171465 26171752 -59266728 - AluSg SINE Alu -23 287 1 2312 64 43 0 chr17 26171947 26172229 -59266251 + AluY SINE Alu 1 294 -17 584 141 0 0 chr17 26172240 26172332 -59266148 + AluSg/x SINE Alu 217 308 -4 255 240 0 0 chr17 26172571 26172621 -59265859 - MER66B LTR ERV1 -138 348 299 2243 98 10 0 chr17 26172626 26172922 -59265558 - AluSq SINE Alu -14 299 1 354 315 62 15 chr17 26173524 26173654 -59264826 - L2 LINE L2 -1 3271 3136 1109 112 0 0 chr17 26173672 26173815 -59264665 + AluSq/x SINE Alu 1 143 -169 2273 101 0 7 chr17 26173816 26174112 -59264368 + AluSg SINE Alu 1 294 -16 268 250 173 10 chr17 26174144 26174248 -59264232 - MER96 DNA MER1_type? -46 129 9 1080 165 46 60 chr17 26174380 26174598 -59263882 - AluJb SINE Alu -52 260 46 325 244 159 28 chr17 26174785 26174961 -59263519 + L3b LINE CR1 1317 1515 -68 268 295 150 10 chr17 26175318 26175511 -59262969 - L3b LINE CR1 -201 1382 1163 28 0 0 0 chr17 26176782 26176810 -59261670 + AT_rich Low_complexity Low_complexity 1 28 0 2346 91 3 0 chr17 26176818 26177115 -59261365 + AluSq SINE Alu 1 298 -15 829 232 6 0 chr17 26177115 26177292 -59261188 + L1MB8 LINE L1 5556 5733 -445 903 197 35 5 chr17 26177324 26177527 -59260953 + L1MB8 LINE L1 5970 6178 0 2104 115 3 16 chr17 26177600 26177913 -59260567 - AluSg SINE Alu -1 309 1 22 0 0 0 chr17 26177916 26177938 -59260542 + AT_rich Low_complexity Low_complexity 1 22 0 2175 130 0 3 chr17 26178546 26178845 -59259635 - AluSx SINE Alu -14 298 1 180 286 0 0 chr17 26179012 26179054 -59259426 - MIR SINE MIR -133 75 34 262 248 95 29 chr17 26179133 26179238 -59259242 - L2 LINE L2 -2 3270 3159 307 227 125 0 chr17 26179806 26179894 -59258586 + L2 LINE L2 3169 3267 -5 2477 66 3 3 chr17 26180057 26180360 -59258120 - AluY SINE Alu -8 303 1 256 296 61 38 chr17 26180691 26180823 -59257657 - MIR SINE MIR -48 214 80 520 258 60 11 chr17 26180895 26181077 -59257403 + L2 LINE L2 3115 3305 -8 2202 107 0 3 chr17 26181142 26181433 -59257047 - AluSg SINE Alu -20 290 1 629 194 105 144 chr17 26181622 26181939 -59256541 - L1MC4 LINE L1 -85 7957 7629 2005 133 35 0 chr17 26181939 26182224 -59256256 - AluSx SINE Alu -17 295 1 2345 80 7 7 chr17 26182227 26182526 -59255954 - AluSq SINE Alu -14 299 1 1979 122 40 16 chr17 26182533 26182836 -59255644 - AluJo SINE Alu -2 310 1 629 194 105 144 chr17 26182836 26182965 -59255515 - L1MC4 LINE L1 -421 7621 7517 2274 90 10 13 chr17 26182967 26183267 -59255213 - AluSp SINE Alu -14 299 1 990 189 6 0 chr17 26183270 26183439 -59255041 - FAM SINE Alu -5 170 1 8394 90 8 9 chr17 26183606 26184719 -59253761 - HERV9 LTR ERV1 -6126 2273 1162 247 335 99 17 chr17 26184839 26185145 -59253335 + L2 LINE L2 2719 3053 -219 219 346 13 0 chr17 26185307 26185385 -59253095 + L2 LINE L2 3229 3307 -6 1926 125 20 27 chr17 26186650 26186945 -59251535 - AluJo SINE Alu -19 293 1 31 26 0 0 chr17 26186948 26186986 -59251494 + AT_rich Low_complexity Low_complexity 1 38 0 1182 82 0 0 chr17 26187396 26187542 -59250938 + AluSp/q SINE Alu 163 308 -5 480 212 95 78 chr17 26187583 26187866 -59250614 - L1MC4a LINE L1 -1780 6028 5741 1280 210 93 3 chr17 26187869 26188160 -59250320 - L1MC4a LINE L1 -2166 5642 5326 2255 73 3 18 chr17 26188171 26188477 -59250003 - AluY SINE Alu 0 302 1 2285 99 3 0 chr17 26188493 26188777 -59249703 - AluSc SINE Alu -24 285 1 243 309 32 49 chr17 26188828 26188919 -59249561 + MIR SINE MIR 26 116 -146 2295 102 0 3 chr17 26188919 26189214 -59249266 - AluSc SINE Alu -15 294 1 243 309 32 49 chr17 26189214 26189245 -59249235 + MIR SINE MIR 116 146 -116 546 85 0 0 chr17 26189507 26189589 -59248891 + AluSp/q SINE Alu 228 309 -4 1194 20 34 7 chr17 26191134 26191281 -59247199 - L1PA13 LINE L1 -2 6161 6011 1511 134 17 70 chr17 26192228 26192527 -59245953 + L1MC1 LINE L1 6039 6321 -12 2146 107 28 3 chr17 26192601 26192891 -59245589 + AluSg SINE Alu 1 297 -13 831 193 7 7 chr17 26193009 26193159 -59245321 - FRAM SINE Alu -26 150 1 2223 77 40 10 chr17 26194083 26194380 -59244100 - AluSg SINE Alu -4 306 1 253 268 179 8 chr17 26194547 26194670 -59243810 - MIR SINE MIR -26 236 93 233 29 0 29 chr17 26194702 26194737 -59243743 + (TC)n Simple_repeat Simple_repeat 1 34 0 1859 138 0 24 chr17 26194744 26195033 -59243447 - AluJo SINE Alu -30 282 1 2024 137 10 3 chr17 26197397 26197703 -59240777 + AluSx SINE Alu 1 308 -4 2304 90 0 57 chr17 26197865 26198197 -59240283 + AluSq SINE Alu 1 313 0 405 254 62 15 chr17 26198200 26198330 -59240150 + MER103 DNA DNA 2 137 -29 2513 68 0 0 chr17 26199431 26199738 -59238742 - AluY SINE Alu -4 307 1 1029 188 140 0 chr17 26199820 26200027 -59238453 - AluJo SINE Alu -76 236 1 1879 135 38 3 chr17 26200076 26200364 -59238116 + AluSx SINE Alu 1 298 -14 2411 79 7 0 chr17 26200767 26201070 -59237410 - AluSp SINE Alu -8 305 1 1991 145 7 3 chr17 26201120 26201424 -59237056 - AluSx SINE Alu -7 305 1 2280 92 7 3 chr17 26201468 26201772 -59236708 - AluSq SINE Alu -8 305 1 1794 157 7 10 chr17 26202107 26202401 -59236079 + AluJb SINE Alu 11 303 -9 1111 179 77 77 chr17 26203236 26203600 -59234880 + MLT1A1 LTR MaLR 3 428 -4 22 35 0 0 chr17 26204110 26204139 -59234341 + AT_rich Low_complexity Low_complexity 1 29 0 21 57 0 0 chr17 26204170 26204205 -59234275 + AT_rich Low_complexity Low_complexity 1 35 0 268 176 44 15 chr17 26204695 26204763 -59233717 - L1MD3 LINE L1 0 7995 7926 2216 133 0 0 chr17 26204764 26205066 -59233414 - AluJb SINE Alu -10 302 1 480 261 24 29 chr17 26205084 26205291 -59233189 - L1MC4 LINE L1 -150 7892 7687 314 247 35 0 chr17 26205316 26205401 -59233079 - L1M4 LINE L1 -2735 3411 3324 436 221 52 0 chr17 26205405 26205541 -59232939 - L1M4 LINE L1 -2959 3187 3045 1012 190 112 72 chr17 26205555 26205672 -59232808 - MER2 DNA MER2_type -2 343 232 2117 104 3 7 chr17 26205672 26205993 -59232487 - AluSp SINE Alu 0 320 1 1012 190 112 72 chr17 26205993 26206195 -59232285 - MER2 DNA MER2_type -113 232 10 1113 242 28 3 chr17 26206210 26206499 -59231981 - L1MC4 LINE L1 -509 7533 7238 1513 200 214 16 chr17 26206501 26207005 -59231475 - L1MC4 LINE L1 -958 7084 6481 2383 100 10 0 chr17 26207006 26207315 -59231165 - AluSx SINE Alu 0 312 1 2002 136 3 17 chr17 26207635 26207936 -59230544 - AluSx SINE Alu -15 297 1 1969 147 0 10 chr17 26207977 26208270 -59230210 - AluJo SINE Alu -14 298 9 1638 208 0 7 chr17 26208633 26208927 -59229553 - AluJo SINE Alu -20 292 1 26 74 0 0 chr17 26208997 26209051 -59229429 + AT_rich Low_complexity Low_complexity 1 54 0 2049 115 0 43 chr17 26209392 26209697 -59228783 + AluSx SINE Alu 16 307 -5 277 187 66 44 chr17 26209717 26209808 -59228672 - MER3 DNA MER1_type 0 209 117 1800 177 0 0 chr17 26210908 26211208 -59227272 + AluJb SINE Alu 5 304 -8 278 235 0 88 chr17 26211420 26211522 -59226958 + MER31A LTR ERV1 353 445 -40 26 30 0 0 chr17 26211525 26211558 -59226922 + AT_rich Low_complexity Low_complexity 1 33 0 23 33 0 0 chr17 26212098 26212128 -59226352 + AT_rich Low_complexity Low_complexity 1 30 0 2180 95 0 3 chr17 26212281 26212605 -59225875 - AluSx SINE Alu 0 323 1 180 273 0 0 chr17 26213112 26213156 -59225324 + MIR SINE MIR 217 260 -2 357 221 79 16 chr17 26213209 26213336 -59225144 + L1ME4a LINE L1 5957 6091 -30 523 270 67 29 chr17 26213546 26213623 -59224857 - MIR SINE MIR -39 223 150 2364 96 0 3 chr17 26213623 26213925 -59224555 - AluSq SINE Alu -12 301 1 523 270 67 29 chr17 26213925 26214061 -59224419 - MIR SINE MIR -112 150 8 1744 181 3 22 chr17 26214128 26214443 -59224037 - AluJb SINE Alu -3 309 1 1760 109 71 24 chr17 26215213 26215507 -59222973 - MER1B DNA MER1_type 0 339 32 315 131 20 30 chr17 26216094 26216193 -59222287 - MER63 DNA MER1_type -100 962 865 2116 109 0 0 chr17 26216216 26216491 -59221989 - AluSx SINE Alu -37 275 1 1909 153 0 13 chr17 26216495 26216802 -59221678 - AluJb SINE Alu -9 303 1 1094 165 84 123 chr17 26267853 26267985 -59170495 - AluJo SINE Alu -38 274 138 207 0 0 0 chr17 26267985 26268008 -59170472 + (CCTG)n Simple_repeat Simple_repeat 2 24 0 1094 165 84 123 chr17 26268008 26268160 -59170320 - AluJo SINE Alu -174 138 1 2137 114 0 19 chr17 26268192 26268507 -59169973 - AluSg SINE Alu -1 309 1 2164 117 20 0 chr17 26269206 26269505 -59168975 - AluSx SINE Alu -7 305 1 2285 108 23 0 chr17 26269609 26269914 -59168566 - AluSx SINE Alu 0 312 1 716 171 75 60 chr17 26269915 26270112 -59168368 - LTR8 LTR ERV1 -150 577 362 265 92 66 0 chr17 26270145 26270221 -59168259 + (TA)n Simple_repeat Simple_repeat 2 82 0 919 119 60 32 chr17 26270221 26270406 -59168074 - MLT2A1 LTR ERVL -40 404 215 4247 44 6 0 chr17 26270512 26271016 -59167464 - L1PA5 LINE L1 -58 6096 5590 194 262 0 0 chr17 26271016 26271058 -59167422 + MIR SINE MIR 89 130 -78 2520 71 0 3 chr17 26271067 26271378 -59167102 - AluY SINE Alu -1 310 1 242 284 0 25 chr17 26271378 26271459 -59167021 + MIR SINE MIR 112 190 -72 21 0 0 0 chr17 26272126 26272147 -59166333 + AT_rich Low_complexity Low_complexity 1 21 0 1837 165 26 0 chr17 26272258 26272561 -59165919 - AluJb SINE Alu -1 311 1 2454 78 0 0 chr17 26273254 26273563 -59164917 - AluY SINE Alu -2 309 1 21 0 0 0 chr17 26273904 26273925 -59164555 + AT_rich Low_complexity Low_complexity 1 21 0 1166 222 35 14 chr17 26274218 26274506 -59163974 + AluJb SINE Alu 1 294 -8 795 238 6 6 chr17 26274509 26274695 -59163785 + AluJo/FRAM SINE Alu 137 302 0 606 274 142 0 chr17 26274884 26275103 -59163377 + MIR SINE MIR 11 260 -2 243 346 112 0 chr17 26275178 26275285 -59163195 - MIR SINE MIR -90 172 54 32 0 0 0 chr17 26275343 26275375 -59163105 + AT_rich Low_complexity Low_complexity 1 32 0 1651 181 22 4 chr17 26275375 26275652 -59162828 - AluJo SINE Alu -30 282 1 1044 159 77 15 chr17 26275652 26275847 -59162633 - AluJo SINE Alu -8 304 98 1904 138 20 7 chr17 26276048 26276344 -59162136 + AluJb SINE Alu 1 300 -12 6847 82 11 4 chr17 26276636 26277942 -59160538 - L1PA11 LINE L1 -1 6173 4844 3253 162 164 41 chr17 26277942 26278786 -59159694 - MER52C LTR ERV1 -1 1277 16 1634 181 7 0 chr17 26278811 26279114 -59159366 - L1P LINE L1 -1297 4849 4545 1133 113 28 42 chr17 26279258 26279352 -59159128 - Tigger3b DNA MER2_type -2167 862 768 2026 130 3 19 chr17 26279352 26279659 -59158821 - AluSx SINE Alu -10 302 1 1133 113 28 42 chr17 26279659 26279776 -59158704 - Tigger3b DNA MER2_type -2261 768 654 2209 106 0 7 chr17 26279782 26280083 -59158397 + AluSx SINE Alu 1 299 -13 28 0 0 0 chr17 26280083 26280111 -59158369 + AT_rich Low_complexity Low_complexity 1 28 0 891 148 42 0 chr17 26280175 26280317 -59158163 - FRAM SINE Alu -30 146 1 1047 99 0 0 chr17 26280362 26280493 -59157987 + AluSc SINE Alu 1 131 -178 3247 139 58 23 chr17 26280507 26280762 -59157718 - Tigger3b DNA MER2_type -2454 574 329 2244 113 3 3 chr17 26280762 26281072 -59157408 + AluSp SINE Alu 1 310 -3 3247 139 58 23 chr17 26281072 26281371 -59157109 - Tigger3b DNA MER2_type -2699 329 1 487 321 59 41 chr17 26281378 26282177 -59156303 + L1M4 LINE L1 4188 5015 -1131 332 235 98 59 chr17 26282394 26282547 -59155933 + L1M LINE L1 5265 5423 -2385 664 246 181 0 chr17 26282553 26282752 -59155728 + MIR SINE MIR 14 248 -14 2070 111 3 14 chr17 26282764 26283061 -59155419 - AluSx SINE Alu -18 294 1 2148 83 35 7 chr17 26283145 26283434 -59155046 + AluSg SINE Alu 1 297 -13 1016 78 24 90 chr17 26283577 26283654 -59154826 + L1MA3 LINE L1 6146 6208 -97 2054 150 0 10 chr17 26283654 26283960 -59154520 - AluJb SINE Alu -9 303 1 1016 78 24 90 chr17 26283960 26284048 -59154432 + L1MA3 LINE L1 6208 6300 -5 22 56 0 0 chr17 26284049 26284085 -59154395 + AT_rich Low_complexity Low_complexity 1 36 0 210 343 171 0 chr17 26284387 26284492 -59153988 + MIR3 SINE MIR 11 133 -75 2024 103 0 0 chr17 26284634 26284947 -59153533 - AluSx SINE Alu 0 335 23 271 253 55 21 chr17 26285311 26285408 -59153072 + MIR SINE MIR 65 164 -67 2160 110 0 38 chr17 26287116 26287434 -59151046 - AluSg SINE Alu -4 306 1 2224 113 3 3 chr17 26288628 26288929 -59149551 + AluSx SINE Alu 1 301 -11 1984 125 7 0 chr17 26289048 26289329 -59149151 + AluSx SINE Alu 21 303 -9 2391 93 0 6 chr17 26289720 26290031 -59148449 + AluSc SINE Alu 1 309 0 2620 62 0 0 chr17 26290034 26290340 -59148140 + AluY SINE Alu 1 306 -5 443 236 245 14 chr17 26290505 26290721 -59147759 + L2 LINE L2 3044 3309 -4 261 302 170 19 chr17 26290773 26290879 -59147601 + MIR SINE MIR 23 144 -64 288 0 0 0 chr17 26291135 26291167 -59147313 + (TTTA)n Simple_repeat Simple_repeat 4 35 0 203 133 0 0 chr17 26291915 26291945 -59146535 + (GGA)n Simple_repeat Simple_repeat 1 30 0 2329 88 3 3 chr17 26293160 26293457 -59145023 + AluSg1 SINE Alu 1 297 -12 2109 87 76 0 chr17 26295412 26295701 -59142779 + AluY SINE Alu 1 311 0 4565 44 2 18 chr17 26295708 26296256 -59142224 + L1PA8 LINE L1 5628 6166 -6 220 224 276 40 chr17 26296281 26296433 -59142047 - L2 LINE L2 -121 3192 3005 317 273 142 79 chr17 26296524 26296912 -59141568 - L2 LINE L2 -261 3011 2564 1202 138 15 10 chr17 26298034 26298230 -59140250 + L1MA3 LINE L1 4016 4212 -1934 1125 101 0 0 chr17 26298230 26298378 -59140102 + AluSq/x SINE Alu 1 148 -164 519 156 0 0 chr17 26298378 26298455 -59140025 - AluY SINE Alu -237 81 5 6169 137 16 4 chr17 26298456 26300190 -59138290 + L1MA3 LINE L1 4209 5969 -336 1574 68 5 0 chr17 26300303 26300495 -59137985 + AluY SINE Alu 105 297 -14 1881 159 0 10 chr17 26301339 26301651 -59136829 - AluJo SINE Alu 0 309 1 414 248 121 7 chr17 26302028 26302169 -59136311 + MER45A DNA AcHobo 22 178 0 22 35 0 0 chr17 26303929 26303958 -59134522 + AT_rich Low_complexity Low_complexity 1 29 0 695 280 83 36 chr17 26303968 26304344 -59134136 + L1ME4a LINE L1 5514 5907 -214 1893 127 10 7 chr17 26304360 26304652 -59133828 - AluSq SINE Alu -20 293 1 2106 128 10 3 chr17 26304662 26304968 -59133512 - AluY SINE Alu -1 310 3 213 65 0 0 chr17 26304998 26305029 -59133451 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1667 172 0 53 chr17 26305050 26305370 -59133110 - AluJo SINE Alu -7 305 3 1982 125 3 3 chr17 26305378 26305673 -59132807 - AluSx SINE Alu -17 295 1 1702 157 62 0 chr17 26305673 26305947 -59132533 - AluSx SINE Alu -15 297 7 321 89 0 0 chr17 26306628 26306673 -59131807 + (T)n Simple_repeat Simple_repeat 1 45 0 357 256 97 84 chr17 26306875 26307113 -59131367 - L1M2 LINE L1 -5899 950 710 342 0 0 0 chr17 26307602 26307640 -59130840 + (TG)n Simple_repeat Simple_repeat 2 39 0 2407 99 0 0 chr17 26307885 26308197 -59130283 - AluSx SINE Alu 0 312 1 390 341 38 8 chr17 26308537 26308669 -59129811 - MIR SINE MIR -108 154 19 2336 108 0 6 chr17 26309003 26309317 -59129163 + AluSx SINE Alu 1 312 0 425 272 131 7 chr17 26311617 26311900 -59126580 + L1M4 LINE L1 3720 4037 -2109 2881 109 18 13 chr17 26311999 26312457 -59126023 - Tigger3b DNA MER2_type 0 1231 772 1109 162 0 0 chr17 26312462 26312629 -59125851 - AluSc SINE Alu -10 299 133 1048 99 0 0 chr17 26312674 26312805 -59125675 + AluSc SINE Alu 1 131 -178 1584 106 51 0 chr17 26312819 26313074 -59125406 - Tigger3b DNA MER2_type -657 574 307 420 208 21 0 chr17 26313439 26313535 -59124945 - AluJ/FLAM SINE Alu -214 98 1 302 122 0 0 chr17 26313561 26313610 -59124870 + MADE1 DNA Mariner 1 49 -31 2302 140 30 14 chr17 26313614 26314043 -59124437 - L1MB3 LINE L1 -18 6165 5730 21 57 0 0 chr17 26315553 26315588 -59122892 + GC_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr17 26315706 26315728 -59122752 + GC_rich Low_complexity Low_complexity 1 22 0 342 0 0 0 chr17 26316040 26316078 -59122402 + (TG)n Simple_repeat Simple_repeat 2 39 0 2223 91 0 3 chr17 26316085 26316381 -59122099 - AluSq SINE Alu -17 296 2 842 196 55 6 chr17 26316507 26316670 -59121810 + MER5B DNA MER1_type 1 171 -7 2279 109 0 3 chr17 26318148 26318451 -59120029 - AluSq SINE Alu -11 302 1 199 333 46 23 chr17 26319215 26319302 -59119178 + MIR SINE MIR 23 111 -97 393 304 245 0 chr17 26319451 26319635 -59118845 + MIR SINE MIR 2 230 -32 183 270 124 22 chr17 26319829 26319918 -59118562 + MIR SINE MIR 77 174 -88 2341 109 0 0 chr17 26319938 26320240 -59118240 + AluSx SINE Alu 1 302 -10 1498 126 146 0 chr17 26320414 26320668 -59117812 + AluJo SINE Alu 3 293 -9 24 32 0 0 chr17 26320668 26320699 -59117781 + AT_rich Low_complexity Low_complexity 1 31 0 183 80 0 0 chr17 26321564 26321589 -59116891 + (T)n Simple_repeat Simple_repeat 1 25 0 21 57 0 0 chr17 26321609 26321644 -59116836 + AT_rich Low_complexity Low_complexity 1 35 0 294 95 0 0 chr17 26321812 26321854 -59116626 + (CA)n Simple_repeat Simple_repeat 1 42 0 403 281 64 25 chr17 26321856 26322091 -59116389 - L1MC4a LINE L1 -1900 5908 5665 309 331 25 32 chr17 26322111 26322268 -59116212 - L1MC4a LINE L1 -437 5684 5529 1723 170 75 0 chr17 26322492 26322774 -59115706 - AluJo SINE Alu -9 303 1 898 136 0 0 chr17 26323135 26323267 -59115213 + FLAM_C SINE Alu 1 132 -1 506 216 239 6 chr17 26323283 26323450 -59115030 - MIR SINE MIR -56 206 1 2047 129 6 28 chr17 26324295 26324613 -59113867 - AluSx SINE Alu -1 311 1 2265 115 0 0 chr17 26324681 26324977 -59113503 - AluSx SINE Alu -16 296 1 556 228 56 71 chr17 26325106 26325303 -59113177 - MIR SINE MIR -47 215 22 202 310 0 0 chr17 26325533 26325591 -59112889 + L2 LINE L2 3254 3311 -2 262 235 0 44 chr17 26326342 26326410 -59112070 - MIR SINE MIR -80 182 118 234 246 215 92 chr17 26326381 26326450 -59112030 - MIR3 SINE MIR -62 146 87 * 1837 52 0 0 chr17 26326450 26326660 -59111820 - AluY SINE Alu -13 298 89 234 246 215 92 chr17 26326660 26326700 -59111780 - MIR3 SINE MIR -121 87 53 2396 183 63 58 chr17 26326700 26327216 -59111264 + MLT2B3 LTR ERVL 1 522 -32 702 48 29 0 chr17 26327216 26327319 -59111161 + (TCCA)n Simple_repeat Simple_repeat 2 107 0 2396 183 63 58 chr17 26327319 26327353 -59111127 + MLT2B3 LTR ERVL 522 554 0 234 246 215 92 chr17 26327353 26327372 -59111108 - MIR3 SINE MIR -155 53 1 25 90 0 0 chr17 26327546 26327613 -59110867 + AT_rich Low_complexity Low_complexity 1 67 0 2247 105 27 0 chr17 26327877 26328173 -59110307 - AluSp SINE Alu -9 304 1 2269 102 3 3 chr17 26328474 26328768 -59109712 - AluSq SINE Alu -19 294 1 742 165 0 0 chr17 26329484 26329617 -59108863 - AluJb SINE Alu -4 308 176 2281 101 0 26 chr17 26331133 26331439 -59107041 + AluSx SINE Alu 1 298 -14 216 0 0 0 chr17 26331997 26332021 -59106459 + (A)n Simple_repeat Simple_repeat 1 24 0 2161 90 0 4 chr17 26332567 26332844 -59105636 + AluSx SINE Alu 5 280 -32 362 20 40 0 chr17 26332844 26332894 -59105586 + (TAAA)n Simple_repeat Simple_repeat 1 52 0 1227 141 0 0 chr17 26332895 26333072 -59105408 + AluSg/x SINE Alu 135 311 -1 247 48 24 24 chr17 26333308 26333350 -59105130 + (GGAA)n Simple_repeat Simple_repeat 1 42 0 266 184 4 0 chr17 26333750 26333807 -59104673 + Alu SINE Alu 1 43 -259 2486 94 0 9 chr17 26333928 26334419 -59104061 - L1M1 LINE L1 -707 5598 5111 5863 113 13 5 chr17 26334429 26335634 -59102846 + L1MA2 LINE L1 4872 6092 -212 1776 164 21 7 chr17 26335634 26335915 -59102565 + AluJo SINE Alu 1 285 -27 5863 113 13 5 chr17 26335915 26335973 -59102507 + L1MA2 LINE L1 6092 6148 -156 2169 110 4 0 chr17 26335973 26336254 -59102226 + AluSp SINE Alu 1 282 -31 403 270 52 17 chr17 26336266 26336381 -59102099 + L2 LINE L2 3195 3313 0 1096 106 0 12 chr17 26337212 26337372 -59101108 - L1MC1 LINE L1 0 6333 6176 214 245 19 0 chr17 26337874 26337927 -59100553 + (TCCA)n Simple_repeat Simple_repeat 1 54 0 195 250 23 0 chr17 26337937 26337981 -59100499 - L2 LINE L2 -11 3261 3217 1277 155 14 83 chr17 26337991 26338268 -59100212 - AluJo SINE Alu -54 258 1 218 140 0 20 chr17 26339264 26339314 -59099166 + (TTTC)n Simple_repeat Simple_repeat 2 50 0 2279 119 0 0 chr17 26339324 26339627 -59098853 - AluSg SINE Alu -7 303 1 189 0 0 0 chr17 26339762 26339783 -59098697 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 347 282 19 0 chr17 26340000 26340103 -59098377 + L1ME LINE L1 5529 5633 -488 2243 108 0 7 chr17 26340297 26340604 -59097876 + AluSg SINE Alu 1 305 -5 845 151 0 0 chr17 26340665 26340791 -59097689 - FLAM_C SINE Alu -7 126 1 495 176 20 20 chr17 26340833 26340935 -59097545 + U13 snRNA snRNA 1 102 -2 192 158 0 0 chr17 26340939 26340977 -59097503 + A-rich Low_complexity Low_complexity 1 38 0 286 277 86 72 chr17 26341524 26341802 -59096678 + L2 LINE L2 1527 1808 -1506 752 124 26 0 chr17 26341828 26341941 -59096539 - AluJb SINE Alu -196 116 1 771 343 119 29 chr17 26341964 26342727 -59095753 + L2 LINE L2 1825 2656 -658 187 328 0 0 chr17 26342816 26342874 -59095606 + MER5A DNA MER1_type 127 184 -5 207 0 0 0 chr17 26343176 26343199 -59095281 + (A)n Simple_repeat Simple_repeat 1 23 0 1136 195 53 38 chr17 26343202 26343459 -59095021 + MER21B LTR ERV1 25 286 -573 2725 80 11 3 chr17 26343459 26343820 -59094660 + THE1B LTR MaLR 1 364 0 2893 72 83 114 chr17 26343827 26344292 -59094188 + THE1B-int LTR MaLR 8 453 -1127 2343 113 0 0 chr17 26344292 26344593 -59093887 + AluSx SINE Alu 1 301 -11 2893 72 83 114 chr17 26344593 26344708 -59093772 + THE1B-int LTR MaLR 453 570 -1010 275 333 114 0 chr17 26344770 26344893 -59093587 - MIR3 SINE MIR -10 198 62 725 212 212 5 chr17 26345311 26345514 -59092966 + MIR SINE MIR 18 262 0 1900 169 0 3 chr17 26345782 26346066 -59092414 + AluJb SINE Alu 1 283 -29 1641 157 39 30 chr17 26346480 26346785 -59091695 + AluJb SINE Alu 1 308 -4 1581 173 54 38 chr17 26346861 26346994 -59091486 + L1MB8 LINE L1 4896 5025 -1121 2165 125 10 0 chr17 26346994 26347298 -59091182 + AluSx SINE Alu 3 309 -3 1581 173 54 38 chr17 26347298 26347591 -59090889 + L1MB8 LINE L1 5025 5329 -817 800 182 94 69 chr17 26347591 26347794 -59090686 + AluJo SINE Alu 82 289 -23 3534 171 77 10 chr17 26347812 26348613 -59089867 + L1MB8 LINE L1 5316 6173 -5 2182 82 0 0 chr17 26348613 26348881 -59089599 - AluSc SINE Alu -41 268 1 364 339 65 12 chr17 26349026 26349194 -59089286 - MER5A DNA MER1_type 0 189 13 594 120 10 0 chr17 26349272 26349372 -59089108 - MER51A LTR ERV1 -65 569 469 659 184 0 57 chr17 26349891 26350032 -59088448 - FLAM_A SINE Alu 0 133 1 294 176 118 0 chr17 26350381 26350449 -59088031 + HY5 scRNA scRNA 1 76 -8 28 29 0 0 chr17 26350449 26350484 -59087996 + AT_rich Low_complexity Low_complexity 1 35 0 577 336 69 30 chr17 26350540 26351078 -59087402 + L2 LINE L2 1498 2056 -1258 1599 183 38 44 chr17 26351142 26351509 -59086971 + MLT1A1 LTR MaLR 1 365 0 422 233 80 7 chr17 26351515 26351665 -59086815 + MER103 DNA DNA 6 166 0 341 243 322 20 chr17 26351942 26352094 -59086386 + MIR SINE MIR 65 262 0 188 377 88 31 chr17 26352095 26352178 -59086302 + L2 LINE L2 2239 2316 -998 1340 208 81 19 chr17 26352178 26352500 -59085980 + MER2 DNA MER2_type 2 343 -1 188 377 88 31 chr17 26352500 26352644 -59085836 + L2 LINE L2 2316 2479 -835 189 333 128 43 chr17 26352741 26352882 -59085598 + L2 LINE L2 2731 2883 -431 279 119 81 12 chr17 26353002 26353162 -59085318 + (TA)n Simple_repeat Simple_repeat 1 171 0 22 35 0 0 chr17 26353162 26353191 -59085289 + AT_rich Low_complexity Low_complexity 1 29 0 230 123 70 23 chr17 26353191 26353362 -59085118 + (TA)n Simple_repeat Simple_repeat 1 179 0 22 35 0 0 chr17 26353362 26353391 -59085089 + AT_rich Low_complexity Low_complexity 1 29 0 415 140 70 23 chr17 26353391 26353562 -59084918 + (TA)n Simple_repeat Simple_repeat 1 179 0 225 218 58 33 chr17 26353582 26354364 -59084116 + (TA)n Simple_repeat Simple_repeat 1 801 0 414 147 0 0 chr17 26354377 26354445 -59084035 - MER2 DNA MER2_type -228 117 50 37 29 0 43 chr17 26354445 26354515 -59083965 + AT_rich Low_complexity Low_complexity 1 67 0 203 302 174 0 chr17 26354790 26354876 -59083604 - L2 LINE L2 -5 3308 3208 200 227 0 0 chr17 26354915 26354959 -59083521 + (TA)n Simple_repeat Simple_repeat 1 44 0 18847 29 3 1 chr17 26355030 26359212 -59079268 + L1PA4 LINE L1 1967 6155 0 579 188 0 0 chr17 26359598 26359715 -59078765 + CT-rich Low_complexity Low_complexity 3 119 0 1605 174 7 24 chr17 26359720 26360007 -59078473 - AluJo SINE Alu -30 282 1 1975 135 7 0 chr17 26360826 26361107 -59077373 + AluSq SINE Alu 3 285 -28 269 159 16 0 chr17 26361114 26361177 -59077303 + (TA)n Simple_repeat Simple_repeat 2 65 0 40 21 0 0 chr17 26361177 26361224 -59077256 + AT_rich Low_complexity Low_complexity 1 47 0 354 278 112 29 chr17 26361224 26361429 -59077051 + MARNA DNA Mariner 27 248 -338 596 256 105 12 chr17 26361669 26361841 -59076639 + MARNA DNA Mariner 286 473 -113 6637 129 5 2 chr17 26361843 26362837 -59075643 + L1P LINE L1 3412 4408 -1738 638 110 0 10 chr17 26362937 26363037 -59075443 - L1 LINE L1 -1839 4307 4209 519 156 0 0 chr17 26363038 26363115 -59075365 + AluY SINE Alu 5 81 -237 1182 54 7 7 chr17 26363115 26363262 -59075218 - AluY SINE Alu -164 147 1 2308 126 0 0 chr17 26363621 26363930 -59074550 - AluSg SINE Alu -1 309 1 249 138 0 46 chr17 26363936 26364001 -59074479 + (TTCTC)n Simple_repeat Simple_repeat 5 66 0 2105 108 10 20 chr17 26364002 26364297 -59074183 - AluSx SINE Alu -20 292 1 230 266 255 0 chr17 26364454 26364548 -59073932 - L2 LINE L2 -5 3267 3150 209 308 46 0 chr17 26364559 26364624 -59073856 + L2 LINE L2 2603 2670 -644 411 156 31 0 chr17 26364673 26364737 -59073743 - LTR8 LTR ERV1 -102 589 524 2418 80 0 0 chr17 26364738 26365038 -59073442 - AluSx SINE Alu -12 300 1 1023 104 0 0 chr17 26365038 26365173 -59073307 - AluSq/x SINE Alu -177 135 1 711 176 75 60 chr17 26365174 26365371 -59073109 - LTR8 LTR ERV1 -150 577 362 265 92 66 0 chr17 26365404 26365480 -59073000 + (TA)n Simple_repeat Simple_repeat 1 81 0 2577 85 67 26 chr17 26365480 26365868 -59072612 - MLT2A1 LTR ERVL -40 404 1 482 127 14 0 chr17 26365868 26365938 -59072542 - LTR8A LTR ERV1 -345 382 312 2945 0 0 0 chr17 26365939 26366250 -59072230 + AluYa5 SINE Alu 1 311 0 2128 120 7 0 chr17 26366263 26366554 -59071926 + AluSx SINE Alu 1 293 -19 1317 97 0 11 chr17 26366597 26366772 -59071708 + AluSg/x SINE Alu 126 298 -14 307 182 18 0 chr17 26366772 26366827 -59071653 - LTR8A LTR ERV1 -407 320 265 213 333 85 16 chr17 26367183 26367312 -59071168 + L3b LINE CR1 1247 1384 -199 2170 121 0 10 chr17 26367648 26367954 -59070526 - AluSg SINE Alu -7 303 1 2464 60 0 0 chr17 26367961 26368262 -59070218 - AluY SINE Alu -10 301 1 1882 164 68 6 chr17 26368400 26368723 -59069757 + MER61A LTR ERV1 1 343 0 1355 148 121 12 chr17 26368828 26369084 -59069396 + AluJo SINE Alu 1 284 -28 5135 123 44 21 chr17 26369127 26369890 -59068590 - L1MB3 LINE L1 -1 6182 5395 1747 168 14 10 chr17 26369890 26370187 -59068293 - AluJo SINE Alu -14 298 1 5135 123 44 21 chr17 26370187 26370278 -59068202 - L1MB3 LINE L1 -788 5395 5308 1935 190 80 35 chr17 26370279 26370745 -59067735 + MLT2B1 LTR ERVL 1 534 -20 384 103 0 0 chr17 26370759 26370817 -59067663 + (TCCC)n Simple_repeat Simple_repeat 3 60 0 315 122 0 189 chr17 26370818 26370892 -59067588 + MLT2D LTR ERVL 357 414 0 3075 195 30 8 chr17 26370921 26371581 -59066899 + MLT-int LTR MaLR 58 742 -629 284 196 18 116 chr17 26371620 26371732 -59066748 + MLT-int LTR MaLR 657 757 -978 1925 250 34 16 chr17 26371824 26372306 -59066174 + MLT1A2-int LTR MaLR 1203 1735 0 1437 210 72 35 chr17 26372306 26372654 -59065826 + MLT1A2 LTR MaLR 1 361 -13 672 163 79 63 chr17 26372659 26372849 -59065631 - L1 LINE L1 -843 5303 5111 2350 97 3 0 chr17 26372888 26373186 -59065294 - AluSx SINE Alu -13 299 1 2046 115 3 3 chr17 26373235 26373543 -59064937 - AluSx SINE Alu 0 309 2 1848 126 77 14 chr17 26374076 26374362 -59064118 - AluSg SINE Alu -6 304 1 2500 62 7 0 chr17 26374824 26375133 -59063347 - AluY SINE Alu 0 311 1 354 217 245 57 chr17 26375794 26375900 -59062580 - FLAM_A SINE Alu -6 127 2 281 287 26 35 chr17 26376553 26376668 -59061812 - MIR SINE MIR -1 261 148 375 254 9 26 chr17 26376761 26376875 -59061605 + HsTC2 DNA Tc2 1778 1889 -9 227 227 61 30 chr17 26377325 26377391 -59061089 - Alu SINE Alu -123 177 134 2109 128 0 3 chr17 26377897 26378202 -59060278 - AluSq SINE Alu -9 304 1 21 0 0 0 chr17 26378413 26378434 -59060046 + AT_rich Low_complexity Low_complexity 1 21 0 2216 97 3 3 chr17 26378510 26378800 -59059680 - AluSx SINE Alu -22 290 1 1836 162 0 46 chr17 26378956 26379283 -59059197 - AluJo SINE Alu 0 312 1 1825 206 65 118 chr17 26379290 26379775 -59058705 - L1ME2 LINE L1 0 6164 5724 1616 160 41 8 chr17 26379775 26380043 -59058437 + AluJo SINE Alu 1 277 -35 1825 206 65 118 chr17 26380043 26380235 -59058245 - L1ME2 LINE L1 -440 5724 5523 2035 106 64 0 chr17 26380334 26380617 -59057863 - AluSg SINE Alu -9 301 1 233 246 33 0 chr17 26380784 26380845 -59057635 - MIR SINE MIR -94 168 106 596 237 90 20 chr17 26380861 26381106 -59057374 - L1MDa LINE L1 -3913 2627 2366 1489 262 70 10 chr17 26381200 26381721 -59056759 - L1ME3 LINE L1 -304 5858 5367 180 225 225 0 chr17 26381997 26382037 -59056443 - MIR SINE MIR -162 100 52 240 189 0 0 chr17 26382778 26382852 -59055628 + (TTAA)n Simple_repeat Simple_repeat 3 76 0 2351 107 3 0 chr17 26383015 26383325 -59055155 - AluSx SINE Alu -1 311 1 347 333 88 78 chr17 26383557 26383957 -59054523 + L2 LINE L2 2867 3270 -2 890 160 8 0 chr17 26384197 26384322 -59054158 - FLAM_C SINE Alu -7 126 1 232 25 75 0 chr17 26384341 26384381 -59054099 + (TTCA)n Simple_repeat Simple_repeat 3 45 0 230 341 124 8 chr17 26384381 26384510 -59053970 - L2 LINE L2 -26 3287 3144 850 174 8 0 chr17 26384661 26384793 -59053687 + FLAM_C SINE Alu 1 133 0 1570 225 132 76 chr17 26385311 26385826 -59052654 - MLT1H1 LTR MaLR 0 555 12 1516 187 3 71 chr17 26386828 26387154 -59051326 - AluJo SINE Alu -8 304 1 2216 81 3 3 chr17 26387298 26387615 -59050865 - AluY SINE Alu 0 317 1 231 222 95 16 chr17 26387660 26387723 -59050757 - MER63 DNA MER1_type -3 1058 991 218 315 27 14 chr17 26387833 26387906 -59050574 - MER5B DNA MER1_type -104 74 1 224 289 340 0 chr17 26388040 26388137 -59050343 + L2 LINE L2 3143 3272 0 208 340 32 21 chr17 26388121 26388215 -59050265 - MIR SINE MIR -148 114 20 * 283 298 46 40 chr17 26388373 26388524 -59049956 - MIR SINE MIR -55 207 56 216 0 0 0 chr17 26389994 26390018 -59048462 + (T)n Simple_repeat Simple_repeat 1 24 0 2486 76 0 0 chr17 26390287 26390591 -59047889 - AluSq SINE Alu -9 304 1 1959 141 0 0 chr17 26391304 26391581 -59046899 + AluSx SINE Alu 18 294 -18 362 286 80 132 chr17 26391766 26391888 -59046592 + L2 LINE L2 2890 3017 -255 1533 179 18 25 chr17 26391888 26392168 -59046312 - AluJo SINE Alu -29 283 6 362 286 80 132 chr17 26392168 26392394 -59046086 + L2 LINE L2 3017 3220 -52 903 87 201 0 chr17 26393162 26393311 -59045169 - MER30 DNA MER1_type 0 230 52 2124 141 0 0 chr17 26393311 26393615 -59044865 - AluSx SINE Alu -8 304 1 34 24 0 0 chr17 26393740 26393781 -59044699 + AT_rich Low_complexity Low_complexity 1 41 0 1708 178 18 0 chr17 26393891 26394172 -59044308 - AluJo SINE Alu -14 298 13 30 45 0 0 chr17 26394264 26394308 -59044172 + AT_rich Low_complexity Low_complexity 1 44 0 186 333 53 0 chr17 26394400 26394475 -59044005 + L2 LINE L2 3142 3220 -52 547 116 32 0 chr17 26394493 26394588 -59043892 - L1MB8 LINE L1 0 6178 6081 1673 206 0 3 chr17 26394612 26394904 -59043576 - AluJb SINE Alu -21 291 1 2303 67 3 0 chr17 26394929 26395234 -59043246 + AluY SINE Alu 1 306 0 318 241 94 33 chr17 26395254 26395421 -59043059 + L1 LINE L1 5150 5338 -824 2079 95 25 7 chr17 26395421 26395704 -59042776 + AluSx SINE Alu 1 288 -24 318 241 94 33 chr17 26395704 26395770 -59042710 + L1 LINE L1 5338 5399 -763 21 36 0 0 chr17 26395773 26395801 -59042679 + AT_rich Low_complexity Low_complexity 1 28 0 2490 58 0 0 chr17 26395856 26396149 -59042331 + AluSq SINE Alu 1 293 -20 21 0 0 0 chr17 26396149 26396170 -59042310 + AT_rich Low_complexity Low_complexity 1 21 0 2402 66 7 7 chr17 26396170 26396474 -59042006 + AluY SINE Alu 1 304 -7 2537 62 7 0 chr17 26396474 26396781 -59041699 + AluY SINE Alu 1 309 -2 249 278 61 40 chr17 26396920 26397118 -59041362 + L1ME4a LINE L1 5690 5891 -230 247 158 0 53 chr17 26397165 26397222 -59041258 + L1ME4a LINE L1 6063 6116 -5 2135 124 0 19 chr17 26397261 26397435 -59041045 - AluSq SINE Alu -5 308 141 2299 104 3 0 chr17 26397435 26397742 -59040738 - AluSc SINE Alu -1 308 1 2135 124 0 19 chr17 26397742 26397881 -59040599 - AluSq SINE Alu -172 141 1 2092 129 0 26 chr17 26398158 26398469 -59040011 - AluSx SINE Alu -9 303 1 1188 156 103 73 chr17 26399610 26399742 -59038738 + MER2 DNA MER2_type 2 129 -216 1574 191 38 3 chr17 26399742 26399910 -59038570 - AluJo SINE Alu -11 301 117 195 42 0 0 chr17 26399910 26399934 -59038546 + (TTA)n Simple_repeat Simple_repeat 2 25 0 1574 191 38 3 chr17 26399934 26400053 -59038427 - AluJo SINE Alu -195 117 4 1188 156 103 73 chr17 26400053 26400221 -59038259 + MER2 DNA MER2_type 129 311 -34 2332 98 0 7 chr17 26400229 26400534 -59037946 - AluY SINE Alu -8 303 1 456 123 284 0 chr17 26400819 26400900 -59037580 + FLAM_C SINE Alu 28 131 -12 1970 82 4 0 chr17 26400931 26401176 -59037304 + AluSp SINE Alu 1 246 -67 24 67 0 0 chr17 26401936 26401981 -59036499 + AT_rich Low_complexity Low_complexity 1 45 0 294 279 271 8 chr17 26402374 26402496 -59035984 - L2 LINE L2 -1 3312 3159 225 94 0 0 chr17 26403232 26403264 -59035216 + (TTTA)n Simple_repeat Simple_repeat 4 35 0 895 128 60 0 chr17 26403269 26403402 -59035078 - FRAM SINE Alu -36 140 1 2155 84 3 7 chr17 26403634 26403919 -59034561 - AluSc SINE Alu -15 294 11 1978 158 0 0 chr17 26404349 26404647 -59033833 - AluJo SINE Alu -14 298 1 227 246 66 0 chr17 26405304 26405365 -59033115 - L1MC4 LINE L1 -13 8029 7965 2241 116 7 3 chr17 26405583 26405886 -59032594 + AluSx SINE Alu 1 304 -8 209 194 0 0 chr17 26406021 26406057 -59032423 - L2 LINE L2 -23 3290 3255 1213 231 126 58 chr17 26406162 26406712 -59031768 - MLT1L LTR MaLR -28 587 1 261 260 117 0 chr17 26406767 26406844 -59031636 + MLT1K LTR MaLR 3 88 -500 836 283 81 29 chr17 26406856 26407164 -59031316 + MLT1K LTR MaLR 265 588 0 21 0 0 0 chr17 26407956 26407977 -59030503 + AT_rich Low_complexity Low_complexity 1 21 0 758 262 191 25 chr17 26408078 26408395 -59030085 - MLT1I LTR MaLR -1 449 28 579 253 111 97 chr17 26408541 26408912 -59029568 - MLT1K LTR MaLR -144 444 69 232 289 105 0 chr17 26409296 26409372 -59029108 - MIR SINE MIR -142 120 37 265 281 146 0 chr17 26409410 26409492 -59028988 + L2 LINE L2 3189 3282 -31 578 253 24 41 chr17 26411148 26411318 -59027162 - MIR SINE MIR -14 248 82 192 40 0 0 chr17 26411450 26411475 -59027005 + (TG)n Simple_repeat Simple_repeat 2 26 0 333 260 13 0 chr17 26411622 26411699 -59026781 - L2 LINE L2 0 3272 3195 618 334 73 69 chr17 26411709 26411823 -59026657 + L2 LINE L2 2665 2777 -536 2457 80 0 0 chr17 26411823 26412124 -59026356 - AluY SINE Alu -10 301 1 618 334 73 69 chr17 26412124 26412663 -59025817 + L2 LINE L2 2777 3313 0 2017 123 23 26 chr17 26413555 26413864 -59024616 - AluSq SINE Alu -5 308 1 1576 170 49 4 chr17 26414139 26414404 -59024076 - AluJo SINE Alu -22 290 14 3997 181 19 13 chr17 26414458 26414640 -59023840 - L1 LINE L1 -3196 4369 4190 2089 122 19 19 chr17 26414640 26414952 -59023528 - AluSx SINE Alu 0 312 1 3997 181 19 13 chr17 26414952 26415667 -59022813 - L1 LINE L1 -3375 4190 3463 1118 116 0 16 chr17 26415667 26415917 -59022563 + (TCCC)n Simple_repeat Simple_repeat 1 423 0 1019 162 5 5 chr17 26415917 26416108 -59022372 - L1 LINE L1 -4068 3497 3307 279 226 9 52 chr17 26416120 26416235 -59022245 + L1MA3 LINE L1 5297 5406 -2402 979 108 0 0 chr17 26416309 26416448 -59022032 + L1MA3 LINE L1 6167 6305 0 520 277 119 10 chr17 26416470 26416773 -59021707 - L1M4 LINE L1 -873 5273 4938 1257 81 121 6 chr17 26417787 26417961 -59020519 + AluY SINE Alu 105 298 -13 36 0 0 0 chr17 26417995 26418031 -59020449 + AT_rich Low_complexity Low_complexity 1 36 0 222 294 247 0 chr17 26418139 26418224 -59020256 + MIR SINE MIR 2 107 -155 609 222 175 36 chr17 26418226 26418478 -59020002 + L2 LINE L2 3025 3311 -2 2344 100 0 16 chr17 26418959 26419270 -59019210 + AluSx SINE Alu 1 306 -6 7775 178 84 35 chr17 26419765 26421413 -59017067 + MER52A LTR ERV1 27 1755 0 357 305 63 58 chr17 26421566 26421740 -59016740 + MER5B DNA MER1_type 3 177 -1 301 280 93 17 chr17 26421886 26422004 -59016476 + MIR SINE MIR 117 243 -19 790 224 137 15 chr17 26422749 26422954 -59015526 - MIR SINE MIR -31 231 2 474 142 19 246 chr17 26423034 26423302 -59015178 + L1ME3A LINE L1 5963 6169 -1 1811 166 3 25 chr17 26423704 26424018 -59014462 - AluJo SINE Alu -5 307 1 616 202 67 67 chr17 26424023 26424156 -59014324 - MER5B DNA MER1_type 0 178 43 2251 110 0 0 chr17 26424156 26424456 -59014024 + AluSx SINE Alu 1 300 -12 616 202 67 67 chr17 26424456 26424500 -59013980 - MER5B DNA MER1_type -134 44 1 2032 118 0 68 chr17 26425237 26425559 -59012921 + AluSx SINE Alu 1 300 -12 209 158 193 0 chr17 26427014 26427071 -59011409 + L2 LINE L2 3246 3313 0 1515 165 158 0 chr17 26427584 26427844 -59010636 - AluJo SINE Alu -1 301 1 2161 116 17 0 chr17 26428025 26428318 -59010162 - AluSx SINE Alu -14 298 1 1328 191 105 50 chr17 26429693 26430121 -59008359 + MER66A LTR ERV1 102 478 0 2518 63 0 0 chr17 26431182 26431485 -59006995 + AluY SINE Alu 1 303 -8 2133 113 0 23 chr17 26431701 26431841 -59006639 + AluSx SINE Alu 1 143 -169 225 0 0 0 chr17 26431841 26431866 -59006614 + (TA)n Simple_repeat Simple_repeat 1 25 0 2133 113 0 23 chr17 26431866 26432035 -59006445 + AluSx SINE Alu 143 303 -9 2486 69 0 0 chr17 26432690 26432993 -59005487 + AluY SINE Alu 3 305 -6 22 0 0 0 chr17 26433089 26433111 -59005369 + AT_rich Low_complexity Low_complexity 1 22 0 2111 98 21 7 chr17 26433299 26433611 -59004869 + AluSq SINE Alu 1 316 0 1163 200 0 37 chr17 26433623 26433868 -59004612 + AluJo SINE Alu 63 298 -14 2075 118 24 0 chr17 26433984 26434273 -59004207 + AluSx SINE Alu 1 296 -16 2286 88 3 0 chr17 26434539 26434834 -59003646 - AluY SINE Alu -15 296 1 272 228 65 33 chr17 26434954 26435046 -59003434 + L1M4 LINE L1 3885 3979 -2167 2173 91 13 10 chr17 26435071 26435369 -59003111 - AluSc SINE Alu -10 299 1 711 253 6 18 chr17 26435626 26435796 -59002684 + MIR SINE MIR 48 215 -47 597 200 22 67 chr17 26435804 26435939 -59002541 + FLAM_A SINE Alu 1 129 -4 23 54 0 0 chr17 26436001 26436038 -59002442 + AT_rich Low_complexity Low_complexity 1 37 0 194 263 88 0 chr17 26436205 26436262 -59002218 - L2 LINE L2 -2 3311 3250 2319 68 4 0 chr17 26436650 26436930 -59001550 + AluSx SINE Alu 1 281 -31 198 0 0 0 chr17 26436933 26436955 -59001525 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 222 299 0 15 chr17 26437067 26437134 -59001346 + T-rich Low_complexity Low_complexity 4 69 0 1883 155 0 10 chr17 26437204 26437507 -59000973 + AluJb SINE Alu 1 300 -12 1097 159 0 0 chr17 26438408 26438571 -58999909 + AluJb SINE Alu 136 298 -14 553 70 233 0 chr17 26438912 26438998 -58999482 - THE1B LTR MaLR -258 106 1 788 21 0 0 chr17 26438998 26439095 -58999385 - THE1B-int LTR MaLR 0 1580 1484 2404 99 56 31 chr17 26439113 26439468 -58999012 - THE1B LTR MaLR 0 364 1 1489 183 62 7 chr17 26439482 26439756 -58998724 - AluJb SINE Alu -23 289 1 1804 175 87 4 chr17 26439756 26440143 -58998337 - L1MB2 LINE L1 -40 6131 5711 305 298 32 0 chr17 26440118 26440212 -58998268 - L1MC/D LINE L1 -1985 5823 5727 * 643 174 159 0 chr17 26440220 26440358 -58998122 - MLT1D LTR MaLR -8 497 338 1866 132 9 150 chr17 26440359 26440576 -58997904 + MLT1B LTR MaLR 1 126 -264 1767 167 36 13 chr17 26440576 26440881 -58997599 + AluJo SINE Alu 1 312 0 1866 132 9 150 chr17 26440881 26441104 -58997376 + MLT1B LTR MaLR 126 379 -11 872 233 27 99 chr17 26441112 26441278 -58997202 - MLT1D LTR MaLR -165 340 164 6343 94 2 66 chr17 26441278 26441822 -58996658 - L1PA13 LINE L1 -4 6159 5582 2289 107 0 3 chr17 26441822 26442122 -58996358 - AluSq SINE Alu -9 304 6 6343 94 2 66 chr17 26442122 26442418 -58996062 - L1PA13 LINE L1 -581 5582 5269 1998 143 31 0 chr17 26442418 26442711 -58995769 - AluSx SINE Alu -10 302 1 6343 94 2 66 chr17 26442711 26442723 -58995757 - L1PA13 LINE L1 -894 5269 5258 2236 120 3 0 chr17 26442723 26443024 -58995456 - AluSx SINE Alu -10 302 1 6343 94 2 66 chr17 26443024 26443339 -58995141 - L1PA13 LINE L1 -905 5258 5019 872 233 27 99 chr17 26443339 26443537 -58994943 - MLT1D LTR MaLR -341 164 2 1955 119 45 0 chr17 26443544 26443830 -58994650 - AluSg SINE Alu -11 299 1 190 306 0 0 chr17 26444319 26444368 -58994112 + L2 LINE L2 3263 3311 -2 969 154 51 133 chr17 26444949 26445183 -58993297 + MER58C DNA MER1_type 1 215 0 618 322 87 17 chr17 26445394 26445683 -58992797 + MLT1L LTR MaLR 215 523 -92 2203 100 3 3 chr17 26446005 26446350 -58992130 + AluSq SINE Alu 1 313 0 951 181 68 0 chr17 26446776 26446953 -58991527 + MER5A DNA MER1_type 1 189 0 2277 112 0 6 chr17 26447801 26448114 -58990366 + AluSx SINE Alu 1 311 -1 1634 170 16 29 chr17 26448807 26449119 -58989361 - AluJb SINE Alu -4 308 1 2128 117 3 3 chr17 26450438 26450737 -58987743 + AluSx SINE Alu 1 299 -13 739 243 231 42 chr17 26452017 26452515 -58985965 + L1MC4a LINE L1 5583 6174 -1634 472 265 108 20 chr17 26453572 26453821 -58984659 + L1ME LINE L1 5347 5617 -504 855 169 0 7 chr17 26454457 26454599 -58983881 + FLAM_C SINE Alu 3 143 0 2102 122 3 0 chr17 26454697 26454991 -58983489 + AluSx SINE Alu 1 295 -17 2144 116 3 0 chr17 26455260 26455554 -58982926 + AluSx SINE Alu 1 295 -17 1949 150 7 0 chr17 26455993 26456280 -58982200 + AluJb SINE Alu 1 289 -23 31 20 0 20 chr17 26456337 26456355 -58982125 + AT_rich Low_complexity Low_complexity 1 18 -30 2311 118 40 40 chr17 26456355 26456729 -58981751 + THE1C LTR MaLR 1 374 -1 31 20 0 20 chr17 26456729 26456759 -58981721 + AT_rich Low_complexity Low_complexity 18 48 0 352 222 56 9 chr17 26456875 26456983 -58981497 + L2 LINE L2 2132 2244 -1070 283 204 0 19 chr17 26457028 26457082 -58981398 - Tigger5 DNA MER2_type -2270 53 1 1271 298 100 39 chr17 26457089 26457842 -58980638 + L2 LINE L2 2259 3054 -218 2255 96 14 0 chr17 26657975 26658266 -58780214 - AluSq SINE Alu -18 295 1 2360 86 0 0 chr17 26658318 26658620 -58779860 - AluSc SINE Alu -7 302 1 1943 127 10 7 chr17 26658799 26659090 -58779390 - AluSx SINE Alu -20 292 1 1078 155 150 0 chr17 26659254 26659441 -58779039 - Tigger3(Golem) DNA MER2_type -16 3013 2799 994 243 47 25 chr17 26660184 26660419 -58778061 + MIR SINE MIR 23 262 0 1176 132 0 16 chr17 26661450 26661632 -58776848 - AluSg/x SINE Alu 0 312 134 1939 148 7 0 chr17 26661632 26661929 -58776551 - AluSx SINE Alu -13 299 1 839 211 41 12 chr17 26662196 26662367 -58776113 + FRAM SINE Alu 1 40 0 725 192 16 0 chr17 26662388 26662513 -58775967 - FLAM_A SINE Alu -8 134 8 1772 121 4 37 chr17 26662682 26662820 -58775660 + AluSx SINE Alu 6 132 -180 2351 78 0 19 chr17 26662820 26663127 -58775353 + AluSp SINE Alu 1 301 -12 1772 121 4 37 chr17 26663127 26663260 -58775220 + AluSx SINE Alu 132 268 -44 1263 134 24 38 chr17 26663735 26663944 -58774536 + AluJo SINE Alu 1 206 -106 26 30 0 0 chr17 26664342 26664375 -58774105 + AT_rich Low_complexity Low_complexity 1 33 0 1746 137 4 4 chr17 26664810 26665072 -58773408 - AluSq SINE Alu -18 295 34 1018 86 0 29 chr17 26665323 26665463 -58773017 + FRAM SINE Alu 29 164 -12 251 186 35 47 chr17 26665508 26665594 -58772886 + MIR SINE MIR 47 131 -77 282 318 32 37 chr17 26665851 26666040 -58772440 + L2 LINE L2 2399 2586 -728 1989 105 79 0 chr17 26666124 26666401 -58772079 - AluSx SINE Alu -13 299 1 1376 191 14 83 chr17 26666401 26666588 -58771892 - L1MB7 LINE L1 -123 6061 5908 1728 154 0 32 chr17 26666588 26666873 -58771607 - AluJb SINE Alu -36 276 1 1376 191 14 83 chr17 26666873 26667036 -58771444 - L1MB7 LINE L1 -276 5908 5735 1286 139 21 106 chr17 26667057 26667290 -58771190 - L1MA9 LINE L1 0 6312 6061 1880 149 14 0 chr17 26667290 26667572 -58770908 - AluSx SINE Alu -26 286 1 1286 139 21 106 chr17 26667572 26667620 -58770860 - L1MA9 LINE L1 -251 6061 6060 1745 154 14 10 chr17 26667620 26667912 -58770568 - AluJo SINE Alu -17 295 3 1286 139 21 106 chr17 26667912 26667960 -58770520 - L1MA9 LINE L1 -252 6060 6010 264 157 98 0 chr17 26668060 26668111 -58770369 + AluYb8 SINE Alu 209 264 -44 208 214 18 0 chr17 26668589 26668645 -58769835 + MER5C DNA MER1_type 261 317 -7 1920 131 27 0 chr17 26668696 26668993 -58769487 - AluSx SINE Alu -7 305 1 1859 144 7 10 chr17 26669034 26669326 -58769154 - AluSx SINE Alu -19 293 3 1929 123 7 7 chr17 26669380 26669656 -58768824 + AluSx SINE Alu 1 276 -36 194 0 39 0 chr17 26669658 26669684 -58768796 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 2411 78 0 0 chr17 26669749 26670042 -58768438 + AluSg SINE Alu 1 293 -17 2073 119 3 29 chr17 26671224 26671397 -58767083 - AluSx SINE Alu -9 303 127 207 0 0 0 chr17 26671397 26671420 -58767060 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2257 100 0 0 chr17 26671420 26671701 -58766779 - AluSc SINE Alu -28 281 1 2073 119 3 29 chr17 26671701 26671837 -58766643 - AluSx SINE Alu -183 129 1 1489 186 31 41 chr17 26671929 26672062 -58766418 + AluJb SINE Alu 1 134 -168 2279 73 3 10 chr17 26672062 26672362 -58766118 + AluY SINE Alu 1 298 -13 1489 186 31 41 chr17 26672362 26672380 -58766100 + AluJb SINE Alu 134 151 -151 2015 138 3 35 chr17 26672380 26672514 -58765966 + AluSx SINE Alu 1 138 -174 2131 115 0 7 chr17 26672514 26672810 -58765670 + AluSq SINE Alu 1 294 -19 2015 138 3 35 chr17 26672810 26672994 -58765486 + AluSx SINE Alu 138 309 -3 1489 186 31 41 chr17 26672994 26673131 -58765349 + AluJb SINE Alu 151 287 -15 1705 158 42 0 chr17 26673151 26673435 -58765045 + AluSx SINE Alu 1 296 -16 258 192 0 0 chr17 26673435 26673487 -58764993 + (TA)n Simple_repeat Simple_repeat 1 52 0 1728 109 83 4 chr17 26673733 26673998 -58764482 + AluSc SINE Alu 1 286 -23 1343 67 0 6 chr17 26674008 26674172 -58764308 + AluY SINE Alu 1 163 -148 1450 212 3 43 chr17 26674275 26674401 -58764079 + AluJo SINE Alu 2 131 -171 2019 118 3 3 chr17 26674401 26674688 -58763792 - AluSg SINE Alu -23 287 1 1450 212 3 43 chr17 26674688 26674863 -58763617 + AluJo SINE Alu 131 291 -11 22 0 0 0 chr17 26674864 26674886 -58763594 + AT_rich Low_complexity Low_complexity 1 22 0 931 215 0 6 chr17 26674889 26675052 -58763428 + FRAM SINE Alu 4 165 -1 535 204 0 19 chr17 26675067 26675170 -58763310 + FRAM SINE Alu 66 166 -10 391 245 119 116 chr17 26675184 26675645 -58762835 + L2 LINE L2 2772 3276 -37 2132 106 0 14 chr17 26675787 26676103 -58762377 + AluSg SINE Alu 1 310 0 2127 96 0 4 chr17 26676140 26676459 -58762021 + AluSc SINE Alu 1 318 0 1629 208 0 0 chr17 26676465 26676759 -58761721 + AluJo SINE Alu 1 294 -18 2013 127 3 20 chr17 26676762 26677061 -58761419 + AluSx SINE Alu 1 294 -18 2100 138 0 0 chr17 26677310 26677614 -58760866 + AluSx SINE Alu 1 304 -8 1649 168 31 11 chr17 26677802 26678088 -58760392 + AluJo SINE Alu 1 292 -20 2174 133 0 0 chr17 26678088 26678389 -58760091 + AluSx SINE Alu 1 301 -11 2384 65 20 0 chr17 26678389 26678682 -58759798 + AluY SINE Alu 1 299 -12 2538 59 0 3 chr17 26679084 26679389 -58759091 + AluY SINE Alu 2 305 -6 554 242 152 17 chr17 26679600 26679778 -58758702 + L2 LINE L2 3112 3313 0 206 221 42 147 chr17 26680470 26680565 -58757915 + L2 LINE L2 3133 3217 -55 25 75 0 0 chr17 26681131 26681184 -58757296 + AT_rich Low_complexity Low_complexity 1 53 0 1889 84 28 4 chr17 26682092 26682341 -58756139 - AluY SINE Alu -55 256 2 1659 158 65 0 chr17 26682371 26682649 -58755831 - AluJb SINE Alu -16 296 1 28 0 0 0 chr17 26683464 26683492 -58754988 + AT_rich Low_complexity Low_complexity 1 28 0 735 209 0 59 chr17 26683688 26683841 -58754639 - FRAM SINE Alu -16 160 17 1223 195 54 64 chr17 26684039 26684337 -58754143 - AluJo SINE Alu -17 295 1 1418 203 51 4 chr17 26684349 26684625 -58753855 - AluJo SINE Alu -23 289 1 2331 88 13 3 chr17 26684638 26684944 -58753536 - AluSc SINE Alu 0 309 1 2127 134 0 0 chr17 26685101 26685392 -58753088 - AluSg SINE Alu -19 291 1 25 0 0 0 chr17 26685478 26685503 -58752977 + AT_rich Low_complexity Low_complexity 1 25 0 1850 104 48 4 chr17 26685659 26685927 -58752553 + AluSg SINE Alu 1 280 -30 2031 218 128 93 chr17 26687198 26687976 -58750504 - L1MC4 LINE L1 -97 7945 7196 198 103 0 0 chr17 26687976 26688005 -58750475 + (TA)n Simple_repeat Simple_repeat 1 29 0 * 261 0 0 0 chr17 26688004 26688033 -58750447 + (GA)n Simple_repeat Simple_repeat 2 30 0 2031 218 128 93 chr17 26688005 26688039 -58750441 - L1MC4 LINE L1 -846 7196 7165 793 197 16 0 chr17 26688039 26688166 -58750314 + AluJo SINE Alu 4 132 -170 2031 218 128 93 chr17 26688166 26688422 -58750058 - L1MC4 LINE L1 -877 7165 6858 2376 91 3 0 chr17 26688422 26688730 -58749750 - AluSp SINE Alu -4 309 1 2031 218 128 93 chr17 26688730 26688832 -58749648 - L1MC4 LINE L1 -1184 6858 6761 945 175 45 7 chr17 26688861 26689015 -58749465 + AluJo SINE Alu 137 296 -6 611 269 130 0 chr17 26689233 26689441 -58749039 + L1MC/D LINE L1 5309 5543 -2265 833 238 88 9 chr17 26689682 26689909 -58748571 + MIR SINE MIR 18 262 0 220 118 29 0 chr17 26690123 26690157 -58748323 - L2 LINE L2 -15 3298 3264 2094 120 3 10 chr17 26690334 26690635 -58747845 + AluSg SINE Alu 1 299 -11 2227 104 0 3 chr17 26691226 26691525 -58746955 - AluSg SINE Alu -12 298 1 715 179 232 21 chr17 26691541 26691731 -58746749 + MIR SINE MIR 30 259 -3 304 302 119 45 chr17 26692533 26692786 -58745694 + L1ME4a LINE L1 5285 5582 -539 1823 157 3 13 chr17 26692786 26693086 -58745394 + AluSx SINE Alu 1 297 -15 304 302 119 45 chr17 26693086 26693265 -58745215 + L1ME4a LINE L1 5582 5746 -375 189 0 0 0 chr17 26693331 26693352 -58745128 + (TA)n Simple_repeat Simple_repeat 2 22 0 249 253 38 13 chr17 26693363 26693442 -58745038 + L1ME4a LINE L1 5989 6069 -52 206 118 0 0 chr17 26693532 26693566 -58744914 + (TTG)n Simple_repeat Simple_repeat 1 34 0 2382 98 0 0 chr17 26693568 26693874 -58744606 - AluSg SINE Alu -4 306 1 2241 84 3 3 chr17 26694262 26694549 -58743931 - AluY SINE Alu -24 287 1 1159 161 43 39 chr17 26694588 26694818 -58743662 - AluJo SINE Alu -81 231 1 555 227 23 16 chr17 26694822 26694950 -58743530 + MER77 LTR ERV1 477 605 0 645 213 0 57 chr17 26695284 26695425 -58743055 - FLAM_A SINE Alu 0 133 1 2224 126 0 0 chr17 26695429 26695738 -58742742 - AluSx SINE Alu -3 309 1 2259 117 0 13 chr17 26695892 26696208 -58742272 - AluSq SINE Alu -1 312 1 2038 148 0 0 chr17 26696278 26696568 -58741912 + AluSx SINE Alu 1 290 -22 803 145 0 30 chr17 26696840 26696971 -58741509 + FLAM_C SINE Alu 1 127 -16 2246 107 0 0 chr17 26697802 26698093 -58740387 + AluSq SINE Alu 9 299 -14 2061 114 31 7 chr17 26699218 26699507 -58738973 - AluSc SINE Alu -13 296 1 2215 80 52 3 chr17 26699545 26699834 -58738646 - AluSg SINE Alu -7 303 1 1417 179 46 36 chr17 26700003 26700305 -58738175 + AluJo SINE Alu 8 312 0 698 228 27 124 chr17 26700637 26700739 -58737741 - MIR SINE MIR 0 262 152 2252 105 0 0 chr17 26700739 26701033 -58737447 - AluSg1 SINE Alu -15 294 1 698 228 27 124 chr17 26701033 26701189 -58737291 - MIR SINE MIR -110 152 29 2324 83 3 0 chr17 26701207 26701496 -58736984 - AluSq SINE Alu -23 290 1 965 83 8 8 chr17 26701499 26701631 -58736849 - AluSq/x SINE Alu -181 132 1 790 97 9 18 chr17 26702215 26702328 -58736152 + AluSq/x SINE Alu 2 113 -199 2286 94 0 7 chr17 26702892 26703201 -58735279 - AluSc SINE Alu -2 307 1 2197 116 0 13 chr17 26703206 26703371 -58735109 - AluSx SINE Alu -14 298 137 1868 133 42 7 chr17 26703371 26703656 -58734824 - AluSc SINE Alu -14 295 1 2197 116 0 13 chr17 26703656 26703792 -58734688 - AluSx SINE Alu -175 137 1 2442 68 3 0 chr17 26703807 26704101 -58734379 - AluY SINE Alu -16 295 1 2161 104 3 7 chr17 26704146 26704433 -58734047 - AluSp SINE Alu -27 286 1 252 316 118 31 chr17 26704509 26704688 -58733792 - MIR SINE MIR -50 212 4 1700 119 78 4 chr17 26705160 26705429 -58733051 + AluJo SINE Alu 1 289 -23 1665 177 21 3 chr17 26706129 26706417 -58732063 - AluJb SINE Alu -17 295 3 473 291 55 65 chr17 26706658 26706801 -58731679 + L1ME LINE L1 5309 5452 -718 1792 170 17 3 chr17 26706801 26707101 -58731379 + AluJo SINE Alu 1 304 -8 473 291 55 65 chr17 26707101 26707359 -58731121 + L1ME LINE L1 5452 5706 -464 2288 91 3 50 chr17 26707484 26707802 -58730678 + AluSp SINE Alu 1 303 -10 616 189 15 61 chr17 26707807 26707939 -58730541 + AluJo/FLAM SINE Alu 2 127 -175 2042 111 3 63 chr17 26707939 26708272 -58730208 + AluSq SINE Alu 1 313 0 1222 102 0 6 chr17 26709011 26709177 -58729303 - AluSg/x SINE Alu -14 298 134 1918 141 37 3 chr17 26709177 26709476 -58729004 - AluSx SINE Alu -3 309 1 1341 159 0 23 chr17 26710061 26710281 -58728199 - AluJo SINE Alu -13 299 85 2227 91 0 24 chr17 26710383 26710680 -58727800 + AluSg SINE Alu 1 290 -20 2061 134 0 0 chr17 26710842 26711149 -58727331 + AluSx SINE Alu 1 307 0 32 35 0 18 chr17 26711247 26711277 -58727203 + AT_rich Low_complexity Low_complexity 1 31 -25 2120 114 0 3 chr17 26711277 26711567 -58726913 + AluSg SINE Alu 1 289 -21 32 35 0 18 chr17 26711567 26711593 -58726887 + AT_rich Low_complexity Low_complexity 31 56 0 1000 178 6 0 chr17 26711651 26711808 -58726672 - FRAM SINE Alu -18 158 1 2108 87 90 0 chr17 26711813 26712090 -58726390 - AluSq SINE Alu -11 302 1 1304 77 71 0 chr17 26712337 26712519 -58725961 + AluY SINE Alu 105 299 -12 746 140 7 60 chr17 26712673 26712823 -58725657 + FLAM_C SINE Alu 2 143 0 189 239 30 45 chr17 26713333 26713400 -58725080 + MIR SINE MIR 122 187 -75 1225 171 9 28 chr17 26713640 26713857 -58724623 + MER20 DNA MER1_type 7 219 0 1072 181 267 7 chr17 26713917 26714205 -58724275 + MLT1A1 LTR MaLR 1 363 -2 607 244 0 0 chr17 26714685 26714804 -58723676 + FLAM_A SINE Alu 5 123 -10 2153 115 0 20 chr17 26714939 26715223 -58723257 + AluSx SINE Alu 2 281 -31 186 71 0 0 chr17 26715223 26715251 -58723229 + (TTAAA)n Simple_repeat Simple_repeat 3 30 0 2153 115 0 20 chr17 26715251 26715271 -58723209 + AluSx SINE Alu 281 300 -12 2324 100 3 0 chr17 26715328 26715629 -58722851 + AluSx SINE Alu 1 302 -10 2358 100 0 3 chr17 26717824 26718123 -58720357 + AluSx SINE Alu 1 298 -14 286 278 22 33 chr17 26718193 26718283 -58720197 + MIR SINE MIR 25 113 -149 2147 96 3 7 chr17 26720998 26721313 -58717167 - AluSx SINE Alu 0 312 2 2139 119 17 0 chr17 26721320 26721622 -58716858 - AluSx SINE Alu -5 307 1 2144 98 9 58 chr17 26721645 26721971 -58716509 - AluSg SINE Alu 0 310 1 1345 147 18 5 chr17 26722092 26722316 -58716164 - AluJo SINE Alu 0 312 86 1841 127 14 4 chr17 26722327 26722603 -58715877 - AluJb SINE Alu -23 289 11 465 274 45 21 chr17 26722605 26722773 -58715707 - L1ME LINE L1 -386 5768 5601 2057 114 26 19 chr17 26723013 26723321 -58715159 + AluSx SINE Alu 3 312 0 764 156 8 0 chr17 26723333 26723461 -58715019 + FLAM_C SINE Alu 5 133 -10 2177 122 3 0 chr17 26723472 26723775 -58714705 + AluSx SINE Alu 1 304 -8 1778 131 7 43 chr17 26723779 26723913 -58714567 + AluSx SINE Alu 1 121 -191 2161 127 0 3 chr17 26723913 26724220 -58714260 + AluSg SINE Alu 1 306 -4 1778 131 7 43 chr17 26724220 26724367 -58714113 + AluSx SINE Alu 121 272 -40 328 318 32 32 chr17 26724677 26724897 -58713583 + L2 LINE L2 2073 2292 -1022 1227 141 117 82 chr17 26725150 26725292 -58713188 - AluJo SINE Alu -11 301 165 2412 87 0 0 chr17 26725292 26725591 -58712889 - AluY SINE Alu -11 300 2 1227 141 117 82 chr17 26725591 26725739 -58712741 - AluJo SINE Alu -147 165 1 909 114 0 0 chr17 26725820 26725943 -58712537 - FLAM_C SINE Alu -8 125 3 2073 131 0 0 chr17 26725953 26726236 -58712244 - AluSx SINE Alu -16 296 14 195 366 30 23 chr17 26726246 26726377 -58712103 + L2 LINE L2 2615 2746 -568 192 303 161 64 chr17 26726412 26726630 -58711850 + L2 LINE L2 2942 3180 -92 2368 80 3 3 chr17 26726638 26726938 -58711542 - AluSc SINE Alu -9 300 1 1859 153 28 0 chr17 26726954 26727241 -58711239 - AluJb SINE Alu -17 295 1 1921 133 7 11 chr17 26727409 26727694 -58710786 + AluJb SINE Alu 9 292 -20 852 101 0 8 chr17 26727706 26727825 -58710655 + L1MA2 LINE L1 6150 6267 -37 2054 136 47 36 chr17 26728030 26728390 -58710090 + THE1B LTR MaLR 1 364 0 2686 146 65 0 chr17 26728759 26729238 -58709242 - L1MA9 LINE L1 -44 6268 5759 422 274 14 85 chr17 26729311 26729419 -58709061 + MIR SINE MIR 55 140 -122 2163 121 3 0 chr17 26729419 26729716 -58708764 + AluSx SINE Alu 1 298 -14 422 274 14 85 chr17 26729716 26729830 -58708650 + MIR SINE MIR 140 261 -1 2234 110 3 7 chr17 26729951 26730250 -58708230 + AluSg SINE Alu 1 298 -12 2036 164 0 0 chr17 26730259 26730557 -58707923 + AluJb SINE Alu 1 298 -14 201 39 0 0 chr17 26730565 26730591 -58707889 + (CAAA)n Simple_repeat Simple_repeat 4 29 0 225 362 17 0 chr17 26730873 26730989 -58707491 - MER5A DNA MER1_type 0 189 72 1576 164 85 14 chr17 26731172 26731453 -58707027 - AluJo SINE Alu -11 301 1 512 165 104 17 chr17 26731484 26731599 -58706881 + FLAM_C SINE Alu 1 125 -8 1954 152 36 0 chr17 26732038 26732340 -58706140 - AluSq SINE Alu 0 313 1 302 153 17 0 chr17 26732695 26732754 -58705726 + MER5A DNA MER1_type 47 106 -83 2488 91 0 0 chr17 26732796 26733105 -58705375 - AluSq SINE Alu -4 309 1 2246 70 21 7 chr17 26733124 26733410 -58705070 - AluSg SINE Alu -20 290 1 1982 158 0 0 chr17 26734177 26734468 -58704012 - AluJo SINE Alu -21 291 1 2100 114 13 29 chr17 26734794 26735109 -58703371 + AluSg SINE Alu 1 310 0 1664 181 33 7 chr17 26735332 26735635 -58702845 + AluJb SINE Alu 1 311 -1 2007 148 3 19 chr17 26735690 26736007 -58702473 + AluSx SINE Alu 1 312 0 2216 121 0 7 chr17 26736039 26736346 -58702134 + AluSg SINE Alu 1 305 -5 2453 81 0 0 chr17 26736346 26736654 -58701826 + AluY SINE Alu 1 308 -3 284 264 239 5 chr17 26736821 26737018 -58701462 - MIR SINE MIR -13 249 7 272 259 94 80 chr17 26737129 26737347 -58701133 + MLT1H LTR MaLR 21 243 -312 207 302 0 0 chr17 26737362 26737415 -58701065 + GA-rich Low_complexity Low_complexity 1 53 0 458 242 83 15 chr17 26737537 26737669 -58700811 + MLT1H LTR MaLR 409 549 0 241 299 197 0 chr17 26737782 26737899 -58700581 - L2 LINE L2 -3 3310 3171 453 282 26 67 chr17 26738070 26738124 -58700356 - MIR SINE MIR -1 261 206 1190 43 25 25 chr17 26738124 26738286 -58700194 - L1PA4 LINE L1 0 6155 5994 453 282 26 67 chr17 26738286 26738426 -58700054 - MIR SINE MIR -56 206 75 2087 136 0 0 chr17 26738492 26738805 -58699675 + AluSx SINE Alu 1 313 0 2246 97 0 10 chr17 26738889 26739188 -58699292 + AluSx SINE Alu 1 296 -16 2254 97 3 7 chr17 26739238 26739536 -58698944 + AluSp SINE Alu 2 298 -15 289 143 0 0 chr17 26739602 26739651 -58698829 - AluSq SINE Alu -1 300 252 2005 107 0 0 chr17 26739751 26740004 -58698476 - AluSq SINE Alu -60 253 1 2040 122 14 10 chr17 26740073 26740367 -58698113 - AluSx SINE Alu -17 295 1 1611 98 0 5 chr17 26740735 26740949 -58697531 - AluSg/x SINE Alu -19 293 81 310 226 88 20 chr17 26741124 26741226 -58697254 + L2 LINE L2 3204 3312 -1 1712 159 3 52 chr17 26741657 26741751 -58696729 + AluJo SINE Alu 1 98 -214 1899 94 8 122 chr17 26741751 26742103 -58696377 + AluSq SINE Alu 1 312 -1 1712 159 3 52 chr17 26742103 26742317 -58696163 + AluJo SINE Alu 98 294 -18 1814 159 40 3 chr17 26742319 26742620 -58695860 + AluJb SINE Alu 1 312 0 2982 132 73 2 chr17 26742631 26743176 -58695304 + L1MB7 LINE L1 5585 6168 -16 707 153 14 62 chr17 26743195 26743339 -58695141 + FLAM_C SINE Alu 7 143 0 22 0 0 0 chr17 26744308 26744330 -58694150 + AT_rich Low_complexity Low_complexity 1 22 0 2274 76 3 10 chr17 26744333 26744623 -58693857 + AluSg SINE Alu 1 288 -22 215 157 20 0 chr17 26744628 26744679 -58693801 + (TA)n Simple_repeat Simple_repeat 1 52 0 194 219 0 0 chr17 26746247 26746288 -58692192 - MIR SINE MIR -114 148 108 1537 100 131 4 chr17 26746294 26746419 -58692061 + AluJb SINE Alu 1 109 -203 333 68 0 0 chr17 26746419 26746463 -58692017 + (CTA)n Simple_repeat Simple_repeat 1 44 0 1537 100 131 4 chr17 26746463 26746597 -58691883 + AluJb SINE Alu 109 293 -19 30 0 0 0 chr17 26746600 26746630 -58691850 + AT_rich Low_complexity Low_complexity 1 30 0 2174 88 14 3 chr17 26746739 26747036 -58691444 + AluSq SINE Alu 1 300 -13 1179 156 37 28 chr17 26747250 26747468 -58691012 + AluJo SINE Alu 1 220 -92 249 179 0 0 chr17 26747468 26747507 -58690973 + Alu SINE Alu 86 124 -178 186 43 0 0 chr17 26747510 26747533 -58690947 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 2309 105 0 13 chr17 26748107 26748420 -58690060 + AluSg SINE Alu 1 309 -1 984 352 3 99 chr17 26748490 26748814 -58689666 - AluJb SINE Alu -9 293 1 1489 101 223 8 chr17 26748973 26749235 -58689245 + AluSq SINE Alu 1 313 0 2049 133 17 0 chr17 26749237 26749539 -58688941 + AluSx SINE Alu 1 307 -5 762 152 152 13 chr17 26749540 26749691 -58688789 + AluSq SINE Alu 137 308 -5 419 284 0 17 chr17 26751310 26751426 -58687054 + L3 LINE CR1 1444 1557 -20 213 328 107 33 chr17 26751929 26752051 -58686429 + L2 LINE L2 3137 3267 -5 2154 119 0 3 chr17 26752633 26752954 -58685526 - AluSq SINE Alu 0 320 1 238 280 32 54 chr17 26753940 26754033 -58684447 + MARNA DNA Mariner 414 504 -82 1213 173 27 4 chr17 26754123 26754348 -58684132 - AluJo SINE Alu -11 301 72 369 224 0 0 chr17 26754457 26754524 -58683956 - AluJo SINE Alu -235 67 1 2238 104 3 0 chr17 26754780 26755068 -58683412 + AluSp SINE Alu 1 289 -24 22 0 0 0 chr17 26755068 26755090 -58683390 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr17 26755118 26755140 -58683340 + AT_rich Low_complexity Low_complexity 1 22 0 2338 97 10 0 chr17 26755212 26755510 -58682970 + AluSg SINE Alu 1 301 -9 1595 139 24 98 chr17 26755563 26755973 -58682507 + MER58D DNA MER1_type 1 380 -6 2159 124 3 10 chr17 26756584 26756898 -58681582 + AluSq SINE Alu 1 312 -1 2293 94 7 3 chr17 26757068 26757366 -58681114 + AluSq SINE Alu 1 299 -14 2147 115 0 0 chr17 26757371 26757666 -58680814 + AluY SINE Alu 1 295 -16 2101 128 17 0 chr17 26757666 26757961 -58680519 + AluSq SINE Alu 1 301 -12 1285 154 5 0 chr17 26757769 26757970 -58680510 + AluSq SINE Alu 109 310 -3 858 81 36 0 chr17 26757988 26758103 -58680377 + AluY SINE Alu 177 292 -19 5441 48 39 6 chr17 26758104 26759163 -58679317 + SVA Other Other 5 1386 0 2147 127 10 0 chr17 26759252 26759552 -58678928 - AluSx SINE Alu -9 303 1 2257 76 3 13 chr17 26760462 26760764 -58677716 + AluSp SINE Alu 1 299 -14 811 161 0 0 chr17 26760871 26761001 -58677479 - FLAM_A SINE Alu 0 133 4 211 250 3 28 chr17 26762190 26762262 -58676218 + MIR SINE MIR 97 170 -38 213 235 0 37 chr17 26762867 26762948 -58675532 + (CCG)n Simple_repeat Simple_repeat 1 78 0 213 250 0 0 chr17 26763121 26763181 -58675299 + GA-rich Low_complexity Low_complexity 2 61 0 2314 59 0 10 chr17 26763666 26763969 -58674511 - AluSg SINE Alu -4 306 7 393 210 174 14 chr17 26764212 26764350 -58674130 + L2 LINE L2 2868 3027 -286 212 188 16 78 chr17 26764369 26764433 -58674047 + L2 LINE L2 3192 3251 -62 1703 156 7 4 chr17 26764435 26764710 -58673770 - AluJo SINE Alu -12 300 25 229 188 203 0 chr17 26764729 26764798 -58673682 + L2 LINE L2 3227 3309 -4 464 307 38 9 chr17 26764798 26765010 -58673470 + L2 LINE L2 2437 2654 -660 228 310 57 32 chr17 26765217 26765375 -58673105 + L2 LINE L2 2988 3149 -164 2133 110 7 7 chr17 26765428 26765737 -58672743 + AluSx SINE Alu 1 309 -3 820 169 0 0 chr17 26766332 26766456 -58672024 + FRAM SINE Alu 6 129 -47 922 70 0 0 chr17 26766468 26766583 -58671897 - AluSc SINE Alu -15 294 180 669 73 0 0 chr17 26766686 26766782 -58671698 - L1MA9 LINE L1 -370 5942 5847 670 79 11 0 chr17 26766811 26766900 -58671580 + AluSp SINE Alu 1 90 -223 2664 32 0 0 chr17 26766900 26767210 -58671270 + AluY SINE Alu 1 310 -1 1488 146 9 0 chr17 26767208 26767441 -58671039 + AluSp SINE Alu 75 309 -4 * 323 329 116 19 chr17 26767620 26767775 -58670705 + MIR SINE MIR 64 233 -29 1123 229 71 68 chr17 26767816 26768019 -58670461 - MLT1B LTR MaLR -8 382 176 1970 147 0 6 chr17 26768019 26768331 -58670149 - AluJb SINE Alu -2 310 1 1123 229 71 68 chr17 26768331 26768507 -58669973 - MLT1B LTR MaLR -214 176 2 2019 132 0 28 chr17 26768560 26768879 -58669601 - AluSx SINE Alu -2 310 1 2040 119 0 32 chr17 26768879 26769189 -58669291 - AluSx SINE Alu -12 300 1 1692 174 32 0 chr17 26769651 26769932 -58668548 + AluJo SINE Alu 7 296 -16 1641 183 58 56 chr17 26769932 26770299 -58668181 + MLT1C LTR MaLR 35 405 -62 1867 162 0 7 chr17 26770299 26770602 -58667878 + AluJb SINE Alu 9 309 -3 1641 183 58 56 chr17 26770602 26770666 -58667814 + MLT1C LTR MaLR 405 467 0 410 340 73 5 chr17 26770837 26771028 -58667452 - MIR SINE MIR -36 226 23 1950 141 0 10 chr17 26771240 26771537 -58666943 - AluJb SINE Alu 0 312 19 233 273 114 30 chr17 26772053 26772185 -58666295 + MIR SINE MIR 29 171 -91 482 251 114 119 chr17 26772253 26772707 -58665773 + L2 LINE L2 2379 2834 -479 1903 157 0 3 chr17 26772707 26773006 -58665474 + AluJb SINE Alu 1 298 -14 482 251 114 119 chr17 26773006 26773341 -58665139 + L2 LINE L2 2834 3308 -5 1739 182 14 0 chr17 26773364 26773655 -58664825 + AluJo SINE Alu 1 295 -17 237 321 92 42 chr17 26773733 26773973 -58664507 + L2 LINE L2 2624 2875 -439 745 263 127 20 chr17 26774289 26774712 -58663768 - L2 LINE L2 -209 3104 2648 187 309 141 0 chr17 26775084 26775233 -58663247 + L2 LINE L2 2887 3056 -216 627 250 30 63 chr17 26775660 26775805 -58662675 - L2 LINE L2 -8 3305 3157 1756 142 51 7 chr17 26775805 26776100 -58662380 - AluJo SINE Alu -4 308 1 2321 106 0 0 chr17 26776107 26776419 -58662061 - AluSx SINE Alu 0 312 1 627 250 30 63 chr17 26776419 26776714 -58661766 - L2 LINE L2 -162 3151 2796 788 208 153 0 chr17 26776800 26776983 -58661497 + MER58C DNA MER1_type 4 214 -1 1911 130 3 19 chr17 26776989 26777296 -58661184 - AluJb SINE Alu -6 306 5 584 254 32 32 chr17 26777329 26777518 -58660962 + MER20 DNA MER1_type 11 199 -20 1634 185 10 10 chr17 26777790 26778092 -58660388 - AluJo SINE Alu -8 304 3 453 353 111 21 chr17 26778099 26778476 -58660004 - L2 LINE L2 -16 3297 2887 2181 118 0 10 chr17 26778611 26778924 -58659556 - AluSx SINE Alu -2 310 1 192 343 120 0 chr17 26778960 26779068 -58659412 + L2 LINE L2 3150 3270 -2 351 165 0 0 chr17 26780983 26781068 -58657412 + GA-rich Low_complexity Low_complexity 2 86 0 27 0 0 0 chr17 26781808 26781835 -58656645 + GC_rich Low_complexity Low_complexity 1 27 0 267 79 0 0 chr17 26782458 26782496 -58655984 + (A)n Simple_repeat Simple_repeat 1 38 0 21 89 0 0 chr17 26782615 26782671 -58655809 + GC_rich Low_complexity Low_complexity 1 56 0 35 63 0 0 chr17 26782775 26782838 -58655642 + GC_rich Low_complexity Low_complexity 1 63 0 28 86 0 0 chr17 26782944 26783014 -58655466 + GC_rich Low_complexity Low_complexity 1 70 0 285 51 0 0 chr17 26786868 26786907 -58651573 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 665 71 0 0 chr17 26786910 26786994 -58651486 - AluSx SINE Alu -35 274 191 1072 96 0 0 chr17 26786995 26787131 -58651349 - AluSx SINE Alu -172 141 6 532 128 0 0 chr17 26787137 26787215 -58651265 - AluJo SINE Alu -16 296 219 833 177 21 0 chr17 26787220 26787361 -58651119 - AluJo SINE Alu -155 157 14 1881 131 0 44 chr17 26787505 26787843 -58650637 - AluSx SINE Alu 0 325 1 2286 99 3 0 chr17 26787851 26788163 -58650317 - AluSp SINE Alu 0 313 1 190 261 297 24 chr17 26788168 26788333 -58650147 - L2 LINE L2 -774 2540 2331 244 306 56 0 chr17 26788400 26788472 -58650008 - MIR SINE MIR -70 192 117 2089 107 7 0 chr17 26788510 26788801 -58649679 + AluSx SINE Alu 1 293 -19 1665 160 15 0 chr17 26788885 26789154 -58649326 - AluJb SINE Alu -39 273 1 250 351 60 0 chr17 26789168 26789302 -58649178 - L2 LINE L2 -481 2833 2692 1177 178 111 41 chr17 26789306 26789576 -58648904 + 7SLRNA srpRNA srpRNA 1 289 -31 2313 76 0 0 chr17 26789684 26790014 -58648466 + AluY SINE Alu 1 311 0 2055 181 52 69 chr17 26790026 26790061 -58648419 + L1MB5 LINE L1 5587 5621 -553 1988 133 0 17 chr17 26790061 26790362 -58648118 + AluJo SINE Alu 1 296 -16 2055 181 52 69 chr17 26790362 26790922 -58647558 + L1MB5 LINE L1 5621 6172 -2 2075 86 7 21 chr17 26790936 26791073 -58647407 + AluSg SINE Alu 8 145 -165 8174 52 1 0 chr17 26791073 26792041 -58646439 + LTR5 LTR ERVK 1 969 0 2075 86 7 21 chr17 26792041 26792194 -58646286 + AluSg SINE Alu 145 294 -16 1871 141 23 3 chr17 26792201 26792505 -58645975 + AluSx SINE Alu 1 310 -2 207 139 0 0 chr17 26792505 26792541 -58645939 + (GGAA)n Simple_repeat Simple_repeat 1 36 0 856 174 0 7 chr17 26792555 26792699 -58645781 + FRAM SINE Alu 12 154 -22 32 26 0 0 chr17 26792699 26792738 -58645742 + AT_rich Low_complexity Low_complexity 1 39 0 1003 87 0 0 chr17 26792745 26792872 -58645608 + FLAM_C SINE Alu 2 128 -5 231 361 98 30 chr17 26792887 26793020 -58645460 - L2 LINE L2 -662 2652 2511 2536 55 0 0 chr17 26793096 26793407 -58645073 + AluY SINE Alu 1 311 0 1299 122 0 0 chr17 26793413 26793594 -58644886 + AluSg/x SINE Alu 120 300 -10 302 73 0 0 chr17 26793674 26793715 -58644765 - FLAM SINE Alu -22 111 71 535 244 108 17 chr17 26793715 26793891 -58644589 + L2 LINE L2 3121 3312 -1 456 290 24 0 chr17 26795294 26795418 -58643062 - Charlie8 DNA MER1_type -2202 215 89 1212 273 31 3 chr17 26795428 26795787 -58642693 + L1ME3 LINE L1 5589 5957 -205 710 197 165 0 chr17 26795805 26795993 -58642487 - MER20 DNA MER1_type 0 219 1 2210 109 0 7 chr17 26795995 26796299 -58642181 + AluSx SINE Alu 3 304 -8 345 297 17 8 chr17 26796336 26796469 -58642011 + L1ME3 LINE L1 6003 6137 -25 1430 166 25 0 chr17 26796481 26796765 -58641715 + L1MB7 LINE L1 5840 6130 -54 2058 142 0 0 chr17 26796776 26797078 -58641402 + AluSx SINE Alu 1 302 -10 1695 150 10 42 chr17 26797093 26797219 -58641261 + AluJo SINE Alu 1 129 -183 2373 84 0 0 chr17 26797219 26797515 -58640965 - AluSx SINE Alu -15 297 2 1695 150 10 42 chr17 26797515 26797701 -58640779 + AluJo SINE Alu 129 303 -9 35 41 0 0 chr17 26797740 26797789 -58640691 + AT_rich Low_complexity Low_complexity 1 49 0 2135 121 3 0 chr17 26798420 26798727 -58639753 + AluSx SINE Alu 1 308 -4 2134 98 3 3 chr17 26798764 26799059 -58639421 + AluSx SINE Alu 1 295 -17 1309 122 6 0 chr17 26799065 26799246 -58639234 - AluJo SINE Alu -130 182 1 1801 174 13 19 chr17 26799248 26799622 -58638858 - Tigger2a DNA MER2_type -62 372 1 2254 115 0 0 chr17 26799630 26799935 -58638545 - AluSx SINE Alu -7 305 1 540 123 0 0 chr17 26799938 26800019 -58638461 - MLT1A1 LTR MaLR -61 304 224 1631 115 0 0 chr17 26800019 26800237 -58638243 - AluSx SINE Alu -94 218 1 1866 152 3 19 chr17 26800244 26800425 -58638055 - AluJb SINE Alu -1 311 136 2221 104 0 3 chr17 26800425 26800722 -58637758 - AluSc SINE Alu -13 296 1 1866 152 3 19 chr17 26800722 26800856 -58637624 - AluJb SINE Alu -176 136 1 3713 137 0 33 chr17 26800866 26801067 -58637413 - L1PA15 LINE L1 -2 6163 5957 2197 124 0 0 chr17 26801067 26801373 -58637107 - AluSx SINE Alu -6 306 1 3713 137 0 33 chr17 26801373 26801525 -58636955 - L1PA15 LINE L1 -208 5957 5802 2059 124 7 3 chr17 26801525 26801824 -58636656 - AluSx SINE Alu -12 300 1 3713 137 0 33 chr17 26801824 26802077 -58636403 - L1PA15 LINE L1 -363 5802 5576 466 195 220 0 chr17 26802087 26802205 -58636275 - MLT1A1 LTR MaLR -220 145 2 585 226 67 38 chr17 26802206 26802574 -58635906 + MLT1C LTR MaLR 69 467 0 1745 133 63 11 chr17 26802708 26802994 -58635486 - AluJo SINE Alu -9 303 3 2314 101 3 0 chr17 26803265 26803571 -58634909 - AluSx SINE Alu -3 309 3 291 213 0 175 chr17 26803582 26803630 -58634850 - Charlie8 DNA MER1_type -184 157 102 1870 112 3 24 chr17 26803630 26803948 -58634532 + AluSx SINE Alu 1 312 0 291 213 0 175 chr17 26803948 26803979 -58634501 - Charlie8 DNA MER1_type -239 102 67 2331 53 0 0 chr17 26803979 26804308 -58634172 + AluY SINE Alu 1 329 0 291 213 0 175 chr17 26804308 26804386 -58634094 - Charlie8 DNA MER1_type -274 67 26 239 260 151 0 chr17 26804885 26804958 -58633522 - L2 LINE L2 -26 3246 3163 360 88 0 0 chr17 26805501 26805558 -58632922 + (TG)n Simple_repeat Simple_repeat 2 58 0 2270 113 0 0 chr17 26805672 26805981 -58632499 - AluSx SINE Alu -3 309 1 305 324 39 45 chr17 26806011 26806190 -58632290 - L2 LINE L2 -17 3296 3119 1763 174 0 10 chr17 26806234 26806532 -58631948 + AluJo SINE Alu 1 295 -17 1951 145 10 0 chr17 26806532 26806828 -58631652 + AluSx SINE Alu 1 299 -13 378 107 0 0 chr17 26806828 26806884 -58631596 + (GGGGA)n Simple_repeat Simple_repeat 1 56 0 238 307 40 0 chr17 26806907 26806982 -58631498 - L2 LINE L2 -610 2704 2627 2050 132 3 3 chr17 26807175 26807478 -58631002 - AluSx SINE Alu -9 303 1 634 172 50 89 chr17 26807528 26807661 -58630819 - MLT1A1 LTR MaLR -192 173 47 1879 167 0 13 chr17 26807661 26807973 -58630507 + AluSq SINE Alu 1 308 -5 634 172 50 89 chr17 26807973 26808019 -58630461 - MLT1A1 LTR MaLR -318 47 1 1069 253 80 50 chr17 26808068 26808242 -58630238 + MLT1D LTR MaLR 1 168 -337 1903 154 29 16 chr17 26808242 26808548 -58629932 + AluSx SINE Alu 1 310 -2 1069 253 80 50 chr17 26808548 26808578 -58629902 + MLT1D LTR MaLR 168 196 -309 1993 141 0 20 chr17 26808578 26808883 -58629597 + AluJb SINE Alu 13 311 -1 1069 253 80 50 chr17 26808883 26809116 -58629364 + MLT1D LTR MaLR 196 452 -53 243 224 0 35 chr17 26809170 26809228 -58629252 + MLT1D LTR MaLR 404 459 -8 414 184 13 0 chr17 26809234 26809310 -58629170 - MER2 DNA MER2_type -1 344 268 2052 125 0 10 chr17 26809316 26809604 -58628876 + AluSx SINE Alu 27 311 -1 1503 192 4 15 chr17 26809630 26809901 -58628579 + AluJo SINE Alu 13 280 -32 180 0 0 0 chr17 26809901 26809921 -58628559 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 37 32 0 16 chr17 26809924 26809959 -58628521 + AT_rich Low_complexity Low_complexity 1 35 -26 2416 68 3 46 chr17 26809959 26810149 -58628331 - AluY SINE Alu -1 310 138 2244 100 23 3 chr17 26810149 26810323 -58628157 - AluSc SINE Alu -2 307 123 189 0 0 0 chr17 26810323 26810344 -58628136 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 2244 100 23 3 chr17 26810344 26810470 -58628010 - AluSc SINE Alu -186 123 1 2416 68 3 46 chr17 26810470 26810603 -58627877 - AluY SINE Alu -173 138 1 37 32 0 16 chr17 26810603 26810629 -58627851 + AT_rich Low_complexity Low_complexity 35 61 0 22 0 0 0 chr17 26810710 26810732 -58627748 + AT_rich Low_complexity Low_complexity 1 22 0 1501 129 0 9 chr17 26810732 26810942 -58627538 + AluSx SINE Alu 49 256 -56 320 174 0 14 chr17 26810947 26811016 -58627464 + (TA)n Simple_repeat Simple_repeat 1 68 0 696 180 16 0 chr17 26811016 26811144 -58627336 - MER2 DNA MER2_type -214 131 2 252 322 76 0 chr17 26811152 26811270 -58627210 + L2 LINE L2 1758 1884 -1430 273 290 47 0 chr17 26811296 26811403 -58627077 + L2 LINE L2 2013 2124 -1190 457 174 0 0 chr17 26811413 26811499 -58626981 + AluS SINE Alu 226 311 0 2265 110 3 0 chr17 26811501 26811811 -58626669 + AluY SINE Alu 1 311 0 2108 76 80 0 chr17 26811825 26812113 -58626367 + AluSq SINE Alu 1 309 0 303 157 5 78 chr17 26812264 26812455 -58626025 + CT-rich Low_complexity Low_complexity 1 177 0 323 246 12 18 chr17 26812508 26812679 -58625801 + C-rich Low_complexity Low_complexity 1 170 0 1541 189 57 79 chr17 26812721 26812842 -58625638 + MLT1C LTR MaLR 8 130 -337 1721 174 3 61 chr17 26812842 26812976 -58625504 + AluJb SINE Alu 1 141 -171 2374 62 0 59 chr17 26812976 26813283 -58625197 - AluY SINE Alu -20 291 3 2058 152 3 0 chr17 26813285 26813588 -58624892 - AluSx SINE Alu -8 304 1 1721 174 3 61 chr17 26813588 26813778 -58624702 + AluJb SINE Alu 142 309 -3 1541 189 57 79 chr17 26813778 26814126 -58624354 + MLT1C LTR MaLR 130 467 0 842 295 134 8 chr17 26814127 26814493 -58623987 - LTR16C LTR ERVL -9 482 71 874 245 166 59 chr17 26814512 26814693 -58623787 + MLT1E LTR MaLR 1 161 -432 2071 125 17 0 chr17 26814693 26814980 -58623500 - AluSg SINE Alu -18 292 1 874 245 166 59 chr17 26814980 26815190 -58623290 + MLT1E LTR MaLR 161 434 -159 288 0 0 0 chr17 26815247 26815279 -58623201 + (TTAA)n Simple_repeat Simple_repeat 1 32 0 1061 147 0 7 chr17 26815285 26815435 -58623045 - AluJo/FRAM SINE Alu -30 282 134 2087 153 3 0 chr17 26815435 26815736 -58622744 - AluSx SINE Alu -4 308 7 1792 139 28 6 chr17 26815746 26816070 -58622410 - L1MA8 LINE L1 -3 6288 5958 1874 174 0 0 chr17 26816070 26816363 -58622117 - AluJb SINE Alu -9 303 11 1904 97 0 0 chr17 26816365 26816602 -58621878 - AluSg SINE Alu -71 239 3 422 331 12 0 chr17 26816632 26816792 -58621688 + L2 LINE L2 2466 2627 -687 1470 196 82 11 chr17 26816841 26817009 -58621471 - AluJo SINE Alu -11 301 104 2060 125 7 14 chr17 26817009 26817306 -58621174 - AluSx SINE Alu -17 295 1 1470 196 82 11 chr17 26817306 26817418 -58621062 - AluJo SINE Alu -208 104 1 483 323 79 16 chr17 26817473 26817662 -58620818 - MIR SINE MIR -7 255 55 1976 145 0 42 chr17 26817667 26817832 -58620648 - AluSx SINE Alu -15 297 127 183 100 0 0 chr17 26817832 26817862 -58620618 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 2203 93 0 4 chr17 26817866 26818145 -58620335 - AluSp SINE Alu -35 278 1 2053 91 4 8 chr17 26818145 26818408 -58620072 - AluSc SINE Alu -9 300 38 1976 145 0 42 chr17 26818408 26818546 -58619934 - AluSx SINE Alu -186 126 1 2457 90 3 0 chr17 26818729 26819040 -58619440 + AluSp SINE Alu 2 313 0 1035 207 28 0 chr17 26819486 26819699 -58618781 + MER20 DNA MER1_type 1 219 0 203 361 0 12 chr17 26820113 26820196 -58618284 - MIR SINE MIR -89 173 92 993 125 13 13 chr17 26820289 26820441 -58618039 + AluSx SINE Alu 2 153 -159 1633 132 58 0 chr17 26820563 26820806 -58617674 + AluSq SINE Alu 1 257 -56 677 75 0 21 chr17 26820811 26820905 -58617575 - AluS SINE Alu -220 93 2 698 185 0 15 chr17 26820963 26821098 -58617382 - FLAM_A SINE Alu 0 133 1 624 250 21 0 chr17 26821101 26821245 -58617235 - MIR SINE MIR -98 164 18 2173 116 17 3 chr17 26821311 26821603 -58616877 + AluSx SINE Alu 1 296 -16 2708 48 0 0 chr17 26821603 26821914 -58616566 + AluY SINE Alu 1 311 0 2247 88 51 0 chr17 26821915 26822210 -58616270 + AluSx SINE Alu 1 310 -2 220 319 11 11 chr17 26822211 26822302 -58616178 - L2 LINE L2 -317 2955 2865 417 300 75 12 chr17 26822341 26822501 -58615979 - MIR SINE MIR -59 203 34 281 344 0 48 chr17 26823628 26823817 -58614663 + C-rich Low_complexity Low_complexity 1 180 0 * 326 243 7 57 chr17 26823781 26823921 -58614559 + CT-rich Low_complexity Low_complexity 3 135 0 247 316 7 37 chr17 26824522 26824658 -58613822 + CT-rich Low_complexity Low_complexity 4 135 0 367 185 49 12 chr17 26825204 26825285 -58613195 + MIR SINE MIR 70 153 -109 490 122 11 0 chr17 26825298 26825388 -58613092 + FLAM_A SINE Alu 42 132 -10 2166 113 6 26 chr17 26825415 26825726 -58612754 + AluSx SINE Alu 1 305 -7 508 147 0 0 chr17 26825835 26825910 -58612570 - AluS SINE Alu -237 76 2 249 284 45 0 chr17 26825933 26826000 -58612480 + L2 LINE L2 3244 3313 0 1290 180 124 8 chr17 26826082 26826332 -58612148 + AluJo SINE Alu 2 280 -32 1463 231 117 5 chr17 26826333 26826778 -58611702 + L1ME3 LINE L1 5644 6138 -24 808 154 0 22 chr17 26826804 26826940 -58611540 + FLAM_A SINE Alu 1 133 0 2002 138 0 46 chr17 26826943 26827088 -58611392 + AluSx SINE Alu 1 151 -161 2177 103 21 3 chr17 26827088 26827378 -58611102 + AluSg SINE Alu 1 295 -15 2002 138 0 46 chr17 26827378 26827559 -58610921 + AluSx SINE Alu 151 312 0 1876 176 0 26 chr17 26827563 26827875 -58610605 + AluJo SINE Alu 2 305 -7 401 304 24 8 chr17 26828648 26828773 -58609707 + MIR SINE MIR 123 249 -13 2179 120 23 19 chr17 26828776 26828948 -58609532 - AluSq SINE Alu -3 310 135 2625 64 0 0 chr17 26828948 26829259 -58609221 - AluY SINE Alu 0 311 1 2179 120 23 19 chr17 26829259 26829394 -58609086 - AluSq SINE Alu -178 135 2 673 144 0 32 chr17 26829426 26829551 -58608929 + FLAM_C SINE Alu 23 143 0 266 271 43 0 chr17 26829554 26829624 -58608856 - MIR SINE MIR -72 190 118 2443 72 0 3 chr17 26829891 26830184 -58608296 - AluY SINE Alu -19 292 1 2163 128 28 75 chr17 26830272 26830449 -58608031 + MSTA LTR MaLR 1 185 -243 2185 134 0 7 chr17 26830449 26830755 -58607725 - AluSx SINE Alu -8 304 1 2163 128 28 75 chr17 26830755 26830971 -58607509 + MSTA LTR MaLR 185 377 -51 2278 106 0 0 chr17 26830971 26831291 -58607189 + AluSx SINE Alu 1 320 0 2163 128 28 75 chr17 26831291 26831322 -58607158 + MSTA LTR MaLR 377 408 -20 510 221 0 33 chr17 26831492 26831614 -58606866 - LTR16C LTR ERVL 0 491 374 399 247 34 62 chr17 26831614 26831713 -58606767 + MLT1G1 LTR MaLR 3 98 -497 2049 128 152 11 chr17 26831713 26832088 -58606392 - MSTA LTR MaLR 0 428 1 399 247 34 62 chr17 26832088 26832134 -58606346 + MLT1G1 LTR MaLR 98 144 -451 478 179 259 0 chr17 26832134 26832246 -58606234 - AluJo SINE Alu -169 143 3 2164 130 0 3 chr17 26832257 26832550 -58605930 - AluSx SINE Alu -20 292 1 568 182 36 18 chr17 26832879 26832961 -58605519 + CT-rich Low_complexity Low_complexity 1 80 -88 2464 65 0 49 chr17 26832961 26833286 -58605194 - AluY SINE Alu -2 309 1 568 182 36 18 chr17 26833286 26833368 -58605112 + CT-rich Low_complexity Low_complexity 80 168 0 2018 110 67 0 chr17 26833368 26833650 -58604830 - AluSg SINE Alu -9 301 1 2117 120 11 0 chr17 26833652 26833935 -58604545 - AluSx SINE Alu -16 296 11 2970 152 44 46 chr17 26833951 26834089 -58604391 - L1MA7 LINE L1 0 6291 6154 728 178 0 8 chr17 26834089 26834218 -58604262 - FLAM_C SINE Alu -5 128 1 2970 152 44 46 chr17 26834218 26834274 -58604206 - L1MA7 LINE L1 -137 6154 6099 2391 104 0 0 chr17 26834274 26834581 -58603899 + AluSg1 SINE Alu 1 307 -2 2970 152 44 46 chr17 26834581 26835043 -58603437 - L1MA7 LINE L1 -192 6099 5635 2194 104 0 30 chr17 26835048 26835345 -58603135 - AluY SINE Alu -23 288 1 1157 75 0 0 chr17 26835345 26835479 -58603001 - AluSg SINE Alu -176 134 1 1570 124 22 91 chr17 26835479 26835754 -58602726 - AluSx SINE Alu -13 299 44 847 125 0 23 chr17 26835754 26835882 -58602598 + AluSg/x SINE Alu 184 308 -4 911 228 149 94 chr17 26835983 26836336 -58602144 - MLT1D LTR MaLR -9 496 164 1837 137 29 177 chr17 26836336 26836478 -58602002 + LTR26B LTR ERV1 3 164 -367 2432 90 0 0 chr17 26836478 26836779 -58601701 + AluSp SINE Alu 3 303 -10 1837 137 29 177 chr17 26836779 26836831 -58601649 + LTR26B LTR ERV1 164 222 -309 2430 97 7 0 chr17 26836831 26837141 -58601339 - AluSx SINE Alu 0 312 1 1837 137 29 177 chr17 26837141 26837426 -58601054 + LTR26B LTR ERV1 222 373 -158 2189 126 7 16 chr17 26837426 26837736 -58600744 - AluSx SINE Alu -1 311 5 1837 137 29 177 chr17 26837736 26837875 -58600605 + LTR26B LTR ERV1 373 531 0 911 228 149 94 chr17 26837875 26837900 -58600580 - MLT1D LTR MaLR -341 164 142 1859 173 0 13 chr17 26837900 26838201 -58600279 + AluJb SINE Alu 1 297 -15 2338 97 3 0 chr17 26838204 26838502 -58599978 + AluSq SINE Alu 1 299 -14 911 228 149 94 chr17 26838502 26838588 -58599892 - MLT1D LTR MaLR -364 141 1 945 269 44 62 chr17 26839106 26839127 -58599353 - L2 LINE L2 0 3313 3293 1873 153 14 3 chr17 26839127 26839421 -58599059 - AluSx SINE Alu -15 297 1 945 269 44 62 chr17 26839421 26839622 -58598858 - L2 LINE L2 -20 3293 3090 2027 135 3 0 chr17 26839622 26839904 -58598576 + AluSx SINE Alu 16 298 -14 945 269 44 62 chr17 26839904 26840130 -58598350 - L2 LINE L2 -223 3090 2872 1242 237 219 17 chr17 26840491 26840967 -58597513 + MLT1E2 LTR MaLR 55 626 0 2194 118 0 0 chr17 26841215 26841511 -58596969 + AluSx SINE Alu 1 296 -16 355 278 117 61 chr17 26842220 26842315 -58596165 + MIR SINE MIR 47 135 -127 2271 112 0 0 chr17 26842315 26842609 -58595871 + AluSx SINE Alu 1 294 -18 355 278 117 61 chr17 26842609 26842693 -58595787 + MIR SINE MIR 135 236 -26 2454 73 3 7 chr17 26842852 26843153 -58595327 - AluSg SINE Alu -10 300 1 1014 192 0 12 chr17 26843162 26843329 -58595151 - AluJ SINE Alu -10 302 138 741 268 160 26 chr17 26843418 26843761 -58594719 + L2 LINE L2 2925 3313 0 1913 149 31 0 chr17 26843928 26844217 -58594263 - AluJb SINE Alu -14 298 1 679 146 54 8 chr17 26844231 26844361 -58594119 - AluJ SINE Alu -175 137 2 2255 99 3 0 chr17 26844394 26844714 -58593766 + AluSq SINE Alu 2 322 0 332 278 183 0 chr17 26844714 26844840 -58593640 - MER91A DNA MER1_type -47 149 1 312 27 0 0 chr17 26845578 26845615 -58592865 + (A)n Simple_repeat Simple_repeat 1 37 0 2497 51 3 0 chr17 26846611 26846903 -58591577 + AluY SINE Alu 1 293 -18 1066 238 151 48 chr17 26847022 26847485 -58590995 + MLT1H LTR MaLR 22 532 -17 2190 113 10 13 chr17 26847485 26847795 -58590685 - AluSx SINE Alu -3 309 1 2353 94 13 0 chr17 26848043 26848350 -58590130 - AluSx SINE Alu 0 312 2 554 291 29 8 chr17 26848354 26848598 -58589882 + L2 LINE L2 2807 3055 -258 2439 107 0 0 chr17 26848735 26849077 -58589403 - AluSx SINE Alu 0 342 1 778 112 0 77 chr17 26849164 26849307 -58589173 - FLAM_C SINE Alu -1 132 1 21 0 0 0 chr17 26849759 26849780 -58588700 + AT_rich Low_complexity Low_complexity 1 21 0 768 218 93 35 chr17 26850289 26850492 -58587988 - MIR SINE MIR -33 229 10 196 293 13 40 chr17 26850511 26850586 -58587894 - MIR SINE MIR 0 262 190 451 258 106 71 chr17 26850788 26850913 -58587567 + MIR SINE MIR 1 120 -142 1667 145 0 52 chr17 26850913 26851182 -58587298 + AluSx SINE Alu 37 291 -21 451 258 106 71 chr17 26851182 26851238 -58587242 + MIR SINE MIR 120 192 -70 1524 157 122 16 chr17 26851238 26851493 -58586987 + AluJo SINE Alu 1 282 -30 451 258 106 71 chr17 26851493 26851508 -58586972 + MIR SINE MIR 192 205 -57 465 288 52 2 chr17 26851559 26851799 -58586681 - MLT1J2 LTR MaLR -31 419 125 403 190 9 86 chr17 26851838 26851954 -58586526 + AluJb SINE Alu 87 193 -119 226 286 0 0 chr17 26851954 26852010 -58586470 + MER66B LTR ERV1 1 56 -430 1966 81 0 0 chr17 26852013 26852248 -58586232 + AluSq SINE Alu 1 235 -78 2536 172 44 2 chr17 26852250 26852727 -58585753 + L1MB3 LINE L1 5643 6139 -44 1892 154 14 7 chr17 26852730 26853016 -58585464 + AluJb SINE Alu 1 288 -24 1139 157 73 70 chr17 26853094 26853380 -58585100 + L1MB7 LINE L1 5882 6168 -16 189 0 0 0 chr17 26853418 26853439 -58585041 + (CA)n Simple_repeat Simple_repeat 2 22 0 222 37 0 0 chr17 26853526 26853553 -58584927 + (TC)n Simple_repeat Simple_repeat 2 28 0 2091 148 3 0 chr17 26853648 26853951 -58584529 + AluJb SINE Alu 1 304 -8 806 189 0 20 chr17 26853963 26854111 -58584369 + FRAM SINE Alu 11 155 -21 1384 168 8 120 chr17 26854121 26854472 -58584008 - AluJb SINE Alu 0 312 1 532 248 37 51 chr17 26855004 26855141 -58583339 + MER2 DNA MER2_type 1 135 -210 1174 190 145 22 chr17 26855141 26855410 -58583070 - AluJo SINE Alu 0 302 1 532 248 37 51 chr17 26855410 26855486 -58582994 + MER2 DNA MER2_type 135 211 -134 1095 172 91 10 chr17 26855712 26855921 -58582559 + AluJo SINE Alu 82 307 -5 632 278 51 68 chr17 26855922 26856389 -58582091 + L1M4 LINE L1 4159 4617 -1529 832 127 0 0 chr17 26856400 26856510 -58581970 - AluJb SINE Alu -25 287 178 2202 104 17 0 chr17 26856594 26856891 -58581589 - AluY SINE Alu -9 302 1 225 94 0 0 chr17 26858090 26858122 -58580358 + (A)n Simple_repeat Simple_repeat 1 32 0 2148 143 0 3 chr17 26858193 26858501 -58579979 - AluJb SINE Alu -5 307 1 213 94 0 0 chr17 26861483 26861515 -58576965 + (A)n Simple_repeat Simple_repeat 1 32 0 198 0 0 0 chr17 26861855 26861877 -58576603 + (CAAAAA)n Simple_repeat Simple_repeat 2 23 0 26 50 0 0 chr17 26862211 26862251 -58576229 + AT_rich Low_complexity Low_complexity 1 40 0 1681 219 148 28 chr17 26862869 26863199 -58575281 + L1MC4 LINE L1 6960 7249 -793 1685 166 13 46 chr17 26863199 26863506 -58574974 - AluJb SINE Alu -14 298 2 1681 219 148 28 chr17 26863506 26863811 -58574669 + L1MC4 LINE L1 7249 7671 -371 689 225 193 0 chr17 26863981 26864199 -58574281 + MIR SINE MIR 2 261 -1 1950 139 4 0 chr17 26864532 26864813 -58573667 - AluJb SINE Alu -17 295 14 843 273 83 16 chr17 26864908 26865271 -58573209 - L1MC4 LINE L1 -43 7999 7613 853 80 0 43 chr17 26868500 26868688 -58569792 + (TA)n Simple_repeat Simple_repeat 1 180 0 965 170 0 0 chr17 26868688 26868841 -58569639 - AluJb SINE Alu -22 290 138 223 178 0 0 chr17 26868846 26868891 -58569589 + (TA)n Simple_repeat Simple_repeat 1 45 0 767 192 0 0 chr17 26868897 26869027 -58569453 + FLAM_C SINE Alu 2 131 -12 1192 160 26 120 chr17 26869057 26869287 -58569193 + L1M4 LINE L1 4964 5214 -932 2085 148 0 3 chr17 26869287 26869598 -58568882 - AluSx SINE Alu -2 310 1 1192 160 26 120 chr17 26869598 26869679 -58568801 + L1M4 LINE L1 5214 5241 -905 1921 143 9 19 chr17 26869679 26869994 -58568486 - AluJb SINE Alu 0 312 1 1192 160 26 120 chr17 26869994 26870031 -58568449 + L1M4 LINE L1 5241 5280 -866 1286 98 0 0 chr17 26870031 26870204 -58568276 - AluY SINE Alu -14 297 125 843 273 83 16 chr17 26871421 26871784 -58566696 + L1MC4 LINE L1 7613 7999 -43 1950 139 4 0 chr17 26871879 26872160 -58566320 + AluJb SINE Alu 14 295 -17 689 225 193 0 chr17 26872493 26872711 -58565769 - MIR SINE MIR -1 261 2 1681 219 148 28 chr17 26872881 26873186 -58565294 - L1MC4 LINE L1 -371 7671 7404 1685 166 13 46 chr17 26873186 26873493 -58564987 + AluJb SINE Alu 2 298 -14 1681 219 148 28 chr17 26873493 26873823 -58564657 - L1MC4 LINE L1 -638 7404 6960 26 50 0 0 chr17 26874441 26874481 -58563999 + AT_rich Low_complexity Low_complexity 1 40 0 198 0 0 0 chr17 26874815 26874837 -58563643 + (TTTTTG)n Simple_repeat Simple_repeat 2 23 0 222 91 0 0 chr17 26875177 26875210 -58563270 + (T)n Simple_repeat Simple_repeat 1 33 0 485 76 59 0 chr17 26875952 26876070 -58562410 + (TA)n Simple_repeat Simple_repeat 1 125 0 2062 136 3 0 chr17 26876570 26876864 -58561616 + AluSc SINE Alu 1 295 -14 248 302 22 62 chr17 26876987 26877166 -58561314 + MIR3 SINE MIR 37 208 0 326 127 6 45 chr17 26877861 26877932 -58560548 - FAM SINE Alu -84 91 29 22 0 0 0 chr17 26878069 26878091 -58560389 + AT_rich Low_complexity Low_complexity 1 22 0 2544 76 0 13 chr17 26878137 26878453 -58560027 + AluSp SINE Alu 1 312 -1 282 87 0 0 chr17 26878455 26878501 -58559979 + (TA)n Simple_repeat Simple_repeat 1 46 0 23 68 0 0 chr17 26878586 26878630 -58559850 + AT_rich Low_complexity Low_complexity 1 44 0 203 184 0 0 chr17 26878856 26878894 -58559586 + (TA)n Simple_repeat Simple_repeat 1 38 0 2296 113 7 0 chr17 26878943 26879252 -58559228 - AluSp SINE Alu -2 311 1 2940 103 15 8 chr17 26879505 26879993 -58558487 + MER1A DNA MER1_type 1 529 0 2285 110 3 3 chr17 26880193 26880503 -58557977 - AluSq SINE Alu -3 310 1 330 233 196 31 chr17 26881405 26881568 -58556912 + MIR SINE MIR 73 262 0 205 308 162 0 chr17 26881646 26881763 -58556717 + MIR SINE MIR 48 183 -79 197 182 91 18 chr17 26881902 26881957 -58556523 + L2 LINE L2 3247 3305 -8 192 174 130 0 chr17 26882252 26882298 -58556182 + MIR SINE MIR 206 257 -5 249 211 0 0 chr17 26883389 26883441 -58555039 - L1MC4 LINE L1 -1339 6703 6652 300 53 0 0 chr17 26883442 26883480 -58555000 + (CA)n Simple_repeat Simple_repeat 1 38 0 21 57 0 0 chr17 26883831 26883866 -58554614 + AT_rich Low_complexity Low_complexity 1 35 0 2377 41 3 31 chr17 26884002 26884317 -58554163 + AluY SINE Alu 1 307 0 474 215 31 54 chr17 26884839 26884969 -58553511 + MLT1K LTR MaLR 447 573 -15 621 192 28 22 chr17 26885857 26886011 -58552469 + L1P1 LINE L1 5357 5518 -637 509 167 54 152 chr17 26886063 26886321 -58552159 + MER33 DNA MER1_type 1 221 -87 600 178 9 0 chr17 26886375 26886482 -58551998 - FLAM_A SINE Alu -33 109 2 478 140 0 105 chr17 26886483 26886597 -58551883 + MER33 DNA MER1_type 257 358 -5 1251 259 93 56 chr17 26886607 26887255 -58551225 + HAL1 LINE L1 1524 2195 -312 2099 80 25 0 chr17 26887426 26887722 -58550758 + AluY SINE Alu 1 303 0 420 67 0 0 chr17 26888498 26888558 -58549922 + (TG)n Simple_repeat Simple_repeat 2 61 0 21 57 0 0 chr17 26891219 26891254 -58547226 + GC_rich Low_complexity Low_complexity 1 35 0 22 35 0 0 chr17 26891694 26891723 -58546757 + GC_rich Low_complexity Low_complexity 1 29 0 1493 142 25 82 chr17 26892324 26892641 -58545839 - AluJb SINE Alu -13 299 1 1882 111 18 90 chr17 26893143 26893477 -58545003 + AluSx SINE Alu 1 310 -2 1504 180 33 4 chr17 26893957 26894201 -58544279 + AluJb SINE Alu 1 251 -61 579 106 0 138 chr17 26894201 26894277 -58544203 + LTR5 LTR ERVK 1 56 -913 7735 24 1 2 chr17 26894277 26895305 -58543175 + L1PA3 LINE L1 5141 6167 0 579 106 0 138 chr17 26895305 26895350 -58543130 + LTR5 LTR ERVK 56 106 -863 8608 60 6 19 chr17 26895350 26895580 -58542900 + MER11C LTR ERVK 1 232 -839 2560 71 0 0 chr17 26895580 26895891 -58542589 - AluY SINE Alu 0 311 1 8608 60 6 19 chr17 26895891 26896743 -58541737 + MER11C LTR ERVK 232 1069 -2 4263 159 25 52 chr17 26896745 26897638 -58540842 + LTR5 LTR ERVK 101 969 0 351 143 32 0 chr17 26897646 26897709 -58540771 + AluJb SINE Alu 238 302 0 285 125 0 0 chr17 26897712 26897752 -58540728 + Alu SINE Alu 1 40 -259 1258 238 72 83 chr17 26897752 26897832 -58540648 - L1M4 LINE L1 -2112 4034 3955 2020 105 0 89 chr17 26897832 26897993 -58540487 - AluSg SINE Alu -15 295 176 2478 71 0 43 chr17 26897993 26898317 -58540163 - AluY SINE Alu -1 310 1 2020 105 0 89 chr17 26898317 26898479 -58540001 - AluSg SINE Alu -134 176 1 1258 238 72 83 chr17 26898479 26898864 -58539616 - L1M4 LINE L1 -2191 3955 3577 2141 108 0 3 chr17 26898864 26899150 -58539330 - AluSc SINE Alu -23 286 2 1258 238 72 83 chr17 26899150 26899414 -58539066 - L1M4 LINE L1 -2569 3577 3312 2269 112 6 6 chr17 26899425 26899737 -58538743 - AluSx SINE Alu 0 312 1 460 207 60 9 chr17 26899752 26899868 -58538612 + L1ME4a LINE L1 5978 6099 -22 365 279 19 51 chr17 26899907 26899999 -58538481 + L1ME4a LINE L1 5955 6041 -80 1923 134 34 10 chr17 26899999 26900290 -58538190 - AluSx SINE Alu -13 299 2 365 279 19 51 chr17 26900290 26900355 -58538125 + L1ME4a LINE L1 6041 6107 -14 1865 130 63 7 chr17 26900517 26900802 -58537678 + AluSx SINE Alu 1 301 -11 225 306 38 82 chr17 26900821 26901004 -58537476 + L3 LINE CR1 1243 1417 -160 204 283 40 20 chr17 26901010 26901109 -58537371 + MER5A DNA MER1_type 4 104 -85 2356 101 0 19 chr17 26901135 26901453 -58537027 + AluSq SINE Alu 1 312 -1 230 147 0 0 chr17 26901504 26901538 -58536942 - Alu SINE Alu -17 285 252 235 241 0 13 chr17 26901618 26901697 -58536783 - L1M4 LINE L1 -1923 4223 4146 996 187 89 9 chr17 26901698 26901912 -58536568 - AluJo SINE Alu 0 312 82 632 190 81 81 chr17 26902156 26902232 -58536248 - MER2 DNA MER2_type -134 211 136 1307 178 148 19 chr17 26902232 26902496 -58535984 + AluJo SINE Alu 1 298 -4 632 190 81 81 chr17 26902496 26902630 -58535850 - MER2 DNA MER2_type -208 137 1 385 111 0 32 chr17 26902845 26902908 -58535572 + LTR7 LTR ERV1 1 61 -389 1151 133 28 19 chr17 26902978 26903189 -58535291 + LTR7 LTR ERV1 238 450 0 1765 107 8 0 chr17 26903189 26903431 -58535049 + AluSp SINE Alu 70 313 0 570 273 53 47 chr17 26903755 26904074 -58534406 + L1M4 LINE L1 3873 4193 -1953 2386 88 0 3 chr17 26904131 26904428 -58534052 + AluSc SINE Alu 1 296 -13 1406 189 20 122 chr17 26904429 26904888 -58533592 - MLT2D LTR ERVL -2 412 1 385 203 30 54 chr17 26904974 26905134 -58533346 + MLT1G LTR MaLR 306 527 -63 2143 95 10 20 chr17 26905134 26905429 -58533051 - AluSx SINE Alu -20 292 1 385 203 30 54 chr17 26905429 26905487 -58532993 + MLT1G LTR MaLR 527 585 -5 1625 169 3 14 chr17 26905669 26905959 -58532521 - AluJb SINE Alu -17 295 9 299 106 0 0 chr17 26905959 26906006 -58532474 + Alu SINE Alu 255 301 0 1279 117 0 0 chr17 26906009 26906189 -58532291 + AluSg/x SINE Alu 121 300 -12 2314 103 0 0 chr17 26906302 26906603 -58531877 - AluSx SINE Alu -11 301 1 2399 257 106 34 chr17 26906665 26907467 -58531013 + L2 LINE L2 1152 1894 -1419 1959 145 17 0 chr17 26907467 26907763 -58530717 + AluJb SINE Alu 1 301 -11 2399 257 106 34 chr17 26907763 26907881 -58530599 + L2 LINE L2 1894 2002 -1311 2156 103 7 3 chr17 26907881 26908173 -58530307 - AluSg SINE Alu -19 291 1 2399 257 106 34 chr17 26908173 26908277 -58530203 + L2 LINE L2 2002 2097 -1216 2317 87 0 13 chr17 26908277 26908577 -58529903 - AluY SINE Alu -15 296 1 2399 257 106 34 chr17 26908577 26909318 -58529162 + L2 LINE L2 2097 3103 -210 2142 107 0 16 chr17 26909318 26909628 -58528852 + AluSx SINE Alu 1 305 -7 2399 257 106 34 chr17 26909628 26909759 -58528721 + L2 LINE L2 3103 3223 -90 576 121 0 0 chr17 26909763 26909846 -58528634 - 5S rRNA rRNA -32 89 7 343 195 85 0 chr17 26909888 26909970 -58528510 + L2 LINE L2 3225 3313 0 2333 57 3 17 chr17 26910126 26910426 -58528054 + AluY SINE Alu 1 296 -15 5612 132 21 5 chr17 26910428 26911543 -58526937 + L1PA16 LINE L1 5015 6150 -16 852 114 0 0 chr17 26912423 26912546 -58525934 - FRAM SINE Alu -8 168 46 950 100 0 0 chr17 26912735 26912865 -58525615 + AluSp/q SINE Alu 166 295 -18 688 307 110 63 chr17 26912867 26913356 -58525124 + L1M4 LINE L1 3982 4493 -1653 225 174 0 0 chr17 26914784 26914830 -58523650 + (TAAG)n Simple_repeat Simple_repeat 1 46 0 418 294 118 45 chr17 26914842 26915159 -58523321 + L1M4 LINE L1 4228 5393 -753 2857 186 51 10 chr17 26916419 26917012 -58521468 - L1PB4 LINE L1 0 6156 5540 256 351 36 26 chr17 26917202 26917507 -58520973 - L2 LINE L2 -509 2805 2498 263 289 111 33 chr17 26926215 26926395 -58512085 + L2 LINE L2 3108 3301 -12 411 266 65 0 chr17 26926420 26926544 -58511936 - MIR SINE MIR -43 219 88 5049 131 8 4 chr17 26927927 26928699 -58509781 + LTR5 LTR ERVK 2 776 -193 7442 37 9 9 chr17 26929252 26930908 -58507572 + L1PA5 LINE L1 4499 6154 0 1141 303 40 31 chr17 26934082 26934762 -58503718 - L1MC3 LINE L1 -1621 6164 5479 2168 109 0 0 chr17 26937359 26937662 -58500818 - AluY SINE Alu -8 303 1 193 269 13 77 chr17 26939778 26939856 -58498624 + MIR SINE MIR 99 171 -91 300 143 11 143 chr17 26939862 26939953 -58498527 + SN5 Other centromeric 300 378 -77 1596 149 111 32 chr17 26940464 26940806 -58497674 - THE1C LTR MaLR 0 375 7 363 277 0 0 chr17 26941954 26942091 -58496389 + (TG)n Simple_repeat Simple_repeat 1 137 0 3243 116 8 8 chr17 26942292 26942776 -58495704 - MER1A DNA MER1_type 0 529 46 902 187 22 11 chr17 26942965 26943147 -58495333 - MLT1C LTR MaLR 0 467 284 3873 205 95 71 chr17 26943178 26944324 -58494156 + MLT-int LTR MaLR 246 1419 -316 560 164 112 0 chr17 26944570 26944686 -58493794 - MLT1B-int LTR MaLR -1240 131 3 2055 180 13 13 chr17 26944695 26945079 -58493401 - MLT1B LTR MaLR -6 384 1 531 241 76 7 chr17 26945108 26945253 -58493227 - MLT1I LTR MaLR -198 211 57 4445 160 14 59 chr17 26945253 26946385 -58492095 + L1PA16 LINE L1 5005 6061 -105 262 155 0 17 chr17 26946386 26946444 -58492036 + L1PA16 LINE L1 6098 6154 -12 11613 153 68 11 chr17 26946445 26948559 -58489921 - Tigger1 DNA MER2_type -182 2236 3 500 200 56 8 chr17 26948562 26948687 -58489793 + MER2 DNA MER2_type 190 320 -25 206 62 31 0 chr17 26948860 26948892 -58489588 + (CAAA)n Simple_repeat Simple_repeat 4 36 0 343 314 102 24 chr17 26948988 26949370 -58489110 + L1ME3A LINE L1 4567 4978 -1168 429 236 88 60 chr17 26950450 26950666 -58487814 - L2 LINE L2 0 3313 3092 430 281 62 0 chr17 26950740 26950886 -58487594 + MIR SINE MIR 14 168 -94 2256 269 71 21 chr17 26951038 26951220 -58487260 + L1ME3A LINE L1 5319 5490 -680 2015 122 0 7 chr17 26951220 26951530 -58486950 + AluSx SINE Alu 1 308 0 2256 269 71 21 chr17 26951530 26952149 -58486331 + L1ME3A LINE L1 5490 6161 -9 182 296 46 37 chr17 26952250 26952358 -58486122 - MIR3 SINE MIR 0 208 100 309 241 28 0 chr17 26952548 26952628 -58485852 - MIR SINE MIR -56 152 70 189 0 0 0 chr17 26953234 26953255 -58485225 + (TAAAAA)n Simple_repeat Simple_repeat 3 23 0 6293 90 28 7 chr17 26953317 26954549 -58483931 + L1PA13 LINE L1 4912 6163 0 805 115 0 16 chr17 26954777 26955012 -58483468 + AluSg1 SINE Alu 2 312 0 5378 40 5 8 chr17 26955014 26955661 -58482819 + SVA Other Other 733 1377 -9 290 317 66 44 chr17 26957531 26957758 -58480722 + MIR SINE MIR 31 262 0 1589 187 13 26 chr17 26958112 26958417 -58480063 + AluJo SINE Alu 1 301 -11 243 279 58 0 chr17 26958811 26958897 -58479583 - MIR SINE MIR -71 191 101 2295 146 85 15 chr17 26959881 26960279 -58478201 - MSTB LTR MaLR 0 426 1 332 184 79 0 chr17 26960471 26960547 -58477933 + L1MD2 LINE L1 6274 6355 -4 183 295 0 74 chr17 26961339 26961434 -58477046 - L2 LINE L2 -1294 2020 1933 411 261 92 7 chr17 26961904 26962057 -58476423 - MIR3 SINE MIR -17 191 26 2460 250 42 27 chr17 26962404 26963116 -58475364 + L1ME LINE L1 4475 5175 -996 1841 110 68 74 chr17 26963116 26963425 -58475055 + AluSg SINE Alu 1 307 -3 1934 120 35 60 chr17 26963429 26963745 -58474735 + AluSg SINE Alu 1 308 -2 2460 250 42 27 chr17 26963745 26963936 -58474544 + L1ME LINE L1 5177 5427 -744 1003 307 20 3 chr17 26963938 26964244 -58474236 + L1ME LINE L1 5481 5791 -379 343 186 57 0 chr17 26964263 26964333 -58474147 - MER5A DNA MER1_type -1 188 115 279 128 128 51 chr17 26964658 26964736 -58473744 + L1MB7 LINE L1 6047 6130 -54 1779 148 32 3 chr17 26964742 26965025 -58473455 - AluJo SINE Alu -21 291 1 891 144 0 0 chr17 26965612 26965737 -58472743 - FLAM_C SINE Alu -18 125 1 9039 44 60 106 chr17 26967876 26969270 -58469210 - SVA Other Other -9 1377 48 198 0 0 0 chr17 26969278 26969300 -58469180 + (GGGAGA)n Simple_repeat Simple_repeat 1 22 0 25 0 0 0 chr17 26969495 26969520 -58468960 + AT_rich Low_complexity Low_complexity 1 25 0 2144 133 0 13 chr17 26970677 26970992 -58467488 + AluJb SINE Alu 1 311 -1 25 65 0 0 chr17 26972614 26972660 -58465820 + AT_rich Low_complexity Low_complexity 1 46 0 1747 161 26 19 chr17 26972803 26973113 -58465367 + AluJb SINE Alu 1 312 0 1664 150 3 48 chr17 26973220 26973513 -58464967 - AluJo SINE Alu -32 280 1 22 35 0 0 chr17 26973697 26973726 -58464754 + AT_rich Low_complexity Low_complexity 1 29 0 367 178 33 56 chr17 26974402 26974492 -58463988 + Tigger4(Zombi) DNA MER2_type 2644 2731 0 2115 113 3 7 chr17 26975145 26975445 -58463035 + AluSx SINE Alu 1 299 -13 2612 49 0 0 chr17 26975665 26975971 -58462509 - AluY SINE Alu -5 306 1 304 299 81 17 chr17 26976486 26976660 -58461820 + HAL1 LINE L1 258 442 -2065 231 212 29 109 chr17 26976657 26976794 -58461686 + HAL1 LINE L1 674 799 -1708 * 996 156 0 75 chr17 26976812 26976998 -58461482 + AluJb SINE Alu 95 266 -46 1388 264 211 32 chr17 26977024 26977937 -58460543 + HAL1 LINE L1 808 1884 -623 1218 221 39 7 chr17 26978211 26978491 -58459989 - AluJo SINE Alu -23 289 1 226 231 77 0 chr17 26979601 26979666 -58458814 + L1MC4 LINE L1 6994 7063 -979 393 183 32 21 chr17 26979680 26979821 -58458659 + L1MC4 LINE L1 7821 8042 0 187 333 46 52 chr17 26979896 26980070 -58458410 - MIR SINE MIR -70 192 20 452 260 87 109 chr17 26980084 26980329 -58458151 + MIR SINE MIR 3 243 -19 2142 117 0 3 chr17 26980329 26980627 -58457853 + AluSq SINE Alu 1 297 -16 452 260 87 109 chr17 26980627 26980646 -58457834 + MIR SINE MIR 243 261 -1 1978 159 0 0 chr17 26981432 26981728 -58456752 - AluSx SINE Alu -16 296 1 2030 130 0 10 chr17 26981786 26982078 -58456402 + AluSx SINE Alu 1 289 -23 975 107 0 8 chr17 26982751 26982882 -58455598 + AluSg SINE Alu 1 130 -180 2263 85 3 3 chr17 26982885 26983179 -58455301 + AluSg SINE Alu 1 294 -16 581 245 153 10 chr17 26983243 26983439 -58455041 + MIR SINE MIR 37 260 -2 348 281 41 41 chr17 26983966 26984112 -58454368 - MIR SINE MIR 0 262 117 12345 125 39 23 chr17 26984114 26984416 -58454064 - Tigger1 DNA MER2_type -390 2028 1732 2134 125 0 26 chr17 26984416 26984727 -58453753 - AluSx SINE Alu -9 303 1 12345 125 39 23 chr17 26984727 26986130 -58452350 - Tigger1 DNA MER2_type -686 1732 285 1763 172 3 13 chr17 26986130 26986432 -58452048 + AluJb SINE Alu 1 299 -13 12345 125 39 23 chr17 26986432 26986722 -58451758 - Tigger1 DNA MER2_type -2133 285 1 821 173 20 7 chr17 26986747 26986897 -58451583 - FRAM SINE Alu -15 161 10 377 158 0 24 chr17 26986897 26986979 -58451501 + L1MD1 LINE L1 6163 6242 0 2338 97 0 0 chr17 26987833 26988133 -58450347 + AluSx SINE Alu 1 300 -12 278 213 40 0 chr17 26989040 26989115 -58449365 + (TAAA)n Simple_repeat Simple_repeat 3 80 0 268 242 137 0 chr17 26989371 26989466 -58449014 - L1ME4a LINE L1 -43 6078 5971 4984 161 82 26 chr17 26989654 26990366 -58448114 - L1MC2 LINE L1 0 6344 5673 2385 97 0 0 chr17 26990366 26990675 -58447805 + AluSg1 SINE Alu 1 309 0 4984 161 82 26 chr17 26990675 26990980 -58447500 - L1MC2 LINE L1 -671 5673 5277 2780 7 0 0 chr17 26990980 26991278 -58447202 + AluYa5 SINE Alu 1 298 -13 4984 161 82 26 chr17 26991278 26991309 -58447171 - L1MC2 LINE L1 -1067 5277 5249 3243 209 51 79 chr17 26991304 26992519 -58445961 + L1ME1 LINE L1 4515 5658 -508 * 2448 81 0 0 chr17 26992519 26992817 -58445663 + AluY SINE Alu 1 298 -13 3243 209 51 79 chr17 26992817 26993308 -58445172 + L1ME1 LINE L1 5658 6161 -5 387 292 22 143 chr17 26993577 26993899 -58444581 + L2 LINE L2 2981 3263 -9 2065 134 3 0 chr17 26994085 26994383 -58444097 - AluSx SINE Alu -13 299 1 354 277 114 36 chr17 26994573 26994793 -58443687 - MIR SINE MIR -23 239 3 704 202 0 0 chr17 26994905 26995024 -58443456 - FLAM_A SINE Alu -4 138 20 382 256 78 0 chr17 26995547 26995637 -58442843 + MER117 DNA MER1_type 4 100 -97 291 299 135 29 chr17 26995639 26995913 -58442567 - L2 LINE L2 -1221 2093 1791 313 333 130 36 chr17 26996098 26996483 -58441997 - L2 LINE L2 -1907 1407 987 1740 80 0 0 chr17 26996952 26997165 -58441315 - AluSg/x SINE Alu -10 300 88 1949 164 0 0 chr17 26997254 26997553 -58440927 + AluSx SINE Alu 3 301 -11 207 0 0 0 chr17 26997944 26997967 -58440513 + (TG)n Simple_repeat Simple_repeat 2 24 0 535 276 130 25 chr17 26998143 26998466 -58440014 + L1ME4a LINE L1 5571 5927 -194 2105 99 3 23 chr17 26998863 26999167 -58439313 + AluSc SINE Alu 1 298 -11 488 314 29 15 chr17 26999868 27000072 -58438408 - Tigger8 DNA MER2_type -214 452 246 500 192 0 0 chr17 27000072 27000150 -58438330 - AluSg/x SINE Alu -17 292 215 265 302 127 42 chr17 27000218 27000407 -58438073 + MIR SINE MIR 2 206 -56 2207 123 0 0 chr17 27000481 27000783 -58437697 - AluSx SINE Alu -10 302 1 376 254 146 16 chr17 27001183 27001368 -58437112 + Tigger8 DNA MER2_type 313 521 -145 498 235 80 98 chr17 27002620 27002761 -58435719 - L1MC4a LINE L1 -14 6107 5965 1939 152 3 3 chr17 27002761 27003058 -58435422 - AluSx SINE Alu -15 297 1 498 235 80 98 chr17 27003058 27003322 -58435158 - L1MC4a LINE L1 -156 5965 5708 2129 122 3 16 chr17 27003322 27003626 -58434854 + AluSx SINE Alu 1 300 -12 498 235 80 98 chr17 27003626 27003658 -58434822 - L1MC4a LINE L1 -413 5708 5677 2480 67 0 0 chr17 27003696 27003995 -58434485 + AluY SINE Alu 1 299 -12 2211 111 0 26 chr17 27004086 27004392 -58434088 + AluSg SINE Alu 1 298 -12 535 265 134 33 chr17 27004395 27004731 -58433749 - L1MC4a LINE L1 -2185 5623 5254 405 287 106 74 chr17 27004837 27005625 -58432855 - L1MC4a LINE L1 -1145 5001 4240 2056 104 17 23 chr17 27005625 27005924 -58432556 - AluSq SINE Alu -15 298 2 405 287 106 74 chr17 27005924 27006119 -58432361 - L1MC4a LINE L1 -1906 4240 3980 2312 96 7 0 chr17 27006119 27006420 -58432060 - AluSq SINE Alu -10 303 1 405 287 106 74 chr17 27006420 27006480 -58432000 - L1MC4a LINE L1 -2166 3980 3923 588 223 9 9 chr17 27006497 27006609 -58431871 + AluJo/FLAM SINE Alu 2 113 -199 266 149 0 21 chr17 27006609 27006656 -58431824 + AluJo/FLAM SINE Alu 67 112 -190 1345 180 9 9 chr17 27006656 27006889 -58431591 + AluJb SINE Alu 66 298 -14 270 0 0 0 chr17 27007594 27007624 -58430856 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 538 233 8 31 chr17 27008695 27008824 -58429656 + L2 LINE L2 3188 3313 0 183 80 0 0 chr17 27009015 27009040 -58429440 + (A)n Simple_repeat Simple_repeat 1 25 0 227 246 98 0 chr17 27009517 27009578 -58428902 + MIR SINE MIR 1 67 -195 21 0 0 0 chr17 27010160 27010181 -58428299 + AT_rich Low_complexity Low_complexity 1 21 0 875 145 0 0 chr17 27010181 27010312 -58428168 - AluJb SINE Alu -181 131 1 2291 103 3 0 chr17 27011148 27011448 -58427032 + AluSp SINE Alu 1 301 -12 2273 112 0 10 chr17 27011829 27012133 -58426347 - AluSx SINE Alu -9 303 3 685 176 76 0 chr17 27012194 27012325 -58426155 - FLAM_C SINE Alu -2 141 1 2338 75 0 33 chr17 27012352 27012658 -58425822 + AluY SINE Alu 1 296 -15 353 282 203 10 chr17 27012996 27013198 -58425282 + MIR SINE MIR 7 247 -15 2197 71 17 17 chr17 27013305 27013602 -58424878 + AluSc SINE Alu 1 297 -12 5816 200 210 24 chr17 27015336 27017289 -58421191 - L1MDa LINE L1 -4203 2337 21 1963 155 7 0 chr17 27017323 27017614 -58420866 + AluJo SINE Alu 1 293 -19 2251 102 7 3 chr17 27017667 27017971 -58420509 - AluSg SINE Alu -5 305 1 2463 81 3 7 chr17 27017971 27018279 -58420201 - AluSp SINE Alu -5 308 1 22 0 0 0 chr17 27018883 27018905 -58419575 + AT_rich Low_complexity Low_complexity 1 22 0 227 247 0 71 chr17 27019862 27019947 -58418533 - HAL1 LINE L1 -914 1593 1515 308 256 159 34 chr17 27020031 27020382 -58418098 - L1MEd LINE L1 -4867 1252 858 273 93 0 0 chr17 27020749 27020792 -58417688 + L1MD3 LINE L1 7928 7970 -25 24 32 0 0 chr17 27020940 27020971 -58417509 + AT_rich Low_complexity Low_complexity 1 31 0 2475 79 0 0 chr17 27021484 27021788 -58416692 + AluSx SINE Alu 1 304 -8 429 167 0 0 chr17 27021788 27021866 -58416614 + (TA)n Simple_repeat Simple_repeat 1 78 0 246 315 0 0 chr17 27021877 27021966 -58416514 + L1MC4 LINE L1 6614 6702 -1340 554 303 81 14 chr17 27022670 27022881 -58415599 - MIR SINE MIR -35 227 3 300 195 17 102 chr17 27027703 27027821 -58410659 - L1ME4a LINE L1 -5 6116 6009 1228 144 21 10 chr17 27027857 27028051 -58410429 - AluJb SINE Alu -116 196 1 327 282 36 9 chr17 27028051 27028161 -58410319 - L1ME4a LINE L1 -144 5977 5865 293 233 81 47 chr17 27028266 27028352 -58410128 - MIR SINE MIR -168 94 6 928 231 153 31 chr17 27028726 27028997 -58409483 - L2 LINE L2 0 3313 2996 3697 102 4 4 chr17 27028997 27029508 -58408972 + MER9 LTR ERVK 1 511 0 928 231 153 31 chr17 27029508 27029557 -58408923 - L2 LINE L2 -317 2996 2954 26 0 0 0 chr17 27030734 27030760 -58407720 + AT_rich Low_complexity Low_complexity 1 26 0 276 282 51 51 chr17 27031164 27031281 -58407199 + L2 LINE L2 3156 3272 0 563 286 124 53 chr17 27031467 27031879 -58406601 + L2 LINE L2 2341 2781 -533 1214 192 58 151 chr17 27032359 27032623 -58405857 + L1MB4 LINE L1 4479 4766 -1380 2432 46 23 0 chr17 27032623 27032929 -58405551 + L1PA4 LINE L1 5841 6153 -2 1214 192 58 151 chr17 27032929 27033271 -58405209 + L1MB4 LINE L1 4766 5026 -1120 1970 148 7 3 chr17 27033271 27033575 -58404905 - AluSx SINE Alu -7 305 1 1214 192 58 151 chr17 27033575 27033602 -58404878 + L1MB4 LINE L1 5026 5054 -1092 662 248 13 34 chr17 27033689 27033923 -58404557 + L1MB4 LINE L1 5040 5268 -878 2285 97 3 16 chr17 27033941 27034252 -58404228 - AluSq SINE Alu -6 307 1 1010 211 0 37 chr17 27034276 27034494 -58403986 + AluJb SINE Alu 85 294 -18 2835 143 53 60 chr17 27034500 27035156 -58403324 + L1MB4 LINE L1 5491 6142 -38 2141 129 6 16 chr17 27035287 27035598 -58402882 - AluSx SINE Alu -4 308 1 183 129 0 0 chr17 27035757 27035788 -58402692 + (CAA)n Simple_repeat Simple_repeat 3 33 0 274 320 165 0 chr17 27036366 27036463 -58402017 + L2 LINE L2 3159 3271 -1 2605 104 3 0 chr17 27037142 27037496 -58400984 + THE1A LTR MaLR 1 355 0 11859 88 7 1 chr17 27037496 27039066 -58399414 + THE1A-int LTR MaLR 1 1580 0 2351 114 20 6 chr17 27039066 27039416 -58399064 + THE1A LTR MaLR 1 355 0 380 229 30 70 chr17 27039451 27039589 -58398891 + L1MC4a LINE L1 5691 5820 -1988 2064 128 27 0 chr17 27039589 27039886 -58398594 + AluSx SINE Alu 1 305 -7 380 229 30 70 chr17 27039886 27039948 -58398532 + L1MC4a LINE L1 5820 5883 -1925 21 0 0 0 chr17 27040578 27040599 -58397881 + AT_rich Low_complexity Low_complexity 1 21 0 537 249 61 12 chr17 27040680 27040845 -58397635 + MER58A DNA MER1_type 1 173 -51 491 261 235 18 chr17 27040949 27041160 -58397320 + MIR SINE MIR 14 262 0 1604 205 17 0 chr17 27041282 27041579 -58396901 - AluJb SINE Alu -6 306 5 2109 136 0 10 chr17 27041800 27042110 -58396370 + AluSx SINE Alu 1 307 -5 221 0 0 33 chr17 27043006 27043036 -58395444 + (TTTA)n Simple_repeat Simple_repeat 3 31 0 1602 178 7 27 chr17 27043045 27043338 -58395142 - AluJo SINE Alu -25 287 1 563 238 188 50 chr17 27043338 27043700 -58394780 + MER113 DNA MER1_type? 105 516 -5 824 220 13 0 chr17 27043784 27043943 -58394537 - FRAM SINE Alu -5 161 1 7475 32 5 0 chr17 27044790 27045982 -58392498 + L1PA4 LINE L1 4960 6155 0 22 35 0 0 chr17 27046610 27046639 -58391841 + AT_rich Low_complexity Low_complexity 1 29 0 2297 99 0 16 chr17 27046674 27046977 -58391503 - AluSx SINE Alu -14 298 1 1360 137 5 0 chr17 27047439 27047643 -58390837 + AluSg/x SINE Alu 102 306 -4 681 260 71 57 chr17 27048620 27049128 -58389352 + L1MC4 LINE L1 7527 8041 -1 16607 24 0 0 chr17 27050034 27052751 -58385729 + L1PA2 LINE L1 3438 6154 -1 25 75 0 0 chr17 27052938 27052991 -58385489 + AT_rich Low_complexity Low_complexity 1 53 0 264 206 163 21 chr17 27053232 27053373 -58385107 + L1MC4a LINE L1 5973 6133 -1675 1545 200 0 24 chr17 27054032 27054327 -58384153 + AluJo SINE Alu 17 304 -8 1732 181 3 7 chr17 27054448 27054757 -58383723 - AluJb SINE Alu -4 308 1 4616 141 22 32 chr17 27054851 27055830 -58382650 - L1MB8 LINE L1 -11 6167 5200 948 178 0 6 chr17 27055831 27055994 -58382486 - FRAM SINE Alu -15 161 1 1944 194 42 32 chr17 27055994 27056029 -58382451 - L1MB8 LINE L1 -933 5213 5180 2203 167 61 7 chr17 27056029 27056472 -58382008 + MLT1C LTR MaLR 1 467 0 1944 194 42 32 chr17 27056472 27056940 -58381540 - L1MB8 LINE L1 -966 5180 4705 1594 179 3 42 chr17 27059228 27059535 -58378945 - AluJo SINE Alu -17 295 1 300 179 0 0 chr17 27059584 27059640 -58378840 - L1ME4a LINE L1 -5 6116 6061 332 261 11 11 chr17 27059701 27059793 -58378687 - MER58A DNA MER1_type -6 218 127 526 260 8 0 chr17 27059857 27059984 -58378496 - MER58A DNA MER1_type 0 129 2 21 71 0 0 chr17 27060221 27060263 -58378217 + AT_rich Low_complexity Low_complexity 1 42 0 4291 159 20 44 chr17 27060656 27061203 -58377277 + L1MB5 LINE L1 5101 5615 -559 1834 162 3 17 chr17 27061203 27061493 -58376987 + AluJo SINE Alu 1 286 -26 4291 159 20 44 chr17 27061493 27061988 -58376492 + L1MB5 LINE L1 5615 6120 -54 1000 210 81 108 chr17 27062104 27062632 -58375848 + MER34 LTR ERV1 3 516 -26 22 56 0 0 chr17 27062945 27062981 -58375499 + AT_rich Low_complexity Low_complexity 1 36 0 1969 142 51 79 chr17 27063271 27063778 -58374702 - L1MB8 LINE L1 0 6178 5686 316 204 19 31 chr17 27064252 27064414 -58374066 + GA-rich Low_complexity Low_complexity 2 161 0 2888 167 58 71 chr17 27064905 27064963 -58373517 + LTR8A LTR ERV1 1 58 -669 2284 104 0 3 chr17 27064963 27065261 -58373219 - AluSx SINE Alu -15 297 1 2888 167 58 71 chr17 27065261 27065932 -58372548 + LTR8A LTR ERV1 58 720 -7 2386 83 0 3 chr17 27065940 27066241 -58372239 - AluSg SINE Alu -10 300 1 2195 132 0 3 chr17 27066483 27066787 -58371693 - AluSx SINE Alu -9 303 1 2073 103 6 40 chr17 27067616 27067965 -58370515 + MER4B LTR ERV1 1 337 -273 1348 108 24 14 chr17 27067965 27068178 -58370302 + MER4E LTR ERV1 552 766 0 22 0 0 0 chr17 27068863 27068885 -58369595 + AT_rich Low_complexity Low_complexity 1 22 0 681 239 32 0 chr17 27071595 27071750 -58366730 - MIR SINE MIR 0 262 103 199 273 218 18 chr17 27072386 27072496 -58365984 + MIR3 SINE MIR 67 198 -10 2130 127 0 3 chr17 27072519 27072819 -58365661 + AluSx SINE Alu 1 299 -13 656 153 0 0 chr17 27073494 27073612 -58364868 + L1MB3 LINE L1 6066 6183 0 331 135 0 0 chr17 27073619 27073671 -58364809 + AluJo SINE Alu 1 52 -250 342 130 0 0 chr17 27073672 27073718 -58364762 + L2 LINE L2 3250 3295 -18 1628 169 19 8 chr17 27073718 27073979 -58364501 + AluJo SINE Alu 38 301 -11 464 324 132 53 chr17 27074037 27074759 -58363721 - L2 LINE L2 -213 3059 2258 885 268 75 99 chr17 27074806 27075043 -58363437 - L2 LINE L2 -5 3308 3067 2418 64 0 3 chr17 27075043 27075339 -58363141 - AluSc SINE Alu -14 295 1 885 268 75 99 chr17 27075339 27075693 -58362787 - L2 LINE L2 -246 3067 2735 2534 150 16 23 chr17 27075696 27075814 -58362666 - L1MB2 LINE L1 0 6171 6054 2303 68 14 10 chr17 27075814 27076109 -58362371 - AluSp SINE Alu -17 296 1 2534 150 16 23 chr17 27076109 27076477 -58362003 - L1MB2 LINE L1 -117 6054 5688 874 137 11 40 chr17 27076477 27076727 -58361753 - L1MB2 LINE L1 -743 5403 5188 515 249 319 18 chr17 27076796 27077069 -58361411 - L2 LINE L2 -565 2749 2395 2901 219 75 68 chr17 27077093 27077563 -58360917 + L2 LINE L2 2127 2592 -721 2313 76 7 26 chr17 27077563 27077866 -58360614 - AluY SINE Alu -14 297 1 2901 219 75 68 chr17 27077866 27078586 -58359894 + L2 LINE L2 2592 3312 -1 291 309 10 31 chr17 27078583 27078680 -58359800 - L2 LINE L2 -927 2387 2293 * 35633 86 6 16 chr17 27079138 27085345 -58353135 + L1PA6 LINE L1 11 6154 0 408 302 134 65 chr17 27086061 27086611 -58351869 + L1ME LINE L1 4312 4899 -1247 2822 77 40 19 chr17 27086708 27087137 -58351343 + MER4C LTR ERV1 28 465 0 343 268 179 12 chr17 27087534 27087702 -58350778 + L1ME LINE L1 5623 5818 -303 2046 219 81 20 chr17 27087916 27088631 -58349849 - L1ME1 LINE L1 0 6184 5382 409 257 18 9 chr17 27088895 27089004 -58349476 + L1MDb LINE L1 775 884 -5525 2303 112 3 0 chr17 27089030 27089335 -58349145 - AluSp SINE Alu -7 306 1 1251 257 65 44 chr17 27089357 27089565 -58348915 + L1MDb LINE L1 873 1075 -5331 2209 138 0 0 chr17 27089565 27089876 -58348604 - AluSx SINE Alu -1 311 1 1251 257 65 44 chr17 27089876 27090371 -58348109 + L1MDb LINE L1 1075 1591 -4815 1803 165 0 7 chr17 27090374 27090659 -58347821 + AluJb SINE Alu 1 283 -29 1074 140 0 0 chr17 27090674 27090853 -58347627 + (GAA)n Simple_repeat Simple_repeat 1 179 0 410 138 0 11 chr17 27090861 27090948 -58347532 + (GGAGAA)n Simple_repeat Simple_repeat 6 91 0 1367 218 75 66 chr17 27090967 27091183 -58347297 + L1MDb LINE L1 1592 1804 -4602 2317 77 3 61 chr17 27091183 27091510 -58346970 + AluY SINE Alu 1 308 -3 1367 218 75 66 chr17 27091510 27091916 -58346564 + L1MDb LINE L1 1804 2220 -4186 2026 227 42 36 chr17 27091936 27092135 -58346345 + L1MDb LINE L1 2300 2496 -3910 2129 108 3 7 chr17 27092135 27092452 -58346028 - AluSx SINE Alu 0 316 1 2026 227 42 36 chr17 27092452 27093035 -58345445 + L1MDb LINE L1 2496 3097 -3309 26 0 0 0 chr17 27093281 27093307 -58345173 + AT_rich Low_complexity Low_complexity 1 26 0 216 184 0 0 chr17 27093307 27093356 -58345124 + T-rich Low_complexity Low_complexity 3 51 0 399 43 58 14 chr17 27093886 27093955 -58344525 + (CTATT)n Simple_repeat Simple_repeat 2 73 0 398 221 79 14 chr17 27093984 27094124 -58344356 - Charlie2 DNA MER1_type 0 2862 2714 898 140 0 7 chr17 27094124 27094260 -58344220 - FLAM_C SINE Alu -3 140 6 1007 226 71 38 chr17 27094271 27094394 -58344086 - Charlie2 DNA MER1_type -157 2705 2588 1830 165 6 22 chr17 27094394 27094709 -58343771 - AluJb SINE Alu -2 310 1 1007 226 71 38 chr17 27094709 27095037 -58343443 - Charlie2 DNA MER1_type -274 2588 2239 706 204 158 21 chr17 27095054 27095294 -58343186 - Charlie2 DNA MER1_type -2421 361 89 293 111 37 0 chr17 27095312 27095366 -58343114 + GA-rich Low_complexity Low_complexity 4 59 0 189 0 0 0 chr17 27096942 27096963 -58341517 + (A)n Simple_repeat Simple_repeat 1 21 0 276 30 0 0 chr17 27097233 27097266 -58341214 + (CA)n Simple_repeat Simple_repeat 2 34 0 252 0 0 0 chr17 27098014 27098042 -58340438 + (A)n Simple_repeat Simple_repeat 1 28 0 1531 148 23 31 chr17 27098042 27098299 -58340181 - AluJo SINE Alu -55 257 3 243 238 0 113 chr17 27098474 27098642 -58339838 - L1M4 LINE L1 -3486 2660 2512 418 204 120 56 chr17 27099494 27099710 -58338770 - MER112 DNA MER1_type -2 258 29 2311 103 0 0 chr17 27099850 27100151 -58338329 + AluSx SINE Alu 1 301 -11 326 312 40 24 chr17 27100200 27100325 -58338155 - L2 LINE L2 0 3313 3187 514 259 50 96 chr17 27100339 27100578 -58337902 - MIR SINE MIR -33 229 2 589 186 81 0 chr17 27100734 27100858 -58337622 - FLAM_A SINE Alu -1 141 8 189 0 0 0 chr17 27101006 27101027 -58337453 + (A)n Simple_repeat Simple_repeat 1 21 0 2208 125 0 0 chr17 27101030 27101326 -58337154 + AluSp SINE Alu 1 296 -17 385 280 9 37 chr17 27101582 27101689 -58336791 + L2 LINE L2 3169 3272 0 325 267 99 10 chr17 27101693 27101794 -58336686 + MIR3 SINE MIR 92 201 -7 1989 139 14 3 chr17 27101844 27102139 -58336341 + AluSx SINE Alu 1 298 -14 3018 186 65 28 chr17 27103502 27104366 -58334114 + MER52A LTR ERV1 348 1277 -1 2051 127 7 3 chr17 27104744 27105047 -58333433 + AluSq SINE Alu 2 305 0 3065 153 39 50 chr17 27105075 27105749 -58332731 + L1MB4 LINE L1 5514 6179 -1 1762 190 3 7 chr17 27105831 27106120 -58332360 + AluJo SINE Alu 1 288 -24 353 309 132 36 chr17 27106131 27106351 -58332129 + L1MC4 LINE L1 7323 7563 -479 533 302 24 60 chr17 27106354 27106619 -58331861 + L1MC4 LINE L1 7638 7884 -158 258 56 0 0 chr17 27106619 27106655 -58331825 + (TG)n Simple_repeat Simple_repeat 1 36 0 533 302 24 60 chr17 27106655 27106809 -58331671 + L1MC4 LINE L1 7884 8042 0 235 170 57 0 chr17 27107559 27107612 -58330868 - FLAM SINE Alu -8 125 70 * 338 146 0 0 chr17 27107593 27107641 -58330839 - Alu SINE Alu -252 48 1 278 119 0 0 chr17 27107651 27107693 -58330787 + MER116 DNA Mariner 38 79 -1 466 284 38 91 chr17 27108658 27108922 -58329558 + MIR SINE MIR 7 256 -6 193 309 59 0 chr17 27109196 27109264 -58329216 - L2 LINE L2 0 3313 3242 221 262 134 39 chr17 27111878 27112069 -58326411 + MIR SINE MIR 30 241 -21 260 258 30 0 chr17 27112096 27112162 -58326318 + MIR3 SINE MIR 129 196 -12 21 57 0 0 chr17 27112934 27112969 -58325511 + GC_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr17 27113226 27113248 -58325232 + GC_rich Low_complexity Low_complexity 1 22 0 221 220 136 0 chr17 27114366 27114425 -58324055 - L2 LINE L2 -1 3312 3246 367 319 169 10 chr17 27114740 27115047 -58323433 - L2 LINE L2 -610 2704 2349 613 133 0 78 chr17 27115743 27115871 -58322609 - L1MA4 LINE L1 0 6300 6183 248 211 53 0 chr17 27115873 27115930 -58322550 + L1MA4 LINE L1 6130 6189 -111 731 229 120 0 chr17 27116256 27116448 -58322032 - MIR SINE MIR -30 232 18 1083 49 0 0 chr17 27116552 27116675 -58321805 + AluSq/x SINE Alu 10 132 -181 27 29 0 0 chr17 27116675 27116709 -58321771 + AT_rich Low_complexity Low_complexity 1 34 0 206 271 16 16 chr17 27116757 27116833 -58321647 + MIR SINE MIR 41 116 -92 206 321 12 0 chr17 27116831 27116912 -58321568 + MIR SINE MIR 178 259 -3 1989 141 0 21 chr17 27117591 27117768 -58320712 - AluJb SINE Alu -27 285 115 3802 114 52 22 chr17 27117768 27118364 -58320116 + LTR18B LTR ERVL 1 614 0 1989 141 0 21 chr17 27118364 27118477 -58320003 - AluJb SINE Alu -197 115 1 1803 196 21 21 chr17 27118477 27118900 -58319580 - L2 LINE L2 -1607 1707 1285 2180 118 7 7 chr17 27119715 27120021 -58318459 + AluSq SINE Alu 1 306 -7 1963 151 10 6 chr17 27120201 27120512 -58317968 - AluSx SINE Alu 0 312 1 23 78 0 0 chr17 27120642 27120693 -58317787 + AT_rich Low_complexity Low_complexity 1 51 0 1015 244 114 52 chr17 27120757 27121179 -58317301 + LTR16A1 LTR ERVL 10 457 0 1654 167 3 39 chr17 27121320 27121625 -58316855 - AluJb SINE Alu -18 294 1 991 288 53 55 chr17 27121951 27122447 -58316033 - MLT1K LTR MaLR -16 572 63 686 272 102 92 chr17 27122730 27123260 -58315220 + LTR67 LTR ERVL 4 538 -19 241 217 29 29 chr17 27123287 27123356 -58315124 - MIR SINE MIR -111 151 83 2192 124 20 0 chr17 27123884 27124190 -58314290 - AluSx SINE Alu 0 312 1 816 154 0 0 chr17 27124240 27124357 -58314123 + FLAM_C SINE Alu 1 117 -26 27 29 0 0 chr17 27124366 27124400 -58314080 + AT_rich Low_complexity Low_complexity 1 34 0 988 147 28 6 chr17 27124407 27124523 -58313957 + L1MB5 LINE L1 5994 6117 -57 1462 150 4 4 chr17 27124523 27124750 -58313730 - AluJb SINE Alu -85 227 1 988 147 28 6 chr17 27124750 27124810 -58313670 + L1MB5 LINE L1 6117 6174 0 2123 118 3 7 chr17 27126003 27126300 -58312180 + AluSx SINE Alu 2 297 -15 189 0 0 0 chr17 27126302 27126323 -58312157 + (GA)n Simple_repeat Simple_repeat 1 21 0 412 133 0 0 chr17 27126810 27126870 -58311610 + AluS SINE Alu 1 60 -258 366 120 0 0 chr17 27126873 27126923 -58311557 - AluS SINE Alu -236 66 17 228 129 0 0 chr17 27126928 27126959 -58311521 - Alu SINE Alu -270 31 1 2432 97 0 3 chr17 27127027 27127338 -58311142 + AluSg SINE Alu 1 310 0 1531 172 19 22 chr17 27127341 27127443 -58311037 + AluJb SINE Alu 33 134 -178 306 0 0 0 chr17 27127443 27127477 -58311003 + (TAAAA)n Simple_repeat Simple_repeat 3 36 0 1531 172 19 22 chr17 27127477 27127641 -58310839 + AluJb SINE Alu 134 298 -14 871 185 0 62 chr17 27128413 27128591 -58309889 - FRAM SINE Alu -9 167 1 2334 89 3 0 chr17 27128605 27128898 -58309582 - AluSc SINE Alu -15 294 1 1095 296 33 46 chr17 27129620 27129727 -58308753 - HAL1b LINE L1 -598 750 643 2307 111 3 3 chr17 27129727 27130034 -58308446 - AluSx SINE Alu -5 307 1 1095 296 33 46 chr17 27130034 27130421 -58308059 - HAL1b LINE L1 -705 643 263 2493 70 0 7 chr17 27130421 27130722 -58307758 - AluY SINE Alu -12 299 1 1095 296 33 46 chr17 27130722 27130858 -58307622 - HAL1b LINE L1 -1085 263 127 443 300 33 24 chr17 27131121 27131331 -58307149 - MIR SINE MIR 0 262 51 650 154 29 0 chr17 27131592 27131696 -58306784 - U6 snRNA snRNA 0 107 1 244 185 38 147 chr17 27132078 27132159 -58306321 - Charlie7 DNA MER1_type 0 2612 2524 216 0 0 0 chr17 27132159 27132183 -58306297 + (TATTG)n Simple_repeat Simple_repeat 2 25 0 1811 171 0 3 chr17 27132183 27132469 -58306011 - AluJb SINE Alu -27 285 1 244 185 38 147 chr17 27132469 27132543 -58305937 - Charlie7 DNA MER1_type -86 2526 2473 187 171 66 0 chr17 27132550 27132626 -58305854 + (TA)n Simple_repeat Simple_repeat 2 82 0 781 216 186 29 chr17 27132633 27133195 -58305285 - Charlie7 DNA MER1_type -65 2547 1861 1232 69 162 0 chr17 27133205 27133378 -58305102 - L1P LINE L1 -1752 4394 4194 385 193 29 107 chr17 27133378 27133446 -58305034 - Charlie7 DNA MER1_type -770 1842 1789 1498 137 7 121 chr17 27133446 27133752 -58304728 - AluJo SINE Alu -4 308 38 385 193 29 107 chr17 27133752 27133823 -58304657 - Charlie7 DNA MER1_type -823 1789 1714 749 229 17 42 chr17 27133861 27134101 -58304379 - Charlie7 DNA MER1_type -904 1708 1475 21 0 0 0 chr17 27134178 27134199 -58304281 + AT_rich Low_complexity Low_complexity 1 21 0 288 274 144 7 chr17 27134226 27134379 -58304101 - Charlie7 DNA MER1_type -2383 229 56 1983 92 11 26 chr17 27184459 27184732 -58253748 + AluSx SINE Alu 7 275 -37 22 0 0 0 chr17 27184735 27184757 -58253723 + AT_rich Low_complexity Low_complexity 1 22 0 2020 185 138 2 chr17 27184907 27185339 -58253141 + L1MC4 LINE L1 6520 6892 -1150 1776 141 36 0 chr17 27185339 27185616 -58252864 + AluJb SINE Alu 1 287 -25 192 77 0 0 chr17 27185616 27185642 -58252838 + (TGAA)n Simple_repeat Simple_repeat 3 28 0 2020 185 138 2 chr17 27185642 27185678 -58252802 + L1MC4 LINE L1 6891 7053 -989 1640 213 39 16 chr17 27185695 27186239 -58252241 + L1MC4 LINE L1 7165 7833 -95 1901 159 10 22 chr17 27186379 27186693 -58251787 + AluJb SINE Alu 3 312 0 1499 158 96 7 chr17 27187228 27187500 -58250980 + MER1B DNA MER1_type 44 339 0 303 314 10 20 chr17 27187710 27187812 -58250668 + MIR SINE MIR 33 133 -129 21 57 0 0 chr17 27188374 27188409 -58250071 + AT_rich Low_complexity Low_complexity 1 35 0 2360 108 0 0 chr17 27189057 27189362 -58249118 - AluSx SINE Alu -5 307 3 21 36 0 0 chr17 27189491 27189519 -58248961 + AT_rich Low_complexity Low_complexity 1 28 0 2171 121 7 3 chr17 27189622 27189920 -58248560 - AluSq SINE Alu -14 299 1 21 0 0 0 chr17 27190038 27190059 -58248421 + AT_rich Low_complexity Low_complexity 1 21 0 331 230 41 43 chr17 27191439 27191494 -58246986 - L1ME LINE L1 -555 5566 5512 1987 149 7 3 chr17 27191494 27191783 -58246697 + AluSx SINE Alu 2 291 -21 2469 78 0 0 chr17 27191786 27192095 -58246385 + AluY SINE Alu 1 309 -2 331 230 41 43 chr17 27192095 27192192 -58246288 - L1ME LINE L1 -611 5510 5419 383 254 40 0 chr17 27192209 27192335 -58246145 + L1ME LINE L1 4915 5045 -1101 719 138 83 14 chr17 27192336 27192481 -58245999 + MER3 DNA MER1_type 5 159 -50 322 263 136 8 chr17 27192484 27192602 -58245878 + L1ME LINE L1 5152 5284 -862 2297 74 3 0 chr17 27192605 27192913 -58245567 + AluSp SINE Alu 1 309 0 207 0 0 0 chr17 27192962 27192985 -58245495 + (A)n Simple_repeat Simple_repeat 1 23 0 1716 165 33 4 chr17 27192999 27193272 -58245208 + AluJb SINE Alu 11 291 -21 943 211 41 71 chr17 27193323 27193687 -58244793 + L1ME LINE L1 5406 5758 -412 267 281 10 10 chr17 27193936 27194032 -58244448 - MLT1K LTR MaLR 0 588 493 315 0 0 0 chr17 27194032 27194067 -58244413 + (A)n Simple_repeat Simple_repeat 1 35 0 392 296 86 13 chr17 27194260 27194412 -58244068 - MLT1K LTR MaLR -415 173 11 21 0 0 0 chr17 27195450 27195471 -58243009 + AT_rich Low_complexity Low_complexity 1 21 0 29 0 0 25 chr17 27195659 27195682 -58242798 + AT_rich Low_complexity Low_complexity 1 24 -15 1601 211 18 0 chr17 27195682 27195966 -58242514 - AluJo SINE Alu -23 289 1 29 0 0 25 chr17 27195966 27195982 -58242498 + AT_rich Low_complexity Low_complexity 24 39 0 21 36 0 0 chr17 27196148 27196176 -58242304 + AT_rich Low_complexity Low_complexity 1 28 0 221 313 0 50 chr17 27196639 27196821 -58241659 + CT-rich Low_complexity Low_complexity 2 174 0 1998 154 27 0 chr17 27197736 27198034 -58240446 - AluSx SINE Alu -6 306 1 22 0 0 0 chr17 27198040 27198062 -58240418 + AT_rich Low_complexity Low_complexity 1 22 0 529 195 54 87 chr17 27198876 27198991 -58239489 + MER3 DNA MER1_type 31 148 -61 2354 100 0 0 chr17 27198991 27199302 -58239178 - AluY SINE Alu 0 311 1 2128 124 0 0 chr17 27199303 27199593 -58238887 - AluSc SINE Alu -19 290 1 529 195 54 87 chr17 27199593 27199660 -58238820 + MER3 DNA MER1_type 147 209 0 219 108 0 0 chr17 27199882 27199907 -58238573 + (A)n Simple_repeat Simple_repeat 1 28 -9 1351 128 50 157 chr17 27199907 27200042 -58238438 + AluJb SINE Alu 2 150 -152 2270 115 3 10 chr17 27200042 27200355 -58238125 + AluSx SINE Alu 1 311 -1 1351 128 50 157 chr17 27200355 27200556 -58237924 + AluJb SINE Alu 150 302 0 219 108 0 0 chr17 27200556 27200567 -58237913 + (A)n Simple_repeat Simple_repeat 27 37 0 837 199 65 16 chr17 27201151 27201337 -58237143 + MER58A DNA MER1_type 1 195 -29 248 26 154 0 chr17 27201382 27201421 -58237059 + MER58A DNA MER1_type 175 219 -5 2056 121 7 0 chr17 27201500 27201781 -58236699 + AluSx SINE Alu 5 287 -25 1994 139 14 0 chr17 27201815 27202103 -58236377 + AluJb SINE Alu 1 292 -20 25 51 0 0 chr17 27202893 27202932 -58235548 + AT_rich Low_complexity Low_complexity 1 39 0 692 275 106 18 chr17 27204018 27204236 -58234244 + MIR SINE MIR 26 262 0 1974 129 0 23 chr17 27204562 27204865 -58233615 - AluJb SINE Alu -15 297 2 1972 130 0 33 chr17 27205324 27205625 -58232855 - AluSg SINE Alu -19 291 1 282 191 22 22 chr17 27205719 27205808 -58232672 + L1M4 LINE L1 2474 2562 -3584 229 50 25 25 chr17 27205810 27205850 -58232630 + (CAAAA)n Simple_repeat Simple_repeat 4 43 0 1216 119 0 32 chr17 27205917 27206102 -58232378 - AluSg/x SINE Alu -9 303 125 755 247 68 27 chr17 27206103 27206242 -58232238 + L1M4 LINE L1 2678 2810 -3336 1478 149 114 21 chr17 27206242 27206563 -58231917 + AluSx SINE Alu 1 312 0 755 247 68 27 chr17 27206563 27206906 -58231574 + L1M4 LINE L1 2810 3171 -2975 266 290 0 11 chr17 27207145 27207238 -58231242 - L1M4 LINE L1 -2285 3861 3770 324 315 74 0 chr17 27207271 27207420 -58231060 + L1M4 LINE L1 3952 4111 -2035 344 280 21 21 chr17 27207830 27207923 -58230557 + MIR3 SINE MIR 82 174 -34 856 316 17 0 chr17 27208098 27208335 -58230145 + MIR SINE MIR 8 248 -14 193 333 105 19 chr17 27208508 27208613 -58229867 + MIR SINE MIR 38 151 -57 2051 122 0 0 chr17 27208683 27208979 -58229501 + AluSx SINE Alu 1 296 -16 1063 177 105 5 chr17 27209464 27209673 -58228807 - MER46A DNA MER2_type -6 230 1 255 259 0 129 chr17 27209886 27209935 -58228545 + MIR3 SINE MIR 100 154 -54 438 20 0 0 chr17 27209935 27209986 -58228494 + (GA)n Simple_repeat Simple_repeat 1 51 0 297 0 0 0 chr17 27209985 27210018 -58228462 + (TG)n Simple_repeat Simple_repeat 1 33 0 * 255 259 0 129 chr17 27209986 27210084 -58228396 + MIR3 SINE MIR 154 200 -8 2077 119 0 3 chr17 27210346 27210648 -58227832 + AluSx SINE Alu 1 301 -11 3579 207 69 9 chr17 27210857 27211757 -58226723 + L1MA9 LINE L1 5353 6291 -21 310 132 118 40 chr17 27211762 27211838 -58226642 + L1MB7 LINE L1 6089 6170 -14 428 143 44 55 chr17 27211872 27211963 -58226517 + L1MC1 LINE L1 6235 6324 -9 22 35 0 0 chr17 27212172 27212201 -58226279 + AT_rich Low_complexity Low_complexity 1 29 0 234 203 89 51 chr17 27212278 27212357 -58226123 - MIR SINE MIR 0 262 181 433 286 64 41 chr17 27214489 27214660 -58223820 - MER91A DNA MER1_type 0 196 22 1033 146 0 12 chr17 27215588 27215753 -58222727 - FRAM SINE Alu -15 161 1 382 190 26 60 chr17 27216362 27216478 -58222002 - MER103 DNA DNA -19 147 36 1976 113 0 14 chr17 27216478 27216771 -58221709 - AluSx SINE Alu -23 289 1 235 204 0 19 chr17 27216771 27216825 -58221655 - MER103 DNA DNA -106 60 8 198 146 42 21 chr17 27216906 27216954 -58221526 - MIR SINE MIR -65 143 95 1684 143 57 4 chr17 27217512 27217791 -58220689 + AluJo SINE Alu 1 294 -18 1252 130 0 0 chr17 27217935 27218112 -58220368 - AluSx SINE Alu -135 177 1 22 0 0 0 chr17 27219903 27219925 -58218555 + AT_rich Low_complexity Low_complexity 1 22 0 800 197 68 44 chr17 27220662 27220968 -58217512 - MER96B DNA MER1_type? -27 390 20 189 0 0 0 chr17 27221021 27221042 -58217438 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 250 210 90 40 chr17 27221163 27221263 -58217217 + L1MEd LINE L1 2 106 -6013 248 0 31 0 chr17 27221602 27221634 -58216846 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 1056 116 0 0 chr17 27221649 27221795 -58216685 - AluSq/x SINE Alu -167 146 1 189 132 0 0 chr17 27221921 27221959 -58216521 + (A)n Simple_repeat Simple_repeat 1 38 0 202 308 0 0 chr17 27222330 27222382 -58216098 + MIR SINE MIR 79 130 -78 348 292 42 35 chr17 27222387 27222398 -58216082 + MIR SINE MIR 108 117 -145 2205 74 50 7 chr17 27222398 27222696 -58215784 - AluSx SINE Alu -1 311 1 348 292 42 35 chr17 27222696 27222828 -58215652 + MIR SINE MIR 117 252 -10 769 227 23 32 chr17 27222863 27223079 -58215401 + L1ME3A LINE L1 5945 6158 -12 1616 121 121 11 chr17 27223082 27223347 -58215133 - AluSg SINE Alu -16 294 1 207 276 0 0 chr17 27223795 27223853 -58214627 + (TGGA)n Simple_repeat Simple_repeat 2 59 0 216 0 0 0 chr17 27224268 27224292 -58214188 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2164 98 0 43 chr17 27224367 27224693 -58213787 - AluSx SINE Alu 0 312 1 1811 91 102 4 chr17 27225081 27225356 -58213124 + AluSx SINE Alu 1 302 -10 1345 161 14 0 chr17 27228093 27228304 -58210176 - AluJb SINE Alu -25 287 74 1755 102 0 0 chr17 27228986 27229231 -58209249 - AluSg/x SINE Alu -2 310 66 1854 155 0 0 chr17 27229428 27229736 -58208744 - AluJb SINE Alu 0 308 1 416 77 0 0 chr17 27229831 27229883 -58208597 + Alu SINE Alu 2 53 -257 239 102 0 0 chr17 27230008 27230057 -58208423 + Alu SINE Alu 255 303 0 2309 66 13 3 chr17 27230239 27230543 -58207937 - AluY SINE Alu 0 311 5 998 104 17 6 chr17 27230547 27230720 -58207760 + (TTTC)n Simple_repeat Simple_repeat 4 178 0 1617 130 91 0 chr17 27230720 27230974 -58207506 - AluSx SINE Alu -35 277 1 361 63 63 0 chr17 27231883 27231946 -58206534 + G-rich Low_complexity Low_complexity 2 68 0 1752 153 47 7 chr17 27232292 27232471 -58206009 - AluSq SINE Alu 0 313 116 210 37 0 0 chr17 27232471 27232498 -58205982 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1752 153 47 7 chr17 27232498 27232619 -58205861 - AluSq SINE Alu -197 116 1 292 353 81 0 chr17 27234767 27234903 -58203577 + MIR3 SINE MIR 6 152 -56 375 228 59 40 chr17 27234944 27235045 -58203435 + MER5A DNA MER1_type 65 167 -22 206 257 71 62 chr17 27234948 27235061 -58203419 - MER5A DNA MER1_type -57 132 19 * 186 261 130 0 chr17 27236064 27236133 -58202347 - L2 LINE L2 -56 3257 3180 2372 86 0 0 chr17 27236588 27236892 -58201588 - AluSx SINE Alu -7 305 2 379 176 0 93 chr17 27237002 27237195 -58201285 + (CAGCC)n Simple_repeat Simple_repeat 1 175 0 2065 111 10 0 chr17 27239837 27240134 -58198346 - AluSx SINE Alu -12 300 1 25 0 0 0 chr17 27240617 27240642 -58197838 + AT_rich Low_complexity Low_complexity 1 25 0 2136 121 0 0 chr17 27242034 27242347 -58196133 + AluSq SINE Alu 1 313 0 1051 139 52 0 chr17 27242347 27242519 -58195961 + AluSg/x SINE Alu 130 310 0 190 214 24 0 chr17 27242519 27242561 -58195919 - L2 LINE L2 -79 3193 3151 1896 148 0 6 chr17 27243065 27243080 -58195400 - AluJb SINE Alu -3 309 295 228 35 0 0 chr17 27243080 27243109 -58195371 + (TG)n Simple_repeat Simple_repeat 2 30 0 1896 148 0 6 chr17 27243109 27243404 -58195076 - AluJb SINE Alu -17 295 1 653 263 67 10 chr17 27243782 27243976 -58194504 + MIR SINE MIR 46 250 -12 323 270 57 21 chr17 27244126 27244253 -58194227 - MER5A DNA MER1_type -5 173 30 285 98 0 0 chr17 27245484 27245525 -58192955 + (TG)n Simple_repeat Simple_repeat 2 42 0 822 231 65 10 chr17 27245542 27245741 -58192739 + MER63A DNA MER1_type 1 210 0 1897 118 49 0 chr17 27245948 27246236 -58192244 + AluSx SINE Alu 1 302 -10 654 195 5 125 chr17 27246608 27246808 -58191672 - MER69A DNA AcHobo -1 176 1 355 289 125 0 chr17 27247401 27247529 -58190951 + MIR SINE MIR 113 256 -6 2173 84 0 7 chr17 27247534 27247848 -58190632 + AluSx SINE Alu 1 312 0 321 89 0 0 chr17 27248019 27248064 -58190416 + (CA)n Simple_repeat Simple_repeat 2 46 0 476 240 31 39 chr17 27248175 27248304 -58190176 + MIR3 SINE MIR 34 161 -47 650 155 5 136 chr17 27248310 27248523 -58189957 - MER53 DNA DNA -4 185 1 1695 164 14 0 chr17 27248640 27249094 -58189386 + AluSx SINE Alu 1 458 0 189 0 0 0 chr17 27249111 27249132 -58189348 + (CAG)n Simple_repeat Simple_repeat 2 22 0 2135 98 24 0 chr17 27249172 27249469 -58189011 + AluSg1 SINE Alu 1 304 -5 185 370 37 12 chr17 27249854 27249935 -58188545 + MER5A DNA MER1_type 4 86 -103 1735 132 26 45 chr17 27250069 27250380 -58188100 - AluJb SINE Alu -7 305 1 557 227 31 16 chr17 27250839 27250967 -58187513 + MER91B DNA MER1_type 48 177 -13 298 265 73 0 chr17 27250975 27251043 -58187437 + L2 LINE L2 3237 3309 -4 655 276 57 11 chr17 27251073 27251337 -58187143 - L1MC4 LINE L1 -26 8016 7741 796 268 140 24 chr17 27251468 27251718 -58186762 + LTR16C LTR ERVL 125 423 -68 1970 131 0 13 chr17 27251718 27252024 -58186456 - AluSx SINE Alu -10 302 1 796 268 140 24 chr17 27252024 27252102 -58186378 + LTR16C LTR ERVL 423 491 0 725 266 85 11 chr17 27252295 27252483 -58185997 - MIR SINE MIR 0 262 61 837 213 107 40 chr17 27252666 27252919 -58185561 + AluSp SINE Alu 44 313 0 2169 97 3 40 chr17 27253986 27254307 -58184173 - AluSx SINE Alu -3 309 1 545 256 174 43 chr17 27254358 27254594 -58183886 + MIR SINE MIR 2 258 -4 2254 73 7 13 chr17 27255567 27255869 -58182611 + AluY SINE Alu 1 300 -11 326 162 68 60 chr17 27256064 27256181 -58182299 - L1ME4a LINE L1 -2 6119 6002 2174 91 7 7 chr17 27256244 27256541 -58181939 - AluSq SINE Alu -16 297 1 226 180 16 49 chr17 27257084 27257145 -58181335 + (TATATG)n Simple_repeat Simple_repeat 1 59 0 522 203 20 81 chr17 27257274 27257359 -58181121 + MER5B DNA MER1_type 38 112 -66 1621 164 24 47 chr17 27257359 27257657 -58180823 - AluJo SINE Alu -21 291 1 522 203 20 81 chr17 27257657 27257719 -58180761 + MER5B DNA MER1_type 112 176 -2 386 252 26 33 chr17 27257734 27257885 -58180595 - L1ME4a LINE L1 -238 5883 5734 353 203 173 3 chr17 27258282 27258391 -58180089 - L1ME4a LINE L1 -536 5585 5458 2210 102 0 40 chr17 27258400 27258779 -58179701 - AluSx SINE Alu 0 366 1 327 279 29 15 chr17 27258857 27258993 -58179487 - L1P LINE L1 -797 5349 5212 1998 148 3 3 chr17 27259117 27259415 -58179065 + AluSx SINE Alu 1 298 -14 1100 159 0 70 chr17 27259674 27259908 -58178572 + AluJo SINE Alu 96 315 0 1494 142 0 0 chr17 27260023 27260235 -58178245 - AluJb SINE Alu -17 295 84 306 0 0 0 chr17 27260373 27260407 -58178073 + (TG)n Simple_repeat Simple_repeat 2 35 0 656 294 106 33 chr17 27260542 27260937 -58177543 + L1MC4a LINE L1 5461 5884 -280 232 157 84 60 chr17 27260998 27261081 -58177399 + L1ME4a LINE L1 5933 6017 -104 340 320 120 10 chr17 27261803 27262003 -58176477 - MIR SINE MIR -40 222 1 250 250 0 0 chr17 27262212 27262264 -58176216 + L2 LINE L2 3262 3313 0 205 261 0 62 chr17 27262652 27262717 -58175763 + L2 LINE L2 3210 3270 -2 1722 169 23 19 chr17 27264250 27264557 -58173923 - AluJo SINE Alu 0 312 5 2173 109 10 10 chr17 27264650 27264961 -58173519 + AluSq SINE Alu 1 311 -2 1786 174 3 0 chr17 27265322 27265609 -58172871 + AluJb SINE Alu 1 288 -24 531 245 63 63 chr17 27265808 27265951 -58172529 + L2 LINE L2 3123 3265 -7 885 198 10 78 chr17 27266120 27266155 -58172325 - FAM SINE Alu -142 43 7 878 168 0 0 chr17 27266155 27266286 -58172194 + FLAM_C SINE Alu 2 132 -1 2125 135 0 0 chr17 27266292 27266588 -58171892 + AluSx SINE Alu 1 296 -16 885 198 10 78 chr17 27266588 27266737 -58171743 - FAM SINE Alu -26 159 1 2083 129 0 3 chr17 27267114 27267408 -58171072 + AluSg SINE Alu 1 293 -17 483 258 36 93 chr17 27267957 27267996 -58170484 + MIR SINE MIR 51 91 -171 1914 121 0 76 chr17 27267996 27268326 -58170154 - AluSx SINE Alu -7 305 1 483 258 36 93 chr17 27268326 27268511 -58169969 + MIR SINE MIR 91 262 0 2075 142 7 0 chr17 27269365 27269668 -58168812 - AluJb SINE Alu -7 305 1 2131 129 0 3 chr17 27269676 27269979 -58168501 - AluSx SINE Alu -10 302 1 1902 138 34 0 chr17 27271188 27271479 -58167001 + AluSx SINE Alu 2 302 -10 350 231 218 48 chr17 27272465 27272612 -58165868 + MIR3 SINE MIR 30 201 -7 30 0 0 0 chr17 27273208 27273238 -58165242 + AT_rich Low_complexity Low_complexity 1 30 0 2000 127 7 0 chr17 27273242 27273525 -58164955 + AluSx SINE Alu 3 287 -25 2006 127 3 7 chr17 27273534 27273818 -58164662 + AluSq SINE Alu 1 283 -30 24 71 0 0 chr17 27273829 27273857 -58164623 + AT_rich Low_complexity Low_complexity 1 28 0 460 217 178 7 chr17 27274258 27274337 -58164143 - Charlie8 DNA MER1_type -65 265 201 2233 127 13 0 chr17 27274337 27274645 -58163835 - AluSx SINE Alu 0 312 1 460 217 178 7 chr17 27274645 27274717 -58163763 - Charlie8 DNA MER1_type -129 201 88 223 323 161 0 chr17 27274952 27275076 -58163404 - MIR SINE MIR -73 189 46 188 331 62 62 chr17 27275396 27275526 -58162954 - MIR SINE MIR -36 226 97 300 188 0 0 chr17 27275812 27275876 -58162604 + (CATATA)n Simple_repeat Simple_repeat 3 66 0 317 265 24 0 chr17 27275896 27275979 -58162501 - L1MC4 LINE L1 -1350 6692 6608 480 267 22 30 chr17 27276169 27276304 -58162176 - MIR SINE MIR -56 206 73 715 264 78 30 chr17 27276567 27276798 -58161682 - MIR SINE MIR -19 243 2 1220 188 0 26 chr17 27276918 27276991 -58161489 + AluJo SINE Alu 66 139 -173 2156 113 0 0 chr17 27276991 27277301 -58161179 + AluSx SINE Alu 1 310 0 1220 188 0 26 chr17 27277301 27277455 -58161025 + AluJo SINE Alu 139 288 -24 229 336 126 28 chr17 27278100 27278243 -58160237 + MIR3 SINE MIR 43 199 -9 1302 160 13 4 chr17 27278272 27278497 -58159983 + AluJb SINE Alu 5 231 -81 1258 117 6 6 chr17 27278533 27278712 -58159768 + AluSg/x SINE Alu 122 300 -12 1902 132 21 7 chr17 27279025 27279312 -58159168 - AluSx SINE Alu -21 291 1 1924 127 6 41 chr17 27279711 27280025 -58158455 - AluJb SINE Alu -9 303 1 985 244 0 42 chr17 27280043 27280281 -58158199 + MIR SINE MIR 31 258 -4 214 148 66 49 chr17 27280282 27280343 -58158137 - MIR SINE MIR -101 161 100 567 43 0 0 chr17 27280521 27280591 -58157889 + (TTTC)n Simple_repeat Simple_repeat 1 70 0 2257 104 0 0 chr17 27280866 27281164 -58157316 + AluSx SINE Alu 1 298 -14 2378 79 3 10 chr17 27281770 27282073 -58156407 + AluY SINE Alu 1 301 -10 1986 84 30 4 chr17 27282084 27282346 -58156134 + AluSg SINE Alu 30 298 -12 314 306 61 50 chr17 27282346 27282526 -58155954 + L2 LINE L2 2931 3112 -160 275 278 30 95 chr17 27282564 27282623 -58155857 + L2 LINE L2 2521 2582 -732 2065 101 13 32 chr17 27282623 27282939 -58155541 - AluSx SINE Alu -2 310 1 275 278 30 95 chr17 27282939 27283048 -58155432 + L2 LINE L2 2582 2678 -636 1919 105 73 0 chr17 27283048 27283334 -58155146 - AluSx SINE Alu -5 307 1 2063 134 3 0 chr17 27283504 27283802 -58154678 + AluSg SINE Alu 6 304 -6 2430 97 0 0 chr17 27283937 27284246 -58154234 + AluSc SINE Alu 1 309 0 227 261 75 52 chr17 27284395 27284529 -58153951 - L1ME LINE L1 -377 5785 5649 929 187 53 21 chr17 27284530 27284717 -58153763 + MER3 DNA MER1_type 12 204 -5 462 320 8 0 chr17 27284727 27284855 -58153625 - L1ME LINE L1 -519 5651 5523 3754 138 30 8 chr17 27284918 27285257 -58153223 + MER41B LTR ERV1 2 361 -274 2205 77 0 67 chr17 27285257 27285570 -58152910 + AluSg SINE Alu 1 292 -18 3754 138 30 8 chr17 27285570 27285840 -58152640 + MER41B LTR ERV1 361 624 -11 425 160 34 17 chr17 27285885 27286004 -58152476 - L1ME LINE L1 -973 5386 5266 24 0 0 0 chr17 27286022 27286046 -58152434 + AT_rich Low_complexity Low_complexity 1 24 0 206 267 178 0 chr17 27286072 27286162 -58152318 + L2 LINE L2 2687 2792 -522 401 282 29 0 chr17 27286279 27286382 -58152098 + MLT1L LTR MaLR 163 268 -347 3753 129 45 72 chr17 27286450 27287184 -58151296 + LTR8A LTR ERV1 1 714 -13 604 281 132 17 chr17 27287229 27287524 -58150956 + L2 LINE L2 2966 3294 -19 888 150 0 0 chr17 27287524 27287657 -58150823 - AluSq/x SINE Alu -180 133 1 404 263 80 7 chr17 27287693 27287830 -58150650 + L2 LINE L2 3167 3313 0 288 289 24 12 chr17 27288437 27288520 -58149960 + L2 LINE L2 2886 2969 -303 1207 173 15 0 chr17 27289111 27289313 -58149167 - AluSq SINE Alu -4 309 105 3538 201 139 53 chr17 27289313 27290354 -58148126 - LTR28 LTR ERV1 0 1755 2 627 141 91 0 chr17 27290354 27290453 -58148027 - AluJb SINE Alu -203 109 2 345 270 31 68 chr17 27290466 27290540 -58147940 - Charlie8 DNA MER1_type -184 157 82 1674 161 39 4 chr17 27290540 27290819 -58147661 - AluJb SINE Alu -23 289 1 345 270 31 68 chr17 27290819 27290907 -58147573 - Charlie8 DNA MER1_type -259 82 1 2338 99 0 3 chr17 27291093 27291396 -58147084 + AluSq SINE Alu 1 302 -11 1200 145 0 141 chr17 27291599 27291868 -58146612 - AluJo SINE Alu -61 251 21 405 265 197 16 chr17 27292430 27292679 -58145801 + L2 LINE L2 1827 2120 -1194 680 251 25 69 chr17 27292687 27292737 -58145743 - MER91A DNA MER1_type 0 196 145 2300 99 3 0 chr17 27292737 27293031 -58145449 + AluSg SINE Alu 1 295 -15 680 251 25 69 chr17 27293031 27293183 -58145297 - MER91A DNA MER1_type -51 145 3 280 369 15 42 chr17 27293241 27293504 -58144976 + L2 LINE L2 2224 2479 -835 307 298 70 121 chr17 27293756 27294169 -58144311 + L2 LINE L2 2868 3259 -13 243 0 0 0 chr17 27295457 27295484 -58142996 + (CCG)n Simple_repeat Simple_repeat 1 27 0 260 176 44 29 chr17 27296886 27296954 -58141526 + L1ME1 LINE L1 6093 6161 -5 25 0 0 0 chr17 27298305 27298330 -58140150 + AT_rich Low_complexity Low_complexity 1 25 0 1936 148 10 7 chr17 27298450 27298754 -58139726 - AluSx SINE Alu -7 305 1 1877 128 43 0 chr17 27298800 27299081 -58139399 + AluJb SINE Alu 11 303 -9 596 217 9 0 chr17 27299258 27299364 -58139116 + U6 snRNA snRNA 1 107 0 231 147 0 0 chr17 27300012 27300046 -58138434 - U2 snRNA snRNA -153 35 2 1008 200 96 0 chr17 27300180 27300400 -58138080 + AluJo SINE Alu 68 308 -4 21 36 0 0 chr17 27300772 27300800 -58137680 + AT_rich Low_complexity Low_complexity 1 28 0 323 345 134 39 chr17 27302315 27302599 -58135881 - L2 LINE L2 -50 3222 2912 254 312 128 0 chr17 27303048 27303173 -58135307 + MIR SINE MIR 2 142 -120 230 276 35 0 chr17 27303172 27303230 -58135250 + L2 LINE L2 3254 3313 0 * 606 247 145 31 chr17 27303306 27303533 -58134947 + MIR SINE MIR 7 259 -3 2346 93 3 3 chr17 27303618 27303919 -58134561 + AluSc SINE Alu 1 301 -8 1320 191 39 39 chr17 27304276 27304558 -58133922 - AluJo SINE Alu -30 282 1 1730 163 27 7 chr17 27304924 27305218 -58133262 + AluSx SINE Alu 5 304 -8 598 187 41 65 chr17 27305244 27305367 -58133113 + FLAM_A SINE Alu 1 120 -13 195 269 15 60 chr17 27305498 27305565 -58132915 + MER5B DNA MER1_type 66 129 -49 835 119 8 8 chr17 27305647 27305765 -58132715 + FRAM SINE Alu 41 158 -18 319 243 0 0 chr17 27305768 27305838 -58132642 - L2 LINE L2 -770 2544 2475 336 208 236 28 chr17 27306016 27306122 -58132358 - MER5A DNA MER1_type -1 188 61 234 116 0 0 chr17 27306328 27306371 -58132109 + (A)n Simple_repeat Simple_repeat 1 43 0 1834 169 0 10 chr17 27306660 27306961 -58131519 + AluJo SINE Alu 1 298 -14 991 188 0 0 chr17 27307617 27307782 -58130698 - AluJb SINE Alu -11 301 137 1853 144 22 4 chr17 27308473 27308750 -58129730 + AluSx SINE Alu 1 282 -30 449 304 101 9 chr17 27308779 27309006 -58129474 - L2 LINE L2 -9 3304 3057 27 49 0 0 chr17 27309532 27309573 -58128907 + AT_rich Low_complexity Low_complexity 1 41 0 1060 223 50 37 chr17 27310379 27310679 -58127801 + L1ME3 LINE L1 5794 6097 -65 460 269 10 0 chr17 27311065 27311169 -58127311 + MIR SINE MIR 47 151 -111 325 304 22 0 chr17 27311312 27311404 -58127076 + MIR SINE MIR 47 140 -122 2137 117 14 0 chr17 27311737 27311904 -58126576 - AluSg SINE Alu -15 295 121 246 32 0 0 chr17 27311904 27311935 -58126545 + (TTTTG)n Simple_repeat Simple_repeat 5 35 0 2137 117 14 0 chr17 27311935 27312058 -58126422 - AluSg SINE Alu -189 121 1 1105 163 0 6 chr17 27312205 27312383 -58126097 - AluJb SINE Alu -16 296 120 311 75 0 0 chr17 27312400 27312440 -58126040 - MER4E LTR ERV1 -74 692 653 1964 154 10 0 chr17 27312444 27312737 -58125743 - AluJb SINE Alu -16 296 1 2469 86 0 0 chr17 27313970 27314271 -58124209 + AluSx SINE Alu 1 301 -11 21 0 0 0 chr17 27315635 27315656 -58122824 + AT_rich Low_complexity Low_complexity 1 21 0 2211 119 0 7 chr17 27316916 27317218 -58121262 - AluSx SINE Alu -12 300 1 1932 115 38 45 chr17 27318042 27318356 -58120124 - AluSx SINE Alu 0 312 1 2490 71 10 0 chr17 27320557 27320865 -58117615 - AluY SINE Alu 0 311 1 260 194 224 10 chr17 27321098 27321196 -58117284 - L1ME4a LINE L1 -19 6102 5984 30 27 0 0 chr17 27323744 27323781 -58114699 + AT_rich Low_complexity Low_complexity 1 37 0 399 270 30 0 chr17 27323853 27323953 -58114527 - MIR SINE MIR -157 105 3 2484 71 3 3 chr17 27324284 27324595 -58113885 - AluY SINE Alu 0 311 1 298 243 10 29 chr17 27324608 27324711 -58113769 - L1MC5 LINE L1 -30 7931 7831 219 69 0 0 chr17 27326199 27326228 -58112252 + (TTG)n Simple_repeat Simple_repeat 2 30 0 2074 99 3 18 chr17 27326228 27326511 -58111969 - AluSx SINE Alu -33 279 1 870 219 24 5 chr17 27326844 27327049 -58111431 + MIR SINE MIR 8 216 -46 801 200 0 0 chr17 27328976 27329106 -58109374 + FLAM_A SINE Alu 1 130 -3 790 243 115 15 chr17 27329518 27329938 -58108542 - L1MC4a LINE L1 -349 5814 5670 181 188 0 0 chr17 27329938 27329970 -58108510 + L2 LINE L2 3265 3296 -17 400 186 24 97 chr17 27329970 27330094 -58108386 - L1MC4a LINE L1 -2113 5695 5581 200 233 0 0 chr17 27330341 27330384 -58108096 + T-rich Low_complexity Low_complexity 1 43 0 2177 117 0 3 chr17 27330478 27330777 -58107703 + AluSx SINE Alu 1 298 -14 1598 188 22 0 chr17 27330921 27331197 -58107283 + AluJo SINE Alu 1 282 -30 2283 84 3 3 chr17 27331203 27331490 -58106990 - AluSg SINE Alu -22 288 2 225 289 13 0 chr17 27331503 27331579 -58106901 + L1ME LINE L1 5315 5391 -771 29 28 0 0 chr17 27331650 27331686 -58106794 + AT_rich Low_complexity Low_complexity 1 36 0 1237 125 184 0 chr17 27331686 27331972 -58106508 - Tigger3(Golem) DNA MER2_type -7 3022 6 373 206 109 0 chr17 27331991 27332083 -58106397 + L1ME LINE L1 5670 5771 -350 389 188 29 0 chr17 27334460 27334529 -58103951 - AluSc SINE Alu -21 278 208 972 147 0 0 chr17 27334550 27334693 -58103787 - FLAM_C SINE Alu 0 143 1 276 213 164 0 chr17 27334908 27334969 -58103511 + Charlie1 DNA MER1_type 1 71 -2690 1558 170 95 11 chr17 27334981 27335351 -58103129 + Charlie1 DNA MER1_type 2360 2760 -1 6015 111 44 10 chr17 27335863 27336698 -58101782 - L1PB2 LINE L1 0 6151 5274 183 100 0 0 chr17 27336698 27336728 -58101752 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 6015 111 44 10 chr17 27336728 27337065 -58101415 - L1PB2 LINE L1 -877 5274 4950 249 305 62 51 chr17 27337615 27337835 -58100645 + MIR SINE MIR 5 216 -46 455 322 134 22 chr17 27339451 27339905 -58098575 + L1MEc LINE L1 1948 2452 -3944 745 228 125 115 chr17 27340020 27340692 -58097788 + L1MEc LINE L1 2420 3098 -3117 882 263 122 24 chr17 27341007 27341376 -58097104 + HAL1 LINE L1 67 471 -2036 317 227 303 8 chr17 27341406 27341538 -58096942 + HAL1 LINE L1 545 715 -1792 280 227 280 8 chr17 27341549 27341681 -58096799 + L1MEc LINE L1 3702 3869 -2346 1809 129 32 58 chr17 27342417 27342727 -58095753 - AluSx SINE Alu -10 302 1 487 269 106 82 chr17 27343140 27343594 -58094886 + L2 LINE L2 2814 3278 -35 198 250 0 0 chr17 27343965 27344013 -58094467 + MIR SINE MIR 81 128 -134 2039 85 4 4 chr17 27344050 27344309 -58094171 + AluSc SINE Alu 35 293 -16 245 216 14 54 chr17 27345186 27345260 -58093220 + CT-rich Low_complexity Low_complexity 3 73 0 385 285 16 16 chr17 27345484 27345607 -58092873 - L1MC4a LINE L1 -1909 5899 5777 426 183 15 99 chr17 27346055 27346150 -58092330 + LTR2 LTR ERV1 42 126 -323 2277 65 18 0 chr17 27346150 27346465 -58092015 + AluY SINE Alu 1 320 0 426 183 15 99 chr17 27346465 27346499 -58091981 + LTR2 LTR ERV1 126 161 -288 1565 195 48 6 chr17 27346603 27346916 -58091564 + LTR2 LTR ERV1 124 449 0 207 227 55 82 chr17 27349194 27349304 -58089176 - MIR SINE MIR -109 153 47 1433 118 26 31 chr17 27350586 27350815 -58087665 - AluJb SINE Alu -53 259 32 180 111 0 0 chr17 27352823 27352850 -58085630 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 496 203 0 37 chr17 27355692 27355879 -58082601 + (TA)n Simple_repeat Simple_repeat 1 180 0 695 233 35 20 chr17 27355941 27356143 -58082337 - L1MC4 LINE L1 -150 7892 7688 186 71 0 0 chr17 27356438 27356466 -58082014 + (CACCT)n Simple_repeat Simple_repeat 3 30 0 2113 103 14 3 chr17 27557183 27557475 -57881005 - AluSq SINE Alu -18 295 1 442 68 34 0 chr17 27557509 27557568 -57880912 + Alu SINE Alu 2 62 -249 1451 191 86 27 chr17 27557575 27557975 -57880505 + L1 LINE L1 4904 5330 -816 1379 196 53 18 chr17 27557975 27558260 -57880220 + AluJo SINE Alu 1 295 -17 654 181 109 0 chr17 27558269 27558407 -57880073 + L1MC1 LINE L1 6174 6326 -7 318 152 0 15 chr17 27558414 27558480 -57880000 + L1MC1 LINE L1 5817 5881 -452 549 188 10 0 chr17 27558491 27558592 -57879888 + MSTD LTR MaLR 1 102 -294 1842 136 27 7 chr17 27559038 27559339 -57879141 + AluSx SINE Alu 1 307 -5 315 160 40 40 chr17 27559765 27559840 -57878640 + L1ME4a LINE L1 6046 6120 -1 1280 181 96 0 chr17 27560506 27560777 -57877703 + MSTD LTR MaLR 100 396 0 2121 135 49 94 chr17 27560777 27561243 -57877237 + L1MC1 LINE L1 5884 6328 -5 2024 127 3 3 chr17 27561248 27561540 -57876940 + AluSx SINE Alu 1 292 -20 1709 129 0 0 chr17 27561582 27561830 -57876650 + AluSg SINE Alu 62 309 -1 697 228 119 32 chr17 27562045 27562264 -57876216 - L2 LINE L2 0 3313 3076 2140 91 0 30 chr17 27562270 27562567 -57875913 - AluSc SINE Alu -21 288 1 910 81 0 0 chr17 27562587 27562710 -57875770 - AluY SINE Alu -2 309 187 222 37 0 0 chr17 27563056 27563083 -57875397 + (TG)n Simple_repeat Simple_repeat 2 28 0 2244 84 0 0 chr17 27563083 27563367 -57875113 - AluSx SINE Alu -27 285 2 1121 226 88 32 chr17 27563368 27563553 -57874927 - L1MC5 LINE L1 -462 7499 7326 387 0 0 0 chr17 27563553 27563596 -57874884 + (TAGA)n Simple_repeat Simple_repeat 4 46 0 189 0 0 0 chr17 27563595 27563616 -57874864 + (CA)n Simple_repeat Simple_repeat 2 22 0 * 1121 226 88 32 chr17 27563596 27563837 -57874643 - L1MC5 LINE L1 -635 7326 7070 339 309 59 7 chr17 27563837 27563973 -57874507 - MIR3 SINE MIR -29 179 37 266 228 158 44 chr17 27563997 27564111 -57874369 + MIR SINE MIR 24 150 -112 489 242 65 8 chr17 27564382 27564506 -57873974 - MER45A DNA AcHobo -44 134 4 231 236 56 0 chr17 27564578 27564650 -57873830 - MLT1K LTR MaLR 0 588 513 1473 167 110 3 chr17 27564748 27565030 -57873450 + AluJb SINE Alu 1 312 0 1665 156 30 0 chr17 27565043 27565312 -57873168 + AluJo SINE Alu 3 279 -33 189 0 0 0 chr17 27565312 27565333 -57873147 + (CAAT)n Simple_repeat Simple_repeat 3 23 0 904 54 31 16 chr17 27565394 27565523 -57872957 + AluY SINE Alu 1 131 -180 1128 101 0 6 chr17 27565634 27565792 -57872688 + AluYa5 SINE Alu 145 301 -10 2132 95 3 7 chr17 27565917 27566212 -57872268 - AluSx SINE Alu -18 294 1 392 242 36 68 chr17 27566274 27566522 -57871958 + HAL1 LINE L1 2222 2461 -46 1178 209 0 4 chr17 27566528 27566758 -57871722 + MER46A DNA MER2_type 8 236 0 2079 114 17 0 chr17 27566940 27567238 -57871242 - AluSq SINE Alu -10 303 1 275 260 190 40 chr17 27567297 27567497 -57870983 - MLT1K LTR MaLR -349 239 10 199 274 39 0 chr17 27567790 27567841 -57870639 + MIR SINE MIR 91 143 -65 287 257 143 0 chr17 27568442 27568547 -57869933 - L2 LINE L2 0 3313 3194 1067 289 80 54 chr17 27568681 27569166 -57869314 - MLT1K LTR MaLR 0 588 91 189 303 32 103 chr17 27569240 27569395 -57869085 - MIR SINE MIR -60 202 59 777 142 0 0 chr17 27569607 27569720 -57868760 + FLAM_C SINE Alu 6 118 -25 264 108 0 0 chr17 27569743 27569780 -57868700 + FLAM SINE Alu 82 118 -15 28 0 0 26 chr17 27569783 27569805 -57868675 + AT_rich Low_complexity Low_complexity 1 23 -15 2105 126 3 0 chr17 27569805 27570115 -57868365 + AluSx SINE Alu 1 311 -1 28 0 0 26 chr17 27570115 27570131 -57868349 + AT_rich Low_complexity Low_complexity 23 38 0 190 132 0 79 chr17 27570196 27570234 -57868246 + MIR SINE MIR 21 55 -207 256 159 125 102 chr17 27570760 27570848 -57867632 + MIR3 SINE MIR 104 193 -15 375 23 0 0 chr17 27570889 27570933 -57867547 + (CAT)n Simple_repeat Simple_repeat 3 46 0 353 249 181 35 chr17 27571333 27571541 -57866939 - MLT1K LTR MaLR -349 239 3 355 253 42 0 chr17 27571684 27571779 -57866701 + MIR3 SINE MIR 62 160 -48 1839 206 47 49 chr17 27571781 27572292 -57866188 + L1ME1 LINE L1 5652 6161 -5 225 158 0 0 chr17 27572350 27572388 -57866092 - MLT1K LTR MaLR -29 559 522 1983 149 0 9 chr17 27572389 27572704 -57865776 + AluJo SINE Alu 1 312 0 987 260 80 31 chr17 27572740 27572851 -57865629 - MLT1K LTR MaLR -57 531 427 2159 96 20 3 chr17 27572851 27573152 -57865328 - AluY SINE Alu -5 306 1 987 260 80 31 chr17 27573152 27573445 -57865035 - MLT1K LTR MaLR -161 427 36 241 250 44 0 chr17 27575058 27575126 -57863354 + MIR SINE MIR 79 149 -113 285 287 66 25 chr17 27575370 27575492 -57862988 + MIR SINE MIR 20 146 -62 1268 153 90 60 chr17 27575696 27575825 -57862655 + AluJo SINE Alu 1 125 -187 2175 111 0 0 chr17 27575825 27576131 -57862349 + AluSx SINE Alu 3 308 -4 1268 153 90 60 chr17 27576131 27576302 -57862178 + AluJo SINE Alu 125 310 -2 389 259 23 38 chr17 27576313 27576444 -57862036 - MER5B DNA MER1_type -49 129 1 1055 132 11 29 chr17 27577322 27577496 -57860984 - AluJo/FRAM SINE Alu -9 303 133 1569 166 20 33 chr17 27577497 27577798 -57860682 - AluJo SINE Alu -15 297 1 283 267 0 58 chr17 27579561 27579647 -57858833 + MER5B DNA MER1_type 45 125 -53 430 189 63 0 chr17 27582405 27582500 -57855980 - MER53 DNA DNA 0 189 89 1751 154 25 7 chr17 27582504 27582790 -57855690 - AluJo SINE Alu -21 291 1 426 260 39 8 chr17 27582794 27582921 -57855559 - MER5B DNA MER1_type -22 156 26 852 132 7 21 chr17 27583365 27583509 -57854971 + FLAM_C SINE Alu 1 142 -1 769 189 24 12 chr17 27583537 27583706 -57854774 - MER5B DNA MER1_type 0 178 8 905 111 0 42 chr17 27584440 27584584 -57853896 + AluSq/x SINE Alu 1 138 -175 2195 123 0 0 chr17 27587143 27587453 -57851027 - AluSx SINE Alu -2 310 1 377 150 0 0 chr17 27587498 27587558 -57850922 + MER53 DNA DNA 2 61 -128 510 137 63 40 chr17 27587563 27587701 -57850779 - MLT1C LTR MaLR -262 128 1 206 306 117 68 chr17 27588037 27588302 -57850178 - L2 LINE L2 -18 3254 2977 372 256 109 29 chr17 27588517 27588654 -57849826 + MER5B DNA MER1_type 28 175 -3 181 258 78 39 chr17 27588675 27588803 -57849677 - L2 LINE L2 -226 3046 2914 1274 232 52 7 chr17 27588937 27589247 -57849233 - MLT1B LTR MaLR -8 382 59 564 222 211 0 chr17 27589658 27589829 -57848651 - MIR SINE MIR -12 250 44 453 224 60 128 chr17 27590944 27591067 -57847413 + MLT1G1 LTR MaLR 77 207 -348 1933 104 58 4 chr17 27591067 27591345 -57847135 - AluSq SINE Alu -20 293 1 453 224 60 128 chr17 27591345 27591639 -57846841 + MLT1G1 LTR MaLR 207 555 0 228 163 0 20 chr17 27591702 27591751 -57846729 + Alu SINE Alu 250 297 -5 2179 107 0 3 chr17 27591751 27592060 -57846420 + AluSc SINE Alu 1 308 -1 194 185 56 56 chr17 27592295 27592349 -57846131 - MIR SINE MIR -55 153 100 947 236 105 54 chr17 27592466 27592937 -57845543 - MLT1H LTR MaLR 0 549 15 1284 121 0 5 chr17 27592949 27593139 -57845341 - AluSg/x SINE Alu -22 288 100 1077 262 51 39 chr17 27593258 27593549 -57844931 + L1MC5 LINE L1 7476 7762 -199 2001 112 3 7 chr17 27593549 27593835 -57844645 + AluSx SINE Alu 1 285 -27 222 37 0 0 chr17 27593835 27593862 -57844618 + (CA)n Simple_repeat Simple_repeat 2 28 0 1077 262 51 39 chr17 27593862 27594000 -57844480 + L1MC5 LINE L1 7761 7911 -50 198 242 65 0 chr17 27594556 27594618 -57843862 + MIR SINE MIR 81 146 -62 363 200 39 12 chr17 27594679 27594772 -57843708 - MER20B DNA MER1_type -90 129 32 226 288 16 124 chr17 27594895 27595152 -57843328 - L2 LINE L2 -231 3041 2813 1893 110 0 0 chr17 27595158 27595448 -57843032 - AluSx SINE Alu 0 320 31 1392 171 49 19 chr17 27595687 27595974 -57842506 - AluJo SINE Alu 0 306 12 195 208 10 115 chr17 27596141 27596237 -57842243 - L2 LINE L2 -75 3238 3153 205 318 131 9 chr17 27597662 27597769 -57840711 - MIR SINE MIR -49 213 94 245 319 43 35 chr17 27597971 27598087 -57840393 + L2 LINE L2 3136 3252 -20 425 284 84 45 chr17 27599911 27599950 -57838530 - MIR3 SINE MIR -8 200 164 1897 133 3 56 chr17 27599950 27600273 -57838207 - AluSx SINE Alu -6 306 1 425 284 84 45 chr17 27600273 27600388 -57838092 - MIR3 SINE MIR -44 164 40 1973 130 7 10 chr17 27600623 27600924 -57837556 + AluSx SINE Alu 1 300 -12 239 254 16 16 chr17 27601290 27601353 -57837127 + MIR SINE MIR 76 138 -70 1144 229 99 3 chr17 27601456 27601758 -57836722 + MLT1D LTR MaLR 169 499 -6 2490 61 0 3 chr17 27601989 27602301 -57836179 - AluY SINE Alu 0 311 1 2237 105 0 0 chr17 27602301 27602607 -57835873 - AluSx SINE Alu -6 306 1 2022 113 0 26 chr17 27602607 27602909 -57835571 - AluSc SINE Alu -15 294 1 273 151 0 0 chr17 27603001 27603054 -57835426 + (CA)n Simple_repeat Simple_repeat 1 53 0 1139 134 93 10 chr17 27603375 27603569 -57834911 + MER6B DNA MER2_type 1 210 0 745 316 86 9 chr17 27604136 27604462 -57834018 - L1ME4a LINE L1 -189 5932 5582 300 179 0 0 chr17 27604773 27604829 -57833651 + MIR SINE MIR 105 160 -102 258 333 10 10 chr17 27605468 27605567 -57832913 - MER5A DNA MER1_type -25 164 66 299 261 68 0 chr17 27605689 27605747 -57832733 + MER5B DNA MER1_type 6 73 -105 2748 10 0 3 chr17 27605747 27606057 -57832423 + AluYa5 SINE Alu 1 309 -2 299 261 68 0 chr17 27606057 27606086 -57832394 + MER5B DNA MER1_type 73 99 -79 283 270 146 66 chr17 27606108 27606245 -57832235 + MIR3 SINE MIR 11 158 -50 498 285 20 13 chr17 27606252 27606403 -57832077 + MER117 DNA MER1_type 8 159 -38 1970 116 0 44 chr17 27606719 27607038 -57831442 + AluSq SINE Alu 1 305 -8 249 258 0 0 chr17 27607251 27607344 -57831136 + (TCCA)n Simple_repeat Simple_repeat 4 96 0 769 254 76 97 chr17 27607460 27607484 -57830996 - L2 LINE L2 -65 3248 3225 2140 109 0 0 chr17 27607484 27607758 -57830722 + AluSg SINE Alu 1 274 -36 769 254 76 97 chr17 27607758 27608100 -57830380 - L2 LINE L2 -88 3225 2888 2527 69 3 0 chr17 27608100 27608403 -57830077 + AluY SINE Alu 1 304 -7 769 254 76 97 chr17 27608403 27608417 -57830063 - L2 LINE L2 -425 2888 2875 764 166 0 7 chr17 27608433 27608572 -57829908 - MER41B LTR ERV1 -29 606 469 192 111 0 0 chr17 27608592 27608628 -57829852 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 1457 96 10 0 chr17 27608630 27608827 -57829653 - AluSq SINE Alu -24 289 91 207 229 0 72 chr17 27609117 27609200 -57829280 + G-rich Low_complexity Low_complexity 4 80 0 25 65 0 0 chr17 27609529 27609575 -57828905 + GC_rich Low_complexity Low_complexity 1 46 0 470 306 114 29 chr17 27609905 27610186 -57828294 - L3 LINE CR1 -356 1221 917 2695 32 0 10 chr17 27610516 27610826 -57827654 - AluY SINE Alu -4 307 1 972 143 0 0 chr17 27610925 27611058 -57827422 + AluJo/FLAM SINE Alu 1 133 -179 1928 139 10 7 chr17 27611060 27611348 -57827132 + AluSx SINE Alu 2 290 -22 263 376 16 0 chr17 27611641 27611766 -57826714 + MIR3 SINE MIR 76 202 -6 2517 81 7 0 chr17 27612180 27612487 -57825993 - AluSq SINE Alu -4 309 1 543 237 13 33 chr17 27612862 27613014 -57825466 - L1MC5 LINE L1 -523 7438 7290 286 295 84 0 chr17 27613184 27613279 -57825201 - L2 LINE L2 -184 3088 2986 273 217 60 12 chr17 27613528 27613611 -57824869 - MIR3 SINE MIR -40 168 82 268 195 407 0 chr17 27613987 27614100 -57824380 - LTR16A LTR ERVL -259 191 33 233 271 36 22 chr17 27614638 27614748 -57823732 - MIR SINE MIR -13 195 81 1745 112 93 0 chr17 27615047 27615332 -57823148 + AluSx SINE Alu 1 309 0 314 265 161 49 chr17 27615381 27615604 -57822876 - MER112 DNA MER1_type -12 248 1 1972 145 0 43 chr17 27615650 27615975 -57822505 - AluJb SINE Alu -1 311 1 365 226 0 52 chr17 27615975 27616090 -57822390 + MER113 DNA MER1_type? 4 112 -409 1615 116 104 37 chr17 27617099 27617367 -57821113 - AluJo SINE Alu -26 286 1 28 91 0 0 chr17 27617991 27618068 -57820412 + GC_rich Low_complexity Low_complexity 1 77 0 22 0 0 0 chr17 27618348 27618370 -57820110 + GC_rich Low_complexity Low_complexity 1 22 0 438 286 171 6 chr17 27622002 27622177 -57816303 + MIR SINE MIR 27 230 -32 24 53 0 0 chr17 27622218 27622256 -57816224 + AT_rich Low_complexity Low_complexity 1 38 0 2298 128 0 0 chr17 27622256 27622568 -57815912 - AluSx SINE Alu 0 312 1 291 140 0 0 chr17 27622570 27622620 -57815860 + (T)n Simple_repeat Simple_repeat 1 50 0 1864 148 50 3 chr17 27622620 27622918 -57815562 - AluSx SINE Alu 0 312 1 28 0 0 0 chr17 27622918 27622946 -57815534 + AT_rich Low_complexity Low_complexity 1 28 0 271 287 85 11 chr17 27623114 27623208 -57815272 + MIR SINE MIR 9 109 -153 209 169 62 77 chr17 27623308 27623373 -57815107 - L2 LINE L2 -35 3237 3174 276 301 139 54 chr17 27624780 27624946 -57813534 + MIR SINE MIR 56 235 -27 1016 157 0 30 chr17 27625342 27625354 -57813126 + AluJo SINE Alu 122 133 -179 1671 184 10 16 chr17 27625354 27625658 -57812822 + AluJo SINE Alu 1 302 -10 1016 157 0 30 chr17 27625658 27625811 -57812669 + AluJo SINE Alu 133 282 -30 1993 136 83 6 chr17 27626646 27627237 -57811243 - MER39 LTR ERV1 0 707 4 812 143 0 8 chr17 27628312 27628431 -57810049 - FLAM_C SINE Alu -25 118 1 875 237 127 3 chr17 27629149 27629440 -57809040 + MER46C DNA MER2_type 1 327 -11 2088 135 6 13 chr17 27629742 27630054 -57808426 + AluSx SINE Alu 1 310 -2 386 242 105 33 chr17 27631338 27631491 -57806989 - MER46C DNA MER2_type -174 164 1 276 295 208 7 chr17 27631953 27632102 -57806378 - MER5A DNA MER1_type 0 189 11 223 222 143 16 chr17 27632188 27632251 -57806229 - L2 LINE L2 -209 3063 2993 613 257 109 0 chr17 27632254 27632437 -57806043 - MIR SINE MIR 0 262 60 340 268 66 69 chr17 27632898 27633046 -57805434 - MIR SINE MIR -64 144 41 1555 144 0 0 chr17 27635128 27635350 -57803130 + AluSg/x SINE Alu 84 305 -5 2045 158 42 6 chr17 27635561 27635896 -57802584 + MER7A DNA MER2_type 1 345 -1 2270 101 3 22 chr17 27635956 27636272 -57802208 - AluSg SINE Alu 0 310 1 2056 138 3 7 chr17 27636295 27636600 -57801880 - AluSx SINE Alu -8 304 1 2048 155 0 3 chr17 27637301 27637604 -57800876 - AluJb SINE Alu -10 302 1 2357 89 0 26 chr17 27637653 27637966 -57800514 - AluY SINE Alu -6 305 1 477 164 0 0 chr17 27638077 27638150 -57800330 + AluS SINE Alu 2 74 -238 2163 154 30 3 chr17 27638250 27638619 -57799861 - MER41B LTR ERV1 -256 379 1 732 230 47 24 chr17 27638663 27638876 -57799604 - L2 LINE L2 -866 2448 2231 227 319 116 14 chr17 27638892 27639099 -57799381 + MLT1K LTR MaLR 15 242 -346 396 0 0 0 chr17 27639400 27639444 -57799036 + (CA)n Simple_repeat Simple_repeat 2 45 0 501 277 49 3 chr17 27639619 27639783 -57798697 + MIR SINE MIR 19 186 -50 347 316 11 0 chr17 27640351 27640446 -57798034 + MIR SINE MIR 45 140 -122 487 274 31 40 chr17 27640475 27640585 -57797895 + L1MC4a LINE L1 5517 5626 -2182 3927 102 28 2 chr17 27640585 27641125 -57797355 - MER41A LTR ERV1 0 554 1 487 274 31 40 chr17 27641125 27641228 -57797252 + L1MC4a LINE L1 5626 5730 -2078 2292 113 3 0 chr17 27641228 27641538 -57796942 + AluSx SINE Alu 1 311 -1 949 222 14 0 chr17 27641564 27641780 -57796700 + L1MC4a LINE L1 5719 5937 -1871 237 33 0 0 chr17 27641783 27641813 -57796667 + (CA)n Simple_repeat Simple_repeat 2 31 0 265 192 0 26 chr17 27642456 27642534 -57795946 + CT-rich Low_complexity Low_complexity 1 76 0 854 248 19 105 chr17 27642543 27642807 -57795673 + MLT1J LTR MaLR 180 414 -97 2038 156 3 0 chr17 27642807 27643114 -57795366 + AluSx SINE Alu 1 308 -4 854 248 19 105 chr17 27643114 27643164 -57795316 + MLT1J LTR MaLR 414 467 -44 446 287 77 0 chr17 27643312 27643455 -57795025 - MLT1I LTR MaLR -231 178 25 265 304 0 14 chr17 27643488 27643557 -57794923 - MIR SINE MIR -81 127 60 2440 79 0 0 chr17 27643577 27643867 -57794613 + AluSq SINE Alu 11 300 -13 591 331 41 48 chr17 27644598 27645130 -57793350 + L1MC/D LINE L1 2425 3008 -3532 2507 94 3 0 chr17 27645177 27645486 -57792994 - AluSp SINE Alu -3 310 1 609 303 81 17 chr17 27645556 27645777 -57792703 + L1MC/D LINE L1 4918 5124 -1416 2653 36 7 0 chr17 27645777 27646086 -57792394 + AluY SINE Alu 1 311 0 609 303 81 17 chr17 27646086 27646099 -57792381 + L1MC/D LINE L1 5124 5135 -1405 1950 137 0 7 chr17 27646099 27646384 -57792096 + AluSx SINE Alu 1 283 -29 609 303 81 17 chr17 27646384 27646667 -57791813 + L1MC/D LINE L1 5135 5469 -1071 1620 192 0 19 chr17 27646853 27647166 -57791314 + AluSg SINE Alu 3 309 -1 1286 126 0 25 chr17 27647300 27647498 -57790982 + AluY SINE Alu 119 311 0 298 289 120 34 chr17 27647498 27647645 -57790835 + L1MC/D LINE L1 5691 5824 -2378 270 0 0 0 chr17 27647645 27647675 -57790805 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 298 289 120 34 chr17 27647675 27647818 -57790662 + L1MC/D LINE L1 5824 6006 -2196 5637 217 61 51 chr17 27648031 27648999 -57789481 - L1M4c LINE L1 -3093 3551 2594 721 161 7 35 chr17 27648999 27649142 -57789338 - L1MA3 LINE L1 0 6305 6167 5637 217 61 51 chr17 27649142 27649165 -57789315 - L1M4c LINE L1 -4050 2594 2573 2357 88 0 14 chr17 27649165 27649460 -57789020 - AluSc SINE Alu -18 291 1 5637 217 61 51 chr17 27649460 27650338 -57788142 - L1M4c LINE L1 -4071 2573 1705 1984 160 0 0 chr17 27650338 27650638 -57787842 - AluSx SINE Alu -12 300 1 5637 217 61 51 chr17 27650638 27650954 -57787526 - L1M4c LINE L1 -4939 1705 1394 1191 182 186 24 chr17 27650954 27651207 -57787273 + AluSg SINE Alu 1 294 -6 5637 217 61 51 chr17 27651207 27651928 -57786552 - L1M4c LINE L1 -5250 1394 486 2185 91 0 18 chr17 27651928 27652234 -57786246 + AluSx SINE Alu 4 304 0 5637 217 61 51 chr17 27652234 27652530 -57785950 - L1M4c LINE L1 -6158 486 194 759 324 47 52 chr17 27652534 27652920 -57785560 - L1M4 LINE L1 -1195 4951 4568 2282 269 40 48 chr17 27652970 27653076 -57785404 + L1ME3A LINE L1 2901 3006 -3140 2106 126 0 7 chr17 27653076 27653403 -57785077 - AluSx SINE Alu 0 312 1 2282 269 40 48 chr17 27653403 27653432 -57785048 + L1ME3A LINE L1 3006 3034 -3112 2446 169 14 2 chr17 27653432 27653845 -57784635 - MER47B DNA MER2_type 0 418 1 2282 269 40 48 chr17 27653845 27654039 -57784441 + L1ME3A LINE L1 3034 3228 -2918 1715 180 0 7 chr17 27654039 27654349 -57784131 + AluJo SINE Alu 1 308 0 2282 269 40 48 chr17 27654349 27654546 -57783934 + L1ME3A LINE L1 3228 3425 -2721 2077 121 7 0 chr17 27654546 27654826 -57783654 + AluSp SINE Alu 11 292 -21 2282 269 40 48 chr17 27654826 27655353 -57783127 + L1ME3A LINE L1 3425 3949 -2197 712 152 0 0 chr17 27655359 27655471 -57783009 - FLAM_C SINE Alu -2 141 30 2162 234 78 78 chr17 27655487 27655800 -57782680 + L1ME3A LINE L1 3934 4246 -1916 2008 142 4 0 chr17 27655800 27656113 -57782367 - AluSq SINE Alu 0 314 1 2162 234 78 78 chr17 27656113 27656657 -57781823 + L1ME3A LINE L1 4246 4789 -1373 249 33 0 0 chr17 27656657 27656687 -57781793 + (TG)n Simple_repeat Simple_repeat 1 30 0 2162 234 78 78 chr17 27656687 27657441 -57781039 + L1ME3A LINE L1 4789 5559 -603 1871 153 20 10 chr17 27657441 27657736 -57780744 - AluSx SINE Alu -14 298 1 2162 234 78 78 chr17 27657736 27658233 -57780247 + L1ME3A LINE L1 5559 6055 -107 2127 117 0 7 chr17 27658614 27658922 -57779558 - AluSx SINE Alu -6 306 1 214 243 100 0 chr17 27659155 27659225 -57779255 + L3 LINE CR1 80 156 -1421 856 196 25 0 chr17 27659464 27659622 -57778858 - AluJb SINE Alu -14 298 137 1028 271 133 8 chr17 27659738 27660099 -57778381 - MLT1I LTR MaLR -3 406 1 1883 105 0 59 chr17 27660469 27660773 -57777707 + AluSx SINE Alu 1 286 -26 22 0 0 0 chr17 27660805 27660827 -57777653 + AT_rich Low_complexity Low_complexity 1 22 0 762 139 46 26 chr17 27660827 27660978 -57777502 - HERVH LTR ERV1 -7559 154 1 821 105 39 65 chr17 27660978 27661131 -57777349 - LTR7 LTR ERV1 0 450 302 1785 139 25 0 chr17 27661253 27661533 -57776947 - AluSx SINE Alu -25 287 1 1267 154 80 136 chr17 27661533 27661909 -57776571 - MER57A LTR ERV1 -6 397 43 182 171 29 0 chr17 27661932 27661967 -57776513 + L3 LINE CR1 431 466 -1111 1171 172 250 40 chr17 27661970 27662342 -57776138 + LTR7 LTR ERV1 1 450 0 255 355 43 7 chr17 27662345 27662483 -57775997 + L3 LINE CR1 468 610 -967 742 179 0 0 chr17 27662880 27662992 -57775488 + AluSq/x SINE Alu 1 112 -201 3366 122 18 6 chr17 27662992 27663494 -57774986 + MER9 LTR ERVK 4 511 0 4507 101 30 21 chr17 27663494 27664150 -57774330 + HERVK9 LTR ERVK 1 662 -5254 23422 86 14 1 chr17 27664150 27668030 -57770450 + HERVK9 LTR ERVK 1625 5634 -282 2183 136 11 13 chr17 27668056 27668410 -57770070 + HERVK9 LTR ERVK 5635 5916 0 3392 106 41 4 chr17 27668410 27668903 -57769577 + MER9 LTR ERVK 1 511 0 920 193 0 6 chr17 27668935 27669101 -57769379 + FRAM SINE Alu 1 165 -1 283 207 18 63 chr17 27669323 27669434 -57769046 + L2 LINE L2 3079 3184 -129 480 217 0 0 chr17 27669451 27669543 -57768937 + MER34 LTR ERV1 5 96 -446 2043 115 0 0 chr17 27669620 27669922 -57768558 - AluSx SINE Alu 0 305 4 2121 120 0 0 chr17 27669933 27670232 -57768248 - AluSx SINE Alu -13 299 1 1765 117 0 55 chr17 27670256 27670546 -57767934 - AluSx SINE Alu -15 297 24 1478 167 33 20 chr17 27670715 27671015 -57767465 - AluJo SINE Alu 0 312 9 2075 95 3 0 chr17 27671053 27671336 -57767144 - AluSq SINE Alu -29 284 1 1388 200 20 76 chr17 27671338 27671822 -57766658 + LTR9 LTR ERV1 61 475 -137 605 175 74 58 chr17 27671819 27672008 -57766472 + LTR19C LTR ERV1 588 779 0 * 1992 122 3 3 chr17 27672023 27672317 -57766163 - AluSq SINE Alu -19 294 1 3698 107 10 0 chr17 27672360 27672872 -57765608 + MER41B LTR ERV1 1 517 -118 1724 135 4 18 chr17 27672872 27673021 -57765459 - AluSp SINE Alu -2 311 166 3905 84 328 0 chr17 27673021 27673643 -57764837 + LTR12 LTR ERV1 1 826 0 1724 135 4 18 chr17 27673643 27673774 -57764706 - AluSp SINE Alu -147 166 35 933 81 0 0 chr17 27673774 27673898 -57764582 + MER41A LTR ERV1 431 554 0 342 0 0 0 chr17 27674057 27674095 -57764385 + (TTA)n Simple_repeat Simple_repeat 1 38 0 1279 184 133 30 chr17 27674357 27674628 -57763852 + AluSc SINE Alu 1 299 0 899 214 78 6 chr17 27674863 27675081 -57763399 + MLT2B1 LTR ERVL 3 217 -236 312 70 0 0 chr17 27675097 27675140 -57763340 + (TC)n Simple_repeat Simple_repeat 2 44 0 1816 227 127 20 chr17 27675789 27676326 -57762154 + L1MC4 LINE L1 6488 7081 -961 859 260 138 16 chr17 27676331 27676490 -57761990 + L1MC4 LINE L1 7413 7551 -491 2024 172 121 5 chr17 27676490 27676903 -57761577 - LOR1b LTR ERV1 0 461 1 859 260 138 16 chr17 27676903 27677055 -57761425 + L1MC4 LINE L1 7551 7762 -280 799 206 146 10 chr17 27677056 27677255 -57761225 - MLT1G LTR MaLR -3 587 362 * 1339 147 9 0 chr17 27677246 27677457 -57761023 + LOR1b LTR ERV1 211 423 -38 * 1349 198 122 23 chr17 27677455 27677828 -57760652 - MLT1G LTR MaLR -209 386 1 271 246 94 43 chr17 27677830 27677894 -57760586 + L1MC4 LINE L1 7758 7817 -225 2161 82 20 3 chr17 27677894 27678188 -57760292 - AluSq SINE Alu -10 303 5 271 246 94 43 chr17 27678188 27678261 -57760219 + L1MC4 LINE L1 7817 7902 -140 444 349 121 4 chr17 27678305 27678537 -57759943 + L1ME LINE L1 5260 5518 -646 365 308 70 32 chr17 27678574 27678740 -57759740 - L1ME4a LINE L1 -263 5858 5700 1795 170 0 3 chr17 27678740 27679040 -57759440 + AluJo SINE Alu 1 299 -13 207 0 0 0 chr17 27679040 27679063 -57759417 + (TA)n Simple_repeat Simple_repeat 1 23 0 365 308 70 32 chr17 27679063 27679080 -57759400 - L1ME4a LINE L1 -420 5701 5667 2109 107 0 32 chr17 27679655 27679965 -57758515 + AluSx SINE Alu 1 300 -12 277 241 0 0 chr17 27680157 27680240 -57758240 + L1ME3A LINE L1 5225 5307 -839 1033 150 0 0 chr17 27680255 27680415 -57758065 + AluSg/x SINE Alu 135 294 -18 609 252 73 34 chr17 27680443 27680736 -57757744 + L1ME3A LINE L1 5324 5625 -537 649 241 14 7 chr17 27680738 27680879 -57757601 + MLT1H1 LTR MaLR 1 142 -413 344 228 62 62 chr17 27681074 27681219 -57757261 + MLT1H1 LTR MaLR 180 324 -271 308 167 5 5 chr17 27681305 27681375 -57757105 + MLT1G LTR MaLR 526 590 0 574 282 50 19 chr17 27681375 27681682 -57756798 + L1ME3A LINE L1 5621 5948 -214 408 200 0 0 chr17 27681952 27682037 -57756443 + GA-rich Low_complexity Low_complexity 3 87 0 2090 86 0 36 chr17 27682043 27682345 -57756135 + AluSg1 SINE Alu 1 291 -18 1161 121 0 0 chr17 27682345 27682519 -57755961 + AluSc SINE Alu 132 305 -4 180 184 26 0 chr17 27682547 27682585 -57755895 - MIR SINE MIR -165 97 59 841 191 165 5 chr17 27682726 27682850 -57755630 + MLT1A1 LTR MaLR 3 106 -259 2217 156 47 40 chr17 27682850 27683273 -57755207 - MSTB LTR MaLR 0 426 1 841 191 165 5 chr17 27683273 27683336 -57755144 + MLT1A1 LTR MaLR 106 220 -145 483 127 14 0 chr17 27683334 27683405 -57755075 + MLT1A1 LTR MaLR 252 323 -42 * 194 172 109 78 chr17 27684074 27684138 -57754342 + MIR3 SINE MIR 105 170 -38 272 338 65 7 chr17 27684216 27684370 -57754110 - MER20B DNA MER1_type -614 169 7 2394 46 0 7 chr17 27684462 27684765 -57753715 - AluY SINE Alu -10 301 1 1647 112 8 8 chr17 27685423 27685672 -57752808 + AluSx SINE Alu 64 312 0 203 329 95 58 chr17 27685677 27685814 -57752666 + MIR SINE MIR 57 198 -64 2193 94 0 46 chr17 27686083 27686411 -57752069 - AluSq SINE Alu 0 313 1 2974 204 34 27 chr17 27686827 27687297 -57751183 - MER82 DNA MER2_type -1 652 176 1899 147 0 10 chr17 27687297 27687611 -57750869 + AluSx SINE Alu 1 311 -1 2974 204 34 27 chr17 27687611 27687761 -57750719 - MER82 DNA MER2_type -477 176 28 565 283 178 48 chr17 27687754 27688210 -57750270 + LTR67 LTR ERVL 31 545 -12 * 914 184 79 16 chr17 27688841 27689031 -57749449 - MLT1A2 LTR MaLR 0 374 173 296 62 0 42 chr17 27689034 27689082 -57749398 + (GGGAGA)n Simple_repeat Simple_repeat 3 48 0 645 144 0 66 chr17 27689182 27689363 -57749117 + (GGGAGA)n Simple_repeat Simple_repeat 1 169 0 761 170 88 6 chr17 27689382 27689541 -57748939 - MLT1A2 LTR MaLR -218 172 1 221 307 270 0 chr17 27689573 27689710 -57748770 + MIR3 SINE MIR 24 197 -11 678 179 179 6 chr17 27690249 27690405 -57748075 + MER5A DNA MER1_type 7 189 0 387 284 116 13 chr17 27690402 27690557 -57747923 + MIR3 SINE MIR 1 171 -37 * 467 168 32 32 chr17 27690936 27691031 -57747449 - MER5A DNA MER1_type -1 188 94 664 163 76 70 chr17 27691041 27691213 -57747267 + MLT1B LTR MaLR 1 173 -217 959 178 14 33 chr17 27691215 27691429 -57747051 - AluSx SINE Alu -102 210 1 206 245 57 0 chr17 27692259 27692312 -57746168 - MIR3 SINE MIR -25 183 128 320 203 0 0 chr17 27692566 27692635 -57745845 - AluJ/monomer SINE Alu 0 302 234 241 288 245 10 chr17 27692638 27693030 -57745450 + L2 LINE L2 2447 2930 -384 216 169 261 0 chr17 27693411 27693476 -57745004 - MIR SINE MIR -87 175 94 447 264 71 21 chr17 27693476 27693616 -57744864 + L1ME LINE L1 136 282 -5923 * 1938 278 49 37 chr17 27693589 27694177 -57744303 + L1ME LINE L1 1054 1658 -4738 2261 100 0 3 chr17 27694177 27694487 -57743993 + AluY SINE Alu 1 309 -2 1938 278 49 37 chr17 27694487 27694788 -57743692 + L1ME LINE L1 1658 1954 -4442 41506 65 7 4 chr17 27694869 27700996 -57737484 - L1PA5 LINE L1 -1 6153 5 1813 151 7 3 chr17 27701529 27701834 -57736646 + AluJb SINE Alu 1 306 -6 516 231 101 111 chr17 27702022 27702585 -57735895 + LTR33A LTR ERVL 1 523 0 510 258 26 16 chr17 27702635 27702786 -57735694 + MIR SINE MIR 5 154 -55 239 272 52 12 chr17 27703240 27703344 -57735136 - MIR SINE MIR -60 148 86 953 123 0 0 chr17 27703405 27703567 -57734913 + AluSc SINE Alu 144 305 0 1400 181 3 58 chr17 27703579 27703714 -57734766 + AluJo SINE Alu 1 142 -170 1656 154 7 4 chr17 27703714 27703987 -57734493 - AluSx SINE Alu -23 289 16 1400 181 3 58 chr17 27703987 27704161 -57734319 + AluJo SINE Alu 142 293 -19 186 206 0 0 chr17 27704250 27704284 -57734196 - L2 LINE L2 -18 3254 3221 275 324 57 0 chr17 27704319 27704424 -57734056 - MIR SINE MIR -114 148 38 411 318 52 57 chr17 27704730 27704922 -57733558 + L2 LINE L2 2871 3061 -211 307 316 65 32 chr17 27705038 27705193 -57733287 - MER5B DNA MER1_type -18 160 1 599 247 0 16 chr17 27705262 27705279 -57733201 + GA-rich Low_complexity Low_complexity 1 17 -1384 5587 92 24 70 chr17 27705279 27706145 -57732335 - LTR12 LTR ERV1 0 826 1 599 247 0 16 chr17 27706145 27706303 -57732177 + GA-rich Low_complexity Low_complexity 17 176 -1225 2081 102 9 19 chr17 27706303 27706618 -57731862 + AluSx SINE Alu 1 312 0 599 247 0 16 chr17 27706618 27706687 -57731793 + GA-rich Low_complexity Low_complexity 176 1401 0 461 268 78 13 chr17 27706819 27706972 -57731508 + MIR SINE MIR 32 194 -68 284 282 225 0 chr17 27706987 27707129 -57731351 - MER5A DNA MER1_type -7 182 9 1878 180 148 9 chr17 27707350 27707788 -57730692 - MLT1D LTR MaLR -6 499 1 259 331 162 0 chr17 27708952 27709088 -57729392 + MIR SINE MIR 3 160 -102 231 114 0 0 chr17 27709286 27709321 -57729159 + (TC)n Simple_repeat Simple_repeat 2 36 0 1977 163 0 10 chr17 27709340 27709646 -57728834 - AluJb SINE Alu -9 303 1 361 264 42 28 chr17 27709761 27709905 -57728575 - MIR SINE MIR -34 228 83 273 29 0 0 chr17 27710461 27710495 -57727985 + (CA)n Simple_repeat Simple_repeat 2 35 0 424 163 23 35 chr17 27710645 27710731 -57727749 + FLAM_A SINE Alu 1 85 -57 21 0 0 0 chr17 27710809 27710830 -57727650 + AT_rich Low_complexity Low_complexity 1 21 0 542 248 86 74 chr17 27710837 27711194 -57727286 + L1ME3A LINE L1 2143 2460 -3755 2420 89 0 13 chr17 27711194 27711509 -57726971 + AluY SINE Alu 1 311 0 542 248 86 74 chr17 27711509 27711577 -57726903 + L1ME3A LINE L1 2460 2526 -3689 615 275 41 32 chr17 27711582 27711920 -57726560 + L1ME3A LINE L1 4246 4586 -1629 * 1577 174 50 30 chr17 27711916 27712033 -57726447 + L1M4 LINE L1 4963 5076 -1070 2009 71 114 4 chr17 27712033 27712314 -57726166 - AluSx SINE Alu 0 312 1 1577 174 50 30 chr17 27712314 27712592 -57725888 + L1M4 LINE L1 5076 5366 -780 696 104 0 38 chr17 27712604 27712710 -57725770 + AluSc SINE Alu 35 136 -173 668 197 0 0 chr17 27712834 27712966 -57725514 + L1MA10 LINE L1 6196 6327 -7 1510 257 124 33 chr17 27712967 27713503 -57724977 + L1ME3A LINE L1 4553 5039 -1200 1704 196 33 0 chr17 27713503 27713804 -57724676 - AluJo SINE Alu 0 312 2 1510 257 124 33 chr17 27713804 27714009 -57724471 + L1ME3A LINE L1 5039 5224 -1015 1762 177 3 3 chr17 27714009 27714292 -57724188 + AluJb SINE Alu 10 292 -20 1510 257 124 33 chr17 27714292 27714902 -57723578 + L1ME3A LINE L1 5224 6037 -202 334 214 60 68 chr17 27714931 27715048 -57723432 + L1ME3A LINE L1 6003 6118 -121 350 296 54 75 chr17 27715136 27715322 -57723158 - MLT1L LTR MaLR -418 197 16 374 322 53 20 chr17 27715725 27715877 -57722603 - MIR SINE MIR -85 177 21 197 329 53 20 chr17 27716269 27716421 -57722059 - L3 LINE CR1 -109 1468 1312 2840 197 97 31 chr17 27716596 27717161 -57721319 + Zaphod DNA AcHobo 43 672 -3359 1559 120 50 173 chr17 27717161 27717315 -57721165 - MER1B DNA MER1_type -2373 337 256 2314 101 3 0 chr17 27717315 27717613 -57720867 + AluSq SINE Alu 1 299 -14 1559 120 50 173 chr17 27717613 27717840 -57720640 - MER1B DNA MER1_type -2454 256 3 2840 197 97 31 chr17 27717840 27718038 -57720442 + Zaphod DNA AcHobo 672 856 -3175 859 243 67 0 chr17 27718038 27718248 -57720232 - MER58A DNA MER1_type 0 224 1 2231 103 3 35 chr17 27718325 27718637 -57719843 - AluSx SINE Alu -10 302 1 1274 192 20 28 chr17 27718753 27719008 -57719472 + AluJo SINE Alu 36 288 -24 701 160 71 30 chr17 27719031 27719116 -57719364 + Zaphod DNA AcHobo 3596 3676 -355 1801 189 0 0 chr17 27719116 27719423 -57719057 + AluJb SINE Alu 1 307 -5 701 160 71 30 chr17 27719423 27719506 -57718974 + Zaphod DNA AcHobo 3676 3771 -260 2078 106 11 3 chr17 27719507 27719812 -57718668 - AluSx SINE Alu 0 307 1 1997 172 26 3 chr17 27719843 27719972 -57718508 - Tigger3(Golem) DNA MER2_type -879 2149 2024 1226 150 132 79 chr17 27719972 27720252 -57718228 - AluJb SINE Alu -17 295 1 1997 172 26 3 chr17 27720252 27720465 -57718015 - Tigger3(Golem) DNA MER2_type -1004 2024 2 205 172 17 52 chr17 27720465 27720523 -57717957 + MIR SINE MIR 152 207 -55 2344 97 3 0 chr17 27720656 27720954 -57717526 - AluSp SINE Alu -14 299 1 21 36 0 0 chr17 27720977 27721005 -57717475 + AT_rich Low_complexity Low_complexity 1 28 0 204 273 156 0 chr17 27721217 27721294 -57717186 - L3 LINE CR1 -478 1099 1011 496 230 145 7 chr17 27722743 27722895 -57715585 + MIR SINE MIR 42 214 -48 426 270 86 6 chr17 27723253 27723416 -57715064 + MIR SINE MIR 35 210 -52 424 217 0 61 chr17 27723617 27723732 -57714748 - MIR SINE MIR -84 124 17 351 327 58 9 chr17 27724122 27724345 -57714135 - L2 LINE L2 -1217 2097 1864 423 295 83 5 chr17 27724416 27724609 -57713871 - MIR SINE MIR -3 259 52 1889 176 0 0 chr17 27724923 27725235 -57713245 + AluJb SINE Alu 1 312 0 291 54 0 0 chr17 27725250 27725287 -57713193 + (CA)n Simple_repeat Simple_repeat 2 38 0 301 293 168 6 chr17 27725536 27725703 -57712777 - L2 LINE L2 0 3272 3079 227 302 35 0 chr17 27725998 27726084 -57712396 + MIR SINE MIR 58 146 -62 635 280 89 0 chr17 27726820 27727045 -57711435 - MIR SINE MIR -12 250 6 476 290 31 52 chr17 27727086 27727376 -57711104 - L3 LINE CR1 -24 1553 1270 21 0 0 0 chr17 27727594 27727615 -57710865 + AT_rich Low_complexity Low_complexity 1 21 0 4423 159 18 16 chr17 27727798 27728135 -57710345 + L1MCa LINE L1 163 498 -5928 2127 99 0 7 chr17 27728135 27728440 -57710040 + AluSg SINE Alu 1 303 0 4423 159 18 16 chr17 27728440 27728893 -57709587 + L1MCa LINE L1 498 955 -5471 1807 164 3 16 chr17 27728893 27729197 -57709283 + AluJb SINE Alu 1 300 -12 241 150 0 0 chr17 27729197 27729237 -57709243 - L1MCa LINE L1 -5345 1081 1042 1010 121 13 0 chr17 27729247 27729404 -57709076 + L1MCa LINE L1 1769 1927 -4499 466 250 125 6 chr17 27729405 27729573 -57708907 - MIR3 SINE MIR -12 196 9 222 239 45 0 chr17 27730181 27730248 -57708232 - L2 LINE L2 -4 3309 3240 2217 125 0 3 chr17 27730301 27730598 -57707882 + AluSx SINE Alu 1 296 -16 679 264 6 0 chr17 27730706 27730880 -57707600 + L1MEd LINE L1 31 205 -5914 896 286 63 76 chr17 27730940 27731545 -57706935 + L1MEd LINE L1 424 1020 -5099 225 204 0 0 chr17 27731545 27731589 -57706891 + Charlie1 DNA MER1_type 793 836 -1925 21 71 0 0 chr17 27731589 27731631 -57706849 + AT_rich Low_complexity Low_complexity 1 42 0 1330 140 21 91 chr17 27731631 27731791 -57706689 - L1MA7 LINE L1 -3 6288 6118 2018 129 7 13 chr17 27731791 27732094 -57706386 - AluJb SINE Alu -11 301 1 1330 140 21 91 chr17 27732094 27732358 -57706122 - L1MA7 LINE L1 -173 6118 5926 1080 164 27 41 chr17 27732360 27732536 -57705944 - Tigger1 DNA MER2_type 0 2418 2243 2273 88 0 3 chr17 27732536 27732843 -57705637 - AluSq SINE Alu 0 306 1 1080 164 27 41 chr17 27732843 27732885 -57705595 - Tigger1 DNA MER2_type -175 2243 2202 659 215 0 40 chr17 27732868 27733017 -57705463 - Tigger1 DNA MER2_type -2255 163 21 * 6644 148 13 15 chr17 27733022 27734474 -57704006 - L1MA7 LINE L1 -366 5925 4481 1769 140 44 4 chr17 27734474 27734800 -57703680 - AluSq SINE Alu 0 337 1 6644 148 13 15 chr17 27734800 27735129 -57703351 - L1MA7 LINE L1 -1810 4481 4153 592 193 57 7 chr17 27735129 27735269 -57703211 + Charlie1 DNA MER1_type 803 949 -1812 922 268 24 20 chr17 27735305 27735559 -57702921 - MER69 DNA AcHobo -673 553 299 230 304 36 89 chr17 27735629 27735741 -57702739 + MLT2E LTR ERVL 69 174 -454 266 229 0 0 chr17 27735925 27735986 -57702494 + ERVL LTR ERVL 3877 3937 -1827 1910 150 17 0 chr17 27735987 27736281 -57702199 + AluSx SINE Alu 3 301 -11 792 264 62 94 chr17 27736395 27736493 -57701987 + L1ME3 LINE L1 4745 4845 -1317 1951 178 37 6 chr17 27736493 27736847 -57701633 + MLT1A1 LTR MaLR 1 365 0 792 264 62 94 chr17 27736847 27737162 -57701318 + L1ME3 LINE L1 4845 5169 -993 819 205 12 30 chr17 27737162 27737328 -57701152 + FRAM SINE Alu 4 166 0 792 264 62 94 chr17 27737328 27738123 -57700357 + L1ME3 LINE L1 5169 5952 -210 1400 142 21 97 chr17 27738317 27738632 -57699848 - AluJb SINE Alu 0 308 16 295 139 125 14 chr17 27738906 27738978 -57699502 + L1MEd LINE L1 1167 1246 -4873 2539 53 0 16 chr17 27739007 27739311 -57699169 + AluY SINE Alu 1 299 -12 496 246 31 8 chr17 27739324 27739454 -57699026 + MER94 DNA DNA 1 133 -1 231 305 123 13 chr17 27740075 27740229 -57698251 - L1MC/D LINE L1 -2084 5724 5554 258 194 0 0 chr17 27740263 27740325 -57698155 + A-rich Low_complexity Low_complexity 1 62 0 1272 70 0 0 chr17 27740455 27740613 -57697867 + AluY SINE Alu 153 310 -1 241 243 158 40 chr17 27740621 27740823 -57697657 + L1ME3A LINE L1 1843 2068 -4472 23 0 0 0 chr17 27740890 27740913 -57697567 + AT_rich Low_complexity Low_complexity 1 23 0 2292 110 3 0 chr17 27741217 27741517 -57696963 + AluSq SINE Alu 1 301 -12 2150 246 79 69 chr17 27741599 27741864 -57696616 + L1ME3A LINE L1 2524 2785 -3755 2068 102 49 30 chr17 27741864 27742169 -57696311 + AluSx SINE Alu 1 311 -1 2150 246 79 69 chr17 27742169 27743178 -57695302 + L1ME3A LINE L1 2785 3820 -2720 1449 129 183 38 chr17 27743178 27743441 -57695039 + AluJb SINE Alu 1 301 -11 2150 246 79 69 chr17 27743441 27743766 -57694714 + L1ME3A LINE L1 3820 4140 -2400 586 165 0 0 chr17 27743789 27743880 -57694600 + U6 snRNA snRNA 17 107 0 4392 83 40 2 chr17 27743880 27744485 -57693995 + L1MA2 LINE L1 5445 6072 -232 1141 110 13 0 chr17 27744514 27744669 -57693811 + AluSq SINE Alu 108 264 -49 1747 48 35 4 chr17 27744669 27744896 -57693584 + L1MA1 LINE L1 6069 6302 0 322 305 35 28 chr17 27744922 27745063 -57693417 + L1ME3A LINE L1 4146 4287 -2253 1537 201 121 51 chr17 27745121 27745289 -57693191 + MSTB2 LTR MaLR 15 170 -287 1735 164 30 33 chr17 27745289 27745593 -57692887 - AluJo SINE Alu -9 303 1 1537 201 121 51 chr17 27745593 27745837 -57692643 + MSTB2 LTR MaLR 170 456 -1 25 0 0 0 chr17 27745837 27745862 -57692618 + AT_rich Low_complexity Low_complexity 1 25 0 685 297 27 20 chr17 27745862 27746155 -57692325 + L1ME3A LINE L1 4348 4642 -1898 892 174 7 13 chr17 27746160 27746309 -57692171 + FRAM SINE Alu 16 163 -13 1939 147 45 0 chr17 27746343 27746629 -57691851 + AluSx SINE Alu 3 301 -11 1229 299 31 28 chr17 27746657 27747404 -57691076 + L1ME3A LINE L1 4705 5453 -1087 2188 128 7 0 chr17 27747417 27747713 -57690767 - AluSx SINE Alu -14 298 1 2291 81 0 0 chr17 27747723 27748007 -57690473 - AluY SINE Alu -7 304 21 2198 180 69 65 chr17 27748109 27748599 -57689881 + L1ME2 LINE L1 5586 6073 -91 2183 116 7 3 chr17 27748599 27748909 -57689571 + AluSq SINE Alu 1 311 -2 2198 180 69 65 chr17 27748909 27748974 -57689506 + L1ME2 LINE L1 6073 6146 -18 2559 61 0 0 chr17 27748974 27749271 -57689209 + AluY SINE Alu 1 297 -14 413 270 127 36 chr17 27749304 27749654 -57688826 + L1ME3A LINE L1 5591 5986 -579 2116 124 0 13 chr17 27749813 27750112 -57688368 + AluSg SINE Alu 1 295 -15 964 136 34 0 chr17 27750112 27750259 -57688221 + AluSg/x SINE Alu 132 283 -27 225 0 0 0 chr17 27750259 27750284 -57688196 + (CA)n Simple_repeat Simple_repeat 2 26 0 421 211 135 58 chr17 27750320 27750528 -57687952 + L1ME3A LINE L1 6139 6362 -196 2130 117 7 0 chr17 27750914 27751223 -57687257 + AluSq SINE Alu 1 311 0 1546 190 42 47 chr17 27752941 27753325 -57685155 - MLT1B LTR MaLR -8 382 1 252 0 0 0 chr17 27753428 27753456 -57685024 + (TTCA)n Simple_repeat Simple_repeat 4 31 0 2419 86 0 0 chr17 27753718 27754009 -57684471 - AluSg SINE Alu -19 291 1 731 157 92 160 chr17 27755062 27755356 -57683124 + LTR12 LTR ERV1 1 274 -440 285 259 12 0 chr17 27755368 27755449 -57683031 + LTR30 LTR ERV1 539 620 -102 697 197 25 0 chr17 27755454 27755576 -57682904 + LTR12 LTR ERV1 360 484 -230 427 250 47 20 chr17 27756079 27756227 -57682253 + MIR SINE MIR 36 187 -75 545 225 28 62 chr17 27756276 27756454 -57682026 - MIR SINE MIR -43 219 48 2223 110 17 0 chr17 27756455 27756756 -57681724 - AluSx SINE Alu -6 306 1 2163 102 10 7 chr17 27757517 27757810 -57680670 + AluSc SINE Alu 1 294 -15 1063 138 0 0 chr17 27757810 27757955 -57680525 + AluSg/x SINE Alu 135 279 -31 271 18 89 0 chr17 27757957 27758013 -57680467 + (TA)n Simple_repeat Simple_repeat 1 61 0 490 231 8 8 chr17 27758052 27758173 -57680307 + MIR SINE MIR 105 225 -37 231 272 116 27 chr17 27758306 27758453 -57680027 - MIR3 SINE MIR -8 200 41 190 233 137 23 chr17 27758945 27759032 -57679448 - L2 LINE L2 -65 3227 3136 2051 139 14 0 chr17 27759442 27759736 -57678744 + AluSx SINE Alu 1 298 -14 552 275 134 40 chr17 27759982 27760356 -57678124 - MLT1J LTR MaLR -3 508 100 264 271 59 12 chr17 27760381 27760466 -57678014 - MER5A DNA MER1_type 0 189 101 2381 87 0 3 chr17 27760531 27760829 -57677651 + AluSq SINE Alu 7 303 -10 212 360 12 0 chr17 27761266 27761352 -57677128 - MIR SINE MIR -174 88 2 2643 111 205 147 chr17 27761627 27762543 -57675937 + LTR12 LTR ERV1 57 714 0 329 331 86 29 chr17 27763138 27763313 -57675167 - MER5A DNA MER1_type 0 189 5 189 381 58 13 chr17 27763580 27763735 -57674745 + MIR SINE MIR 14 175 -87 241 100 40 0 chr17 27763953 27764003 -57674477 + (TG)n Simple_repeat Simple_repeat 2 53 0 362 267 70 105 chr17 27764103 27764388 -57674092 - L1ME4a LINE L1 -4 6117 5843 2298 109 0 6 chr17 27764521 27764832 -57673648 - AluSx SINE Alu -2 310 2 595 294 72 28 chr17 27764986 27765427 -57673053 + L1ME4a LINE L1 5414 5873 -248 1751 147 23 36 chr17 27765980 27766286 -57672194 + AluJo SINE Alu 11 312 0 236 130 22 0 chr17 27766288 27766334 -57672146 + GA-rich Low_complexity Low_complexity 1 47 0 503 318 48 71 chr17 27766337 27766408 -57672072 + L1MEd LINE L1 564 635 -5484 2156 99 46 3 chr17 27766408 27766692 -57671788 + AluSx SINE Alu 1 296 -16 503 318 48 71 chr17 27766692 27766972 -57671508 + L1MEd LINE L1 635 907 -5212 445 269 185 36 chr17 27767716 27768024 -57670456 + L1ME4a LINE L1 5731 6084 -37 186 317 173 0 chr17 27768091 27768195 -57670285 + MIR SINE MIR 3 124 -138 * 658 216 32 63 chr17 27768194 27768384 -57670096 - L2 LINE L2 -2 3311 3128 333 259 24 0 chr17 27768391 27768476 -57670004 + MIR SINE MIR 162 248 -14 207 278 79 29 chr17 27769442 27769595 -57668885 - MIR SINE MIR -13 249 51 576 208 0 75 chr17 27769649 27769769 -57668711 - MER81 DNA DNA -1 113 3 2006 131 31 0 chr17 27770033 27770324 -57668156 + AluSq SINE Alu 1 300 -13 395 232 176 8 chr17 27770391 27770516 -57667964 + MIR3 SINE MIR 21 166 -42 464 225 33 3 chr17 27770545 27770671 -57667809 - MIR3 SINE MIR -53 155 19 411 235 61 35 chr17 27771116 27771231 -57667249 - MIR SINE MIR -139 123 6 196 200 0 80 chr17 27771394 27771444 -57667036 - L2 LINE L2 0 3272 3227 208 250 141 0 chr17 27771517 27771581 -57666899 - L2 LINE L2 -213 3059 2987 372 279 27 0 chr17 27771887 27771998 -57666482 - MIR SINE MIR -100 162 49 288 0 0 0 chr17 27772078 27772110 -57666370 + (A)n Simple_repeat Simple_repeat 1 32 0 186 347 71 47 chr17 27772133 27772430 -57666050 - L2 LINE L2 -15 3257 2954 330 279 86 79 chr17 27772562 27772589 -57665891 - MLT1K LTR MaLR -263 325 300 2052 108 18 4 chr17 27772589 27772894 -57665586 + AluSx SINE Alu 1 309 0 330 279 86 79 chr17 27772894 27773145 -57665335 - MLT1K LTR MaLR -288 300 44 2299 123 0 0 chr17 27773468 27773776 -57664704 + AluY SINE Alu 2 309 -2 2263 104 10 0 chr17 27775105 27775394 -57663086 + AluSg SINE Alu 1 292 -18 1059 316 23 25 chr17 27775466 27775951 -57662529 + MLT1K LTR MaLR 19 502 -86 354 291 240 0 chr17 27776878 27777057 -57661423 + MLT1L LTR MaLR 317 538 -77 1719 189 37 0 chr17 27777057 27777233 -57661247 - AluJo SINE Alu -4 308 115 216 0 0 0 chr17 27777233 27777257 -57661223 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1719 189 37 0 chr17 27777257 27777377 -57661103 - AluJo SINE Alu -197 115 1 523 227 42 0 chr17 27777411 27777530 -57660950 + MER5A DNA MER1_type 1 124 -65 551 178 0 0 chr17 27777532 27777633 -57660847 + AluSg/x SINE Alu 209 309 -1 204 188 71 94 chr17 27777633 27777718 -57660762 - MER5A DNA MER1_type -105 84 2 1432 116 0 0 chr17 27778151 27778341 -57660139 - AluSg/x SINE Alu -11 299 110 1433 174 0 0 chr17 27778482 27778712 -57659768 - AluSq SINE Alu -13 300 71 1965 84 4 8 chr17 27778813 27779063 -57659417 - AluSg SINE Alu -61 249 1 1003 198 0 12 chr17 27779072 27779239 -57659241 - AluJb SINE Alu -10 302 138 746 283 152 18 chr17 27779328 27779671 -57658809 + L2 LINE L2 2925 3313 0 1672 157 34 0 chr17 27779838 27780100 -57658380 - AluJb SINE Alu -15 297 27 1593 182 3 23 chr17 27780200 27780507 -57657973 - AluJo SINE Alu -11 301 1 2556 51 0 13 chr17 27780590 27780904 -57657576 - AluY SINE Alu 0 311 2 216 0 0 0 chr17 27781794 27781818 -57656662 + (A)n Simple_repeat Simple_repeat 1 24 0 2085 146 3 10 chr17 27781869 27782003 -57656477 + AluSx SINE Alu 1 134 -178 2064 135 10 7 chr17 27782003 27782307 -57656173 + AluSq SINE Alu 1 305 -8 2085 146 3 10 chr17 27782307 27782481 -57655999 + AluSx SINE Alu 134 307 -5 841 181 0 7 chr17 27782490 27782639 -57655841 + AluJb SINE Alu 160 307 -5 1760 151 42 0 chr17 27782639 27782923 -57655557 + AluSx SINE Alu 1 296 -16 319 152 0 0 chr17 27782926 27782972 -57655508 - L1MC4 LINE L1 -1339 6703 6658 23 33 0 0 chr17 27782978 27783008 -57655472 + AT_rich Low_complexity Low_complexity 1 30 0 953 129 7 7 chr17 27783460 27783615 -57654865 - AluY SINE Alu -21 290 136 2375 93 0 0 chr17 27783762 27784053 -57654427 + AluSc SINE Alu 1 291 -18 260 225 14 0 chr17 27784189 27784260 -57654220 + L1PB4 LINE L1 6068 6139 -17 2149 115 7 3 chr17 27784263 27784559 -57653921 - AluSg SINE Alu -13 297 1 295 116 0 0 chr17 27784619 27784701 -57653779 + Alu SINE Alu 240 321 0 2475 52 3 16 chr17 27784749 27785054 -57653426 + AluY SINE Alu 1 301 -10 2152 96 7 3 chr17 27785193 27785475 -57653005 + AluSx SINE Alu 1 283 -29 1788 166 3 0 chr17 27785694 27786008 -57652472 + AluY SINE Alu 1 311 0 711 245 148 9 chr17 27786021 27786237 -57652243 + MIR SINE MIR 7 252 -10 225 308 100 23 chr17 27786270 27786400 -57652080 - L2 LINE L2 -1 3271 3132 827 212 65 0 chr17 27786410 27786594 -57651886 + Charlie4 DNA MER1_type 1 196 -1765 686 98 0 0 chr17 27786596 27786688 -57651792 + AluSg/x SINE Alu 202 293 -16 209 196 0 43 chr17 27787083 27787129 -57651351 - MIR3 SINE MIR -17 191 148 1594 73 0 0 chr17 27787217 27787409 -57651071 + AluY SINE Alu 1 192 -119 850 200 12 0 chr17 27787509 27787679 -57650801 - L1MC3 LINE L1 -1060 6725 6554 466 184 11 0 chr17 27787696 27787783 -57650697 - FLAM_A SINE Alu -8 134 47 207 88 0 0 chr17 27787957 27787991 -57650489 + (TTAA)n Simple_repeat Simple_repeat 3 36 0 1994 129 7 17 chr17 27787995 27788282 -57650198 - AluSx SINE Alu -28 284 1 513 186 137 10 chr17 27788392 27788494 -57649986 + FLAM_C SINE Alu 3 117 -16 2564 77 0 0 chr17 27788501 27788812 -57649668 - AluY SINE Alu 0 311 1 2291 95 0 3 chr17 27788813 27789108 -57649372 - AluY SINE Alu -17 294 1 2346 89 10 0 chr17 27789109 27789400 -57649080 - AluSp SINE Alu -19 294 1 845 137 8 0 chr17 27789569 27789686 -57648794 - FLAM_C SINE Alu -15 118 1 464 239 99 42 chr17 27789752 27790086 -57648394 - L1MDa LINE L1 -3965 2575 2223 237 65 0 0 chr17 27790086 27790117 -57648363 + (TG)n Simple_repeat Simple_repeat 2 32 0 381 275 23 0 chr17 27790134 27790265 -57648215 + (TA)n Simple_repeat Simple_repeat 2 135 0 246 284 220 39 chr17 27790274 27790506 -57647974 + L2 LINE L2 2024 2297 -1017 869 214 82 53 chr17 27790726 27791082 -57647398 + L1MDa LINE L1 1836 2201 -4339 246 32 0 0 chr17 27791083 27791114 -57647366 + (TAGA)n Simple_repeat Simple_repeat 4 34 0 403 233 35 35 chr17 27791115 27791231 -57647249 + MIR SINE MIR 131 246 -16 2170 114 14 0 chr17 27791231 27791521 -57646959 + AluSx SINE Alu 1 294 -18 851 148 15 0 chr17 27791706 27791841 -57646639 - FAM SINE Alu -13 172 36 377 206 122 38 chr17 27791843 27791974 -57646506 - HAL1 LINE L1 -867 1640 1499 1237 126 0 0 chr17 27792011 27792185 -57646295 - AluSg/x SINE Alu -5 307 134 394 221 59 143 chr17 27792196 27792281 -57646199 - HAL1 LINE L1 -1026 1481 1390 2314 121 0 0 chr17 27792281 27792594 -57645886 + AluSq SINE Alu 1 313 0 394 221 59 143 chr17 27792594 27792934 -57645546 - HAL1 LINE L1 -1117 1390 1092 2326 115 0 6 chr17 27792964 27793278 -57645202 + AluSp SINE Alu 1 312 -1 1975 206 28 21 chr17 27793278 27793536 -57644944 + MER63B DNA MER1_type 1 265 -797 2295 100 3 3 chr17 27793536 27793836 -57644644 + AluSq SINE Alu 1 300 -13 1975 206 28 21 chr17 27793836 27794010 -57644470 + MER63B DNA MER1_type 265 436 0 2426 72 0 0 chr17 27794054 27794345 -57644135 + AluSg SINE Alu 1 291 -19 2375 107 0 0 chr17 27794505 27794814 -57643666 - AluSx SINE Alu -3 309 1 189 302 0 115 chr17 27794832 27794928 -57643552 - L2 LINE L2 -2 3270 3186 2458 97 0 0 chr17 27794939 27795248 -57643232 - AluSg SINE Alu -1 309 1 2207 105 3 0 chr17 27795448 27795757 -57642723 - AluSp SINE Alu 0 310 1 699 122 0 0 chr17 27795907 27796005 -57642475 - AluSc SINE Alu -14 295 198 188 328 35 0 chr17 27796015 27796073 -57642407 + L2 LINE L2 2684 2743 -571 2021 73 0 8 chr17 27796078 27796325 -57642155 + AluY SINE Alu 52 296 -15 579 179 74 0 chr17 27796758 27796853 -57641627 - AluJo/FRAM SINE Alu -15 297 196 2159 134 13 0 chr17 27796854 27797159 -57641321 - AluSx SINE Alu -3 309 1 21 0 0 0 chr17 27797231 27797252 -57641228 + AT_rich Low_complexity Low_complexity 1 21 0 2639 54 0 0 chr17 27797406 27797703 -57640777 + AluSc SINE Alu 1 297 -12 2099 118 17 3 chr17 27797743 27798039 -57640441 + AluSc SINE Alu 1 300 -9 2427 76 0 3 chr17 27798039 27798340 -57640140 + AluY SINE Alu 1 300 -11 2415 71 3 3 chr17 27798360 27798656 -57639824 + AluY SINE Alu 1 296 -15 1616 101 0 0 chr17 27798815 27799013 -57639467 + AluSg SINE Alu 1 198 -112 1218 120 0 0 chr17 27799013 27799171 -57639309 + AluSg/x SINE Alu 140 297 -15 2157 138 0 0 chr17 27799355 27799660 -57638820 + AluSx SINE Alu 1 305 -7 288 273 44 93 chr17 27800121 27800304 -57638176 - MIR SINE MIR -79 183 10 2123 96 0 58 chr17 27800617 27800758 -57637722 + AluY SINE Alu 1 116 -195 2368 79 0 13 chr17 27800758 27801063 -57637417 + AluY SINE Alu 1 301 -10 2123 96 0 58 chr17 27801063 27801234 -57637246 + AluY SINE Alu 116 295 -16 2172 125 3 0 chr17 27801475 27801780 -57636700 - AluSx SINE Alu -6 306 1 2019 142 3 0 chr17 27801792 27802080 -57636400 - AluSx SINE Alu -23 289 1 1819 244 36 12 chr17 27802105 27802695 -57635785 + L1M4 LINE L1 2373 2976 -3170 2271 105 3 0 chr17 27802718 27803012 -57635468 + AluSx SINE Alu 1 295 -17 782 167 8 30 chr17 27803021 27803153 -57635327 + FLAM_C SINE Alu 5 133 0 2449 123 30 88 chr17 27803158 27803220 -57635260 + L1MA4 LINE L1 5769 5833 -467 2383 88 0 0 chr17 27803220 27803515 -57634965 + AluSg SINE Alu 1 295 -15 2449 123 30 88 chr17 27803515 27803988 -57634492 + L1MA4 LINE L1 5833 6273 -27 747 168 129 43 chr17 27804128 27804337 -57634143 + MER58B DNA MER1_type 105 331 -10 1634 179 51 98 chr17 27804345 27804569 -57633911 + L1ME LINE L1 5073 5306 -860 1906 145 6 46 chr17 27804569 27804893 -57633587 + AluJo SINE Alu 1 311 -1 1634 179 51 98 chr17 27804893 27804942 -57633538 + L1ME LINE L1 5306 5356 -810 1696 164 7 43 chr17 27804942 27805247 -57633233 + AluJo SINE Alu 1 294 -18 1634 179 51 98 chr17 27805247 27805690 -57632790 + L1ME LINE L1 5356 5779 -387 37 52 0 0 chr17 27806623 27806681 -57631799 + GC_rich Low_complexity Low_complexity 1 58 0 28 0 0 0 chr17 27806815 27806843 -57631637 + GC_rich Low_complexity Low_complexity 1 28 0 2463 60 3 3 chr17 27807161 27807462 -57631018 - AluY SINE Alu -9 302 2 2463 57 20 0 chr17 27807863 27808159 -57630321 - AluY SINE Alu -9 302 1 2199 124 3 0 chr17 27808159 27808457 -57630023 - AluSx SINE Alu -13 299 1 1779 161 31 3 chr17 27808457 27808743 -57629737 - AluJo SINE Alu -18 294 1 2105 142 0 0 chr17 27808937 27809246 -57629234 - AluSx SINE Alu -3 309 1 2058 130 3 20 chr17 27809495 27809794 -57628686 - AluSx SINE Alu -18 294 1 1651 211 0 0 chr17 27809794 27810091 -57628389 - AluJo SINE Alu -15 297 1 2325 100 0 0 chr17 27810095 27810395 -57628085 - AluSc SINE Alu -9 300 1 2213 99 0 14 chr17 27810432 27810744 -57627736 - AluSg SINE Alu 0 310 1 434 243 127 114 chr17 27810868 27811308 -57627172 - L2 LINE L2 -19 3294 2849 467 234 0 19 chr17 27811361 27811468 -57627012 - FRAM SINE Alu -6 170 66 937 209 16 6 chr17 27811479 27811661 -57626819 - AluJo SINE Alu -7 305 122 1309 214 3 58 chr17 27811673 27811853 -57626627 - AluJo SINE Alu -21 291 133 2091 116 0 3 chr17 27811853 27812137 -57626343 + AluSg SINE Alu 5 287 -23 1309 214 3 58 chr17 27812137 27812264 -57626216 - AluJo SINE Alu -179 133 1 2399 78 3 7 chr17 27812285 27812594 -57625886 - AluY SINE Alu -3 308 1 1791 106 83 4 chr17 27812604 27812869 -57625611 - AluSc SINE Alu -23 286 1 1794 140 26 0 chr17 27813041 27813306 -57625174 - AluSx SINE Alu -24 288 17 1797 135 50 0 chr17 27813329 27813589 -57624891 - AluSx SINE Alu -23 289 17 456 176 154 27 chr17 27813608 27813804 -57624676 - L1MC/D LINE L1 -694 5472 5287 1083 156 24 143 chr17 27813837 27813864 -57624616 - L1MC/D LINE L1 -849 5297 5268 2174 98 28 0 chr17 27813864 27813986 -57624494 + AluY SINE Alu 1 118 -193 228 35 0 0 chr17 27813986 27814015 -57624465 + (CA)n Simple_repeat Simple_repeat 2 30 0 2174 98 28 0 chr17 27814015 27814179 -57624301 + AluY SINE Alu 118 295 -16 1083 156 24 143 chr17 27814179 27814216 -57624264 - L1MC/D LINE L1 -878 5268 5228 1883 156 9 19 chr17 27814216 27814531 -57623949 + AluJb SINE Alu 1 312 0 1083 156 24 143 chr17 27814531 27814613 -57623867 - L1MC/D LINE L1 -918 5228 5138 2188 138 0 3 chr17 27814613 27814924 -57623556 + AluSx SINE Alu 1 310 -2 1083 156 24 143 chr17 27814924 27815154 -57623326 - L1MC/D LINE L1 -1008 5138 4964 810 183 0 0 chr17 27815184 27815315 -57623165 - FLAM_C SINE Alu -12 131 1 915 176 0 0 chr17 27815370 27815518 -57622962 + AluSg/x SINE Alu 138 285 -27 792 79 22 0 chr17 27815518 27815657 -57622823 + (TA)n Simple_repeat Simple_repeat 2 143 0 864 255 85 17 chr17 27818879 27819232 -57619248 + L1MC4 LINE L1 7623 7999 -43 1977 139 4 0 chr17 27819327 27819608 -57618872 + AluJb SINE Alu 14 295 -17 677 229 193 0 chr17 27819942 27820160 -57618320 - MIR SINE MIR -1 261 2 1431 227 156 22 chr17 27820331 27820634 -57617846 - L1MC4 LINE L1 -371 7671 7410 1691 171 13 45 chr17 27820634 27820944 -57617536 + AluJb SINE Alu 2 301 -11 1431 227 156 22 chr17 27820944 27821261 -57617219 - L1MC4 LINE L1 -632 7410 6968 26 50 0 0 chr17 27821887 27821927 -57616553 + AT_rich Low_complexity Low_complexity 1 40 0 198 0 0 0 chr17 27822261 27822283 -57616197 + (TTTTTG)n Simple_repeat Simple_repeat 2 23 0 246 62 0 0 chr17 27822621 27822653 -57615827 + (T)n Simple_repeat Simple_repeat 1 32 0 195 280 0 67 chr17 27822675 27822750 -57615730 - MIR SINE MIR -91 171 102 2129 143 0 3 chr17 27825619 27825927 -57612553 + AluJb SINE Alu 1 307 -5 240 149 0 0 chr17 27825988 27826035 -57612445 + (T)n Simple_repeat Simple_repeat 1 47 0 2323 113 0 0 chr17 27827234 27827545 -57610935 + AluY SINE Alu 1 311 0 826 127 0 0 chr17 27827630 27827740 -57610740 + AluJb SINE Alu 178 287 -25 622 281 51 68 chr17 27827751 27828218 -57610262 - L1M4 LINE L1 -1529 4617 4159 1071 177 91 10 chr17 27828219 27828428 -57610052 - AluJo SINE Alu -5 307 82 510 225 70 80 chr17 27828654 27828730 -57609750 - MER2 DNA MER2_type -134 211 136 1277 190 145 22 chr17 27828730 27828999 -57609481 + AluJo SINE Alu 1 302 0 510 225 70 80 chr17 27828999 27829135 -57609345 - MER2 DNA MER2_type -209 136 1 1406 147 8 144 chr17 27829667 27830028 -57608452 + AluJb SINE Alu 1 312 0 817 189 0 20 chr17 27830028 27830176 -57608304 - FRAM SINE Alu -21 155 11 1998 156 3 0 chr17 27830188 27830483 -57607997 - AluJb SINE Alu -16 296 1 204 40 0 0 chr17 27830570 27830595 -57607885 + (GA)n Simple_repeat Simple_repeat 2 26 0 333 0 0 0 chr17 27830682 27830719 -57607761 + (TG)n Simple_repeat Simple_repeat 2 38 0 1235 166 41 68 chr17 27830757 27831052 -57607428 - L1MB7 LINE L1 -16 6168 5882 1874 154 14 7 chr17 27831125 27831411 -57607069 - AluJb SINE Alu -24 288 1 2528 170 44 2 chr17 27831414 27831891 -57606589 - L1MB3 LINE L1 -44 6139 5643 1903 94 0 0 chr17 27831893 27832128 -57606352 - AluSq SINE Alu -78 235 1 455 198 0 78 chr17 27832187 27832303 -57606177 - AluJb SINE Alu -119 193 87 425 275 52 2 chr17 27832342 27832582 -57605898 + MLT1J2 LTR MaLR 125 419 -31 497 258 106 71 chr17 27832633 27832648 -57605832 - MIR SINE MIR -57 205 192 1562 153 122 16 chr17 27832648 27832903 -57605577 - AluJo SINE Alu -30 282 1 497 258 106 71 chr17 27832903 27832959 -57605521 - MIR SINE MIR -70 192 139 1662 125 0 89 chr17 27832959 27833239 -57605241 - AluSx SINE Alu -21 291 37 497 258 106 71 chr17 27833239 27833364 -57605116 - MIR SINE MIR -123 139 1 225 234 16 47 chr17 27833577 27833641 -57604839 + MIR SINE MIR 201 262 0 823 211 93 35 chr17 27833660 27833863 -57604617 + MIR SINE MIR 10 229 -33 21 0 0 0 chr17 27834360 27834381 -57604099 + AT_rich Low_complexity Low_complexity 1 21 0 815 93 0 126 chr17 27834834 27834985 -57603495 + FLAM_C SINE Alu 1 132 -1 2317 118 0 6 chr17 27835077 27835391 -57603089 + AluSx SINE Alu 1 312 0 637 287 29 8 chr17 27835540 27835784 -57602696 - L2 LINE L2 -258 3055 2807 2248 100 13 7 chr17 27835787 27836097 -57602383 + AluSx SINE Alu 1 312 0 2118 124 10 13 chr17 27836333 27836640 -57601840 + AluSx SINE Alu 1 306 -6 909 229 68 16 chr17 27836847 27837096 -57601384 - MLT1H LTR MaLR -259 290 29 2523 45 3 0 chr17 27837222 27837514 -57600966 - AluY SINE Alu -18 293 1 189 0 0 0 chr17 27838511 27838532 -57599948 + (T)n Simple_repeat Simple_repeat 1 21 0 408 55 0 0 chr17 27838939 27838994 -57599486 + (GA)n Simple_repeat Simple_repeat 1 55 0 780 203 15 40 chr17 27839407 27839466 -57599014 - LTR26E LTR ERV1 -423 199 140 2345 90 3 0 chr17 27839466 27839766 -57598714 - AluSp SINE Alu -10 303 3 780 203 15 40 chr17 27839766 27839908 -57598572 - LTR26E LTR ERV1 -482 140 3 790 238 198 9 chr17 27839911 27840260 -57598220 + MLT1D LTR MaLR 82 496 -9 772 141 0 25 chr17 27840361 27840482 -57597998 - AluSg/x SINE Alu -11 299 182 1721 114 23 46 chr17 27840482 27840744 -57597736 + AluSx SINE Alu 44 299 -13 1183 67 0 0 chr17 27840744 27840878 -57597602 + AluSg SINE Alu 1 134 -176 2267 89 3 17 chr17 27840878 27841170 -57597310 + AluY SINE Alu 1 288 -23 3126 152 47 47 chr17 27841175 27841635 -57596845 + L1MA7 LINE L1 5635 6094 -197 2391 104 0 0 chr17 27841635 27841944 -57596536 - AluSg1 SINE Alu 0 309 1 3126 152 47 47 chr17 27841944 27842000 -57596480 + L1MA7 LINE L1 6094 6149 -142 725 181 16 8 chr17 27842000 27842127 -57596353 + FLAM_C SINE Alu 1 128 -5 3126 152 47 47 chr17 27842127 27842266 -57596214 + L1MA7 LINE L1 6148 6291 0 2016 133 25 0 chr17 27842275 27842561 -57595919 + AluSx SINE Alu 4 296 -16 1989 121 66 0 chr17 27842563 27842852 -57595628 + AluSg SINE Alu 1 308 -2 316 113 48 0 chr17 27842852 27842914 -57595566 + GA-rich Low_complexity Low_complexity 1 65 0 2384 61 0 51 chr17 27842914 27843227 -57595253 + AluY SINE Alu 1 297 -14 2143 133 0 3 chr17 27843678 27843971 -57594509 + AluSx SINE Alu 1 292 -20 538 170 259 0 chr17 27843982 27844094 -57594386 + AluJo SINE Alu 3 143 -169 331 260 34 62 chr17 27844094 27844140 -57594340 - MLT1G1 LTR MaLR -451 144 98 2216 125 152 11 chr17 27844140 27844515 -57593965 + MSTA LTR MaLR 1 428 0 331 260 34 62 chr17 27844515 27844614 -57593866 - MLT1G1 LTR MaLR -497 98 3 493 221 0 33 chr17 27844614 27844736 -57593744 + LTR16C LTR ERVL 374 491 0 2187 122 28 73 chr17 27844906 27844937 -57593543 - MSTA LTR MaLR -20 408 377 2225 110 0 0 chr17 27844937 27845267 -57593213 - AluSx SINE Alu 0 330 1 2187 122 28 73 chr17 27845267 27845483 -57592997 - MSTA LTR MaLR -51 377 184 2178 131 0 7 chr17 27845483 27845789 -57592691 + AluSx SINE Alu 1 304 -8 2187 122 28 73 chr17 27845789 27845966 -57592514 - MSTA LTR MaLR -244 184 1 29 28 0 0 chr17 27845973 27846009 -57592471 + AT_rich Low_complexity Low_complexity 1 36 0 2355 88 0 7 chr17 27846063 27846357 -57592123 + AluY SINE Alu 1 292 -19 275 271 43 0 chr17 27846622 27846692 -57591788 + MIR SINE MIR 118 190 -72 717 144 0 32 chr17 27846695 27846820 -57591660 - FLAM_C SINE Alu 0 143 23 2153 118 22 35 chr17 27846852 27846987 -57591493 + AluSq SINE Alu 2 137 -176 2512 67 0 10 chr17 27846987 27847300 -57591180 + AluY SINE Alu 1 310 -1 2153 118 22 35 chr17 27847300 27847477 -57591003 + AluSq SINE Alu 137 310 -3 417 304 24 8 chr17 27847480 27847605 -57590875 - MIR SINE MIR -13 249 123 1881 176 0 25 chr17 27848397 27848716 -57589764 - AluJo SINE Alu 0 312 2 1965 141 0 46 chr17 27848720 27848901 -57589579 - AluSx SINE Alu 0 312 151 2115 114 21 3 chr17 27848901 27849191 -57589289 - AluSg SINE Alu -15 295 1 1965 141 0 46 chr17 27849191 27849336 -57589144 - AluSx SINE Alu -161 151 1 781 191 0 22 chr17 27849348 27849484 -57588996 - FLAM_A SINE Alu 0 133 1 1415 234 117 5 chr17 27849510 27849955 -57588525 - L1ME3 LINE L1 -24 6138 5644 1608 175 25 7 chr17 27849956 27850230 -57588250 - AluJo SINE Alu -32 280 2 255 299 45 0 chr17 27850312 27850379 -57588101 - L2 LINE L2 0 3313 3244 556 133 0 0 chr17 27850402 27850477 -57588003 + AluS SINE Alu 2 76 -237 2183 112 6 22 chr17 27850586 27850898 -57587582 - AluSx SINE Alu -5 307 1 568 109 0 11 chr17 27850925 27851017 -57587463 - FLAM_A SINE Alu -10 132 42 368 199 56 12 chr17 27851030 27851134 -57587346 - MIR SINE MIR -69 139 45 230 301 7 37 chr17 27851656 27851792 -57586688 + GA-rich Low_complexity Low_complexity 4 135 0 200 108 0 27 chr17 27852417 27852454 -57586026 + (GGGA)n Simple_repeat Simple_repeat 4 39 0 245 288 0 54 chr17 27852457 27852568 -57585912 + G-rich Low_complexity Low_complexity 2 106 0 424 304 87 7 chr17 27854216 27854354 -57584126 + MIR SINE MIR 34 182 -80 229 307 11 11 chr17 27854415 27854503 -57583977 + L2 LINE L2 2865 2952 -320 2228 89 51 0 chr17 27854503 27854796 -57583684 - AluSx SINE Alu -4 308 1 2622 52 0 0 chr17 27854796 27855101 -57583379 - AluY SINE Alu -6 305 1 2047 128 21 3 chr17 27855101 27855391 -57583089 - AluSx SINE Alu -17 295 1 670 250 21 0 chr17 27855457 27855601 -57582879 + MIR SINE MIR 18 164 -98 667 212 0 29 chr17 27855604 27855741 -57582739 + FLAM_A SINE Alu 1 133 0 717 64 0 21 chr17 27855798 27855892 -57582588 + AluS SINE Alu 2 93 -220 1704 115 58 0 chr17 27855897 27856140 -57582340 - AluSq SINE Alu -56 257 1 984 125 13 13 chr17 27856262 27856414 -57582066 - AluSx SINE Alu -159 153 2 212 361 0 12 chr17 27856507 27856590 -57581890 + MIR SINE MIR 92 173 -89 1086 208 33 0 chr17 27857004 27857216 -57581264 - MER20 DNA MER1_type 0 219 1 565 258 23 0 chr17 27858201 27858329 -57580151 + MER5A DNA MER1_type 37 167 -22 197 314 73 66 chr17 27858696 27858833 -57579647 + L2 LINE L2 3176 3313 0 2341 83 0 0 chr17 27858837 27859160 -57579320 + AluY SINE Alu 1 323 0 183 255 59 0 chr17 27859357 27859408 -57579072 + MER5C DNA MER1_type 87 140 -184 2319 101 7 0 chr17 27859892 27860190 -57578290 - AluSx SINE Alu -12 300 1 1167 118 56 130 chr17 27860190 27860460 -57578020 + LTR26E LTR ERV1 250 499 -123 22 35 0 0 chr17 27860460 27860489 -57577991 + AT_rich Low_complexity Low_complexity 1 29 0 2046 125 7 0 chr17 27860489 27860785 -57577695 - AluSx SINE Alu -10 302 5 801 187 0 0 chr17 27860790 27860924 -57577556 + LTR26B LTR ERV1 398 531 0 1701 171 0 13 chr17 27860949 27861248 -57577232 + AluJb SINE Alu 1 295 -17 2127 98 7 0 chr17 27861254 27861551 -57576929 + AluSq SINE Alu 1 299 -14 235 171 29 100 chr17 27861555 27861625 -57576855 - MLT1D LTR MaLR -428 77 13 1709 144 18 3 chr17 27862190 27862474 -57576006 - AluSx SINE Alu -24 288 1 906 268 56 56 chr17 27862476 27862675 -57575805 - L2 LINE L2 -16 3297 3099 1946 120 3 0 chr17 27862675 27862958 -57575522 + AluSx SINE Alu 16 299 -13 906 268 56 56 chr17 27862958 27863184 -57575296 - L2 LINE L2 -213 3100 2872 1304 227 221 17 chr17 27863545 27864020 -57574460 + MLT1E2 LTR MaLR 55 626 0 2046 113 0 0 chr17 27864268 27864560 -57573920 + AluSx SINE Alu 1 292 -20 402 272 117 61 chr17 27865264 27865359 -57573121 + MIR SINE MIR 47 135 -127 2119 115 0 0 chr17 27865359 27865654 -57572826 + AluSx SINE Alu 1 295 -17 402 272 117 61 chr17 27865654 27865738 -57572742 + MIR SINE MIR 135 236 -26 822 65 9 0 chr17 27865896 27866003 -57572477 - AluSg/x SINE Alu -12 297 190 864 145 7 13 chr17 27866103 27866255 -57572225 + AluSg/x SINE Alu 160 310 -2 2217 111 0 7 chr17 27866477 27866783 -57571697 - AluSc SINE Alu -5 304 1 222 302 0 69 chr17 27867759 27867875 -57570605 - MIR SINE MIR -50 212 105 567 236 82 48 chr17 27867947 27868155 -57570325 + MIR SINE MIR 37 251 -11 2220 98 0 0 chr17 27868297 27868602 -57569878 - AluSx SINE Alu -7 305 1 562 292 47 43 chr17 27868697 27868974 -57569506 + L2 LINE L2 2820 3097 -216 1955 147 0 3 chr17 27869028 27869341 -57569139 - AluSx SINE Alu 0 312 1 1963 137 7 0 chr17 27870994 27871287 -57567193 + AluSx SINE Alu 1 295 -17 381 273 59 51 chr17 27871908 27872070 -57566410 - MIR SINE MIR -66 142 17 851 199 12 6 chr17 27872282 27872448 -57566032 + FRAM SINE Alu 6 172 -4 27 49 0 0 chr17 27872529 27872570 -57565910 + AT_rich Low_complexity Low_complexity 1 41 0 1726 171 0 13 chr17 27872571 27872870 -57565610 + AluJb SINE Alu 1 295 -17 2604 19 7 3 chr17 27873093 27873401 -57565079 + AluY SINE Alu 1 309 -2 1905 136 0 0 chr17 27876133 27876413 -57562067 - AluSq SINE Alu -33 280 1 21 0 0 0 chr17 27876463 27876484 -57561996 + AT_rich Low_complexity Low_complexity 1 21 0 921 136 0 0 chr17 27876485 27876617 -57561863 - FLAM_C SINE Alu -1 132 1 1403 159 82 0 chr17 27876938 27877208 -57561272 + AluJb SINE Alu 1 292 -20 1443 137 171 23 chr17 27877613 27877876 -57560604 + AluSx SINE Alu 1 302 0 954 161 0 0 chr17 27877878 27878047 -57560433 + AluSg/x SINE Alu 132 300 0 211 348 186 0 chr17 27878278 27878531 -57559949 - L2 LINE L2 -1075 2239 1940 2011 138 0 0 chr17 27878602 27878906 -57559574 - AluSx SINE Alu 0 312 9 515 272 75 0 chr17 27878924 27879071 -57559409 - Charlie8 DNA MER1_type -2259 158 1 427 194 65 0 chr17 27879502 27879595 -57558885 - MER113 DNA MER1_type? -62 459 361 880 139 0 0 chr17 27879596 27879725 -57558755 + FLAM_C SINE Alu 1 129 -4 356 207 62 110 chr17 27879747 27879802 -57558678 - MER113 DNA MER1_type? -148 373 317 2000 92 46 0 chr17 27879802 27880083 -57558397 - AluSg SINE Alu -16 294 1 929 213 0 6 chr17 27880086 27880255 -57558225 - FAM SINE Alu -6 169 2 356 207 62 110 chr17 27880255 27880340 -57558140 - MER113 DNA MER1_type? -206 315 236 1023 145 57 0 chr17 27880553 27880746 -57557734 - L1MB3 LINE L1 -1 6182 5979 263 290 84 37 chr17 27880787 27880894 -57557586 + MIR SINE MIR 107 218 -44 460 295 93 16 chr17 27881518 27881711 -57556769 + L3 LINE CR1 885 1092 -485 380 317 72 19 chr17 27881752 27881960 -57556520 - MIR SINE MIR -24 238 20 837 228 73 10 chr17 27882356 27882562 -57555918 + MIR SINE MIR 14 232 -30 1988 116 0 3 chr17 27882593 27882910 -57555570 + AluSx SINE Alu 1 316 0 245 302 94 0 chr17 27882947 27883043 -57555437 + L2 LINE L2 3132 3236 -36 1700 258 111 15 chr17 27883052 27883594 -57554886 + MLT1G1 LTR MaLR 1 594 -1 1783 222 44 17 chr17 27884129 27884604 -57553876 + MER69 DNA AcHobo 1 518 -2008 1006 109 0 0 chr17 27884663 27884800 -57553680 + AluSq/x SINE Alu 1 137 -176 1981 127 0 13 chr17 27884800 27885099 -57553381 + AluSq SINE Alu 1 295 -18 29 0 0 0 chr17 27885099 27885128 -57553352 + AT_rich Low_complexity Low_complexity 1 29 0 436 230 11 0 chr17 27885327 27885414 -57553066 - L2 LINE L2 -1 3271 3184 312 160 0 20 chr17 27885678 27885728 -57552752 - Alu SINE Alu -250 52 4 2206 92 3 0 chr17 27885754 27886046 -57552434 + AluSq SINE Alu 1 293 -20 1195 205 40 78 chr17 27886197 27886568 -57551912 + MSTD LTR MaLR 1 357 -39 642 243 10 15 chr17 27886660 27886866 -57551614 - L1ME LINE L1 -703 5463 5259 456 196 45 9 chr17 27886912 27887024 -57551456 - L1ME LINE L1 -885 5261 5146 21 57 0 0 chr17 27887040 27887075 -57551405 + AT_rich Low_complexity Low_complexity 1 35 0 2810 156 17 125 chr17 27887097 27887271 -57551209 - LTR34 LTR ERV1 -2 697 506 2224 88 3 0 chr17 27887271 27887565 -57550915 + AluSp SINE Alu 1 295 -18 2810 156 17 125 chr17 27887565 27888172 -57550308 - LTR34 LTR ERV1 -193 506 1 383 176 0 0 chr17 27888484 27888552 -57549928 + AluJ/FLAM SINE Alu 1 68 -234 1511 147 32 29 chr17 27888584 27888883 -57549597 + AluJb SINE Alu 3 302 0 267 178 0 22 chr17 27889103 27889148 -57549332 + Alu SINE Alu 1 44 -258 653 262 41 22 chr17 27889222 27889493 -57548987 + L1M4 LINE L1 4204 4479 -1667 1901 146 3 3 chr17 27890306 27890607 -57547873 - AluJb SINE Alu -11 301 1 277 186 29 0 chr17 27890637 27890699 -57547781 - MER69 DNA AcHobo -6 2520 2454 1649 164 41 0 chr17 27890699 27890992 -57547488 - AluJb SINE Alu -7 305 1 228 234 78 13 chr17 27891186 27891263 -57547217 - L2 LINE L2 -21 3251 3170 831 232 0 0 chr17 27891365 27891529 -57546951 + MIR SINE MIR 79 242 -20 189 213 0 0 chr17 27891673 27891720 -57546760 + (TG)n Simple_repeat Simple_repeat 2 48 0 263 383 41 13 chr17 27891835 27892151 -57546329 - L2 LINE L2 -424 2890 2566 2053 117 0 3 chr17 27892363 27892662 -57545818 - AluSq SINE Alu -15 298 1 947 111 0 7 chr17 27892772 27892907 -57545573 + AluJb SINE Alu 1 134 -178 1412 182 78 4 chr17 27893374 27893737 -57544743 + AluJb SINE Alu 2 302 0 241 333 30 0 chr17 27893865 27893964 -57544516 - MER113 DNA MER1_type? -417 104 3 269 176 14 68 chr17 27893967 27894041 -57544439 - MIR3 SINE MIR -49 159 90 1174 223 56 75 chr17 27894047 27894514 -57543966 - MLT1J LTR MaLR 0 511 54 636 162 45 78 chr17 27894514 27894583 -57543897 - MER69 DNA AcHobo -3 2523 2453 2292 60 10 10 chr17 27894583 27894882 -57543598 + AluY SINE Alu 1 299 -12 636 162 45 78 chr17 27894882 27894991 -57543489 - MER69 DNA AcHobo -73 2453 2351 189 0 0 0 chr17 27895467 27895488 -57542992 + (TA)n Simple_repeat Simple_repeat 1 21 0 577 103 0 0 chr17 27895488 27895566 -57542914 - AluJ/FLAM SINE Alu -232 80 3 40 67 0 0 chr17 27895807 27895882 -57542598 + AT_rich Low_complexity Low_complexity 1 75 0 2326 80 0 3 chr17 27896790 27897092 -57541388 - AluY SINE Alu -6 305 5 2046 103 10 0 chr17 27897246 27897538 -57540942 - AluSg SINE Alu -15 295 1 604 161 11 0 chr17 27897617 27897710 -57540770 - FLAM_C SINE Alu -24 119 26 2017 141 0 0 chr17 27897735 27898032 -57540448 + AluSx SINE Alu 1 297 -15 1418 108 126 83 chr17 27898037 27898314 -57540166 + AluSx SINE Alu 1 289 -23 2160 62 3 49 chr17 27898322 27898659 -57539821 + AluY SINE Alu 1 311 0 546 226 62 14 chr17 27898735 27898881 -57539599 - L2 LINE L2 0 3313 3161 296 258 97 32 chr17 27898924 27899048 -57539432 - L2 LINE L2 -444 2870 2739 1726 170 0 3 chr17 27899057 27899346 -57539134 - AluJo SINE Alu -24 288 1 254 158 0 0 chr17 27899404 27899442 -57539038 + LTR56 LTR ERV1 352 389 -56 23 0 0 0 chr17 27899442 27899465 -57539015 + AT_rich Low_complexity Low_complexity 1 23 0 186 373 93 8 chr17 27899465 27899583 -57538897 - L2 LINE L2 -615 2699 2572 1821 151 0 10 chr17 27899773 27900064 -57538416 - AluSx SINE Alu -24 288 1 1738 161 0 20 chr17 27900076 27900374 -57538106 - AluJo SINE Alu -20 292 1 834 168 0 7 chr17 27900376 27900513 -57537967 - AluJo SINE Alu -176 136 1 1948 101 40 0 chr17 27900534 27900810 -57537670 - AluSx SINE Alu -22 290 4 374 130 0 14 chr17 27900812 27900881 -57537599 + Alu SINE Alu 233 300 0 205 191 0 0 chr17 27901014 27901056 -57537424 + A-rich Low_complexity Low_complexity 2 43 0 29 0 0 0 chr17 27902482 27902511 -57535969 + GC_rich Low_complexity Low_complexity 1 29 0 440 62 0 15 chr17 27902577 27902642 -57535838 + (CGG)n Simple_repeat Simple_repeat 2 65 0 222 237 175 93 chr17 27902792 27902889 -57535591 - MIR3 SINE MIR -44 164 60 184 309 29 0 chr17 27902889 27902957 -57535523 + L2 LINE L2 3182 3251 -62 672 286 44 36 chr17 27903571 27903819 -57534661 + MIR SINE MIR 13 262 0 2305 27 0 44 chr17 27903860 27904179 -57534301 - AluY SINE Alu 0 306 1 374 322 103 35 chr17 27904489 27904663 -57533817 - MIR3 SINE MIR 0 208 23 333 320 78 0 chr17 27904636 27904764 -57533716 + MIR SINE MIR 64 201 -61 * 1589 168 20 3 chr17 27905151 27905448 -57533032 + AluJo SINE Alu 1 302 -10 2248 96 0 0 chr17 27905456 27905749 -57532731 + AluSx SINE Alu 1 293 -19 1150 171 49 68 chr17 27906067 27906165 -57532315 + AluJo SINE Alu 45 143 -169 2077 117 0 0 chr17 27906165 27906463 -57532017 + AluSx SINE Alu 8 305 -7 1150 171 49 68 chr17 27906463 27906628 -57531852 + AluJo SINE Alu 143 303 -9 732 251 61 0 chr17 27906634 27906797 -57531683 + MIR SINE MIR 28 200 -62 2128 91 14 3 chr17 27906805 27907102 -57531378 + AluSq SINE Alu 1 300 -13 990 165 6 0 chr17 27907107 27907265 -57531215 + AluJb SINE Alu 133 291 -21 230 116 23 0 chr17 27907265 27907308 -57531172 + (TA)n Simple_repeat Simple_repeat 1 44 0 380 273 0 40 chr17 27907308 27907407 -57531073 + L1MC4 LINE L1 6609 6703 -1339 * 394 264 23 0 chr17 27907338 27907425 -57531055 - L1MC4 LINE L1 -1340 6702 6614 228 246 0 33 chr17 27907425 27907486 -57530994 + MIR SINE MIR 196 254 -8 508 260 118 44 chr17 27908720 27908924 -57529556 + MIR SINE MIR 13 231 -31 8028 48 35 1 chr17 27909019 27909699 -57528781 + LTR13 LTR ERVK 1 725 -282 195 42 0 0 chr17 27909699 27909723 -57528757 + (TC)n Simple_repeat Simple_repeat 2 25 0 8028 48 35 1 chr17 27909723 27910016 -57528464 + LTR13 LTR ERVK 725 1007 0 1575 103 50 132 chr17 27910099 27910418 -57528062 - AluJb SINE Alu -16 296 4 189 147 0 0 chr17 27910437 27910471 -57528009 + (CATA)n Simple_repeat Simple_repeat 2 35 0 312 232 0 0 chr17 27910674 27910730 -57527750 - MER2 DNA MER2_type 0 345 290 * 777 238 29 0 chr17 27910713 27910885 -57527595 - MER8 DNA MER2_type -60 179 3 1201 164 25 0 chr17 27910898 27911099 -57527381 + MER7A DNA MER2_type 2 205 -141 880 200 110 41 chr17 27911064 27911292 -57527188 + MER21B LTR ERV1 599 847 -16 * 2045 151 0 0 chr17 27911292 27911590 -57526890 + AluJb SINE Alu 1 298 -14 880 200 110 41 chr17 27911590 27911606 -57526874 + MER21B LTR ERV1 847 860 -3 180 0 0 0 chr17 27911650 27911670 -57526810 + (TA)n Simple_repeat Simple_repeat 2 21 0 2092 134 10 3 chr17 27912093 27912400 -57526080 - AluSx SINE Alu -3 309 1 2293 71 39 0 chr17 27912401 27912684 -57525796 - AluSq SINE Alu -19 294 1 1767 115 108 26 chr17 27912688 27912957 -57525523 - AluSx SINE Alu -21 291 1 2072 73 0 0 chr17 27913115 27913360 -57525120 - AluSc SINE Alu -64 245 1 2316 113 3 3 chr17 27913475 27913785 -57524695 - AluSg SINE Alu 0 310 1 24 32 0 0 chr17 27914428 27914459 -57524021 + AT_rich Low_complexity Low_complexity 1 31 0 22 56 0 0 chr17 27914809 27914845 -57523635 + AT_rich Low_complexity Low_complexity 1 36 0 1278 224 138 98 chr17 27914867 27915496 -57522984 + MER21B LTR ERV1 17 675 -188 2844 187 66 61 chr17 27915496 27916219 -57522261 + LTR8A LTR ERV1 1 727 0 1278 224 138 98 chr17 27916219 27916251 -57522229 + MER21B LTR ERV1 675 704 -159 7412 162 66 63 chr17 27916251 27917798 -57520682 - MER52A LTR ERV1 0 1755 204 2192 93 0 17 chr17 27918477 27918767 -57519713 + AluSc SINE Alu 1 285 -24 236 119 0 0 chr17 27918768 27918810 -57519670 + Alu SINE Alu 259 300 -2 1374 153 63 9 chr17 27919077 27919300 -57519180 + AluJb SINE Alu 1 235 -77 1886 122 22 11 chr17 27919435 27919705 -57518775 - AluSg SINE Alu -37 273 1 188 293 86 0 chr17 27919866 27919924 -57518556 + L2 LINE L2 3143 3205 -67 453 299 108 23 chr17 27920168 27920382 -57518098 + MIR SINE MIR 20 251 -11 299 228 97 26 chr17 27920419 27920533 -57517947 + MIR SINE MIR 24 145 -63 1880 140 0 47 chr17 27920664 27920964 -57517516 + AluJb SINE Alu 1 286 -26 434 175 38 0 chr17 27921313 27921393 -57517087 - Tigger5 DNA MER2_type 0 2323 2241 1900 164 3 0 chr17 27921393 27921680 -57516800 + AluJb SINE Alu 1 288 -24 279 133 0 0 chr17 27921722 27921767 -57516713 + (A)n Simple_repeat Simple_repeat 1 45 0 2369 70 0 17 chr17 27921775 27922075 -57516405 + AluY SINE Alu 1 295 -16 1059 175 0 17 chr17 27922128 27922305 -57516175 - AluJb SINE Alu -7 305 132 2141 112 3 7 chr17 27922326 27922620 -57515860 - AluSx SINE Alu -15 297 5 2408 74 0 23 chr17 27922627 27922937 -57515543 - AluY SINE Alu -8 303 1 1205 198 115 22 chr17 27922937 27923215 -57515265 - AluJo SINE Alu -8 304 1 1797 171 3 3 chr17 27923566 27923859 -57514621 - AluJo SINE Alu -19 293 1 1920 177 7 0 chr17 27924135 27924440 -57514040 + AluJb SINE Alu 1 307 -5 328 228 40 20 chr17 27924642 27924743 -57513737 - MER50 LTR ERV1 -130 604 502 2434 82 0 3 chr17 27925330 27925636 -57512844 - AluSg SINE Alu -5 305 1 769 171 0 0 chr17 27925833 27925950 -57512530 - AluJb SINE Alu -38 274 158 225 0 0 0 chr17 27926253 27926278 -57512202 + (CAG)n Simple_repeat Simple_repeat 2 26 0 23 0 0 0 chr17 27927163 27927186 -57511294 + AT_rich Low_complexity Low_complexity 1 23 0 1923 129 4 11 chr17 27927186 27927464 -57511016 + AluSx SINE Alu 1 276 -36 405 215 0 0 chr17 27927475 27927568 -57510912 + (TATG)n Simple_repeat Simple_repeat 4 96 0 2367 96 3 3 chr17 27927674 27927977 -57510503 - AluSq SINE Alu -2 311 9 416 133 12 60 chr17 27927977 27928060 -57510420 + MLT1F LTR MaLR 401 479 -63 6015 106 61 28 chr17 27928060 27930508 -57507972 + SVA Other Other 41 1381 -5 180 0 0 0 chr17 27930558 27930578 -57507902 + (A)n Simple_repeat Simple_repeat 1 20 0 1125 175 0 11 chr17 27930659 27930836 -57507644 - AluJo SINE Alu -128 184 10 294 329 61 24 chr17 27931219 27931383 -57507097 + L2 LINE L2 2434 2603 -711 554 150 165 8 chr17 27931454 27931587 -57506893 - L1MC5 LINE L1 -97 7864 7711 613 320 78 43 chr17 27931603 27932082 -57506398 + L2 LINE L2 2719 3221 -92 1482 170 88 32 chr17 27932082 27932365 -57506115 + AluJo SINE Alu 3 301 -11 613 320 78 43 chr17 27932365 27932458 -57506022 + L2 LINE L2 3221 3309 -4 25 0 0 0 chr17 27932550 27932575 -57505905 + AT_rich Low_complexity Low_complexity 1 25 0 2210 109 0 22 chr17 27933533 27933846 -57504634 - AluSx SINE Alu -6 306 1 2613 152 9 52 chr17 27933934 27934339 -57504141 - L1MB7 LINE L1 -16 6168 5790 2060 129 0 40 chr17 27934339 27934664 -57503816 - AluJo SINE Alu 0 312 1 2613 152 9 52 chr17 27934664 27934799 -57503681 - L1MB7 LINE L1 -394 5790 5651 909 211 7 0 chr17 27934800 27934952 -57503528 - FRAM SINE Alu -31 145 1 2204 129 3 0 chr17 27934959 27935270 -57503210 - AluSp SINE Alu -1 312 1 1826 169 3 3 chr17 27935278 27935568 -57502912 - AluJb SINE Alu -22 290 1 1887 160 3 16 chr17 27935570 27935882 -57502598 - AluJo SINE Alu -4 308 1 1694 136 49 43 chr17 27935882 27936228 -57502252 - L1MB7 LINE L1 -513 5667 5320 2288 74 0 7 chr17 27936241 27936525 -57501955 - AluY SINE Alu -29 282 1 1373 188 12 16 chr17 27936529 27936779 -57501701 - AluJo SINE Alu -20 292 44 21 0 0 0 chr17 27936819 27936840 -57501640 + AT_rich Low_complexity Low_complexity 1 21 0 583 158 67 42 chr17 27936845 27936865 -57501615 - FLAM_C SINE Alu -184 128 110 2192 127 3 0 chr17 27936865 27937165 -57501315 + AluSx SINE Alu 1 301 -11 583 158 67 42 chr17 27937165 27937264 -57501216 - FLAM_C SINE Alu -202 110 6 1444 231 55 25 chr17 27937393 27937441 -57501039 + Cheshire DNA MER1_type 37 82 -2338 2022 122 56 0 chr17 27937441 27937728 -57500752 - AluSx SINE Alu -9 303 1 1444 231 55 25 chr17 27937728 27938077 -57500403 + Cheshire DNA MER1_type 82 446 -1974 3387 161 60 2 chr17 27938092 27938705 -57499775 + Cheshire DNA MER1_type 1772 2420 0 2296 92 3 13 chr17 27938877 27939191 -57499289 + AluY SINE Alu 1 311 0 1810 121 111 4 chr17 27939585 27939865 -57498615 - AluSx SINE Alu -2 310 1 2240 117 0 0 chr17 27940032 27940331 -57498149 + AluY SINE Alu 1 299 -12 2194 110 7 0 chr17 27940660 27940952 -57497528 - AluSx SINE Alu -18 294 1 189 0 0 0 chr17 27942188 27942209 -57496271 + (T)n Simple_repeat Simple_repeat 1 21 0 2336 83 17 3 chr17 27942520 27942820 -57495660 - AluSc SINE Alu -5 304 1 733 132 9 9 chr17 27944001 27944115 -57494365 - FLAM_C SINE Alu -17 126 13 916 173 147 0 chr17 27944242 27944433 -57494047 - MER20 DNA MER1_type 0 219 1 2352 92 10 0 chr17 27944674 27944980 -57493500 - AluY SINE Alu -2 309 1 1115 190 107 76 chr17 27944980 27945269 -57493211 - AluJo SINE Alu -4 298 1 1716 177 0 32 chr17 27946037 27946347 -57492133 - AluJo SINE Alu -12 300 1 266 286 105 52 chr17 27946390 27946638 -57491842 + L2 LINE L2 2831 3091 -181 1717 81 5 9 chr17 27946697 27946919 -57491561 + AluSg SINE Alu 1 221 -89 999 53 0 0 chr17 27947455 27947568 -57490912 - AluY SINE Alu -197 114 2 976 188 20 5 chr17 27947669 27947866 -57490614 + MER3 DNA MER1_type 6 205 -4 1816 160 11 4 chr17 27948171 27948499 -57489981 + AluSx SINE Alu 1 330 0 440 219 20 62 chr17 27948661 27948807 -57489673 + L1MC4 LINE L1 7903 8042 0 1464 165 4 20 chr17 27949339 27949588 -57488892 + AluSx SINE Alu 54 298 -14 1286 162 61 4 chr17 27950621 27950899 -57487581 - MER33 DNA MER1_type 0 324 31 1464 124 34 21 chr17 27951298 27951309 -57487171 + MER46A DNA MER2_type 1 10 -2721 2066 113 11 0 chr17 27951309 27951593 -57486887 - AluSg SINE Alu -8 302 16 1464 124 34 21 chr17 27951593 27951814 -57486666 + MER46A DNA MER2_type 10 236 0 2228 93 10 0 chr17 27952201 27952491 -57485989 - AluSq SINE Alu -20 293 1 23 0 0 0 chr17 27952530 27952553 -57485927 + AT_rich Low_complexity Low_complexity 1 23 0 180 216 0 0 chr17 27953168 27953205 -57485275 - MIR SINE MIR -70 192 156 223 118 0 0 chr17 27953481 27953515 -57484965 - MIR SINE MIR -119 143 110 1001 193 0 0 chr17 27953652 27953823 -57484657 + FRAM SINE Alu 1 166 -10 27 49 0 0 chr17 27953881 27953922 -57484558 + AT_rich Low_complexity Low_complexity 1 41 0 694 181 84 0 chr17 27954408 27954563 -57483917 + L1MB4 LINE L1 6007 6174 -6 2240 117 0 10 chr17 27954602 27954909 -57483571 - AluSx SINE Alu -8 304 1 429 343 98 0 chr17 27954915 27955017 -57483463 - L1ME LINE L1 -297 5824 5733 1750 166 0 27 chr17 27955017 27955318 -57483162 - AluJb SINE Alu -19 293 1 429 343 98 0 chr17 27955318 27955512 -57482968 - L1ME LINE L1 -388 5733 5499 249 282 77 17 chr17 27956168 27956285 -57482195 - MIR SINE MIR -66 142 19 270 167 36 0 chr17 27956385 27956469 -57482011 + (TA)n Simple_repeat Simple_repeat 2 88 0 1658 178 3 24 chr17 27956473 27956766 -57481714 + AluJo SINE Alu 6 292 -20 180 77 0 0 chr17 27956774 27956800 -57481680 + (TG)n Simple_repeat Simple_repeat 1 26 0 1252 90 34 17 chr17 27956811 27956989 -57481491 - Tigger1 DNA MER2_type -1006 1412 1232 1503 206 14 0 chr17 27956989 27957266 -57481214 - AluJo SINE Alu -8 304 24 9038 95 40 62 chr17 27957271 27957528 -57480952 + Tigger1 DNA MER2_type 965 1226 -1192 1556 65 5 0 chr17 27957528 27957713 -57480767 + AluY SINE Alu 112 297 -14 9038 95 40 62 chr17 27957713 27958837 -57479643 + Tigger1 DNA MER2_type 1226 2314 -104 1969 156 0 10 chr17 27958837 27959139 -57479341 - AluSx SINE Alu -13 299 1 9038 95 40 62 chr17 27959139 27959242 -57479238 + Tigger1 DNA MER2_type 2314 2418 0 1166 149 0 0 chr17 27959506 27959674 -57478806 - AluSx SINE Alu -17 295 128 2515 67 10 0 chr17 27959680 27959979 -57478501 - AluY SINE Alu -5 306 5 232 82 20 20 chr17 27959990 27960039 -57478441 + (TTTTG)n Simple_repeat Simple_repeat 4 52 0 910 123 0 0 chr17 27960043 27960165 -57478315 - AluSx SINE Alu -190 122 1 1767 153 11 11 chr17 27960167 27960448 -57478032 - AluJb SINE Alu -21 291 11 2007 136 4 0 chr17 27960817 27961096 -57477384 + AluSx SINE Alu 1 280 -32 1208 161 109 5 chr17 27961271 27961482 -57476998 - MER46A DNA MER2_type -1 235 3 421 246 89 59 chr17 27961586 27961822 -57476658 - MIR SINE MIR 0 262 20 1066 165 0 0 chr17 27962199 27962357 -57476123 + FRAM SINE Alu 1 151 -25 1972 103 34 17 chr17 27962386 27962678 -57475802 + AluSc SINE Alu 1 297 -12 2468 66 0 10 chr17 27963301 27963606 -57474874 - AluY SINE Alu -9 302 1 1949 180 45 3 chr17 27963631 27963965 -57474515 - MER7A DNA MER2_type 0 346 1 3413 177 105 11 chr17 27964175 27964920 -57473560 - L1MC3 LINE L1 0 7785 6971 21 0 0 0 chr17 27965080 27965101 -57473379 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr17 27965660 27965688 -57472792 + AT_rich Low_complexity Low_complexity 1 28 0 2280 91 0 0 chr17 27967957 27968243 -57470237 + AluY SINE Alu 17 302 -9 763 213 0 0 chr17 27968243 27968365 -57470115 - AluJb SINE Alu -189 123 2 2100 142 0 10 chr17 27968634 27968944 -57469536 - AluSx SINE Alu -5 307 1 22 80 0 0 chr17 27969204 27969254 -57469226 + AT_rich Low_complexity Low_complexity 1 50 0 26 0 0 0 chr17 27969409 27969435 -57469045 + AT_rich Low_complexity Low_complexity 1 26 0 23 0 0 0 chr17 27969679 27969702 -57468778 + AT_rich Low_complexity Low_complexity 1 23 0 1935 138 0 14 chr17 27969706 27969989 -57468491 - AluSx SINE Alu -30 282 4 1865 147 20 3 chr17 27970100 27970392 -57468088 - AluSx SINE Alu -15 297 1 754 167 0 0 chr17 27971201 27971321 -57467159 - AluSp/q SINE Alu -4 309 190 205 222 10 172 chr17 27971880 27971979 -57466501 + MIR SINE MIR 25 107 -101 370 103 52 0 chr17 27972228 27972286 -57466194 - L1MA1 LINE L1 -4 6298 6238 1563 161 30 39 chr17 27972605 27972910 -57465570 + AluSx SINE Alu 7 308 -4 1954 116 17 7 chr17 27973319 27973611 -57464869 + AluSq SINE Alu 1 295 -18 2375 93 0 3 chr17 27973614 27973926 -57464554 + AluY SINE Alu 1 311 0 1970 132 14 3 chr17 27974018 27974314 -57464166 - AluSq SINE Alu -14 299 1 2043 126 18 0 chr17 27974424 27974710 -57463770 + AluSx SINE Alu 1 291 -21 865 126 7 15 chr17 27974961 27975096 -57463384 - AluJo SINE Alu -178 134 1 1686 185 7 3 chr17 27975279 27975582 -57462898 + AluJb SINE Alu 1 304 -8 1856 129 0 4 chr17 27975661 27975924 -57462556 + AluSx SINE Alu 1 262 -50 918 97 0 8 chr17 27975924 27976048 -57462432 + AluY SINE Alu 10 132 -179 2231 90 0 47 chr17 27976055 27976376 -57462104 + AluY SINE Alu 3 308 -3 2290 85 0 52 chr17 27976421 27976749 -57461731 + AluY SINE Alu 1 311 0 358 232 20 50 chr17 27976782 27976881 -57461599 + MER46C DNA MER2_type 25 120 -218 1670 133 21 107 chr17 27977112 27977250 -57461230 + AluYb8 SINE Alu 1 149 -169 2138 91 17 10 chr17 27977250 27977546 -57460934 - AluY SINE Alu -13 298 1 1670 133 21 107 chr17 27977546 27977745 -57460735 + AluYb8 SINE Alu 149 309 -9 616 287 81 39 chr17 27978136 27978384 -57460096 - MER102a DNA MER1_type -1097 320 55 2184 102 0 26 chr17 27978384 27978687 -57459793 - AluSq SINE Alu -18 295 1 616 287 81 39 chr17 27978687 27978745 -57459735 - MER102a DNA MER1_type -1362 55 1 516 285 65 31 chr17 27978915 27979206 -57459274 + L2 LINE L2 2187 2487 -827 2119 92 7 4 chr17 27979483 27979798 -57458682 + AluSg SINE Alu 1 316 0 207 0 0 0 chr17 27979993 27980016 -57458464 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 1669 141 98 4 chr17 27980101 27980377 -57458103 + AluSx SINE Alu 1 302 -10 2313 113 0 0 chr17 27980383 27980693 -57457787 + AluSg SINE Alu 1 310 0 234 266 38 13 chr17 27980802 27980881 -57457599 - L1ME4a LINE L1 -52 6069 5989 274 305 102 53 chr17 27980976 27981158 -57457322 - L1ME4a LINE L1 -481 5640 5468 1875 157 3 13 chr17 27981158 27981463 -57457017 - AluSx SINE Alu -10 302 1 274 305 102 53 chr17 27981463 27981713 -57456767 - L1ME4a LINE L1 -653 5468 5290 706 179 232 21 chr17 27982552 27982742 -57455738 - MIR SINE MIR -3 259 30 2179 107 0 16 chr17 27982758 27983067 -57455413 + AluSg SINE Alu 1 304 -6 2136 113 3 10 chr17 27983654 27983955 -57454525 - AluSg SINE Alu -11 299 1 203 147 29 0 chr17 27984132 27984166 -57454314 + L2 LINE L2 3264 3298 -15 848 229 88 9 chr17 27984385 27984612 -57453868 - MIR SINE MIR 0 262 18 241 226 0 0 chr17 27984773 27984826 -57453654 - L1MC/D LINE L1 -1977 5831 5779 640 249 127 0 chr17 27984853 27985074 -57453406 - L1MC/D LINE L1 -2265 5543 5295 918 189 44 6 chr17 27985286 27985445 -57453035 - AluJo SINE Alu -1 301 137 2216 216 109 110 chr17 27985474 27985582 -57452898 + L1MC4 LINE L1 6761 6868 -1174 2318 89 7 0 chr17 27985582 27985886 -57452594 + AluSp SINE Alu 1 306 -7 2216 216 109 110 chr17 27985886 27986142 -57452338 + L1MC4 LINE L1 6868 7123 -919 857 194 0 0 chr17 27986142 27986271 -57452209 - AluJo SINE Alu -170 132 4 261 0 0 0 chr17 27986277 27986306 -57452174 + (TC)n Simple_repeat Simple_repeat 2 30 0 2216 216 109 110 chr17 27986306 27987193 -57451287 + L1MC4 LINE L1 7128 8021 -21 2571 59 7 0 chr17 27987193 27987498 -57450982 - AluSc SINE Alu 0 309 3 2216 216 109 110 chr17 27987498 27987517 -57450963 + L1MC4 LINE L1 8021 8039 -3 2133 103 7 0 chr17 27987819 27988134 -57450346 + AluSx SINE Alu 1 317 0 2319 93 0 3 chr17 27988416 27988717 -57449763 - AluSg SINE Alu -10 300 1 2047 120 3 7 chr17 27988753 27989052 -57449428 + AluY SINE Alu 6 303 -8 867 215 0 0 chr17 27989052 27989196 -57449284 - FRAM SINE Alu -32 144 1 671 260 242 11 chr17 27989227 27989504 -57448976 + L2 LINE L2 2973 3313 0 209 221 42 147 chr17 27990191 27990286 -57448194 + L2 LINE L2 3133 3217 -55 22 35 0 0 chr17 27990853 27990882 -57447598 + AT_rich Low_complexity Low_complexity 1 29 0 1920 84 28 4 chr17 27991819 27992068 -57446412 - AluY SINE Alu -55 256 2 1744 144 65 0 chr17 27992098 27992376 -57446104 - AluJb SINE Alu -16 296 1 28 0 0 0 chr17 27993190 27993218 -57445262 + AT_rich Low_complexity Low_complexity 1 28 0 822 204 0 54 chr17 27993414 27993581 -57444899 - FRAM SINE Alu -17 159 2 1707 170 10 14 chr17 27993606 27993894 -57444586 + AluJo SINE Alu 1 287 -25 382 287 0 43 chr17 27993923 27994026 -57444454 + L1MC4 LINE L1 6614 6713 -1329 1996 142 0 3 chr17 27994026 27994314 -57444166 - AluSx SINE Alu -25 287 1 382 287 0 43 chr17 27994314 27994325 -57444155 + L1MC4 LINE L1 6713 6723 -1319 777 176 15 8 chr17 27994350 27994481 -57443999 - FLAM_A SINE Alu -1 132 1 2169 107 13 19 chr17 27994586 27994895 -57443585 + AluSp SINE Alu 1 307 -6 1024 149 0 44 chr17 27995490 27995671 -57442809 - AluSg/x SINE Alu -6 306 134 1893 157 7 0 chr17 27995671 27995970 -57442510 - AluSx SINE Alu -11 301 1 832 200 40 34 chr17 27996234 27996409 -57442071 + AluSg/x SINE Alu 135 310 0 702 227 0 0 chr17 27996430 27996562 -57441918 - FLAM_A SINE Alu 0 133 2 1605 151 4 37 chr17 27996726 27996864 -57441616 + AluSx SINE Alu 6 132 -180 2238 91 0 23 chr17 27996864 27997173 -57441307 + AluSp SINE Alu 1 302 -11 1605 151 4 37 chr17 27997173 27997306 -57441174 + AluSx SINE Alu 132 268 -44 1578 134 87 32 chr17 27997784 27998061 -57440419 + AluJo SINE Alu 1 292 -20 1270 185 54 64 chr17 27998133 27998431 -57440049 - AluJo SINE Alu -17 295 1 1476 198 51 0 chr17 27998443 27998716 -57439764 - AluJo SINE Alu -23 289 3 404 111 0 16 chr17 27998721 27998784 -57439696 - AluSc SINE Alu -11 298 237 1269 80 6 6 chr17 27998786 27998949 -57439531 - AluY SINE Alu -148 163 1 2037 122 3 59 chr17 27999095 27999415 -57439065 - AluSg SINE Alu -8 302 1 1740 91 53 4 chr17 27999682 27999925 -57438555 + AluSg SINE Alu 1 255 -55 25 0 0 0 chr17 28001149 28001174 -57437306 + AT_rich Low_complexity Low_complexity 1 25 0 1213 117 0 0 chr17 28001321 28001483 -57436997 - AluSp SINE Alu -16 297 136 2220 103 3 0 chr17 28001614 28001905 -57436575 + AluSg SINE Alu 1 292 -18 2054 136 0 3 chr17 28001994 28002302 -57436178 + AluSc SINE Alu 1 307 -2 513 113 125 0 chr17 28002385 28002465 -57436015 + 5S rRNA rRNA 1 90 -31 2143 72 3 84 chr17 28002496 28002828 -57435652 + AluSg SINE Alu 1 305 -5 1981 90 13 57 chr17 28002860 28003160 -57435320 + AluY SINE Alu 1 287 -24 209 286 61 0 chr17 28003607 28003656 -57434824 + MIR SINE MIR 34 85 -177 1790 174 3 3 chr17 28003712 28004010 -57434470 - AluJb SINE Alu -14 298 1 939 144 0 0 chr17 28004033 28004165 -57434315 - FLAM_C SINE Alu -1 132 1 235 196 18 0 chr17 28004647 28004703 -57433777 + MER5C DNA MER1_type 261 317 -7 1973 125 27 0 chr17 28004754 28005051 -57433429 - AluSx SINE Alu -7 305 1 1948 128 7 10 chr17 28005092 28005388 -57433092 - AluSx SINE Alu -15 297 3 2012 117 27 7 chr17 28005442 28005742 -57432738 + AluSx SINE Alu 1 306 -6 2352 86 0 0 chr17 28005807 28006098 -57432382 + AluSg SINE Alu 1 291 -19 1264 111 0 0 chr17 28007277 28007448 -57431032 - AluSg/x SINE Alu -9 303 133 2210 119 3 0 chr17 28007449 28007752 -57430728 - AluSx SINE Alu -8 304 1 1206 126 0 0 chr17 28007848 28008022 -57430458 + AluSg/x SINE Alu 132 305 -5 426 206 122 38 chr17 28008059 28008190 -57430290 + HAL1 LINE L1 1499 1640 -867 871 147 7 0 chr17 28008192 28008328 -57430152 + FAM SINE Alu 36 172 -13 1546 202 128 73 chr17 28008328 28008763 -57429717 + HAL1 LINE L1 1633 2043 -464 2058 106 34 0 chr17 28008763 28009056 -57429424 + AluSq SINE Alu 1 303 -10 1546 202 128 73 chr17 28009056 28009096 -57429384 + HAL1 LINE L1 2043 2079 -428 2351 85 3 3 chr17 28009096 28009402 -57429078 - AluSp SINE Alu -6 307 2 1546 202 128 73 chr17 28009402 28009510 -57428970 + HAL1 LINE L1 2079 2249 -258 1854 132 30 0 chr17 28010765 28011061 -57427419 + AluSx SINE Alu 5 309 -3 459 256 86 69 chr17 28011098 28011308 -57427172 + MIR SINE MIR 47 253 -9 2147 98 3 14 chr17 28011911 28012207 -57426273 + AluSp SINE Alu 1 293 -20 1980 128 0 0 chr17 28012218 28012521 -57425959 + AluSc SINE Alu 1 303 0 2020 100 17 0 chr17 28012640 28012929 -57425551 - AluSq SINE Alu -19 294 1 793 253 94 26 chr17 28012933 28013316 -57425164 - L1MC4a LINE L1 -137 5984 5576 2237 90 0 0 chr17 28013631 28013930 -57424550 - AluSg SINE Alu -11 299 1 2446 70 3 0 chr17 28014048 28014360 -57424120 + AluSp SINE Alu 1 313 0 1514 127 0 0 chr17 28015364 28015592 -57422888 + AluSg/x SINE Alu 82 309 -1 1788 137 38 0 chr17 28015618 28015911 -57422569 + AluSx SINE Alu 9 312 0 2170 84 7 3 chr17 28016002 28016300 -57422180 + AluSq SINE Alu 1 299 -14 2156 83 35 0 chr17 28016300 28016588 -57421892 + AluY SINE Alu 1 298 -13 3072 222 73 47 chr17 28016596 28017008 -57421472 - L2 LINE L2 -103 3210 2810 2048 103 20 0 chr17 28017008 28017300 -57421180 - AluSp SINE Alu -15 298 1 3072 222 73 47 chr17 28017300 28017850 -57420630 - L2 LINE L2 -503 2810 2215 1120 137 13 97 chr17 28017850 28017938 -57420542 - MER3 DNA MER1_type -2 207 113 2192 99 0 16 chr17 28017938 28018241 -57420239 + AluSx SINE Alu 1 298 -14 1120 137 13 97 chr17 28018241 28018378 -57420102 - MER3 DNA MER1_type -96 113 1 3072 222 73 47 chr17 28018378 28018466 -57420014 - L2 LINE L2 -1098 2215 2131 25 0 0 0 chr17 28018537 28018562 -57419918 + AT_rich Low_complexity Low_complexity 1 25 0 259 327 82 9 chr17 28018579 28018689 -57419791 - L2 LINE L2 -289 2983 2866 258 56 0 0 chr17 28018710 28018746 -57419734 + (CA)n Simple_repeat Simple_repeat 2 37 0 21 0 0 0 chr17 28020283 28020304 -57418176 + AT_rich Low_complexity Low_complexity 1 21 0 1800 130 0 46 chr17 28020517 28020824 -57417656 - AluSx SINE Alu -19 293 1 388 164 17 2 chr17 28020898 28020983 -57417497 - AluS SINE Alu 0 300 228 198 168 50 178 chr17 28021008 28021062 -57417418 + MIR SINE MIR 160 197 -65 2272 102 0 0 chr17 28021062 28021367 -57417113 + AluSq SINE Alu 1 305 -8 198 168 50 178 chr17 28021367 28021413 -57417067 + MIR SINE MIR 197 247 -15 813 128 0 23 chr17 28021435 28021568 -57416912 - AluSg SINE Alu -179 131 2 851 135 0 0 chr17 28021633 28021759 -57416721 - AluSg/x SINE Alu -16 296 171 1593 127 32 0 chr17 28021759 28022011 -57416469 - AluSx SINE Alu -15 297 38 2269 78 0 3 chr17 28022022 28022316 -57416164 - AluSg SINE Alu -17 293 1 1816 94 29 14 chr17 28022352 28022660 -57415820 + AluSg SINE Alu 1 312 0 2321 81 0 0 chr17 28022686 28022982 -57415498 + AluSq SINE Alu 1 296 -17 604 197 23 38 chr17 28023008 28023140 -57415340 + AluJo/FLAM SINE Alu 2 131 -171 1176 159 0 27 chr17 28023141 28023361 -57415119 + AluJo SINE Alu 84 297 -15 729 94 125 23 chr17 28023364 28023492 -57414988 + AluSg/x SINE Alu 130 270 -40 963 105 7 13 chr17 28023492 28023644 -57414836 - AluSq/x SINE Alu -161 151 1 180 0 0 0 chr17 28023669 28023689 -57414791 + (CAAAA)n Simple_repeat Simple_repeat 4 23 0 1898 129 0 0 chr17 28023732 28024043 -57414437 + AluSc SINE Alu 1 311 0 358 250 86 26 chr17 28024158 28024274 -57414206 - L2 LINE L2 -2 3311 3189 1970 71 60 7 chr17 28024907 28025196 -57413284 - AluSq SINE Alu 0 303 1 270 241 72 60 chr17 28026225 28026308 -57412172 + L2 LINE L2 3208 3291 -22 21 0 0 0 chr17 28026681 28026702 -57411778 + AT_rich Low_complexity Low_complexity 1 21 0 2220 69 31 0 chr17 28026742 28027032 -57411448 + AluSg SINE Alu 1 299 -11 2161 103 0 0 chr17 28027178 28027468 -57411012 - AluSc SINE Alu -19 290 1 1499 162 63 36 chr17 28027705 28028007 -57410473 - AluSg SINE Alu 0 310 1 1204 161 186 16 chr17 28028028 28028276 -57410204 - AluJb SINE Alu -12 290 1 1678 152 30 17 chr17 28028280 28028577 -57409903 - AluSx SINE Alu -11 301 1 183 80 0 0 chr17 28028605 28028630 -57409850 + (ATTG)n Simple_repeat Simple_repeat 4 28 0 637 93 0 56 chr17 28028634 28028741 -57409739 - AluSg/x SINE Alu -36 276 176 2080 81 42 0 chr17 28028792 28029077 -57409403 - AluSq SINE Alu -16 297 1 328 296 266 39 chr17 28029238 28029584 -57408896 + L3 LINE CR1 366 632 -945 2207 88 7 7 chr17 28029584 28029889 -57408591 + AluSq SINE Alu 1 305 -8 328 296 266 39 chr17 28029889 28030035 -57408445 + L3 LINE CR1 632 970 -607 1522 152 35 21 chr17 28030039 28030329 -57408151 - AluJo SINE Alu -18 294 1 1601 132 21 0 chr17 28030445 28030688 -57407792 + AluJb SINE Alu 49 296 -16 287 210 90 18 chr17 28030704 28030946 -57407534 + L1M4 LINE L1 5175 5429 -806 2155 114 0 0 chr17 28030956 28031255 -57407225 + AluSx SINE Alu 1 299 -13 244 286 0 0 chr17 28032234 28032297 -57406183 - MARNA DNA Mariner -102 484 422 1819 163 0 0 chr17 28032491 28032785 -57405695 - AluSx SINE Alu -1 311 18 2011 115 7 16 chr17 28033033 28033337 -57405143 - AluSx SINE Alu -11 301 1 1920 129 0 29 chr17 28033337 28033510 -57404970 - AluSx SINE Alu -11 301 139 1500 116 68 8 chr17 28033510 28033760 -57404720 - AluSq SINE Alu -10 303 39 1920 129 0 29 chr17 28033760 28033896 -57404584 - AluSx SINE Alu -173 139 1 191 235 0 0 chr17 28034692 28034726 -57403754 - L2 LINE L2 -30 3283 3250 2215 81 0 7 chr17 28034750 28035046 -57403434 - AluSg SINE Alu -16 294 1 1963 137 0 7 chr17 28035776 28036076 -57402404 - AluSx SINE Alu -7 305 8 1905 136 0 7 chr17 28036159 28036453 -57402027 - AluSx SINE Alu -20 292 1 1493 167 60 4 chr17 28036491 28036772 -57401708 + AluJb SINE Alu 1 297 -15 2429 53 7 7 chr17 28036989 28037291 -57401189 + AluY SINE Alu 1 302 -9 898 113 0 15 chr17 28037571 28037704 -57400776 - AluSq SINE Alu -102 211 81 2135 86 7 3 chr17 28037706 28037997 -57400483 - AluY SINE Alu -19 292 1 1793 132 50 0 chr17 28038079 28038360 -57400120 - AluSx SINE Alu -17 295 1 2165 110 3 0 chr17 28038799 28039107 -57399373 - AluSq SINE Alu -4 309 1 1461 187 14 21 chr17 28039137 28039426 -57399054 + AluJo SINE Alu 3 289 -23 783 83 9 0 chr17 28039639 28039748 -57398732 - AluSg/x SINE Alu -5 305 196 21 0 0 0 chr17 28040009 28040030 -57398450 + AT_rich Low_complexity Low_complexity 1 21 0 2084 103 0 3 chr17 28040113 28040405 -57398075 - AluSq SINE Alu -22 291 1 305 252 104 17 chr17 28040531 28040646 -57397834 - MIR3 SINE MIR -11 197 73 2038 121 0 0 chr17 28040989 28041278 -57397202 - AluSg SINE Alu -20 290 2 623 88 239 2 chr17 28041327 28041342 -57397138 - L1PB1 LINE L1 -7 6144 6134 2011 93 57 0 chr17 28041342 28041621 -57396859 + AluSx SINE Alu 1 295 -17 623 88 239 2 chr17 28041621 28041727 -57396753 - L1PB1 LINE L1 -17 6134 6011 1566 183 29 0 chr17 28041731 28042010 -57396470 - AluJb SINE Alu -20 292 6 2153 102 7 0 chr17 28042489 28042784 -57395696 + AluSx SINE Alu 1 297 -15 1517 187 28 3 chr17 28042817 28043101 -57395379 + AluJb SINE Alu 1 291 -21 2210 97 3 0 chr17 28043172 28043470 -57395010 + AluSp SINE Alu 1 299 -14 844 174 0 14 chr17 28043591 28043735 -57394745 - FLAM_C SINE Alu -1 142 1 1255 157 5 14 chr17 28043785 28044001 -57394479 + AluJb SINE Alu 87 300 -12 2092 106 3 7 chr17 28044166 28044459 -57394021 + AluSc SINE Alu 1 292 -17 2101 97 0 0 chr17 28044464 28044742 -57393738 + AluSq SINE Alu 9 286 -27 228 35 0 0 chr17 28044742 28044771 -57393709 + (CA)n Simple_repeat Simple_repeat 2 30 0 1390 142 95 15 chr17 28044809 28045083 -57393397 + AluJb SINE Alu 1 296 -16 1835 151 10 19 chr17 28045215 28045527 -57392953 + AluSx SINE Alu 1 309 -3 1948 116 17 7 chr17 28045602 28045895 -57392585 - AluSx SINE Alu -16 296 1 1912 126 0 29 chr17 28046345 28046655 -57391825 - AluSx SINE Alu -9 303 3 2192 114 0 0 chr17 28046656 28046963 -57391517 - AluSx SINE Alu -5 307 1 1578 160 0 7 chr17 28047106 28047375 -57391105 - AluJb SINE Alu -21 291 25 1948 133 0 0 chr17 28047392 28047671 -57390809 - AluSx SINE Alu -25 287 9 2084 120 3 0 chr17 28048802 28049101 -57389379 - AluSx SINE Alu -12 300 1 936 133 0 0 chr17 28049102 28049237 -57389243 - AluSq/x SINE Alu -178 135 1 254 204 272 29 chr17 28049330 28049433 -57389047 + L2 LINE L2 3179 3306 -7 228 349 27 23 chr17 28049469 28049730 -57388750 - L1ME LINE L1 -369 5752 5491 1984 141 0 13 chr17 28049744 28050057 -57388423 - AluSx SINE Alu -3 309 1 2290 93 3 0 chr17 28050113 28050424 -57388056 - AluSp SINE Alu -1 312 1 2121 102 6 13 chr17 28050451 28050764 -57387716 + AluSq SINE Alu 2 312 -1 2104 118 7 3 chr17 28050939 28051244 -57387236 - AluSc SINE Alu -3 306 1 2090 113 3 3 chr17 28051837 28052137 -57386343 - AluSx SINE Alu -12 300 1 1937 141 3 0 chr17 28052226 28052517 -57385963 - AluSx SINE Alu -15 297 6 376 71 18 0 chr17 28052942 28052998 -57385482 - L1MA4A LINE L1 -11 6292 6236 2029 120 3 13 chr17 28053518 28053818 -57384662 - AluSx SINE Alu -15 297 1 198 118 0 0 chr17 28053833 28053867 -57384613 + (T)n Simple_repeat Simple_repeat 1 34 0 1215 148 20 0 chr17 28053872 28054068 -57384412 - AluSx SINE Alu -112 200 1 1549 199 0 26 chr17 28054095 28054401 -57384079 - AluJo SINE Alu -14 298 1 2110 104 0 3 chr17 28054577 28054875 -57383605 - AluSx SINE Alu -15 297 1 1786 160 7 0 chr17 28054881 28055174 -57383306 - AluSx SINE Alu -16 296 2 685 241 0 7 chr17 28055175 28055320 -57383160 - AluJo SINE Alu -167 145 2 1260 239 0 17 chr17 28055363 28055495 -57382985 + AluJo SINE Alu 1 134 -178 2416 59 0 10 chr17 28055495 28055799 -57382681 + AluY SINE Alu 1 301 -10 1260 239 0 17 chr17 28055799 28055963 -57382517 + AluJo SINE Alu 134 292 -20 2385 77 0 6 chr17 28055966 28056277 -57382203 + AluY SINE Alu 3 311 0 1191 256 89 20 chr17 28056280 28056783 -57381697 + L1ME3A LINE L1 5289 5826 -344 * 4615 148 25 10 chr17 28056335 28057124 -57381356 + L1PA16 LINE L1 5366 6166 0 1071 165 0 0 chr17 28057138 28057302 -57381178 + FRAM SINE Alu 1 164 -2 1561 169 10 41 chr17 28057308 28057622 -57380858 + AluJo SINE Alu 1 304 -8 2043 117 10 0 chr17 28057664 28057955 -57380525 - AluSx SINE Alu -18 294 1 373 209 28 34 chr17 28057972 28058075 -57380405 - L1M4 LINE L1 -407 5714 5624 1882 164 0 3 chr17 28058158 28058469 -57380011 + AluJo SINE Alu 3 312 0 2209 99 0 3 chr17 28058808 28059111 -57379369 - AluSc SINE Alu -7 302 1 2085 114 0 0 chr17 28059263 28059560 -57378920 - AluSx SINE Alu -14 298 2 360 256 105 63 chr17 28059584 28059822 -57378658 + MIR SINE MIR 1 248 -14 2107 84 6 26 chr17 28059873 28060051 -57378429 - AluSg SINE Alu -4 306 135 2024 90 45 17 chr17 28060051 28060340 -57378140 - AluSg SINE Alu -13 297 1 2107 84 6 26 chr17 28060340 28060472 -57378008 - AluSg SINE Alu -175 135 2 1951 69 0 0 chr17 28060480 28060727 -57377753 - AluY SINE Alu -10 301 55 256 209 30 45 chr17 28060873 28060940 -57377540 - MIR SINE MIR -122 140 75 2009 108 21 0 chr17 28061474 28061753 -57376727 + AluSq SINE Alu 1 308 0 208 0 0 0 chr17 28061753 28061776 -57376704 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1024 203 4 30 chr17 28061927 28062164 -57376316 + AluJo SINE Alu 70 300 -12 2099 121 0 7 chr17 28062377 28062684 -57375796 - AluSx SINE Alu -7 305 1 1806 172 7 0 chr17 28062791 28063094 -57375386 + AluJb SINE Alu 6 310 -2 25 0 0 0 chr17 28063583 28063608 -57374872 + AT_rich Low_complexity Low_complexity 1 25 0 665 185 0 0 chr17 28063612 28063720 -57374760 - FLAM_A SINE Alu -27 115 8 2217 94 0 10 chr17 28063913 28064221 -57374259 + AluSq SINE Alu 1 305 -8 654 244 183 45 chr17 28064361 28064481 -57373999 - L1ME4a LINE L1 -240 5881 5779 1921 113 10 14 chr17 28064481 28064773 -57373707 - AluSg SINE Alu -19 291 1 654 244 183 45 chr17 28064773 28065095 -57373385 - L1ME4a LINE L1 -342 5779 5378 1589 158 17 34 chr17 28065157 28065455 -57373025 - AluJo SINE Alu -19 293 1 830 139 36 7 chr17 28065541 28065678 -57372802 - AluSg/x SINE Alu -18 294 154 2110 107 10 7 chr17 28065927 28066237 -57372243 - AluSx SINE Alu -1 311 1 613 193 171 59 chr17 28066498 28066685 -57371795 - MER3 DNA MER1_type -1 208 1 33 56 0 0 chr17 28067378 28067432 -57371048 + GC_rich Low_complexity Low_complexity 1 54 0 23 101 0 0 chr17 28067598 28067677 -57370803 + GC_rich Low_complexity Low_complexity 1 79 0 30 27 0 0 chr17 28067742 28067779 -57370701 + GC_rich Low_complexity Low_complexity 1 37 0 24 32 0 0 chr17 28067856 28067887 -57370593 + GC_rich Low_complexity Low_complexity 1 31 0 225 274 145 16 chr17 28068265 28068389 -57370091 + L2 LINE L2 3172 3311 -2 395 289 29 0 chr17 28069029 28069133 -57369347 - MIR SINE MIR -60 148 42 911 215 220 35 chr17 28069338 28069877 -57368603 - LTR50 LTR ERVL -57 738 1 780 158 201 34 chr17 28070234 28070443 -57368037 - Tigger7 DNA MER2_type 0 2587 2344 1952 113 14 0 chr17 28070443 28070727 -57367753 - AluSx SINE Alu -20 292 5 283 95 0 48 chr17 28070727 28070769 -57367711 - Alu SINE Alu -262 40 1 2129 108 7 0 chr17 28070777 28071073 -57367407 - AluSq SINE Alu -15 298 1 2281 87 0 13 chr17 28071075 28071250 -57367230 - AluSx SINE Alu -4 308 137 1948 82 43 7 chr17 28071250 28071557 -57366923 - AluY SINE Alu 0 311 1 2281 87 0 13 chr17 28071557 28071693 -57366787 - AluSx SINE Alu -175 137 1 413 170 107 204 chr17 28071701 28071779 -57366701 - MIR SINE MIR -71 191 107 3096 156 20 38 chr17 28071779 28072363 -57366117 - L1MB5 LINE L1 -1 6173 5600 413 170 107 204 chr17 28072363 28072403 -57366077 - MIR SINE MIR -155 107 65 1733 148 54 7 chr17 28072403 28072700 -57365780 - AluJb SINE Alu -1 311 1 413 170 107 204 chr17 28072700 28072786 -57365694 - MIR SINE MIR -197 65 6 2298 82 0 7 chr17 28073109 28073413 -57365067 + AluSg1 SINE Alu 3 304 -5 213 39 0 0 chr17 28074423 28074449 -57364031 + (TTCC)n Simple_repeat Simple_repeat 1 26 0 1886 144 7 3 chr17 28074934 28075239 -57363241 - AluSx SINE Alu -6 306 1 2133 90 23 13 chr17 28075596 28075906 -57362574 + AluSp SINE Alu 1 313 0 263 209 79 106 chr17 28075914 28075960 -57362520 - MIR SINE MIR -62 146 100 2376 88 0 0 chr17 28075960 28076266 -57362214 + AluSx SINE Alu 1 306 -6 263 209 79 106 chr17 28076266 28076347 -57362133 - MIR SINE MIR -108 100 16 2217 85 0 0 chr17 28077088 28077382 -57361098 - AluY SINE Alu -17 294 1 2151 114 0 0 chr17 28077383 28077682 -57360798 - AluSq SINE Alu -14 299 1 1091 47 13 27 chr17 28078008 28078157 -57360323 - L1PB1 LINE L1 -2 6149 6003 2300 87 0 10 chr17 28078184 28078495 -57359985 - AluSx SINE Alu -4 308 1 268 376 81 13 chr17 28078559 28078708 -57359772 + L2 LINE L2 3097 3255 -17 2190 91 0 7 chr17 28078888 28079186 -57359294 - AluSg1 SINE Alu -13 296 1 1849 138 0 39 chr17 28079361 28079672 -57358808 + AluJb SINE Alu 1 299 -13 359 224 237 83 chr17 28079918 28080018 -57358462 - L3 LINE CR1 -111 1466 1383 2084 119 0 0 chr17 28080018 28080320 -57358160 + AluSx SINE Alu 1 302 -10 359 224 237 83 chr17 28080320 28080447 -57358033 - L3 LINE CR1 -194 1383 1204 * 448 315 94 33 chr17 28080434 28080796 -57357684 - L2 LINE L2 -998 2316 1933 2159 108 0 22 chr17 28081654 28081969 -57356511 + AluSx SINE Alu 1 308 -4 2167 89 7 7 chr17 28082406 28082709 -57355771 - AluSx SINE Alu -9 303 1 967 118 0 0 chr17 28082709 28082844 -57355636 - AluSq/x SINE Alu -178 135 1 335 229 100 8 chr17 28084444 28084562 -57353918 - MIR SINE MIR -63 145 32 379 306 103 55 chr17 28084671 28084904 -57353576 - L2 LINE L2 -1 3271 3010 2299 86 0 0 chr17 28084904 28085205 -57353275 - AluSx SINE Alu -6 306 6 379 306 103 55 chr17 28085205 28085369 -57353111 - L2 LINE L2 -262 3010 2855 665 314 42 24 chr17 28085393 28085730 -57352750 - L2 LINE L2 -568 2746 2404 2118 94 3 24 chr17 28085754 28086052 -57352428 - AluSg SINE Alu -16 294 3 1401 234 142 16 chr17 28086448 28086712 -57351768 - MLT1D LTR MaLR 0 505 275 2310 94 0 0 chr17 28086712 28087019 -57351461 - AluSg SINE Alu -3 307 1 1401 234 142 16 chr17 28087019 28087185 -57351295 - MLT1D LTR MaLR -230 275 21 2555 101 27 5 chr17 28087188 28087555 -57350925 - THE1C LTR MaLR 0 375 1 413 250 81 15 chr17 28087582 28087718 -57350762 + MLT1L LTR MaLR 422 566 -49 360 255 0 43 chr17 28088264 28088358 -57350122 - L1MC4 LINE L1 -1339 6703 6614 * 363 277 12 0 chr17 28088287 28088370 -57350110 + L1MC4 LINE L1 6620 6703 -1339 218 325 119 1 chr17 28088508 28088626 -57349854 + MIR SINE MIR 23 153 -61 880 284 101 3 chr17 28088636 28088992 -57349488 + L2 LINE L2 1418 1808 -1506 414 275 58 47 chr17 28088993 28089164 -57349316 - L1ME3A LINE L1 -58 6112 5940 2193 146 5 61 chr17 28089173 28089523 -57348957 - L1MB5 LINE L1 -14 6160 5837 1854 125 19 29 chr17 28089523 28089836 -57348644 - AluSx SINE Alu -2 310 1 2193 146 5 61 chr17 28089836 28089911 -57348569 - L1MB5 LINE L1 -337 5837 5759 835 156 0 0 chr17 28089911 28090039 -57348441 - AluJb SINE Alu -182 130 3 253 88 0 0 chr17 28090043 28090077 -57348403 + L1MA4A LINE L1 6116 6149 -154 1437 138 22 0 chr17 28090105 28090336 -57348144 + AluJb SINE Alu 67 302 -10 512 202 10 0 chr17 28090337 28090441 -57348039 - L1MA4A LINE L1 -182 6121 6017 * 1354 229 45 64 chr17 28090438 28090787 -57347693 - L1ME3A LINE L1 -286 5884 5530 2242 96 0 0 chr17 28090787 28091080 -57347400 + AluSg SINE Alu 1 293 -17 2178 114 0 0 chr17 28091087 28091385 -57347095 + AluSx SINE Alu 1 298 -14 1354 229 45 64 chr17 28091385 28091450 -57347030 - L1ME3A LINE L1 -646 5524 5470 233 333 0 14 chr17 28091479 28091548 -57346932 + L2 LINE L2 1829 1896 -1418 457 183 30 17 chr17 28091551 28091667 -57346813 - L1MC3 LINE L1 -306 7689 7364 1639 159 3 20 chr17 28091731 28092033 -57346447 - AluSx SINE Alu -14 298 2 1835 238 80 124 chr17 28092078 28092362 -57346118 + L2 LINE L2 1989 2284 -1029 1620 184 7 16 chr17 28092362 28092667 -57345813 - AluJb SINE Alu -10 302 1 1835 238 80 124 chr17 28092667 28092728 -57345752 + L2 LINE L2 2284 2346 -967 2069 99 3 14 chr17 28092728 28093052 -57345428 + AluSg SINE Alu 1 310 0 1835 238 80 124 chr17 28093052 28093083 -57345397 + L2 LINE L2 2346 2377 -936 1769 113 4 22 chr17 28093083 28093252 -57345228 - AluSp SINE Alu -13 300 136 2181 84 0 23 chr17 28093252 28093561 -57344919 - AluY SINE Alu -9 302 1 1769 113 4 22 chr17 28093561 28093666 -57344814 - AluSp SINE Alu -177 136 31 3981 119 49 62 chr17 28093667 28094001 -57344479 + LTR12 LTR ERV1 2 339 -349 2008 93 0 11 chr17 28094001 28094281 -57344199 + AluY SINE Alu 23 299 -12 3981 119 49 62 chr17 28094281 28094642 -57343838 + LTR12 LTR ERV1 339 688 0 1835 238 80 124 chr17 28094642 28095010 -57343470 + L2 LINE L2 2377 2714 -599 230 125 50 0 chr17 28095010 28095050 -57343430 - L1ME LINE L1 -606 5564 5523 1835 238 80 124 chr17 28095050 28095347 -57343133 + L2 LINE L2 2714 3023 -290 365 259 141 83 chr17 28095385 28095853 -57342627 - L1MEd LINE L1 -5623 496 2 341 247 70 12 chr17 28095904 28096050 -57342430 + MIR SINE MIR 28 147 -61 2115 119 7 0 chr17 28096457 28096767 -57341713 - AluSx SINE Alu 0 312 1 294 182 61 0 chr17 28096814 28096913 -57341567 + (TA)n Simple_repeat Simple_repeat 1 105 0 45 93 0 6 chr17 28096913 28097046 -57341434 + AT_rich Low_complexity Low_complexity 1 134 -26 1983 138 0 0 chr17 28097046 28097336 -57341144 + AluSx SINE Alu 1 290 -22 45 93 0 6 chr17 28097336 28097363 -57341117 + AT_rich Low_complexity Low_complexity 134 160 0 591 137 11 0 chr17 28097397 28097492 -57340988 + L1MB3 LINE L1 6076 6171 -12 1808 155 28 0 chr17 28097515 28097805 -57340675 + AluJo SINE Alu 1 298 -14 1304 177 49 4 chr17 28097822 28098087 -57340393 - L1MC3 LINE L1 -44 7741 7465 2134 116 0 0 chr17 28098124 28098426 -57340054 + AluSx SINE Alu 1 302 -10 1237 154 99 4 chr17 28098429 28098682 -57339798 - L1MB3 LINE L1 -13 6170 5894 470 168 53 26 chr17 28098675 28098788 -57339692 - L1MC3 LINE L1 -305 7480 7365 * 494 240 143 10 chr17 28098806 28099007 -57339473 - MIR SINE MIR -26 236 7 1677 157 45 0 chr17 28099156 28099442 -57339038 - AluJb SINE Alu -13 299 1 899 253 120 29 chr17 28099807 28100182 -57338298 - L1ME3 LINE L1 -276 5886 5478 754 164 0 16 chr17 28100776 28100904 -57337576 - FLAM_C SINE Alu -16 127 2 492 294 130 17 chr17 28100999 28101230 -57337250 + MIR SINE MIR 6 262 0 349 254 296 18 chr17 28101243 28101412 -57337068 + MIR SINE MIR 47 262 0 447 287 168 22 chr17 28101537 28101805 -57336675 - L1ME4a LINE L1 -12 6109 5803 574 236 20 14 chr17 28101820 28101968 -57336512 - L1ME4a LINE L1 -425 5696 5548 29 47 0 0 chr17 28102248 28102291 -57336189 + AT_rich Low_complexity Low_complexity 1 43 0 1354 154 5 0 chr17 28102314 28102535 -57335945 + AluJb SINE Alu 87 308 -4 2157 116 0 0 chr17 28102640 28102941 -57335539 - AluSx SINE Alu -11 301 1 609 262 122 66 chr17 28103285 28103781 -57334699 - L1MC4a LINE L1 -232 5889 5387 2096 90 0 48 chr17 28103781 28103925 -57334555 + AluSg SINE Alu 1 124 -186 1812 102 13 70 chr17 28103925 28104239 -57334241 + AluY SINE Alu 2 297 -14 2096 90 0 48 chr17 28104239 28104404 -57334076 + AluSg SINE Alu 124 295 -15 609 262 122 66 chr17 28104404 28104468 -57334012 - L1MC4a LINE L1 -734 5387 5328 453 282 100 70 chr17 28104455 28104612 -57333868 - L1ME4a LINE L1 -294 5827 5676 * 1884 104 4 8 chr17 28104612 28104880 -57333600 - AluSx SINE Alu -2 310 44 1964 129 7 3 chr17 28104886 28105181 -57333299 - AluSx SINE Alu -16 296 1 453 282 100 70 chr17 28105181 28105346 -57333134 - L1ME4a LINE L1 -449 5672 5488 297 279 62 90 chr17 28105886 28106084 -57332396 + MLT1K LTR MaLR 153 344 -244 2027 116 0 20 chr17 28106084 28106386 -57332094 - AluJb SINE Alu -16 296 1 297 279 62 90 chr17 28106386 28106431 -57332049 + MLT1K LTR MaLR 344 389 -199 190 274 67 74 chr17 28106714 28106849 -57331631 - L2 LINE L2 -634 2680 2547 1593 168 63 58 chr17 28106902 28107284 -57331196 - MLT1B LTR MaLR 0 390 7 2063 119 3 0 chr17 28107459 28107754 -57330726 - AluSx SINE Alu -16 296 1 281 160 20 0 chr17 28107795 28107845 -57330635 - MER66B LTR ERV1 -141 345 295 2044 135 0 0 chr17 28107909 28108212 -57330268 - AluSx SINE Alu -9 303 1 1781 162 13 3 chr17 28108514 28108816 -57329664 + AluJo SINE Alu 1 305 -7 373 249 75 17 chr17 28108816 28108989 -57329491 - Zaphod DNA AcHobo -172 3859 3677 1975 141 3 0 chr17 28108999 28109298 -57329182 - AluSq SINE Alu -13 300 1 520 263 133 26 chr17 28109353 28109466 -57329014 - L1M4 LINE L1 -1636 4510 4410 599 230 32 0 chr17 28109466 28109592 -57328888 - FLAM_A SINE Alu 0 133 4 520 263 133 26 chr17 28109592 28109908 -57328572 - L1M4 LINE L1 -1736 4410 4035 1659 143 15 80 chr17 28110099 28110228 -57328252 - L1ME LINE L1 -574 5592 5456 2124 99 3 7 chr17 28110228 28110522 -57327958 - AluSg1 SINE Alu -16 293 1 1659 143 15 80 chr17 28110522 28110686 -57327794 - L1ME LINE L1 -710 5456 5336 2346 80 0 0 chr17 28110686 28110986 -57327494 - AluY SINE Alu -11 300 1 1659 143 15 80 chr17 28110986 28111105 -57327375 - L1ME LINE L1 -830 5336 5211 560 225 54 0 chr17 28111245 28111403 -57327077 + MLT1J2 LTR MaLR 253 417 -29 1951 120 0 7 chr17 28111433 28111717 -57326763 + AluSx SINE Alu 1 315 0 298 0 0 0 chr17 28111717 28111750 -57326730 + (TAAA)n Simple_repeat Simple_repeat 1 104 0 1910 139 0 7 chr17 28111936 28112237 -57326243 - AluJb SINE Alu -9 303 5 2104 121 0 0 chr17 28112272 28112579 -57325901 - AluSx SINE Alu -5 307 1 305 329 90 7 chr17 28112708 28112863 -57325617 - MIR SINE MIR -12 250 83 21 0 0 0 chr17 28113457 28113478 -57325002 + AT_rich Low_complexity Low_complexity 1 21 0 2186 127 48 25 chr17 28113491 28113670 -57324810 - THE1B LTR MaLR 0 364 191 2184 110 0 0 chr17 28113670 28113969 -57324511 - AluSx SINE Alu -13 299 1 2186 127 48 25 chr17 28113969 28114143 -57324337 - THE1B LTR MaLR -173 191 3 22 35 0 0 chr17 28114150 28114179 -57324301 + AT_rich Low_complexity Low_complexity 1 29 0 1533 150 0 81 chr17 28114275 28114606 -57323874 + AluJb SINE Alu 1 306 0 21 0 0 0 chr17 28114624 28114645 -57323835 + AT_rich Low_complexity Low_complexity 1 21 0 2827 163 16 51 chr17 28114645 28114695 -57323785 - L1MB3 LINE L1 -9 6174 6124 2033 119 0 10 chr17 28114695 28114989 -57323491 - AluSx SINE Alu -21 291 1 2827 163 16 51 chr17 28114989 28115000 -57323480 - L1MB3 LINE L1 -59 6124 6114 2106 85 3 0 chr17 28115000 28115282 -57323198 - AluSc SINE Alu -18 291 9 2827 163 16 51 chr17 28115282 28115790 -57322690 - L1MB3 LINE L1 -69 6114 5624 246 279 0 0 chr17 28115832 28115900 -57322580 - MARNA DNA Mariner -198 388 321 281 294 32 48 chr17 28115985 28116111 -57322369 - MIR SINE MIR -124 138 15 27 0 0 0 chr17 28116194 28116221 -57322259 + AT_rich Low_complexity Low_complexity 1 27 0 2290 81 7 0 chr17 28116345 28116641 -57321839 + AluSq SINE Alu 1 298 -15 298 310 50 0 chr17 28116791 28116891 -57321589 + LTR16A LTR ERVL 10 114 -336 694 135 19 0 chr17 28116907 28117011 -57321469 - FLAM_C SINE Alu -12 131 26 1802 145 30 3 chr17 28117011 28117148 -57321332 + AluSx SINE Alu 1 133 -179 1945 94 0 57 chr17 28117148 28117445 -57321035 + AluSx SINE Alu 1 280 -32 1802 145 30 3 chr17 28117445 28117611 -57320869 + AluSx SINE Alu 133 312 0 257 132 53 0 chr17 28117629 28117667 -57320813 - Alu SINE Alu -260 40 1 270 322 11 11 chr17 28117711 28117798 -57320682 + LTR16B LTR ERVL 131 217 -247 371 319 21 27 chr17 28117838 28118026 -57320454 + LTR16B LTR ERVL 278 464 0 2349 74 0 0 chr17 28118258 28118580 -57319900 + AluY SINE Alu 1 311 0 2084 97 0 0 chr17 28118949 28119267 -57319213 + AluSx SINE Alu 6 323 0 1663 165 17 7 chr17 28119269 28119566 -57318914 + AluJo SINE Alu 3 302 -10 792 151 0 0 chr17 28119628 28119747 -57318733 - MER1A DNA MER1_type 0 533 415 2098 98 0 33 chr17 28119747 28120053 -57318427 - AluSg SINE Alu -14 296 1 1908 133 4 14 chr17 28120058 28120336 -57318144 - MER1A DNA MER1_type -199 330 56 1641 162 0 72 chr17 28120491 28120825 -57317655 - AluJo SINE Alu -2 310 1 2284 76 0 0 chr17 28121204 28121506 -57316974 + AluY SINE Alu 1 302 -9 32 26 0 0 chr17 28121721 28121760 -57316720 + AT_rich Low_complexity Low_complexity 1 39 0 2008 108 3 7 chr17 28121760 28122047 -57316433 - AluSp SINE Alu -25 288 3 1827 122 0 48 chr17 28123095 28123260 -57315220 - AluJb SINE Alu -15 297 152 1893 102 39 39 chr17 28123260 28123565 -57314915 - AluY SINE Alu -6 305 1 1827 122 0 48 chr17 28123565 28123711 -57314769 - AluJb SINE Alu -160 152 1 848 102 8 16 chr17 28123713 28123840 -57314640 - AluJb SINE Alu -186 126 1 282 130 304 0 chr17 28123842 28123911 -57314569 - L1MB3 LINE L1 -43 6140 6051 330 244 33 11 chr17 28123979 28124069 -57314411 + LTR67 LTR ERVL 98 189 -368 204 311 170 0 chr17 28124954 28125060 -57313420 - L2 LINE L2 -5 3308 3185 1880 139 4 4 chr17 28126051 28126356 -57312124 - AluJo SINE Alu 0 305 1 2540 145 5 0 chr17 28126393 28126779 -57311701 + MLT1B LTR MaLR 1 388 -2 1649 100 100 33 chr17 28126854 28127125 -57311355 - AluSg SINE Alu -21 289 1 1253 204 84 0 chr17 28127409 28127708 -57310772 + MER33 DNA MER1_type 1 324 0 2126 100 0 19 chr17 28127902 28128212 -57310268 - AluSx SINE Alu -8 304 1 2018 121 0 29 chr17 28128836 28128977 -57309503 + AluSx SINE Alu 1 145 -167 2411 77 0 0 chr17 28128977 28129288 -57309192 + AluSp SINE Alu 1 311 -2 2018 121 0 29 chr17 28129288 28129460 -57309020 + AluSx SINE Alu 145 305 -7 187 285 35 130 chr17 28129559 28129990 -57308490 + L2 LINE L2 2842 3231 -41 285 98 0 0 chr17 28130556 28130597 -57307883 + (TTTA)n Simple_repeat Simple_repeat 4 44 0 1855 129 4 0 chr17 28130598 28130876 -57307604 - AluSx SINE Alu -33 279 1 287 292 67 33 chr17 28130953 28131073 -57307407 - MER5A DNA MER1_type -30 159 36 216 322 56 35 chr17 28130955 28131098 -57307382 + MER5A DNA MER1_type 44 189 0 * 2254 94 0 7 chr17 28131150 28131457 -57307023 + AluSp SINE Alu 1 305 -8 1743 181 0 10 chr17 28131466 28131775 -57306705 + AluJb SINE Alu 2 307 -5 914 179 0 0 chr17 28131812 28131963 -57306517 + FRAM SINE Alu 10 160 -16 285 284 336 8 chr17 28132066 28132200 -57306280 - MER5B DNA MER1_type 0 178 1 505 203 16 128 chr17 28132291 28132478 -57306002 + MER5B DNA MER1_type 1 166 -12 216 0 0 0 chr17 28132580 28132604 -57305876 + (T)n Simple_repeat Simple_repeat 1 24 0 4202 13 2 0 chr17 28132616 28133089 -57305391 - L1PA2 LINE L1 0 6155 5682 261 308 15 0 chr17 28133535 28133600 -57304880 - L2 LINE L2 -1 3312 3247 262 227 76 0 chr17 28133690 28133756 -57304724 - L2 LINE L2 -222 3050 2980 704 188 100 6 chr17 28133777 28133937 -57304543 + MER5B DNA MER1_type 1 175 -3 180 0 0 0 chr17 28133975 28133995 -57304485 + (CA)n Simple_repeat Simple_repeat 1 20 0 546 291 183 27 chr17 28134159 28134786 -57303694 - L2 LINE L2 -8 3264 2538 870 250 31 25 chr17 28134794 28135116 -57303364 - L1MEc LINE L1 -6002 394 5 2005 137 3 3 chr17 28135122 28135429 -57303051 + AluSx SINE Alu 1 307 -5 232 167 67 25 chr17 28135814 28135833 -57302647 - L1MC5 LINE L1 -252 7709 7692 1502 195 13 10 chr17 28135833 28136140 -57302340 + AluJo SINE Alu 1 308 -4 232 167 67 25 chr17 28136140 28136240 -57302240 - L1MC5 LINE L1 -269 7692 7585 814 128 143 0 chr17 28137042 28137198 -57301282 - AluSg/x SINE Alu 0 308 134 1632 160 24 3 chr17 28137198 28137513 -57300967 - AluSx SINE Alu 0 312 1 313 206 134 10 chr17 28137649 28137746 -57300734 - MIR SINE MIR -70 192 84 189 340 0 0 chr17 28138545 28138592 -57299888 - L2 LINE L2 0 3313 3267 234 162 0 0 chr17 28138722 28138759 -57299721 + MER91 DNA MER1_type 104 140 0 319 216 52 164 chr17 28139047 28139260 -57299220 - MIR SINE MIR -22 240 52 665 271 104 14 chr17 28139270 28139491 -57298989 + MIR SINE MIR 19 259 -3 477 0 0 0 chr17 28139491 28139544 -57298936 + (CAT)n Simple_repeat Simple_repeat 2 54 0 32 0 0 0 chr17 28140203 28140235 -57298245 + AT_rich Low_complexity Low_complexity 1 32 0 37995 53 6 2 chr17 28140248 28145803 -57292677 - L1PA4 LINE L1 -3 6467 893 576 161 0 0 chr17 28145770 28145857 -57292623 - L1PA4 LINE L1 -6365 96 10 * 310 333 51 17 chr17 28145947 28146064 -57292416 - MLT2E LTR ERVL -469 159 39 589 224 82 0 chr17 28146835 28146969 -57291511 - MER45A DNA AcHobo -2 176 32 1990 180 100 27 chr17 28146969 28147418 -57291062 - MLT1D LTR MaLR -23 482 1 263 103 0 0 chr17 28147656 28147695 -57290785 + MER53 DNA DNA 2 40 -149 570 232 28 50 chr17 28148402 28148583 -57289897 - MER104 DNA MER2_type -3 177 1 276 154 0 0 chr17 28148585 28148637 -57289843 + CT-rich Low_complexity Low_complexity 1 52 0 2041 118 20 0 chr17 28148637 28148942 -57289538 - AluSx SINE Alu 0 312 2 1736 139 3 21 chr17 28148992 28149310 -57289170 - AluJb SINE Alu 0 313 1 430 68 123 0 chr17 28149580 28149653 -57288827 - L1MB4 LINE L1 -4 6176 6095 546 206 135 0 chr17 28149782 28149908 -57288572 - MLT2B1 LTR ERVL -377 143 1 249 147 0 0 chr17 28150713 28150747 -57287733 - Alu SINE Alu -268 34 1 303 230 75 31 chr17 28150750 28151417 -57287063 + L1MD3 LINE L1 6765 7401 -640 249 83 0 0 chr17 28151417 28151453 -57287027 + (TTTTG)n Simple_repeat Simple_repeat 4 39 0 303 230 75 31 chr17 28151453 28152000 -57286480 + L1MD3 LINE L1 7401 8026 -15 1944 122 4 0 chr17 28152000 28152305 -57286175 - AluSg SINE Alu 0 306 1 303 230 75 31 chr17 28152305 28152321 -57286159 + L1MD3 LINE L1 8026 8040 -1 * 847 254 126 47 chr17 28152317 28152751 -57285729 - L1ME4a LINE L1 -71 6050 5550 2069 107 7 0 chr17 28152751 28153042 -57285438 - AluSx SINE Alu -19 293 1 847 254 126 47 chr17 28153042 28153219 -57285261 - L1ME4a LINE L1 -571 5550 5388 2052 131 0 0 chr17 28153749 28154046 -57284434 + AluSx SINE Alu 1 297 -15 226 237 93 25 chr17 28154048 28154166 -57284314 - L1ME4a LINE L1 -73 6048 5923 1745 99 0 0 chr17 28154427 28154660 -57283820 + AluSx SINE Alu 1 233 -79 5083 52 0 133 chr17 28154660 28155454 -57283026 - LTR12 LTR ERV1 0 688 1 55645 86 6 12 chr17 28155454 28163926 -57274554 - HERV9 LTR ERV1 0 8399 1 6590 72 5 2 chr17 28163926 28164750 -57273730 - LTR12 LTR ERV1 0 826 1 508 130 0 0 chr17 28164750 28164827 -57273653 + AluSx SINE Alu 228 304 -6 1726 148 7 38 chr17 28165030 28165368 -57273112 - AluJb SINE Alu 0 330 2 2139 126 3 0 chr17 28165550 28165843 -57272637 - AluSg SINE Alu -16 294 1 978 173 46 115 chr17 28166191 28166514 -57271966 + AluJo SINE Alu 2 302 0 497 278 162 32 chr17 28167469 28167685 -57270795 - MIR SINE MIR -6 256 13 261 0 0 0 chr17 28167707 28167736 -57270744 + (CA)n Simple_repeat Simple_repeat 1 29 0 181 308 0 0 chr17 28168065 28168104 -57270376 + L3 LINE CR1 1430 1468 -109 860 241 61 110 chr17 28168113 28168641 -57269839 + MER20B DNA MER1_type 3 504 -279 370 149 81 0 chr17 28168732 28168806 -57269674 - MER116 DNA Mariner 0 80 1 270 212 88 77 chr17 28168903 28169034 -57269446 + MER20B DNA MER1_type 606 741 -42 1829 157 3 32 chr17 28169034 28169346 -57269134 + AluSx SINE Alu 4 306 -6 270 212 88 77 chr17 28169346 28169384 -57269096 + MER20B DNA MER1_type 741 777 -6 408 230 68 68 chr17 28169580 28169665 -57268815 - MIR SINE MIR -63 199 112 2371 143 25 3 chr17 28169665 28170022 -57268458 - MLT1A1 LTR MaLR 0 365 1 408 230 68 68 chr17 28170022 28170084 -57268396 - MIR SINE MIR -149 113 52 734 214 21 16 chr17 28170108 28170295 -57268185 - MER53 DNA DNA 0 189 2 2108 133 0 20 chr17 28170332 28170633 -57267847 - AluSx SINE Alu -17 295 1 2082 155 0 0 chr17 28170633 28170942 -57267538 - AluJb SINE Alu -3 309 1 2323 110 3 3 chr17 28170951 28171261 -57267219 - AluSx SINE Alu -2 310 1 258 250 138 0 chr17 28171360 28171476 -57267004 + MIR3 SINE MIR 42 173 -35 480 239 0 52 chr17 28171479 28171613 -57266867 - L2 LINE L2 -15 3298 3172 1979 163 0 0 chr17 28171680 28171974 -57266506 - AluJb SINE Alu -18 294 1 266 233 346 15 chr17 28172052 28172185 -57266295 - MER69A DNA AcHobo 0 177 1 289 316 1 0 chr17 28172221 28172318 -57266162 - MIR SINE MIR -63 145 62 1925 142 25 4 chr17 28172402 28172683 -57265797 - AluSx SINE Alu -25 287 1 237 256 73 0 chr17 28172710 28172792 -57265688 + MIR SINE MIR 65 152 -110 411 145 0 0 chr17 28173299 28173368 -57265112 + (TA)n Simple_repeat Simple_repeat 2 70 0 868 160 91 5 chr17 28173395 28173582 -57264898 - MIR SINE MIR -32 230 28 280 227 142 39 chr17 28173608 28173743 -57264737 - MIR SINE MIR -59 149 10 394 258 223 6 chr17 28174175 28174354 -57264126 + MIR SINE MIR 37 252 -10 300 81 0 108 chr17 28174413 28174487 -57263993 - L1MB3 LINE L1 0 6183 6118 1677 139 82 11 chr17 28174492 28174759 -57263721 + AluJo SINE Alu 1 286 -26 1560 163 50 0 chr17 28174766 28175043 -57263437 - L1MB3 LINE L1 -21 6162 5872 320 270 126 0 chr17 28175347 28175458 -57263022 + MIR SINE MIR 60 184 -78 1651 170 0 44 chr17 28175665 28175959 -57262521 - AluJo SINE Alu -31 281 1 249 57 0 0 chr17 28176265 28176300 -57262180 + (TG)n Simple_repeat Simple_repeat 2 36 0 2183 116 7 0 chr17 28176300 28176592 -57261888 - AluSx SINE Alu -18 294 1 502 210 172 6 chr17 28176732 28176889 -57261591 - MER5A DNA MER1_type -3 186 4 239 286 29 9 chr17 28177128 28177233 -57261247 - L1ME4a LINE L1 -9 6112 6006 953 207 62 0 chr17 28177616 28177824 -57260656 - MER58A DNA MER1_type 0 224 4 372 183 56 0 chr17 28177847 28177918 -57260562 - MER58B DNA MER1_type -3 338 264 337 253 0 23 chr17 28177930 28178017 -57260463 + CT-rich Low_complexity Low_complexity 1 85 0 744 82 0 0 chr17 28178018 28178115 -57260365 - AluSg/x SINE Alu -5 304 208 571 241 97 7 chr17 28178263 28178408 -57260072 - MER58C DNA MER1_type -43 172 15 248 303 0 15 chr17 28178592 28178658 -57259822 - L3 LINE CR1 -1 1576 1512 693 199 0 0 chr17 28179005 28179238 -57259242 + (CA)n Simple_repeat Simple_repeat 1 233 0 261 0 0 0 chr17 28179495 28179524 -57258956 + (TTTAA)n Simple_repeat Simple_repeat 3 31 0 654 175 18 0 chr17 28179526 28179640 -57258840 - FLAM_C SINE Alu -17 116 1 292 227 56 82 chr17 28179640 28179789 -57258691 - L1ME3A LINE L1 -47 6115 5961 2042 145 0 0 chr17 28179820 28180117 -57258363 + AluSq SINE Alu 1 297 -16 1330 150 0 10 chr17 28180117 28180317 -57258163 - AluSq SINE Alu -114 199 2 415 277 225 54 chr17 28180464 28181020 -57257460 + L1MC4a LINE L1 5284 5934 -1874 1873 178 3 0 chr17 28181207 28181516 -57256964 + AluJb SINE Alu 1 310 -2 210 118 0 0 chr17 28182432 28182466 -57256014 + (TAAAA)n Simple_repeat Simple_repeat 5 38 0 785 218 102 0 chr17 28182830 28183055 -57255425 - MIR SINE MIR -2 260 13 2315 95 0 10 chr17 28183112 28183416 -57255064 + AluSp SINE Alu 1 301 -12 2332 83 3 13 chr17 28184046 28184358 -57254122 - AluY SINE Alu -2 309 1 1771 189 48 3 chr17 28184383 28184716 -57253764 - MER7A DNA MER2_type 0 346 1 3664 170 83 38 chr17 28184936 28185747 -57252733 - L1MC3 LINE L1 0 7785 6939 793 264 6 6 chr17 28185957 28186135 -57252345 + MER8 DNA MER2_type 2 179 -60 395 188 0 0 chr17 28186110 28186174 -57252306 + MER2 DNA MER2_type 282 345 0 * 218 204 0 0 chr17 28186870 28186919 -57251561 + A-rich Low_complexity Low_complexity 1 49 0 2131 119 10 3 chr17 28187425 28187720 -57250760 + AluSx SINE Alu 2 298 -14 237 306 0 28 chr17 28187733 28187805 -57250675 - MIR SINE MIR -191 71 2 215 268 143 36 chr17 28187811 28187923 -57250557 - MIR SINE MIR -76 132 8 2175 131 7 0 chr17 28189471 28189777 -57248703 + AluSx SINE Alu 1 308 -4 755 153 153 13 chr17 28189795 28189945 -57248535 + AluSq SINE Alu 137 307 -6 22 35 0 0 chr17 28190754 28190783 -57247697 + AT_rich Low_complexity Low_complexity 1 29 0 419 284 0 17 chr17 28191562 28191678 -57246802 + L3 LINE CR1 1444 1557 -20 204 336 107 33 chr17 28192181 28192303 -57246177 + L2 LINE L2 3137 3267 -5 2171 126 7 3 chr17 28192895 28193205 -57245275 - AluSq SINE Alu -2 311 1 1215 173 31 9 chr17 28194372 28194598 -57243882 - AluJo SINE Alu -7 305 75 348 254 0 0 chr17 28194710 28194777 -57243703 - AluJo SINE Alu -235 67 1 1745 97 4 0 chr17 28195029 28195255 -57243225 + AluSp SINE Alu 1 227 -86 2402 97 7 0 chr17 28195364 28195674 -57242806 - AluSx SINE Alu 0 312 1 1162 118 56 130 chr17 28195674 28195944 -57242536 + LTR26E LTR ERV1 250 499 -123 22 35 0 0 chr17 28195944 28195973 -57242507 + AT_rich Low_complexity Low_complexity 1 29 0 2129 128 7 0 chr17 28195973 28196269 -57242211 - AluSx SINE Alu -10 302 5 797 187 0 0 chr17 28196274 28196408 -57242072 + LTR26B LTR ERV1 398 531 0 1814 171 0 13 chr17 28196433 28196732 -57241748 + AluJb SINE Alu 1 295 -17 2290 104 3 0 chr17 28196738 28197047 -57241433 + AluSq SINE Alu 1 310 -3 22 0 0 0 chr17 28197076 28197098 -57241382 + AT_rich Low_complexity Low_complexity 1 22 0 2274 100 10 0 chr17 28197170 28197459 -57241021 + AluSg SINE Alu 1 292 -18 1582 139 24 98 chr17 28197512 28197922 -57240558 + MER58D DNA MER1_type 1 380 -6 2186 127 0 3 chr17 28198529 28198843 -57239637 + AluSq SINE Alu 1 313 0 2230 94 10 3 chr17 28199014 28199311 -57239169 + AluSq SINE Alu 1 299 -14 2121 116 0 0 chr17 28199316 28199608 -57238872 + AluY SINE Alu 1 292 -19 2202 122 3 0 chr17 28199608 28199912 -57238568 + AluSq SINE Alu 1 305 -8 849 93 54 0 chr17 28199939 28200068 -57238412 + AluY SINE Alu 176 311 0 2202 121 10 0 chr17 28200136 28200434 -57238046 - AluSx SINE Alu -11 301 1 2245 90 7 13 chr17 28201339 28201640 -57236840 + AluSp SINE Alu 1 299 -14 795 161 0 0 chr17 28201747 28201877 -57236603 - FLAM_A SINE Alu 0 133 4 190 250 0 0 chr17 28203067 28203115 -57235365 + MIR SINE MIR 97 144 -118 183 80 0 0 chr17 28203813 28203838 -57234642 + (CCG)n Simple_repeat Simple_repeat 1 25 0 194 91 30 0 chr17 28205461 28205494 -57232986 + A-rich Low_complexity Low_complexity 5 38 0 798 213 102 0 chr17 28205858 28206083 -57232397 - MIR SINE MIR -2 260 13 2435 86 0 3 chr17 28206140 28206442 -57232038 + AluSp SINE Alu 1 301 -12 198 0 0 0 chr17 28208700 28208722 -57229758 + (GGGTG)n Simple_repeat Simple_repeat 3 24 0 2040 116 27 0 chr17 28209415 28209707 -57228773 + AluSq SINE Alu 1 300 -13 22 35 0 0 chr17 28209845 28209874 -57228606 + AT_rich Low_complexity Low_complexity 1 29 0 1440 151 68 127 chr17 28210066 28210334 -57228146 - MER7A DNA MER2_type -2692 346 106 2054 145 0 0 chr17 28210334 28210637 -57227843 + AluSx SINE Alu 3 305 -7 1440 151 68 127 chr17 28210637 28210738 -57227742 - MER7A DNA MER2_type -2932 106 1 1649 111 157 0 chr17 28211211 28211473 -57227007 - AluSp SINE Alu 0 303 1 1655 168 44 0 chr17 28211739 28212036 -57226444 - AluJo SINE Alu -2 310 1 275 271 215 0 chr17 28212697 28212804 -57225676 + MER5A DNA MER1_type 54 183 -6 198 323 152 37 chr17 28212823 28212987 -57225493 - MER5A DNA MER1_type -6 183 1 1994 165 21 52 chr17 28214368 28214471 -57224009 + L1ME1 LINE L1 5721 5826 -508 909 215 169 33 chr17 28214471 28214773 -57223707 + MER2 DNA MER2_type 2 344 0 1994 165 21 52 chr17 28214773 28214833 -57223647 + L1ME1 LINE L1 5826 5886 -448 1975 136 35 0 chr17 28214833 28215120 -57223360 + AluSx SINE Alu 1 297 -15 1994 165 21 52 chr17 28215120 28215426 -57223054 + L1ME1 LINE L1 5886 6334 0 200 205 26 51 chr17 28216396 28216474 -57222006 + A-rich Low_complexity Low_complexity 2 77 0 2192 115 0 7 chr17 28216601 28216906 -57221574 - AluSx SINE Alu -9 303 1 439 357 87 5 chr17 28217067 28217252 -57221228 + L2 LINE L2 3073 3272 0 804 239 75 10 chr17 28217446 28217647 -57220833 - MIR SINE MIR 0 262 49 426 190 25 16 chr17 28217705 28217826 -57220654 + CT-rich Low_complexity Low_complexity 3 124 0 809 129 9 0 chr17 28217848 28217964 -57220516 + AluSq/x SINE Alu 1 117 -196 2090 112 0 0 chr17 28217967 28218244 -57220236 - AluSx SINE Alu -35 277 1 676 84 0 21 chr17 28218784 28218879 -57219601 + AluS SINE Alu 1 93 -219 1674 111 58 0 chr17 28218884 28219127 -57219353 - AluSq SINE Alu -56 257 1 977 125 13 13 chr17 28219249 28219401 -57219079 - AluSx SINE Alu -159 153 2 189 300 0 33 chr17 28219494 28219554 -57218926 + MIR SINE MIR 93 150 -58 1063 203 33 0 chr17 28219991 28220203 -57218277 - MER20 DNA MER1_type 0 219 1 565 258 23 0 chr17 28221192 28221320 -57217160 + MER5A DNA MER1_type 37 167 -22 190 316 88 35 chr17 28221710 28221824 -57216656 + L2 LINE L2 3194 3313 0 2175 98 11 0 chr17 28221828 28222150 -57216330 + AluY SINE Alu 1 325 0 665 228 88 6 chr17 28222814 28222985 -57215495 - MER58C DNA MER1_type -16 199 15 292 305 0 48 chr17 28223167 28223272 -57215208 - MIR3 SINE MIR -3 205 106 570 228 0 0 chr17 28223544 28223794 -57214686 + (CA)n Simple_repeat Simple_repeat 1 250 0 261 0 0 0 chr17 28224056 28224085 -57214395 + (TTTAA)n Simple_repeat Simple_repeat 3 31 0 625 193 18 0 chr17 28224087 28224201 -57214279 - FLAM_C SINE Alu -17 116 1 229 240 21 83 chr17 28224252 28224348 -57214132 - L1ME3A LINE L1 -118 6052 5963 1296 136 0 0 chr17 28224381 28224558 -57213922 + AluSq SINE Alu 1 177 -136 726 225 0 0 chr17 28224755 28224928 -57213552 + AluSg/x SINE Alu 129 301 -11 190 270 95 108 chr17 28224928 28225024 -57213456 + L2 LINE L2 3123 3219 -53 2028 93 3 93 chr17 28225024 28225199 -57213281 - AluSq SINE Alu -21 292 158 2449 73 0 13 chr17 28225199 28225514 -57212966 - AluY SINE Alu 0 311 1 2028 93 3 93 chr17 28225514 28225659 -57212821 - AluSq SINE Alu -155 158 1 190 270 95 108 chr17 28225659 28225672 -57212808 + L2 LINE L2 3219 3231 -41 1861 135 11 14 chr17 28225672 28225981 -57212499 - AluJb SINE Alu 0 309 2 190 270 95 108 chr17 28225981 28226017 -57212463 + L2 LINE L2 3231 3268 -4 1920 153 7 16 chr17 28226213 28226521 -57211959 + AluJb SINE Alu 1 305 -7 23 78 0 0 chr17 28226662 28226713 -57211767 + AT_rich Low_complexity Low_complexity 1 51 0 929 75 8 0 chr17 28227730 28227850 -57210630 - AluY SINE Alu -12 299 179 227 309 69 6 chr17 28227856 28228031 -57210449 - L1ME3A LINE L1 -237 5884 5699 1727 171 0 54 chr17 28228264 28228580 -57209900 + AluJo SINE Alu 1 299 -13 231 296 68 11 chr17 28229470 28229646 -57208834 - L1ME LINE L1 -237 5884 5699 2063 119 0 0 chr17 28229689 28229997 -57208483 - AluSc SINE Alu 0 308 1 22 0 0 0 chr17 28230534 28230556 -57207924 + AT_rich Low_complexity Low_complexity 1 22 0 263 257 27 14 chr17 28230902 28230976 -57207504 + MIR SINE MIR 178 252 -10 1791 150 80 0 chr17 28231054 28231341 -57207139 - AluJb SINE Alu -2 310 1 648 145 61 46 chr17 28231875 28232006 -57206474 - FLAM_A SINE Alu 0 133 1 2303 78 37 0 chr17 28232057 28232352 -57206128 + AluSp SINE Alu 1 306 -7 32 43 0 0 chr17 28232392 28232438 -57206042 + AT_rich Low_complexity Low_complexity 1 46 0 2172 100 20 13 chr17 28232494 28232794 -57205686 + AluSx SINE Alu 1 302 -10 2423 30 123 15 chr17 28232826 28233160 -57205320 - L1PA8 LINE L1 0 6172 5803 21 0 0 0 chr17 28233164 28233185 -57205295 + AT_rich Low_complexity Low_complexity 1 21 0 378 96 0 0 chr17 28233314 28233366 -57205114 + MER66A LTR ERV1 287 338 -140 585 103 196 0 chr17 28233445 28233542 -57204938 + AluSp SINE Alu 1 116 -197 * 652 111 0 0 chr17 28233539 28233629 -57204851 - AluJ/FLAM SINE Alu -218 94 5 349 355 57 0 chr17 28233796 28233920 -57204560 + MIR SINE MIR 20 150 -112 1221 156 0 0 chr17 28233980 28234160 -57204320 - AluSq SINE Alu 0 313 134 2431 74 0 6 chr17 28234229 28234540 -57203940 - AluY SINE Alu -2 309 1 265 337 30 46 chr17 28234884 28235054 -57203426 - MER5B DNA MER1_type -2 187 6 288 331 7 0 chr17 28235239 28235384 -57203096 + L1MC/D LINE L1 5661 5806 -2002 32 43 0 0 chr17 28235384 28235430 -57203050 + AT_rich Low_complexity Low_complexity 1 46 0 21 0 0 0 chr17 28236496 28236517 -57201963 + AT_rich Low_complexity Low_complexity 1 21 0 488 220 75 29 chr17 28240030 28240203 -57198277 - MARNA DNA Mariner -346 240 60 2402 284 131 38 chr17 28240317 28241519 -57196961 - L3 LINE CR1 -12 1565 253 788 244 127 65 chr17 28241959 28242266 -57196214 - MER102a DNA MER1_type -2 328 3 2077 117 43 0 chr17 28242682 28242981 -57195499 - AluSx SINE Alu 0 312 1 30 59 0 0 chr17 28243809 28243860 -57194620 + AT_rich Low_complexity Low_complexity 1 51 0 2073 61 0 0 chr17 28245262 28245508 -57192972 + AluSc SINE Alu 1 246 -63 323 198 10 10 chr17 28245772 28245868 -57192612 + AluSc SINE Alu 204 299 0 2088 117 3 23 chr17 28245925 28246255 -57192225 - AluSx SINE Alu 0 312 1 1733 165 0 57 chr17 28246299 28246615 -57191865 + AluJb SINE Alu 1 298 -14 1664 195 3 22 chr17 28246618 28246936 -57191544 + AluJo SINE Alu 1 312 0 574 184 10 0 chr17 28247416 28247519 -57190961 - FLAM_C SINE Alu -39 104 1 333 302 47 40 chr17 28248068 28248190 -57190290 + L1ME LINE L1 5617 5742 -379 1706 168 62 7 chr17 28248190 28248481 -57189999 + AluJo SINE Alu 1 307 -5 333 302 47 40 chr17 28248481 28248507 -57189973 + L1ME LINE L1 5742 5766 -355 1887 107 111 4 chr17 28248645 28248916 -57189564 + AluSx SINE Alu 1 300 -12 2236 121 0 19 chr17 28249178 28249492 -57188988 + AluSc SINE Alu 1 308 -1 679 190 0 0 chr17 28249931 28250052 -57188428 + FLAM_C SINE Alu 21 141 -2 2302 110 3 0 chr17 28251496 28251806 -57186674 - AluSx SINE Alu -1 311 1 22 0 0 0 chr17 28252676 28252698 -57185782 + AT_rich Low_complexity Low_complexity 1 22 0 2243 102 3 10 chr17 28253928 28254233 -57184247 + AluSq SINE Alu 1 303 -10 991 158 18 6 chr17 28254502 28254666 -57183814 - FRAM SINE Alu -10 166 1 1563 188 10 30 chr17 28255095 28255399 -57183081 - AluJb SINE Alu -14 298 1 1547 86 131 57 chr17 28255592 28255837 -57182643 - AluSx SINE Alu -13 299 37 24 0 0 0 chr17 28255844 28255868 -57182612 + AT_rich Low_complexity Low_complexity 1 24 0 2027 127 6 52 chr17 28256639 28256963 -57181517 + AluSx SINE Alu 1 309 -3 27 29 0 0 chr17 28257289 28257323 -57181157 + AT_rich Low_complexity Low_complexity 1 34 0 839 130 158 0 chr17 28257783 28257929 -57180551 - AluSg/x SINE Alu -17 293 125 2346 73 3 13 chr17 28258153 28258453 -57180027 - AluSq SINE Alu -16 297 1 1088 164 138 36 chr17 28258534 28258759 -57179721 - MER58B DNA MER1_type -2088 332 73 2189 97 17 0 chr17 28258759 28259047 -57179433 + AluSx SINE Alu 1 293 -19 1088 164 138 36 chr17 28259047 28259096 -57179384 - MER58B DNA MER1_type -2347 73 30 470 246 26 113 chr17 28259597 28259695 -57178785 - MIR3 SINE MIR -15 193 119 1952 92 19 0 chr17 28259695 28259955 -57178525 + AluY SINE Alu 1 265 -46 470 246 26 113 chr17 28259955 28260051 -57178429 - MIR3 SINE MIR -89 119 16 2521 80 0 3 chr17 28260685 28260999 -57177481 - AluSq SINE Alu 0 313 1 418 113 99 230 chr17 28261026 28261239 -57177241 + MER5A DNA MER1_type 5 189 0 198 298 206 7 chr17 28261466 28261607 -57176873 + L2 LINE L2 2849 3017 -255 293 216 250 7 chr17 28261608 28261756 -57176724 - HAL1 LINE L1 -1870 637 454 2334 92 0 0 chr17 28261975 28262268 -57176212 - AluSc SINE Alu -16 293 1 252 288 217 6 chr17 28262416 28262559 -57175921 + MIR SINE MIR 13 179 -29 2265 126 19 40 chr17 28262770 28263143 -57175337 - MLT1A1 LTR MaLR 0 365 1 421 313 49 6 chr17 28263197 28263360 -57175120 + L2 LINE L2 2040 2209 -1105 1721 176 7 3 chr17 28263354 28263660 -57174820 - AluJb SINE Alu -5 307 1 2403 156 19 89 chr17 28263728 28264292 -57174188 - L1MB5 LINE L1 -224 5950 5426 1487 170 45 131 chr17 28264286 28264500 -57173980 - L1MC4a LINE L1 -659 7149 6918 * 2493 71 0 0 chr17 28264500 28264810 -57173670 - AluSg SINE Alu 0 310 1 1487 170 45 131 chr17 28264810 28265129 -57173351 - L1MC4a LINE L1 -890 6918 6662 228 274 48 0 chr17 28265129 28265213 -57173267 + L2 LINE L2 2193 2280 -1034 2282 109 0 3 chr17 28265237 28265549 -57172931 - AluSx SINE Alu -1 311 1 387 287 218 33 chr17 28265654 28265914 -57172566 + L2 LINE L2 2511 2722 -592 2306 67 0 0 chr17 28265914 28266232 -57172248 - AluY SINE Alu 0 318 1 387 287 218 33 chr17 28266232 28266364 -57172116 + L2 LINE L2 2722 2977 -337 2109 114 7 0 chr17 28266477 28266775 -57171705 + AluSx SINE Alu 1 300 -12 965 152 9 0 chr17 28266821 28267078 -57171402 + CT-rich Low_complexity Low_complexity 2 434 0 436 280 0 77 chr17 28267111 28267153 -57171327 + L2 LINE L2 3141 3185 -87 2289 97 6 0 chr17 28267153 28267464 -57171016 + AluSp SINE Alu 1 313 0 436 280 0 77 chr17 28267464 28267564 -57170916 + L2 LINE L2 3185 3272 0 2264 81 3 10 chr17 28268102 28268411 -57170069 + AluSx SINE Alu 1 307 -5 1231 229 7 3 chr17 28271115 28271403 -57167077 + AluJb SINE Alu 1 289 -23 328 18 62 62 chr17 28271410 28271523 -57166957 + (TA)n Simple_repeat Simple_repeat 2 114 0 2554 186 103 6 chr17 28271525 28272037 -57166443 - MLT1F1 LTR MaLR 0 567 6 334 274 15 37 chr17 28272047 28272182 -57166298 + L1MC4a LINE L1 5804 5935 -1873 2225 84 0 7 chr17 28272186 28272482 -57165998 + AluY SINE Alu 1 294 -17 23 0 0 0 chr17 28272482 28272505 -57165975 + AT_rich Low_complexity Low_complexity 1 23 0 23 78 0 0 chr17 28272654 28272705 -57165775 + AT_rich Low_complexity Low_complexity 1 51 0 1481 197 25 7 chr17 28272745 28273029 -57165451 - AluJo SINE Alu -17 295 7 319 164 209 0 chr17 28273067 28273134 -57165346 + AluJ/FRAM SINE Alu 222 302 0 536 282 267 6 chr17 28273284 28273502 -57164978 + L2 LINE L2 1415 1575 -1739 180 0 0 0 chr17 28273502 28273522 -57164958 + (CAAA)n Simple_repeat Simple_repeat 3 22 0 536 282 267 6 chr17 28273522 28273629 -57164851 + L2 LINE L2 1575 1825 -1489 2394 144 25 58 chr17 28273634 28274057 -57164423 - L1MB7 LINE L1 -21 6163 5757 1824 114 66 0 chr17 28274057 28274328 -57164152 + AluSx SINE Alu 7 295 -17 2394 144 25 58 chr17 28274328 28274390 -57164090 - L1MB7 LINE L1 -427 5757 5694 1363 152 6 132 chr17 28274510 28274680 -57163800 - AluJb SINE Alu -13 299 109 204 40 0 0 chr17 28274680 28274705 -57163775 + (TTTC)n Simple_repeat Simple_repeat 3 27 0 2153 82 0 11 chr17 28274707 28274986 -57163494 - AluSp SINE Alu -37 276 1 1363 152 6 132 chr17 28274986 28275154 -57163326 - AluJb SINE Alu -204 108 1 995 223 5 9 chr17 28275156 28275380 -57163100 - L1M4 LINE L1 -1905 4241 4019 1096 147 36 49 chr17 28275381 28275549 -57162931 - AluJb SINE Alu -5 307 141 2238 119 0 0 chr17 28275549 28275860 -57162620 - AluSx SINE Alu -1 311 1 1096 147 36 49 chr17 28275860 28275916 -57162564 - AluJb SINE Alu -171 141 86 1566 176 24 83 chr17 28275916 28276242 -57162238 - L1M4 LINE L1 -2120 4026 3682 2633 29 0 0 chr17 28276242 28276551 -57161929 - AluY SINE Alu -2 309 1 1566 176 24 83 chr17 28276551 28276602 -57161878 - L1M4 LINE L1 -2464 3682 3630 2297 84 0 0 chr17 28276602 28276899 -57161581 - AluY SINE Alu -14 297 1 1566 176 24 83 chr17 28276899 28277013 -57161467 - L1M4 LINE L1 -2516 3630 3563 2298 248 27 77 chr17 28277016 28277911 -57160569 + L2 LINE L2 1839 2688 -626 708 219 11 22 chr17 28277915 28278025 -57160455 - L1M4 LINE L1 -2187 3959 3850 1202 183 43 108 chr17 28278025 28278348 -57160132 - AluJb SINE Alu -10 302 1 708 219 11 22 chr17 28278348 28278415 -57160065 - L1M4 LINE L1 -2296 3850 3784 2336 96 3 3 chr17 28278626 28278939 -57159541 + AluSp SINE Alu 1 313 0 451 272 122 22 chr17 28278959 28279139 -57159341 - MIR SINE MIR -43 219 22 1634 150 24 14 chr17 28279729 28280023 -57158457 - AluJo SINE Alu -15 297 1 646 197 94 98 chr17 28280219 28280446 -57158034 - L1MC5 LINE L1 -36 7925 7699 180 0 0 0 chr17 28280446 28280466 -57158014 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 646 197 94 98 chr17 28280466 28280502 -57157978 - L1MC5 LINE L1 -262 7699 7664 1560 181 10 20 chr17 28280502 28280794 -57157686 + AluJb SINE Alu 1 289 -23 646 197 94 98 chr17 28280794 28281173 -57157307 - L1MC5 LINE L1 -297 7664 7190 2003 130 0 0 chr17 28281602 28281909 -57156571 - AluSq SINE Alu -1 312 6 1720 175 0 14 chr17 28281943 28282240 -57156240 - AluJo SINE Alu -2 310 18 2165 124 0 0 chr17 28282340 28282646 -57155834 - AluSx SINE Alu -6 306 1 343 256 189 30 chr17 28282795 28282959 -57155521 - MIR SINE MIR -6 256 67 1846 150 17 7 chr17 28283405 28283698 -57154782 + AluSx SINE Alu 1 296 -16 2396 41 0 14 chr17 28283854 28284148 -57154332 - AluY SINE Alu -21 290 1 358 322 142 19 chr17 28285471 28285738 -57152742 + L2 LINE L2 2919 3218 -54 526 299 51 0 chr17 28285784 28285961 -57152519 - MIR3 SINE MIR -1 207 22 2244 77 3 55 chr17 28285983 28286310 -57152170 + AluSp SINE Alu 2 311 -2 710 212 18 30 chr17 28286414 28286579 -57151901 - MIR3 SINE MIR -13 195 33 258 56 0 0 chr17 28287034 28287070 -57151410 + (CTG)n Simple_repeat Simple_repeat 3 38 0 249 314 0 0 chr17 28287275 28287345 -57151135 - L2 LINE L2 -1 3312 3243 2180 98 7 0 chr17 28287365 28287660 -57150820 + AluSx SINE Alu 15 311 -1 345 367 80 21 chr17 28288416 28288653 -57149827 - L2 LINE L2 -1 3271 3021 1240 136 0 51 chr17 28288685 28288763 -57149717 - AluJo SINE Alu -109 203 123 2434 65 0 0 chr17 28288763 28289069 -57149411 - AluY SINE Alu -5 306 1 1240 136 0 51 chr17 28289069 28289204 -57149276 - AluJo SINE Alu -189 123 1 246 343 50 0 chr17 28290315 28290414 -57148066 + L2 LINE L2 3162 3265 -7 192 288 181 19 chr17 28290564 28290779 -57147701 + L2 LINE L2 2857 3106 -166 387 300 173 38 chr17 28291509 28291603 -57146877 + L2 LINE L2 2589 2669 -603 2241 74 3 7 chr17 28291603 28291902 -57146578 - AluY SINE Alu -13 298 1 387 300 173 38 chr17 28291902 28292393 -57146087 + L2 LINE L2 2669 3256 -16 41 78 0 0 chr17 28293920 28294010 -57144470 + GC_rich Low_complexity Low_complexity 1 90 0 229 269 6 57 chr17 28294063 28294238 -57144242 + G-rich Low_complexity Low_complexity 3 168 0 185 65 32 0 chr17 28295525 28295556 -57142924 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 1899 166 0 0 chr17 28297237 28297539 -57140941 + AluJb SINE Alu 1 302 -10 423 185 49 0 chr17 28298216 28298297 -57140183 + AluJ/FLAM SINE Alu 2 86 -226 231 36 0 0 chr17 28298304 28298332 -57140148 + (A)n Simple_repeat Simple_repeat 1 28 0 747 146 0 32 chr17 28299099 28299222 -57139258 + FLAM_C SINE Alu 15 133 -10 219 348 35 0 chr17 28299640 28299748 -57138732 - MIR SINE MIR -78 130 48 478 256 128 6 chr17 28300119 28300275 -57138205 + MIR SINE MIR 16 190 -72 294 333 108 21 chr17 28301110 28301160 -57137320 - MIR3 SINE MIR 0 208 164 2256 102 0 3 chr17 28301160 28301473 -57137007 - AluSq SINE Alu -1 312 1 294 333 108 21 chr17 28301473 28301608 -57136872 - MIR3 SINE MIR -44 164 7 550 314 94 0 chr17 28301653 28301844 -57136636 + MIR SINE MIR 45 253 -9 2081 141 0 0 chr17 28301901 28302207 -57136273 - AluSx SINE Alu -6 306 1 773 172 0 30 chr17 28302755 28302889 -57135591 + FLAM_C SINE Alu 2 131 -12 396 252 0 0 chr17 28302958 28303081 -57135399 + (TG)n Simple_repeat Simple_repeat 2 124 0 264 297 166 0 chr17 28304171 28304316 -57134164 + MIR SINE MIR 38 206 -56 352 239 11 61 chr17 28304804 28304984 -57133496 + (CCCTAG)n Simple_repeat Simple_repeat 5 175 0 405 218 11 62 chr17 28304995 28305174 -57133306 + (CCCTAG)n Simple_repeat Simple_repeat 6 175 0 502 245 47 0 chr17 28305988 28306094 -57132386 + MER103 DNA DNA 9 119 -47 2172 97 7 3 chr17 28306187 28306485 -57131995 + AluSx SINE Alu 1 299 -13 524 268 55 6 chr17 28306782 28306946 -57131534 + MIR SINE MIR 21 192 -70 295 241 18 98 chr17 28306966 28307016 -57131464 + MER94 DNA DNA 25 63 -71 1579 184 10 26 chr17 28307016 28307321 -57131159 + AluJo SINE Alu 1 300 -12 295 241 18 98 chr17 28307321 28307382 -57131098 + MER94 DNA DNA 63 127 -7 190 286 39 39 chr17 28307919 28307996 -57130484 - MIR SINE MIR -116 146 70 201 196 0 0 chr17 28309001 28309052 -57129428 + CT-rich Low_complexity Low_complexity 1 51 0 578 263 78 69 chr17 28310101 28310318 -57128162 + MIR SINE MIR 44 262 0 1711 162 3 7 chr17 28310458 28310754 -57127726 + AluJo SINE Alu 1 295 -17 2417 60 0 0 chr17 28310798 28311096 -57127384 - AluY SINE Alu -13 298 1 2486 54 0 6 chr17 28311484 28311797 -57126683 - AluY SINE Alu 0 311 1 536 283 113 30 chr17 28311877 28312213 -57126267 - L2 LINE L2 -2 3270 2907 307 186 88 69 chr17 28312578 28312680 -57125800 + MIR3 SINE MIR 105 208 0 271 283 52 104 chr17 28313119 28313292 -57125188 - MLT1K LTR MaLR -132 456 293 359 191 0 12 chr17 28313292 28313376 -57125104 + GA-rich Low_complexity Low_complexity 3 85 0 236 310 190 13 chr17 28314596 28314754 -57123726 + MIR SINE MIR 3 188 -74 668 278 64 0 chr17 28314942 28315115 -57123365 + MER91A DNA MER1_type 3 186 -10 456 315 0 8 chr17 28315112 28315242 -57123238 + MIR SINE MIR 23 151 -111 * 452 242 225 50 chr17 28316356 28316596 -57121884 + L2 LINE L2 2989 3270 -2 585 294 14 28 chr17 28316629 28316840 -57121640 + MIR SINE MIR 55 262 0 286 281 82 22 chr17 28318417 28318552 -57119928 - MIR SINE MIR -30 232 90 1933 174 7 0 chr17 28318895 28319205 -57119275 + AluJo SINE Alu 1 312 0 2579 87 0 0 chr17 28319225 28319537 -57118943 + AluSx SINE Alu 1 312 0 2115 139 3 3 chr17 28319574 28319877 -57118603 + AluSx SINE Alu 1 303 -9 2361 97 0 0 chr17 28319946 28320244 -57118236 - AluSg SINE Alu -12 298 1 1990 113 13 0 chr17 28320409 28320709 -57117771 + L1MB3 LINE L1 5495 5798 -385 2179 108 11 0 chr17 28320710 28320997 -57117483 + AluSx SINE Alu 14 303 -9 611 177 38 95 chr17 28321007 28321165 -57117315 + FRAM SINE Alu 1 149 -27 1969 122 43 8 chr17 28321165 28321474 -57117006 + L1MB3 LINE L1 5814 6138 -45 2247 109 7 10 chr17 28321474 28321776 -57116704 + AluSx SINE Alu 1 301 -11 1969 122 43 8 chr17 28321776 28321818 -57116662 + L1MB3 LINE L1 6138 6177 -6 2401 84 3 3 chr17 28322023 28322320 -57116160 + AluSp SINE Alu 4 300 -13 2307 67 9 61 chr17 28324119 28324447 -57114033 + AluY SINE Alu 1 311 0 2331 109 0 0 chr17 28324506 28324808 -57113672 - AluSg SINE Alu -8 302 1 1510 128 25 122 chr17 28324950 28325325 -57113155 - AluYb8 SINE Alu 0 344 1 2217 97 22 0 chr17 28325360 28325677 -57112803 + AluSx SINE Alu 1 323 0 232 285 161 0 chr17 28325696 28325826 -57112654 + MIR3 SINE MIR 10 160 -48 846 158 0 0 chr17 28325841 28325974 -57112506 - FLAM_C SINE Alu 0 133 1 251 289 78 11 chr17 28326093 28326183 -57112297 + L2 LINE L2 3121 3216 -56 330 87 0 0 chr17 28326203 28326249 -57112231 + (TGAA)n Simple_repeat Simple_repeat 1 46 0 256 286 69 69 chr17 28326600 28326817 -57111663 + MIR SINE MIR 21 237 -25 565 262 77 0 chr17 28328205 28328373 -57110107 - MIR SINE MIR -75 187 7 2080 139 0 19 chr17 28328440 28328750 -57109730 + AluJo SINE Alu 1 304 -8 269 348 98 16 chr17 28328838 28329022 -57109458 - MIR SINE MIR -4 258 60 2319 105 0 7 chr17 28329047 28329353 -57109127 - AluSg1 SINE Alu -4 305 2 816 128 8 8 chr17 28329460 28329593 -57108887 + FLAM_C SINE Alu 1 133 0 349 164 60 0 chr17 28329643 28329710 -57108770 + L2 LINE L2 3242 3312 -1 2257 118 0 0 chr17 28329716 28330012 -57108468 + AluSq SINE Alu 4 299 -14 2113 117 0 35 chr17 28330521 28330706 -57107774 - AluSx SINE Alu -6 306 135 189 0 0 0 chr17 28330706 28330727 -57107753 + (TA)n Simple_repeat Simple_repeat 2 22 0 2113 117 0 35 chr17 28330727 28330858 -57107622 - AluSx SINE Alu -177 135 1 324 156 13 65 chr17 28331150 28331227 -57107253 - MIR SINE MIR -62 146 74 216 0 0 0 chr17 28331817 28331841 -57106639 + (TTTTTG)n Simple_repeat Simple_repeat 1 24 0 331 320 154 23 chr17 28332602 28332777 -57105703 + MIR SINE MIR 15 212 -50 2034 149 10 10 chr17 28333010 28333319 -57105161 + AluJb SINE Alu 1 309 -3 219 186 0 0 chr17 28333319 28333362 -57105118 + GA-rich Low_complexity Low_complexity 1 43 0 1826 65 0 0 chr17 28333892 28334106 -57104374 + AluY SINE Alu 82 295 -16 492 256 77 0 chr17 28334146 28334302 -57104178 - MIR3 SINE MIR -10 198 31 2454 59 0 10 chr17 28334316 28334606 -57103874 + AluSc SINE Alu 1 287 -22 484 246 156 0 chr17 28334684 28334806 -57103674 + MIR SINE MIR 3 143 -119 1859 170 0 13 chr17 28334812 28335118 -57103362 + AluJb SINE Alu 1 302 -10 199 232 29 58 chr17 28335389 28335458 -57103022 + L2 LINE L2 3246 3312 -1 240 236 18 0 chr17 28335680 28335735 -57102745 + GA-rich Low_complexity Low_complexity 4 59 0 1384 150 15 108 chr17 28336475 28336808 -57101672 + AluJb SINE Alu 1 302 0 260 206 0 130 chr17 28336929 28336960 -57101520 - MER116 DNA Mariner 0 80 47 2279 102 0 14 chr17 28336960 28337253 -57101227 + AluSg SINE Alu 1 289 -21 260 206 0 130 chr17 28337253 28337313 -57101167 - MER116 DNA Mariner -33 47 1 333 0 0 0 chr17 28337354 28337391 -57101089 + (TG)n Simple_repeat Simple_repeat 1 37 0 2478 80 3 0 chr17 28337445 28337744 -57100736 + AluSp SINE Alu 1 300 -13 194 316 101 13 chr17 28337769 28337848 -57100632 + MIR SINE MIR 53 138 -124 1927 117 110 0 chr17 28337942 28338223 -57100257 - AluSx SINE Alu 0 312 1 2324 81 3 26 chr17 28338474 28338612 -57099868 + AluY SINE Alu 1 141 -170 2324 98 0 0 chr17 28338612 28338909 -57099571 + AluSg SINE Alu 6 302 -8 2324 81 3 26 chr17 28338909 28339078 -57099402 + AluY SINE Alu 141 301 -10 251 228 114 61 chr17 28339688 28339802 -57098678 + MIR3 SINE MIR 46 165 -43 271 281 0 12 chr17 28339804 28339886 -57098594 - MER102a DNA MER1_type -8 322 242 479 176 63 94 chr17 28339963 28340122 -57098358 - MIR SINE MIR -11 251 98 1982 159 3 3 chr17 28340327 28340635 -57097845 + AluJo SINE Alu 1 308 -4 232 132 0 26 chr17 28340652 28340690 -57097790 + AluJo SINE Alu 1 37 -266 2003 142 10 7 chr17 28340690 28340992 -57097488 - AluSx SINE Alu -9 303 1 1708 159 30 7 chr17 28340994 28341264 -57097216 - AluJb SINE Alu -22 290 15 1786 168 4 0 chr17 28341269 28341537 -57096943 + AluJo SINE Alu 21 289 -23 2212 116 14 43 chr17 28341554 28341926 -57096554 - L1MB3 LINE L1 -3 6180 5820 2391 74 3 10 chr17 28341926 28342225 -57096255 - AluY SINE Alu -6 305 9 2212 116 14 43 chr17 28342225 28342266 -57096214 - L1MB3 LINE L1 -363 5820 5779 483 176 84 2 chr17 28342451 28342575 -57095905 - L1MB3 LINE L1 -380 5791 5651 519 71 0 0 chr17 28342586 28342656 -57095824 - AluJ/FLAM SINE Alu -241 71 2 200 335 127 32 chr17 28342670 28342891 -57095589 + L3 LINE CR1 1312 1553 -24 893 339 102 24 chr17 28343649 28344307 -57094173 - L3 LINE CR1 -11 1566 858 25 31 0 0 chr17 28344656 28344688 -57093792 + AT_rich Low_complexity Low_complexity 1 32 0 1695 171 7 23 chr17 28344688 28344992 -57093488 - AluJo SINE Alu -13 299 1 480 0 56 14 chr17 28344992 28345063 -57093417 + (TTTTA)n Simple_repeat Simple_repeat 2 75 0 2231 102 0 3 chr17 28345063 28345347 -57093133 - AluSx SINE Alu -29 283 1 228 159 0 0 chr17 28345357 28345401 -57093079 - L1ME3A LINE L1 0 6170 6127 395 335 72 22 chr17 28345822 28346100 -57092380 - L2 LINE L2 -463 2851 2560 1586 126 119 35 chr17 28346101 28346386 -57092094 + AluJo SINE Alu 1 309 -3 704 128 0 0 chr17 28346420 28346529 -57091951 + FRAM SINE Alu 67 175 -1 841 111 0 0 chr17 28346529 28346637 -57091843 + AluSq/x SINE Alu 1 108 -204 489 282 35 12 chr17 28346683 28346853 -57091627 - MIR SINE MIR -61 201 28 2714 43 0 0 chr17 28347315 28347619 -57090861 + AluY SINE Alu 1 304 -7 227 180 66 16 chr17 28347982 28348043 -57090437 + MIR SINE MIR 116 179 -83 1544 158 62 34 chr17 28348167 28348459 -57090021 + AluJb SINE Alu 3 302 -10 2285 97 17 0 chr17 28348499 28348798 -57089682 - AluSx SINE Alu -8 304 1 503 283 102 37 chr17 28348798 28349042 -57089438 + L2 LINE L2 3023 3282 -31 237 132 0 0 chr17 28350294 28350332 -57088148 + (TG)n Simple_repeat Simple_repeat 1 38 0 183 281 0 18 chr17 28350858 28350915 -57087565 - MIR3 SINE MIR -29 179 124 2354 92 3 3 chr17 28353090 28353394 -57085086 + AluSx SINE Alu 1 304 -8 2395 104 0 0 chr17 28353397 28353706 -57084774 + AluSg SINE Alu 1 309 -1 996 121 0 0 chr17 28353910 28354042 -57084438 + AluSq/x SINE Alu 2 133 -180 2083 105 14 4 chr17 28354046 28354367 -57084113 + AluSg SINE Alu 2 325 0 2440 94 3 0 chr17 28354529 28354838 -57083642 + AluSq SINE Alu 1 310 -3 2282 112 3 0 chr17 28354838 28355133 -57083347 + AluSp SINE Alu 4 299 -14 322 284 222 16 chr17 28355141 28355335 -57083145 - MIR SINE MIR -13 249 16 2265 81 4 0 chr17 28355564 28355837 -57082643 - AluSp SINE Alu -39 274 1 1761 167 28 0 chr17 28355839 28356126 -57082354 - AluJo SINE Alu -17 295 1 21 36 0 0 chr17 28356631 28356659 -57081821 + AT_rich Low_complexity Low_complexity 1 28 0 2320 116 0 0 chr17 28356783 28357093 -57081387 + AluY SINE Alu 1 310 -1 2631 51 0 0 chr17 28357244 28357540 -57080940 - AluY SINE Alu -15 296 1 637 137 145 17 chr17 28357573 28357690 -57080790 + FLAM_C SINE Alu 1 132 -1 2333 106 0 0 chr17 28358024 28358317 -57080163 - AluSx SINE Alu -19 293 1 2539 51 3 0 chr17 28359028 28359322 -57079158 - AluY SINE Alu -16 295 1 2122 109 32 0 chr17 28360331 28360616 -57077864 - AluSp SINE Alu -19 294 1 1860 179 0 7 chr17 28360662 28360959 -57077521 + AluJo SINE Alu 7 301 -11 2061 146 0 3 chr17 28360991 28361285 -57077195 - AluSx SINE Alu -19 293 1 308 85 17 17 chr17 28361742 28361801 -57076679 - AluSp/q SINE Alu -1 302 244 1018 116 0 0 chr17 28361814 28361943 -57076537 - AluSq/x SINE Alu -184 129 1 571 295 95 8 chr17 28362196 28362552 -57075928 - L1ME2 LINE L1 -258 5906 5526 222 326 77 54 chr17 28363914 28364047 -57074433 + L2 LINE L2 3133 3268 -4 2249 120 0 0 chr17 28364389 28364688 -57073792 - AluJb SINE Alu -13 299 1 1923 141 23 26 chr17 28365038 28365344 -57073136 + AluJb SINE Alu 1 305 -7 1755 155 7 14 chr17 28365353 28365650 -57072830 + AluJo SINE Alu 1 295 -17 1841 100 60 0 chr17 28365780 28366031 -57072449 - AluSg SINE Alu -44 266 1 2472 94 0 0 chr17 28366983 28367290 -57071190 + AluSx SINE Alu 1 307 -5 218 322 91 25 chr17 28367320 28367441 -57071039 + MIR SINE MIR 34 162 -100 1252 144 5 63 chr17 28367552 28367774 -57070706 + AluJb SINE Alu 87 295 -17 682 225 121 0 chr17 28368306 28368488 -57069992 + L2 LINE L2 880 1083 -2231 2373 70 0 17 chr17 28368533 28368834 -57069646 + AluY SINE Alu 1 296 -15 1916 132 20 13 chr17 28368842 28369145 -57069335 + AluJb SINE Alu 1 305 -7 306 266 236 50 chr17 28369951 28370248 -57068232 - L1M2 LINE L1 -5819 1030 679 1218 126 0 11 chr17 28370828 28371003 -57067477 + AluSx SINE Alu 1 173 -139 462 144 22 11 chr17 28371004 28371094 -57067386 - MSTD-int LTR MaLR -1643 92 2 374 140 0 0 chr17 28371096 28371153 -57067327 - MSTD LTR MaLR 0 396 340 * 552 181 0 0 chr17 28371151 28371245 -57067235 - MSTC LTR MaLR -333 95 2 * 974 257 20 8 chr17 28371245 28371461 -57067019 + MLT1C LTR MaLR 214 432 -35 834 163 0 0 chr17 28372342 28372471 -57066009 - AluJb SINE Alu -181 131 3 2090 88 92 0 chr17 28372510 28372794 -57065686 + AluY SINE Alu 1 310 -1 2322 116 0 0 chr17 28372801 28373111 -57065369 + AluSg SINE Alu 1 310 0 495 249 56 56 chr17 28373179 28373370 -57065110 - HAL1 LINE L1 -737 1770 1579 2212 101 0 20 chr17 28373370 28373667 -57064813 + AluSg SINE Alu 1 291 -19 1564 87 0 0 chr17 28373724 28373919 -57064561 + AluSc SINE Alu 1 195 -114 771 102 0 0 chr17 28373920 28374018 -57064462 - AluSg SINE Alu -210 100 3 1592 146 101 0 chr17 28374021 28374309 -57064171 - L1MC3 LINE L1 -1001 6784 6468 1504 160 22 15 chr17 28374319 28374587 -57063893 + AluJo SINE Alu 7 276 -36 802 197 7 7 chr17 28374588 28374725 -57063755 - AluJo SINE Alu -174 138 2 2137 69 0 8 chr17 28374747 28375009 -57063471 - AluSc SINE Alu -11 298 39 856 184 158 127 chr17 28375051 28375120 -57063360 - MLT1A1 LTR MaLR 0 365 300 2033 140 0 29 chr17 28375120 28375435 -57063045 - AluSx SINE Alu -6 306 1 2285 87 0 26 chr17 28375439 28375748 -57062732 - AluSq SINE Alu -4 309 9 856 184 158 127 chr17 28375748 28376027 -57062453 - MLT1A1 LTR MaLR -67 298 1 713 197 14 21 chr17 28376041 28376183 -57062297 - FLAM_C SINE Alu -1 142 2 2338 84 0 16 chr17 28376189 28376497 -57061983 - AluSx SINE Alu -9 303 1 359 268 113 66 chr17 28376497 28376710 -57061770 + MIR SINE MIR 40 262 0 240 243 56 47 chr17 28376773 28376880 -57061600 - MIR SINE MIR -82 126 19 2325 86 0 10 chr17 28377042 28377343 -57061137 - AluSx SINE Alu -14 298 1 2120 79 7 0 chr17 28377476 28377788 -57060692 + AluSx SINE Alu 2 315 0 2222 75 20 7 chr17 28380151 28380444 -57058036 - AluSq SINE Alu -16 297 1 735 199 45 40 chr17 28380871 28381047 -57057433 - AluJo SINE Alu -13 299 123 2148 103 4 0 chr17 28381069 28381350 -57057130 + AluSg SINE Alu 1 282 -28 1821 107 21 107 chr17 28381674 28382011 -57056469 + AluSx SINE Alu 1 308 -4 248 209 0 0 chr17 28382044 28382087 -57056393 - Charlie5 DNA MER1_type -2407 205 163 1499 180 27 24 chr17 28382160 28382454 -57056026 - AluJo SINE Alu -17 295 1 1471 171 109 7 chr17 28382510 28382784 -57055696 - AluSx SINE Alu -10 302 1 2073 105 14 10 chr17 28382794 28383088 -57055392 - AluSg SINE Alu -15 295 1 1186 256 243 34 chr17 28383097 28383289 -57055191 - L2 LINE L2 -609 2705 2555 1749 150 29 4 chr17 28383289 28383569 -57054911 + AluJb SINE Alu 1 287 -25 1186 256 243 34 chr17 28383569 28384177 -57054303 - L2 LINE L2 -759 2555 1737 264 220 0 0 chr17 28384832 28384882 -57053598 - MER5A DNA MER1_type -1 188 139 1691 196 3 0 chr17 28385075 28385376 -57053104 + AluJb SINE Alu 1 302 -10 2369 82 0 0 chr17 28385486 28385821 -57052659 - AluSg SINE Alu 0 335 1 820 141 122 6 chr17 28385821 28385977 -57052503 - AluSg/x SINE Alu -5 307 134 1631 126 90 4 chr17 28385977 28386254 -57052226 - AluSx SINE Alu -11 301 1 572 321 94 5 chr17 28386387 28386611 -57051869 - MIR SINE MIR -10 252 9 939 177 205 20 chr17 28386843 28386966 -57051514 - AluJo SINE Alu -1 311 212 1909 145 3 26 chr17 28386966 28387277 -57051203 - AluSx SINE Alu -8 304 1 2315 111 0 0 chr17 28387279 28387585 -57050895 - AluSg SINE Alu -4 306 1 939 177 205 20 chr17 28387585 28387712 -57050768 - AluJo SINE Alu -100 212 11 1232 157 94 35 chr17 28387806 28388061 -57050419 + AluJo SINE Alu 12 281 -31 994 232 64 19 chr17 28388274 28388541 -57049939 + AluJo SINE Alu 19 297 -15 261 83 0 0 chr17 28390306 28390342 -57048138 + (TG)n Simple_repeat Simple_repeat 2 37 0 1399 191 10 41 chr17 28390343 28390637 -57047843 - AluJo SINE Alu -27 285 1 1885 98 0 0 chr17 28391326 28391562 -57046918 - AluSq SINE Alu -77 236 1 2283 86 30 0 chr17 28391704 28392005 -57046475 - AluSx SINE Alu -2 310 1 521 210 0 0 chr17 28392200 28392300 -57046180 - AluJb SINE Alu -5 307 208 227 114 0 91 chr17 28392300 28392344 -57046136 - Alu SINE Alu -262 40 1 2256 111 0 7 chr17 28392526 28392832 -57045648 - AluSg SINE Alu -6 304 1 37 23 0 0 chr17 28393749 28393793 -57044687 + AT_rich Low_complexity Low_complexity 1 44 0 21 0 0 0 chr17 28393913 28393934 -57044546 + AT_rich Low_complexity Low_complexity 1 21 0 414 0 0 0 chr17 28395414 28395460 -57043020 + (TA)n Simple_repeat Simple_repeat 1 46 0 2042 123 38 0 chr17 28396594 28396886 -57041594 + AluSx SINE Alu 1 303 -9 2154 88 10 10 chr17 28396895 28397192 -57041288 + AluSp SINE Alu 1 297 -16 1537 165 70 0 chr17 28399641 28399914 -57038566 + AluJo SINE Alu 1 292 -20 2371 82 0 0 chr17 28400193 28400486 -57037994 + AluY SINE Alu 1 293 -18 24 0 0 0 chr17 28401487 28401511 -57036969 + AT_rich Low_complexity Low_complexity 1 24 0 2088 121 0 10 chr17 28402077 28402374 -57036106 - AluSq SINE Alu -19 294 1 2353 94 7 0 chr17 28402384 28402691 -57035789 - AluY SINE Alu -2 309 1 22 35 0 0 chr17 28407395 28407424 -57031056 + AT_rich Low_complexity Low_complexity 1 29 0 2058 88 0 0 chr17 28408894 28409156 -57029324 + AluSx SINE Alu 46 307 -5 231 285 265 32 chr17 28410261 28410469 -57028011 + MIR SINE MIR 3 246 -16 675 211 32 32 chr17 28411148 28411304 -57027176 + FRAM SINE Alu 1 156 -10 2181 118 3 0 chr17 28411797 28412094 -57026386 + AluSg SINE Alu 3 300 -10 2062 103 48 0 chr17 28412949 28413241 -57025239 - AluY SINE Alu -5 306 1 291 257 101 37 chr17 28413594 28413703 -57024777 + L2 LINE L2 3149 3264 -8 532 0 0 0 chr17 28413722 28413781 -57024699 + (TTA)n Simple_repeat Simple_repeat 2 180 0 1074 134 13 0 chr17 28413781 28413930 -57024550 - AluSg/x SINE Alu -28 282 132 2249 112 0 7 chr17 28413930 28414235 -57024245 - AluSg SINE Alu -6 304 2 329 277 24 0 chr17 28414567 28414650 -57023830 - Charlie8 DNA MER1_type -989 1428 1344 208 167 95 0 chr17 28415227 28415269 -57023211 + L2 LINE L2 3219 3264 -8 1713 129 93 11 chr17 28415546 28415825 -57022655 + AluSx SINE Alu 1 302 -10 920 157 17 45 chr17 28415897 28416051 -57022429 + MER2 DNA MER2_type 4 161 -184 1647 169 16 33 chr17 28416051 28416358 -57022122 - AluJb SINE Alu -10 302 1 2179 120 0 0 chr17 28416367 28416666 -57021814 - AluSc SINE Alu -10 299 1 1057 168 86 19 chr17 28416666 28416875 -57021605 - MER44D DNA MER2_type -116 493 1 1016 123 0 0 chr17 28416915 28417061 -57021419 - AluSg/x SINE Alu -10 300 155 932 139 36 18 chr17 28417351 28417517 -57020963 - AluJb SINE Alu -23 289 121 1565 172 0 38 chr17 28417680 28417970 -57020510 + AluJb SINE Alu 13 291 -21 1560 160 0 8 chr17 28418147 28418385 -57020095 + AluJb SINE Alu 39 274 -38 2298 85 0 22 chr17 28418446 28418762 -57019718 - AluSg1 SINE Alu 0 309 1 2251 119 0 7 chr17 28418894 28419197 -57019283 - AluSg SINE Alu -9 301 1 2270 92 0 0 chr17 28419208 28419540 -57018940 - AluY SINE Alu 0 332 1 1900 89 0 45 chr17 28419964 28420233 -57018247 + AluSx SINE Alu 19 275 -37 1969 126 3 26 chr17 28420236 28420538 -57017942 - AluSc SINE Alu -13 296 2 213 39 0 0 chr17 28420553 28420579 -57017901 + (A)n Simple_repeat Simple_repeat 1 26 0 2092 95 7 17 chr17 28420584 28420879 -57017601 + AluSq SINE Alu 3 294 -19 927 244 106 18 chr17 28420900 28421297 -57017183 - L1ME3 LINE L1 -302 5860 5429 1685 180 0 10 chr17 28421411 28421706 -57016774 + AluJb SINE Alu 1 292 -20 698 253 107 49 chr17 28421751 28422157 -57016323 - L2 LINE L2 0 3313 2883 696 194 8 0 chr17 28422157 28422281 -57016199 + FLAM_A SINE Alu 3 127 -6 2169 89 31 3 chr17 28422299 28422592 -57015888 + AluSp SINE Alu 1 301 -12 2248 105 0 10 chr17 28422639 28422945 -57015535 - AluSc SINE Alu -6 303 1 1887 145 50 7 chr17 28422983 28423280 -57015200 - AluSg SINE Alu 0 310 1 1804 96 36 16 chr17 28423676 28423926 -57014554 - AluSx SINE Alu -4 308 54 28 71 0 0 chr17 28424140 28424196 -57014284 + AT_rich Low_complexity Low_complexity 1 56 0 2198 122 26 0 chr17 28424327 28424630 -57013850 + AluSx SINE Alu 1 311 -1 2445 66 13 7 chr17 28425106 28425408 -57013072 + AluY SINE Alu 1 304 -7 1926 146 34 0 chr17 28425498 28425793 -57012687 + AluJb SINE Alu 1 305 -7 1734 139 59 31 chr17 28425992 28426280 -57012200 - AluJb SINE Alu -16 296 1 2043 153 7 0 chr17 28426288 28426582 -57011898 - AluSx SINE Alu -16 296 1 23 0 0 0 chr17 28426584 28426607 -57011873 + AT_rich Low_complexity Low_complexity 1 23 0 1062 163 59 5 chr17 28426639 28426841 -57011639 - Charlie1a DNA MER1_type -226 1229 1017 * 2810 187 59 3 chr17 28426835 28427407 -57011073 - Charlie1a DNA MER1_type -813 642 39 1119 176 21 16 chr17 28427723 28427916 -57010564 + AluJo SINE Alu 89 282 -30 1886 115 67 4 chr17 28428049 28428319 -57010161 + AluSq SINE Alu 1 287 -26 1628 166 0 80 chr17 28428378 28428704 -57009776 - AluJo SINE Alu -12 300 1 900 211 0 0 chr17 28428823 28428984 -57009496 - FRAM SINE Alu -15 161 1 2182 112 17 3 chr17 28428991 28429286 -57009194 - AluSx SINE Alu -12 300 2 447 19 0 0 chr17 28429286 28429338 -57009142 + (TCTA)n Simple_repeat Simple_repeat 4 55 0 2248 119 0 0 chr17 28429338 28429624 -57008856 - AluSx SINE Alu -26 286 1 2221 125 0 3 chr17 28429671 28429974 -57008506 - AluSq SINE Alu -11 302 1 189 0 0 0 chr17 28429974 28429995 -57008485 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 1889 133 37 0 chr17 28429995 28430266 -57008214 - AluSg SINE Alu -29 281 1 207 100 0 0 chr17 28430268 28430298 -57008182 + (TTTA)n Simple_repeat Simple_repeat 1 30 0 1857 130 14 25 chr17 28430303 28430588 -57007892 - AluJo SINE Alu -30 282 1 2067 140 3 10 chr17 28430855 28431155 -57007325 - AluSq SINE Alu -15 298 1 23 33 0 0 chr17 28431580 28431610 -57006870 + AT_rich Low_complexity Low_complexity 1 30 0 316 270 54 0 chr17 28431638 28431749 -57006731 + L1M4 LINE L1 4605 4721 -1425 211 264 94 0 chr17 28431785 28431838 -57006642 + L2 LINE L2 3203 3260 -12 188 333 26 26 chr17 28432527 28432605 -57005875 - L2 LINE L2 -1 3271 3194 2051 119 14 0 chr17 28432838 28433124 -57005356 - AluSx SINE Alu -18 294 5 2007 134 17 3 chr17 28433142 28433434 -57005046 - AluSx SINE Alu -12 300 5 2230 115 0 3 chr17 28433976 28434271 -57004209 + AluSx SINE Alu 1 294 -18 2327 96 3 3 chr17 28434375 28434677 -57003803 + AluSc SINE Alu 1 302 -7 631 239 8 0 chr17 28435156 28435286 -57003194 - FLAM_A SINE Alu -1 132 2 285 260 147 80 chr17 28435346 28435423 -57003057 + MIR SINE MIR 77 147 -115 1880 159 7 0 chr17 28435423 28435712 -57002768 + AluJo SINE Alu 1 291 -21 285 260 147 80 chr17 28435712 28435784 -57002696 + MIR SINE MIR 147 236 -26 373 194 15 0 chr17 28435903 28435970 -57002510 + AluSp SINE Alu 124 191 -112 1970 131 31 3 chr17 28436045 28436335 -57002145 + AluJb SINE Alu 5 302 -10 851 150 0 8 chr17 28436683 28436816 -57001664 + FLAM_C SINE Alu 1 132 -1 2270 103 7 3 chr17 28437181 28437491 -57000989 - AluSx SINE Alu -1 311 1 225 242 0 16 chr17 28437702 28437764 -57000716 + MIR SINE MIR 152 212 -50 3322 33 0 8 chr17 28438084 28438481 -56999999 - L1PA4 LINE L1 -3 6152 5759 1714 174 7 11 chr17 28438966 28439269 -56999211 + AluJo SINE Alu 1 302 0 890 115 0 8 chr17 28439602 28439724 -56998756 + FLAM_C SINE Alu 1 121 -12 25 0 0 0 chr17 28439729 28439754 -56998726 + AT_rich Low_complexity Low_complexity 1 25 0 2336 101 0 19 chr17 28439791 28440108 -56998372 - AluSx SINE Alu -1 311 1 22 43 0 21 chr17 28440111 28440125 -56998355 + AT_rich Low_complexity Low_complexity 1 14 -32 770 178 0 0 chr17 28440125 28440243 -56998237 - FLAM_C SINE Alu -15 118 1 22 43 0 21 chr17 28440243 28440275 -56998205 + AT_rich Low_complexity Low_complexity 14 46 0 2055 100 50 30 chr17 28440280 28440526 -56997954 + AluSq SINE Alu 1 256 -57 194 81 27 0 chr17 28440526 28440563 -56997917 + (CACTT)n Simple_repeat Simple_repeat 5 42 0 2055 100 50 30 chr17 28440563 28440617 -56997863 + AluSq SINE Alu 256 307 -6 2297 112 0 0 chr17 28440617 28440911 -56997569 + AluSx SINE Alu 1 294 -18 275 95 0 0 chr17 28440911 28440953 -56997527 + L1MA4 LINE L1 6079 6120 -180 1155 127 73 54 chr17 28440953 28441158 -56997322 + AluJo SINE Alu 87 295 -17 1076 108 81 11 chr17 28441160 28441345 -56997135 + L1MA4 LINE L1 6103 6300 0 308 183 77 48 chr17 28441347 28441451 -56997029 - HAL1b LINE L1 -128 1220 1114 2148 132 0 10 chr17 28441759 28442070 -56996410 - AluSg SINE Alu -2 308 1 22 35 0 0 chr17 28442225 28442254 -56996226 + AT_rich Low_complexity Low_complexity 1 29 0 2269 93 0 50 chr17 28443016 28443337 -56995143 + AluSq SINE Alu 1 305 -8 352 239 84 59 chr17 28443402 28443641 -56994839 + L1ME3A LINE L1 895 1139 -4980 226 267 40 50 chr17 28443770 28443871 -56994609 + MLT1J LTR MaLR 110 209 -302 349 200 178 0 chr17 28443912 28444002 -56994478 + MLT1L LTR MaLR 340 445 -170 2170 108 3 46 chr17 28444022 28444347 -56994133 - AluSq SINE Alu -2 311 1 1035 90 0 8 chr17 28444351 28444484 -56993996 - AluSq/x SINE Alu -180 132 1 533 309 104 30 chr17 28444509 28445008 -56993472 - L1 LINE L1 -914 5232 4697 932 136 0 0 chr17 28445040 28445165 -56993315 - FLAM_C SINE Alu -18 125 1 1999 168 0 0 chr17 28445241 28445551 -56992929 - AluJb SINE Alu -2 310 1 1958 161 7 0 chr17 28445748 28446046 -56992434 - AluJb SINE Alu -11 301 2 1634 101 3 80 chr17 28446085 28446332 -56992148 - L1PA16 LINE L1 -110 6056 5832 2116 99 26 26 chr17 28446332 28446644 -56991836 - AluSx SINE Alu 0 312 1 1634 101 3 80 chr17 28446644 28446684 -56991796 - L1PA16 LINE L1 -334 5832 5791 317 313 112 27 chr17 28446736 28446960 -56991520 + L1ME3A LINE L1 2192 2434 -3695 465 273 88 71 chr17 28447075 28447202 -56991278 + L1ME3A LINE L1 5476 5599 -554 2384 106 0 0 chr17 28447202 28447504 -56990976 + AluSx SINE Alu 3 304 -8 465 273 88 71 chr17 28447504 28447793 -56990687 + L1ME3A LINE L1 5599 5838 -315 21 36 0 0 chr17 28447949 28447977 -56990503 + AT_rich Low_complexity Low_complexity 1 28 0 1701 128 124 0 chr17 28447984 28448249 -56990231 + AluSx SINE Alu 1 298 -4 1340 135 90 132 chr17 28448314 28448625 -56989855 - AluJo SINE Alu -10 302 5 2387 239 68 55 chr17 28448683 28449686 -56988794 - HAL1b LINE L1 -270 1078 60 2447 80 0 10 chr17 28449686 28449998 -56988482 - AluSc SINE Alu 0 309 1 2387 239 68 55 chr17 28449998 28450059 -56988421 - HAL1b LINE L1 -1288 60 1 2365 97 0 0 chr17 28450179 28450478 -56988002 + AluSx SINE Alu 1 299 -13 233 257 129 0 chr17 28450579 28450649 -56987831 - HAL1 LINE L1 -856 1651 1573 1964 153 0 25 chr17 28450654 28450974 -56987506 - AluJb SINE Alu 0 312 1 22 0 0 0 chr17 28450988 28451010 -56987470 + AT_rich Low_complexity Low_complexity 1 22 0 379 245 115 46 chr17 28451016 28451277 -56987203 - HAL1 LINE L1 -1415 1092 814 2213 118 0 0 chr17 28451524 28451812 -56986668 - AluSx SINE Alu -24 288 1 380 258 40 96 chr17 28451927 28451963 -56986517 + L1MEd LINE L1 3056 3092 -3037 1761 61 0 9 chr17 28451963 28452175 -56986305 + AluY SINE Alu 1 210 -101 380 258 40 96 chr17 28452175 28452203 -56986277 + L1MEd LINE L1 3092 3120 -3009 1407 183 30 50 chr17 28452203 28452504 -56985976 + AluJo SINE Alu 1 295 -17 380 258 40 96 chr17 28452504 28452740 -56985740 + L1MEd LINE L1 3120 3340 -2789 24 0 0 0 chr17 28452740 28452764 -56985716 + AT_rich Low_complexity Low_complexity 1 24 0 791 119 0 98 chr17 28452764 28452789 -56985691 - FLAM_C SINE Alu -173 129 103 1972 137 7 0 chr17 28452789 28453067 -56985413 + AluSx SINE Alu 1 280 -32 341 0 45 0 chr17 28453067 28453111 -56985369 + (TAAAA)n Simple_repeat Simple_repeat 5 50 0 791 119 0 98 chr17 28453111 28453227 -56985253 - FLAM_C SINE Alu -197 105 1 263 115 0 19 chr17 28453309 28453327 -56985153 + (GAA)n Simple_repeat Simple_repeat 2 19 -33 866 132 16 0 chr17 28453327 28453456 -56985024 + FLAM_C SINE Alu 3 133 0 263 115 0 19 chr17 28453456 28453489 -56984991 + (GAA)n Simple_repeat Simple_repeat 19 52 0 2177 97 7 17 chr17 28453503 28453832 -56984648 + AluSq SINE Alu 1 326 0 23 78 0 0 chr17 28454142 28454193 -56984287 + AT_rich Low_complexity Low_complexity 1 51 0 2026 138 3 3 chr17 28454309 28454607 -56983873 + AluSx SINE Alu 1 298 -14 1138 124 0 0 chr17 28454609 28454770 -56983710 + AluSg/x SINE Alu 152 312 0 22 0 0 0 chr17 28454774 28454796 -56983684 + AT_rich Low_complexity Low_complexity 1 22 0 1031 91 12 48 chr17 28454888 28455053 -56983427 - AluSp/q SINE Alu -1 312 154 43 99 0 0 chr17 28455163 28455304 -56983176 + AT_rich Low_complexity Low_complexity 1 141 0 304 191 0 0 chr17 28455308 28455371 -56983109 - FLAM_A SINE Alu 0 133 71 1444 118 10 10 chr17 28455374 28455577 -56982903 - AluSx SINE Alu -109 203 1 407 226 113 16 chr17 28455581 28455705 -56982775 + L2 LINE L2 3178 3313 0 1998 142 14 3 chr17 28455718 28456043 -56982437 + AluSx SINE Alu 1 328 0 697 199 138 69 chr17 28456055 28456261 -56982219 + AluJo SINE Alu 50 277 -35 2468 97 0 0 chr17 28456261 28456571 -56981909 + AluSg SINE Alu 1 310 0 697 199 138 69 chr17 28456571 28456610 -56981870 + AluJo SINE Alu 277 312 0 1849 140 186 14 chr17 28456673 28457038 -56981442 + MSTA LTR MaLR 1 428 0 9350 137 25 38 chr17 28457040 28458638 -56979842 + MSTA-int LTR MaLR 3 1580 0 1837 134 171 45 chr17 28458638 28458945 -56979535 + MSTA LTR MaLR 1 366 -62 2189 126 3 0 chr17 28458945 28459246 -56979234 - AluSx SINE Alu -10 302 1 1837 134 171 45 chr17 28459246 28459318 -56979162 + MSTA LTR MaLR 366 428 0 497 309 24 6 chr17 28459323 28459488 -56978992 + L1MEd LINE L1 220 387 -5732 1291 133 69 39 chr17 28459621 28459662 -56978818 - MSTA LTR MaLR 0 426 388 2201 128 0 7 chr17 28459662 28459968 -56978512 + AluSx SINE Alu 1 304 -8 1291 133 69 39 chr17 28459968 28460159 -56978321 - MSTA LTR MaLR -38 388 187 246 87 0 0 chr17 28460168 28460214 -56978266 - LTR66 LTR ERVL -171 439 394 243 146 0 0 chr17 28460214 28460255 -56978225 + (TA)n Simple_repeat Simple_repeat 1 41 0 2432 92 0 3 chr17 28460255 28460558 -56977922 - AluSc SINE Alu -7 302 1 29 0 0 0 chr17 28460563 28460592 -56977888 + AT_rich Low_complexity Low_complexity 1 29 0 1399 129 0 0 chr17 28460599 28460785 -56977695 - AluSq SINE Alu -127 186 1 1344 121 15 0 chr17 28460786 28460984 -56977496 - MSTA LTR MaLR -227 201 1 634 261 63 8 chr17 28461091 28461344 -56977136 + L1MEd LINE L1 638 904 -5215 26 74 0 0 chr17 28461372 28461426 -56977054 + AT_rich Low_complexity Low_complexity 1 54 0 2329 83 3 0 chr17 28461428 28461718 -56976762 + AluSp SINE Alu 3 293 -20 21 36 0 0 chr17 28461756 28461784 -56976696 + AT_rich Low_complexity Low_complexity 1 28 0 1277 166 64 58 chr17 28461811 28461876 -56976604 - Charlie1b DNA MER1_type -2446 315 252 2443 49 7 0 chr17 28461876 28462161 -56976319 - AluY SINE Alu -24 287 1 1277 166 64 58 chr17 28462161 28462408 -56976072 - Charlie1b DNA MER1_type -2509 252 1 257 337 0 0 chr17 28462409 28462501 -56975979 - MIR3 SINE MIR -49 159 68 48 0 0 0 chr17 28462637 28462685 -56975795 + AT_rich Low_complexity Low_complexity 1 48 0 2125 116 0 17 chr17 28463648 28463788 -56974692 + AluSx SINE Alu 1 142 -170 189 0 0 0 chr17 28463788 28463809 -56974671 + (CAA)n Simple_repeat Simple_repeat 1 21 0 2125 116 0 17 chr17 28463809 28463970 -56974510 + AluSx SINE Alu 142 297 -15 276 276 28 21 chr17 28463977 28464122 -56974358 + L1MEd LINE L1 955 1100 -5019 1089 158 187 26 chr17 28464131 28464404 -56974076 - MER33 DNA MER1_type -7 317 1 460 241 41 28 chr17 28464404 28464549 -56973931 + L1MEd LINE L1 1110 1256 -4863 313 204 102 10 chr17 28464653 28464751 -56973729 + HAL1 LINE L1 1530 1636 -871 487 76 0 152 chr17 28465005 28465064 -56973416 + MER41D LTR ERV1 2 44 -513 2343 95 0 0 chr17 28465064 28465359 -56973121 - AluSq SINE Alu -18 295 1 487 76 0 152 chr17 28465359 28465391 -56973089 + MER41D LTR ERV1 44 79 -478 2216 101 0 3 chr17 28465395 28465683 -56972797 + AluSq SINE Alu 7 293 -20 1230 101 25 0 chr17 28465683 28465842 -56972638 + AluSp SINE Alu 134 296 -17 2783 146 15 40 chr17 28465846 28466324 -56972156 + MER41D LTR ERV1 92 557 0 2175 114 7 0 chr17 28466653 28466959 -56971521 + AluSp SINE Alu 1 308 -5 211 261 72 112 chr17 28467105 28467191 -56971289 - MIR SINE MIR -2 260 172 638 207 66 0 chr17 28467191 28467312 -56971168 + FLAM_A SINE Alu 1 129 -4 211 261 72 112 chr17 28467312 28467342 -56971138 - MIR SINE MIR -90 172 142 494 102 0 136 chr17 28467342 28467406 -56971074 - L1MB3 LINE L1 -7 6176 6134 2238 118 0 9 chr17 28467406 28467721 -56970759 + AluSx SINE Alu 1 312 0 494 102 0 136 chr17 28467721 28467774 -56970706 - L1MB3 LINE L1 -49 6134 6075 211 261 72 112 chr17 28467774 28467905 -56970575 - MIR SINE MIR -120 142 22 1836 125 6 83 chr17 28467968 28468112 -56970368 + AluJo SINE Alu 1 155 -157 2341 85 0 0 chr17 28468112 28468405 -56970075 + AluY SINE Alu 6 298 -13 1836 125 6 83 chr17 28468405 28468562 -56969918 + AluJo SINE Alu 155 276 -36 2265 106 3 0 chr17 28468562 28468854 -56969626 - AluSx SINE Alu -19 293 1 1836 125 6 83 chr17 28468854 28468887 -56969593 + AluJo SINE Alu 276 310 -2 29 28 0 0 chr17 28468888 28468924 -56969556 + AT_rich Low_complexity Low_complexity 1 36 0 217 326 41 62 chr17 28468939 28469257 -56969223 - L2 LINE L2 -168 3145 2782 267 81 0 27 chr17 28469518 28469555 -56968925 - Alu SINE Alu -254 48 13 342 232 24 0 chr17 28469559 28469641 -56968839 - MIR SINE MIR -110 152 69 2230 107 0 7 chr17 28469730 28470020 -56968460 - AluSg SINE Alu -22 288 1 2288 117 6 3 chr17 28470825 28471159 -56967321 + MER1B DNA MER1_type 3 337 0 1374 102 16 0 chr17 28471224 28471410 -56967070 - AluJo SINE Alu -118 194 6 278 339 31 16 chr17 28471414 28471541 -56966939 - L3 LINE CR1 -36 1541 1413 195 310 95 32 chr17 28471735 28471893 -56966587 - L3 LINE CR1 -157 1420 1253 240 143 0 0 chr17 28471942 28471984 -56966496 + (TTCC)n Simple_repeat Simple_repeat 3 44 0 203 215 15 46 chr17 28472654 28472719 -56965761 + (CGG)n Simple_repeat Simple_repeat 1 63 0 24 32 0 0 chr17 28472796 28472827 -56965653 + GC_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr17 28472904 28472925 -56965555 + GC_rich Low_complexity Low_complexity 1 21 0 2332 113 0 0 chr17 28476042 28476352 -56962128 - AluSg SINE Alu 0 310 1 2186 107 3 28 chr17 28476529 28476846 -56961634 - AluSq SINE Alu -4 309 1 687 233 78 5 chr17 28476854 28477047 -56961433 - MIR SINE MIR -42 220 14 2006 152 0 0 chr17 28477296 28477585 -56960895 + AluJo SINE Alu 1 289 -23 1308 161 0 0 chr17 28478242 28478434 -56960046 - AluSq SINE Alu -121 192 1 2167 95 0 39 chr17 28478434 28478740 -56959740 - AluSx SINE Alu -18 294 1 671 158 0 47 chr17 28478953 28479080 -56959400 + FLAM_C SINE Alu 5 125 -8 1265 181 4 9 chr17 28479096 28479322 -56959158 + AluJb SINE Alu 86 310 -2 1794 163 33 0 chr17 28479906 28480203 -56958277 - AluJb SINE Alu 0 306 1 912 181 94 0 chr17 28480253 28480424 -56958056 + MER58A DNA MER1_type 38 224 0 1047 287 161 39 chr17 28480511 28481225 -56957255 + L3 LINE CR1 522 1322 -255 434 262 55 48 chr17 28483489 28483634 -56954846 - L2 LINE L2 -16 3297 3152 2628 53 0 3 chr17 28484037 28484339 -56954141 + AluY SINE Alu 3 303 -8 2210 116 0 10 chr17 28484546 28484712 -56953768 - AluSq SINE Alu -13 300 137 2415 62 0 7 chr17 28484712 28485004 -56953476 - AluY SINE Alu -21 290 1 2210 116 0 10 chr17 28485004 28485140 -56953340 - AluSq SINE Alu -176 137 1 1897 155 14 0 chr17 28485413 28485709 -56952771 - AluJb SINE Alu -12 300 1 2316 104 0 0 chr17 28485975 28486272 -56952208 - AluSg SINE Alu -13 297 1 272 188 29 14 chr17 28487013 28487082 -56951398 + L2 LINE L2 2996 3065 -248 1065 132 11 40 chr17 28487111 28487285 -56951195 + AluSg/x SINE Alu 126 294 -18 246 62 0 0 chr17 28487285 28487317 -56951163 + (TA)n Simple_repeat Simple_repeat 2 33 0 1557 172 20 0 chr17 28487443 28487560 -56950920 - AluJb SINE Alu -63 249 136 225 0 0 0 chr17 28487560 28487585 -56950895 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 1557 172 20 0 chr17 28487585 28487711 -56950769 - AluJb SINE Alu -176 136 1 1617 124 151 0 chr17 28487842 28488100 -56950380 - AluSx SINE Alu -5 297 1 1597 197 3 10 chr17 28488238 28488532 -56949948 - AluJo SINE Alu -18 294 3 2128 75 65 0 chr17 28488666 28488944 -56949536 + AluY SINE Alu 1 296 -15 2281 98 0 3 chr17 28489255 28489550 -56948930 - AluSg SINE Alu -16 294 1 1456 118 15 0 chr17 28489568 28489772 -56948708 + AluSq SINE Alu 104 310 -3 2318 108 0 3 chr17 28490855 28491161 -56947319 - AluSp SINE Alu -8 305 1 29 0 0 0 chr17 28491520 28491549 -56946931 + AT_rich Low_complexity Low_complexity 1 29 0 714 75 47 9 chr17 28491549 28491655 -56946825 - HY1 scRNA scRNA -1 111 2 1957 144 29 0 chr17 28493288 28493586 -56944894 - AluSx SINE Alu 0 306 1 318 138 154 0 chr17 28493659 28493724 -56944756 + MER116 DNA Mariner 1 75 -5 3712 153 97 51 chr17 28493733 28493865 -56944615 - L1MB7 LINE L1 -2 6182 6058 2201 120 0 3 chr17 28493865 28494164 -56944316 + AluSx SINE Alu 1 298 -14 2174 125 0 3 chr17 28494173 28494470 -56944010 - AluSx SINE Alu -16 296 1 3712 153 97 51 chr17 28494470 28495100 -56943380 - L1MB7 LINE L1 -133 6051 5452 2169 108 7 0 chr17 28495100 28495416 -56943064 - AluSg SINE Alu 0 318 1 2386 89 7 0 chr17 28495416 28495719 -56942761 - AluSx SINE Alu -7 305 1 3712 153 97 51 chr17 28495719 28495785 -56942695 - L1MB7 LINE L1 -731 5453 5302 1130 148 0 22 chr17 28495786 28495968 -56942512 - AluJo SINE Alu -17 295 118 2539 121 41 0 chr17 28495980 28496393 -56942087 - L1PA13 LINE L1 0 6163 5734 1224 192 46 7 chr17 28496393 28496687 -56941793 - L1MB7 LINE L1 -872 5274 4966 352 233 103 9 chr17 28498004 28498120 -56940360 + MIR SINE MIR 24 150 -112 2036 150 26 7 chr17 28498172 28498478 -56940002 - AluJb SINE Alu 0 312 1 1808 121 85 18 chr17 28498478 28498760 -56939720 - AluSg SINE Alu -9 301 1 269 306 10 10 chr17 28499464 28499562 -56938918 + L1ME LINE L1 5729 5826 -295 1541 169 35 24 chr17 28500050 28500340 -56938140 - AluJb SINE Alu -18 294 2 2016 121 0 54 chr17 28500399 28500713 -56937767 - AluSx SINE Alu -15 297 1 2228 108 3 0 chr17 28500715 28501010 -56937470 - AluSx SINE Alu -16 296 1 195 42 0 0 chr17 28501010 28501034 -56937446 + (T)n Simple_repeat Simple_repeat 1 24 0 2178 97 7 10 chr17 28501047 28501345 -56937135 + AluSx SINE Alu 1 297 -15 1129 177 19 9 chr17 28501370 28501456 -56937024 - AluJo SINE Alu -91 221 137 2160 107 0 20 chr17 28501456 28501755 -56936725 - AluSp SINE Alu -19 294 2 1129 177 19 9 chr17 28501755 28501883 -56936597 - AluJo SINE Alu -175 137 5 204 184 61 0 chr17 28501890 28501939 -56936541 + MIR3 SINE MIR 156 207 -1 1367 147 110 33 chr17 28552750 28553049 -56885431 + MER33 DNA MER1_type 1 322 -2 1931 99 39 0 chr17 28554177 28554460 -56884020 - AluSx SINE Alu -18 294 1 2470 67 3 10 chr17 28554676 28554988 -56883492 - AluSq SINE Alu -3 310 1 22 56 0 0 chr17 28556112 28556148 -56882332 + GC_rich Low_complexity Low_complexity 1 36 0 25 95 0 0 chr17 28556282 28556356 -56882124 + GC_rich Low_complexity Low_complexity 1 74 0 299 216 0 52 chr17 28556525 28556622 -56881858 + G-rich Low_complexity Low_complexity 6 97 0 291 54 0 0 chr17 28556658 28556695 -56881785 + (CCG)n Simple_repeat Simple_repeat 1 37 0 35 63 0 0 chr17 28556713 28556776 -56881704 + GC_rich Low_complexity Low_complexity 1 63 0 309 205 13 73 chr17 28556943 28557094 -56881386 + G-rich Low_complexity Low_complexity 2 143 0 21 57 0 0 chr17 28557230 28557265 -56881215 + GC_rich Low_complexity Low_complexity 1 35 0 1709 151 0 75 chr17 28566806 28567125 -56871355 + AluJo SINE Alu 4 298 -14 256 222 20 61 chr17 28568018 28568117 -56870363 + MIR SINE MIR 23 117 -91 2067 112 49 0 chr17 28568575 28568861 -56869619 + AluSg SINE Alu 1 300 -10 897 138 23 0 chr17 28568873 28569003 -56869477 + FLAM_A SINE Alu 1 133 0 2429 94 0 0 chr17 28569006 28569314 -56869166 + AluSg SINE Alu 1 308 -2 1837 176 0 19 chr17 28569329 28569647 -56868833 + AluJb SINE Alu 1 312 0 2480 76 0 10 chr17 28570377 28570681 -56867799 + AluY SINE Alu 1 301 -10 845 140 100 0 chr17 28570690 28570840 -56867640 + L1MB5 LINE L1 5577 5741 -433 232 27 54 0 chr17 28570843 28570880 -56867600 + (ATG)n Simple_repeat Simple_repeat 3 41 0 4340 133 50 67 chr17 28570884 28571795 -56866685 + MER21A LTR ERV1 29 924 -7 2091 169 51 14 chr17 28571801 28572215 -56866265 + L1MB5 LINE L1 5738 6166 -8 185 284 45 45 chr17 28574135 28574223 -56864257 - L2 LINE L2 -190 3082 2995 203 342 122 57 chr17 28574348 28574839 -56863641 + L2 LINE L2 2247 2769 -545 301 301 172 12 chr17 28575150 28575313 -56863167 + L1MEd LINE L1 356 544 -5661 337 292 193 0 chr17 28575397 28575589 -56862891 + L1MEd LINE L1 1432 1660 -4736 856 163 0 0 chr17 28575589 28575718 -56862762 + AluJo SINE Alu 1 129 -173 509 290 103 42 chr17 28576145 28576455 -56862025 + L1MEd LINE L1 2110 2438 -3958 967 204 0 0 chr17 28576488 28576650 -56861830 + AluJo SINE Alu 138 299 -3 1845 169 0 38 chr17 28576769 28577082 -56861398 + AluJb SINE Alu 1 301 -11 404 270 123 37 chr17 28577104 28577267 -56861213 + L1MEd LINE L1 2726 2902 -3313 1198 221 46 87 chr17 28577289 28577545 -56860935 + MLT1A2 LTR MaLR 1 266 -108 2388 97 0 0 chr17 28577545 28577845 -56860635 - AluSg SINE Alu -9 301 2 1198 221 46 87 chr17 28577845 28577934 -56860546 + MLT1A2 LTR MaLR 266 331 -43 2045 137 0 3 chr17 28577934 28578227 -56860253 - AluSx SINE Alu -20 292 1 1198 221 46 87 chr17 28578227 28578270 -56860210 + MLT1A2 LTR MaLR 331 374 0 443 227 184 32 chr17 28578296 28578481 -56859999 - MIR SINE MIR -48 214 2 284 271 0 0 chr17 28578565 28578635 -56859845 + L2 LINE L2 3244 3313 0 2232 73 0 14 chr17 28579228 28579503 -56858977 - AluSc SINE Alu -3 306 36 490 303 113 10 chr17 28579622 28579817 -56858663 - MIR SINE MIR -13 249 35 203 259 19 0 chr17 28580800 28580854 -56857626 + CT-rich Low_complexity Low_complexity 3 57 0 1470 189 64 14 chr17 28580877 28581157 -56857323 - AluJo SINE Alu -18 294 1 2251 107 3 3 chr17 28581670 28581969 -56856511 + AluSq SINE Alu 1 299 -14 404 258 88 88 chr17 28582638 28582820 -56855660 + L2 LINE L2 3112 3293 -20 553 130 11 11 chr17 28583471 28583563 -56854917 - AluJo SINE Alu -4 308 217 902 136 49 49 chr17 28583564 28583611 -56854869 - AluJo SINE Alu -143 169 123 2289 131 3 0 chr17 28583611 28583917 -56854563 + AluSg1 SINE Alu 1 307 -2 902 136 49 49 chr17 28583917 28584031 -56854449 - AluJo SINE Alu -188 124 8 21 0 0 0 chr17 28584069 28584090 -56854390 + AT_rich Low_complexity Low_complexity 1 21 0 527 265 164 27 chr17 28584525 28584744 -56853736 + MIR SINE MIR 9 257 -5 1456 187 82 0 chr17 28584969 28585237 -56853243 - AluJo SINE Alu -22 290 1 456 213 103 84 chr17 28587115 28587270 -56851210 - MER5B DNA MER1_type 0 178 21 376 272 160 0 chr17 28587838 28587963 -56850517 - L2 LINE L2 -1 3271 3127 200 208 0 21 chr17 28589026 28589074 -56849406 + GA-rich Low_complexity Low_complexity 4 50 0 212 275 12 0 chr17 28589115 28589195 -56849285 + (CGG)n Simple_repeat Simple_repeat 2 82 0 23 0 0 0 chr17 28589536 28589559 -56848921 + AT_rich Low_complexity Low_complexity 1 23 0 982 134 0 0 chr17 28591314 28591448 -56847032 + AluSg SINE Alu 1 134 -176 2390 110 0 0 chr17 28591448 28591758 -56846722 + AluSg SINE Alu 1 310 0 2567 51 3 0 chr17 28592472 28592767 -56845713 - AluY SINE Alu -15 296 1 204 339 0 0 chr17 28592873 28592932 -56845548 + GA-rich Low_complexity Low_complexity 4 62 0 298 312 128 8 chr17 28592958 28593083 -56845397 - MIR3 SINE MIR -49 159 20 1300 144 89 0 chr17 28593263 28593465 -56845015 + AluJb SINE Alu 85 304 -8 627 276 16 56 chr17 28593465 28593715 -56844765 + MIR SINE MIR 22 261 -1 1944 141 3 39 chr17 28594045 28594214 -56844266 - AluJo SINE Alu -11 301 146 2350 90 10 0 chr17 28594214 28594513 -56843967 - AluSg SINE Alu -8 302 1 1944 141 3 39 chr17 28594513 28594655 -56843825 - AluJo SINE Alu -166 146 1 299 53 0 0 chr17 28595222 28595260 -56843220 - U2 snRNA snRNA -150 38 1 579 320 99 32 chr17 28595518 28595921 -56842559 + L2 LINE L2 2826 3255 -17 879 217 0 0 chr17 28596311 28596472 -56842008 - AluJb SINE Alu -18 294 134 1876 166 10 19 chr17 28597163 28597471 -56841009 + AluJo SINE Alu 1 305 -7 2353 95 0 0 chr17 28597492 28597788 -56840692 - AluSg SINE Alu -14 296 1 309 109 0 0 chr17 28598086 28598132 -56840348 + (TG)n Simple_repeat Simple_repeat 2 47 0 1771 215 59 27 chr17 28598158 28598647 -56839833 + MLT1D LTR MaLR 1 505 0 396 215 137 68 chr17 28599806 28600011 -56838469 + MIR SINE MIR 35 253 -9 1992 151 0 0 chr17 28600175 28600460 -56838020 + AluJo SINE Alu 7 291 -21 421 317 71 47 chr17 28600620 28601002 -56837478 + MLT1K LTR MaLR 39 429 -159 2586 47 10 0 chr17 28602096 28602395 -56836085 + AluY SINE Alu 1 302 -9 490 317 274 22 chr17 28602663 28603443 -56835037 + L2 LINE L2 2001 2977 -337 27 33 0 50 chr17 28603792 28603832 -56834648 + AT_rich Low_complexity Low_complexity 1 39 -18 1787 171 0 20 chr17 28603832 28604124 -56834356 - AluJo SINE Alu -26 286 1 27 33 0 50 chr17 28604124 28604143 -56834337 + AT_rich Low_complexity Low_complexity 39 57 0 2255 84 0 18 chr17 28605116 28605428 -56833052 + AluSg SINE Alu 1 307 0 2422 97 0 6 chr17 28605674 28605985 -56832495 - AluSx SINE Alu -3 309 1 1323 170 23 5 chr17 28606911 28607129 -56831351 + MER58A DNA MER1_type 1 222 -2 369 270 98 49 chr17 28607476 28607639 -56830841 + HAL1b LINE L1 759 929 -419 572 229 18 12 chr17 28607654 28607824 -56830656 + MER104 DNA Tc2 3 173 -7 1762 159 0 60 chr17 28607933 28608248 -56830232 - AluJo SINE Alu -16 296 1 3519 80 2 14 chr17 28608290 28608777 -56829703 + L1PA10 LINE L1 5688 6168 0 768 145 0 0 chr17 28608808 28608925 -56829555 + FLAM_C SINE Alu 1 117 -16 423 0 0 0 chr17 28608925 28608972 -56829508 + (CA)n Simple_repeat Simple_repeat 2 48 0 1663 194 167 29 chr17 28609032 28609476 -56829004 - MLT1D LTR MaLR 0 505 1 4418 168 40 15 chr17 28609610 28609710 -56828770 + L1MB8 LINE L1 5103 5199 -979 1973 125 62 0 chr17 28609710 28609999 -56828481 + AluSx SINE Alu 1 307 -5 4418 168 40 15 chr17 28609999 28610290 -56828190 + L1MB8 LINE L1 5199 5481 -697 2428 93 7 0 chr17 28610290 28610591 -56827889 + AluSx SINE Alu 1 303 -9 4418 168 40 15 chr17 28610591 28611249 -56827231 + L1MB8 LINE L1 5481 6172 -6 238 284 25 12 chr17 28611319 28611400 -56827080 + MIR SINE MIR 181 262 0 345 276 172 0 chr17 28612444 28612578 -56825902 + L3 LINE CR1 1419 1575 -2 2604 62 0 0 chr17 28612591 28612897 -56825583 + AluY SINE Alu 1 306 -5 2299 75 7 0 chr17 28612941 28613280 -56825200 + AluY SINE Alu 1 341 0 2322 99 0 0 chr17 28613447 28613739 -56824741 - AluSx SINE Alu -20 292 1 1895 164 0 17 chr17 28613748 28614047 -56824433 - AluJb SINE Alu -18 294 1 653 291 80 8 chr17 28614800 28615037 -56823443 + MIR SINE MIR 9 262 0 1635 160 31 27 chr17 28616556 28616850 -56821630 - AluJo SINE Alu -12 300 6 366 271 84 39 chr17 28616936 28617091 -56821389 - MIR SINE MIR -4 258 97 453 277 123 0 chr17 28617179 28617309 -56821171 - L3 LINE CR1 -3 1574 1429 1995 133 0 10 chr17 28617319 28617612 -56820868 + AluSx SINE Alu 7 296 -16 1663 147 13 36 chr17 28617785 28618091 -56820389 + AluJo SINE Alu 1 299 -13 2307 112 3 0 chr17 28618354 28618659 -56819821 - AluSx SINE Alu -6 306 1 22 0 0 0 chr17 28618662 28618684 -56819796 + AT_rich Low_complexity Low_complexity 1 22 0 1748 168 3 10 chr17 28618740 28619037 -56819443 - AluJo SINE Alu -13 299 5 270 243 38 38 chr17 28619355 28619482 -56818998 + MIR SINE MIR 69 188 -61 611 64 0 0 chr17 28619504 28619582 -56818898 - MLT2A2 LTR ERVL -375 78 1 2036 120 0 0 chr17 28619746 28620021 -56818459 - AluSx SINE Alu -13 299 25 1346 186 115 4 chr17 28620359 28620628 -56817852 + AluJo SINE Alu 1 299 -13 267 31 0 0 chr17 28621201 28621233 -56817247 + (CA)n Simple_repeat Simple_repeat 1 32 0 412 224 138 17 chr17 28621395 28621511 -56816969 + L2 LINE L2 3184 3313 0 1817 167 10 3 chr17 28621719 28622019 -56816461 - AluJb SINE Alu -10 302 1 522 31 0 0 chr17 28622046 28622110 -56816370 + (TCCA)n Simple_repeat Simple_repeat 2 65 0 298 310 97 26 chr17 28622246 28622359 -56816121 - L2 LINE L2 -27 3245 3125 846 179 0 8 chr17 28622587 28622753 -56815727 + FLAM_C SINE Alu 1 165 0 303 345 95 0 chr17 28622982 28623130 -56815350 - L2 LINE L2 -229 3043 2882 318 310 83 73 chr17 28623230 28623721 -56814759 + L2 LINE L2 1980 2475 -839 218 323 47 16 chr17 28623951 28624078 -56814402 + L2 LINE L2 2589 2719 -595 32 26 0 0 chr17 28624086 28624125 -56814355 + AT_rich Low_complexity Low_complexity 1 39 0 773 313 84 31 chr17 28624313 28624799 -56813681 + L1ME LINE L1 5265 5776 -345 659 275 189 16 chr17 28625413 28625784 -56812696 + L2 LINE L2 2872 3306 -7 937 144 8 0 chr17 28626185 28626317 -56812163 - FLAM_C SINE Alu 0 133 1 2137 84 38 3 chr17 28626755 28627042 -56811438 - AluSq SINE Alu -16 297 1 1129 148 19 43 chr17 28627124 28627333 -56811147 - AluJb SINE Alu -5 307 104 358 250 13 0 chr17 28627335 28627411 -56811069 - MER58B DNA MER1_type -6 335 259 613 117 32 0 chr17 28627431 28627525 -56810955 + MER58 DNA MER1_type 121 217 -2203 679 159 22 29 chr17 28627565 28627703 -56810777 - MER58 DNA MER1_type -124 217 81 795 299 34 4 chr17 28628444 28628678 -56809802 + MIR SINE MIR 22 262 0 2210 145 5 75 chr17 28628915 28629330 -56809150 + MER57A LTR ERV1 3 388 -15 2331 85 3 3 chr17 28629609 28629904 -56808576 + AluSg SINE Alu 2 296 -14 450 0 0 0 chr17 28630162 28630212 -56808268 + (TA)n Simple_repeat Simple_repeat 2 51 0 1324 125 23 28 chr17 28630938 28631154 -56807326 - AluSq SINE Alu -15 298 84 457 221 83 69 chr17 28631282 28631436 -56807044 - L1ME LINE L1 -311 5810 5651 1842 136 51 17 chr17 28631436 28631731 -56806749 - AluJb SINE Alu -5 307 3 457 221 83 69 chr17 28631731 28631780 -56806700 - L1ME LINE L1 -470 5651 5604 271 287 96 48 chr17 28631909 28632118 -56806362 - L1ME LINE L1 -535 5586 5368 2238 116 0 22 chr17 28632165 28632484 -56805996 - AluSx SINE Alu 0 312 1 327 328 32 24 chr17 28633539 28633664 -56804816 - L2 LINE L2 -49 3223 3098 2137 121 0 3 chr17 28633975 28634272 -56804208 - AluSx SINE Alu -16 296 1 2049 110 14 14 chr17 28634705 28634995 -56803485 - AluSx SINE Alu -22 290 1 364 292 146 31 chr17 28635216 28635580 -56802900 - L2 LINE L2 -155 3117 2712 2677 33 3 0 chr17 28635808 28636113 -56802367 - AluY SINE Alu -5 306 1 410 294 0 34 chr17 28636467 28636586 -56801894 + L2 LINE L2 3199 3313 0 403 340 94 4 chr17 28636641 28636876 -56801604 - MIR SINE MIR -6 256 1 180 0 0 0 chr17 28637452 28637472 -56801008 + (A)n Simple_repeat Simple_repeat 1 20 0 388 231 102 28 chr17 28637826 28637934 -56800546 + MER94 DNA DNA 16 131 -3 276 361 72 26 chr17 28638139 28638333 -56800147 + L2 LINE L2 3070 3272 0 335 333 130 11 chr17 28639170 28639431 -56799049 + L3b LINE CR1 1281 1572 -11 2261 64 43 0 chr17 28639640 28639921 -56798559 - AluY SINE Alu -18 293 1 907 276 202 14 chr17 28641560 28642351 -56796129 + L2 LINE L2 2339 3297 -16 576 280 51 64 chr17 28642645 28642786 -56795694 - HAL1 LINE L1 -714 1793 1652 1852 169 0 16 chr17 28642786 28643094 -56795386 - AluJo SINE Alu -9 303 1 576 280 51 64 chr17 28643094 28643116 -56795364 - HAL1 LINE L1 -855 1652 1631 2453 62 0 3 chr17 28643116 28643421 -56795059 - AluY SINE Alu -7 304 1 576 280 51 64 chr17 28643421 28643552 -56794928 - HAL1 LINE L1 -876 1631 1502 627 269 19 53 chr17 28644075 28644283 -56794197 + MIR SINE MIR 7 207 -55 195 42 0 0 chr17 28645921 28645945 -56792535 + (TGAA)n Simple_repeat Simple_repeat 4 27 0 1508 152 0 86 chr17 28645945 28646235 -56792245 - AluJo SINE Alu -32 280 16 1999 137 0 3 chr17 28646238 28646538 -56791942 + AluSx SINE Alu 1 299 -13 925 136 0 45 chr17 28646547 28646702 -56791778 - AluJo SINE Alu -164 148 1 2565 62 0 3 chr17 28647004 28647309 -56791171 - AluY SINE Alu -7 304 1 200 336 35 35 chr17 28648193 28648309 -56790171 + L2 LINE L2 2794 2909 -405 1944 150 10 19 chr17 28648325 28648639 -56789841 - AluJb SINE Alu -1 311 1 2163 233 65 23 chr17 28648769 28649336 -56789144 - L1ME1 LINE L1 -5 6230 5640 4333 228 48 87 chr17 28649437 28649679 -56788801 - L1ME1 LINE L1 -2071 4144 3894 2386 77 0 3 chr17 28649679 28649977 -56788503 - AluSg SINE Alu -11 299 3 4333 228 48 87 chr17 28649977 28650850 -56787630 - L1ME1 LINE L1 -2321 3894 2988 1620 168 0 40 chr17 28650850 28651012 -56787468 - AluJb SINE Alu -20 292 125 330 26 0 0 chr17 28651012 28651051 -56787429 + (TG)n Simple_repeat Simple_repeat 2 40 0 2010 112 3 37 chr17 28651051 28651346 -56787134 - AluSx SINE Alu -27 285 1 1620 168 0 40 chr17 28651346 28651486 -56786994 - AluJb SINE Alu -185 127 1 4333 228 48 87 chr17 28651486 28652998 -56785482 - L1ME1 LINE L1 -3227 2988 1014 991 197 5 0 chr17 28652998 28653191 -56785289 - AluJb SINE Alu 0 312 119 655 111 0 0 chr17 28653284 28653374 -56785106 - AluJ/FLAM SINE Alu -222 90 1 486 105 38 105 chr17 28653691 28653772 -56784708 - L1MB2 LINE L1 -36 6135 6061 1496 134 92 42 chr17 28653772 28654055 -56784425 - AluJo SINE Alu -15 297 1 486 105 38 105 chr17 28654055 28654078 -56784402 - L1MB2 LINE L1 -110 6061 6038 301 344 22 0 chr17 28654127 28654217 -56784263 - MIR SINE MIR -81 127 36 2294 93 0 26 chr17 28654718 28655030 -56783450 + AluSx SINE Alu 1 304 -8 652 221 132 10 chr17 28655644 28655848 -56782632 - L3 LINE CR1 -696 881 653 378 350 113 39 chr17 28655851 28656160 -56782320 - L3 LINE CR1 -1200 377 46 363 197 0 13 chr17 28656384 28656460 -56782020 - MLT1K LTR MaLR -3 585 511 2423 93 0 0 chr17 28656500 28656801 -56781679 + AluSq SINE Alu 1 301 -12 1888 149 30 3 chr17 28657939 28658240 -56780240 + AluSx SINE Alu 1 309 -3 230 220 0 0 chr17 28658303 28658353 -56780127 - L1MB2 LINE L1 -30 6141 6092 186 363 93 63 chr17 28659444 28659874 -56778606 + L2 LINE L2 2824 3266 -6 387 272 136 18 chr17 28661039 28661208 -56777272 - MER5A DNA MER1_type 0 189 1 346 267 8 25 chr17 28661222 28661342 -56777138 - L1MB2 LINE L1 -1985 5823 5706 1091 172 34 14 chr17 28661487 28661727 -56776753 - L1MC3 LINE L1 -111 6055 5811 688 204 164 62 chr17 28661838 28662113 -56776367 + L1MC3 LINE L1 6040 6342 -1443 391 283 21 28 chr17 28662682 28662827 -56775653 - HAL1b LINE L1 -821 527 384 2123 121 0 3 chr17 28662926 28663224 -56775256 + AluSg SINE Alu 1 297 -13 408 207 11 0 chr17 28663486 28663573 -56774907 - HsTC2 DNA Tc2 0 1898 1811 1729 113 18 101 chr17 28664407 28664744 -56773736 + L1MA5 LINE L1 5990 6298 -2 782 288 56 10 chr17 28664935 28665223 -56773257 - L2 LINE L2 -8 3305 3005 232 264 66 33 chr17 28666694 28666815 -56771665 + L1MC4a LINE L1 5862 5986 -1822 2205 94 14 3 chr17 28666880 28667167 -56771313 + AluSx SINE Alu 21 310 -2 234 309 82 27 chr17 28667178 28667288 -56771192 - L1MC4a LINE L1 -1877 5931 5816 406 194 9 37 chr17 28667299 28667362 -56771118 - MER103 DNA DNA -57 109 49 2053 156 0 0 chr17 28667362 28667664 -56770816 + AluSx SINE Alu 1 302 -10 406 194 9 37 chr17 28667664 28667708 -56770772 - MER103 DNA DNA -117 49 5 1113 132 16 11 chr17 28667858 28668048 -56770432 - Tigger1 DNA MER2_type 0 2418 2228 13520 112 9 58 chr17 28668172 28668917 -56769563 - Tigger1 DNA MER2_type -200 2218 1438 2395 105 0 0 chr17 28668917 28669223 -56769257 - AluSx SINE Alu -6 306 1 13520 112 9 58 chr17 28669223 28670211 -56768269 - Tigger1 DNA MER2_type -980 1438 624 1548 173 88 34 chr17 28670211 28670506 -56767974 - AluJo SINE Alu -1 311 1 13520 112 9 58 chr17 28670506 28671102 -56767378 - Tigger1 DNA MER2_type -1794 624 1 2189 210 55 9 chr17 28671366 28671947 -56766533 - L1MEc LINE L1 -5336 1060 453 21 36 0 0 chr17 28672395 28672423 -56766057 + AT_rich Low_complexity Low_complexity 1 28 0 2499 66 0 0 chr17 28672792 28673095 -56765385 - AluY SINE Alu -8 303 1 791 186 0 0 chr17 28674584 28674713 -56763767 + FLAM_A SINE Alu 1 129 -4 6947 218 44 33 chr17 28674792 28675069 -56763411 + L1ME1 LINE L1 3119 3391 -2775 1857 113 3 75 chr17 28675069 28675389 -56763091 + AluSx SINE Alu 1 297 -15 6947 218 44 33 chr17 28675389 28676148 -56762332 + L1ME1 LINE L1 3391 4140 -2026 2410 86 0 7 chr17 28676148 28676451 -56762029 + AluSx SINE Alu 1 301 -11 6947 218 44 33 chr17 28676451 28678387 -56760093 + L1ME1 LINE L1 4140 6116 -50 26 74 0 0 chr17 28679171 28679225 -56759255 + AT_rich Low_complexity Low_complexity 1 54 0 426 294 77 42 chr17 28679776 28679919 -56758561 + MIR SINE MIR 42 189 -73 2021 144 3 0 chr17 28680827 28681125 -56757355 + AluSq SINE Alu 1 299 -14 2243 116 0 0 chr17 28682290 28682583 -56755897 - AluSx SINE Alu -14 298 6 200 233 23 0 chr17 28683152 28683195 -56755285 + MER5B DNA MER1_type 1 44 -134 * 314 181 28 14 chr17 28683193 28683265 -56755215 - MER5B DNA MER1_type -80 98 26 21 36 0 0 chr17 28683368 28683396 -56755084 + AT_rich Low_complexity Low_complexity 1 28 0 2004 239 61 40 chr17 28683555 28684362 -56754118 - L1MDa LINE L1 -5452 1088 34 1632 139 76 38 chr17 28684564 28684908 -56753572 - MER46B DNA MER2_type -4 232 1 1596 150 81 39 chr17 28685349 28685708 -56752772 + MLT1A2 LTR MaLR 1 374 0 611 295 156 24 chr17 28685995 28686334 -56752146 - L2 LINE L2 -10 3303 2920 214 267 19 105 chr17 28686423 28686528 -56751952 - MIR SINE MIR -20 242 147 1284 171 143 6 chr17 28687328 28687649 -56750831 - MLT1A1 LTR MaLR 0 365 1 280 188 0 0 chr17 28687804 28687852 -56750628 - MER5B DNA MER1_type -1 177 130 910 135 0 0 chr17 28687872 28688005 -56750475 - FLAM_C SINE Alu 0 133 1 708 213 14 0 chr17 28688007 28688148 -56750332 - MER5B DNA MER1_type -35 143 1 2415 98 0 9 chr17 28688429 28688744 -56749736 - AluSq SINE Alu -1 312 1 1742 153 69 0 chr17 28689210 28689484 -56748996 - AluJb SINE Alu -19 293 1 265 301 14 0 chr17 28689611 28689684 -56748796 + MIR SINE MIR 61 134 -74 281 317 89 8 chr17 28689768 28689891 -56748589 + L2 LINE L2 3138 3270 -2 6117 177 35 5 chr17 28692343 28693106 -56745374 + L1MC3 LINE L1 5441 6258 -1527 2242 98 14 10 chr17 28693106 28693402 -56745078 + AluSg1 SINE Alu 1 297 -12 6117 177 35 5 chr17 28693402 28693891 -56744589 + L1MC3 LINE L1 6258 6731 -1054 821 114 0 0 chr17 28693894 28693999 -56744481 - FLAM_C SINE Alu -20 123 19 368 147 62 78 chr17 28694009 28694104 -56744376 + L1MB8 LINE L1 6051 6145 -33 2268 136 23 43 chr17 28694104 28694233 -56744247 - MLT1B LTR MaLR 0 390 260 2209 106 0 3 chr17 28694233 28694526 -56743954 - AluY SINE Alu -19 292 1 2268 136 23 43 chr17 28694526 28694794 -56743686 - MLT1B LTR MaLR -130 260 1 368 147 62 78 chr17 28694794 28694827 -56743653 + L1MB8 LINE L1 6145 6177 -1 1645 155 13 43 chr17 28695010 28695313 -56743167 + AluJo SINE Alu 1 294 -18 427 257 228 4 chr17 28695321 28695593 -56742887 + L1MC4 LINE L1 7708 8040 -2 442 269 106 29 chr17 28695910 28696118 -56742362 + Charlie8 DNA MER1_type 6 229 -2188 315 0 0 0 chr17 28696221 28696256 -56742224 + (CA)n Simple_repeat Simple_repeat 2 36 0 242 281 109 0 chr17 28696443 28696571 -56741909 + L1M4 LINE L1 4753 4894 -1252 634 304 101 19 chr17 28696591 28697009 -56741471 + L1M4 LINE L1 2825 3276 -2870 526 209 7 65 chr17 28697188 28697341 -56741139 - L1ME3 LINE L1 -2 6160 6017 884 268 92 43 chr17 28697347 28697717 -56740763 + L2 LINE L2 2919 3306 -7 1989 102 33 11 chr17 28699045 28699319 -56739161 + AluSg SINE Alu 1 280 -30 203 239 76 33 chr17 28699561 28699653 -56738827 - MIR3 SINE MIR -3 205 110 207 318 81 28 chr17 28699729 28699940 -56738540 + L2 LINE L2 2172 2393 -921 311 267 105 0 chr17 28699991 28700096 -56738384 - L1MC4 LINE L1 0 8042 7927 422 294 131 19 chr17 28700184 28700575 -56737905 - LTR16C LTR ERVL -13 478 2 1913 150 13 7 chr17 28701015 28701321 -56737159 + AluSx SINE Alu 1 308 -4 601 181 4 6 chr17 28702702 28702862 -56735618 + L1M4 LINE L1 5178 5339 -829 423 0 0 0 chr17 28702990 28703037 -56735443 + (TG)n Simple_repeat Simple_repeat 2 48 0 714 203 43 7 chr17 28703185 28703323 -56735157 - FRAM SINE Alu -35 141 1 3800 12 0 0 chr17 28703951 28704383 -56734097 - L1PA3 LINE L1 0 6155 5724 36 40 0 0 chr17 28704515 28704565 -56733915 + AT_rich Low_complexity Low_complexity 1 50 0 33497 43 8 0 chr17 28704567 28709758 -56728722 - L1PA5 LINE L1 -5 6149 922 234 247 129 0 chr17 28709758 28709843 -56728637 - MER103 DNA DNA -69 97 2 547 133 219 0 chr17 28709973 28710078 -56728402 + FRAM SINE Alu 25 152 -24 2225 120 7 0 chr17 28711558 28711866 -56726614 + AluSx SINE Alu 1 310 -2 365 204 11 43 chr17 28711926 28712019 -56726461 + MER21B LTR ERV1 1 90 -773 1471 183 16 0 chr17 28712074 28712326 -56726154 + MER21B LTR ERV1 83 338 -525 6196 226 67 35 chr17 28712357 28712809 -56725671 - L1MEc LINE L1 -4096 2300 1864 2135 180 36 21 chr17 28712809 28713186 -56725294 - L1MB3 LINE L1 -13 6170 5783 2394 109 0 0 chr17 28713186 28713498 -56724982 - AluSx SINE Alu 0 312 1 2135 180 36 21 chr17 28713498 28713598 -56724882 - L1MB3 LINE L1 -400 5783 5686 6196 226 67 35 chr17 28713598 28715270 -56723210 - L1MEc LINE L1 -4532 1864 107 2262 110 0 7 chr17 28715301 28715602 -56722878 - AluSc SINE Alu -10 299 1 375 280 127 38 chr17 28715658 28715972 -56722508 - L1MB3 LINE L1 -2051 5757 5416 36 23 0 0 chr17 28716131 28716174 -56722306 + AT_rich Low_complexity Low_complexity 1 43 0 2624 49 0 3 chr17 28716486 28716793 -56721687 + AluY SINE Alu 1 306 -5 2153 135 3 0 chr17 28716951 28717255 -56721225 + AluSq SINE Alu 1 305 -8 2147 107 24 0 chr17 28718311 28718602 -56719878 - AluSx SINE Alu -12 300 3 1484 242 130 29 chr17 28718849 28719650 -56718830 - L2 LINE L2 0 3313 2427 1087 198 64 0 chr17 28720949 28721151 -56717329 + MER58C DNA MER1_type 1 215 0 218 261 0 0 chr17 28721180 28721226 -56717254 + (CGTG)n Simple_repeat Simple_repeat 2 47 0 486 273 8 53 chr17 28721264 28721396 -56717084 + L2 LINE L2 3147 3272 0 612 222 39 50 chr17 28722206 28722386 -56716094 + MER5B DNA MER1_type 1 178 0 321 231 81 141 chr17 28724840 28724997 -56713483 - HAL1 LINE L1 -29 2478 2313 1918 165 0 10 chr17 28724997 28725294 -56713186 + AluJb SINE Alu 1 294 -18 321 231 81 141 chr17 28725294 28725668 -56712812 - HAL1 LINE L1 -194 2313 1979 1077 202 48 40 chr17 28725941 28726017 -56712463 + MIR SINE MIR 8 82 -180 2170 98 7 7 chr17 28726017 28726313 -56712167 + AluSg SINE Alu 1 296 -14 1077 202 48 40 chr17 28726313 28726488 -56711992 + MIR SINE MIR 82 261 -1 2506 82 0 0 chr17 28726536 28726842 -56711638 - AluY SINE Alu -4 307 2 1342 240 41 36 chr17 28728423 28729077 -56709403 + L2 LINE L2 2670 3313 0 1433 299 126 42 chr17 28729081 28730061 -56708419 - HAL1 LINE L1 -1379 1128 67 189 0 0 0 chr17 28730328 28730349 -56708131 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 435 210 12 0 chr17 28732241 28732322 -56706158 - MER103 DNA DNA -13 153 72 2513 72 0 3 chr17 28732322 28732628 -56705852 - AluY SINE Alu -6 305 1 956 236 60 99 chr17 28732721 28733285 -56705195 + MER34 LTR ERV1 1 542 0 1794 170 3 13 chr17 28733511 28733822 -56704658 - AluSx SINE Alu -4 308 1 871 194 17 0 chr17 28733853 28734028 -56704452 + L1MC4 LINE L1 7743 7920 -122 2816 209 49 26 chr17 28734096 28735032 -56703448 + LTR28 LTR ERV1 3 1020 0 661 120 34 17 chr17 28735034 28735151 -56703329 + L1MC4 LINE L1 7923 8041 -1 1088 149 20 20 chr17 28735439 28735634 -56702846 - MER96B DNA MER1_type? -184 233 39 338 356 122 5 chr17 28735713 28735901 -56702579 - MIR SINE MIR -19 243 34 2052 130 0 0 chr17 28736105 28736390 -56702090 - AluSx SINE Alu -5 307 23 870 254 25 8 chr17 28736724 28736960 -56701520 - AluSg/x SINE Alu 0 309 70 339 277 140 55 chr17 28737085 28737320 -56701160 + L1M4 LINE L1 3601 3855 -2291 2202 102 0 49 chr17 28737320 28737644 -56700836 + AluSg SINE Alu 1 308 -2 198 0 0 0 chr17 28737898 28737920 -56700560 + (T)n Simple_repeat Simple_repeat 1 22 0 1507 231 65 5 chr17 28738591 28738963 -56699517 + MLT1G LTR MaLR 197 590 0 251 272 80 8 chr17 28738967 28739092 -56699388 + MLT1G-int LTR MaLR 4 137 -1234 489 341 31 5 chr17 28739099 28739322 -56699158 + MLT1G-int LTR MaLR 292 520 -851 1573 162 20 44 chr17 28740149 28740445 -56698035 - AluJo SINE Alu -23 289 1 1885 235 32 44 chr17 28740509 28740744 -56697736 + MLT1G LTR MaLR 11 247 -343 1745 126 84 11 chr17 28740744 28741030 -56697450 + AluSx SINE Alu 1 307 -5 1885 235 32 44 chr17 28741030 28741267 -56697213 + MLT1G LTR MaLR 247 479 -111 1999 113 0 36 chr17 28741267 28741569 -56696911 - AluSq SINE Alu -22 291 1 1885 235 32 44 chr17 28741569 28741593 -56696887 + MLT1G LTR MaLR 479 502 -88 25 0 0 0 chr17 28741829 28741854 -56696626 + AT_rich Low_complexity Low_complexity 1 25 0 2142 121 23 3 chr17 28741928 28742234 -56696246 - AluSx SINE Alu 0 312 1 547 220 40 0 chr17 28742445 28742545 -56695935 + FLAM_A SINE Alu 1 104 -38 234 306 105 16 chr17 28743032 28743156 -56695324 + MIR3 SINE MIR 64 198 -10 193 250 0 0 chr17 28743310 28743350 -56695130 - MIR SINE MIR -30 232 193 25 0 0 0 chr17 28744424 28744449 -56694031 + AT_rich Low_complexity Low_complexity 1 25 0 255 216 103 21 chr17 28744459 28744556 -56693924 - L1M LINE L1 -2442 5366 5262 339 256 154 26 chr17 28744703 28744937 -56693543 - L1ME4a LINE L1 -188 5933 5670 2512 64 0 0 chr17 28745645 28745940 -56692540 - AluY SINE Alu -16 295 1 252 111 0 19 chr17 28746409 28746463 -56692017 - LTR66 LTR ERVL -169 441 389 378 335 26 7 chr17 28746926 28747078 -56691402 + L2 LINE L2 2916 3070 -243 43463 33 24 1 chr17 28747088 28753103 -56685377 - L1PA2 LINE L1 0 6155 1 324 303 185 11 chr17 28753147 28753325 -56685155 + L2 LINE L2 3103 3311 -2 232 210 70 110 chr17 28754756 28754856 -56683624 + MLT1G LTR MaLR 488 583 -12 1086 210 61 34 chr17 28754987 28755360 -56683120 + MLT1D LTR MaLR 80 505 0 1811 150 4 7 chr17 28755426 28755700 -56682780 + AluJb SINE Alu 13 285 -27 623 147 52 35 chr17 28755700 28755795 -56682685 + AluJb SINE Alu 187 286 -26 378 0 0 0 chr17 28755795 28755837 -56682643 + (CA)n Simple_repeat Simple_repeat 2 43 0 623 147 52 35 chr17 28755837 28755857 -56682623 + AluJb SINE Alu 286 304 -8 276 190 76 13 chr17 28755881 28755960 -56682520 - MIR SINE MIR -44 218 135 1181 134 0 70 chr17 28755972 28756026 -56682454 - AluJo SINE Alu -125 187 131 2522 63 0 3 chr17 28756026 28756327 -56682153 - AluY SINE Alu -11 300 1 1181 134 0 70 chr17 28756327 28756473 -56682007 - AluJo SINE Alu -181 131 1 402 100 0 0 chr17 28757751 28757811 -56680669 + (TG)n Simple_repeat Simple_repeat 2 61 0 536 184 125 0 chr17 28757818 28757954 -56680526 + L1ME4a LINE L1 5963 6115 -6 387 228 82 44 chr17 28758444 28758546 -56679934 - L1ME4a LINE L1 -206 5915 5803 2198 116 0 23 chr17 28758546 28758856 -56679624 - AluSx SINE Alu -9 303 1 387 228 82 44 chr17 28758856 28758911 -56679569 - L1ME4a LINE L1 -318 5803 5752 * 1105 188 16 78 chr17 28758899 28759010 -56679470 - L1MA4A LINE L1 -7 6296 6180 1981 122 30 3 chr17 28759010 28759305 -56679175 - AluSx SINE Alu -9 303 1 1105 188 16 78 chr17 28759305 28759335 -56679145 - L1MA4A LINE L1 -123 6180 6150 2469 122 106 5 chr17 28759335 28759721 -56678759 + MSTB LTR MaLR 1 425 -1 1105 188 16 78 chr17 28759721 28759825 -56678655 - L1MA4A LINE L1 -153 6150 6070 1520 187 18 11 chr17 28759825 28760109 -56678371 + AluJo SINE Alu 16 301 -11 1105 188 16 78 chr17 28760109 28760169 -56678311 - L1MA4A LINE L1 -233 6070 6008 2382 92 3 0 chr17 28760232 28760536 -56677944 - AluSx SINE Alu -7 305 1 465 253 132 37 chr17 28760556 28760746 -56677734 - L1ME4a LINE L1 -436 5685 5478 218 415 0 0 chr17 28763155 28763261 -56675219 + L2 LINE L2 1896 2001 -1313 2826 10 0 0 chr17 28763264 28763565 -56674915 + AluYb8 SINE Alu 15 315 -3 648 278 101 66 chr17 28763588 28763915 -56674565 + L2 LINE L2 2276 2625 -689 2311 149 3 20 chr17 28763915 28764258 -56674222 - MER1B DNA MER1_type 0 337 1 648 278 101 66 chr17 28764258 28764387 -56674093 + L2 LINE L2 2625 2748 -566 387 223 192 23 chr17 28764388 28764518 -56673962 + L1ME LINE L1 2 153 -5966 683 294 10 5 chr17 28764521 28764715 -56673765 + L1ME2 LINE L1 5462 5656 -506 1214 212 16 20 chr17 28764716 28764961 -56673519 + Charlie1 DNA MER1_type 2 245 -2516 397 297 136 45 chr17 28764996 28765242 -56673238 + L1ME2 LINE L1 5646 5915 -249 216 239 85 136 chr17 28765859 28766035 -56672445 + L2 LINE L2 3029 3195 -77 643 319 25 34 chr17 28766802 28767037 -56671443 + MIR SINE MIR 9 241 -21 657 163 14 7 chr17 28767086 28767227 -56671253 + CT-rich Low_complexity Low_complexity 3 144 0 2066 111 13 19 chr17 28767788 28768095 -56670385 - AluSg SINE Alu -5 305 1 404 229 68 82 chr17 28768394 28768673 -56669807 + L1MC5 LINE L1 7653 7927 -34 995 316 92 50 chr17 28768677 28768970 -56669510 + L1ME LINE L1 2659 2939 -3190 2034 119 52 24 chr17 28768970 28769298 -56669182 - MER1B DNA MER1_type 0 337 1 995 316 92 50 chr17 28769298 28769492 -56668988 + L1ME LINE L1 2939 3124 -3005 2479 107 0 0 chr17 28769492 28769802 -56668678 + AluSx SINE Alu 1 310 -2 995 316 92 50 chr17 28769802 28770264 -56668216 + L1ME LINE L1 3124 3648 -2481 1783 177 0 13 chr17 28770392 28770697 -56667783 - AluJo SINE Alu -11 301 1 740 180 0 8 chr17 28772284 28772412 -56666068 - FLAM_A SINE Alu -6 127 1 498 281 73 16 chr17 28773235 28773427 -56665053 + L1ME LINE L1 5460 5662 -442 189 340 0 0 chr17 28773462 28773515 -56664965 - MIR SINE MIR 0 262 210 41 21 0 0 chr17 28773725 28773773 -56664707 + AT_rich Low_complexity Low_complexity 1 48 0 702 203 30 0 chr17 28773925 28774058 -56664422 - MER8 DNA MER2_type -2 237 101 2325 80 0 17 chr17 28774095 28774394 -56664086 - AluY SINE Alu -17 294 1 2387 90 33 36 chr17 28774537 28774902 -56663578 + THE1B LTR MaLR 1 364 0 2041 142 3 3 chr17 28774950 28775239 -56663241 - AluSx SINE Alu -23 289 1 371 362 77 10 chr17 28775296 28775503 -56662977 + L1ME LINE L1 4729 4949 -1197 2369 85 0 0 chr17 28775534 28775827 -56662653 - AluY SINE Alu -18 293 1 287 316 95 11 chr17 28775992 28776255 -56662225 + L1ME LINE L1 5266 5550 -612 2805 177 25 35 chr17 28776400 28776964 -56661516 + MER68 LTR ERV1 5 562 0 502 227 24 28 chr17 28777063 28777266 -56661214 + HAL1b LINE L1 1189 1340 -8 613 189 47 0 chr17 28778000 28778127 -56660353 + MER94 DNA DNA 1 133 -1 567 292 98 30 chr17 28778522 28779899 -56658581 + L1ME LINE L1 4178 5654 -508 2267 86 0 0 chr17 28780196 28780476 -56658004 + AluSg SINE Alu 1 280 -30 412 278 85 81 chr17 28780484 28780743 -56657737 + HAL1b LINE L1 346 605 -743 21 0 0 0 chr17 28780795 28780816 -56657664 + AT_rich Low_complexity Low_complexity 1 21 0 531 339 46 14 chr17 28781168 28781599 -56656881 + L1M4 LINE L1 3908 4352 -1794 764 224 90 59 chr17 28781602 28781868 -56656612 - MLT1E LTR MaLR -317 276 3 712 276 95 15 chr17 28781980 28782390 -56656090 - L1M4 LINE L1 -1094 5052 4610 1779 139 44 4 chr17 28782480 28782753 -56655727 - AluSx SINE Alu -26 286 3 3485 82 6 22 chr17 28782880 28783382 -56655098 - L1PA11 LINE L1 -1 6173 5680 3087 88 19 9 chr17 28783385 28784172 -56654308 + L1PA11 LINE L1 4873 5670 -498 688 338 147 17 chr17 28784241 28784889 -56653591 + L2 LINE L2 1974 2705 -609 186 194 0 0 chr17 28785179 28785215 -56653265 - L2 LINE L2 -977 2337 2302 24 0 0 0 chr17 28785429 28785453 -56653027 + AT_rich Low_complexity Low_complexity 1 24 0 2595 100 45 3 chr17 28785651 28786031 -56652449 + MER48 LTR ERV1 1 396 -2 1750 178 7 7 chr17 28786445 28786737 -56651743 - AluJb SINE Alu -20 292 1 2180 121 3 3 chr17 28786994 28787292 -56651188 - AluSc SINE Alu -11 298 1 1586 162 97 0 chr17 28787442 28787751 -56650729 + MER44D DNA MER2_type 1 609 0 4212 145 34 35 chr17 28789462 28790706 -56647774 + L1MA7 LINE L1 4896 6131 -160 1171 162 6 0 chr17 28790719 28790898 -56647582 - FRAM SINE Alu 0 176 1 917 112 50 0 chr17 28790898 28791059 -56647421 + L1MA6 LINE L1 6132 6300 0 23 0 0 0 chr17 28791175 28791198 -56647282 + AT_rich Low_complexity Low_complexity 1 23 0 1403 242 157 2 chr17 28791544 28792002 -56646478 + L1MC4 LINE L1 6463 6991 -1051 261 232 112 24 chr17 28792619 28792744 -56645736 - L1MC4 LINE L1 0 8042 7907 333 259 71 82 chr17 28793043 28793169 -56645311 - MER102b DNA MER1_type -1133 295 170 2480 67 0 0 chr17 28793169 28793469 -56645011 - AluY SINE Alu -11 300 1 333 259 71 82 chr17 28793469 28793512 -56644968 - MER102b DNA MER1_type -1258 170 128 1686 183 50 0 chr17 28794049 28794372 -56644108 + MER2 DNA MER2_type 1 339 -6 23 68 0 0 chr17 28794437 28794481 -56643999 + AT_rich Low_complexity Low_complexity 1 44 0 344 169 133 12 chr17 28794746 28794829 -56643651 + MER5C DNA MER1_type 32 124 -200 1516 199 20 10 chr17 28795039 28795335 -56643145 + MLT1A1 LTR MaLR 67 365 0 2235 110 3 3 chr17 28796001 28796310 -56642170 + AluY SINE Alu 1 309 -2 24 32 0 0 chr17 28796362 28796393 -56642087 + AT_rich Low_complexity Low_complexity 1 31 0 1167 198 0 55 chr17 28796463 28796701 -56641779 - AluJb SINE Alu -87 225 1 373 232 73 3 chr17 28797733 28797895 -56640585 + MLT1I LTR MaLR 270 401 -8 312 236 63 110 chr17 28797948 28798139 -56640341 - L1MC/D LINE L1 -2018 5790 5609 1627 148 31 16 chr17 28798152 28798409 -56640071 + AluJo SINE Alu 38 298 -14 1524 197 16 48 chr17 28798568 28798943 -56639537 + MLT1A1 LTR MaLR 3 365 0 279 310 0 0 chr17 28798985 28799056 -56639424 + (CATATA)n Simple_repeat Simple_repeat 1 71 0 22 70 0 0 chr17 28799134 28799177 -56639303 + AT_rich Low_complexity Low_complexity 1 43 0 1518 175 0 29 chr17 28799177 28799451 -56639029 - AluJo SINE Alu -46 266 1 2077 159 0 0 chr17 28799456 28799764 -56638716 - AluSx SINE Alu -4 308 1 2267 85 3 0 chr17 28800505 28800787 -56637693 - AluSx SINE Alu -14 298 16 513 294 162 19 chr17 28801186 28801451 -56637029 + L2 LINE L2 2238 2540 -774 265 296 11 80 chr17 28801658 28801834 -56636646 + MLT1L LTR MaLR 37 200 -415 674 214 81 38 chr17 28801922 28802132 -56636348 + MLT1L LTR MaLR 387 605 -10 723 278 66 12 chr17 28802337 28802578 -56635902 - MIR SINE MIR -3 259 6 323 258 11 43 chr17 28802868 28802961 -56635519 - MIR SINE MIR -6 256 167 356 221 0 63 chr17 28803037 28803132 -56635348 + L2 LINE L2 2483 2571 -743 547 326 58 87 chr17 28803252 28803700 -56634780 - L2 LINE L2 0 3272 2838 276 318 126 56 chr17 28803796 28804010 -56634470 - L2 LINE L2 -660 2654 2426 2273 105 0 3 chr17 28804118 28804423 -56634057 + AluSc SINE Alu 2 305 -4 875 267 116 26 chr17 28804785 28805174 -56633306 - MLT1J1 LTR MaLR -14 432 9 285 184 41 71 chr17 28805733 28805831 -56632649 - MLT1J2 LTR MaLR -287 163 69 378 295 73 123 chr17 28806138 28806480 -56632000 - L2 LINE L2 0 3272 2948 25 37 0 0 chr17 28806941 28806968 -56631512 + AT_rich Low_complexity Low_complexity 1 27 0 850 154 0 15 chr17 28807157 28807293 -56631187 - AluJo SINE Alu -178 134 1 833 220 57 68 chr17 28807747 28807910 -56630570 - MIR SINE MIR 0 262 102 2747 3 0 3 chr17 28807910 28808212 -56630268 + AluYa5 SINE Alu 1 301 -10 833 220 57 68 chr17 28808212 28808312 -56630168 - MIR SINE MIR -160 102 2 554 261 89 6 chr17 28808695 28808852 -56629628 + MIR SINE MIR 23 192 -70 527 247 33 33 chr17 28810073 28810240 -56628240 + MIR SINE MIR 41 212 -50 1187 255 79 72 chr17 28810362 28810958 -56627522 + MLT1L LTR MaLR 11 610 -5 30 0 0 0 chr17 28811015 28811045 -56627435 + AT_rich Low_complexity Low_complexity 1 30 0 301 194 0 15 chr17 28813459 28813526 -56624954 + MARNA DNA Mariner 40 105 -481 222 37 0 0 chr17 28814103 28814130 -56624350 + (CGTG)n Simple_repeat Simple_repeat 1 27 0 522 109 209 18 chr17 28814381 28814491 -56623989 + LTR7 LTR ERV1 1 131 -319 2795 143 14 8 chr17 28814491 28814981 -56623499 + HERVH LTR ERV1 3 495 -7218 3878 123 20 31 chr17 28814999 28815709 -56622771 + HERVH LTR ERV1 791 1492 -6221 1652 162 3 26 chr17 28816494 28816796 -56621684 + AluJo SINE Alu 1 295 -17 21 36 0 0 chr17 28817266 28817294 -56621186 + AT_rich Low_complexity Low_complexity 1 28 0 458 279 61 12 chr17 28817590 28817837 -56620643 + L1MC4a LINE L1 5666 5924 -1884 267 294 0 35 chr17 28818991 28819076 -56619404 - L2 LINE L2 0 3313 3232 2223 65 41 3 chr17 28819149 28819439 -56619041 + AluY SINE Alu 1 301 -10 351 285 34 72 chr17 28820620 28821085 -56617395 + L1MC4a LINE L1 5573 6016 -105 221 326 0 35 chr17 28821250 28821336 -56617144 + MIR SINE MIR 97 179 -83 266 228 149 26 chr17 28822673 28822787 -56615693 + HAL1 LINE L1 10 137 -2370 291 266 145 29 chr17 28822802 28823009 -56615471 - L1ME LINE L1 -294 5827 5597 22 35 0 0 chr17 28823307 28823336 -56615144 + AT_rich Low_complexity Low_complexity 1 29 0 472 302 0 7 chr17 28823835 28823974 -56614506 + MIR SINE MIR 17 154 -108 1944 144 3 13 chr17 28824160 28824458 -56614022 + AluSx SINE Alu 1 295 -17 26 30 0 0 chr17 28824847 28824880 -56613600 + AT_rich Low_complexity Low_complexity 1 33 0 670 234 0 0 chr17 28824919 28825043 -56613437 + FLAM_A SINE Alu 1 124 -9 199 282 39 51 chr17 28825442 28825520 -56612960 - L2 LINE L2 -17 3296 3220 770 280 100 14 chr17 28826912 28827262 -56611218 + L2 LINE L2 1775 2154 -1160 2043 115 7 7 chr17 28827965 28828260 -56610220 + AluSx SINE Alu 1 295 -17 4004 103 51 36 chr17 28828721 28828853 -56609627 - L1PB2 LINE L1 0 6151 6022 2309 85 3 3 chr17 28828853 28829146 -56609334 - AluSc SINE Alu -16 293 1 4004 103 51 36 chr17 28829146 28829680 -56608800 - L1PB2 LINE L1 -129 6022 5475 4692 186 41 23 chr17 28829680 28830849 -56607631 - L1PB2 LINE L1 -952 5194 4005 1140 269 68 25 chr17 28830970 28831409 -56607071 + MLT1C LTR MaLR 1 458 -9 195 231 328 15 chr17 28831875 28832009 -56606471 + L2 LINE L2 3077 3252 -61 905 180 205 11 chr17 28832242 28832525 -56605955 + L1MC4 LINE L1 6683 7020 -1022 2458 91 0 3 chr17 28832525 28832832 -56605648 + AluSx SINE Alu 1 306 -6 938 241 38 35 chr17 28832832 28833172 -56605308 + L1MC4 LINE L1 7697 8037 -5 650 294 65 14 chr17 28833483 28833776 -56604704 - L1ME LINE L1 -302 5819 5512 1482 188 4 11 chr17 28834082 28834354 -56604126 - AluJo SINE Alu -1 311 42 219 128 170 0 chr17 28834381 28834428 -56604052 + MIR SINE MIR 33 87 -175 198 273 18 18 chr17 28834636 28834691 -56603789 + L2 LINE L2 2243 2297 -1017 313 341 166 18 chr17 28834718 28834947 -56603533 + L2 LINE L2 2386 2648 -666 661 280 126 54 chr17 28835021 28835450 -56603030 + L2 LINE L2 2853 3312 -1 480 329 67 18 chr17 28836421 28837048 -56601432 - L1MEd LINE L1 -756 1734 988 879 199 60 45 chr17 28837072 28837338 -56601142 - L1ME2 LINE L1 -1 6163 5894 1974 124 3 17 chr17 28837359 28837658 -56600822 + AluSx SINE Alu 1 295 -17 1608 271 94 80 chr17 28837664 28838297 -56600183 + L2 LINE L2 2007 2669 -644 2412 60 0 10 chr17 28838297 28838597 -56599883 - AluY SINE Alu -14 297 1 1608 271 94 80 chr17 28838597 28839005 -56599475 + L2 LINE L2 2669 3070 -243 25 31 0 0 chr17 28839027 28839059 -56599421 + AT_rich Low_complexity Low_complexity 1 32 0 1011 232 30 21 chr17 28839242 28839479 -56599001 - MIR SINE MIR -11 251 13 647 294 113 0 chr17 28839515 28839746 -56598734 - MIR SINE MIR 0 262 6 241 228 0 18 chr17 28839861 28839918 -56598562 - L2 LINE L2 -1 3312 3257 188 292 21 0 chr17 28840577 28840625 -56597855 + MIR SINE MIR 214 262 0 1707 228 31 35 chr17 28841201 28841680 -56596800 - MLT1D LTR MaLR 0 505 29 956 259 52 65 chr17 28841729 28842111 -56596369 + MER21B LTR ERV1 26 402 -461 635 268 31 55 chr17 28842116 28842370 -56596110 + MER21B LTR ERV1 507 754 -109 567 252 101 59 chr17 28842443 28842851 -56595629 + MLT1H LTR MaLR 12 548 -1 482 280 104 43 chr17 28843887 28844203 -56594277 + L1MEc LINE L1 790 1085 -5311 2351 94 0 25 chr17 28844203 28844523 -56593957 + AluSx SINE Alu 1 312 0 482 280 104 43 chr17 28844523 28845089 -56593391 + L1MEc LINE L1 1085 1755 -4641 2158 139 0 7 chr17 28845112 28845421 -56593059 + AluSx SINE Alu 6 312 0 377 171 65 12 chr17 28845545 28845715 -56592765 + (TA)n Simple_repeat Simple_repeat 2 180 0 305 336 77 18 chr17 28845827 28846047 -56592433 + L1MEc LINE L1 1909 2141 -4255 1308 262 83 15 chr17 28846686 28847187 -56591293 + L1MEc LINE L1 2215 2785 -3430 2178 102 7 7 chr17 28847187 28847482 -56590998 - AluSg SINE Alu -15 295 1 1308 262 83 15 chr17 28847482 28847727 -56590753 + L1MEc LINE L1 2785 3012 -3203 520 329 92 45 chr17 28848897 28849365 -56589115 - L1MEd LINE L1 -4024 2286 1797 255 314 48 28 chr17 28849370 28849618 -56588862 - L1MEd LINE L1 -4572 1738 1486 1078 276 97 27 chr17 28849621 28849894 -56588586 - L1MEd LINE L1 -4869 1250 997 2158 104 10 10 chr17 28849894 28850192 -56588288 - AluSg SINE Alu -8 302 5 1078 276 97 27 chr17 28850192 28850586 -56587894 - L1MEd LINE L1 -5122 997 615 8526 168 68 38 chr17 28850586 28852288 -56586192 + MER52A LTR ERV1 4 1755 0 1078 276 97 27 chr17 28852288 28852583 -56585897 - L1MEd LINE L1 -5504 615 342 322 273 101 57 chr17 28852703 28852912 -56585568 - L1MEd LINE L1 -5891 228 11 383 291 125 66 chr17 28852924 28853794 -56584686 - L1M4 LINE L1 -2399 3747 2930 1899 140 0 38 chr17 28853794 28854086 -56584394 + AluSx SINE Alu 1 281 -31 378 0 0 0 chr17 28854088 28854130 -56584350 + (CA)n Simple_repeat Simple_repeat 2 43 0 383 291 125 66 chr17 28854130 28854195 -56584285 - L1M4 LINE L1 -3216 2930 2870 1791 137 23 23 chr17 28854195 28854495 -56583985 - AluSx SINE Alu -11 301 2 383 291 125 66 chr17 28854495 28855007 -56583473 - L1M4 LINE L1 -3276 2870 2210 279 301 15 52 chr17 28855250 28855386 -56583094 + MLT1J LTR MaLR 1 131 -380 722 252 35 22 chr17 28855451 28855681 -56582799 + MLT1J LTR MaLR 279 511 0 1534 181 60 3 chr17 28856405 28856687 -56581793 - AluJb SINE Alu -14 298 1 716 151 118 0 chr17 28856687 28856806 -56581674 - AluJo SINE Alu -177 135 3 21 0 0 0 chr17 28857646 28857667 -56580813 + AT_rich Low_complexity Low_complexity 1 21 0 3338 46 2 2 chr17 28858281 28858695 -56579785 + L1PA5 LINE L1 5737 6150 -4 1882 133 14 10 chr17 28859528 28859822 -56578658 - AluJo SINE Alu -17 295 1 198 191 0 0 chr17 28860019 28860066 -56578414 + (CA)n Simple_repeat Simple_repeat 2 48 0 904 191 12 12 chr17 28860133 28860306 -56578174 + FRAM SINE Alu 1 173 -3 1933 65 0 51 chr17 28860820 28861112 -56577368 + AluY SINE Alu 35 311 0 1385 144 19 41 chr17 28861123 28861394 -56577086 - MER2 DNA MER2_type -80 265 1 231 288 27 14 chr17 28861803 28861876 -56576604 + L2 LINE L2 633 706 -2608 2966 264 100 17 chr17 28861881 28862662 -56575818 + L2 LINE L2 1764 2479 -834 2198 80 0 14 chr17 28862662 28862988 -56575492 - AluY SINE Alu 0 322 1 2966 264 100 17 chr17 28862988 28863627 -56574853 + L2 LINE L2 2479 3299 -14 186 191 43 21 chr17 28864693 28864740 -56573740 - MIR SINE MIR -93 115 68 273 333 0 0 chr17 28865615 28865714 -56572766 + (TA)n Simple_repeat Simple_repeat 2 100 0 542 235 18 48 chr17 28865877 28866043 -56572437 + MIR3 SINE MIR 31 191 -17 852 237 135 53 chr17 28866459 28866655 -56571825 + MLT1D LTR MaLR 1 179 -326 2348 89 0 0 chr17 28866655 28866947 -56571533 + AluSx SINE Alu 12 303 -9 852 237 135 53 chr17 28866947 28867201 -56571279 + MLT1D LTR MaLR 179 488 -17 196 253 52 154 chr17 28867407 28867640 -56570840 + L2 LINE L2 2919 3127 -145 566 249 158 18 chr17 28868287 28868508 -56569972 + MLT1J2 LTR MaLR 55 306 -144 1851 159 14 0 chr17 28868555 28868838 -56569642 + AluSx SINE Alu 1 287 -25 352 331 60 24 chr17 28868993 28869159 -56569321 - MIR SINE MIR -70 192 21 2211 84 0 11 chr17 28869444 28869756 -56568724 + AluY SINE Alu 1 309 0 256 149 43 0 chr17 28869927 28869974 -56568506 + MIR SINE MIR 147 195 -67 34 42 0 0 chr17 28870215 28870263 -56568217 + AT_rich Low_complexity Low_complexity 1 48 0 5150 172 43 27 chr17 28870550 28872518 -56565962 + L1PB4 LINE L1 4156 6154 -2 2211 110 7 0 chr17 28872737 28873036 -56565444 + AluSx SINE Alu 1 301 -11 226 286 0 32 chr17 28873202 28873265 -56565215 - L2 LINE L2 0 3272 3212 268 338 0 0 chr17 28873393 28873473 -56565007 + L2 LINE L2 3230 3309 -4 1060 136 38 0 chr17 28876437 28876621 -56561859 + MER20 DNA MER1_type 17 207 -12 1663 179 68 97 chr17 28877157 28877867 -56560613 + L1MC5 LINE L1 7238 7926 -35 930 304 88 34 chr17 28880413 28880979 -56557501 + L2 LINE L2 1796 2392 -922 639 276 75 114 chr17 28881019 28881501 -56556979 - L2 LINE L2 -4 3268 2806 590 298 38 72 chr17 28881518 28881753 -56556727 + L2 LINE L2 2477 2719 -595 2382 104 7 0 chr17 28881753 28882062 -56556418 + AluSx SINE Alu 2 312 0 2258 81 7 10 chr17 28882067 28882362 -56556118 + AluY SINE Alu 1 294 -17 590 298 38 72 chr17 28882362 28882439 -56556041 + L2 LINE L2 2723 2784 -530 404 305 70 18 chr17 28882505 28882793 -56555687 + L1ME LINE L1 5182 5483 -751 2278 98 7 3 chr17 28882806 28883101 -56555379 + AluSx SINE Alu 4 299 -13 347 262 67 24 chr17 28883106 28883270 -56555210 + L1ME LINE L1 5611 5781 -340 2236 134 35 32 chr17 28883300 28883734 -56554746 + L1MA7 LINE L1 5856 6290 -1 3143 149 79 4 chr17 28884761 28885694 -56552786 - L1PBa LINE L1 -3324 3538 2532 2522 135 19 9 chr17 28885694 28886115 -56552365 + MER57B LTR ERV1 1 425 -9 6886 85 21 26 chr17 28886119 28886575 -56551905 - L1PBa LINE L1 -4328 2535 2078 1712 154 0 7 chr17 28886575 28886855 -56551625 - AluY SINE Alu -33 278 1 6886 85 21 26 chr17 28886855 28887492 -56550988 - L1PBa LINE L1 -4785 2078 1447 1752 255 38 65 chr17 28887762 28888867 -56549613 - L2 LINE L2 -1 3312 2237 2376 78 7 0 chr17 28889308 28889615 -56548865 + AluY SINE Alu 1 309 -2 897 165 48 37 chr17 28889616 28889804 -56548676 + AluJb SINE Alu 123 312 0 237 86 0 0 chr17 28889829 28889864 -56548616 + U2 snRNA snRNA 1 35 -153 214 287 161 23 chr17 28889886 28889973 -56548507 - MIR3 SINE MIR -99 109 11 554 261 89 6 chr17 28891058 28891215 -56547265 + MIR SINE MIR 23 192 -70 707 245 117 5 chr17 28892155 28892351 -56546129 - MIR SINE MIR 0 262 45 2810 171 89 26 chr17 28892546 28893288 -56545192 + L1MA9 LINE L1 5490 6278 -34 2611 74 8 11 chr17 28893306 28893670 -56544810 - L1PA13 LINE L1 -2 6161 5799 285 29 0 0 chr17 28893970 28894004 -56544476 + (CA)n Simple_repeat Simple_repeat 1 34 0 2722 27 0 6 chr17 28894299 28894636 -56543844 + L1P2 LINE L1 5482 5816 -339 3358 141 11 51 chr17 28895282 28895950 -56542530 - L1MB3 LINE L1 -1 6182 5542 21 36 0 0 chr17 28895996 28896024 -56542456 + AT_rich Low_complexity Low_complexity 1 28 0 265 231 39 26 chr17 28896509 28896587 -56541893 - L2 LINE L2 0 3272 3194 1833 152 3 44 chr17 28896809 28897125 -56541355 - AluJo SINE Alu -9 303 1 1888 177 0 16 chr17 28897288 28897605 -56540875 + AluJb SINE Alu 1 312 0 201 231 0 0 chr17 28898031 28898070 -56540410 + GA-rich Low_complexity Low_complexity 2 40 0 543 288 49 24 chr17 28898179 28898384 -56540096 + MIR SINE MIR 21 230 -32 2445 83 0 0 chr17 28898800 28899102 -56539378 - AluY SINE Alu -9 302 1 505 224 0 10 chr17 28899405 28899503 -56538977 + MIR SINE MIR 45 141 -121 229 167 0 0 chr17 28899766 28899808 -56538672 - MLT1J LTR MaLR -338 173 132 928 64 0 0 chr17 28899895 28900020 -56538460 - L1PA5 LINE L1 0 6154 6030 255 233 27 27 chr17 28900358 28900431 -56538049 - L2 LINE L2 -56 3257 3185 259 325 98 56 chr17 28900499 28900805 -56537675 + L2 LINE L2 2430 2756 -558 2191 121 0 0 chr17 28900805 28901110 -56537370 + AluSc SINE Alu 1 305 -4 259 325 98 56 chr17 28901110 28901179 -56537301 + L2 LINE L2 2756 2821 -493 252 388 69 47 chr17 28901262 28901582 -56536898 + L2 LINE L2 2946 3272 0 * 710 323 146 16 chr17 28901581 28902012 -56536468 - L3 LINE CR1 -175 1402 916 276 299 150 14 chr17 28902239 28902386 -56536094 - MIR SINE MIR -10 252 86 2134 208 30 132 chr17 28902423 28903402 -56535078 - L1ME3 LINE L1 -30 6132 5254 376 312 71 30 chr17 28903687 28903982 -56534498 - L1ME LINE L1 -482 5639 5333 339 316 44 71 chr17 28904493 28904881 -56533599 - L2 LINE L2 -5 3308 2620 365 367 94 0 chr17 28906182 28906362 -56532118 - L2 LINE L2 -56 3216 3020 219 227 0 45 chr17 28906682 28906748 -56531732 + CT-rich Low_complexity Low_complexity 3 65 0 318 322 46 40 chr17 28906761 28906935 -56531545 - MLT1K LTR MaLR -240 348 174 2092 144 17 6 chr17 28906937 28907283 -56531197 + MER47A DNA MER2_type 1 350 -16 1832 169 10 10 chr17 28907283 28907579 -56530901 + AluJb SINE Alu 1 296 -16 404 333 88 54 chr17 28907700 28908382 -56530098 - L2 LINE L2 -1640 1674 970 209 189 0 0 chr17 28908615 28908652 -56529828 + CT-rich Low_complexity Low_complexity 1 37 0 2454 87 0 6 chr17 28908984 28909296 -56529184 - AluSx SINE Alu -2 310 1 21 57 0 0 chr17 28910068 28910103 -56528377 + AT_rich Low_complexity Low_complexity 1 35 0 226 167 0 21 chr17 28910103 28910151 -56528329 + (CA)n Simple_repeat Simple_repeat 2 48 0 703 78 39 39 chr17 28910358 28910538 -56527942 + (TA)n Simple_repeat Simple_repeat 1 180 0 1693 162 3 21 chr17 28910557 28910841 -56527639 + AluJo SINE Alu 12 290 -22 23 33 0 0 chr17 28910853 28910883 -56527597 + AT_rich Low_complexity Low_complexity 1 30 0 334 186 29 49 chr17 28911157 28911259 -56527221 + L1ME4a LINE L1 5964 6063 -58 881 164 68 0 chr17 28911731 28911908 -56526572 - MER3 DNA MER1_type 0 209 21 1697 166 7 30 chr17 28912811 28913112 -56525368 + AluJo SINE Alu 4 297 -15 1921 154 3 3 chr17 28913642 28913928 -56524552 - AluSx SINE Alu -26 286 1 863 195 169 16 chr17 28914287 28914594 -56523886 + L1MC4 LINE L1 7688 8041 -1 6689 18 3 0 chr17 28915171 28915939 -56522541 + L1PA2 LINE L1 5382 6151 -4 22 70 0 0 chr17 28916569 28916612 -56521868 + AT_rich Low_complexity Low_complexity 1 43 0 210 37 0 0 chr17 28917117 28917144 -56521336 + (CAA)n Simple_repeat Simple_repeat 2 28 0 261 334 173 20 chr17 28917166 28917507 -56520973 + L2 LINE L2 1214 1606 -1708 1964 132 39 27 chr17 28917735 28918068 -56520412 - MER1B DNA MER1_type 0 337 1 1455 209 117 32 chr17 28919546 28919957 -56518523 - L1ME3A LINE L1 -9 6161 5716 489 336 124 24 chr17 28920581 28921170 -56517310 + L2 LINE L2 1541 2188 -1126 293 306 110 50 chr17 28921352 28921571 -56516909 + MIR SINE MIR 25 256 -6 2411 70 0 7 chr17 28921660 28921961 -56516519 + AluY SINE Alu 1 299 -12 320 351 48 12 chr17 28922449 28922614 -56515866 - L3 LINE CR1 -12 1565 1395 2218 218 120 32 chr17 28922618 28923701 -56514779 - L1MC4 LINE L1 -245 7797 6460 452 314 186 9 chr17 28923949 28924175 -56514305 - L3 LINE CR1 -219 1358 1093 973 257 158 54 chr17 28924181 28924733 -56513747 + MLT1L LTR MaLR 7 615 0 2365 89 10 3 chr17 28925439 28925743 -56512737 - AluY SINE Alu -5 306 1 1839 150 7 14 chr17 28926117 28926411 -56512069 + AluJb SINE Alu 1 292 -20 363 302 101 57 chr17 28926454 28926752 -56511728 + L2 LINE L2 2942 3252 -61 326 264 139 40 chr17 28926781 28926982 -56511498 + L1ME4a LINE L1 5822 6042 -79 190 306 222 14 chr17 28927256 28927400 -56511080 - MER5B DNA MER1_type 0 178 5 2403 85 0 0 chr17 28978553 28978859 -56459621 - AluSq SINE Alu -7 306 1 316 344 104 32 chr17 28980201 28980576 -56457904 - L2 LINE L2 -36 3236 2835 2139 118 0 0 chr17 28984045 28984349 -56454131 - AluSx SINE Alu -8 304 1 2212 103 3 6 chr17 28985582 28985893 -56452587 + AluSx SINE Alu 1 310 -2 372 222 160 28 chr17 28986960 28987104 -56451376 - MER103 DNA DNA -2 164 2 777 285 109 8 chr17 28987723 28987979 -56450501 + MER102a DNA MER1_type 39 320 -10 1788 134 36 0 chr17 28988232 28988509 -56449971 + AluJb SINE Alu 1 287 -25 22 0 0 0 chr17 28988514 28988536 -56449944 + AT_rich Low_complexity Low_complexity 1 22 0 364 219 79 18 chr17 28990047 28990161 -56448319 + MIR SINE MIR 17 137 -125 274 323 73 0 chr17 28990757 28990853 -56447627 - L2 LINE L2 -9 3263 3161 806 133 0 16 chr17 28991032 28991160 -56447320 + AluJb SINE Alu 161 286 -26 344 330 28 0 chr17 28991314 28991420 -56447060 - MIR SINE MIR -104 158 50 381 191 18 73 chr17 28991512 28991622 -56446858 + MER112 DNA MER1_type 148 251 -9 233 287 139 33 chr17 28991775 28991897 -56446583 - L2 LINE L2 -4 3309 3175 232 324 28 19 chr17 28992185 28992293 -56446187 - L2 LINE L2 -463 2851 2743 548 240 118 14 chr17 28992333 28992706 -56445774 - L1M4 LINE L1 -653 5521 5107 181 247 75 32 chr17 28992945 28993038 -56445442 - L2 LINE L2 -260 3012 2916 1137 275 116 73 chr17 28993038 28994095 -56444385 - L2 LINE L2 -43 3229 2148 267 241 13 25 chr17 28994143 28994222 -56444258 + L2 LINE L2 3220 3297 -16 662 0 0 13 chr17 28994475 28994554 -56443926 + (TTCC)n Simple_repeat Simple_repeat 3 80 0 1758 166 0 16 chr17 28994554 28994858 -56443622 - AluJb SINE Alu -11 301 1 413 274 36 135 chr17 28995582 28995700 -56442780 - L2 LINE L2 0 3272 3195 671 216 58 23 chr17 28995700 28995871 -56442609 - MER5B DNA MER1_type 0 178 2 413 274 36 135 chr17 28995871 28996026 -56442454 - L2 LINE L2 -77 3195 3026 527 240 75 27 chr17 28996165 28996311 -56442169 + MER63A DNA MER1_type 58 210 0 232 341 79 43 chr17 28996608 28996772 -56441708 + L2 LINE L2 3113 3282 -31 23 0 0 0 chr17 28996796 28996819 -56441661 + AT_rich Low_complexity Low_complexity 1 23 0 207 116 70 0 chr17 28996838 28996881 -56441599 + T-rich Low_complexity Low_complexity 1 46 0 4714 28 0 2 chr17 28996883 28997426 -56441054 - L1PA5 LINE L1 -3 6151 5610 280 264 81 11 chr17 28997443 28997530 -56440950 + MIR SINE MIR 6 98 -164 207 69 0 0 chr17 28997534 28997563 -56440917 + (TG)n Simple_repeat Simple_repeat 1 29 0 199 357 14 0 chr17 28997564 28997634 -56440846 + MIR SINE MIR 183 253 -9 2039 130 0 0 chr17 28997642 28997934 -56440546 + AluSx SINE Alu 1 292 -20 2248 109 41 49 chr17 28998998 28999365 -56439115 + THE1B LTR MaLR 1 364 0 1406 159 41 25 chr17 28999464 28999571 -56438909 - L1MA4 LINE L1 -2 6298 6194 2787 112 40 7 chr17 28999571 28999991 -56438489 - MER57B LTR ERV1 0 434 1 1406 159 41 25 chr17 28999991 29000198 -56438282 - L1MA4 LINE L1 -106 6194 5979 205 283 61 10 chr17 29000410 29000509 -56437971 - MIR SINE MIR -77 131 28 493 287 82 49 chr17 29000768 29000974 -56437506 - MIR SINE MIR -17 245 34 817 217 42 0 chr17 29001705 29001871 -56436609 - MIR SINE MIR -58 204 32 443 252 19 65 chr17 29001911 29002012 -56436468 + MIR SINE MIR 49 142 -120 1771 137 7 23 chr17 29002012 29002311 -56436169 + AluJo SINE Alu 1 294 -18 443 252 19 65 chr17 29002311 29002364 -56436116 + MIR SINE MIR 142 196 -66 259 270 151 63 chr17 29002465 29002591 -56435889 - MIR3 SINE MIR -2 206 70 1089 248 42 17 chr17 29002591 29003045 -56435435 + MLT1J LTR MaLR 1 509 -2 312 321 28 0 chr17 29003554 29003663 -56434817 - L1MC4 LINE L1 0 8042 7931 21 0 0 0 chr17 29003861 29003882 -56434598 + AT_rich Low_complexity Low_complexity 1 21 0 383 199 25 7 chr17 29003882 29004020 -56434460 - L1MB8 LINE L1 -341 5837 5695 377 250 11 22 chr17 29004068 29004160 -56434320 + MER58B DNA MER1_type 1 91 -250 2071 116 30 0 chr17 29004207 29004509 -56433971 + AluSx SINE Alu 1 311 -1 2462 141 25 0 chr17 29004518 29004923 -56433557 - L1MB3 LINE L1 -7 6176 5762 1154 165 93 0 chr17 29004923 29005159 -56433321 + MER58B DNA MER1_type 84 341 0 244 333 11 0 chr17 29005171 29005261 -56433219 - L1MB3 LINE L1 -526 5644 5554 1543 173 19 10 chr17 29005410 29005717 -56432763 + AluJo SINE Alu 1 310 -2 496 100 11 11 chr17 29006135 29006225 -56432255 + (TTCC)n Simple_repeat Simple_repeat 4 93 0 1717 179 3 0 chr17 29006252 29006548 -56431932 - AluJb SINE Alu -15 297 1 234 191 0 0 chr17 29006548 29006595 -56431885 + CT-rich Low_complexity Low_complexity 3 49 0 998 149 45 68 chr17 29006597 29006818 -56431662 - AluJo SINE Alu -13 299 84 341 282 12 12 chr17 29007948 29008033 -56430447 - L2 LINE L2 0 3272 3188 2092 119 0 0 chr17 29008300 29008594 -56429886 - AluSx SINE Alu -16 296 3 192 77 0 0 chr17 29009577 29009603 -56428877 + (TG)n Simple_repeat Simple_repeat 1 26 0 207 268 37 37 chr17 29009871 29009953 -56428527 - MIR SINE MIR -171 91 10 292 244 99 46 chr17 29010272 29010403 -56428077 - MIR SINE MIR -7 255 118 410 281 90 6 chr17 29011157 29011324 -56427156 + HERVI LTR ERV1 187 367 -6282 527 288 35 39 chr17 29011561 29011790 -56426690 + HERVI LTR ERV1 776 1003 -6782 2693 57 0 0 chr17 29012006 29012339 -56426141 - L1PA5 LINE L1 -3875 2271 1939 25552 42 2 6 chr17 29012339 29016245 -56422235 + L1PA5 LINE L1 2263 6154 0 831 310 63 28 chr17 29016245 29016861 -56421619 + HERVI LTR ERV1 1299 1936 -5849 488 194 108 23 chr17 29016862 29016991 -56421489 + LTR18B LTR ERVL 353 492 -122 1939 320 17 28 chr17 29017012 29017950 -56420530 + HERVI LTR ERV1 4829 5756 -2029 379 236 34 34 chr17 29018175 29018294 -56420186 + HERVI LTR ERV1 3035 4857 -1792 1651 307 59 40 chr17 29018670 29019420 -56419060 + HERVI LTR ERV1 5290 6024 -1761 2244 110 0 10 chr17 29019420 29019719 -56418761 - AluSx SINE Alu -16 296 1 1651 307 59 40 chr17 29019719 29020178 -56418302 + HERVI LTR ERV1 6024 7647 -138 280 333 18 35 chr17 29020808 29020922 -56417558 - MIR3 SINE MIR -48 160 49 966 235 28 5 chr17 29020942 29021155 -56417325 - MER20 DNA MER1_type -1 218 1 1560 136 86 76 chr17 29021180 29021482 -56416998 + AluSx SINE Alu 5 309 -3 1790 170 7 20 chr17 29022280 29022580 -56415900 - AluJo SINE Alu -16 296 1 233 344 76 23 chr17 29022583 29022714 -56415766 - MIR3 SINE MIR -67 141 4 234 128 0 0 chr17 29023426 29023465 -56415015 + (T)n Simple_repeat Simple_repeat 1 39 0 6630 25 0 0 chr17 29023487 29024284 -56414196 + L1PA2 LINE L1 5353 6149 -6 24 0 0 0 chr17 29024289 29024313 -56414167 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr17 29024373 29024395 -56414085 + AT_rich Low_complexity Low_complexity 1 22 0 2304 108 3 13 chr17 29024486 29024800 -56413680 - AluSx SINE Alu -1 311 1 942 232 176 49 chr17 29024800 29024990 -56413490 - L1MD2 LINE L1 -13 6346 6182 312 27 0 0 chr17 29024990 29025027 -56413453 + (TG)n Simple_repeat Simple_repeat 2 38 0 1482 112 182 8 chr17 29025027 29025269 -56413211 - AluSx SINE Alu -28 284 1 942 232 176 49 chr17 29025269 29025383 -56413097 - L1MD2 LINE L1 -176 6183 6002 222 367 28 10 chr17 29025781 29026031 -56412449 - L2 LINE L2 -466 2848 2554 525 254 61 23 chr17 29026394 29026620 -56411860 - MIR SINE MIR 0 262 30 778 37 9 9 chr17 29026802 29026909 -56411571 + (TCTA)n Simple_repeat Simple_repeat 2 108 0 292 162 0 54 chr17 29026946 29026987 -56411493 - MLT2B1 LTR ERVL 0 520 483 315 85 0 0 chr17 29026987 29027034 -56411446 + (TCTA)n Simple_repeat Simple_repeat 4 50 0 292 162 0 54 chr17 29027034 29027066 -56411414 - MLT2B1 LTR ERVL -37 483 451 * 2137 123 3 3 chr17 29027045 29027355 -56411125 - THE1B LTR MaLR -54 310 1 10304 97 28 38 chr17 29027355 29028950 -56409530 - THE1B-int LTR MaLR 0 1580 1 180 111 0 0 chr17 29028963 29028990 -56409490 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 276 30 0 0 chr17 29028992 29029025 -56409455 + (TTCCC)n Simple_repeat Simple_repeat 2 34 0 2246 130 0 3 chr17 29029033 29029341 -56409139 - AluSp SINE Alu -6 307 1 2532 102 3 3 chr17 29029342 29029694 -56408786 - THE1B LTR MaLR -12 352 1 196 175 32 0 chr17 29029695 29029758 -56408722 + (TCTA)n Simple_repeat Simple_repeat 4 68 0 1437 201 86 60 chr17 29029758 29029780 -56408700 - MLT2B1 LTR ERVL -40 480 460 1890 151 10 22 chr17 29029780 29030092 -56408388 - AluJo SINE Alu -4 308 1 1437 201 86 60 chr17 29030092 29030537 -56407943 - MLT2B1 LTR ERVL -60 460 1 582 250 7 9 chr17 29031311 29031456 -56407024 - MER5B DNA MER1_type -1 177 47 413 318 8 0 chr17 29031870 29031999 -56406481 - MIR SINE MIR -49 213 84 200 273 39 26 chr17 29032035 29032112 -56406368 - MIR SINE MIR -94 114 37 267 163 0 20 chr17 29032158 29032207 -56406273 - MER5B DNA MER1_type -16 162 115 1930 143 19 46 chr17 29032207 29032460 -56406020 + L1MB1 LINE L1 5338 5579 -589 2105 141 0 0 chr17 29032460 29032750 -56405730 + AluSg1 SINE Alu 3 292 -17 1930 143 19 46 chr17 29032750 29032867 -56405613 + L1MB1 LINE L1 5579 5698 -470 1603 138 39 116 chr17 29032867 29033044 -56405436 + THE1C LTR MaLR 1 131 -244 1902 121 67 11 chr17 29033044 29033326 -56405154 - AluSx SINE Alu -14 298 1 1603 138 39 116 chr17 29033326 29033554 -56404926 + THE1C LTR MaLR 131 375 0 9196 107 15 37 chr17 29033555 29034975 -56403505 - THE1C-int LTR MaLR -191 1389 1 1760 125 55 76 chr17 29034975 29035358 -56403122 - THE1C LTR MaLR 0 375 1 2073 152 25 98 chr17 29035358 29035418 -56403062 + L1MB1 LINE L1 5694 5757 -411 2530 165 7 2 chr17 29035418 29035842 -56402638 + MSTB LTR MaLR 1 426 0 2073 152 25 98 chr17 29035842 29036125 -56402355 + L1MB1 LINE L1 5757 5990 -178 2417 109 0 0 chr17 29036125 29036437 -56402043 + AluSx SINE Alu 1 312 0 2073 152 25 98 chr17 29036437 29036604 -56401876 + L1MB1 LINE L1 5990 6168 0 240 183 70 84 chr17 29036613 29036684 -56401796 - MER5B DNA MER1_type -48 130 61 385 327 142 4 chr17 29036739 29036965 -56401515 - MIR SINE MIR 0 262 6 205 330 50 10 chr17 29037098 29037198 -56401282 + L3 LINE CR1 1333 1436 -141 474 101 0 0 chr17 29038068 29038137 -56400343 + (TG)n Simple_repeat Simple_repeat 1 69 0 203 0 37 0 chr17 29038576 29038603 -56399877 + (GA)n Simple_repeat Simple_repeat 1 28 0 198 0 0 0 chr17 29038661 29038683 -56399797 + (A)n Simple_repeat Simple_repeat 1 22 0 252 288 56 24 chr17 29038712 29038837 -56399643 + MIR SINE MIR 120 248 -14 513 295 101 9 chr17 29040713 29040930 -56397550 - MIR SINE MIR -23 239 3 197 319 90 32 chr17 29041324 29041512 -56396968 - L2 LINE L2 -2782 532 334 204 125 0 0 chr17 29042232 29042264 -56396216 + (TCCC)n Simple_repeat Simple_repeat 3 34 0 2386 96 0 3 chr17 29042680 29042982 -56395498 + AluSx SINE Alu 1 301 -11 243 244 116 0 chr17 29042998 29043084 -56395396 - L2 LINE L2 -4 3309 3214 189 382 9 27 chr17 29043070 29043180 -56395300 + MIR SINE MIR 37 144 -118 * 288 0 0 0 chr17 29043787 29043819 -56394661 + (TG)n Simple_repeat Simple_repeat 2 33 0 204 111 0 0 chr17 29043835 29043871 -56394609 + (CA)n Simple_repeat Simple_repeat 2 37 0 711 156 45 96 chr17 29044570 29044769 -56393711 + MER53 DNA DNA 1 189 0 302 263 25 34 chr17 29045680 29045798 -56392682 - MIR SINE MIR -60 202 86 26 64 0 0 chr17 29045891 29045938 -56392542 + AT_rich Low_complexity Low_complexity 1 47 0 4451 165 25 21 chr17 29045938 29046130 -56392350 - L1PB4 LINE L1 -2 6154 5964 1978 132 36 7 chr17 29046130 29046411 -56392069 - AluSg SINE Alu -21 289 1 4451 165 25 21 chr17 29046411 29047053 -56391427 - L1PB4 LINE L1 -192 5964 5326 1953 172 3 0 chr17 29047053 29047349 -56391131 - AluJb SINE Alu -15 297 1 4451 165 25 21 chr17 29047349 29048137 -56390343 - L1PB4 LINE L1 -830 5326 4523 280 335 92 42 chr17 29048605 29048942 -56389538 + L2 LINE L2 2461 2814 -500 194 369 24 0 chr17 29049094 29049178 -56389302 + L2 LINE L2 2895 2980 -333 521 74 0 53 chr17 29049649 29049744 -56388736 - L1PA6 LINE L1 0 6154 6065 558 71 0 0 chr17 29049744 29049814 -56388666 - AluJ/FRAM SINE Alu -27 285 216 409 160 13 27 chr17 29049807 29049882 -56388598 - AluSc SINE Alu -127 182 109 * 453 297 121 62 chr17 29049884 29050207 -56388273 + L2 LINE L2 2970 3311 -2 301 252 44 117 chr17 29050549 29050755 -56387725 + MIR SINE MIR 66 256 -6 226 245 0 19 chr17 29050891 29050944 -56387536 + GA-rich Low_complexity Low_complexity 3 54 0 278 299 52 58 chr17 29051352 29051425 -56387055 - MER117 DNA MER1_type -44 153 81 2087 125 35 0 chr17 29051425 29051714 -56386766 - AluSx SINE Alu -13 299 1 278 299 52 58 chr17 29051714 29051794 -56386686 - MER117 DNA MER1_type -116 81 1 315 298 83 0 chr17 29051845 29051966 -56386514 - MIR SINE MIR -109 153 23 1328 87 3 9 chr17 29052304 29052534 -56385946 + (TTTC)n Simple_repeat Simple_repeat 1 231 -367 180 0 0 0 chr17 29052534 29052554 -56385926 + (TCCC)n Simple_repeat Simple_repeat 1 20 0 1328 87 3 9 chr17 29052554 29052727 -56385753 + (TTTC)n Simple_repeat Simple_repeat 231 598 0 186 133 0 0 chr17 29052745 29052775 -56385705 + (TTTC)n Simple_repeat Simple_repeat 4 33 0 2377 99 0 0 chr17 29052780 29053084 -56385396 - AluSc SINE Alu 0 309 6 371 198 58 12 chr17 29053130 29053216 -56385264 + L2 LINE L2 3177 3266 -6 1222 137 11 6 chr17 29054155 29054330 -56384150 - AluJb SINE Alu -136 176 1 319 345 27 0 chr17 29054482 29054592 -56383888 - MIR SINE MIR -50 212 100 541 250 23 52 chr17 29054632 29054795 -56383685 - MIR3 SINE MIR -11 197 38 2387 86 3 10 chr17 29054795 29055109 -56383371 + AluSx SINE Alu 1 312 0 207 100 0 0 chr17 29056463 29056493 -56381987 + (TTAA)n Simple_repeat Simple_repeat 4 33 0 369 323 30 15 chr17 29057315 29057448 -56381032 + MIR3 SINE MIR 30 164 -44 2144 188 12 60 chr17 29057470 29057635 -56380845 + MLT1D LTR MaLR 15 186 -319 2159 130 0 0 chr17 29057635 29057927 -56380553 + AluSx SINE Alu 1 292 -20 2144 188 12 60 chr17 29057927 29058277 -56380203 + MLT1D LTR MaLR 186 505 0 236 306 19 37 chr17 29058543 29058651 -56379829 - MIR SINE MIR -62 146 41 241 256 12 12 chr17 29059619 29059701 -56378779 + A-rich Low_complexity Low_complexity 3 84 0 307 290 155 25 chr17 29061299 29061499 -56376981 - MIR SINE MIR -12 250 25 220 227 227 0 chr17 29061884 29061950 -56376530 + MIR SINE MIR 63 143 -65 279 313 25 69 chr17 29064765 29064925 -56373555 + MER5B DNA MER1_type 25 177 -1 265 298 30 96 chr17 29065073 29065271 -56373209 + MIR3 SINE MIR 17 201 -7 375 268 6 22 chr17 29065757 29065936 -56372544 + (TG)n Simple_repeat Simple_repeat 1 176 0 207 0 0 0 chr17 29066270 29066293 -56372187 + (TC)n Simple_repeat Simple_repeat 2 24 0 215 158 0 18 chr17 29066314 29066371 -56372109 + GA-rich Low_complexity Low_complexity 1 56 0 448 267 46 0 chr17 29066727 29066858 -56371622 - MIR SINE MIR -66 196 60 282 309 24 24 chr17 29067378 29067501 -56370979 - MIR3 SINE MIR -2 206 84 501 302 24 0 chr17 29067802 29067971 -56370509 - MIR3 SINE MIR -7 201 29 234 325 60 0 chr17 29068628 29068745 -56369735 + L2 LINE L2 2583 2706 -608 640 229 19 25 chr17 29068748 29068905 -56369575 - MER3 DNA MER1_type -49 160 5 697 275 65 73 chr17 29069129 29069411 -56369069 - L2 LINE L2 0 3313 3033 828 176 0 0 chr17 29069411 29069542 -56368938 - FLAM_C SINE Alu -1 132 2 697 275 65 73 chr17 29069542 29069641 -56368839 - L2 LINE L2 -280 3033 2935 2408 88 0 10 chr17 29069680 29069988 -56368492 + AluY SINE Alu 1 305 -6 373 328 8 16 chr17 29070106 29070234 -56368246 + L2 LINE L2 3136 3262 -10 1888 159 169 12 chr17 29071055 29071458 -56367022 + MER31B LTR ERV1 1 466 0 286 318 0 24 chr17 29072121 29072247 -56366233 + CT-rich Low_complexity Low_complexity 1 123 0 282 295 85 35 chr17 29072794 29072994 -56365486 - MIR SINE MIR -33 229 20 1040 190 20 91 chr17 29073443 29073773 -56364707 - MLT1D LTR MaLR -50 455 146 287 266 83 0 chr17 29074046 29074155 -56364325 - MIR SINE MIR -122 140 23 826 156 8 0 chr17 29075028 29075156 -56363324 - FLAM_A SINE Alu -1 132 4 3824 213 27 23 chr17 29075595 29076584 -56361896 - L1ME2 LINE L1 0 6098 5109 1538 189 30 44 chr17 29076582 29076948 -56361532 - L1ME2 LINE L1 0 6164 5804 * 2957 242 55 45 chr17 29076945 29078915 -56359565 - L1ME2 LINE L1 -1947 4133 1705 2076 150 3 0 chr17 29078915 29079222 -56359258 - AluSx SINE Alu -4 308 1 2957 242 55 45 chr17 29079222 29079442 -56359038 - L1ME2 LINE L1 -4375 1705 1489 1623 142 29 46 chr17 29079462 29079570 -56358910 + AluJo SINE Alu 1 109 -203 7289 118 65 22 chr17 29079570 29080795 -56357685 + MER52C LTR ERV1 2 1278 0 1623 142 29 46 chr17 29080795 29080967 -56357513 + AluJo SINE Alu 109 276 -36 204 40 0 0 chr17 29080972 29080997 -56357483 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 1455 275 49 52 chr17 29081022 29082015 -56356465 - L1ME2 LINE L1 -4744 1517 528 749 279 130 43 chr17 29082189 29082634 -56355846 - L1ME2 LINE L1 -5577 493 10 375 234 29 38 chr17 29082679 29082797 -56355683 - MIR SINE MIR -64 144 46 1342 167 114 26 chr17 29082918 29083182 -56355298 - AluJo SINE Alu -25 287 1 472 219 17 25 chr17 29083299 29083418 -56355062 + MIR3 SINE MIR 82 199 -9 1130 87 50 0 chr17 29083426 29083587 -56354893 + L1PA14 LINE L1 5992 6160 -1 207 0 0 0 chr17 29083864 29083887 -56354593 + (T)n Simple_repeat Simple_repeat 1 23 0 287 301 44 18 chr17 29084052 29084165 -56354315 + L3 LINE CR1 1204 1319 -258 542 313 27 40 chr17 29084235 29084459 -56354021 + L3 LINE CR1 1330 1550 -27 211 193 0 140 chr17 29084551 29084642 -56353838 + MIR SINE MIR 66 145 -63 360 252 84 7 chr17 29084862 29085005 -56353475 - L2 LINE L2 -991 2323 2170 282 273 70 64 chr17 29085886 29086073 -56352407 + MIR SINE MIR 18 205 -57 250 279 13 13 chr17 29086269 29086348 -56352132 + CT-rich Low_complexity Low_complexity 5 83 0 230 301 55 0 chr17 29087443 29087516 -56350964 - L2 LINE L2 -37 3235 3159 532 253 27 7 chr17 29087625 29087775 -56350705 + MIR SINE MIR 72 224 -38 210 222 0 0 chr17 29087935 29087980 -56350500 + L2 LINE L2 3269 3313 0 611 191 0 0 chr17 29088064 29088158 -56350322 - L1M1 LINE L1 -7112 453 360 252 182 18 0 chr17 29088288 29088343 -56350137 + MIR SINE MIR 84 139 -69 247 222 0 16 chr17 29088859 29088922 -56349558 - MIR SINE MIR -50 212 151 748 271 24 5 chr17 29088962 29089169 -56349311 - MIR SINE MIR -4 258 48 330 273 147 33 chr17 29089345 29089403 -56349077 - MIR SINE MIR -58 204 154 2354 81 7 0 chr17 29089403 29089698 -56348782 - AluY SINE Alu -13 298 2 330 273 147 33 chr17 29089698 29089774 -56348706 - MIR SINE MIR -108 154 53 211 289 66 13 chr17 29089774 29089850 -56348630 + MIR3 SINE MIR 4 83 -125 243 113 0 113 chr17 29089956 29090018 -56348462 - MER117 DNA MER1_type -28 169 115 751 139 7 7 chr17 29090676 29090820 -56347660 + (TCCA)n Simple_repeat Simple_repeat 1 144 0 2025 123 41 0 chr17 29090842 29091135 -56347345 - AluSx SINE Alu -7 305 1 526 309 54 60 chr17 29091136 29091485 -56346995 - L2 LINE L2 -11 3261 2915 317 248 109 0 chr17 29092406 29092507 -56345973 + MER91C DNA MER1_type 1 112 -28 1942 152 7 3 chr17 29093817 29094114 -56344366 - AluJo SINE Alu -14 298 1 1288 202 79 66 chr17 29094398 29094779 -56343701 + MLT1B LTR MaLR 1 386 -4 259 289 13 0 chr17 29095033 29095109 -56343371 - MIR SINE MIR -110 152 76 288 275 60 74 chr17 29095794 29095859 -56342621 + MIR SINE MIR 116 180 -82 447 226 57 73 chr17 29095859 29096036 -56342444 + MER104 DNA MER2_type 4 177 -3 288 275 60 74 chr17 29096036 29096119 -56342361 + MIR SINE MIR 180 262 0 406 298 28 28 chr17 29096120 29096298 -56342182 + MIR SINE MIR 74 251 -11 478 327 51 0 chr17 29097367 29097523 -56340957 - MIR SINE MIR -94 168 5 315 342 27 0 chr17 29097682 29097793 -56340687 - MIR SINE MIR -65 143 30 449 312 91 20 chr17 29098050 29098249 -56340231 + MIR SINE MIR 34 246 -16 809 263 168 28 chr17 29099276 29099633 -56338847 + MLT1J2 LTR MaLR 44 450 0 213 306 42 0 chr17 29100019 29100091 -56338389 + L2 LINE L2 2595 2669 -645 291 251 66 109 chr17 29100772 29100955 -56337525 + MIR3 SINE MIR 33 207 -1 541 186 0 0 chr17 29102012 29102098 -56336382 - FRAM SINE Alu -38 138 53 453 266 70 13 chr17 29102315 29102357 -56336123 - MIR3 SINE MIR -1 207 169 464 244 28 40 chr17 29102357 29102533 -56335947 + MER5B DNA MER1_type 1 174 -4 453 266 70 13 chr17 29102533 29102648 -56335832 - MIR3 SINE MIR -39 169 41 213 94 0 0 chr17 29103473 29103505 -56334975 + (TG)n Simple_repeat Simple_repeat 2 33 0 342 289 59 40 chr17 29103596 29103748 -56334732 + MER5A DNA MER1_type 30 184 -5 233 247 86 0 chr17 29103831 29103912 -56334568 + MIR3 SINE MIR 98 185 -23 207 133 0 0 chr17 29104945 29104990 -56333490 + (CAAAAA)n Simple_repeat Simple_repeat 4 48 0 689 258 46 73 chr17 29105157 29105525 -56332955 + L1ME4a LINE L1 5558 5915 -206 38673 46 1 6 chr17 29105642 29111195 -56327285 - L1PA5 LINE L1 -9 6145 623 728 68 0 0 chr17 29111193 29111281 -56327199 - L1PA5 LINE L1 -6048 98 11 * 249 313 53 15 chr17 29111424 29111555 -56326925 + MIR SINE MIR 13 148 -114 1445 217 11 3 chr17 29111663 29111949 -56326531 - AluJo SINE Alu -24 288 1 542 155 0 10 chr17 29111951 29112054 -56326426 - FLAM_C SINE Alu -4 139 38 201 366 84 0 chr17 29112303 29112445 -56326035 - MIR SINE MIR -63 199 46 315 264 0 22 chr17 29113064 29113155 -56325325 - MIR3 SINE MIR -47 161 73 269 323 21 0 chr17 29113253 29113346 -56325134 - L2 LINE L2 -4 3309 3215 195 207 121 0 chr17 29113766 29113824 -56324656 - L2 LINE L2 -184 3088 3024 379 256 33 0 chr17 29114656 29114746 -56323734 - MER81 DNA DNA -17 97 5 1546 103 42 19 chr17 29114789 29115042 -56323438 + AluSp SINE Alu 64 321 0 6639 230 53 56 chr17 29115092 29116778 -56321702 - L1MEc LINE L1 -2758 3457 1767 337 107 0 173 chr17 29116778 29116816 -56321664 + MADE1 DNA Mariner 2 22 -58 2338 92 3 3 chr17 29116816 29117110 -56321370 - AluSc SINE Alu -15 294 1 337 107 0 173 chr17 29117110 29117146 -56321334 + MADE1 DNA Mariner 22 63 -17 6639 230 53 56 chr17 29117146 29118856 -56319624 - L1MEc LINE L1 -4448 1767 35 2516 70 0 0 chr17 29319837 29320138 -56118342 + AluY SINE Alu 1 301 -10 284 203 165 13 chr17 29320304 29320383 -56118097 + MIR SINE MIR 85 175 -87 1794 166 3 28 chr17 29320732 29321052 -56117428 + AluJb SINE Alu 1 312 0 333 167 0 17 chr17 29321320 29321380 -56117100 - AluSq SINE Alu -114 189 131 1342 239 92 82 chr17 29321390 29322055 -56116425 + L1MC4a LINE L1 5446 6121 -1687 1930 96 44 4 chr17 29322055 29322350 -56116130 - AluSx SINE Alu 0 306 1 1342 239 92 82 chr17 29322350 29322364 -56116116 + L1MC4a LINE L1 6121 6133 -1675 2077 114 59 0 chr17 29322582 29322872 -56115608 - AluSq SINE Alu -6 307 1 497 220 76 8 chr17 29323223 29323341 -56115139 - FRAM SINE Alu -22 154 29 2312 119 0 0 chr17 29323450 29323762 -56114718 + AluSx SINE Alu 1 312 0 309 297 32 0 chr17 29323762 29323903 -56114577 + MIR SINE MIR 38 182 -75 184 295 23 93 chr17 29324096 29324225 -56114255 - MIR SINE MIR -67 195 76 733 162 24 72 chr17 29324392 29324535 -56113945 + L1MB7 LINE L1 6017 6156 -28 1789 157 25 4 chr17 29324535 29324844 -56113636 + AluSx SINE Alu 1 315 0 733 162 24 72 chr17 29324844 29324864 -56113616 + L1MB7 LINE L1 6156 6175 -9 462 249 50 39 chr17 29324993 29325174 -56113306 + L1ME3A LINE L1 5988 6170 0 2539 193 67 33 chr17 29325202 29325385 -56113095 + MLT1E LTR MaLR 1 176 -417 2255 87 7 17 chr17 29325385 29325685 -56112795 + AluSq SINE Alu 1 297 -16 2539 193 67 33 chr17 29325685 29326070 -56112410 + MLT1E LTR MaLR 176 588 -5 2017 180 49 26 chr17 29326081 29326618 -56111862 - MER77 LTR ERV1 -4 601 1 836 136 0 0 chr17 29326647 29326765 -56111715 + FLAM_C SINE Alu 1 118 -25 1875 104 12 0 chr17 29327467 29327717 -56110763 - AluSq SINE Alu -60 253 1 268 289 0 8 chr17 29327765 29327893 -56110587 - L1M4 LINE L1 -832 5314 5188 2094 127 3 7 chr17 29327938 29328237 -56110243 - AluSp SINE Alu -15 298 1 840 192 0 0 chr17 29328245 29328370 -56110110 - FLAM_C SINE Alu -17 126 2 519 226 91 85 chr17 29328375 29328470 -56110010 - AluJo SINE Alu -12 300 207 1456 165 0 4 chr17 29328470 29328707 -56109773 - AluJb SINE Alu -13 299 64 519 226 91 85 chr17 29328707 29328810 -56109670 - AluJo SINE Alu -105 207 101 2120 105 0 38 chr17 29329029 29329374 -56109106 - AluSx SINE Alu 0 312 1 680 195 8 23 chr17 29329379 29329507 -56108973 - FLAM_C SINE Alu -16 127 2 180 0 0 0 chr17 29329806 29329826 -56108654 + (TTAA)n Simple_repeat Simple_repeat 3 22 0 1784 142 39 3 chr17 29329826 29330108 -56108372 - AluJb SINE Alu -20 292 1 384 147 0 40 chr17 29330192 29330267 -56108213 - L1MB2 LINE L1 0 6171 6100 1954 133 0 23 chr17 29330268 29330570 -56107910 + AluSx SINE Alu 4 298 -14 756 173 0 24 chr17 29330570 29330697 -56107783 - FLAM_A SINE Alu -8 125 2 1334 161 22 0 chr17 29330697 29330920 -56107560 - L1MB2 LINE L1 -119 6052 5825 2134 95 14 17 chr17 29330925 29331093 -56107387 - AluSx SINE Alu -17 295 127 207 0 0 0 chr17 29331093 29331116 -56107364 + (TG)n Simple_repeat Simple_repeat 2 24 0 2134 95 14 17 chr17 29331116 29331241 -56107239 - AluSx SINE Alu -185 127 3 2272 108 3 0 chr17 29331255 29331552 -56106928 - AluSg SINE Alu -10 300 3 1847 143 7 27 chr17 29332089 29332390 -56106090 - AluSx SINE Alu -17 295 1 937 236 107 18 chr17 29332617 29332943 -56105537 - MER96B DNA MER1_type? -52 365 11 229 266 76 0 chr17 29333258 29333337 -56105143 + L2 LINE L2 1705 1789 -1525 243 291 64 9 chr17 29333386 29333496 -56104984 - L1MC5 LINE L1 -535 7426 7311 * 273 304 10 10 chr17 29333480 29333582 -56104898 - L1MC4 LINE L1 -547 7495 7394 2252 75 4 0 chr17 29333735 29334048 -56104432 - AluSc SINE Alu 0 314 1 759 90 4 225 chr17 29334186 29334274 -56104206 - L1MD3 LINE L1 -2 7993 7887 1612 159 4 4 chr17 29334274 29334531 -56103949 - AluJo SINE Alu -55 257 1 759 90 4 225 chr17 29334531 29334563 -56103917 - L1MD3 LINE L1 -108 7887 7850 2141 136 10 0 chr17 29334563 29334872 -56103608 - AluSx SINE Alu 0 312 1 2220 132 3 0 chr17 29334872 29335183 -56103297 - AluSx SINE Alu 0 312 1 759 90 4 225 chr17 29335183 29335304 -56103176 - L1MD3 LINE L1 -143 7852 7804 1211 101 6 0 chr17 29335362 29335531 -56102949 - L1MB3 LINE L1 0 6183 6014 320 128 0 0 chr17 29335593 29335640 -56102840 + Alu SINE Alu 1 47 -255 180 111 0 0 chr17 29335764 29335791 -56102689 + (TATATG)n Simple_repeat Simple_repeat 4 30 0 324 0 0 0 chr17 29336158 29336194 -56102286 + (TA)n Simple_repeat Simple_repeat 2 37 0 1880 171 0 13 chr17 29336194 29336510 -56101970 - AluSp SINE Alu -1 312 1 22 0 0 0 chr17 29336556 29336578 -56101902 + AT_rich Low_complexity Low_complexity 1 22 0 338 126 6 45 chr17 29336717 29336788 -56101692 + FAM SINE Alu 27 91 -84 290 299 45 73 chr17 29337485 29337662 -56100818 - MIR3 SINE MIR 0 208 37 2156 112 3 0 chr17 29337787 29338081 -56100399 - AluSc SINE Alu -14 295 1 253 229 72 36 chr17 29338932 29339015 -56099465 - MIR SINE MIR -4 258 173 723 289 22 30 chr17 29339043 29339275 -56099205 + MIR SINE MIR 33 262 0 374 248 184 24 chr17 29339289 29339414 -56099066 - MIR SINE MIR -105 157 13 2237 85 16 13 chr17 29339726 29340031 -56098449 + AluSg SINE Alu 1 306 -4 1196 81 0 0 chr17 29340297 29340446 -56098034 + AluSc SINE Alu 3 151 -158 1856 159 3 3 chr17 29340886 29341176 -56097304 - AluSx SINE Alu -22 290 1 2282 171 63 8 chr17 29341425 29341875 -56096605 - MLT1D LTR MaLR 0 505 41 2102 71 0 99 chr17 29343167 29343490 -56094990 + AluSc SINE Alu 1 291 -18 349 233 27 0 chr17 29343658 29343731 -56094749 + MIR SINE MIR 23 97 -165 2360 69 0 30 chr17 29344006 29344311 -56094169 - AluY SINE Alu -15 296 1 955 303 52 26 chr17 29345102 29345488 -56092992 + MLT1J2 LTR MaLR 55 450 0 352 326 23 125 chr17 29345629 29345876 -56092604 + L2 LINE L2 2906 3100 -172 2134 119 0 10 chr17 29345876 29346171 -56092309 - AluSc SINE Alu -17 292 1 352 326 23 125 chr17 29346171 29346316 -56092164 + L2 LINE L2 3100 3258 -14 182 250 23 0 chr17 29346678 29346722 -56091758 + L2 LINE L2 3255 3299 -14 731 58 0 0 chr17 29346929 29347015 -56091465 + AluS SINE Alu 2 87 -226 440 292 7 14 chr17 29347016 29347160 -56091320 - MIR SINE MIR -110 152 10 248 226 48 0 chr17 29347244 29347306 -56091174 - LTR67 LTR ERVL 0 557 493 337 171 0 0 chr17 29347405 29347472 -56091008 + L1MA9 LINE L1 6059 6125 -166 438 20 0 0 chr17 29347488 29347539 -56090941 + (GA)n Simple_repeat Simple_repeat 2 52 0 2277 106 0 0 chr17 29347659 29347960 -56090520 - AluSx SINE Alu -11 301 1 439 230 31 123 chr17 29347967 29348228 -56090252 - LTR67 LTR ERVL -318 239 3 300 200 0 0 chr17 29349059 29349114 -56089366 + MER5B DNA MER1_type 1 55 -123 225 119 0 0 chr17 29349598 29349640 -56088840 + (CA)n Simple_repeat Simple_repeat 2 43 0 2348 80 10 0 chr17 29349719 29350021 -56088459 - AluSq SINE Alu -8 305 1 1993 114 24 0 chr17 29350737 29351026 -56087454 - AluY SINE Alu -15 296 1 4093 113 7 42 chr17 29351321 29352271 -56086209 - L1PB4 LINE L1 0 6156 5254 1895 151 0 27 chr17 29352302 29352601 -56085879 - AluJb SINE Alu -21 291 1 29 28 0 0 chr17 29352601 29352637 -56085843 + AT_rich Low_complexity Low_complexity 1 36 0 2304 140 9 6 chr17 29353748 29354084 -56084396 - MER1B DNA MER1_type 0 337 1 1082 197 38 50 chr17 29354218 29354457 -56084023 + MIR SINE MIR 8 243 -19 191 35 0 35 chr17 29354499 29354528 -56083952 + (TTTTTG)n Simple_repeat Simple_repeat 3 30 0 1475 236 89 114 chr17 29355531 29355755 -56082725 - HAL1 LINE L1 0 2507 2279 2221 124 0 0 chr17 29355755 29356054 -56082426 - AluSx SINE Alu -13 299 1 1475 236 89 114 chr17 29356054 29356131 -56082349 - HAL1 LINE L1 -228 2279 2202 1606 174 7 44 chr17 29356131 29356424 -56082056 - AluJo SINE Alu -30 282 1 1475 236 89 114 chr17 29356424 29357130 -56081350 - HAL1 LINE L1 -305 2202 1524 501 145 0 103 chr17 29357137 29357254 -56081226 - Charlie5 DNA MER1_type -29 2583 2479 675 168 9 0 chr17 29357255 29357362 -56081118 + FLAM_A SINE Alu 2 109 -33 522 181 51 134 chr17 29357422 29357676 -56080804 - MER33 DNA MER1_type -249 75 1 604 179 26 22 chr17 29357745 29357882 -56080598 - L1M4 LINE L1 -676 5475 5357 497 246 8 31 chr17 29358766 29358896 -56079584 - MLT1K LTR MaLR -15 573 447 2314 78 0 32 chr17 29359408 29359717 -56078763 - AluY SINE Alu -12 299 1 28 79 0 0 chr17 29359853 29359916 -56078564 + AT_rich Low_complexity Low_complexity 1 63 0 264 59 0 0 chr17 29360238 29360272 -56078208 + (TG)n Simple_repeat Simple_repeat 1 34 0 234 146 0 42 chr17 29360275 29360323 -56078157 + L1MC4 LINE L1 6658 6703 -1339 222 264 138 23 chr17 29361427 29361514 -56076966 - L2 LINE L2 -8 3305 3209 199 143 184 0 chr17 29361771 29361820 -56076660 - L2 LINE L2 -8 3305 3248 240 308 162 0 chr17 29361965 29362082 -56076398 - MIR SINE MIR -79 183 48 381 250 191 18 chr17 29362160 29362328 -56076152 - MIR SINE MIR 0 262 66 2276 105 3 10 chr17 29363224 29363538 -56074942 + AluSq SINE Alu 2 313 0 3398 107 97 16 chr17 29363744 29364231 -56074249 - MER1A DNA MER1_type 0 527 2 2200 114 3 0 chr17 29364485 29364775 -56073705 + AluSp SINE Alu 1 291 -22 180 111 0 0 chr17 29364848 29364875 -56073605 + (TATATG)n Simple_repeat Simple_repeat 4 30 0 5463 81 33 11 chr17 29364928 29365721 -56072759 - SVA Other Other -520 866 57 297 0 0 0 chr17 29365721 29365754 -56072726 + (GGGAGA)n Simple_repeat Simple_repeat 5 37 0 5384 139 43 9 chr17 29365776 29367076 -56071404 - L1M1 LINE L1 -5272 2293 11 484 164 11 8 chr17 29367118 29367212 -56071268 - L1MB3 LINE L1 -47 6136 6049 2590 150 47 7 chr17 29367240 29367687 -56070793 - L1MB2 LINE L1 -110 6061 5597 710 115 10 0 chr17 29367721 29367825 -56070655 - AluSg/x SINE Alu -7 305 201 1753 105 0 0 chr17 29367925 29368173 -56070307 - AluSq SINE Alu -11 302 55 2065 112 7 0 chr17 29369817 29370111 -56068369 - AluSx SINE Alu -16 296 1 24 0 0 0 chr17 29370162 29370186 -56068294 + AT_rich Low_complexity Low_complexity 1 24 0 324 266 63 0 chr17 29370197 29370276 -56068204 + L1MC4 LINE L1 6619 6702 -1340 1028 130 57 0 chr17 29370276 29370453 -56068027 - AluSq SINE Alu -7 306 120 28 29 0 0 chr17 29370626 29370661 -56067819 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr17 29371075 29371096 -56067384 + AT_rich Low_complexity Low_complexity 1 21 0 529 230 61 70 chr17 29371357 29371493 -56066987 + MER2 DNA MER2_type 1 136 -209 1307 185 141 22 chr17 29371493 29371763 -56066717 - AluJo SINE Alu 0 302 1 529 230 61 70 chr17 29371763 29371839 -56066641 + MER2 DNA MER2_type 136 211 -134 2028 35 4 23 chr17 29372043 29372302 -56066178 + SVA Other Other 1133 1386 0 974 172 91 10 chr17 29372340 29372549 -56065931 + AluJo SINE Alu 82 307 -5 702 265 53 71 chr17 29372568 29373017 -56065463 + L1M4 LINE L1 4177 4617 -1529 778 164 0 0 chr17 29373028 29373144 -56065336 - AluJb SINE Alu -25 287 172 2057 120 10 0 chr17 29373222 29373531 -56064949 - AluSx SINE Alu 0 312 1 687 85 0 21 chr17 29374072 29374166 -56064314 + AluS SINE Alu 2 93 -219 1573 115 58 0 chr17 29374171 29374414 -56064066 - AluSq SINE Alu -56 257 1 917 124 13 20 chr17 29374536 29374689 -56063791 - AluSx SINE Alu -159 153 2 196 374 0 12 chr17 29374782 29374865 -56063615 + MIR SINE MIR 92 173 -89 1053 208 33 0 chr17 29375279 29375491 -56062989 - MER20 DNA MER1_type 0 219 1 562 240 23 8 chr17 29376480 29376609 -56061871 + MER5A DNA MER1_type 37 167 -22 230 333 82 34 chr17 29376964 29377111 -56061369 + L2 LINE L2 3160 3313 0 2062 102 0 0 chr17 29377115 29377439 -56061041 + AluY SINE Alu 1 324 0 185 255 59 0 chr17 29377634 29377685 -56060795 + MER5C DNA MER1_type 87 140 -184 781 219 59 16 chr17 29378097 29378284 -56060196 - MER58C DNA MER1_type -10 205 11 279 297 0 68 chr17 29378462 29378580 -56059900 - MIR3 SINE MIR -3 205 96 705 208 0 0 chr17 29378839 29379067 -56059413 + (CA)n Simple_repeat Simple_repeat 1 228 0 276 30 0 0 chr17 29379332 29379365 -56059115 + (TTTAA)n Simple_repeat Simple_repeat 3 35 0 683 183 9 0 chr17 29379367 29379482 -56058998 - FLAM_C SINE Alu -17 116 1 258 242 121 81 chr17 29379482 29379631 -56058849 - L1ME3 LINE L1 -47 6115 5961 1943 145 0 0 chr17 29379662 29379959 -56058521 + AluSq SINE Alu 1 297 -16 1403 119 0 0 chr17 29379959 29380153 -56058327 - AluSq SINE Alu -114 199 6 344 288 213 57 chr17 29380304 29380867 -56057613 + L1MC4a LINE L1 5284 5934 -1874 312 286 37 74 chr17 29380901 29381054 -56057426 + L1ME4a LINE L1 5939 6085 -36 1699 177 3 13 chr17 29381054 29381364 -56057116 + AluJb SINE Alu 1 307 -5 312 286 37 74 chr17 29381364 29381399 -56057081 + L1ME4a LINE L1 6085 6120 -1 194 91 30 0 chr17 29382272 29382305 -56056175 + A-rich Low_complexity Low_complexity 5 38 0 882 222 102 0 chr17 29382669 29382894 -56055586 - MIR SINE MIR -2 260 13 1974 87 50 43 chr17 29382951 29383251 -56055229 + AluSp SINE Alu 1 302 -11 1318 142 5 0 chr17 29387585 29387789 -56050691 - AluJo SINE Alu -107 205 1 1213 181 9 22 chr17 29387794 29388021 -56050459 + MLT1F1 LTR MaLR 344 567 0 510 277 47 0 chr17 29388042 29388190 -56050290 - L3 LINE CR1 -187 1390 1236 348 302 131 48 chr17 29388196 29388487 -56049993 - L2 LINE L2 -5 3267 2953 497 346 87 11 chr17 29388522 29388877 -56049603 - L3 LINE CR1 -354 1223 842 500 318 109 14 chr17 29389520 29389731 -56048749 - L2 LINE L2 -1 3271 3041 476 261 19 50 chr17 29389759 29389920 -56048560 - MIR SINE MIR 0 262 107 1608 178 7 3 chr17 29389930 29390222 -56048258 + AluJb SINE Alu 5 297 -15 1841 143 7 0 chr17 29390224 29390511 -56047969 + AluSx SINE Alu 1 289 -23 198 0 0 0 chr17 29390518 29390540 -56047940 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 340 198 43 58 chr17 29390629 29390723 -56047757 + MER91B DNA MER1_type 1 91 -49 306 314 29 0 chr17 29390861 29390963 -56047517 - LTR67 LTR ERVL -51 506 402 693 288 89 8 chr17 29391343 29391579 -56046901 - MIR SINE MIR 0 262 8 207 146 0 0 chr17 29392339 29392380 -56046100 + (A)n Simple_repeat Simple_repeat 1 41 0 193 29 59 0 chr17 29392628 29392662 -56045818 + (TA)n Simple_repeat Simple_repeat 1 36 0 1603 160 25 0 chr17 29392663 29392945 -56045535 - AluJo SINE Alu -23 289 1 262 313 83 10 chr17 29393185 29393281 -56045199 + MIR SINE MIR 48 150 -58 563 232 36 7 chr17 29393730 29393868 -56044612 - MIR SINE MIR -86 176 35 2185 110 3 0 chr17 29394245 29394553 -56043927 - AluSx SINE Alu -3 309 1 324 0 0 0 chr17 29394756 29394792 -56043688 + (T)n Simple_repeat Simple_repeat 1 36 0 322 51 0 0 chr17 29394792 29394831 -56043649 - MER57B LTR ERV1 -66 368 330 490 269 139 66 chr17 29394893 29395265 -56043215 + LTR16A1 LTR ERVL 74 452 -5 436 323 0 12 chr17 29395608 29395772 -56042708 + (CA)n Simple_repeat Simple_repeat 2 163 0 1917 145 0 0 chr17 29396166 29396484 -56041996 - AluSx SINE Alu 0 318 1 322 341 61 8 chr17 29396880 29397012 -56041468 - MIR SINE MIR -29 233 95 1837 117 4 4 chr17 29397114 29397387 -56041093 + AluSp SINE Alu 37 309 -4 811 266 42 21 chr17 29397565 29397806 -56040674 - MIR SINE MIR -1 261 16 255 294 37 37 chr17 29398184 29398320 -56040160 + LTR67 LTR ERVL 410 545 -12 1885 146 0 0 chr17 29398747 29399034 -56039446 + AluSx SINE Alu 24 310 -2 1354 145 45 55 chr17 29399890 29400179 -56038301 + AluJb SINE Alu 12 297 -15 2079 149 79 28 chr17 29400207 29400635 -56037845 - L1MB8 LINE L1 -6 6172 5723 2716 171 21 58 chr17 29400737 29400819 -56037661 - L1MB8 LINE L1 -743 5403 5320 2159 92 0 0 chr17 29400819 29401122 -56037358 - AluSx SINE Alu 0 303 1 1784 147 7 3 chr17 29401132 29401417 -56037063 - AluSx SINE Alu -26 286 1 2716 171 21 58 chr17 29401417 29401939 -56036541 - L1MB8 LINE L1 -835 5311 4810 1971 142 0 3 chr17 29401939 29402250 -56036230 - AluSx SINE Alu -2 310 1 2716 171 21 58 chr17 29402250 29402289 -56036191 - L1MB8 LINE L1 -1336 4810 4771 2377 82 0 0 chr17 29402297 29402603 -56035877 - AluY SINE Alu -5 306 1 545 310 7 0 chr17 29402779 29402924 -56035556 + Charlie7 DNA MER1_type 228 373 -2239 * 1291 205 91 86 chr17 29402920 29403177 -56035303 + Charlie7 DNA MER1_type 1644 1898 -714 2148 97 6 6 chr17 29403177 29403488 -56034992 + AluY SINE Alu 1 311 0 1291 205 91 86 chr17 29403488 29403721 -56034759 + Charlie7 DNA MER1_type 1898 2140 -472 2075 104 0 16 chr17 29403721 29404029 -56034451 + AluSx SINE Alu 1 303 -9 1291 205 91 86 chr17 29404029 29404122 -56034358 + Charlie7 DNA MER1_type 2140 2231 -381 905 181 0 0 chr17 29404129 29404312 -56034168 + AluSg/x SINE Alu 130 312 0 2208 100 0 3 chr17 29404369 29404668 -56033812 + AluSx SINE Alu 1 298 -14 1079 124 6 0 chr17 29404668 29404829 -56033651 + AluSg/x SINE Alu 134 295 -17 34 65 0 0 chr17 29404870 29404932 -56033548 + AT_rich Low_complexity Low_complexity 1 62 0 24 67 0 0 chr17 29404980 29405025 -56033455 + AT_rich Low_complexity Low_complexity 1 45 0 26 0 0 0 chr17 29405089 29405115 -56033365 + AT_rich Low_complexity Low_complexity 1 26 0 638 292 42 25 chr17 29405293 29405529 -56032951 + MIR SINE MIR 9 248 -14 2162 115 3 0 chr17 29406008 29406312 -56032168 + AluSq SINE Alu 1 305 -8 1716 179 17 0 chr17 29406385 29406681 -56031799 + AluSx SINE Alu 10 310 -2 550 236 36 30 chr17 29407075 29407240 -56031240 - MLT1J LTR MaLR -4 507 342 292 274 14 0 chr17 29407332 29407405 -56031075 - ERVL LTR ERVL -1490 4274 4201 614 231 13 64 chr17 29407465 29407621 -56030859 - ERVL LTR ERVL -2739 2257 2110 485 194 117 0 chr17 29407650 29407753 -56030727 - ERVL LTR ERVL -3194 1802 1688 791 293 95 11 chr17 29407782 29408065 -56030415 - ERVL LTR ERVL -3442 1554 1248 2529 288 55 39 chr17 29408103 29408406 -56030074 - ERVL LTR ERVL -3824 1172 875 2162 75 3 20 chr17 29408406 29408700 -56029780 - AluY SINE Alu -22 289 1 2529 288 55 39 chr17 29408700 29409500 -56028980 - ERVL LTR ERVL -4121 875 51 1653 176 3 0 chr17 29409536 29409825 -56028655 - AluJb SINE Alu -22 290 1 541 244 166 28 chr17 29409843 29410135 -56028345 - LTR16A LTR ERVL -72 378 34 1573 145 17 54 chr17 29410226 29410558 -56027922 - AluJb SINE Alu 0 321 1 968 262 44 0 chr17 29410766 29410991 -56027489 + Charlie8 DNA MER1_type 10 244 -2173 1813 122 7 43 chr17 29411073 29411376 -56027104 - AluSx SINE Alu -20 292 1 1766 159 3 16 chr17 29411463 29411771 -56026709 - AluJb SINE Alu -8 304 1 1504 157 17 34 chr17 29412693 29412987 -56025493 + AluJo SINE Alu 7 295 -17 2304 81 3 0 chr17 29413042 29413340 -56025140 + AluSg SINE Alu 1 299 -11 241 333 30 0 chr17 29413513 29413579 -56024901 + MIR SINE MIR 35 102 -160 287 336 0 0 chr17 29414541 29414654 -56023826 + C-rich Low_complexity Low_complexity 1 113 0 201 302 21 10 chr17 29414685 29414781 -56023699 + C-rich Low_complexity Low_complexity 5 101 0 246 62 0 0 chr17 29414961 29414993 -56023487 + (GGGAA)n Simple_repeat Simple_repeat 2 33 0 34 55 0 0 chr17 29416535 29416590 -56021890 + AT_rich Low_complexity Low_complexity 1 55 0 2541 72 0 3 chr17 29416660 29416964 -56021516 + AluSx SINE Alu 1 303 -9 218 396 51 9 chr17 29417412 29417629 -56020851 - L2 LINE L2 -237 3035 2810 276 331 52 26 chr17 29417664 29417818 -56020662 - MIR3 SINE MIR 0 208 51 2280 99 3 7 chr17 29418265 29418567 -56019913 + AluSc SINE Alu 1 301 -8 26 30 0 0 chr17 29418567 29418600 -56019880 + AT_rich Low_complexity Low_complexity 1 33 0 259 122 0 0 chr17 29418624 29418665 -56019815 + U6 snRNA snRNA 1 41 -66 21 36 0 0 chr17 29419098 29419126 -56019354 + AT_rich Low_complexity Low_complexity 1 28 0 2399 83 0 3 chr17 29419273 29419574 -56018906 + AluSq SINE Alu 1 300 -13 2560 47 3 0 chr17 29420606 29420902 -56017578 - AluY SINE Alu -14 297 1 265 238 119 27 chr17 29421059 29421163 -56017317 + HAL1b LINE L1 910 1003 -345 2620 47 3 0 chr17 29421163 29421461 -56017019 + AluSp SINE Alu 1 299 -14 265 238 119 27 chr17 29421461 29421541 -56016939 + HAL1b LINE L1 1003 1111 -237 2289 73 17 0 chr17 29422999 29423286 -56015194 - AluSx SINE Alu -20 292 1 1826 134 34 14 chr17 29423499 29423791 -56014689 + AluJb SINE Alu 1 298 -14 1712 185 127 33 chr17 29423936 29424051 -56014429 + MLT1C LTR MaLR 1 104 -363 2483 65 3 3 chr17 29424051 29424361 -56014119 + AluY SINE Alu 1 310 -1 1712 185 127 33 chr17 29424361 29424672 -56013808 + MLT1C LTR MaLR 104 467 0 581 249 104 0 chr17 29424734 29424907 -56013573 + MIR SINE MIR 66 256 -6 1733 187 0 16 chr17 29425279 29425584 -56012896 + AluJb SINE Alu 1 300 -12 372 314 64 28 chr17 29425696 29425979 -56012501 - L2 LINE L2 -978 2336 2044 2397 92 3 0 chr17 29425984 29426289 -56012191 + AluSq SINE Alu 1 306 -7 706 235 36 0 chr17 29426329 29426495 -56011985 + L1ME3A LINE L1 5518 5689 -481 300 239 0 0 chr17 29426512 29426579 -56011901 + MER116 DNA Mariner 14 80 0 258 159 0 0 chr17 29426580 29426624 -56011856 + L1ME3A LINE L1 5688 5731 -439 881 204 159 29 chr17 29426649 29426742 -56011738 + L1ME3A LINE L1 5819 5899 -271 2018 114 10 23 chr17 29426742 29427041 -56011439 + AluSq SINE Alu 1 295 -18 881 204 159 29 chr17 29427041 29427255 -56011225 + L1ME3A LINE L1 5899 6166 -4 1641 170 3 66 chr17 29427277 29427419 -56011061 + AluJo SINE Alu 5 154 -158 2508 75 0 3 chr17 29427419 29427727 -56010753 + AluY SINE Alu 1 307 -4 1641 170 3 66 chr17 29427727 29427801 -56010679 + AluJo SINE Alu 154 197 -115 2568 53 0 0 chr17 29427801 29428102 -56010378 - AluY SINE Alu -10 301 1 1641 170 3 66 chr17 29428102 29428202 -56010278 + AluJo SINE Alu 197 302 -10 2143 145 3 0 chr17 29428211 29428522 -56009958 + AluSx SINE Alu 1 312 0 2300 88 0 7 chr17 29429080 29429375 -56009105 - AluSg SINE Alu -17 293 1 2346 114 0 0 chr17 29429429 29429736 -56008744 + AluSx SINE Alu 1 307 -5 828 173 0 0 chr17 29429862 29429989 -56008491 - AluJb SINE Alu -185 127 1 1291 131 14 102 chr17 29430336 29430454 -56008026 - L1MB5 LINE L1 -1 6173 6046 2276 104 10 0 chr17 29430454 29430752 -56007728 - AluSx SINE Alu -11 301 1 1291 131 14 102 chr17 29430752 29430916 -56007564 - L1MB5 LINE L1 -128 6046 5916 1969 150 11 0 chr17 29431125 29431411 -56007069 - AluSx SINE Alu -23 289 1 1157 241 79 48 chr17 29431583 29431977 -56006503 + L2 LINE L2 2906 3311 -2 466 235 163 6 chr17 29432229 29432395 -56006085 - L2 LINE L2 -1 3312 3121 1865 106 0 44 chr17 29432400 29432674 -56005806 - AluSx SINE Alu -2 310 49 2006 138 7 0 chr17 29432677 29432959 -56005521 + AluSx SINE Alu 16 299 -13 233 136 212 0 chr17 29432967 29433033 -56005447 + MER116 DNA Mariner 1 80 0 631 219 92 88 chr17 29433034 29433285 -56005195 + MIR SINE MIR 11 262 0 2321 118 0 0 chr17 29433379 29433685 -56004795 - AluSx SINE Alu -6 306 1 1338 178 0 0 chr17 29434126 29434339 -56004141 - AluJb SINE Alu -15 297 85 256 133 0 0 chr17 29434345 29434390 -56004090 + L1MB4 LINE L1 6029 6073 -107 511 179 72 0 chr17 29434399 29434561 -56003919 + L1MA9 LINE L1 6021 6290 -22 360 107 23 199 chr17 29434574 29434663 -56003817 + L1MB4 LINE L1 6067 6127 -53 1668 181 0 27 chr17 29434663 29434961 -56003519 + AluJo SINE Alu 5 294 -18 360 107 23 199 chr17 29434961 29435002 -56003478 + L1MB4 LINE L1 6127 6174 -6 261 57 0 0 chr17 29435019 29435054 -56003426 + (T)n Simple_repeat Simple_repeat 1 35 0 381 268 89 30 chr17 29435148 29435365 -56003115 + MIR SINE MIR 28 262 0 369 162 0 0 chr17 29435385 29435453 -56003027 + A-rich Low_complexity Low_complexity 1 68 0 2641 55 0 6 chr17 29435654 29435966 -56002514 - AluY SINE Alu -1 310 1 384 300 22 56 chr17 29436592 29436772 -56001708 - MIR SINE MIR -85 177 4 188 225 28 28 chr17 29437425 29437496 -56000984 - L2 LINE L2 -181 3091 3021 496 295 10 50 chr17 29437541 29437741 -56000739 - MIR SINE MIR -51 211 20 270 205 26 26 chr17 29439059 29439137 -55999343 - MIR SINE MIR -118 144 67 2203 101 3 23 chr17 29439185 29439491 -55998989 - AluSx SINE Alu -12 300 1 265 208 0 65 chr17 29439495 29439572 -55998908 + MIR SINE MIR 66 137 -125 2378 90 3 13 chr17 29439614 29439924 -55998556 - AluSq SINE Alu -6 307 1 1956 154 7 0 chr17 29440014 29440306 -55998174 + AluJb SINE Alu 4 297 -15 334 138 0 250 chr17 29440548 29440708 -55997772 - L2 LINE L2 -17 3255 3136 2358 93 3 37 chr17 29440780 29441103 -55997377 - AluSq SINE Alu 0 313 2 2355 82 0 16 chr17 29441104 29441407 -55997073 - AluSx SINE Alu -10 302 5 396 69 0 42 chr17 29441425 29441497 -55996983 + (TTC)n Simple_repeat Simple_repeat 2 70 0 1247 135 0 35 chr17 29441500 29441683 -55996797 - AluSg/x SINE Alu 0 312 135 1648 134 112 7 chr17 29441683 29441952 -55996528 - AluSx SINE Alu -15 297 1 1247 135 0 35 chr17 29441952 29441968 -55996512 - AluSg/x SINE Alu -177 135 120 188 266 31 31 chr17 29441979 29442043 -55996437 - MIR SINE MIR -168 94 31 669 221 43 0 chr17 29442355 29442495 -55995985 + MIR SINE MIR 9 154 -108 323 222 148 62 chr17 29442984 29443146 -55995334 + MIR3 SINE MIR 18 193 -15 2347 84 3 10 chr17 29443252 29443563 -55994917 + AluY SINE Alu 1 309 -2 1521 187 30 40 chr17 29443658 29443958 -55994522 + AluJo SINE Alu 1 297 -15 1133 127 18 0 chr17 29443968 29444134 -55994346 + AluSg/x SINE Alu 135 303 -7 2140 116 25 0 chr17 29444134 29444419 -55994061 + AluSx SINE Alu 1 292 -20 445 280 53 8 chr17 29444424 29444556 -55993924 - MIR SINE MIR -7 255 118 428 341 133 0 chr17 29444779 29444952 -55993528 - MER91A DNA MER1_type 0 196 1 450 373 18 14 chr17 29444998 29445215 -55993265 + MIR SINE MIR 13 230 -32 1927 146 0 70 chr17 29445607 29445937 -55992543 - AluJb SINE Alu -5 307 1 556 219 91 106 chr17 29445938 29445966 -55992514 - MLT1K LTR MaLR -11 577 550 2194 120 0 0 chr17 29445966 29446292 -55992188 - AluSx SINE Alu 0 326 1 556 219 91 106 chr17 29446292 29446659 -55991821 - MLT1K LTR MaLR -38 550 187 476 306 124 26 chr17 29446789 29446982 -55991498 - MIR SINE MIR -17 245 34 1156 174 13 65 chr17 29447161 29447391 -55991089 + MER20 DNA MER1_type 1 218 -1 1907 122 3 31 chr17 29447483 29447770 -55990710 + AluJo SINE Alu 25 303 -9 2140 118 0 65 chr17 29448151 29448474 -55990006 - AluJb SINE Alu -10 302 1 2240 106 33 0 chr17 29448486 29448787 -55989693 - AluSq SINE Alu -1 312 2 314 305 153 0 chr17 29448836 29448954 -55989526 - MER91A DNA MER1_type -36 160 25 1922 170 0 0 chr17 29449096 29449408 -55989072 - AluSx SINE Alu 0 312 1 2309 75 0 0 chr17 29449440 29449718 -55988762 - AluSg SINE Alu -32 278 1 1132 224 47 83 chr17 29450470 29450669 -55987811 - L2 LINE L2 0 3313 3108 1923 151 0 66 chr17 29450669 29451001 -55987479 + AluJb SINE Alu 1 310 -2 2424 93 0 3 chr17 29451007 29451308 -55987172 + AluSp SINE Alu 3 302 -11 1132 224 47 83 chr17 29451308 29451508 -55986972 - L2 LINE L2 -210 3103 2922 258 360 143 6 chr17 29451516 29451677 -55986803 - MER91A DNA MER1_type -13 183 1 * 407 255 137 25 chr17 29451677 29451818 -55986662 - L2 LINE L2 -383 2931 2773 973 198 72 13 chr17 29451818 29452055 -55986425 - L1MB8 LINE L1 0 6178 5928 1577 216 3 28 chr17 29452063 29452383 -55986097 - AluJo SINE Alu 0 312 1 1001 123 0 6 chr17 29452385 29452556 -55985924 - L1M4 LINE L1 -696 5488 5319 804 70 0 0 chr17 29452556 29452656 -55985824 + AluY SINE Alu 1 100 -211 547 143 9 0 chr17 29452656 29452768 -55985712 - L1M4 LINE L1 -812 5334 5222 1731 211 93 96 chr17 29452773 29452865 -55985615 - L2 LINE L2 -534 2780 2689 2217 96 7 0 chr17 29452865 29453145 -55985335 - AluSg1 SINE Alu -27 282 1 2248 128 0 0 chr17 29453147 29453443 -55985037 - AluSx SINE Alu -16 296 1 1731 211 93 96 chr17 29453443 29453995 -55984485 - L2 LINE L2 -626 2688 2135 773 231 143 26 chr17 29453995 29454477 -55984003 - MLT1H1 LTR MaLR 0 555 1 342 304 11 0 chr17 29454478 29454570 -55983910 - L2 LINE L2 -1176 2138 2046 557 183 21 5 chr17 29454653 29454902 -55983578 + L1MA4A LINE L1 5963 6283 -20 187 167 0 28 chr17 29455200 29455236 -55983244 + L3 LINE CR1 1387 1421 -156 8584 104 5 18 chr17 29455392 29455411 -55983069 - HSMAR2 DNA Mariner -7 1295 1277 2355 90 0 0 chr17 29455411 29455711 -55982769 + AluY SINE Alu 1 300 -11 8584 104 5 18 chr17 29455711 29455868 -55982612 - HSMAR2 DNA Mariner -25 1277 1119 1903 177 0 13 chr17 29455868 29456184 -55982296 - AluJb SINE Alu 0 312 1 8584 104 5 18 chr17 29456184 29456231 -55982249 - HSMAR2 DNA Mariner -183 1119 1073 2363 92 0 0 chr17 29456231 29456526 -55981954 - AluSx SINE Alu -17 295 1 8584 104 5 18 chr17 29456526 29457612 -55980868 - HSMAR2 DNA Mariner -229 1073 1 858 201 42 57 chr17 29457620 29457833 -55980647 + L1ME1 LINE L1 5902 6112 -54 2294 99 0 0 chr17 29457833 29458125 -55980355 - AluSc SINE Alu -17 292 1 858 201 42 57 chr17 29458125 29458175 -55980305 + L1ME1 LINE L1 6112 6161 -5 662 291 48 82 chr17 29458183 29458596 -55979884 + L1MC/D LINE L1 5414 5812 -1996 3885 105 30 55 chr17 29458610 29459005 -55979475 + L1PA15 LINE L1 5275 5678 -487 2412 99 3 0 chr17 29459005 29459317 -55979163 + AluSp SINE Alu 1 313 0 3885 105 30 55 chr17 29459317 29459488 -55978992 + L1PA15 LINE L1 5678 5852 -313 2104 131 0 0 chr17 29459488 29459812 -55978668 + AluSg SINE Alu 1 324 0 2298 86 30 3 chr17 29459822 29460125 -55978355 + AluSq SINE Alu 1 311 -2 3885 105 30 55 chr17 29460125 29460268 -55978212 + L1PA15 LINE L1 5861 5974 -191 1097 121 0 7 chr17 29460268 29460417 -55978063 + AluSq/x SINE Alu 1 148 -165 2006 113 0 0 chr17 29460417 29460673 -55977807 - AluSq SINE Alu -57 256 1 389 290 55 44 chr17 29461328 29461383 -55977097 + MER5A DNA MER1_type 4 57 -132 1933 145 3 29 chr17 29461383 29461716 -55976764 + AluJb SINE Alu 1 312 0 389 290 55 44 chr17 29461716 29461785 -55976695 + MER5A DNA MER1_type 57 133 -56 2516 62 0 7 chr17 29461785 29462092 -55976388 + AluY SINE Alu 1 305 -6 389 290 55 44 chr17 29462092 29462149 -55976331 + MER5A DNA MER1_type 133 188 -1 2025 113 57 7 chr17 29462150 29462432 -55976048 - AluSx SINE Alu -16 296 1 214 175 25 0 chr17 29462672 29462712 -55975768 - MIR SINE MIR -138 124 84 2341 100 3 0 chr17 29463276 29463566 -55974914 - AluSx SINE Alu -21 291 1 2019 87 54 37 chr17 29464210 29464508 -55973972 + AluY SINE Alu 1 303 -8 566 224 168 12 chr17 29464765 29464926 -55973554 + MER5A DNA MER1_type 4 189 0 2634 58 0 3 chr17 29465381 29465693 -55972787 + AluY SINE Alu 1 311 0 520 280 25 6 chr17 29466278 29466435 -55972045 + MIR3 SINE MIR 37 196 -12 265 203 18 3 chr17 29467085 29467151 -55971329 - MIR SINE MIR -71 137 84 237 356 0 0 chr17 29467146 29467219 -55971261 + MIR SINE MIR 150 222 -40 * 952 131 0 7 chr17 29467413 29467550 -55970930 - FLAM_C SINE Alu -7 136 1 2611 61 0 0 chr17 29467559 29467869 -55970611 - AluY SINE Alu -1 310 1 516 340 43 5 chr17 29468086 29468274 -55970206 - MIR3 SINE MIR -12 196 2 2204 129 0 0 chr17 29468277 29468590 -55969890 - AluSx SINE Alu 0 312 1 481 274 63 63 chr17 29468688 29468911 -55969569 + MIR SINE MIR 7 229 -33 1514 86 43 56 chr17 29469369 29469449 -55969031 - MER30 DNA MER1_type 0 230 150 2402 93 0 10 chr17 29469449 29469751 -55968729 - AluSx SINE Alu -13 299 1 1514 86 43 56 chr17 29469751 29469903 -55968577 - MER30 DNA MER1_type -80 150 1 811 289 28 32 chr17 29470771 29471024 -55967456 + MIR SINE MIR 9 260 -2 1673 149 3 106 chr17 29471025 29471210 -55967270 - AluJo SINE Alu -3 299 161 1848 161 0 27 chr17 29471210 29471340 -55967140 + AluJb SINE Alu 1 133 -179 2187 112 20 3 chr17 29471340 29471645 -55966835 + AluSg SINE Alu 1 310 0 1848 161 0 27 chr17 29471645 29471813 -55966667 + AluJb SINE Alu 133 291 -21 1673 149 3 106 chr17 29471813 29471956 -55966524 - AluJo SINE Alu -141 161 5 2177 127 0 16 chr17 29473329 29473645 -55964835 - AluJb SINE Alu -1 311 1 483 186 41 31 chr17 29474086 29474253 -55964227 + L1MC4 LINE L1 7347 7587 -302 457 147 0 0 chr17 29474274 29474342 -55964138 + AluS SINE Alu 229 296 -13 1735 176 21 0 chr17 29474526 29474816 -55963664 + AluJb SINE Alu 1 296 -16 262 305 49 0 chr17 29475051 29475133 -55963347 - L2 LINE L2 -46 3267 3182 376 278 104 0 chr17 29475361 29475476 -55963004 - L2 LINE L2 -220 3052 2926 1853 150 37 7 chr17 29475482 29475776 -55962704 + 7SLRNA srpRNA srpRNA 10 312 -8 712 163 207 0 chr17 29475787 29475922 -55962558 + FRAM SINE Alu 4 166 0 308 93 53 107 chr17 29475951 29476026 -55962454 - MLT2B1 LTR ERVL 0 520 450 2586 78 0 0 chr17 29476026 29476335 -55962145 + AluSc SINE Alu 1 309 0 811 196 54 0 chr17 29476336 29476484 -55961996 + AluJo/FRAM SINE Alu 136 291 -21 789 224 56 32 chr17 29476505 29476615 -55961865 - L1ME1 LINE L1 -150 6016 5910 2408 64 0 0 chr17 29476615 29476953 -55961527 - AluY SINE Alu 0 338 1 789 224 56 32 chr17 29476953 29477091 -55961389 - L1ME1 LINE L1 -256 5910 5761 317 213 0 0 chr17 29477081 29477142 -55961338 + L1ME LINE L1 5784 5844 -320 * 1016 175 0 6 chr17 29477172 29477355 -55961125 + LTR43 LTR ERV1 1 182 -420 2193 122 0 3 chr17 29477383 29477678 -55960802 - AluSx SINE Alu -18 294 1 2932 101 11 39 chr17 29477680 29478051 -55960429 + LTR43 LTR ERV1 150 530 -72 2155 125 0 3 chr17 29478051 29478346 -55960134 - AluSc SINE Alu -15 294 1 2932 101 11 39 chr17 29478346 29478384 -55960096 + LTR43 LTR ERV1 530 547 -55 2341 85 3 0 chr17 29478384 29478678 -55959802 - AluY SINE Alu -16 295 1 2932 101 11 39 chr17 29478678 29478733 -55959747 + LTR43 LTR ERV1 547 602 0 1187 183 61 80 chr17 29478739 29479012 -55959468 - L1ME1 LINE L1 -629 5613 5336 959 217 0 0 chr17 29479012 29479187 -55959293 - FAM SINE Alu 0 175 1 1187 183 61 80 chr17 29479187 29479215 -55959265 - L1ME1 LINE L1 -906 5336 5309 2317 66 35 7 chr17 29479215 29479501 -55958979 + AluY SINE Alu 1 294 -17 1187 183 61 80 chr17 29479501 29479628 -55958852 - L1ME1 LINE L1 -933 5309 5179 730 158 24 31 chr17 29479748 29479875 -55958605 + FLAM_C SINE Alu 1 126 -7 261 275 158 0 chr17 29479886 29480006 -55958474 + Charlie2 DNA MER1_type 439 577 -2285 2497 84 0 6 chr17 29480020 29480331 -55958149 + AluSx SINE Alu 1 309 -3 1031 165 0 0 chr17 29480372 29480536 -55957944 + AluSg/x SINE Alu 135 298 -12 2235 121 3 0 chr17 29480593 29480898 -55957582 - AluSx SINE Alu -6 306 1 1750 173 48 0 chr17 29480983 29481278 -55957202 + AluJb SINE Alu 1 309 -3 237 132 0 0 chr17 29481285 29481323 -55957157 + (TATATG)n Simple_repeat Simple_repeat 2 39 0 916 183 25 5 chr17 29481323 29481519 -55956961 + Charlie2a DNA MER1_type 1646 1845 -1017 2091 176 82 100 chr17 29481519 29482188 -55956292 - LTR8A LTR ERV1 0 727 71 340 259 129 24 chr17 29482223 29482367 -55956113 - L1M2 LINE L1 -696 7791 1804 1341 197 126 78 chr17 29482368 29482412 -55956068 + Charlie2a DNA MER1_type 1861 1901 -961 2330 62 7 36 chr17 29482412 29482719 -55955761 - AluY SINE Alu -13 298 1 1341 197 126 78 chr17 29482719 29482959 -55955521 + Charlie2a DNA MER1_type 1901 2128 -734 1928 138 28 3 chr17 29482959 29483242 -55955238 - AluSx SINE Alu -20 292 3 1341 197 126 78 chr17 29483242 29483615 -55954865 + Charlie2a DNA MER1_type 2128 2481 -381 1699 113 132 0 chr17 29483615 29483880 -55954600 - AluSg SINE Alu 0 300 1 1341 197 126 78 chr17 29483880 29483904 -55954576 + Charlie2a DNA MER1_type 2481 2502 -360 2086 82 6 75 chr17 29483904 29484222 -55954258 + AluSx SINE Alu 1 296 -16 1341 197 126 78 chr17 29484222 29484257 -55954223 + Charlie2a DNA MER1_type 2502 2615 -247 2504 70 0 10 chr17 29484290 29484603 -55953877 - AluY SINE Alu -1 310 1 529 193 8 17 chr17 29484769 29484881 -55953599 - AluJb SINE Alu 0 312 200 1529 165 0 8 chr17 29484881 29485118 -55953362 - AluJb SINE Alu -77 235 1 519 238 25 12 chr17 29485258 29485418 -55953062 - MLT1I LTR MaLR -3 406 245 305 192 13 39 chr17 29485522 29485600 -55952880 - MLT1I LTR MaLR -320 89 14 1860 93 28 0 chr17 29485668 29485843 -55952637 - AluSx SINE Alu 0 312 126 180 0 0 0 chr17 29485843 29485863 -55952617 + (TTTTC)n Simple_repeat Simple_repeat 2 21 0 1860 93 28 0 chr17 29485863 29485935 -55952545 - AluSx SINE Alu -186 126 58 198 103 0 0 chr17 29486092 29486121 -55952359 + (T)n Simple_repeat Simple_repeat 1 29 0 514 197 55 24 chr17 29486361 29486488 -55951992 + MER5B DNA MER1_type 9 139 -39 220 344 0 11 chr17 29486839 29486929 -55951551 + G-rich Low_complexity Low_complexity 2 90 0 23 33 0 0 chr17 29487320 29487350 -55951130 + GC_rich Low_complexity Low_complexity 1 30 0 1984 142 22 65 chr17 29487656 29487700 -55950780 - L1MB4 LINE L1 -6 7593 7549 2194 101 0 26 chr17 29487700 29488007 -55950473 - AluSx SINE Alu -13 299 1 1984 142 22 65 chr17 29488007 29488018 -55950462 - L1MB4 LINE L1 -50 7549 7539 2291 61 0 55 chr17 29488018 29488328 -55950152 - AluY SINE Alu -18 293 1 1984 142 22 65 chr17 29488328 29488688 -55949792 - L1MB4 LINE L1 -60 7539 7195 2389 100 0 0 chr17 29488688 29488989 -55949491 - AluSc SINE Alu -8 301 1 3376 205 20 32 chr17 29488989 29489388 -55949092 - L1MB4 LINE L1 -734 6859 6457 2095 122 10 0 chr17 29489388 29489676 -55948804 - AluSq SINE Alu -17 296 6 3376 205 20 32 chr17 29489676 29489875 -55948605 - L1MB4 LINE L1 -1136 6457 6257 1378 151 159 8 chr17 29489875 29490127 -55948353 + AluJb SINE Alu 1 290 -12 3376 205 20 32 chr17 29490127 29490572 -55947908 - L1MB4 LINE L1 -1336 6257 5829 2244 111 7 0 chr17 29490573 29490893 -55947587 - AluSx SINE Alu 0 312 1 802 148 25 0 chr17 29490934 29491056 -55947424 + FLAM_C SINE Alu 13 137 -6 890 201 6 29 chr17 29491076 29491250 -55947230 + AluJb SINE Alu 120 289 -23 2381 87 3 0 chr17 29491920 29492219 -55946261 - AluSg SINE Alu -10 300 1 6901 131 94 18 chr17 29492220 29493283 -55945197 - L1MB4 LINE L1 -3372 4193 3212 2080 111 0 0 chr17 29493283 29493569 -55944911 - AluSx SINE Alu 0 306 21 1810 74 0 0 chr17 29493569 29493784 -55944696 - AluSq SINE Alu -97 216 1 6901 131 94 18 chr17 29493784 29494521 -55943959 - L1MB4 LINE L1 -4352 3213 2258 6647 61 18 26 chr17 29494522 29495408 -55943072 - SVA Other Other 0 1386 508 599 99 12 0 chr17 29495541 29495622 -55942858 - AluS SINE Alu -230 83 2 2557 171 14 57 chr17 29495622 29496516 -55941964 - L1M3 LINE L1 -575 5608 4758 1554 293 100 72 chr17 29496927 29498185 -55940295 + L2 LINE L2 1864 3172 -100 2081 100 50 0 chr17 29498185 29498464 -55940016 - AluSg SINE Alu -17 293 1 1554 293 100 72 chr17 29498464 29498569 -55939911 + L2 LINE L2 3172 3272 0 617 212 82 38 chr17 29498606 29498790 -55939690 + MIR SINE MIR 30 221 -41 277 262 184 64 chr17 29498819 29498960 -55939520 + MIR SINE MIR 94 251 -11 2116 133 0 10 chr17 29499201 29499501 -55938979 - AluSx SINE Alu -15 297 1 317 235 29 37 chr17 29499596 29499732 -55938748 - L1ME4a LINE L1 -4 6117 5983 2459 84 3 0 chr17 29500386 29500695 -55937785 - AluY SINE Alu -1 310 1 516 140 0 28 chr17 29500744 29500874 -55937606 - AluS SINE Alu -5 307 119 276 100 0 0 chr17 29500874 29500914 -55937566 + (T)n Simple_repeat Simple_repeat 1 40 0 1103 233 5 5 chr17 29502243 29502462 -55936018 + MIR SINE MIR 2 220 -42 933 170 0 0 chr17 29502629 29502776 -55935704 - AluSq/x SINE Alu -165 147 1 701 182 0 63 chr17 29502824 29502967 -55935513 + FLAM_C SINE Alu 3 136 -7 762 123 0 0 chr17 29502967 29503081 -55935399 - L1MA5A LINE L1 -17 6280 6167 940 196 6 0 chr17 29503182 29503350 -55935130 + AluSg/x SINE Alu 130 298 -14 2175 106 0 0 chr17 29503350 29503675 -55934805 + AluSg SINE Alu 1 325 0 499 132 0 0 chr17 29504167 29504243 -55934237 - MLT1A1 LTR MaLR 0 365 290 1690 174 17 11 chr17 29504243 29504530 -55933950 + AluJb SINE Alu 1 289 -23 398 143 13 0 chr17 29504530 29504607 -55933873 + GA-rich Low_complexity Low_complexity 1 78 0 258 136 0 0 chr17 29504601 29504645 -55933835 + (GAAAA)n Simple_repeat Simple_repeat 2 45 0 * 728 130 66 56 chr17 29504649 29504756 -55933724 - MLT1A1 LTR MaLR -55 341 237 2090 106 0 24 chr17 29504756 29505048 -55933432 - AluSx SINE Alu -5 307 23 728 130 66 56 chr17 29505048 29505183 -55933297 - MLT1A1 LTR MaLR -159 237 2 2168 115 7 3 chr17 29505554 29505849 -55932631 - AluSx SINE Alu -10 302 7 2063 123 3 19 chr17 29505864 29506180 -55932300 - AluY SINE Alu 0 311 1 867 112 17 28 chr17 29506775 29506953 -55931527 + (TTTC)n Simple_repeat Simple_repeat 3 178 0 2336 69 0 50 chr17 29507211 29507531 -55930949 - AluY SINE Alu -7 304 1 1181 158 87 21 chr17 29508035 29508276 -55930204 - Tigger7 DNA MER2_type -3 2488 2232 2521 75 0 0 chr17 29510904 29511210 -55927270 - AluY SINE Alu -4 307 2 810 236 16 45 chr17 29561293 29561602 -55876878 + L1M4 LINE L1 2818 3117 -3029 484 303 121 27 chr17 29561738 29561881 -55876599 - L1MC/D LINE L1 -748 5792 5664 270 0 0 0 chr17 29561881 29561911 -55876569 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 484 303 121 27 chr17 29561911 29562061 -55876419 - L1MC/D LINE L1 -876 5664 5530 2412 93 0 19 chr17 29562061 29562374 -55876106 - AluSg SINE Alu -1 309 3 484 303 121 27 chr17 29562374 29562843 -55875637 - L1MC/D LINE L1 -1010 5530 5107 1971 137 0 7 chr17 29562843 29563128 -55875352 - AluSx SINE Alu -29 283 1 484 303 121 27 chr17 29563128 29563141 -55875339 - L1MC/D LINE L1 -1433 5107 5097 2678 36 7 0 chr17 29563141 29563450 -55875030 - AluY SINE Alu 0 311 1 484 303 121 27 chr17 29563450 29563671 -55874809 - L1MC/D LINE L1 -1443 5097 4918 2511 94 3 0 chr17 29563741 29564050 -55874430 + AluSp SINE Alu 1 310 -3 619 329 45 50 chr17 29564097 29564629 -55873851 - L1MDa LINE L1 -3532 3008 2425 2449 79 0 0 chr17 29565360 29565650 -55872830 - AluSq SINE Alu -13 300 11 248 304 0 14 chr17 29565670 29565739 -55872741 + MIR SINE MIR 60 127 -81 470 287 77 0 chr17 29565772 29565915 -55872565 + MLT1I LTR MaLR 25 178 -231 901 254 19 105 chr17 29566063 29566113 -55872367 - MLT1J LTR MaLR -44 467 414 2042 156 3 0 chr17 29566113 29566420 -55872060 - AluSx SINE Alu -4 308 1 901 254 19 105 chr17 29566420 29566684 -55871796 - MLT1J LTR MaLR -97 414 180 265 192 0 26 chr17 29566693 29566771 -55871709 + GA-rich Low_complexity Low_complexity 1 76 0 237 33 0 0 chr17 29567414 29567444 -55871036 + (TG)n Simple_repeat Simple_repeat 2 31 0 962 222 14 0 chr17 29567448 29567664 -55870816 - L1MC4a LINE L1 -1871 5937 5719 2296 113 3 0 chr17 29567690 29568000 -55870480 - AluSx SINE Alu -1 311 1 513 274 31 40 chr17 29568000 29568103 -55870377 - L1MC4a LINE L1 -2078 5730 5628 3710 102 28 2 chr17 29568103 29568643 -55869837 + MER41A LTR ERV1 1 554 0 513 274 31 40 chr17 29568643 29568753 -55869727 - L1MC4a LINE L1 -2180 5628 5517 329 316 11 0 chr17 29568782 29568877 -55869603 - MIR SINE MIR -122 140 45 469 268 49 0 chr17 29569445 29569587 -55868893 - MIR SINE MIR -76 186 38 342 0 0 0 chr17 29569784 29569822 -55868658 + (TG)n Simple_repeat Simple_repeat 2 39 0 277 319 116 14 chr17 29570123 29570330 -55868150 - MLT1K LTR MaLR -346 242 15 679 230 47 24 chr17 29570346 29570559 -55867921 + L2 LINE L2 2231 2448 -866 3545 143 20 15 chr17 29570603 29571044 -55867436 + MER41B LTR ERV1 1 381 -173 2175 101 7 0 chr17 29571044 29571369 -55867111 + AluSq SINE Alu 1 327 0 3545 143 20 15 chr17 29571369 29571544 -55866936 + MER41B LTR ERV1 381 554 0 689 312 51 45 chr17 29571544 29571558 -55866922 + L2 LINE L2 2875 2887 -426 2539 69 3 0 chr17 29571558 29571861 -55866619 - AluY SINE Alu -7 304 1 689 312 51 45 chr17 29571861 29572202 -55866278 + L2 LINE L2 2887 3232 -81 2154 109 0 0 chr17 29572203 29572477 -55866003 - AluSg SINE Alu -36 274 1 249 258 0 0 chr17 29572617 29572710 -55865770 + (TGGA)n Simple_repeat Simple_repeat 4 96 0 2082 119 0 47 chr17 29572923 29573242 -55865238 - AluSx SINE Alu -8 304 1 476 285 20 13 chr17 29573558 29573709 -55864771 - MER117 DNA MER1_type -38 159 8 273 270 146 66 chr17 29573716 29573853 -55864627 - MIR3 SINE MIR -50 158 11 297 261 68 0 chr17 29573875 29573904 -55864576 - MER5B DNA MER1_type -79 99 73 2823 10 0 3 chr17 29573904 29574205 -55864275 - AluYa5 SINE Alu -11 300 1 297 261 68 0 chr17 29574205 29574263 -55864217 - MER5B DNA MER1_type -105 73 6 247 333 10 10 chr17 29574385 29574484 -55863996 + MER5A DNA MER1_type 66 164 -25 301 179 0 0 chr17 29575123 29575179 -55863301 - MIR SINE MIR -102 160 105 687 319 86 9 chr17 29575487 29575813 -55862667 + L1ME4a LINE L1 5582 5932 -189 1039 134 93 10 chr17 29576380 29576574 -55861906 - MER6B DNA MER2_type 0 210 1 273 151 0 0 chr17 29576895 29576948 -55861532 + (TG)n Simple_repeat Simple_repeat 1 53 0 2139 109 0 36 chr17 29577040 29577343 -55861137 + AluSc SINE Alu 1 292 -17 2371 105 0 0 chr17 29577345 29577651 -55860829 + AluSx SINE Alu 1 306 -6 2666 55 0 3 chr17 29577651 29577960 -55860520 + AluY SINE Alu 1 308 -3 1111 215 103 7 chr17 29578194 29578496 -55859984 - MLT1D LTR MaLR -6 499 169 235 254 16 16 chr17 29578599 29578662 -55859818 - MIR SINE MIR -70 138 76 2221 119 3 10 chr17 29579030 29579333 -55859147 - AluSx SINE Alu -11 301 1 424 259 76 57 chr17 29579568 29579683 -55858797 + MIR3 SINE MIR 40 160 -48 2022 131 3 56 chr17 29579683 29580004 -55858476 + AluSx SINE Alu 1 304 -8 424 259 76 57 chr17 29580004 29580046 -55858434 + MIR3 SINE MIR 160 200 -8 228 310 43 35 chr17 29581871 29581987 -55856493 - L2 LINE L2 -20 3252 3136 192 318 131 9 chr17 29582189 29582296 -55856184 + MIR SINE MIR 94 213 -49 193 198 10 115 chr17 29583721 29583817 -55854663 + L2 LINE L2 3153 3238 -75 1527 175 48 19 chr17 29583979 29584271 -55854209 + AluJo SINE Alu 7 306 0 2015 110 0 0 chr17 29584510 29584800 -55853680 + AluSx SINE Alu 31 320 0 209 280 19 128 chr17 29584806 29585063 -55853417 + L2 LINE L2 2813 3041 -231 358 200 39 12 chr17 29585186 29585279 -55853201 + MER20B DNA MER1_type 32 129 -90 188 242 65 0 chr17 29585340 29585402 -55853078 - MIR SINE MIR -62 146 81 2098 243 70 43 chr17 29585958 29586096 -55852384 - L1MC5 LINE L1 -50 7911 7778 222 37 0 0 chr17 29586096 29586123 -55852357 + (TG)n Simple_repeat Simple_repeat 2 28 0 2133 112 3 7 chr17 29586123 29586409 -55852071 - AluSx SINE Alu -27 285 1 2098 243 70 43 chr17 29586409 29586680 -55851800 - L1MC5 LINE L1 -183 7778 7516 2494 86 0 0 chr17 29586680 29586982 -55851498 - AluSq SINE Alu -10 303 2 2098 243 70 43 chr17 29586982 29587168 -55851312 - L1MC5 LINE L1 -445 7516 7336 423 0 0 0 chr17 29587168 29587215 -55851265 + (TAGA)n Simple_repeat Simple_repeat 4 50 0 189 0 0 0 chr17 29587214 29587235 -55851245 + (CA)n Simple_repeat Simple_repeat 2 22 0 * 2098 243 70 43 chr17 29587215 29587456 -55851024 - L1MC5 LINE L1 -625 7336 7070 316 309 59 7 chr17 29587456 29587592 -55850888 - MIR3 SINE MIR -29 179 37 262 228 158 44 chr17 29587616 29587730 -55850750 + MIR SINE MIR 24 150 -112 483 242 65 8 chr17 29588001 29588125 -55850355 - MER45A DNA AcHobo -44 134 4 225 236 56 0 chr17 29588197 29588269 -55850211 - MLT1K LTR MaLR 0 588 513 1583 163 110 3 chr17 29588367 29588649 -55849831 + AluJb SINE Alu 1 312 0 1782 156 30 0 chr17 29588662 29588931 -55849549 + AluJo SINE Alu 3 279 -33 189 0 0 0 chr17 29588931 29588952 -55849528 + (CAAT)n Simple_repeat Simple_repeat 3 23 0 1075 42 14 42 chr17 29589013 29589155 -55849325 + AluY SINE Alu 1 138 -173 1199 101 0 6 chr17 29589255 29589413 -55849067 + AluYa5 SINE Alu 145 301 -10 2310 95 0 7 chr17 29589538 29589834 -55848646 - AluSx SINE Alu -18 294 1 375 242 36 68 chr17 29589895 29590143 -55848337 + HAL1 LINE L1 2222 2461 -46 1183 209 0 4 chr17 29590149 29590379 -55848101 + MER46A DNA MER2_type 8 236 0 2203 104 17 10 chr17 29590561 29590859 -55847621 - AluSq SINE Alu -13 300 1 259 260 190 40 chr17 29590918 29591118 -55847362 - MLT1K LTR MaLR -349 239 10 199 274 39 0 chr17 29591411 29591462 -55847018 + MIR SINE MIR 91 143 -65 284 257 143 0 chr17 29592063 29592168 -55846312 - L2 LINE L2 0 3313 3194 1006 291 80 54 chr17 29592302 29592787 -55845693 - MLT1K LTR MaLR 0 588 91 732 142 0 0 chr17 29593228 29593341 -55845139 + FLAM_C SINE Alu 6 118 -25 262 108 0 0 chr17 29593364 29593401 -55845079 + FLAM_A SINE Alu 81 117 -16 28 0 0 26 chr17 29593404 29593426 -55845054 + AT_rich Low_complexity Low_complexity 1 23 -15 2239 126 3 0 chr17 29593426 29593736 -55844744 + AluSx SINE Alu 1 311 -1 28 0 0 26 chr17 29593736 29593752 -55844728 + AT_rich Low_complexity Low_complexity 23 38 0 188 132 0 79 chr17 29593817 29593855 -55844625 + MIR SINE MIR 21 55 -207 255 159 125 102 chr17 29594381 29594469 -55844011 + MIR3 SINE MIR 104 193 -15 375 23 0 0 chr17 29594510 29594554 -55843926 + (CAT)n Simple_repeat Simple_repeat 3 46 0 336 247 195 37 chr17 29594954 29595144 -55843336 - MLT1K LTR MaLR -349 239 20 348 244 37 0 chr17 29595305 29595387 -55843093 + MIR SINE MIR 62 146 -62 1840 204 47 49 chr17 29595402 29595913 -55842567 + L1ME1 LINE L1 5652 6161 -5 2111 150 0 6 chr17 29596010 29596324 -55842156 + AluJo SINE Alu 1 312 0 965 246 60 38 chr17 29596360 29596475 -55842005 - MLT1K LTR MaLR -57 531 420 2302 91 20 3 chr17 29596475 29596772 -55841708 - AluY SINE Alu -9 302 1 965 246 60 38 chr17 29596772 29596973 -55841507 - MLT1K LTR MaLR -168 420 208 230 250 44 0 chr17 29598678 29598746 -55839734 + MIR SINE MIR 79 149 -113 285 287 66 25 chr17 29598990 29599112 -55839368 + MIR SINE MIR 20 146 -62 1377 153 90 60 chr17 29599316 29599445 -55839035 + AluJo SINE Alu 1 125 -187 2309 111 0 0 chr17 29599445 29599751 -55838729 + AluSx SINE Alu 3 308 -4 1377 153 90 60 chr17 29599751 29599922 -55838558 + AluJo SINE Alu 125 310 -2 380 259 23 38 chr17 29599933 29600064 -55838416 - MER5B DNA MER1_type -49 129 1 1814 164 0 3 chr17 29600433 29600743 -55837737 - AluJb SINE Alu 0 309 1 2341 93 0 26 chr17 29600853 29601166 -55837314 + AluY SINE Alu 1 305 -6 2059 155 0 3 chr17 29601215 29601518 -55836962 + AluJb SINE Alu 1 302 -10 2076 134 3 7 chr17 29602219 29602524 -55835956 + AluSx SINE Alu 1 304 -8 2260 104 3 22 chr17 29602547 29602863 -55835617 + AluSg SINE Alu 1 310 0 1892 164 42 6 chr17 29602923 29603258 -55835222 - MER7A DNA MER2_type -1 345 1 1557 144 0 0 chr17 29603469 29603691 -55834789 - AluSg/x SINE Alu -5 305 84 319 267 69 69 chr17 29605790 29605921 -55832559 + MIR SINE MIR 61 191 -71 576 257 109 0 chr17 29606382 29606565 -55831915 + MIR SINE MIR 60 262 0 206 222 143 16 chr17 29606568 29606631 -55831849 + L2 LINE L2 2993 3063 -209 273 295 208 7 chr17 29606717 29606866 -55831614 + MER5A DNA MER1_type 11 189 0 375 255 98 26 chr17 29607328 29607481 -55830999 + MER46C DNA MER2_type 1 164 -174 345 269 8 50 chr17 29608709 29608767 -55829713 + MER58A DNA MER1_type 2 54 -287 2201 135 0 0 chr17 29608767 29609079 -55829401 - AluSx SINE Alu 0 312 1 345 269 8 50 chr17 29609079 29609139 -55829341 + MER58A DNA MER1_type 54 115 -109 858 230 127 3 chr17 29609390 29609681 -55828799 - MER46C DNA MER2_type -11 327 1 800 143 0 8 chr17 29610399 29610518 -55827962 + FLAM_C SINE Alu 1 118 -25 1894 143 82 6 chr17 29611593 29612184 -55826296 + MER39 LTR ERV1 4 707 0 976 157 0 30 chr17 29613019 29613172 -55825308 - AluJo SINE Alu -30 282 133 1603 184 10 16 chr17 29613172 29613476 -55825004 - AluJo SINE Alu -10 302 1 976 157 0 30 chr17 29613476 29613488 -55824992 - AluJo SINE Alu -179 133 122 291 325 127 42 chr17 29613884 29614050 -55824430 - MIR SINE MIR -27 235 56 211 169 62 77 chr17 29615457 29615522 -55822958 + L2 LINE L2 3174 3237 -35 274 331 60 8 chr17 29615583 29615716 -55822764 - MIR SINE MIR -114 148 9 28 0 0 0 chr17 29615885 29615913 -55822567 + AT_rich Low_complexity Low_complexity 1 28 0 1760 148 50 3 chr17 29615913 29616261 -55822219 + AluSx SINE Alu 1 362 0 2201 128 0 0 chr17 29616263 29616575 -55821905 + AluSx SINE Alu 1 312 0 24 53 0 0 chr17 29616575 29616613 -55821867 + AT_rich Low_complexity Low_complexity 1 38 0 460 325 150 5 chr17 29616654 29616854 -55821626 - MIR SINE MIR -32 230 2 22 35 0 0 chr17 29620056 29620085 -55818395 + GC_rich Low_complexity Low_complexity 1 29 0 23 0 0 0 chr17 29620475 29620498 -55817982 + GC_rich Low_complexity Low_complexity 1 23 0 29 90 0 0 chr17 29620776 29620854 -55817626 + GC_rich Low_complexity Low_complexity 1 78 0 1543 116 104 37 chr17 29621478 29621746 -55816734 + AluJo SINE Alu 1 286 -26 341 226 0 52 chr17 29622755 29622870 -55815610 - MER113 DNA MER1_type? -409 112 4 1885 145 0 43 chr17 29622870 29623195 -55815285 + AluJb SINE Alu 1 311 -1 278 300 143 31 chr17 29623241 29623464 -55815016 + MER112 DNA MER1_type 1 248 -12 1672 120 93 0 chr17 29623513 29623798 -55814682 - AluSx SINE Alu 0 309 1 214 371 10 23 chr17 29624042 29624218 -55814262 + MIR3 SINE MIR 30 206 -2 255 212 91 0 chr17 29624745 29624811 -55813669 + LTR16A LTR ERVL 33 104 -346 253 236 56 11 chr17 29625228 29625317 -55813163 + MIR3 SINE MIR 76 168 -40 291 333 12 0 chr17 29625566 29625647 -55812833 + L2 LINE L2 2986 3067 -205 555 294 9 35 chr17 29625831 29626062 -55812418 + L1MC5 LINE L1 7290 7514 -447 2404 81 7 0 chr17 29626358 29626665 -55811815 + AluSq SINE Alu 1 309 -4 256 376 16 0 chr17 29627078 29627203 -55811277 - MIR3 SINE MIR -6 202 76 1855 139 10 7 chr17 29627496 29627784 -55810696 - AluSx SINE Alu -22 290 2 933 148 0 0 chr17 29627784 29627919 -55810561 - AluJo SINE Alu -177 135 1 2576 32 0 10 chr17 29628018 29628328 -55810152 + AluY SINE Alu 1 307 -4 461 327 107 21 chr17 29628658 29628939 -55809541 + L3 LINE CR1 917 1221 -356 23 68 0 0 chr17 29629269 29629313 -55809167 + GC_rich Low_complexity Low_complexity 1 44 0 229 286 16 0 chr17 29629513 29629576 -55808904 - tRNA-Arg-AGG tRNA tRNA -8 68 5 207 229 0 72 chr17 29629641 29629724 -55808756 + C-rich Low_complexity Low_complexity 4 80 0 236 226 0 75 chr17 29630012 29630105 -55808375 + G-rich Low_complexity Low_complexity 4 89 0 2141 103 14 3 chr17 29630817 29631109 -55807371 - AluSq SINE Alu -18 295 1 494 65 0 0 chr17 29631142 29631204 -55807276 + AluSg SINE Alu 1 62 -248 1350 191 86 27 chr17 29631211 29631611 -55806869 + L1 LINE L1 4904 5330 -816 1417 196 53 18 chr17 29631611 29631896 -55806584 + AluJo SINE Alu 1 295 -17 605 189 105 0 chr17 29631905 29632048 -55806432 + L1MC1 LINE L1 6174 6331 -2 2196 140 42 100 chr17 29632050 29632127 -55806353 + L1MC1 LINE L1 5817 5897 -436 2023 181 70 0 chr17 29632127 29632497 -55805983 + MSTD LTR MaLR 1 396 0 2196 140 42 100 chr17 29632497 29632968 -55805512 + L1MC1 LINE L1 5897 6333 0 2060 127 3 3 chr17 29632968 29633260 -55805220 + AluSx SINE Alu 1 292 -20 1730 129 0 0 chr17 29633302 29633550 -55804930 + AluSg SINE Alu 62 309 -1 764 230 120 23 chr17 29633767 29633984 -55804496 - L2 LINE L2 0 3313 3076 2166 91 0 30 chr17 29633990 29634287 -55804193 - AluSc SINE Alu -21 288 1 2515 62 0 0 chr17 29634307 29634616 -55803864 - AluY SINE Alu -2 309 1 2024 111 3 3 chr17 29634642 29634931 -55803549 + AluSx SINE Alu 2 290 -22 792 241 103 53 chr17 29634932 29635414 -55803066 + MLT1H LTR MaLR 1 549 0 194 185 56 56 chr17 29635531 29635585 -55802895 + MIR SINE MIR 100 153 -55 2241 107 0 0 chr17 29635820 29636128 -55802352 - AluSc SINE Alu -1 308 1 370 224 58 129 chr17 29636240 29636534 -55801946 - MLT1H1 LTR MaLR 0 555 163 1957 104 58 4 chr17 29636534 29636812 -55801668 + AluSq SINE Alu 1 293 -20 370 224 58 129 chr17 29636812 29636935 -55801545 - MLT1H1 LTR MaLR -392 163 33 587 238 199 0 chr17 29638040 29638221 -55800259 + MIR SINE MIR 34 250 -12 1176 232 52 7 chr17 29638632 29638942 -55799538 + MLT1B LTR MaLR 59 382 -8 206 263 79 35 chr17 29639090 29639204 -55799276 + L2 LINE L2 2929 3047 -266 383 256 109 29 chr17 29639225 29639362 -55799118 - MER5B DNA MER1_type -3 175 28 245 306 117 68 chr17 29639577 29639842 -55798638 + L2 LINE L2 2977 3254 -18 473 137 63 40 chr17 29640181 29640319 -55798161 + MLT1C LTR MaLR 1 128 -262 357 150 0 0 chr17 29640324 29640384 -55798096 - MER53 DNA DNA -128 61 2 2223 123 0 0 chr17 29640429 29640739 -55797741 + AluSx SINE Alu 1 310 -2 917 111 0 42 chr17 29643298 29643442 -55795038 - AluSq/x SINE Alu -175 138 1 788 189 24 12 chr17 29644176 29644345 -55794135 + MER5B DNA MER1_type 8 178 0 864 132 7 21 chr17 29644373 29644517 -55793963 - FLAM_C SINE Alu -1 142 1 422 260 39 8 chr17 29644961 29645088 -55793392 + MER5B DNA MER1_type 26 156 -22 1792 154 25 7 chr17 29645092 29645378 -55793102 + AluJo SINE Alu 1 291 -21 405 189 63 0 chr17 29645382 29645477 -55793003 + MER53 DNA DNA 89 189 0 296 267 0 58 chr17 29648237 29648323 -55790157 - MER5B DNA MER1_type -53 125 45 1607 166 20 33 chr17 29650087 29650388 -55788092 + AluJo SINE Alu 1 297 -15 1042 171 6 0 chr17 29650389 29650564 -55787916 + AluJo/FRAM SINE Alu 133 308 -4 324 160 40 40 chr17 29651535 29651610 -55786870 - L1ME4a LINE L1 -1 6120 6046 1872 136 27 7 chr17 29652036 29652337 -55786143 - AluSx SINE Alu -5 307 1 2062 75 82 0 chr17 29652712 29652991 -55785489 - AluSc SINE Alu -7 302 1 227 176 137 0 chr17 29654322 29654373 -55784107 + MIR SINE MIR 117 174 -88 29 47 0 0 chr17 29658757 29658800 -55779680 + AT_rich Low_complexity Low_complexity 1 43 0 2392 62 3 0 chr17 29658852 29659159 -55779321 + AluY SINE Alu 4 311 0 326 111 79 0 chr17 29659174 29659237 -55779243 + MER41B LTR ERV1 482 549 -86 1310 151 10 0 chr17 29659322 29659528 -55778952 + MER2 DNA MER2_type 3 210 -135 1540 126 74 4 chr17 29659534 29659803 -55778677 - AluSx SINE Alu -3 309 22 348 203 27 0 chr17 29659930 29660004 -55778476 - MER116 DNA Mariner -1 79 4 2497 71 0 0 chr17 29660341 29660652 -55777828 + AluY SINE Alu 1 311 0 1231 109 0 0 chr17 29660652 29660826 -55777654 + AluSc SINE Alu 129 302 -7 309 318 83 8 chr17 29660828 29660907 -55777573 - L1ME4a LINE L1 -95 6026 5932 2174 127 3 0 chr17 29660907 29661223 -55777257 - 7SLRNA srpRNA srpRNA -3 317 1 309 318 83 8 chr17 29661223 29661275 -55777205 - L1ME4a LINE L1 -189 5932 5885 1072 149 6 0 chr17 29661277 29661445 -55777035 - AluJ SINE Alu -9 303 135 336 344 162 20 chr17 29661547 29661794 -55776686 - L1ME4a LINE L1 -278 5843 5562 4036 82 35 105 chr17 29662309 29662893 -55775587 + MER51A LTR ERV1 1 533 -101 2118 92 7 0 chr17 29662893 29663187 -55775293 + AluY SINE Alu 6 301 -10 4036 82 35 105 chr17 29663187 29663281 -55775199 + MER51A LTR ERV1 533 632 -2 370 313 127 0 chr17 29663448 29663598 -55774882 + MIR SINE MIR 81 249 -13 419 312 50 0 chr17 29664463 29664604 -55773876 - MIR SINE MIR -6 256 109 225 0 0 0 chr17 29664630 29664655 -55773825 + (CAGGG)n Simple_repeat Simple_repeat 2 26 0 394 265 23 30 chr17 29667219 29667351 -55771129 + MIR SINE MIR 15 145 -117 207 397 26 9 chr17 29668171 29668287 -55770193 + MIR3 SINE MIR 4 121 -87 469 252 157 52 chr17 29668399 29668609 -55769871 + MIR SINE MIR 17 248 -14 228 22 43 43 chr17 29668610 29668656 -55769824 + (CAAAAA)n Simple_repeat Simple_repeat 3 48 0 713 165 0 9 chr17 29668662 29668777 -55769703 - AluJ SINE Alu -59 253 140 401 186 0 0 chr17 29670423 29670493 -55767987 - AluJ SINE Alu -175 137 68 1746 138 35 7 chr17 29671527 29671809 -55766671 + AluJb SINE Alu 1 290 -22 249 33 0 0 chr17 29671814 29671844 -55766636 + (TAAAA)n Simple_repeat Simple_repeat 1 30 0 675 242 0 0 chr17 29671863 29671987 -55766493 + FLAM_A SINE Alu 1 124 -9 5951 128 20 21 chr17 29672060 29672360 -55766120 + L1MA6 LINE L1 5255 5554 -746 2223 95 0 3 chr17 29672360 29672655 -55765825 - AluSg SINE Alu -14 296 3 5951 128 20 21 chr17 29672655 29673396 -55765084 + L1MA6 LINE L1 5554 6295 -5 289 246 71 0 chr17 29673417 29673543 -55764937 + L1M4 LINE L1 2121 2255 -3891 1182 134 119 51 chr17 29673665 29673918 -55764562 + AluJo SINE Alu 12 281 -31 381 325 79 32 chr17 29673932 29674184 -55764296 - L1MCa LINE L1 -4257 2169 1906 364 327 148 25 chr17 29674093 29674371 -55764109 + L1M4 LINE L1 2370 2681 -3465 * 439 226 11 0 chr17 29674711 29674804 -55763676 - MER5A DNA MER1_type -95 94 1 246 248 86 71 chr17 29674807 29675017 -55763463 + L1MC5 LINE L1 7501 7713 -248 950 90 0 15 chr17 29675087 29675220 -55763260 + AluSg SINE Alu 1 131 -179 2244 86 0 3 chr17 29675224 29675525 -55762955 + AluY SINE Alu 1 300 -11 1098 130 5 14 chr17 29675597 29675805 -55762675 - L1M1 LINE L1 -811 5494 5289 2252 117 29 81 chr17 29676210 29676335 -55762145 + MLT1B LTR MaLR 1 131 -259 2149 99 0 0 chr17 29676335 29676638 -55761842 + AluSx SINE Alu 14 316 0 2252 117 29 81 chr17 29676638 29676920 -55761560 + MLT1B LTR MaLR 131 388 -2 2180 120 0 0 chr17 29677058 29677358 -55761122 - AluSx SINE Alu -12 300 1 1965 131 28 103 chr17 29677381 29677417 -55761063 + MER47A DNA MER2_type 1 38 -2285 1838 142 0 26 chr17 29677417 29677719 -55760761 - AluSx SINE Alu -16 296 3 1965 131 28 103 chr17 29677719 29677847 -55760633 + MER47A DNA MER2_type 38 174 -2149 2074 70 70 0 chr17 29677847 29678114 -55760366 + AluY SINE Alu 1 291 -20 207 69 0 0 chr17 29678114 29678143 -55760337 + (CAAAC)n Simple_repeat Simple_repeat 2 30 0 2074 70 70 0 chr17 29678143 29678162 -55760318 + AluY SINE Alu 291 307 -4 1965 131 28 103 chr17 29678162 29678392 -55760088 + MER47A DNA MER2_type 174 366 0 2457 67 0 0 chr17 29678614 29678912 -55759568 - AluSc SINE Alu -11 298 1 2165 119 0 3 chr17 29680000 29680310 -55758170 + AluSc SINE Alu 1 309 0 2217 99 0 0 chr17 29682270 29682573 -55755907 - AluSx SINE Alu -9 303 1 185 239 0 65 chr17 29682606 29682652 -55755828 - L2 LINE L2 -12 3260 3218 * 228 275 184 18 chr17 29682638 29682747 -55755733 - MIR SINE MIR -102 160 34 271 294 0 35 chr17 29683346 29683431 -55755049 - MIR SINE MIR -132 130 49 343 277 88 0 chr17 29683561 29683698 -55754782 - MER104 DNA Tc2 -3 177 29 1682 173 44 0 chr17 29683993 29684288 -55754192 + AluJo SINE Alu 1 308 -4 798 161 0 56 chr17 29684879 29685022 -55753458 + AluSq/x SINE Alu 2 136 -177 329 219 0 14 chr17 29685238 29685311 -55753169 - MIR SINE MIR -38 224 153 739 214 0 31 chr17 29685316 29685475 -55753005 - MIR SINE MIR -78 184 31 302 289 21 31 chr17 29685889 29685986 -55752494 - MIR SINE MIR -79 129 34 651 270 255 27 chr17 29687965 29688369 -55750111 + L2 LINE L2 2814 3309 -4 1628 154 20 33 chr17 29688798 29689104 -55749376 + AluJb SINE Alu 1 302 -10 25 95 0 0 chr17 29691304 29691378 -55747102 + GC_rich Low_complexity Low_complexity 1 74 0 22 0 0 0 chr17 29691546 29691568 -55746912 + GC_rich Low_complexity Low_complexity 1 22 0 182 37 37 0 chr17 29691669 29691696 -55746784 + (CGGGGG)n Simple_repeat Simple_repeat 3 30 0 579 104 179 0 chr17 29692249 29692355 -55746125 + FLAM_C SINE Alu 2 126 -17 246 160 0 0 chr17 29692643 29692693 -55745787 + (CA)n Simple_repeat Simple_repeat 2 51 0 499 262 0 10 chr17 29693072 29693175 -55745305 + AluJo/FLAM SINE Alu 2 103 -209 1188 132 28 38 chr17 29693176 29693388 -55745092 + AluJo SINE Alu 73 282 -30 204 40 0 0 chr17 29693388 29693413 -55745067 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 2080 96 0 0 chr17 29693424 29693695 -55744785 - AluSg SINE Alu -39 271 1 357 243 147 15 chr17 29693748 29693884 -55744596 + MIR SINE MIR 25 178 -84 348 317 156 27 chr17 29694378 29694602 -55743878 + MIR SINE MIR 8 260 -2 749 312 57 0 chr17 29694629 29694876 -55743604 + MIR SINE MIR 2 262 0 900 167 0 42 chr17 29695248 29695278 -55743202 - AluJo/FRAM SINE Alu -15 297 267 2213 105 7 0 chr17 29695278 29695584 -55742896 + AluSx SINE Alu 1 308 -4 900 167 0 42 chr17 29695584 29695721 -55742759 - AluJo/FRAM SINE Alu -45 267 137 361 270 16 48 chr17 29696193 29696319 -55742161 - MIR SINE MIR -65 143 22 2327 94 0 0 chr17 29696428 29696736 -55741744 - AluSg SINE Alu -2 308 1 1979 131 26 3 chr17 29697033 29697338 -55741142 - AluSx SINE Alu 0 312 1 208 323 50 0 chr17 29697506 29697605 -55740875 + MIR3 SINE MIR 93 196 -12 378 263 42 111 chr17 29698265 29698455 -55740025 + MER5B DNA MER1_type 1 177 -1 285 131 0 0 chr17 29698523 29698584 -55739896 + (TTCA)n Simple_repeat Simple_repeat 1 61 0 450 232 109 62 chr17 29698585 29698796 -55739684 - L2 LINE L2 -2 3311 3091 2231 79 9 22 chr17 29698825 29699141 -55739339 - AluSx SINE Alu 0 312 1 382 264 124 3 chr17 29699474 29699632 -55738848 + MIR SINE MIR 3 174 -58 290 248 248 0 chr17 29699720 29699833 -55738647 - MIR3 SINE MIR -1 207 67 263 304 43 17 chr17 29699883 29699998 -55738482 + L2 LINE L2 2942 3059 -213 277 257 229 0 chr17 29700476 29700585 -55737895 - MIR SINE MIR -27 235 102 2270 88 14 0 chr17 29701335 29701632 -55736848 + AluSx SINE Alu 1 301 -11 1122 155 82 5 chr17 29701655 29701874 -55736606 - MIR SINE MIR -21 241 6 201 266 107 112 chr17 29703044 29703144 -55735336 + MIR SINE MIR 46 145 -117 2318 103 0 0 chr17 29703144 29703456 -55735024 + AluSx SINE Alu 1 312 0 3540 183 42 22 chr17 29703459 29704099 -55734381 + MER82 DNA MER2_type 1 653 0 201 266 107 112 chr17 29704099 29704163 -55734317 + MIR SINE MIR 147 213 -49 318 254 206 5 chr17 29704414 29704603 -55733877 + L2 LINE L2 1443 1669 -1645 943 98 0 15 chr17 29704740 29704912 -55733568 - AluSg/x SINE Alu 0 323 154 2062 126 10 0 chr17 29704932 29705233 -55733247 - AluSx SINE Alu -8 304 1 294 254 26 53 chr17 29705328 29705442 -55733038 + L2 LINE L2 2186 2296 -1018 852 276 47 0 chr17 29705445 29705702 -55732778 - LTR16A LTR ERVL -53 397 129 324 301 103 0 chr17 29705994 29706074 -55732406 + L2 LINE L2 2594 2664 -650 1827 142 7 0 chr17 29706074 29706362 -55732118 - AluJo SINE Alu -22 290 1 324 301 103 0 chr17 29706362 29706427 -55732053 + L2 LINE L2 2664 2754 -560 2237 105 3 0 chr17 29706564 29706869 -55731611 - AluSx SINE Alu -6 306 1 290 280 121 38 chr17 29706873 29707112 -55731368 + L2 LINE L2 2996 3254 -59 2215 81 7 3 chr17 29707442 29707738 -55730742 - AluSq SINE Alu -16 297 1 442 257 135 0 chr17 29708008 29708156 -55730324 + MIR SINE MIR 47 214 -48 1743 172 7 7 chr17 29708255 29708551 -55729929 + AluJb SINE Alu 1 296 -16 395 253 62 34 chr17 29708828 29708974 -55729506 + MIR SINE MIR 94 243 -19 237 344 53 38 chr17 29709632 29709763 -55728717 + MIR3 SINE MIR 35 167 -41 1773 129 33 40 chr17 29709969 29710271 -55728209 - AluJb SINE Alu -12 300 1 223 306 56 0 chr17 29710375 29710447 -55728033 + L2 LINE L2 3197 3272 0 411 226 59 10 chr17 29710545 29710647 -55727833 - MIR SINE MIR 0 262 156 513 170 114 54 chr17 29710658 29710775 -55727705 + MER69 DNA AcHobo 8 117 -2409 2239 91 0 3 chr17 29710775 29711071 -55727409 - AluSc SINE Alu -14 295 1 513 170 114 54 chr17 29711071 29711142 -55727338 + MER69 DNA AcHobo 117 2522 -4 367 260 136 2 chr17 29711151 29711263 -55727217 - MIR SINE MIR -60 148 37 2032 94 3 24 chr17 29712201 29712530 -55725950 + AluSx SINE Alu 1 323 0 202 303 37 46 chr17 29713056 29713165 -55725315 + MIR SINE MIR 61 168 -94 * 688 278 90 4 chr17 29713148 29713382 -55725098 - MIR SINE MIR -8 254 1 2147 81 0 42 chr17 29713469 29713778 -55724702 - AluSc SINE Alu -13 296 1 1855 145 29 10 chr17 29713778 29714088 -55724392 - 7SLRNA srpRNA srpRNA -3 317 1 186 43 0 0 chr17 29714099 29714122 -55724358 + (T)n Simple_repeat Simple_repeat 1 23 0 224 259 161 0 chr17 29714268 29714349 -55724131 + MER5A DNA MER1_type 50 143 -46 282 289 141 21 chr17 29714399 29714541 -55723939 + MIR3 SINE MIR 10 168 -40 2039 139 7 0 chr17 29714575 29714885 -55723595 + AluJb SINE Alu 1 312 0 2231 109 3 0 chr17 29714886 29715197 -55723283 + AluSq SINE Alu 1 312 -1 2021 135 3 3 chr17 29715523 29715835 -55722645 + AluSx SINE Alu 1 312 0 1789 69 4 4 chr17 29715841 29716073 -55722407 + AluSq SINE Alu 3 234 -79 520 308 72 21 chr17 29716222 29716459 -55722021 - MIR SINE MIR -6 256 8 2240 107 3 0 chr17 29716707 29717017 -55721463 + AluSx SINE Alu 1 311 -1 276 290 9 48 chr17 29717041 29717157 -55721323 + MIR SINE MIR 11 122 -86 778 178 13 26 chr17 29717247 29717350 -55721130 + MER5B DNA MER1_type 17 119 -59 2216 109 0 13 chr17 29717350 29717663 -55720817 - AluSx SINE Alu -3 309 1 778 178 13 26 chr17 29717663 29717711 -55720769 + MER5B DNA MER1_type 119 166 -12 204 214 162 68 chr17 29717731 29717848 -55720632 - MER5A DNA MER1_type -1 188 61 574 82 0 0 chr17 29717848 29717921 -55720559 + AluJ/FRAM SINE Alu 224 296 -16 532 176 0 0 chr17 29717922 29718007 -55720473 + AluS SINE Alu 2 86 -227 332 289 19 0 chr17 29718126 29718230 -55720250 - MER103 DNA DNA -25 141 36 1019 167 6 0 chr17 29718733 29718901 -55719579 + AluJo SINE Alu 121 289 -23 430 243 71 30 chr17 29719146 29719315 -55719165 - MIR SINE MIR -66 196 21 207 0 0 0 chr17 29720137 29720160 -55718320 + (TAA)n Simple_repeat Simple_repeat 2 24 0 288 223 65 115 chr17 29720254 29720393 -55718087 - MIR SINE MIR -84 178 47 292 241 218 0 chr17 29720587 29720674 -55717806 + MER91C DNA MER1_type 1 106 -34 256 340 57 7 chr17 29720912 29721053 -55717427 - MER103 DNA DNA -1 165 18 324 289 41 25 chr17 29721483 29721604 -55716876 + MIR SINE MIR 57 179 -83 318 257 23 35 chr17 29721733 29721904 -55716576 + (CAGAGA)n Simple_repeat Simple_repeat 5 173 0 207 250 0 0 chr17 29722046 29722094 -55716386 + C-rich Low_complexity Low_complexity 3 50 0 870 200 68 89 chr17 29722484 29722854 -55715626 + MER92B LTR ERV1 271 632 -4 1686 138 48 0 chr17 29723147 29723416 -55715064 + AluJb SINE Alu 11 292 -20 1075 254 92 55 chr17 29724101 29724624 -55713856 + MER34 LTR ERV1 1 542 0 2043 114 0 0 chr17 29724749 29725030 -55713450 - AluSx SINE Alu -19 293 13 2147 122 0 0 chr17 29725071 29725366 -55713114 + AluSx SINE Alu 1 295 -17 1510 104 133 0 chr17 29725822 29726063 -55712417 - AluSx SINE Alu 0 312 40 531 322 6 17 chr17 29726064 29726241 -55712239 - MIR SINE MIR -57 205 31 2015 133 0 16 chr17 29726260 29726576 -55711904 - AluJo SINE Alu -1 311 1 947 297 104 47 chr17 29727355 29727505 -55710975 - L2 LINE L2 0 3313 3173 1364 147 57 0 chr17 29727505 29727750 -55710730 + L1MA4 LINE L1 6039 6297 -3 947 297 104 47 chr17 29727750 29728163 -55710317 - L2 LINE L2 -140 3173 2785 2389 82 0 0 chr17 29728163 29728467 -55710013 - AluSx SINE Alu -8 304 1 947 297 104 47 chr17 29728467 29729042 -55709438 - L2 LINE L2 -528 2785 2097 1673 113 0 4 chr17 29729042 29729323 -55709157 + AluSx SINE Alu 44 323 0 947 297 104 47 chr17 29729323 29729380 -55709100 - L2 LINE L2 -1216 2097 2045 1241 171 94 14 chr17 29729446 29729721 -55708759 + L1MA5A LINE L1 5957 6253 -44 219 331 96 78 chr17 29729721 29729774 -55708706 - L2 LINE L2 -1366 1948 1897 1385 156 9 103 chr17 29729774 29730094 -55708386 + AluJo SINE Alu 1 290 -22 219 331 96 78 chr17 29730094 29730553 -55707927 - L2 LINE L2 -1417 1897 1427 371 333 61 17 chr17 29730650 29730830 -55707650 - MIR SINE MIR -55 207 20 1485 181 50 20 chr17 29731113 29731412 -55707068 + AluJo SINE Alu 1 308 -4 1769 145 32 0 chr17 29731534 29731816 -55706664 + AluJb SINE Alu 2 292 -20 2062 100 7 0 chr17 29731826 29732139 -55706341 + AluSq SINE Alu 5 319 0 1490 163 7 31 chr17 29732157 29732331 -55706149 - AluJb SINE Alu -5 307 130 231 36 0 0 chr17 29732331 29732359 -55706121 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 2281 46 0 7 chr17 29732359 29732639 -55705841 - AluY SINE Alu -30 281 4 1490 163 7 31 chr17 29732639 29732757 -55705723 - AluJb SINE Alu -180 132 21 24 0 0 0 chr17 29733466 29733490 -55704990 + AT_rich Low_complexity Low_complexity 1 24 0 1241 211 55 105 chr17 29733524 29733756 -55704724 + L1MC4 LINE L1 7508 7750 -292 2370 65 0 16 chr17 29733756 29734062 -55704418 + AluSg SINE Alu 1 301 -9 333 0 0 0 chr17 29734062 29734099 -55704381 + (TA)n Simple_repeat Simple_repeat 2 38 0 1241 211 55 105 chr17 29734099 29734428 -55704052 + L1MC4 LINE L1 7748 8042 0 373 278 19 19 chr17 29734718 29734880 -55703600 - LTR37B LTR ERV1 -81 387 226 1876 149 0 16 chr17 29735696 29736004 -55702476 - AluSx SINE Alu -8 304 2 362 302 184 13 chr17 29736106 29736366 -55702114 + L1ME LINE L1 4943 5229 -917 2363 89 0 0 chr17 29736653 29736956 -55701524 - AluSx SINE Alu -9 303 1 1264 184 23 9 chr17 29737005 29737223 -55701257 - MER58A DNA MER1_type -3 221 1 2421 54 0 3 chr17 29737335 29737630 -55700850 + AluY SINE Alu 1 294 -17 300 308 13 0 chr17 29737635 29737713 -55700767 + L1ME LINE L1 5742 5820 -301 2091 117 0 0 chr17 29737806 29738115 -55700365 + AluSq SINE Alu 1 309 0 676 318 67 46 chr17 29738143 29738308 -55700172 + L1ME LINE L1 4301 4461 -1660 2130 111 0 13 chr17 29738308 29738624 -55699856 + AluSq SINE Alu 1 312 -1 676 318 67 46 chr17 29738624 29738835 -55699645 + L1ME LINE L1 4461 4666 -1455 2180 125 0 0 chr17 29738835 29739147 -55699333 - AluSx SINE Alu 0 312 1 676 318 67 46 chr17 29739147 29739705 -55698775 + L1ME LINE L1 4666 5277 -844 1700 157 20 0 chr17 29739705 29739823 -55698657 + AluSx SINE Alu 9 123 -189 246 32 0 0 chr17 29739823 29739854 -55698626 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1700 157 20 0 chr17 29739854 29740029 -55698451 + AluSx SINE Alu 123 308 -4 676 318 67 46 chr17 29740029 29740467 -55698013 + L1ME LINE L1 5277 5704 -417 297 342 61 56 chr17 29740632 29740676 -55697804 - L2 LINE L2 -215 3057 3015 939 118 0 0 chr17 29740676 29740803 -55697677 - FLAM_C SINE Alu -5 128 2 297 342 61 56 chr17 29740803 29740989 -55697491 - L2 LINE L2 -257 3015 2826 2102 65 0 14 chr17 29742583 29742860 -55695620 + AluY SINE Alu 39 311 0 269 246 59 55 chr17 29743357 29743543 -55694937 - MIR SINE MIR -62 146 12 1097 265 168 34 chr17 29744299 29744430 -55694050 + MER21B LTR ERV1 137 249 -614 1599 171 3 17 chr17 29744430 29744722 -55693758 - AluJo SINE Alu -24 288 1 1097 265 168 34 chr17 29744722 29745144 -55693336 + MER21B LTR ERV1 249 764 -99 1797 132 0 69 chr17 29746467 29746785 -55691695 - AluJb SINE Alu -16 296 1 1839 151 0 13 chr17 29746967 29747272 -55691208 + AluJb SINE Alu 1 301 -11 266 241 0 76 chr17 29747329 29747408 -55691072 - MER81 DNA DNA -4 110 38 300 252 135 45 chr17 29748197 29748308 -55690172 + L1ME3A LINE L1 6044 6164 -6 339 267 19 9 chr17 29748438 29748543 -55689937 - L1ME LINE L1 -302 5819 5714 448 295 28 93 chr17 29748601 29748968 -55689512 + L2 LINE L2 2460 2759 -554 2437 59 0 7 chr17 29748968 29749274 -55689206 + AluY SINE Alu 1 304 -7 448 295 28 93 chr17 29749274 29749642 -55688838 + L2 LINE L2 2759 3149 -164 2253 91 0 7 chr17 29749773 29750082 -55688398 - AluSx SINE Alu -5 307 1 501 271 15 0 chr17 29750375 29750508 -55687972 + L2 LINE L2 3167 3301 -12 641 162 17 8 chr17 29750538 29750643 -55687837 + AluSp/q SINE Alu 188 296 -17 180 0 0 0 chr17 29750643 29750663 -55687817 + (CAT)n Simple_repeat Simple_repeat 2 21 0 641 162 17 8 chr17 29750663 29750674 -55687806 + AluSp/q SINE Alu 296 305 -8 923 148 13 13 chr17 29750675 29750830 -55687650 - FRAM SINE Alu -22 154 1 207 100 0 0 chr17 29750901 29750931 -55687549 + (TTCA)n Simple_repeat Simple_repeat 1 30 0 204 314 0 0 chr17 29750931 29750982 -55687498 - L2 LINE L2 -13 3300 3250 2163 112 0 6 chr17 29752366 29752678 -55685802 + AluSx SINE Alu 1 310 -2 2189 99 0 16 chr17 29752727 29753040 -55685440 + AluSc SINE Alu 1 308 -1 467 208 39 15 chr17 29753192 29753322 -55685158 - MIR SINE MIR -56 206 74 22 0 0 0 chr17 29753341 29753363 -55685117 + AT_rich Low_complexity Low_complexity 1 22 0 224 240 27 13 chr17 29753628 29753703 -55684777 - MIR SINE MIR -55 153 78 181 268 18 36 chr17 29754204 29754260 -55684220 + MIR SINE MIR 91 145 -63 945 252 45 8 chr17 29754337 29754579 -55683901 - MIR SINE MIR 0 262 12 826 117 36 36 chr17 29754734 29754751 -55683729 + AluSc SINE Alu 115 131 -178 2256 97 0 3 chr17 29754751 29755050 -55683430 + AluSx SINE Alu 1 298 -14 826 117 36 36 chr17 29755050 29755169 -55683311 + AluSc SINE Alu 130 251 -58 413 341 91 19 chr17 29755281 29755589 -55682891 + L1ME1 LINE L1 1 330 -6210 327 289 64 39 chr17 29755773 29755929 -55682551 + L1ME1 LINE L1 776 935 -5595 352 258 11 21 chr17 29755978 29756071 -55682409 + L1ME1 LINE L1 911 1002 -5541 804 209 11 23 chr17 29756096 29756273 -55682207 + FRAM SINE Alu 1 40 0 929 255 47 52 chr17 29756285 29756408 -55682072 + L1ME1 LINE L1 1026 1148 -5395 2419 63 0 0 chr17 29756408 29756709 -55681771 + AluY SINE Alu 1 301 -10 929 255 47 52 chr17 29756709 29757009 -55681471 + L1ME1 LINE L1 1148 1447 -5096 * 2344 235 53 47 chr17 29757003 29757452 -55681028 + L1ME1 LINE L1 2757 3202 -3338 1725 141 25 7 chr17 29757452 29757728 -55680752 - AluJo SINE Alu -30 282 2 2344 235 53 47 chr17 29757728 29757767 -55680713 + L1ME1 LINE L1 3202 3239 -3301 2206 95 0 13 chr17 29757767 29758071 -55680409 + AluSq SINE Alu 2 301 -12 2344 235 53 47 chr17 29758071 29758112 -55680368 + L1ME1 LINE L1 3239 3278 -3262 1843 149 10 16 chr17 29758112 29758387 -55680093 + AluSx SINE Alu 5 279 -33 186 43 0 0 chr17 29758387 29758410 -55680070 + (GAAAA)n Simple_repeat Simple_repeat 2 24 0 1843 149 10 16 chr17 29758410 29758443 -55680037 + AluSx SINE Alu 279 311 -1 2344 235 53 47 chr17 29758443 29758523 -55679957 + L1ME1 LINE L1 3278 3356 -3184 2107 96 3 3 chr17 29758523 29758825 -55679655 - AluSp SINE Alu 0 302 1 2344 235 53 47 chr17 29758825 29759094 -55679386 + L1ME1 LINE L1 3356 3622 -2918 1795 154 3 10 chr17 29759094 29759392 -55679088 + AluJo SINE Alu 1 296 -16 2344 235 53 47 chr17 29759392 29759778 -55678702 + L1ME1 LINE L1 3622 4090 -2450 2533 59 0 0 chr17 29759778 29760085 -55678395 + AluY SINE Alu 2 308 -3 2344 235 53 47 chr17 29760085 29760383 -55678097 + L1ME1 LINE L1 4090 4385 -2155 724 256 214 40 chr17 29760391 29760817 -55677663 + L1ME1 LINE L1 6041 6543 -16 2048 128 0 13 chr17 29760859 29761165 -55677315 + AluJb SINE Alu 1 302 -10 2270 80 0 0 chr17 29761208 29761523 -55676957 - AluSq SINE Alu 0 315 1 1682 157 38 3 chr17 29761525 29761812 -55676668 - AluJb SINE Alu -15 297 1 469 227 36 0 chr17 29761813 29761923 -55676557 + Charlie8 DNA MER1_type 130 243 -2174 251 220 305 1 chr17 29763449 29763544 -55674936 - MER45 DNA AcHobo -62 116 1 307 231 56 13 chr17 29763561 29763669 -55674811 + MIR SINE MIR 75 139 -69 473 261 7 39 chr17 29763899 29764052 -55674428 + MIR3 SINE MIR 55 202 -6 215 187 27 80 chr17 29764213 29764288 -55674192 + MIR SINE MIR 83 153 -109 575 270 26 0 chr17 29764410 29764562 -55673918 + MLT1L LTR MaLR 120 275 -340 421 338 20 0 chr17 29764655 29764803 -55673677 + MLT1L LTR MaLR 443 593 -22 339 276 0 33 chr17 29765429 29765559 -55672921 + MIR SINE MIR 27 149 -59 241 283 0 0 chr17 29766722 29766782 -55671698 + MIR SINE MIR 107 166 -96 263 304 0 0 chr17 29767052 29767121 -55671359 - MIR SINE MIR -109 153 85 185 385 57 8 chr17 29768111 29768233 -55670247 - MIR SINE MIR -75 187 60 2182 78 0 3 chr17 29768237 29768548 -55669932 - AluY SINE Alu 0 310 1 183 245 0 19 chr17 29768686 29768739 -55669741 + MER5B DNA MER1_type 103 154 -24 1257 112 0 0 chr17 29769028 29769198 -55669282 - AluSx SINE Alu -142 170 1 201 39 0 0 chr17 29769283 29769309 -55669171 + (CAT)n Simple_repeat Simple_repeat 3 28 0 358 378 79 4 chr17 29769458 29769699 -55668781 - MIR SINE MIR -2 260 2 388 242 139 30 chr17 29770048 29770213 -55668267 + MLT1K LTR MaLR 7 189 -399 418 343 18 69 chr17 29770218 29770495 -55667985 + L1M4 LINE L1 3854 4116 -2030 556 335 22 33 chr17 29770970 29771242 -55667238 + L1M4 LINE L1 4182 4450 -1696 1626 270 109 12 chr17 29771509 29772220 -55666260 + L1MC4 LINE L1 6990 7904 -138 1924 129 23 13 chr17 29772281 29772590 -55665890 + AluJo SINE Alu 1 312 0 325 248 115 76 chr17 29772703 29772860 -55665620 + L1MC/D LINE L1 2350 2512 -4028 291 279 48 36 chr17 29772869 29773120 -55665360 + L1MC/D LINE L1 5662 5915 -2521 1962 78 0 11 chr17 29773990 29774258 -55664222 + AluSx SINE Alu 33 297 -15 678 210 21 7 chr17 29775100 29775243 -55663237 - MIR SINE MIR -105 157 13 335 219 68 3 chr17 29775864 29775964 -55662516 + MIR SINE MIR 17 122 -86 2285 94 0 7 chr17 29776008 29776317 -55662163 + AluSc SINE Alu 1 307 -2 249 281 73 0 chr17 29776590 29776672 -55661808 - MIR SINE MIR -61 201 114 2255 63 0 14 chr17 29776704 29777048 -55661432 + AluY SINE Alu 1 340 0 368 71 18 0 chr17 29777396 29777452 -55661028 + (TGGA)n Simple_repeat Simple_repeat 3 59 0 207 216 0 48 chr17 29777516 29777641 -55660839 + (TGGA)n Simple_repeat Simple_repeat 4 122 0 333 271 70 23 chr17 29777676 29777805 -55660675 + L3 LINE CR1 1313 1447 -130 2212 83 0 13 chr17 29778339 29778641 -55659839 - AluY SINE Alu -13 298 1 638 298 158 12 chr17 29778960 29779565 -55658915 + L2 LINE L2 2535 3308 -5 2242 92 3 0 chr17 29779570 29779865 -55658615 - AluSx SINE Alu -16 296 1 2209 112 0 6 chr17 29779884 29780198 -55658282 - AluSx SINE Alu 0 312 1 1878 106 42 7 chr17 29781289 29781572 -55656908 + AluSx SINE Alu 1 293 -19 1011 169 6 0 chr17 29781582 29781754 -55656726 + FRAM SINE Alu 1 165 -11 609 252 7 0 chr17 29783126 29783261 -55655219 - MIR SINE MIR -24 238 103 2034 143 0 6 chr17 29783410 29783724 -55654756 - AluJb SINE Alu 0 312 1 3077 202 11 11 chr17 29783804 29784444 -55654036 - L1MC3 LINE L1 -166 7619 6980 21 0 0 0 chr17 29784672 29784693 -55653787 + GC_rich Low_complexity Low_complexity 1 21 0 468 323 97 9 chr17 29784823 29785049 -55653431 + L3 LINE CR1 605 850 -727 461 322 68 6 chr17 29785077 29785254 -55653226 + L1MC4a LINE L1 7463 7650 -158 249 270 27 9 chr17 29785259 29785370 -55653110 + L1ME4a LINE L1 5830 5942 -179 362 310 110 71 chr17 29785552 29786071 -55652409 + L3 LINE CR1 864 1402 -175 363 189 81 45 chr17 29787865 29787976 -55650504 - MIR SINE MIR -132 130 16 259 349 46 31 chr17 29788495 29788690 -55649790 + L2 LINE L2 2989 3186 -86 260 305 86 8 chr17 29789144 29789272 -55649208 + MIR SINE MIR 75 212 -50 184 234 64 0 chr17 29790433 29790480 -55648000 + L2 LINE L2 2702 2751 -563 199 208 65 78 chr17 29790775 29790852 -55647628 + MIR SINE MIR 166 241 -21 238 289 41 50 chr17 29790937 29791058 -55647422 + L2 LINE L2 3153 3272 0 1266 222 130 75 chr17 29791064 29791119 -55647361 + MLT1D LTR MaLR 3 54 -451 1925 120 97 3 chr17 29791119 29791427 -55647053 - MER1B DNA MER1_type 0 337 1 1266 222 130 75 chr17 29791427 29791484 -55646996 + MLT1D LTR MaLR 54 106 -399 1919 155 0 7 chr17 29791484 29791794 -55646686 + AluJb SINE Alu 1 308 -4 1266 222 130 75 chr17 29791794 29792157 -55646323 + MLT1D LTR MaLR 106 505 0 201 348 51 34 chr17 29792196 29792314 -55646166 + MIR SINE MIR 20 139 -123 186 244 0 0 chr17 29792358 29792399 -55646081 + L2 LINE L2 3207 3247 -25 241 111 0 0 chr17 29793166 29793202 -55645278 - MIR SINE MIR -11 251 216 289 146 250 0 chr17 29793262 29793358 -55645122 + L2 LINE L2 2934 3053 -219 1989 111 13 17 chr17 29793664 29793822 -55644658 - AluSq SINE Alu -16 297 139 2284 93 3 3 chr17 29793822 29794133 -55644347 - AluSp SINE Alu -2 311 1 1989 111 13 17 chr17 29794133 29794272 -55644208 - AluSq SINE Alu -174 139 1 251 241 191 80 chr17 29794705 29795051 -55643429 - L1ME4a LINE L1 -117 6004 5611 2309 81 3 7 chr17 29795051 29795358 -55643122 - AluSp SINE Alu -7 306 1 251 241 191 80 chr17 29795358 29795388 -55643092 - L1ME4a LINE L1 -510 5611 5586 292 254 34 67 chr17 29795460 29795669 -55642811 - L1ME4a LINE L1 -2338 5470 5269 1855 133 28 0 chr17 29795785 29796071 -55642409 - AluSx SINE Alu -12 300 7 317 291 71 7 chr17 29796107 29796248 -55642232 + MLT1I LTR MaLR 1 150 -259 380 275 102 18 chr17 29796269 29796436 -55642044 + MER3 DNA MER1_type 29 209 0 * 817 168 103 0 chr17 29796290 29796445 -55642035 - MER3 DNA MER1_type 0 209 39 378 233 37 132 chr17 29796623 29796812 -55641668 + MLT1I LTR MaLR 197 367 -42 423 304 8 0 chr17 29797042 29797167 -55641313 - L1ME4a LINE L1 -1537 4609 4484 2369 82 7 0 chr17 29798112 29798415 -55640065 - AluSp SINE Alu -8 305 1 2045 63 12 0 chr17 29798562 29798825 -55639655 - AluY SINE Alu -9 302 45 1917 133 48 0 chr17 29799673 29799967 -55638513 - AluSx SINE Alu -4 308 1 195 280 20 0 chr17 29800734 29800784 -55637696 + MER5A DNA MER1_type 107 157 -32 26 0 0 0 chr17 29804030 29804056 -55634424 + AT_rich Low_complexity Low_complexity 1 26 0 1912 166 45 0 chr17 29805112 29805444 -55633036 - MER7A DNA MER2_type 0 346 2 1804 182 0 0 chr17 29806041 29806327 -55632153 - AluJo SINE Alu -22 290 5 720 198 77 16 chr17 29806441 29806623 -55631857 + L1ME3A LINE L1 5969 6161 -9 198 0 0 0 chr17 29807410 29807432 -55631048 + (CTAAT)n Simple_repeat Simple_repeat 5 26 0 520 110 81 88 chr17 29808627 29808763 -55629717 + L1ME4a LINE L1 5959 6093 -28 226 283 9 94 chr17 29809779 29809885 -55628595 + L2 LINE L2 3116 3212 -60 2119 108 3 10 chr17 29810637 29810925 -55627555 + AluSx SINE Alu 12 297 -15 580 147 0 11 chr17 29811093 29811344 -55627136 - AluJb SINE Alu -9 303 1 23 92 0 0 chr17 29812055 29812120 -55626360 + AT_rich Low_complexity Low_complexity 1 65 0 763 187 0 8 chr17 29812322 29812456 -55626024 - FLAM_A SINE Alu 0 133 1 2234 107 0 3 chr17 29812830 29813130 -55625350 + AluSg SINE Alu 1 299 -11 1694 159 72 3 chr17 29813754 29814044 -55624436 - AluJb SINE Alu -2 310 1 2111 128 0 0 chr17 29815020 29815325 -55623155 + AluSx SINE Alu 1 305 -7 2421 77 3 0 chr17 29815325 29815623 -55622857 + AluY SINE Alu 1 299 -12 634 247 60 22 chr17 29816858 29817040 -55621440 - MER5A DNA MER1_type 0 189 1 273 119 0 0 chr17 29817935 29817977 -55620503 + (T)n Simple_repeat Simple_repeat 1 42 0 188 309 124 0 chr17 29819110 29819207 -55619273 - L2 LINE L2 -5 3308 3200 2349 75 0 0 chr17 29819301 29819607 -55618873 + AluSc SINE Alu 1 306 0 257 145 113 0 chr17 29820692 29820754 -55617726 + L1ME4a LINE L1 6028 6096 -25 1936 140 7 3 chr17 29823199 29823492 -55614988 - AluJb SINE Alu -18 294 1 267 299 49 83 chr17 29823648 29823792 -55614688 - MIR3 SINE MIR -48 160 22 454 354 102 44 chr17 29823848 29824223 -55614257 + L2 LINE L2 2142 2494 -820 482 226 122 0 chr17 29824223 29824338 -55614142 - FLAM_A SINE Alu -4 129 1 454 354 102 44 chr17 29824338 29824641 -55613839 + L2 LINE L2 2494 2859 -455 1565 172 52 0 chr17 29825421 29825709 -55612771 - AluJb SINE Alu 0 302 1 2254 117 0 3 chr17 29825850 29826159 -55612321 + AluSx SINE Alu 1 308 -4 28 29 0 0 chr17 29826586 29826621 -55611859 + AT_rich Low_complexity Low_complexity 1 35 0 225 292 31 0 chr17 29826931 29826996 -55611484 - LTR6A LTR ERV1 -320 244 178 904 86 111 94 chr17 29827046 29827080 -55611400 - L1MA8 LINE L1 -4 6287 6255 1531 127 9 0 chr17 29827080 29827308 -55611172 + MER30 DNA MER1_type 1 230 0 904 86 111 94 chr17 29827308 29827343 -55611137 - L1MA8 LINE L1 -36 6255 6222 2453 77 3 6 chr17 29827343 29827656 -55610824 + AluSx SINE Alu 1 312 0 904 86 111 94 chr17 29827656 29827819 -55610661 - L1MA8 LINE L1 -69 6222 6050 206 256 190 50 chr17 29829048 29829169 -55609311 - MIR SINE MIR -46 216 79 239 0 32 0 chr17 29829940 29829971 -55608509 + (CAAA)n Simple_repeat Simple_repeat 4 35 0 215 222 19 0 chr17 29830642 29830696 -55607784 + GA-rich Low_complexity Low_complexity 2 56 0 198 0 0 0 chr17 29832219 29832241 -55606239 + (A)n Simple_repeat Simple_repeat 1 22 0 1542 162 0 0 chr17 29833914 29834155 -55604325 - AluSx SINE Alu -8 304 64 807 135 0 0 chr17 29834157 29834268 -55604212 - AluSq/x SINE Alu -202 111 1 1970 146 3 7 chr17 29835085 29835387 -55603093 - AluJb SINE Alu -11 301 1 1958 170 0 0 chr17 29835498 29835798 -55602682 - AluJb SINE Alu -12 300 1 1847 145 35 0 chr17 29836463 29836745 -55601735 - AluSx SINE Alu -20 292 1 374 265 148 19 chr17 29836820 29836982 -55601498 + MIR3 SINE MIR 21 203 -5 200 214 179 0 chr17 29837273 29837329 -55601151 - MIR SINE MIR -115 147 82 237 132 0 0 chr17 29837334 29837372 -55601108 + (CA)n Simple_repeat Simple_repeat 2 39 0 339 25 0 0 chr17 29837440 29837480 -55601000 + (CA)n Simple_repeat Simple_repeat 2 41 0 235 161 36 0 chr17 29837482 29837538 -55600942 + (TA)n Simple_repeat Simple_repeat 1 58 0 1891 149 7 0 chr17 29837543 29837832 -55600648 - AluJb SINE Alu -21 291 1 263 246 123 44 chr17 29837996 29838110 -55600370 + MIR SINE MIR 124 246 -16 183 42 0 0 chr17 29838203 29838227 -55600253 + (T)n Simple_repeat Simple_repeat 1 24 0 399 278 70 9 chr17 29839357 29839472 -55599008 + MIR SINE MIR 25 146 -116 558 233 45 74 chr17 29839797 29839999 -55598481 + L2 LINE L2 3101 3296 -17 21 57 0 0 chr17 29840573 29840608 -55597872 + AT_rich Low_complexity Low_complexity 1 35 0 21 36 0 0 chr17 29841092 29841120 -55597360 + AT_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr17 29842457 29842481 -55595999 + AT_rich Low_complexity Low_complexity 1 24 0 26 0 0 0 chr17 29842787 29842813 -55595667 + AT_rich Low_complexity Low_complexity 1 26 0 1896 138 0 48 chr17 29843086 29843397 -55595083 + AluJb SINE Alu 1 296 -16 21 0 0 0 chr17 29843728 29843749 -55594731 + AT_rich Low_complexity Low_complexity 1 21 0 353 205 8 0 chr17 29843783 29843910 -55594570 + (TA)n Simple_repeat Simple_repeat 1 128 0 277 330 77 0 chr17 29844020 29844111 -55594369 + L2 LINE L2 3161 3258 -14 2311 49 3 39 chr17 29844875 29845181 -55593299 - AluY SINE Alu -16 295 1 752 121 7 93 chr17 29845313 29845503 -55592977 - L1MB3 LINE L1 0 6171 6025 381 171 67 9 chr17 29845513 29845618 -55592862 - L1MB3 LINE L1 -302 5819 5709 772 195 97 26 chr17 29845619 29845845 -55592635 + L1ME3 LINE L1 5921 6162 0 373 324 7 8 chr17 29845881 29846024 -55592456 - L1MB3 LINE L1 -458 5663 5527 523 173 127 9 chr17 29846115 29846225 -55592255 - FLAM_A SINE Alu -10 123 1 294 95 0 0 chr17 29846328 29846370 -55592110 + (TTCA)n Simple_repeat Simple_repeat 3 44 0 2243 92 0 0 chr17 29846370 29846652 -55591828 - AluSg SINE Alu -28 282 1 821 126 6 120 chr17 29846896 29847079 -55591401 - AluJb SINE Alu -11 301 140 307 267 97 68 chr17 29847268 29847474 -55591006 - L1MB3 LINE L1 -1379 4767 4556 1003 126 0 50 chr17 29849875 29850034 -55588446 - FAM SINE Alu -13 172 22 418 237 105 13 chr17 29850567 29850719 -55587761 - MIR SINE MIR -94 168 3 21 0 0 0 chr17 29851758 29851779 -55586701 + AT_rich Low_complexity Low_complexity 1 21 0 1760 107 29 0 chr17 29851810 29852054 -55586426 + AluSq SINE Alu 1 251 -62 395 131 4 0 chr17 29852066 29852151 -55586329 + AluS SINE Alu 229 306 0 2222 81 7 0 chr17 29852412 29852697 -55585783 - AluSq SINE Alu -19 294 8 685 294 105 47 chr17 29853567 29854016 -55584464 + MLT1K LTR MaLR 112 586 -2 969 104 129 136 chr17 29854174 29854208 -55584272 + L1MA4 LINE L1 6018 6051 -249 1964 150 13 0 chr17 29854208 29854508 -55583972 + AluSx SINE Alu 1 304 -8 969 104 129 136 chr17 29854508 29854703 -55583777 + L1MA4 LINE L1 6051 6247 -53 2228 104 10 0 chr17 29854703 29855011 -55583469 + AluSx SINE Alu 1 311 -1 969 104 129 136 chr17 29855011 29855060 -55583420 + L1MA4 LINE L1 6247 6295 -5 414 303 15 8 chr17 29855529 29855661 -55582819 + MER5A DNA MER1_type 7 139 -50 1721 123 0 61 chr17 29855678 29855955 -55582525 - AluJb SINE Alu -52 260 1 641 226 0 24 chr17 29856406 29856530 -55581950 - FLAM_A SINE Alu -11 122 2 1892 137 0 69 chr17 29856530 29856865 -55581615 - AluSx SINE Alu 0 312 1 333 0 0 0 chr17 29856932 29856969 -55581511 + (TG)n Simple_repeat Simple_repeat 2 38 0 192 313 0 60 chr17 29858612 29858679 -55579801 + MER5A DNA MER1_type 24 86 -103 24 0 0 0 chr17 29858704 29858728 -55579752 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr17 29859669 29859691 -55578789 + AT_rich Low_complexity Low_complexity 1 22 0 342 0 0 0 chr17 29861657 29861695 -55576785 + (TG)n Simple_repeat Simple_repeat 2 39 0 22 0 0 0 chr17 29861934 29861956 -55576524 + AT_rich Low_complexity Low_complexity 1 22 0 549 247 41 41 chr17 29862001 29862147 -55576333 - MER5B DNA MER1_type -1 177 32 888 190 155 20 chr17 29862917 29863117 -55575363 + AluJo SINE Alu 54 280 -32 283 272 136 0 chr17 29863321 29863424 -55575056 - MIR SINE MIR -22 240 124 1820 108 34 3 chr17 29863509 29863805 -55574675 - L1MA1 LINE L1 0 6302 5998 3399 90 17 0 chr17 29863967 29864444 -55574036 + L1MA2 LINE L1 5358 5842 -462 363 280 179 12 chr17 29864490 29864658 -55573822 - MIR SINE MIR -3 259 64 24 0 0 0 chr17 29865120 29865144 -55573336 + AT_rich Low_complexity Low_complexity 1 24 0 252 0 0 0 chr17 29865304 29865332 -55573148 + (CA)n Simple_repeat Simple_repeat 1 28 0 2204 104 0 7 chr17 29865334 29865633 -55572847 - AluSx SINE Alu -15 297 1 21 57 0 0 chr17 29865932 29865967 -55572513 + AT_rich Low_complexity Low_complexity 1 35 0 23 0 0 0 chr17 29866423 29866446 -55572034 + AT_rich Low_complexity Low_complexity 1 23 0 2134 98 3 30 chr17 29866520 29866825 -55571655 - AluSx SINE Alu -13 299 3 301 347 50 0 chr17 29867254 29867375 -55571105 + MIR SINE MIR 20 146 -116 191 246 72 43 chr17 29867465 29867534 -55570946 - L3b LINE CR1 -225 1358 1288 1900 152 0 19 chr17 29867802 29868117 -55570363 + AluJb SINE Alu 1 309 -3 21 82 0 0 chr17 29868158 29868207 -55570273 + AT_rich Low_complexity Low_complexity 1 49 0 480 356 54 4 chr17 29869852 29870091 -55568389 + MIR SINE MIR 2 252 -10 2122 123 7 10 chr17 29870612 29870913 -55567567 + AluSx SINE Alu 1 300 -12 330 318 8 32 chr17 29871374 29871500 -55566980 - MIR3 SINE MIR -43 165 43 1939 132 21 0 chr17 29871734 29872023 -55566457 + AluSx SINE Alu 1 295 -17 216 301 52 46 chr17 29872031 29872052 -55566428 + L2 LINE L2 3155 3174 -139 829 173 0 0 chr17 29872052 29872185 -55566295 - FLAM_C SINE Alu 0 133 1 216 301 52 46 chr17 29872185 29872316 -55566164 + L2 LINE L2 3174 3308 -5 203 171 0 0 chr17 29872621 29872662 -55565818 + (TA)n Simple_repeat Simple_repeat 1 41 0 2136 99 0 17 chr17 29876201 29876494 -55561986 - AluSg SINE Alu -22 288 1 255 333 21 42 chr17 29877237 29877333 -55561147 - MIR3 SINE MIR -22 186 93 2220 260 95 41 chr17 29877562 29878854 -55559626 + L1MC4a LINE L1 4757 5391 -755 807 40 0 0 chr17 29879761 29879861 -55558619 - L1PA3 LINE L1 0 6155 6056 21 0 0 0 chr17 29881331 29881352 -55557128 + AT_rich Low_complexity Low_complexity 1 21 0 2419 100 0 0 chr17 29885847 29886157 -55552323 - AluSq SINE Alu 0 313 4 893 223 123 24 chr17 29886420 29886631 -55551849 - MER8 DNA MER2_type -1 238 7 226 203 25 76 chr17 29886786 29886865 -55551615 - L1MC4 LINE L1 -1341 6701 6627 544 258 55 6 chr17 29886890 29887053 -55551427 + MIR SINE MIR 60 230 -32 338 301 119 28 chr17 29887448 29887624 -55550856 + L1ME LINE L1 3981 4172 -1974 180 77 0 0 chr17 29887777 29887803 -55550677 + (TTCA)n Simple_repeat Simple_repeat 1 26 0 342 0 0 0 chr17 29888011 29888049 -55550431 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 2162 115 0 0 chr17 29888052 29888331 -55550149 - AluSx SINE Alu -33 279 1 522 222 243 0 chr17 29888434 29888628 -55549852 + MIR SINE MIR 18 258 -4 319 286 171 24 chr17 29888969 29889221 -55549259 + L1ME LINE L1 5296 5584 -537 190 344 94 47 chr17 29889686 29889898 -55548582 + L2 LINE L2 2740 2961 -353 2055 123 26 23 chr17 29890226 29890536 -55547944 + AluSq SINE Alu 1 311 -2 232 132 19 19 chr17 29890903 29890956 -55547524 + T-rich Low_complexity Low_complexity 5 57 0 2160 8 0 8 chr17 29890958 29891206 -55547274 - L1PA3 LINE L1 0 6155 5910 1458 160 86 4 chr17 29891218 29891474 -55547006 + AluJb SINE Alu 3 279 -33 342 0 0 0 chr17 29891476 29891514 -55546966 + (CA)n Simple_repeat Simple_repeat 1 38 0 210 218 181 75 chr17 29891648 29891781 -55546699 + MIR SINE MIR 66 212 -50 2065 118 20 0 chr17 29892668 29892965 -55545515 + AluSx SINE Alu 1 303 -9 446 320 93 0 chr17 29893106 29893233 -55545247 + MARNA DNA Mariner 88 236 -350 1311 179 132 12 chr17 29893233 29893490 -55544990 - AluJb SINE Alu -23 289 2 446 320 93 0 chr17 29893490 29893534 -55544946 + MARNA DNA Mariner 236 275 -311 548 259 60 22 chr17 29893562 29893747 -55544733 + MARNA DNA Mariner 347 538 -48 1133 154 0 11 chr17 29893753 29893928 -55544552 - AluSg/x SINE Alu -5 307 135 2107 110 7 0 chr17 29893928 29894218 -55544262 - AluSx SINE Alu -20 292 1 2043 136 0 29 chr17 29894334 29894473 -55544007 + AluSq SINE Alu 1 142 -171 2187 131 0 6 chr17 29894473 29894787 -55543693 + AluSx SINE Alu 1 312 0 2043 136 0 29 chr17 29894787 29894963 -55543517 + AluSq SINE Alu 142 307 -6 1673 128 15 119 chr17 29895280 29895607 -55542873 + AluJo SINE Alu 11 303 -9 2561 50 0 0 chr17 29895620 29895920 -55542560 - AluY SINE Alu -9 302 3 1060 180 19 5 chr17 29896116 29896327 -55542153 + L1MB7 LINE L1 5478 5691 -493 1769 137 26 32 chr17 29896335 29896658 -55541822 + L1MB7 LINE L1 5789 6111 -73 2416 77 0 0 chr17 29896658 29896957 -55541523 - AluY SINE Alu -12 299 1 1769 137 26 32 chr17 29896957 29896977 -55541503 + L1MB7 LINE L1 6111 6130 -54 1935 153 0 13 chr17 29896982 29897282 -55541198 - AluJb SINE Alu -14 298 3 225 191 132 0 chr17 29898090 29898158 -55540322 - MER113 DNA MER1_type? -318 203 127 558 217 94 90 chr17 29898421 29898517 -55539963 + MER58C DNA MER1_type 1 95 -2325 2193 75 14 31 chr17 29898517 29898811 -55539669 - AluSg SINE Alu -6 304 16 558 217 94 90 chr17 29898811 29898926 -55539554 + MER58C DNA MER1_type 95 213 -2 544 140 70 35 chr17 29899444 29899558 -55538922 - FLAM_A SINE Alu -2 140 23 261 167 0 0 chr17 29899705 29899747 -55538733 - 5S rRNA rRNA -79 42 1 1697 151 0 41 chr17 29899800 29900092 -55538388 - AluJo SINE Alu -23 289 10 2471 90 0 0 chr17 29900143 29900453 -55538027 + AluSq SINE Alu 1 310 -3 252 0 0 0 chr17 29900526 29900554 -55537926 + (A)n Simple_repeat Simple_repeat 1 28 0 204 226 0 0 chr17 29900618 29900671 -55537809 + A-rich Low_complexity Low_complexity 1 53 0 801 173 77 13 chr17 29900916 29901072 -55537408 - FRAM SINE Alu -17 159 1 230 245 0 0 chr17 29901100 29901149 -55537331 - LTR33 LTR ERVL 0 521 473 742 316 76 6 chr17 29901214 29901543 -55536937 - LTR33 LTR ERVL -167 354 3 445 318 37 21 chr17 29901549 29901776 -55536704 - MLT1J2 LTR MaLR 0 450 142 2371 163 21 9 chr17 29901776 29902205 -55536275 + Tigger2a DNA MER2_type 1 434 0 445 318 37 21 chr17 29902205 29902311 -55536169 - MLT1J2 LTR MaLR -308 142 39 642 233 37 49 chr17 29902339 29902584 -55535896 - MER46C DNA MER2_type -92 246 5 2321 83 0 0 chr17 29902813 29903102 -55535378 - AluY SINE Alu -9 302 14 1862 142 52 16 chr17 29903382 29903749 -55534731 - Tigger7 DNA MER2_type 0 2587 2208 581 180 0 0 chr17 29903756 29903856 -55534624 - Tigger7 DNA MER2_type -632 101 2 275 347 139 0 chr17 29905547 29905691 -55532789 + MIR3 SINE MIR 30 193 -15 213 39 0 0 chr17 29905696 29905722 -55532758 + (TTG)n Simple_repeat Simple_repeat 2 27 0 21 0 0 0 chr17 29906241 29906262 -55532218 + AT_rich Low_complexity Low_complexity 1 21 0 2229 117 10 3 chr17 29907260 29907567 -55530913 - AluSq SINE Alu -4 309 1 21 0 0 0 chr17 29907567 29907588 -55530892 + AT_rich Low_complexity Low_complexity 1 21 0 304 255 128 43 chr17 29908026 29908167 -55530313 - MER5A DNA MER1_type 0 189 37 243 327 94 38 chr17 29908027 29908186 -55530294 + MER5A DNA MER1_type 14 181 -8 * 307 250 73 10 chr17 29908216 29908312 -55530168 + MIR SINE MIR 160 261 -1 1903 165 0 9 chr17 29908395 29908710 -55529770 - AluJb SINE Alu 0 312 1 1626 260 62 42 chr17 29908992 29909538 -55528942 + MLT1K LTR MaLR 10 566 -22 343 305 16 23 chr17 29909560 29909688 -55528792 - L1MC/D LINE L1 -2009 5799 5673 1963 153 0 23 chr17 29910031 29910339 -55528141 + AluJo SINE Alu 1 301 -11 2289 91 3 3 chr17 29910394 29910690 -55527790 - AluSc SINE Alu -13 296 1 248 333 80 28 chr17 29911123 29911336 -55527144 - L2 LINE L2 -787 2527 2304 2146 122 3 3 chr17 29911805 29912101 -55526379 + AluSq SINE Alu 1 296 -17 197 329 27 14 chr17 29912880 29912953 -55525527 - MIR SINE MIR -116 92 19 258 256 78 0 chr17 29913930 29914020 -55524460 + L1ME LINE L1 5563 5659 -462 589 263 16 43 chr17 29914341 29914596 -55523884 - L1MEd LINE L1 -4862 1257 1010 2246 93 0 39 chr17 29914610 29914920 -55523560 - AluSq SINE Alu -15 298 1 23 0 0 0 chr17 29915206 29915229 -55523251 + AT_rich Low_complexity Low_complexity 1 23 0 264 318 0 0 chr17 29915313 29915401 -55523079 - MIR SINE MIR 0 262 175 200 140 0 35 chr17 29915524 29915581 -55522899 + (TTTTTA)n Simple_repeat Simple_repeat 4 58 0 1686 168 52 3 chr17 29915588 29915874 -55522606 - AluJo SINE Alu -8 304 5 743 102 0 29 chr17 29915875 29916012 -55522468 + (TCTA)n Simple_repeat Simple_repeat 1 133 0 724 203 0 0 chr17 29916013 29916131 -55522349 - FLAM_C SINE Alu -25 118 1 199 350 0 0 chr17 29916817 29916898 -55521582 + MIR SINE MIR 71 150 -69 21 0 0 0 chr17 29917010 29917031 -55521449 + AT_rich Low_complexity Low_complexity 1 21 0 2235 111 0 7 chr17 29917765 29918071 -55520409 - AluSq SINE Alu -9 304 1 337 308 131 8 chr17 29918903 29919033 -55519447 - MIR3 SINE MIR -25 183 38 228 248 114 38 chr17 29919272 29919377 -55519103 - MIR SINE MIR -50 212 100 26 0 0 0 chr17 29919706 29919732 -55518748 + AT_rich Low_complexity Low_complexity 1 26 0 28 86 0 0 chr17 29920172 29920242 -55518238 + AT_rich Low_complexity Low_complexity 1 70 0 2050 101 25 4 chr17 29922593 29922897 -55515583 + AluSx SINE Alu 1 310 0 26 30 0 0 chr17 29922974 29923007 -55515473 + AT_rich Low_complexity Low_complexity 1 33 0 396 104 15 0 chr17 29923162 29923229 -55515251 - HY3 scRNA scRNA -4 97 30 21 36 0 0 chr17 29924257 29924285 -55514195 + AT_rich Low_complexity Low_complexity 1 28 0 24 67 0 0 chr17 29924637 29924682 -55513798 + AT_rich Low_complexity Low_complexity 1 45 0 1929 131 25 45 chr17 29924734 29925048 -55513432 - AluJo SINE Alu -4 308 1 22 35 0 0 chr17 29926882 29926911 -55511569 + AT_rich Low_complexity Low_complexity 1 29 0 28 0 0 0 chr17 29927028 29927056 -55511424 + AT_rich Low_complexity Low_complexity 1 28 0 222 118 0 0 chr17 29927157 29927191 -55511289 + (TCCA)n Simple_repeat Simple_repeat 1 34 0 281 292 56 11 chr17 29927196 29927285 -55511195 - L2 LINE L2 -21 3292 3200 2003 129 42 0 chr17 29930213 29930500 -55507980 + AluSx SINE Alu 5 303 -9 2175 106 3 0 chr17 29930829 29931111 -55507369 - AluSp SINE Alu -30 283 1 590 275 172 0 chr17 29931164 29931426 -55507054 - L1ME3A LINE L1 -287 5883 5577 2289 94 3 3 chr17 29931820 29932117 -55506363 - AluSc SINE Alu -12 297 1 416 342 25 13 chr17 29932162 29932320 -55506160 + MIR SINE MIR 14 173 -89 392 301 138 8 chr17 29932415 29932538 -55505942 + L2 LINE L2 3122 3260 -12 255 294 15 0 chr17 29932802 29932870 -55505610 - L2 LINE L2 -8 3305 3237 3627 181 54 14 chr17 29932949 29933671 -55504809 + MER21B LTR ERV1 4 754 -109 20209 120 46 44 chr17 29934130 29935818 -55502662 + L1MA3 LINE L1 16 1699 -5866 264 30 0 0 chr17 29935818 29935851 -55502629 + (CA)n Simple_repeat Simple_repeat 2 34 0 20209 120 46 44 chr17 29935851 29936625 -55501855 + L1MA3 LINE L1 1699 2470 -5095 651 109 0 0 chr17 29936625 29936726 -55501754 + AluSp/q SINE Alu 210 310 -3 20209 120 46 44 chr17 29936726 29937854 -55500626 + L1MA3 LINE L1 2470 3721 -3844 2147 140 0 0 chr17 29937854 29938161 -55500319 + AluSx SINE Alu 1 307 -5 5543 94 29 25 chr17 29938161 29938968 -55499512 + L1MA3 LINE L1 6782 7595 -129 2267 103 0 3 chr17 29938968 29939269 -55499211 + AluSq SINE Alu 1 300 -13 5543 94 29 25 chr17 29939269 29939400 -55499080 + L1MA3 LINE L1 7595 7724 0 3074 193 100 102 chr17 29939428 29940279 -55498201 - L1MCa LINE L1 -2963 3463 2612 2224 97 3 10 chr17 29940279 29940579 -55497901 - AluSc SINE Alu -11 298 1 3074 193 100 102 chr17 29940579 29941130 -55497350 - L1MCa LINE L1 -3814 2612 32 1731 181 10 16 chr17 29941455 29941769 -55496711 + AluSx SINE Alu 1 312 0 255 281 0 0 chr17 29942028 29942085 -55496395 - L2 LINE L2 0 3313 3257 1965 118 0 37 chr17 29942281 29942577 -55495903 + AluSx SINE Alu 1 285 -27 2287 75 16 10 chr17 29944332 29944640 -55493840 - AluY SINE Alu -1 310 1 974 124 31 6 chr17 29944778 29944939 -55493541 + L1MB1 LINE L1 6003 6167 -1 597 282 79 15 chr17 29944944 29945146 -55493334 - L2 LINE L2 -338 2976 2762 249 204 0 19 chr17 29945740 29945794 -55492686 - L2 LINE L2 -3 3269 3217 243 0 0 0 chr17 29946962 29946989 -55491491 + (A)n Simple_repeat Simple_repeat 1 27 0 1778 178 7 3 chr17 29947224 29947528 -55490952 - MER2 DNA MER2_type 0 345 41 936 198 24 51 chr17 29950241 29950583 -55487897 + L1MB8 LINE L1 5845 6161 -22 717 224 63 44 chr17 29951080 29951285 -55487195 + MER3 DNA MER1_type 1 209 0 369 0 0 0 chr17 29952673 29952714 -55485766 + (TG)n Simple_repeat Simple_repeat 2 42 0 557 235 80 19 chr17 29953518 29953680 -55484800 - MIR SINE MIR -50 212 41 1015 233 18 9 chr17 29955934 29956153 -55482327 + MER58A DNA MER1_type 3 223 -1 1492 140 54 29 chr17 29956162 29956477 -55482003 + MER33 DNA MER1_type 1 323 -1 23 68 0 0 chr17 29957049 29957093 -55481387 + AT_rich Low_complexity Low_complexity 1 44 0 30 69 0 0 chr17 29957777 29957835 -55480645 + AT_rich Low_complexity Low_complexity 1 58 0 310 322 110 67 chr17 29958366 29958711 -55479769 - L1ME4a LINE L1 -242 5879 5520 2999 173 93 24 chr17 29958793 29959392 -55479088 + L1MB7 LINE L1 5457 6110 -74 1195 51 0 6 chr17 29959392 29959548 -55478932 + L1PA4 LINE L1 5998 6152 -3 2999 173 93 24 chr17 29959548 29959624 -55478856 + L1MB7 LINE L1 6110 6179 -5 35 0 0 0 chr17 29959624 29959659 -55478821 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr17 29960052 29960073 -55478407 + AT_rich Low_complexity Low_complexity 1 21 0 658 168 0 181 chr17 29960078 29960162 -55478318 + L1MB8 LINE L1 5982 6001 -177 2179 128 0 0 chr17 29960162 29960474 -55478006 + AluSx SINE Alu 1 312 0 658 168 0 181 chr17 29960474 29960615 -55477865 + L1MB8 LINE L1 6001 6166 -12 1977 91 91 0 chr17 29961076 29961350 -55477130 - AluSx SINE Alu -13 299 1 1939 136 24 0 chr17 29961428 29961722 -55476758 + AluSx SINE Alu 1 301 -11 406 332 108 22 chr17 29962079 29962480 -55476000 - L2 LINE L2 -219 3053 2622 815 219 167 5 chr17 29963415 29963630 -55474850 - MIR SINE MIR 0 262 13 736 180 20 7 chr17 29963750 29963900 -55474580 + FRAM SINE Alu 1 150 -26 538 223 66 6 chr17 29964990 29965156 -55473324 - MER104 DNA MER2_type -3 177 2 4960 124 94 85 chr17 29966059 29966317 -55472163 + Tigger3b DNA MER2_type 2 256 -2772 2092 101 3 7 chr17 29966317 29966604 -55471876 - AluSx SINE Alu -26 286 1 4960 124 94 85 chr17 29966604 29967563 -55470917 + Tigger3b DNA MER2_type 256 1230 -1 261 335 126 62 chr17 29968129 29968418 -55470062 + L3 LINE CR1 839 1153 -424 2072 131 0 10 chr17 29968418 29968730 -55469750 - AluSx SINE Alu -3 309 1 261 335 126 62 chr17 29968730 29968765 -55469715 + L3 LINE CR1 1153 1184 -393 517 305 7 13 chr17 29968773 29968924 -55469556 - L2 LINE L2 -1 3312 3163 186 359 68 34 chr17 29968921 29969038 -55469442 + MIR SINE MIR 21 141 -67 * 1438 160 26 59 chr17 29969083 29969390 -55469090 + AluSx SINE Alu 1 297 -15 459 271 48 32 chr17 29969438 29969626 -55468854 + L3 LINE CR1 1216 1406 -171 1207 155 9 40 chr17 29969814 29970040 -55468440 + MER20 DNA MER1_type 1 219 0 2133 122 0 0 chr17 29970116 29970420 -55468060 - AluSq SINE Alu -7 306 3 270 273 23 11 chr17 29970477 29970565 -55467915 + L2 LINE L2 3162 3250 -22 21 0 0 0 chr17 29972186 29972207 -55466273 + AT_rich Low_complexity Low_complexity 1 21 0 440 187 37 90 chr17 29976350 29976484 -55461996 + MER20B DNA MER1_type 59 185 -598 2021 149 0 0 chr17 29978861 29979163 -55459317 - AluSx SINE Alu -10 302 1 8646 216 59 35 chr17 29979461 29980098 -55458382 + L1MC4a LINE L1 2658 3278 -2868 1853 150 0 14 chr17 29980098 29980384 -55458096 + AluSx SINE Alu 1 282 -30 8646 216 59 35 chr17 29980384 29981670 -55456810 + L1MC4a LINE L1 3278 4661 -1485 2356 73 0 7 chr17 29981670 29981971 -55456509 + AluY SINE Alu 1 299 -12 8646 216 59 35 chr17 29981971 29982626 -55455854 + L1MC4a LINE L1 4661 5299 -847 2726 136 55 103 chr17 29983000 29983632 -55454848 + L1MB3 LINE L1 5572 6173 -10 24 0 0 0 chr17 29984340 29984364 -55454116 + AT_rich Low_complexity Low_complexity 1 24 0 6142 121 39 6 chr17 29984373 29985309 -55453171 - L1MA5A LINE L1 -32 6265 5292 221 0 0 33 chr17 29985309 29985339 -55453141 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 6142 121 39 6 chr17 29985339 29985464 -55453016 - L1MA5A LINE L1 -1005 5292 5173 606 175 8 42 chr17 29985537 29985657 -55452823 + FLAM_A SINE Alu 1 116 -17 651 215 128 29 chr17 29985725 29985897 -55452583 - MER5A DNA MER1_type 0 189 1 5396 71 24 12 chr17 29986079 29986836 -55451644 + MER4E LTR ERV1 1 766 0 355 261 73 24 chr17 29987008 29987190 -55451290 + L1P4 LINE L1 5262 5450 -716 1653 228 55 7 chr17 29987297 29987701 -55450779 - L1ME1 LINE L1 -82 6084 5662 919 99 7 0 chr17 29987934 29988076 -55450404 - L1MA9 LINE L1 0 6312 6170 625 335 52 24 chr17 29988109 29988568 -55449912 + L1MC4a LINE L1 5435 5906 -1902 1152 132 11 5 chr17 29988724 29988913 -55449567 - AluSg/x SINE Alu -2 308 119 2328 82 3 3 chr17 29988948 29989251 -55449229 + AluSp SINE Alu 1 303 -10 1286 166 35 35 chr17 29989352 29989636 -55448844 + L1MB7 LINE L1 5885 6168 -16 3504 70 0 0 chr17 29989991 29990435 -55448045 - MLT2A1 LTR ERVL 0 444 1 23060 63 21 8 chr17 29990435 29991515 -55446965 - HERVL-A1 LTR ERVL 0 5654 4590 2236 91 7 0 chr17 29991515 29991812 -55446668 + AluSc SINE Alu 1 299 -10 23060 63 21 8 chr17 29991812 29993681 -55444799 - HERVL-A1 LTR ERVL -1064 4590 2664 7687 60 3 26 chr17 29993676 29994332 -55444148 - HERVL-A1 LTR ERVL -4671 983 356 * 2626 29 7 3 chr17 29994332 29994642 -55443838 - AluY SINE Alu 0 311 1 7687 60 3 26 chr17 29994642 29994991 -55443489 - HERVL-A1 LTR ERVL -5298 356 1 3383 63 16 2 chr17 29994995 29995423 -55443057 - MLT2A1 LTR ERVL -8 436 3 188 362 59 53 chr17 29995527 29995679 -55442801 - L3 LINE CR1 -31 1546 1394 3884 64 8 0 chr17 29997861 29998364 -55440116 - L1P LINE L1 -1598 4548 4042 1481 140 54 29 chr17 29998833 29999148 -55439332 - MER33 DNA MER1_type -1 323 1 1026 233 18 9 chr17 29999157 29999376 -55439104 - MER58A DNA MER1_type -1 223 3 560 235 80 19 chr17 30001630 30001792 -55436688 + MIR SINE MIR 41 212 -50 369 0 0 0 chr17 30002596 30002637 -55435843 + (CA)n Simple_repeat Simple_repeat 2 42 0 715 224 63 44 chr17 30004025 30004230 -55434250 - MER3 DNA MER1_type 0 209 1 937 198 24 51 chr17 30004727 30005069 -55433411 - L1MB8 LINE L1 -22 6161 5845 1764 178 7 3 chr17 30007782 30008086 -55430394 + MER2 DNA MER2_type 41 345 0 234 0 0 0 chr17 30008321 30008347 -55430133 + (T)n Simple_repeat Simple_repeat 1 26 0 247 204 0 19 chr17 30009515 30009569 -55428911 + L2 LINE L2 3217 3269 -3 543 266 90 17 chr17 30010163 30010340 -55428140 + L2 LINE L2 2762 2951 -363 991 128 36 8 chr17 30010341 30010531 -55427949 - L1MB1 LINE L1 -1 6167 6003 2321 75 16 10 chr17 30010669 30010977 -55427503 + AluY SINE Alu 1 310 -1 2002 118 0 37 chr17 30012732 30013028 -55425452 - AluSx SINE Alu -27 285 1 251 281 0 0 chr17 30013224 30013281 -55425199 + L2 LINE L2 3257 3313 0 1691 179 10 16 chr17 30013547 30013854 -55424626 - AluSx SINE Alu -7 305 1 3413 187 101 103 chr17 30014179 30014730 -55423750 + L1MCa LINE L1 32 582 -5844 2209 107 3 3 chr17 30014730 30015030 -55423450 + AluY SINE Alu 1 300 -11 3413 187 101 103 chr17 30015030 30015881 -55422599 + L1MCa LINE L1 582 3463 -2963 5857 94 29 25 chr17 30015909 30016040 -55422440 - L1MA3 LINE L1 0 6305 6176 2248 103 0 3 chr17 30016040 30016341 -55422139 - AluSq SINE Alu -13 300 1 5857 94 29 25 chr17 30016341 30017149 -55421331 - L1MA3 LINE L1 -129 6176 5362 2120 133 0 0 chr17 30017161 30017455 -55421025 - AluSx SINE Alu -18 294 1 21463 120 46 44 chr17 30017455 30018583 -55419897 - L1 LINE L1 -3845 3720 2596 649 109 0 0 chr17 30018583 30018684 -55419796 - AluSp/q SINE Alu -3 310 210 21463 120 46 44 chr17 30018684 30019458 -55419022 - L1 LINE L1 -4969 2596 1825 264 30 0 0 chr17 30019458 30019491 -55418989 + (TG)n Simple_repeat Simple_repeat 2 34 0 21463 120 46 44 chr17 30019491 30021179 -55417301 - L1 LINE L1 -5740 1825 16 3876 181 54 14 chr17 30021638 30022360 -55416120 - MER21B LTR ERV1 -109 754 4 256 294 15 0 chr17 30022439 30022507 -55415973 + L2 LINE L2 3237 3305 -8 392 301 138 8 chr17 30022771 30022894 -55415586 - L2 LINE L2 -12 3260 3122 419 342 25 13 chr17 30022989 30023147 -55415333 - MIR SINE MIR -89 173 14 2270 94 3 3 chr17 30023192 30023489 -55414991 + AluSc SINE Alu 1 297 -12 661 279 172 0 chr17 30023883 30024145 -55414335 + L1ME3A LINE L1 5577 5883 -287 2175 106 3 0 chr17 30024198 30024480 -55414000 + AluSp SINE Alu 1 283 -30 1980 129 42 0 chr17 30024809 30025096 -55413384 - AluSx SINE Alu -9 303 5 276 292 56 11 chr17 30028024 30028113 -55410367 + L2 LINE L2 3200 3292 -21 222 118 0 0 chr17 30028118 30028152 -55410328 + (TGGA)n Simple_repeat Simple_repeat 1 34 0 28 0 0 0 chr17 30028253 30028281 -55410199 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr17 30028398 30028427 -55410053 + AT_rich Low_complexity Low_complexity 1 29 0 1899 131 25 45 chr17 30030261 30030575 -55407905 + AluJo SINE Alu 1 308 -4 24 67 0 0 chr17 30030627 30030672 -55407808 + AT_rich Low_complexity Low_complexity 1 45 0 21 36 0 0 chr17 30031024 30031052 -55407428 + AT_rich Low_complexity Low_complexity 1 28 0 417 104 15 0 chr17 30032080 30032147 -55406333 + HY3 scRNA scRNA 30 97 -4 26 30 0 0 chr17 30032302 30032335 -55406145 + AT_rich Low_complexity Low_complexity 1 33 0 2038 101 25 4 chr17 30032412 30032716 -55405764 - AluSx SINE Alu 0 310 1 28 86 0 0 chr17 30035067 30035137 -55403343 + AT_rich Low_complexity Low_complexity 1 70 0 26 0 0 0 chr17 30035577 30035603 -55402877 + AT_rich Low_complexity Low_complexity 1 26 0 232 248 114 38 chr17 30035932 30036037 -55402443 + MIR SINE MIR 100 212 -50 337 308 131 8 chr17 30036276 30036406 -55402074 + MIR3 SINE MIR 38 183 -25 441 0 0 0 chr17 30237400 30237449 -55201031 + (TTTTG)n Simple_repeat Simple_repeat 1 49 0 414 309 15 0 chr17 30237521 30237722 -55200758 - AluSc SINE Alu -105 204 1 2178 103 0 0 chr17 30237774 30238088 -55200392 + AluSg SINE Alu 1 314 0 250 287 16 90 chr17 30238102 30238224 -55200256 + MER5B DNA MER1_type 66 178 0 509 294 87 16 chr17 30238577 30238761 -55199719 - MIR SINE MIR -34 228 32 * 1081 261 194 36 chr17 30238736 30239581 -55198899 + L2 LINE L2 2333 3292 -21 276 30 0 0 chr17 30239585 30239618 -55198862 + (TGAA)n Simple_repeat Simple_repeat 1 33 0 539 338 89 18 chr17 30239945 30240170 -55198310 + MIR SINE MIR 21 261 -1 238 288 0 38 chr17 30240755 30240835 -55197645 - MIR3 SINE MIR -28 180 104 660 249 58 23 chr17 30241075 30241248 -55197232 + MIR SINE MIR 70 248 -14 1950 151 3 0 chr17 30241249 30241560 -55196920 + AluJb SINE Alu 1 312 0 209 209 0 0 chr17 30241646 30241689 -55196791 - MIR SINE MIR -109 153 111 248 217 0 0 chr17 30242551 30242597 -55195883 - L2 LINE L2 -13 3300 3255 1051 316 55 16 chr17 30242599 30243032 -55195448 + L2 LINE L2 2852 3301 -12 261 0 0 0 chr17 30243183 30243212 -55195268 + (T)n Simple_repeat Simple_repeat 1 29 0 268 300 45 0 chr17 30244223 30244333 -55194147 + LTR67 LTR ERVL 439 553 -4 206 260 82 14 chr17 30244352 30244425 -55194055 - L2 LINE L2 -50 3222 3145 806 292 58 53 chr17 30244930 30245290 -55193190 - L2 LINE L2 0 3313 2952 267 79 0 0 chr17 30245933 30245971 -55192509 + (CA)n Simple_repeat Simple_repeat 1 38 0 226 122 0 24 chr17 30246816 30246857 -55191623 + (TG)n Simple_repeat Simple_repeat 1 40 0 201 180 20 20 chr17 30247225 30247275 -55191205 + (TTCA)n Simple_repeat Simple_repeat 3 52 0 398 314 26 26 chr17 30247530 30247686 -55190794 + MIR SINE MIR 97 252 -10 246 381 0 0 chr17 30248377 30248461 -55190019 + MIR SINE MIR 154 237 -25 244 279 75 125 chr17 30248576 30249056 -55189424 + L2 LINE L2 2352 2807 -507 1330 211 52 36 chr17 30249269 30249634 -55188846 + MSTD LTR MaLR 1 371 -25 4322 222 20 46 chr17 30249641 30250671 -55187809 + MSTD-int LTR MaLR 2 1005 -730 305 317 16 8 chr17 30250774 30250897 -55187583 + MIR SINE MIR 136 259 -3 280 353 17 17 chr17 30250901 30251020 -55187460 - MIR SINE MIR -124 138 20 383 314 121 29 chr17 30252126 30252365 -55186115 - L3 LINE CR1 -7 1570 1310 238 208 21 21 chr17 30252548 30252596 -55185884 + MIR SINE MIR 32 79 -129 975 346 122 22 chr17 30252667 30253617 -55184863 + L2 LINE L2 2228 3272 0 818 222 68 11 chr17 30254141 30254317 -55184163 + MER5A DNA MER1_type 1 186 -3 295 320 125 30 chr17 30254341 30254541 -55183939 + MIR SINE MIR 31 249 -13 674 310 58 4 chr17 30255057 30255283 -55183197 + MIR SINE MIR 8 245 -17 1938 120 10 13 chr17 30255571 30255871 -55182609 + AluSx SINE Alu 1 299 -13 386 294 48 55 chr17 30255889 30256035 -55182445 - L2 LINE L2 0 3272 3128 688 247 237 23 chr17 30256045 30256349 -55182131 + MLT1I LTR MaLR 41 409 0 249 368 24 16 chr17 30257102 30257352 -55181128 + L2 LINE L2 2494 2745 -569 655 297 106 43 chr17 30257455 30257785 -55180695 + L2 LINE L2 2899 3254 -18 1677 145 16 36 chr17 30257785 30258089 -55180391 - AluJb SINE Alu -14 298 1 655 297 106 43 chr17 30258089 30258108 -55180372 + L2 LINE L2 3254 3270 -2 239 261 0 68 chr17 30258126 30258214 -55180266 - MIR SINE MIR -71 191 110 199 286 0 0 chr17 30259253 30259295 -55179185 - L2 LINE L2 -16 3256 3215 225 205 0 0 chr17 30259503 30259542 -55178938 - Charlie4 DNA MER1_type -1920 41 3 958 163 37 5 chr17 30259553 30259743 -55178737 + L1MA8 LINE L1 6091 6286 -5 510 258 16 8 chr17 30259888 30260012 -55178468 - L2 LINE L2 -2 3311 3187 187 221 247 13 chr17 30260019 30260096 -55178384 - L2 LINE L2 -241 3031 2937 25 0 0 0 chr17 30260783 30260808 -55177672 + AT_rich Low_complexity Low_complexity 1 25 0 474 332 79 5 chr17 30261030 30261220 -55177260 - MIR SINE MIR -6 256 53 392 306 34 27 chr17 30262607 30262754 -55175726 + MIR SINE MIR 22 169 -93 932 212 103 87 chr17 30262861 30263286 -55175194 - MLT1C LTR MaLR -23 444 13 1406 279 72 21 chr17 30263321 30263805 -55174675 - L2 LINE L2 -398 2916 2408 486 260 26 35 chr17 30264493 30264649 -55173831 - MIR SINE MIR -54 154 15 602 322 24 15 chr17 30265365 30265570 -55172910 + MIR SINE MIR 56 262 0 319 304 11 11 chr17 30265590 30265682 -55172798 - MIR SINE MIR -55 153 62 1687 229 73 42 chr17 30266907 30267457 -55171023 + L1ME1 LINE L1 114 680 -5716 308 120 0 20 chr17 30267468 30267518 -55170962 - MER58A DNA MER1_type 0 224 176 9117 88 19 23 chr17 30267518 30267620 -55170860 + HSMAR1 DNA Mariner 1 102 -1185 1881 144 0 10 chr17 30267620 30267919 -55170561 - AluSx SINE Alu -16 296 1 9117 88 19 23 chr17 30267919 30269102 -55169378 + HSMAR1 DNA Mariner 102 1280 -7 757 234 5 43 chr17 30269105 30269289 -55169191 - MER58A DNA MER1_type -47 177 1 3192 239 68 49 chr17 30269290 30270643 -55167837 + L1ME1 LINE L1 687 2065 -4331 808 200 42 36 chr17 30270663 30270828 -55167652 + MER20 DNA MER1_type 54 219 0 1438 217 91 28 chr17 30270830 30271472 -55167008 + L1ME1 LINE L1 2059 2689 -3526 * 2433 228 41 36 chr17 30271470 30272267 -55166213 + L1ME1 LINE L1 4107 4907 -1308 2857 221 18 53 chr17 30272272 30273085 -55165395 + L1ME1 LINE L1 5463 6403 0 504 158 0 0 chr17 30273099 30273194 -55165286 + GA-rich Low_complexity Low_complexity 3 97 0 357 227 23 23 chr17 30273374 30273462 -55165018 - MLT1L LTR MaLR -337 278 191 208 306 28 14 chr17 30273561 30273633 -55164847 + CT-rich Low_complexity Low_complexity 3 75 0 1430 110 0 31 chr17 30273725 30274044 -55164436 + AluSq SINE Alu 64 375 0 547 236 70 85 chr17 30274998 30275257 -55163223 + LTR16C LTR ERVL 26 280 -211 384 238 40 10 chr17 30275280 30275381 -55163099 - MER5A DNA MER1_type -77 112 9 368 283 98 15 chr17 30275384 30275589 -55162891 + LTR16C LTR ERVL 270 491 0 180 343 35 56 chr17 30275735 30275878 -55162602 + L2 LINE L2 2919 3058 -214 199 327 0 65 chr17 30275927 30276034 -55162446 + MIR SINE MIR 114 213 -49 361 287 74 0 chr17 30276912 30277020 -55161460 + MIR SINE MIR 71 186 -76 25 0 0 0 chr17 30277109 30277134 -55161346 + AT_rich Low_complexity Low_complexity 1 25 0 337 277 66 18 chr17 30277281 30277391 -55161089 - MIR SINE MIR -62 146 37 181 371 9 35 chr17 30277456 30277572 -55160908 + MIR SINE MIR 63 175 -87 271 339 161 0 chr17 30277769 30277881 -55160599 - MIR SINE MIR -113 149 20 363 44 0 0 chr17 30277903 30277948 -55160532 + (ATG)n Simple_repeat Simple_repeat 2 46 0 407 208 77 174 chr17 30278602 30278809 -55159671 + MIR3 SINE MIR 22 208 0 336 256 0 13 chr17 30278850 30278928 -55159552 + MIR SINE MIR 2 78 -184 1999 287 68 20 chr17 30278940 30279601 -55158879 + MER115 DNA AcHobo 1 693 0 245 329 0 12 chr17 30279604 30279689 -55158791 + MIR SINE MIR 90 173 -89 1814 147 3 10 chr17 30279689 30279988 -55158492 + AluJb SINE Alu 6 302 -10 372 335 43 22 chr17 30281064 30281249 -55157231 + MIR SINE MIR 50 238 -24 369 218 72 100 chr17 30281496 30281766 -55156714 + L2 LINE L2 2780 3048 -224 186 343 30 0 chr17 30281866 30281933 -55156547 + L2 LINE L2 3194 3262 -10 1997 226 148 35 chr17 30281940 30282955 -55155525 + L2 LINE L2 2170 3312 -1 2673 139 4 88 chr17 30283019 30283401 -55155079 + MER66A LTR ERV1 8 338 -140 1455 179 50 17 chr17 30283401 30283703 -55154777 + AluJb SINE Alu 1 312 0 2673 139 4 88 chr17 30283703 30283830 -55154650 + MER66A LTR ERV1 338 474 -4 767 239 62 112 chr17 30286255 30286756 -55151724 + MLT1K LTR MaLR 1 476 0 580 204 13 57 chr17 30286619 30286776 -55151704 + MLT1K LTR MaLR 439 588 0 243 296 15 22 chr17 30287136 30287271 -55151209 - MER103 DNA DNA -31 135 2 189 367 166 0 chr17 30288058 30288197 -55150283 - MIR SINE MIR -54 208 47 213 282 122 38 chr17 30288628 30288759 -55149721 + MIR SINE MIR 12 153 -109 251 274 48 57 chr17 30288809 30288933 -55149547 - L2 LINE L2 -8 3305 3183 244 261 0 15 chr17 30289030 30289095 -55149385 - MIR SINE MIR -108 154 91 267 324 20 29 chr17 30289146 30289248 -55149232 - MIR SINE MIR -56 206 106 1470 248 137 20 chr17 30289333 30289772 -55148708 + LTR16C LTR ERVL 1 490 -1 871 283 138 40 chr17 30290113 30290409 -55148071 + L2 LINE L2 2844 3196 -117 231 61 0 0 chr17 30290409 30290442 -55148038 + (TTA)n Simple_repeat Simple_repeat 1 33 0 871 283 138 40 chr17 30290442 30290572 -55147908 + L2 LINE L2 3196 3312 -1 321 311 0 9 chr17 30290620 30290726 -55147754 + LTR16C LTR ERVL 311 415 -76 278 306 82 0 chr17 30290803 30290901 -55147579 - MIR SINE MIR -152 110 5 1209 173 28 5 chr17 30291165 30291379 -55147101 - MER20 DNA MER1_type 0 219 1 252 341 132 0 chr17 30291382 30291473 -55147007 + L2 LINE L2 3199 3301 -12 206 136 23 0 chr17 30291484 30291528 -55146952 + (TGAA)n Simple_repeat Simple_repeat 4 48 0 586 293 89 16 chr17 30293009 30293200 -55145280 - MER63A DNA MER1_type 0 210 6 405 330 96 14 chr17 30293670 30293879 -55144601 - MIR SINE MIR -17 245 20 2083 179 97 26 chr17 30293902 30294365 -55144115 + MLT1D LTR MaLR 2 497 -8 318 248 76 48 chr17 30294647 30294752 -55143728 + MIR3 SINE MIR 9 116 -92 562 245 194 0 chr17 30296380 30296519 -55141961 - MER5A DNA MER1_type -8 181 16 365 373 45 0 chr17 30296585 30296786 -55141694 - MIR SINE MIR -17 245 36 452 288 109 24 chr17 30296840 30297465 -55141015 + L1ME4a LINE L1 5342 6040 -81 2361 41 7 7 chr17 30297506 30297801 -55140679 - AluY SINE Alu -16 295 1 343 289 88 66 chr17 30298424 30298832 -55139648 - L2 LINE L2 -429 2885 2469 427 273 203 12 chr17 30299424 30299639 -55138841 + MIR SINE MIR 1 252 -10 183 263 0 0 chr17 30300491 30300529 -55137951 + L2 LINE L2 3217 3254 -18 181 288 51 59 chr17 30301089 30301207 -55137273 - MIR SINE MIR -6 256 140 290 324 56 0 chr17 30301259 30301367 -55137113 - MIR SINE MIR -37 225 112 553 249 220 22 chr17 30302014 30302287 -55136193 - L3 LINE CR1 -96 1481 1155 533 270 69 37 chr17 30302312 30302503 -55135977 + MIR SINE MIR 30 226 -36 1701 144 7 18 chr17 30302622 30302934 -55135546 + AluJb SINE Alu 1 309 0 293 262 12 12 chr17 30303000 30303084 -55135396 + MIR SINE MIR 53 136 -72 21 0 0 0 chr17 30303144 30303165 -55135315 + AT_rich Low_complexity Low_complexity 1 21 0 1843 164 67 15 chr17 30304031 30304434 -55134046 + L1MB8 LINE L1 5754 6177 -1 2205 100 6 3 chr17 30305015 30305326 -55133154 - AluSx SINE Alu 0 312 1 183 100 0 0 chr17 30305522 30305552 -55132928 + (TAAAA)n Simple_repeat Simple_repeat 1 30 0 599 304 145 19 chr17 30305718 30306237 -55132243 + L2 LINE L2 2712 3313 0 243 245 0 0 chr17 30307038 30307091 -55131389 + (CA)n Simple_repeat Simple_repeat 1 53 0 210 91 0 0 chr17 30307888 30307921 -55130559 + (TGAA)n Simple_repeat Simple_repeat 2 34 0 244 242 16 0 chr17 30308536 30308598 -55129882 + L1MB5 LINE L1 5711 5773 -469 950 198 62 5 chr17 30308628 30308820 -55129660 + MIR SINE MIR 58 260 -2 273 339 91 0 chr17 30309598 30309763 -55128717 - MER115 DNA AcHobo -475 218 39 192 315 74 0 chr17 30310217 30310271 -55128209 - L2 LINE L2 -5 3267 3210 1501 202 17 38 chr17 30310330 30310676 -55127804 + MLT1A2 LTR MaLR 5 343 -31 318 26 0 0 chr17 30310685 30310724 -55127756 + (GTATG)n Simple_repeat Simple_repeat 3 41 0 250 267 0 89 chr17 30311227 30311328 -55127152 + L2 LINE L2 3222 3313 0 1105 164 44 103 chr17 30311411 30311752 -55126728 - MER33 DNA MER1_type 0 324 4 972 278 13 0 chr17 30312266 30312500 -55125980 - MIR SINE MIR -21 241 5 803 184 6 25 chr17 30312808 30312971 -55125509 + L1MB5 LINE L1 6015 6174 0 200 194 0 0 chr17 30313908 30313944 -55124536 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 299 257 55 37 chr17 30314348 30314457 -55124023 + MIR3 SINE MIR 78 188 -20 * 483 268 105 52 chr17 30314454 30314607 -55123873 + L3 LINE CR1 1414 1574 -3 294 290 51 56 chr17 30315102 30315275 -55123205 + MIR SINE MIR 3 172 -62 1191 244 56 95 chr17 30315834 30316131 -55122349 - L2 LINE L2 0 3313 3006 2026 79 4 0 chr17 30316131 30316397 -55122083 - AluSg SINE Alu -18 292 26 1541 140 0 0 chr17 30316403 30316653 -55121827 - AluSx SINE Alu 0 309 60 1191 244 56 95 chr17 30316653 30317050 -55121430 - L2 LINE L2 -312 3001 2623 248 266 137 24 chr17 30317413 30317537 -55120943 + MIR SINE MIR 123 260 -2 327 292 80 0 chr17 30317689 30317802 -55120678 - MIR SINE MIR -67 195 74 1827 95 73 4 chr17 30317802 30318076 -55120404 + AluSp SINE Alu 1 293 -20 1244 181 128 105 chr17 30318433 30318793 -55119687 - MLT1C LTR MaLR -10 457 84 1616 177 20 7 chr17 30318793 30319092 -55119388 + AluJo SINE Alu 1 303 -9 1244 181 128 105 chr17 30319092 30319178 -55119302 - MLT1C LTR MaLR -383 84 1 700 136 15 30 chr17 30319183 30319315 -55119165 - MLT1C-int LTR MaLR -5 1366 1237 1951 97 0 8 chr17 30319320 30319588 -55118892 + AluSc SINE Alu 22 287 -22 437 153 71 41 chr17 30319608 30319706 -55118774 - MLT1C-int LTR MaLR -97 1274 1174 1840 175 27 30 chr17 30320523 30320889 -55117591 + MLT1A1 LTR MaLR 1 365 0 240 130 0 0 chr17 30321608 30321654 -55116826 + (TG)n Simple_repeat Simple_repeat 2 47 0 288 0 0 0 chr17 30321875 30321907 -55116573 + (TG)n Simple_repeat Simple_repeat 1 32 0 520 276 146 31 chr17 30322249 30322503 -55115977 + Charlie2 DNA MER1_type 25 307 -2475 790 213 33 5 chr17 30322646 30322857 -55115623 + Charlie2a DNA MER1_type 1465 1681 -1181 253 319 88 11 chr17 30322993 30323084 -55115396 + MIR3 SINE MIR 75 172 -36 388 280 16 24 chr17 30323863 30323988 -55114492 + LTR67 LTR ERVL 432 555 -2 747 112 22 0 chr17 30323988 30324122 -55114358 + (TCCA)n Simple_repeat Simple_repeat 4 140 0 481 295 88 12 chr17 30324365 30324595 -55113885 - MIR SINE MIR -7 255 11 413 263 79 0 chr17 30324618 30324732 -55113748 + MIR3 SINE MIR 83 205 -3 228 303 56 87 chr17 30324816 30325011 -55113469 - L1MEd LINE L1 -5510 609 421 1067 103 0 6 chr17 30325297 30325471 -55113009 + (TTCC)n Simple_repeat Simple_repeat 3 175 0 231 319 36 72 chr17 30326023 30326189 -55112291 + L2 LINE L2 2600 2759 -555 476 358 144 5 chr17 30326527 30326742 -55111738 - MIR SINE MIR -14 248 4 2091 303 48 36 chr17 30326799 30328118 -55110362 + L2 LINE L2 1972 3311 -2 529 178 0 22 chr17 30328276 30328411 -55110069 + (CAT)n Simple_repeat Simple_repeat 3 134 0 361 275 73 39 chr17 30328419 30328597 -55109883 - MIR SINE MIR 0 262 79 537 192 96 0 chr17 30329347 30329451 -55109029 - MIR SINE MIR -66 196 83 441 274 85 52 chr17 30329577 30329789 -55108691 - MIR SINE MIR -10 252 34 317 233 44 22 chr17 30329794 30329884 -55108596 + MIR SINE MIR 75 166 -96 355 290 65 32 chr17 30329987 30330111 -55108369 - MIR SINE MIR -59 149 22 488 260 8 39 chr17 30330314 30330441 -55108039 + MER5B DNA MER1_type 50 172 -6 281 248 171 54 chr17 30330456 30330585 -55107895 - MIR3 SINE MIR -59 149 6 292 309 0 0 chr17 30331213 30331297 -55107183 + MIR SINE MIR 35 118 -90 181 244 0 0 chr17 30331499 30331544 -55106936 - L2 LINE L2 -303 2969 2925 326 259 12 12 chr17 30331813 30331894 -55106586 + L2 LINE L2 3191 3271 -1 277 253 10 30 chr17 30331914 30332013 -55106467 + (TGAA)n Simple_repeat Simple_repeat 3 99 0 380 267 200 67 chr17 30332675 30332825 -55105655 + MER5A DNA MER1_type 14 183 -6 206 333 0 0 chr17 30332917 30332971 -55105509 - L2 LINE L2 -257 3056 3003 438 222 114 30 chr17 30333007 30333170 -55105310 + MIR SINE MIR 14 184 -67 412 339 38 35 chr17 30333690 30333979 -55104501 + L2 LINE L2 2904 3193 -120 793 153 174 0 chr17 30334049 30334193 -55104287 + AluJb SINE Alu 130 298 -14 209 280 31 10 chr17 30334193 30334282 -55104198 - MER5A DNA MER1_type -60 129 26 222 37 0 0 chr17 30334409 30334436 -55104044 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 281 295 31 70 chr17 30334481 30334610 -55103870 - L2 LINE L2 -9 3263 3140 784 214 7 0 chr17 30335295 30335449 -55103031 + AluJo SINE Alu 1 155 -157 374 225 180 0 chr17 30335515 30335626 -55102854 + MIR SINE MIR 105 235 -27 246 249 21 107 chr17 30336796 30336946 -55101534 + MIR SINE MIR 55 191 -71 248 169 17 51 chr17 30337457 30337516 -55100964 + MIR3 SINE MIR 115 171 -37 * 295 336 0 48 chr17 30337491 30337616 -55100864 - MIR3 SINE MIR -75 133 15 1453 178 22 70 chr17 30337852 30338135 -55100345 - MLT1D LTR MaLR -2 503 208 375 60 0 0 chr17 30338135 30338185 -55100295 + (TG)n Simple_repeat Simple_repeat 1 50 0 1453 178 22 70 chr17 30338185 30338199 -55100281 - MLT1D LTR MaLR -297 208 195 2019 117 4 0 chr17 30338199 30338463 -55100017 - AluSq SINE Alu -48 265 1 1453 178 22 70 chr17 30338463 30338711 -55099769 - MLT1D LTR MaLR -310 195 5 624 183 32 32 chr17 30339003 30339129 -55099351 + MER5A DNA MER1_type 8 133 -56 266 283 35 71 chr17 30339311 30339424 -55099056 + MIR3 SINE MIR 5 113 -95 379 268 105 7 chr17 30339630 30339783 -55098697 + MIR SINE MIR 84 251 -11 194 209 0 0 chr17 30339749 30339792 -55098688 + L2 LINE L2 3222 3264 -8 * 368 269 120 23 chr17 30340325 30340454 -55098026 + MIR SINE MIR 2 139 -69 223 103 0 0 chr17 30340666 30340695 -55097785 + L2 LINE L2 3262 3290 -23 465 346 56 19 chr17 30341364 30341578 -55096902 + MIR SINE MIR 24 245 -17 394 235 0 0 chr17 30341632 30341713 -55096767 - MIR SINE MIR -3 259 179 681 330 80 42 chr17 30342159 30342611 -55095869 + L2 LINE L2 2804 3272 0 235 278 173 28 chr17 30342813 30343014 -55095466 - MIR SINE MIR -16 246 1 325 306 99 63 chr17 30344122 30344344 -55094136 - L2 LINE L2 -463 2851 2622 405 0 0 0 chr17 30344404 30344449 -55094031 + (CA)n Simple_repeat Simple_repeat 2 46 0 688 229 51 25 chr17 30344454 30344611 -55093869 - MIR SINE MIR -94 168 8 206 291 146 0 chr17 30345306 30345416 -55093064 + MIR SINE MIR 63 188 -74 180 0 0 0 chr17 30346650 30346670 -55091810 + (T)n Simple_repeat Simple_repeat 1 20 0 27 49 0 0 chr17 30347812 30347853 -55090627 + GC_rich Low_complexity Low_complexity 1 41 0 192 125 0 0 chr17 30347870 30347902 -55090578 + (CAG)n Simple_repeat Simple_repeat 3 34 0 34 42 0 0 chr17 30347960 30348008 -55090472 + GC_rich Low_complexity Low_complexity 1 48 0 31 26 0 0 chr17 30348971 30349009 -55089471 + GC_rich Low_complexity Low_complexity 1 38 0 270 248 31 37 chr17 30349492 30349653 -55088827 + (TG)n Simple_repeat Simple_repeat 2 161 0 398 192 11 50 chr17 30350260 30350442 -55088038 + (CATA)n Simple_repeat Simple_repeat 4 178 0 458 294 61 92 chr17 30351130 30351392 -55087088 + L2 LINE L2 2982 3235 -37 215 261 0 0 chr17 30351431 30351477 -55087003 - L2 LINE L2 -16 3297 3252 766 144 16 8 chr17 30351547 30351672 -55086808 - FLAM_C SINE Alu -6 127 2 560 242 72 87 chr17 30351793 30352057 -55086423 - MIR SINE MIR -1 261 2 207 0 0 0 chr17 30352356 30352379 -55086101 + (CCA)n Simple_repeat Simple_repeat 3 25 0 586 238 153 127 chr17 30352538 30352917 -55085563 - L3 LINE CR1 -10 1567 1179 1852 156 11 7 chr17 30353231 30353559 -55084921 + AluJb SINE Alu 1 329 0 228 343 15 15 chr17 30353622 30353756 -55084724 + CT-rich Low_complexity Low_complexity 1 134 0 5725 46 26 0 chr17 30353805 30354501 -55083979 - L1PA5 LINE L1 0 6154 5441 3554 45 2 0 chr17 30354501 30354964 -55083516 + L1P LINE L1 4363 4826 -1320 382 301 70 21 chr17 30355559 30355702 -55082778 - MIR3 SINE MIR -48 160 11 228 286 184 0 chr17 30356418 30356516 -55081964 - MIR3 SINE MIR -7 201 86 230 239 104 0 chr17 30356560 30356627 -55081853 - MIR SINE MIR -2 260 187 294 29 0 0 chr17 30356630 30356665 -55081815 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 1664 164 0 42 chr17 30356682 30356968 -55081512 - AluJb SINE Alu -38 274 1 513 246 169 0 chr17 30356972 30357114 -55081366 - MIR SINE MIR -66 196 31 263 364 91 0 chr17 30357170 30357346 -55081134 - L2 LINE L2 -18 3295 3104 206 200 0 0 chr17 30358391 30358426 -55080054 + G-rich Low_complexity Low_complexity 3 37 0 284 297 148 0 chr17 30358450 30358551 -55079929 - MIR SINE MIR -30 232 117 442 213 41 57 chr17 30358665 30358787 -55079693 - MIR SINE MIR -109 153 34 249 228 21 28 chr17 30359220 30359365 -55079115 + CT-rich Low_complexity Low_complexity 2 145 0 376 237 47 89 chr17 30359560 30359750 -55078730 + L1ME LINE L1 5601 5782 -339 402 272 52 20 chr17 30361533 30361744 -55076736 - MIR SINE MIR -12 250 32 2505 44 14 0 chr17 30362625 30362918 -55075562 + AluY SINE Alu 1 297 -14 447 259 144 0 chr17 30363030 30363169 -55075311 - MIR SINE MIR -75 187 29 472 272 37 6 chr17 30363847 30364009 -55074471 - MER113 DNA MER1_type? -346 175 9 317 182 52 0 chr17 30364341 30364418 -55074062 - L1MC5 LINE L1 -36 7925 7845 519 224 8 0 chr17 30364459 30364577 -55073903 + MIR SINE MIR 32 149 -73 365 331 114 17 chr17 30365456 30365631 -55072849 + MIR3 SINE MIR 15 206 -2 458 266 209 42 chr17 30365989 30366495 -55071985 - L2 LINE L2 -1 3312 2892 769 153 22 51 chr17 30366495 30366632 -55071848 + FLAM_C SINE Alu 1 133 0 458 266 209 42 chr17 30366632 30366928 -55071552 - L2 LINE L2 -421 2892 2380 377 291 69 32 chr17 30367289 30367493 -55070987 - MIR SINE MIR -42 220 3 3139 246 51 59 chr17 30368378 30369065 -55069415 - L2 LINE L2 -2 3311 2640 1613 244 66 21 chr17 30369065 30369548 -55068932 - MLT1D LTR MaLR 0 505 1 3139 246 51 59 chr17 30369548 30370179 -55068301 - L2 LINE L2 -673 2640 2005 575 207 97 89 chr17 30370582 30370810 -55067670 + MIR SINE MIR 16 259 -3 285 278 26 70 chr17 30371101 30371216 -55067264 + MIR3 SINE MIR 51 160 -48 694 276 28 56 chr17 30371868 30371916 -55066564 - MIR SINE MIR 0 262 214 1809 180 7 0 chr17 30371916 30372211 -55066269 - AluJo SINE Alu -9 303 7 694 276 28 56 chr17 30372211 30372412 -55066068 - MIR SINE MIR -48 214 20 381 292 39 58 chr17 30372526 30372680 -55065800 - MIR SINE MIR -54 208 58 554 298 86 25 chr17 30373610 30373808 -55064672 - MIR SINE MIR -6 256 47 369 327 65 39 chr17 30375094 30375247 -55063233 + L2 LINE L2 2899 3055 -217 476 268 88 37 chr17 30375304 30375599 -55062881 + L1ME4a LINE L1 5810 6119 -2 2345 113 0 13 chr17 30375618 30375929 -55062551 - AluSx SINE Alu -5 307 1 317 212 8 91 chr17 30376434 30376566 -55061914 - L1MC4 LINE L1 0 8042 7922 414 337 149 19 chr17 30376695 30376956 -55061524 + L1MC4a LINE L1 5643 5937 -1871 2132 103 3 36 chr17 30377129 30377431 -55061049 + AluSx SINE Alu 1 292 -20 274 274 89 22 chr17 30377684 30377819 -55060661 + Charlie8 DNA MER1_type 84 227 -2190 447 320 13 28 chr17 30378020 30378174 -55060306 - MIR SINE MIR -58 150 16 681 300 17 35 chr17 30378399 30378629 -55059851 + MIR SINE MIR 33 258 -4 187 290 110 10 chr17 30378614 30378714 -55059766 - MIR SINE MIR -2 260 151 * 972 311 27 59 chr17 30378786 30379310 -55059170 - L2 LINE L2 -2 3311 2805 609 279 0 14 chr17 30379316 30379463 -55059017 - MIR SINE MIR -116 146 2 732 238 41 6 chr17 30380353 30380525 -55057955 - MER5A DNA MER1_type -3 186 9 1084 165 0 6 chr17 30380578 30380742 -55057738 + FRAM SINE Alu 1 159 -17 194 253 391 0 chr17 30381939 30382026 -55056454 - L2 LINE L2 -12 3260 3140 635 232 147 17 chr17 30382211 30382388 -55056092 - MIR SINE MIR -47 215 16 644 161 22 28 chr17 30382903 30383083 -55055397 + GA-rich Low_complexity Low_complexity 2 180 0 246 295 106 74 chr17 30383207 30383424 -55055056 - L2 LINE L2 -6 3307 3084 243 317 24 0 chr17 30383655 30383737 -55054743 + L2 LINE L2 3149 3232 -40 384 298 113 0 chr17 30384520 30384691 -55053789 + MIR SINE MIR 1 191 -68 193 222 0 0 chr17 30384802 30384838 -55053642 + L2 LINE L2 3251 3286 -27 942 278 20 12 chr17 30384892 30385137 -55053343 - MIR SINE MIR -12 250 4 260 310 35 35 chr17 30385231 30385344 -55053136 + MIR SINE MIR 29 141 -67 238 356 67 0 chr17 30385670 30385805 -55052675 + L2 LINE L2 2853 2996 -276 2438 66 16 3 chr17 30385821 30386141 -55052339 + L1PA10 LINE L1 5717 6040 -128 309 319 125 44 chr17 30387592 30387887 -55050593 + L2 LINE L2 2443 2761 -553 1935 158 6 10 chr17 30388305 30388688 -55049792 - AluSx SINE Alu 0 382 1 636 242 54 21 chr17 30388778 30388964 -55049516 + MIR SINE MIR 65 256 -6 335 324 27 0 chr17 30389087 30389198 -55049282 + L2 LINE L2 3182 3295 -18 203 289 0 19 chr17 30390223 30390275 -55048205 + polypyrimidine Low_complexity Low_complexity 2 52 0 280 244 0 22 chr17 30390611 30390701 -55047779 + CT-rich Low_complexity Low_complexity 3 90 0 386 266 117 0 chr17 30391329 30391457 -55047023 + MIR3 SINE MIR 30 172 -36 270 250 11 0 chr17 30391890 30391978 -55046502 + (TA)n Simple_repeat Simple_repeat 1 89 0 398 336 106 24 chr17 30392212 30392420 -55046060 - MIR SINE MIR -18 244 20 411 130 0 0 chr17 30392470 30392547 -55045933 + (TG)n Simple_repeat Simple_repeat 2 78 0 376 291 40 72 chr17 30393125 30393348 -55045132 + MIR SINE MIR 47 262 0 2098 126 0 3 chr17 30393732 30394018 -55044462 + AluSp SINE Alu 1 285 -28 1647 176 0 61 chr17 30394105 30394435 -55044045 + AluJo SINE Alu 1 310 -2 21 0 0 0 chr17 30395748 30395769 -55042711 + AT_rich Low_complexity Low_complexity 1 21 0 398 306 27 60 chr17 30396059 30396292 -55042188 + MIR SINE MIR 9 245 -17 599 322 13 25 chr17 30396921 30397157 -55041323 + MIR SINE MIR 22 254 -8 228 356 17 0 chr17 30397278 30397393 -55041087 + L2 LINE L2 2670 2786 -528 1167 107 0 0 chr17 30397518 30397667 -55040813 - AluSq/x SINE Alu -163 149 1 252 325 30 93 chr17 30398692 30398929 -55039551 - L2 LINE L2 -41 3231 3010 378 0 0 0 chr17 30398966 30399008 -55039472 + (TG)n Simple_repeat Simple_repeat 2 43 0 1509 143 143 0 chr17 30400076 30400320 -55038160 + AluSx SINE Alu 15 293 -19 1099 104 0 0 chr17 30400583 30400737 -55037743 - L1MA3 LINE L1 0 6305 6152 1199 155 0 0 chr17 30400739 30400913 -55037567 - AluJb SINE Alu -138 174 1 535 125 0 11 chr17 30400917 30401005 -55037475 - L1MA3 LINE L1 -165 6140 6054 250 297 36 9 chr17 30401509 30401620 -55036860 - MIR3 SINE MIR -48 160 47 872 262 61 0 chr17 30401993 30402222 -55036258 - L1ME3 LINE L1 -330 5832 5590 223 229 0 0 chr17 30402246 30402294 -55036186 + L2 LINE L2 3221 3268 -4 398 271 83 14 chr17 30402396 30402540 -55035940 - MIR3 SINE MIR -11 197 44 21 0 0 0 chr17 30402671 30402692 -55035788 + AT_rich Low_complexity Low_complexity 1 21 0 249 33 0 0 chr17 30403637 30403667 -55034813 + (TTCA)n Simple_repeat Simple_repeat 4 33 0 272 312 52 82 chr17 30403668 30403899 -55034581 - L2 LINE L2 -19 3253 3030 2450 224 32 76 chr17 30404140 30404514 -55033966 + L1ME3A LINE L1 5517 5849 -321 2168 97 4 4 chr17 30404514 30404793 -55033687 + AluSx SINE Alu 4 282 -30 2450 224 32 76 chr17 30404793 30405102 -55033378 + L1ME3A LINE L1 5849 6170 0 204 211 88 0 chr17 30405414 30405471 -55033009 + MIR SINE MIR 92 153 -109 460 326 67 71 chr17 30406169 30406201 -55032279 - L2 LINE L2 -52 3220 3189 234 0 0 0 chr17 30406201 30406227 -55032253 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 460 326 67 71 chr17 30406227 30407069 -55031411 - L2 LINE L2 -83 3189 2349 327 254 0 0 chr17 30407092 30407163 -55031317 - MIR SINE MIR -61 147 77 194 250 94 86 chr17 30407255 30407383 -55031097 - MIR SINE MIR -56 206 78 509 242 89 6 chr17 30407498 30407655 -55030825 + MIR SINE MIR 76 245 -17 193 233 164 14 chr17 30408598 30408671 -55029809 - L2 LINE L2 -29 3284 3201 1682 228 68 20 chr17 30408798 30409236 -55029244 + MLT1C LTR MaLR 1 459 -8 336 333 7 22 chr17 30410186 30410324 -55028156 + MIR SINE MIR 18 153 -55 225 270 16 0 chr17 30410550 30410613 -55027867 - MIR SINE MIR -58 150 87 305 265 61 61 chr17 30411580 30411712 -55026768 - MIR SINE MIR -111 151 20 222 310 110 28 chr17 30411845 30411990 -55026490 - MIR3 SINE MIR -5 203 47 * 269 260 32 84 chr17 30411984 30412037 -55026443 - MIR SINE MIR -36 226 172 2050 143 43 18 chr17 30412037 30412366 -55026114 + MER1B DNA MER1_type 1 337 0 269 260 32 84 chr17 30412366 30412466 -55026014 - MIR SINE MIR -90 172 81 527 296 101 5 chr17 30412750 30412949 -55025531 - MIR SINE MIR 0 262 45 495 314 6 23 chr17 30412969 30413144 -55025336 + MER5B DNA MER1_type 7 178 0 1387 212 5 19 chr17 30413298 30413635 -55024845 - MER33 DNA MER1_type 0 324 1 2332 116 0 0 chr17 30413681 30413991 -55024489 + AluSx SINE Alu 1 310 -2 748 282 166 15 chr17 30414257 30414732 -55023748 + L1ME4a LINE L1 5564 6110 -11 426 276 96 6 chr17 30415317 30415473 -55023007 - MIR SINE MIR -92 170 1 246 309 113 21 chr17 30416406 30416600 -55021880 - MIR SINE MIR -21 241 30 219 292 56 0 chr17 30416866 30416938 -55021542 - L2 LINE L2 -47 3225 3150 1079 215 18 4 chr17 30417343 30417571 -55020909 - MER96B DNA MER1_type? -186 231 1 336 320 61 7 chr17 30417591 30417738 -55020742 - MIR SINE MIR -19 243 89 217 295 0 0 chr17 30418276 30418337 -55020143 + MIR SINE MIR 20 80 -182 402 258 190 12 chr17 30418369 30418532 -55019948 - MIR SINE MIR -48 214 23 377 283 55 7 chr17 30418510 30418655 -55019825 + MIR SINE MIR 46 197 -65 * 224 286 0 0 chr17 30418653 30418709 -55019771 - L2 LINE L2 -4 3268 3213 * 238 240 217 8 chr17 30419491 30419620 -55018860 - L2 LINE L2 -212 3060 2905 630 175 34 160 chr17 30419655 30419848 -55018632 + MER106A DNA MER1_type 1 152 -84 1744 176 35 3 chr17 30419848 30420167 -55018313 + L1MB2 LINE L1 5840 6168 -3 630 175 34 160 chr17 30420167 30420241 -55018239 + MER106A DNA MER1_type 152 234 -2 800 202 150 0 chr17 30420372 30420565 -55017915 - MER58A DNA MER1_type -2 222 1 189 300 0 0 chr17 30421382 30421442 -55017038 + MIR SINE MIR 94 153 -109 248 269 0 0 chr17 30421512 30421564 -55016916 + L2 LINE L2 3205 3256 -16 581 224 125 0 chr17 30421895 30422047 -55016433 - MER96 DNA MER1_type -4 171 1 476 239 10 81 chr17 30422193 30422390 -55016090 - MER5A DNA MER1_type 0 189 7 303 192 0 0 chr17 30422404 30422456 -55016024 + MER94 DNA DNA 1 52 -82 1032 194 6 0 chr17 30422497 30422672 -55015808 + MER58A DNA MER1_type 47 222 -2 366 123 0 0 chr17 30423376 30423433 -55015047 + (TG)n Simple_repeat Simple_repeat 1 57 0 222 348 25 0 chr17 30423447 30423565 -55014915 + (TG)n Simple_repeat Simple_repeat 2 122 0 260 314 78 93 chr17 30424953 30425297 -55013183 + L2 LINE L2 2928 3266 -6 443 338 19 0 chr17 30425554 30425711 -55012769 + MIR SINE MIR 38 197 -65 400 324 34 14 chr17 30426330 30426478 -55012002 - L2 LINE L2 -3 3310 3160 513 236 40 29 chr17 30426836 30427010 -55011470 - L2 LINE L2 -586 2728 2553 2135 139 0 3 chr17 30427012 30427321 -55011159 + AluSx SINE Alu 1 308 -4 1211 294 253 38 chr17 30427642 30428887 -55009593 - L2 LINE L2 -948 2366 1391 1989 140 7 0 chr17 30428887 30429185 -55009295 + AluSx SINE Alu 2 301 0 1211 294 253 38 chr17 30429185 30429761 -55008719 - L2 LINE L2 -1923 1391 151 367 253 21 0 chr17 30430059 30430154 -55008326 - MER5A DNA MER1_type -84 105 9 902 264 52 8 chr17 30430160 30430410 -55008070 - Charlie8 DNA MER1_type -2156 261 1 2141 107 0 7 chr17 30431464 30431745 -55006735 + AluSx SINE Alu 1 279 -33 585 42 0 0 chr17 30431745 30431817 -55006663 + (GAAA)n Simple_repeat Simple_repeat 1 72 0 348 291 17 8 chr17 30432195 30432312 -55006168 + MIR SINE MIR 73 190 -72 275 315 119 13 chr17 30433115 30433350 -55005130 + L2 LINE L2 2101 2360 -954 187 278 0 19 chr17 30433587 30433641 -55004839 + MIR3 SINE MIR 133 185 -23 242 214 214 27 chr17 30434114 30434226 -55004254 + L2 LINE L2 3137 3269 -3 1818 172 13 17 chr17 30434438 30434740 -55003740 - AluJb SINE Alu -11 301 1 2480 117 20 6 chr17 30434988 30435346 -55003134 - THE1B LTR MaLR -1 363 1 192 302 226 34 chr17 30435413 30435767 -55002713 + L2 LINE L2 2556 2977 -337 1664 130 13 8 chr17 30436208 30436446 -55002034 + AluSx SINE Alu 56 294 -18 607 282 79 59 chr17 30436870 30437210 -55001270 - L2 LINE L2 0 3272 2926 212 325 108 48 chr17 30437316 30437482 -55000998 - MIR SINE MIR -38 224 49 236 163 0 0 chr17 30438097 30438140 -55000340 - MER5A DNA MER1_type 0 189 147 * 276 196 0 18 chr17 30438122 30438178 -55000302 + MER5A DNA MER1_type 100 154 -35 194 265 265 0 chr17 30438412 30438495 -54999985 - MIR SINE MIR -63 145 41 521 245 48 37 chr17 30438585 30438773 -54999707 + MLT1J2 LTR MaLR 11 200 -250 278 295 107 40 chr17 30438813 30438962 -54999518 + MLT1J2 LTR MaLR 290 448 -2 555 316 23 6 chr17 30438970 30439147 -54999333 + MER5A DNA MER1_type 7 186 -3 848 208 187 4 chr17 30439162 30439446 -54999034 + MER58 DNA MER1_type 3 2416 -4 243 200 88 125 chr17 30439984 30440144 -54998336 + MLT1J LTR MaLR 100 253 -258 914 237 48 99 chr17 30440718 30441132 -54997348 + MLT1J LTR MaLR 119 511 0 303 267 0 17 chr17 30441315 30441431 -54997049 - MER113 DNA MER1_type? -397 124 11 257 232 171 0 chr17 30441457 30441539 -54996941 + L2 LINE L2 3175 3270 -2 281 314 88 0 chr17 30442746 30442848 -54995632 - MIR SINE MIR -62 146 36 268 311 78 0 chr17 30443783 30443886 -54994594 + L2 LINE L2 3145 3255 -17 237 254 0 0 chr17 30444396 30444455 -54994025 - MIR SINE MIR -109 153 95 266 289 133 0 chr17 30445353 30445436 -54993044 + MIR3 SINE MIR 72 165 -43 1017 196 14 37 chr17 30445452 30445666 -54992814 + MER2 DNA MER2_type 2 210 -135 22 35 0 0 chr17 30445677 30445706 -54992774 + AT_rich Low_complexity Low_complexity 1 29 0 224 154 19 0 chr17 30445929 30445981 -54992499 + GA-rich Low_complexity Low_complexity 2 54 0 294 29 0 0 chr17 30447457 30447492 -54990988 + (TA)n Simple_repeat Simple_repeat 2 36 0 288 0 0 0 chr17 30447497 30447529 -54990951 + (TG)n Simple_repeat Simple_repeat 2 33 0 185 91 0 30 chr17 30447960 30447993 -54990487 + (TATATG)n Simple_repeat Simple_repeat 3 34 0 333 277 18 0 chr17 30447995 30448107 -54990373 - L1MC3 LINE L1 -1929 5856 5743 354 249 47 35 chr17 30448332 30448501 -54989979 + MIR3 SINE MIR 37 207 -1 347 315 235 7 chr17 30448562 30448851 -54989629 - L2 LINE L2 -20 3252 2898 436 301 39 0 chr17 30449604 30449757 -54988723 - MIR3 SINE MIR -2 206 48 2051 105 40 46 chr17 30449925 30450191 -54988289 + L1PA13 LINE L1 5794 6059 -104 2158 110 23 16 chr17 30450191 30450501 -54987979 + AluSx SINE Alu 1 312 0 2051 105 40 46 chr17 30450501 30450605 -54987875 + L1PA13 LINE L1 6059 6162 -1 952 279 89 58 chr17 30450683 30450733 -54987747 + HAL1b LINE L1 47 94 -1254 379 237 136 17 chr17 30450733 30450887 -54987593 + FLAM_A SINE Alu 1 133 0 952 279 89 58 chr17 30450887 30451591 -54986889 + HAL1b LINE L1 94 824 -524 2368 212 80 81 chr17 30451755 30452675 -54985805 + L1MC5 LINE L1 6480 7418 -543 1273 233 18 21 chr17 30452788 30453127 -54985353 + L1MB7 LINE L1 4604 4941 -1205 1149 211 110 36 chr17 30453207 30453592 -54984888 - MER39 LTR ERV1 -87 620 1 3695 209 52 42 chr17 30453592 30453849 -54984631 + L1MB7 LINE L1 4938 5191 -993 1704 180 20 23 chr17 30453849 30454155 -54984325 + AluJo SINE Alu 7 311 -1 3695 209 52 42 chr17 30454155 30455121 -54983359 + L1MB7 LINE L1 5191 6184 0 1916 149 24 3 chr17 30455969 30456264 -54982216 + AluJo SINE Alu 1 301 -11 316 228 43 169 chr17 30456305 30456489 -54981991 - LTR67 LTR ERVL -368 189 29 1932 119 48 10 chr17 30457299 30457592 -54980888 - AluSx SINE Alu -7 305 2 278 258 78 24 chr17 30457692 30457817 -54980663 - MLT1I LTR MaLR -26 406 285 1965 153 0 3 chr17 30457915 30458215 -54980265 - AluSx SINE Alu -13 299 1 329 259 52 43 chr17 30458245 30458361 -54980119 - MLT1J1 LTR MaLR -294 152 36 2130 119 0 26 chr17 30458985 30459287 -54979193 + AluSx SINE Alu 1 294 -18 1174 238 125 66 chr17 30459377 30459935 -54978545 - MLT1E LTR MaLR -2 591 1 373 275 67 13 chr17 30460064 30460213 -54978267 - MIR3 SINE MIR -11 197 41 196 326 41 20 chr17 30460457 30460555 -54977925 + L2 LINE L2 2119 2218 -1096 501 292 106 4 chr17 30460719 30460945 -54977535 - MIR SINE MIR -6 256 8 660 26 0 0 chr17 30461118 30461196 -54977284 + (TTCC)n Simple_repeat Simple_repeat 3 80 0 1794 169 7 13 chr17 30461217 30461519 -54976961 - AluSx SINE Alu -12 300 1 358 279 108 25 chr17 30462467 30462625 -54975855 + MIR SINE MIR 33 203 -59 608 304 45 12 chr17 30462804 30463062 -54975418 + MIR SINE MIR 1 261 -1 585 210 60 30 chr17 30463294 30463461 -54975019 - MER5B DNA MER1_type -5 173 2 357 150 0 14 chr17 30463573 30463684 -54974796 + MER96 DNA MER1_type? 1 164 -11 686 198 6 0 chr17 30463854 30464031 -54974449 + (TCCA)n Simple_repeat Simple_repeat 3 180 0 606 196 6 22 chr17 30464052 30464195 -54974285 + (TCCA)n Simple_repeat Simple_repeat 1 142 -34 2061 122 82 20 chr17 30464195 30464538 -54973942 - THE1B LTR MaLR 0 364 1 606 196 6 22 chr17 30464538 30464573 -54973907 + (TCCA)n Simple_repeat Simple_repeat 142 176 0 230 246 14 29 chr17 30464592 30464661 -54973819 - L2 LINE L2 -1 3312 3245 393 273 74 0 chr17 30465048 30465169 -54973311 - MIR3 SINE MIR -1 207 78 490 304 70 43 chr17 30465314 30465558 -54972922 - MIR SINE MIR -11 251 3 230 309 0 0 chr17 30466254 30466322 -54972158 + L2 LINE L2 3200 3267 -5 634 231 14 83 chr17 30466946 30467162 -54971318 + L2 LINE L2 3113 3313 0 599 216 6 0 chr17 30467322 30467484 -54970996 + (ATG)n Simple_repeat Simple_repeat 3 165 0 263 315 41 48 chr17 30467549 30467695 -54970785 - MIR SINE MIR -74 188 45 1001 272 44 26 chr17 30469784 30470126 -54968354 - MLT1I LTR MaLR -52 357 10 4227 98 12 2 chr17 30471123 30471715 -54966765 - L1PA10 LINE L1 0 6168 5571 1128 83 0 0 chr17 30471715 30471859 -54966621 + L1PA10 LINE L1 5403 5546 -622 369 279 113 6 chr17 30472597 30472760 -54965720 - MIR3 SINE MIR -2 206 25 920 194 55 26 chr17 30472960 30473202 -54965278 + L1MB8 LINE L1 5932 6178 0 1810 193 68 68 chr17 30474186 30474315 -54964165 + MER74B LTR ERVL 56 184 -438 2460 87 0 0 chr17 30474315 30474625 -54963855 - AluSg SINE Alu 0 310 1 1810 193 68 68 chr17 30474625 30475012 -54963468 + MER74B LTR ERVL 183 572 -50 751 276 13 13 chr17 30475308 30475533 -54962947 + MIR SINE MIR 17 241 -21 252 290 129 8 chr17 30475972 30476096 -54962384 + MIR SINE MIR 59 197 -65 376 266 11 0 chr17 30476197 30476291 -54962189 - MIR SINE MIR -165 97 3 25 0 0 0 chr17 30476570 30476595 -54961885 + AT_rich Low_complexity Low_complexity 1 25 0 1838 167 0 3 chr17 30477883 30478171 -54960309 + AluSx SINE Alu 1 287 -25 210 159 48 79 chr17 30479860 30479923 -54958557 + L2 LINE L2 3253 3313 0 324 269 35 14 chr17 30479927 30480072 -54958408 + (TGAA)n Simple_repeat Simple_repeat 3 150 0 266 232 19 142 chr17 30480673 30480828 -54957652 + MIR SINE MIR 61 196 -66 292 71 36 0 chr17 30480968 30481024 -54957456 + (CAAAA)n Simple_repeat Simple_repeat 3 60 0 423 271 88 11 chr17 30481357 30481538 -54956942 - MIR SINE MIR -31 231 37 370 308 8 0 chr17 30482370 30482503 -54955977 + L2 LINE L2 2509 2642 -672 238 300 29 115 chr17 30482634 30482877 -54955603 + L2 LINE L2 2957 3178 -94 452 265 74 0 chr17 30482905 30483067 -54955413 - MER96 DNA MER1_type -1 174 1 385 282 72 39 chr17 30483875 30484056 -54954424 - L3 LINE CR1 -202 1375 1189 480 35 0 0 chr17 30484504 30484562 -54953918 + (TG)n Simple_repeat Simple_repeat 1 58 0 3136 55 5 0 chr17 30484858 30485255 -54953225 - L1P LINE L1 -999 5147 4749 2696 75 3 3 chr17 30485255 30485597 -54952883 + L1PA7 LINE L1 5805 6153 -1 654 315 69 17 chr17 30486050 30486529 -54951951 + L1MC4a LINE L1 5564 6067 -1741 247 393 52 30 chr17 30486660 30486795 -54951685 - L2 LINE L2 -6 3266 3129 538 273 67 0 chr17 30487168 30487318 -54951162 + MER63A DNA MER1_type 48 207 -3 382 247 62 79 chr17 30487816 30487994 -54950486 + MIR3 SINE MIR 34 208 0 184 291 55 129 chr17 30488318 30488738 -54949742 + L2 LINE L2 2804 3192 -80 262 351 0 0 chr17 30489179 30489273 -54949207 + LTR16A LTR ERVL 329 422 -28 586 300 69 6 chr17 30489611 30489771 -54948709 - MER5B DNA MER1_type -8 170 1 337 289 96 36 chr17 30489774 30489940 -54948540 + MIR SINE MIR 15 190 -72 359 259 0 12 chr17 30490398 30490483 -54947997 + MIR3 SINE MIR 79 162 -46 226 214 0 0 chr17 30491168 30491210 -54947270 + CT-rich Low_complexity Low_complexity 1 42 0 477 289 93 25 chr17 30491476 30491680 -54946800 - MIR SINE MIR -11 251 34 415 241 56 0 chr17 30491671 30491779 -54946701 + L2 LINE L2 3199 3312 -1 * 197 83 28 0 chr17 30492607 30492643 -54945837 + (TTG)n Simple_repeat Simple_repeat 3 39 0 749 314 155 15 chr17 30493001 30493545 -54944935 - L2 LINE L2 -3 3310 2698 968 176 16 39 chr17 30494017 30494057 -54944423 - MER5B DNA MER1_type 0 178 139 2007 232 103 12 chr17 30494057 30494553 -54943927 + MLT1F LTR MaLR 1 541 -1 968 176 16 39 chr17 30494553 30494694 -54943786 - MER5B DNA MER1_type -39 139 1 198 393 40 35 chr17 30495527 30495691 -54942789 - L2 LINE L2 -52 3220 3052 2318 60 0 0 chr17 30495691 30496009 -54942471 - AluY SINE Alu 0 318 1 198 393 40 35 chr17 30496009 30496044 -54942436 - L2 LINE L2 -220 3052 3019 590 280 6 17 chr17 30496885 30497060 -54941420 - Charlie8 DNA MER1_type -2138 279 107 1809 117 11 4 chr17 30497645 30497911 -54940569 + AluSx SINE Alu 1 268 -44 2086 138 21 53 chr17 30498397 30498554 -54939926 + Tigger2a DNA MER2_type 1 161 -2547 1503 157 0 46 chr17 30498554 30498835 -54939645 + AluJo SINE Alu 1 268 -44 2086 138 21 53 chr17 30498835 30499055 -54939425 + Tigger2a DNA MER2_type 161 366 -68 3451 108 6 0 chr17 30499055 30499548 -54938932 + L1P4 LINE L1 5324 5819 -344 477 317 0 14 chr17 30499854 30499999 -54938481 - MIR3 SINE MIR -21 187 45 240 212 45 15 chr17 30500078 30500144 -54938336 + MIR3 SINE MIR 87 154 -54 2344 116 140 8 chr17 30500267 30500645 -54937835 + MSTA LTR MaLR 1 428 0 254 303 141 43 chr17 30500723 30500908 -54937572 + L2 LINE L2 2610 2812 -502 347 333 126 67 chr17 30500965 30501322 -54937158 + L2 LINE L2 2895 3272 0 526 295 132 70 chr17 30502188 30502605 -54935875 + L2 LINE L2 2828 3270 -2 21 0 0 0 chr17 30502608 30502629 -54935851 + AT_rich Low_complexity Low_complexity 1 21 0 1450 256 115 56 chr17 30503865 30504434 -54934046 + MLT1G LTR MaLR 3 590 0 372 326 11 43 chr17 30505241 30505425 -54933055 + MIR SINE MIR 54 231 -31 * 683 328 25 4 chr17 30505401 30505636 -54932844 - MIR SINE MIR -11 251 12 3358 141 35 11 chr17 30506672 30507213 -54931267 - MER41C LTR ERV1 0 554 1 183 203 253 38 chr17 30507392 30507471 -54931009 + MIR SINE MIR 53 148 -114 2135 269 33 122 chr17 30509133 30509536 -54928944 + LTR8A LTR ERV1 34 471 -256 1971 127 3 3 chr17 30509536 30509835 -54928645 - AluSx SINE Alu -13 299 1 1450 151 0 8 chr17 30509839 30510107 -54928373 - AluSq SINE Alu 0 314 49 2135 269 33 122 chr17 30510107 30510459 -54928021 + LTR8A LTR ERV1 474 727 0 301 324 29 29 chr17 30510618 30510757 -54927723 - MIR SINE MIR -18 244 106 224 238 95 0 chr17 30510754 30510817 -54927663 - MER5A DNA MER1_type -62 127 59 * 22 0 0 0 chr17 30510862 30510884 -54927596 + AT_rich Low_complexity Low_complexity 1 22 0 2755 242 49 43 chr17 30510892 30512028 -54926452 - L2 LINE L2 -149 3164 2034 664 48 0 0 chr17 30512152 30512236 -54926244 - L1PA5 LINE L1 0 6154 6071 507 335 24 0 chr17 30512293 30512460 -54926020 - MIR SINE MIR -13 249 79 211 149 43 0 chr17 30512574 30512621 -54925859 + (CAT)n Simple_repeat Simple_repeat 3 51 0 500 320 52 21 chr17 30512628 30512822 -54925658 - MIR SINE MIR -15 247 48 1893 138 0 0 chr17 30512862 30513144 -54925336 - AluSx SINE Alu -30 282 1 210 189 0 0 chr17 30513616 30513653 -54924827 + MIR SINE MIR 89 125 -83 340 232 125 54 chr17 30513868 30514036 -54924444 + MIR SINE MIR 24 203 -59 280 149 0 0 chr17 30514707 30514754 -54923726 + MIR SINE MIR 82 128 -134 183 269 30 0 chr17 30514850 30514917 -54923563 + MIR SINE MIR 168 236 -26 565 272 31 31 chr17 30514984 30515175 -54923305 + MIR SINE MIR 47 237 -25 2056 132 0 0 chr17 30515758 30516106 -54922374 + AluSx SINE Alu 2 349 0 183 42 0 0 chr17 30516132 30516156 -54922324 + (ATG)n Simple_repeat Simple_repeat 1 24 0 312 270 161 57 chr17 30516160 30516371 -54922109 - MIR SINE MIR -10 252 20 300 347 146 24 chr17 30517303 30517516 -54920964 + MIR SINE MIR 21 259 -3 307 308 76 41 chr17 30517524 30517696 -54920784 + MIR SINE MIR 10 187 -75 422 302 121 7 chr17 30518379 30518528 -54919952 - MIR SINE MIR -25 237 72 191 374 47 19 chr17 30518522 30518629 -54919851 + L2 LINE L2 3157 3266 -6 * 284 62 0 21 chr17 30518822 30518870 -54919610 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 201 364 10 30 chr17 30518874 30518973 -54919507 + L2 LINE L2 2994 3090 -182 1678 309 136 19 chr17 30519457 30520318 -54918162 + L3 LINE CR1 614 1575 -2 684 324 40 32 chr17 30520733 30520986 -54917494 + MIR SINE MIR 6 260 -2 236 133 0 117 chr17 30521395 30521455 -54917025 - Tigger5 DNA MER2_type -354 1969 1917 225 232 71 0 chr17 30521859 30521915 -54916565 + L2 LINE L2 3186 3245 -27 761 312 135 51 chr17 30521932 30522672 -54915808 + L2 LINE L2 2152 2953 -361 255 31 0 0 chr17 30522738 30522770 -54915710 + (TG)n Simple_repeat Simple_repeat 2 33 0 1300 99 0 0 chr17 30522810 30522982 -54915498 - AluSq SINE Alu -141 172 1 479 244 8 30 chr17 30522983 30523114 -54915366 - MIR SINE MIR -56 206 79 477 176 55 0 chr17 30523404 30523495 -54914985 + MLT1D LTR MaLR 44 139 -366 497 148 0 1 chr17 30523527 30523618 -54914862 + L1MA9 LINE L1 6072 6170 -130 886 246 34 97 chr17 30523627 30523666 -54914814 + MLT1D LTR MaLR 175 215 -288 1470 127 0 9 chr17 30523666 30523940 -54914540 + AluSg/x SINE Alu 73 310 0 886 246 34 97 chr17 30523940 30524168 -54914312 + MLT1D LTR MaLR 215 461 -42 1091 242 5 0 chr17 30524726 30524945 -54913535 + MER58A DNA MER1_type 5 224 0 1748 134 33 11 chr17 30525027 30525339 -54913141 + AluSx SINE Alu 1 318 0 1848 92 4 0 chr17 30525440 30525689 -54912791 + AluSp SINE Alu 53 302 -11 189 300 256 0 chr17 30526544 30526634 -54911846 + L2 LINE L2 3197 3309 -4 431 317 36 5 chr17 30526660 30526847 -54911633 + MIR SINE MIR 16 212 -50 506 170 0 0 chr17 30527659 30527753 -54910727 + L1MA4 LINE L1 6084 6177 -123 348 61 0 0 chr17 30527753 30527802 -54910678 + Alu SINE Alu 250 298 -3 467 225 8 0 chr17 30527802 30527974 -54910506 + L1MA4 LINE L1 6165 6337 0 287 301 115 64 chr17 30528119 30528185 -54910295 + L2 LINE L2 3150 3211 -102 1630 210 94 44 chr17 30528185 30528662 -54909818 + MLT1D LTR MaLR 3 503 -2 287 301 115 64 chr17 30528662 30528751 -54909729 + L2 LINE L2 3211 3313 0 372 267 105 37 chr17 30528782 30528973 -54909507 + MIR SINE MIR 20 223 -39 350 327 106 37 chr17 30529525 30529633 -54908847 + L1ME4a LINE L1 5563 5662 -459 1947 130 23 10 chr17 30529633 30529941 -54908539 - AluSx SINE Alu 0 312 1 350 327 106 37 chr17 30529941 30530154 -54908326 + L1ME4a LINE L1 5662 5909 -212 377 236 28 42 chr17 30530246 30530390 -54908090 + MLT1L LTR MaLR 134 275 -340 677 134 21 49 chr17 30530412 30530554 -54907926 + L1MB3 LINE L1 6042 6179 -4 408 276 35 59 chr17 30530685 30530888 -54907592 + L2 LINE L2 2171 2368 -946 1818 128 24 24 chr17 30530933 30531229 -54907251 - AluSx SINE Alu -16 296 1 230 298 79 40 chr17 30531282 30531610 -54906870 + L2 LINE L2 2337 2751 -563 353 335 60 20 chr17 30531689 30531889 -54906591 + L2 LINE L2 3106 3313 0 386 252 34 17 chr17 30532120 30532239 -54906241 + MIR SINE MIR 75 195 -67 351 0 0 0 chr17 30532612 30532651 -54905829 + (TG)n Simple_repeat Simple_repeat 1 39 0 1341 251 60 28 chr17 30533496 30533963 -54904517 - L1ME1 LINE L1 -5 6161 5680 1638 194 11 55 chr17 30534508 30534890 -54903590 - MLT1A1 LTR MaLR 0 365 1 2585 139 12 5 chr17 30535064 30535481 -54902999 - L1PA16 LINE L1 -6 6160 5741 503 292 17 17 chr17 30535756 30535934 -54902546 - MIR3 SINE MIR -10 198 21 289 314 159 27 chr17 30536633 30536832 -54901648 + MIR SINE MIR 16 229 -33 679 271 49 22 chr17 30536837 30537062 -54901418 + MIR SINE MIR 32 262 0 189 74 0 0 chr17 30537107 30537134 -54901346 + (T)n Simple_repeat Simple_repeat 1 27 0 221 211 105 0 chr17 30537407 30537464 -54901016 - L2 LINE L2 -52 3261 3199 180 0 0 0 chr17 30537500 30537520 -54900960 + (CTG)n Simple_repeat Simple_repeat 1 20 0 714 316 48 16 chr17 30537568 30537818 -54900662 - MIR SINE MIR -2 260 3 740 232 150 24 chr17 30538354 30538561 -54899919 + MIR SINE MIR 26 258 -4 307 263 42 0 chr17 30538575 30538670 -54899810 + MIR3 SINE MIR 92 190 -18 720 214 96 11 chr17 30540532 30540719 -54897761 - MIR SINE MIR -6 256 54 521 272 89 69 chr17 30541798 30542044 -54896436 - L2 LINE L2 -3 3269 3019 654 229 84 34 chr17 30542063 30542242 -54896238 + MLT1J LTR MaLR 1 188 -323 324 313 0 0 chr17 30543737 30543820 -54894660 + L2 LINE L2 3190 3272 0 1169 57 17 11 chr17 30544325 30544501 -54893979 + (TTTC)n Simple_repeat Simple_repeat 2 178 0 249 33 0 0 chr17 30544533 30544563 -54893917 + (TC)n Simple_repeat Simple_repeat 1 30 0 264 59 0 0 chr17 30544563 30544597 -54893883 + (TA)n Simple_repeat Simple_repeat 1 34 0 2269 102 0 3 chr17 30545236 30545549 -54892931 - AluSx SINE Alu 0 312 1 21 0 0 0 chr17 30545959 30545980 -54892500 + AT_rich Low_complexity Low_complexity 1 21 0 7677 61 2 6 chr17 30545980 30546982 -54891498 + L1P LINE L1 4256 5253 -893 875 146 0 0 chr17 30546986 30547116 -54891364 - AluSq/x SINE Alu -183 130 1 22 35 0 0 chr17 30547119 30547148 -54891332 + AT_rich Low_complexity Low_complexity 1 29 0 3039 114 57 64 chr17 30547249 30547827 -54890653 + MER4B LTR ERV1 1 574 -36 268 239 8 214 chr17 30548471 30548709 -54889771 - MIR SINE MIR -51 211 23 226 282 30 144 chr17 30549754 30550059 -54888421 - L2 LINE L2 -22 3250 2981 263 364 20 10 chr17 30550139 30550301 -54888179 + MER5A DNA MER1_type 12 186 -3 771 233 6 6 chr17 30550323 30550482 -54887998 - MER5A DNA MER1_type -14 175 17 182 339 16 16 chr17 30550552 30550614 -54887866 + L3b LINE CR1 1440 1501 -82 767 230 95 25 chr17 30551675 30551875 -54886605 - MIR SINE MIR -2 260 47 2195 115 0 0 chr17 30551891 30552195 -54886285 - AluSq SINE Alu -9 304 1 369 295 150 29 chr17 30552223 30552430 -54886050 - MIR SINE MIR -15 247 16 367 225 162 0 chr17 30552830 30552941 -54885539 + MIR SINE MIR 119 247 -15 199 217 174 76 chr17 30553495 30553587 -54884893 + MIR SINE MIR 92 192 -70 180 426 33 0 chr17 30553794 30553916 -54884564 - L2 LINE L2 -4 3268 3143 315 216 174 79 chr17 30553928 30553961 -54884519 - LTR33 LTR ERVL -4 517 489 1924 122 3 35 chr17 30553961 30554272 -54884208 + AluSx SINE Alu 2 302 -10 315 216 174 79 chr17 30554272 30554428 -54884052 - LTR33 LTR ERVL -32 489 310 615 254 8 0 chr17 30554544 30554674 -54883806 - LTR33 LTR ERVL -372 149 19 248 230 0 58 chr17 30555087 30555174 -54883306 - L1ME4a LINE L1 -74 6047 5966 2018 114 4 0 chr17 30556406 30556711 -54881769 - AluSx SINE Alu 0 306 1 241 325 151 47 chr17 30557186 30557524 -54880956 + L2 LINE L2 176 548 -2766 661 302 140 22 chr17 30557542 30557993 -54880487 - L2 LINE L2 -4 3309 2806 351 318 99 77 chr17 30558171 30559497 -54878983 + L2 LINE L2 743 3307 -6 572 297 10 36 chr17 30559949 30560141 -54878339 - MIR SINE MIR -56 206 20 270 264 35 35 chr17 30560944 30561031 -54877449 + MIR SINE MIR 74 160 -102 2170 193 90 9 chr17 30561179 30561646 -54876834 + MLT1D LTR MaLR 1 505 0 984 193 74 4 chr17 30561816 30562060 -54876420 - Charlie5 DNA MER1_type 0 2624 2364 2390 159 62 19 chr17 30562064 30562530 -54875950 + MER66B LTR ERV1 1 486 0 578 310 12 6 chr17 30563659 30563830 -54874650 - MIR SINE MIR -89 173 2 242 302 0 0 chr17 30563846 30563909 -54874571 + L2 LINE L2 3246 3308 -5 285 316 105 17 chr17 30564744 30564870 -54873610 - MIR SINE MIR -60 148 10 * 627 271 26 0 chr17 30564808 30564963 -54873517 + MIR SINE MIR 17 175 -87 2101 159 48 22 chr17 30564963 30565496 -54872984 + MLT2A2 LTR ERVL 1 554 0 383 134 0 15 chr17 30566001 30566068 -54872412 - L1MB2 LINE L1 -2 6169 6104 266 360 54 42 chr17 30616099 30616504 -54821976 + L2 LINE L2 2566 2975 -339 369 278 74 1 chr17 30616611 30616719 -54821761 + L1MC4 LINE L1 6538 6646 -1139 260 269 15 0 chr17 30617011 30617078 -54821402 + MIR SINE MIR 62 129 -133 504 285 77 27 chr17 30617327 30617499 -54820981 + MLT1J2 LTR MaLR 74 261 -189 974 211 16 0 chr17 30617499 30617684 -54820796 - MER5A DNA MER1_type -1 188 1 504 285 77 27 chr17 30617684 30617732 -54820748 + MLT1J2 LTR MaLR 261 305 -145 207 204 0 37 chr17 30619043 30619097 -54819383 + MIR SINE MIR 20 71 -137 1324 267 58 47 chr17 30619144 30619677 -54818803 + L2 LINE L2 2781 3313 0 188 333 30 0 chr17 30619678 30619744 -54818736 + MIR3 SINE MIR 138 205 -3 424 301 10 78 chr17 30621253 30621363 -54817117 + MIR SINE MIR 48 141 -121 2038 146 3 7 chr17 30621363 30621671 -54816809 - AluSx SINE Alu -5 307 1 424 301 10 78 chr17 30621671 30621753 -54816727 + MIR SINE MIR 141 227 -35 260 356 139 0 chr17 30621881 30622083 -54816397 - L3 LINE CR1 -90 1487 1258 433 272 37 1 chr17 30622415 30622534 -54815946 - MIR SINE MIR -63 145 42 789 199 0 0 chr17 30622854 30622985 -54815495 - FLAM_A SINE Alu -2 131 1 1569 254 54 8 chr17 30623296 30623869 -54814611 + MLT2F LTR ERVL 3 650 -13 325 282 21 70 chr17 30623914 30624056 -54814424 + L2 LINE L2 2993 3127 -145 490 299 60 16 chr17 30625872 30626056 -54812424 + MIR3 SINE MIR 5 196 -12 200 94 31 0 chr17 30626268 30626300 -54812180 + (TG)n Simple_repeat Simple_repeat 1 33 0 553 276 53 18 chr17 30627312 30627482 -54810998 + MER5B DNA MER1_type 1 176 -2 538 194 200 39 chr17 30627503 30627658 -54810822 + MER5A DNA MER1_type 7 186 -3 391 307 47 13 chr17 30627708 30627858 -54810622 + MIR SINE MIR 94 248 -14 300 226 24 12 chr17 30627884 30627968 -54810512 + MIR SINE MIR 178 262 0 223 288 56 69 chr17 30628980 30629140 -54809340 - MIR SINE MIR -5 257 100 47 44 0 0 chr17 30629140 30629208 -54809272 + AT_rich Low_complexity Low_complexity 1 68 0 386 268 79 73 chr17 30630365 30630529 -54807951 - L2 LINE L2 -6 3266 3102 489 190 0 10 chr17 30630965 30631065 -54807415 - MER20 DNA MER1_type 0 219 121 1831 103 4 0 chr17 30631200 30631434 -54807046 + AluSx SINE Alu 1 235 -77 375 60 0 0 chr17 30631439 30631489 -54806991 + (GAAA)n Simple_repeat Simple_repeat 2 51 0 267 327 105 7 chr17 30631779 30631932 -54806548 - MIR3 SINE MIR -6 202 35 264 301 106 24 chr17 30631998 30632121 -54806359 + MIR3 SINE MIR 76 208 0 318 348 50 12 chr17 30632731 30632892 -54805588 - MIR SINE MIR -75 187 21 502 244 67 62 chr17 30633083 30633276 -54805204 - MIR SINE MIR -47 215 22 2262 72 3 16 chr17 30633407 30633711 -54804769 - AluY SINE Alu -11 300 1 618 266 15 54 chr17 30633910 30634113 -54804367 + MLT1J1 LTR MaLR 252 446 0 1509 271 82 51 chr17 30634296 30634463 -54804017 + L2 LINE L2 2358 2518 -795 531 279 34 24 chr17 30634463 30634671 -54803809 - MER63A DNA MER1_type 0 210 1 1509 271 82 51 chr17 30634671 30634860 -54803620 + L2 LINE L2 2518 2700 -613 1687 145 26 43 chr17 30634860 30635164 -54803316 + AluJb SINE Alu 1 299 -13 1509 271 82 51 chr17 30635164 30635724 -54802756 + L2 LINE L2 2700 3312 -1 642 265 58 5 chr17 30636068 30636257 -54802223 + MIR SINE MIR 57 255 -7 329 264 29 79 chr17 30636607 30636747 -54801733 - MIR3 SINE MIR -71 137 5 199 139 28 0 chr17 30637149 30637185 -54801295 - MIR SINE MIR -118 144 108 327 266 176 43 chr17 30637893 30638126 -54800354 - L2 LINE L2 -100 3172 2909 1754 187 83 31 chr17 30638129 30638573 -54799907 - MLT1C LTR MaLR 0 467 1 288 338 45 59 chr17 30638727 30638949 -54799531 + L2 LINE L2 3046 3264 -8 265 343 29 0 chr17 30639576 30639681 -54798799 - MIR3 SINE MIR -10 198 91 501 289 128 5 chr17 30639998 30640202 -54798278 + MIR SINE MIR 4 232 -30 4550 14 1 0 chr17 30640271 30641051 -54797429 - L1PA2 LINE L1 -390 5765 4985 3481 18 0 0 chr17 30641051 30641435 -54797045 + L1PA2 LINE L1 5764 6155 0 648 265 57 38 chr17 30641771 30641982 -54796498 - MIR SINE MIR -15 247 33 2894 208 16 30 chr17 30642008 30642673 -54795807 - L1ME1 LINE L1 -6 6160 5505 998 217 131 38 chr17 30642738 30643111 -54795369 - HsTC2 DNA Tc2 -2 1896 1313 902 226 36 44 chr17 30643133 30643407 -54795073 - HsTC2 DNA Tc2 -1155 743 472 324 279 27 27 chr17 30643388 30643499 -54794981 - HsTC2 DNA Tc2 -1697 201 91 * 268 271 246 8 chr17 30643633 30643751 -54794729 + MIR SINE MIR 5 150 -112 360 263 105 15 chr17 30644169 30644302 -54794178 - L1ME4a LINE L1 -29 6092 5948 209 346 43 37 chr17 30644338 30644526 -54793954 - L2 LINE L2 -575 2739 2551 245 272 298 31 chr17 30645566 30645757 -54792723 + MIR3 SINE MIR 4 246 -16 267 31 0 0 chr17 30646581 30646613 -54791867 + (TTA)n Simple_repeat Simple_repeat 2 33 0 704 154 0 17 chr17 30646615 30646732 -54791748 - FLAM_A SINE Alu -27 115 1 587 240 5 73 chr17 30646747 30646951 -54791529 - MIR SINE MIR 0 262 73 237 159 0 0 chr17 30647455 30647499 -54790981 + (TG)n Simple_repeat Simple_repeat 1 44 0 180 272 99 62 chr17 30647586 30647667 -54790813 - L2 LINE L2 -298 2974 2891 243 312 54 11 chr17 30650299 30650392 -54788088 - MIR SINE MIR -150 112 16 410 382 26 0 chr17 30650448 30650600 -54787880 - L2 LINE L2 0 3272 3117 408 396 4 11 chr17 30650758 30651028 -54787452 + L2 LINE L2 2387 2654 -660 259 226 65 11 chr17 30651102 30651195 -54787285 - L1MEc LINE L1 -5345 1197 1100 266 31 0 0 chr17 30651195 30651227 -54787253 - LTR13 LTR ERVK 0 1007 976 713 242 167 0 chr17 30651388 30651574 -54786906 - MER58A DNA MER1_type -4 220 4 1439 162 147 4 chr17 30651598 30651857 -54786623 - AluSx SINE Alu -5 297 2 437 415 49 14 chr17 30652077 30652422 -54786058 - L1MEc LINE L1 -6000 825 469 206 357 89 9 chr17 30652424 30652536 -54785944 + L2 LINE L2 2638 2758 -556 199 352 9 67 chr17 30652556 30652661 -54785819 + L2 LINE L2 3174 3272 0 522 308 48 31 chr17 30653508 30653735 -54784745 - MIR SINE MIR -6 256 26 311 345 65 93 chr17 30654902 30655180 -54783300 + L2 LINE L2 3002 3271 -1 361 286 158 0 chr17 30656057 30656233 -54782247 - MIR SINE MIR -43 219 18 331 281 54 42 chr17 30656480 30656647 -54781833 - MIR3 SINE MIR -1 207 39 2604 290 28 6 chr17 30657452 30657952 -54780528 + MER9 LTR ERVK 1 511 0 319 265 176 0 chr17 30658132 30658234 -54780246 - MIR SINE MIR -63 145 26 493 201 158 43 chr17 30658447 30658611 -54779869 + MLT1L LTR MaLR 163 345 -270 347 330 77 10 chr17 30659604 30659798 -54778682 + L2 LINE L2 2815 3021 -251 590 297 161 42 chr17 30659902 30660584 -54777896 - L2 LINE L2 -182 3131 2351 186 276 11 58 chr17 30661278 30661365 -54777115 + L2 LINE L2 2945 3027 -245 246 185 0 37 chr17 30661936 30661990 -54776490 - L2 LINE L2 -1 3312 3261 267 214 0 0 chr17 30662403 30662473 -54776007 + (TCCA)n Simple_repeat Simple_repeat 4 73 0 335 113 16 0 chr17 30662519 30662581 -54775899 + (TCCA)n Simple_repeat Simple_repeat 4 66 0 219 217 0 58 chr17 30662758 30662827 -54775653 + CT-rich Low_complexity Low_complexity 1 65 0 851 243 78 67 chr17 30663470 30663841 -54774639 - MLT1H LTR MaLR -104 445 71 491 305 53 21 chr17 30664094 30664281 -54774199 + L2 LINE L2 3120 3312 -1 21 57 0 0 chr17 30666094 30666129 -54772351 + AT_rich Low_complexity Low_complexity 1 35 0 2020 142 0 0 chr17 30666358 30666668 -54771812 - AluSx SINE Alu -2 310 1 453 311 83 16 chr17 30666905 30667217 -54771263 - L1ME LINE L1 -549 5613 5281 977 179 4 92 chr17 30667217 30667457 -54771023 - MER20 DNA MER1_type 0 219 1 322 268 126 24 chr17 30667678 30667805 -54770675 - MIR SINE MIR -93 169 30 * 385 294 129 6 chr17 30667798 30667961 -54770519 + MIR3 SINE MIR 12 194 -14 252 319 175 0 chr17 30667978 30668138 -54770342 + MIR SINE MIR 63 250 -12 258 259 90 15 chr17 30669057 30669161 -54769319 + MIR SINE MIR 14 127 -81 201 216 0 0 chr17 30669197 30669234 -54769246 + L2 LINE L2 3210 3246 -26 408 274 219 18 chr17 30669300 30669464 -54769016 + MIR SINE MIR 2 198 -64 801 241 0 6 chr17 30669639 30669809 -54768671 + MIR SINE MIR 84 252 -10 201 394 21 0 chr17 30670343 30670437 -54768043 + MER5A DNA MER1_type 72 167 -22 300 291 76 0 chr17 30671139 30671218 -54767262 + MIR3 SINE MIR 102 186 -22 2116 113 3 3 chr17 30671807 30672108 -54766372 + AluSq SINE Alu 1 301 -12 3113 132 175 40 chr17 30672299 30672905 -54765575 - LTR12 LTR ERV1 0 688 1 2164 177 115 65 chr17 30673828 30674244 -54764236 + MLT1E2 LTR MaLR 56 507 -119 4016 120 52 2 chr17 30674244 30674853 -54763627 - MER51C LTR ERV1 0 640 1 2164 177 115 65 chr17 30674853 30674977 -54763503 + MLT1E2 LTR MaLR 507 623 -3 240 263 182 0 chr17 30675027 30675126 -54763354 + L2 LINE L2 3156 3272 0 956 264 54 4 chr17 30675242 30675481 -54762999 + MIR SINE MIR 12 262 0 397 305 0 9 chr17 30677191 30677296 -54761184 + MER81 DNA DNA 11 114 0 200 244 98 37 chr17 30678944 30679026 -54759454 + L2 LINE L2 623 709 -2605 486 294 160 17 chr17 30679163 30679394 -54759086 + L2 LINE L2 2606 2869 -445 293 325 201 0 chr17 30679678 30679832 -54758648 - MLT1L LTR MaLR -123 492 308 241 260 0 0 chr17 30679943 30679993 -54758487 - MLT1L LTR MaLR -446 169 120 496 275 62 38 chr17 30680602 30680762 -54757718 + MIR3 SINE MIR 20 183 -25 348 328 128 57 chr17 30680841 30681192 -54757288 - L2 LINE L2 -3 3310 2935 271 315 95 25 chr17 30681422 30681663 -54756817 - L2 LINE L2 0 3272 3015 2838 186 33 16 chr17 30681683 30682263 -54756217 - L1MB4 LINE L1 -2 6178 5589 336 258 0 49 chr17 30682874 30683037 -54755443 + (CCCCAA)n Simple_repeat Simple_repeat 6 160 0 380 327 64 0 chr17 30683690 30683846 -54754634 - MER117 DNA MER1_type -3 194 29 932 280 115 31 chr17 30683854 30684272 -54754208 + LTR16A1 LTR ERVL 1 453 -4 348 287 26 17 chr17 30684398 30684513 -54753967 - L2 LINE L2 -6 3307 3192 241 321 73 37 chr17 30685663 30685772 -54752708 + MIR3 SINE MIR 93 205 -3 513 254 170 36 chr17 30685817 30686041 -54752439 + MIR SINE MIR 8 261 -1 427 266 18 109 chr17 30686810 30686883 -54751597 - MIR SINE MIR -50 212 134 2361 70 0 0 chr17 30686883 30687181 -54751299 + AluY SINE Alu 1 298 -13 427 266 18 109 chr17 30687181 30687275 -54751205 - MIR SINE MIR -128 134 69 1503 191 3 19 chr17 30687275 30687584 -54750896 + AluJo SINE Alu 1 304 -8 427 266 18 109 chr17 30687584 30687644 -54750836 - MIR SINE MIR -193 69 5 468 325 66 6 chr17 30687934 30688100 -54750380 + MIR SINE MIR 22 197 -65 240 273 0 0 chr17 30688375 30688430 -54750050 - L3b LINE CR1 -420 1163 1109 258 253 13 27 chr17 30688992 30689067 -54749413 + CT-rich Low_complexity Low_complexity 1 74 0 334 257 73 37 chr17 30689204 30689313 -54749167 - MIR SINE MIR -117 145 33 342 296 59 13 chr17 30690008 30690160 -54748320 - MIR3 SINE MIR -13 195 37 201 234 21 21 chr17 30690505 30690552 -54747928 - L3 LINE CR1 -959 618 572 194 258 0 76 chr17 30691409 30691475 -54747005 + MIR SINE MIR 126 186 -76 642 272 193 3 chr17 30692202 30692503 -54745977 + L2 LINE L2 2385 2742 -572 347 102 0 0 chr17 30692512 30692561 -54745919 + MSTD LTR MaLR 1 49 -347 * 1114 196 58 22 chr17 30692557 30692782 -54745698 + MSTD LTR MaLR 153 385 -11 6643 211 90 47 chr17 30692791 30692936 -54745544 + MSTD-int LTR MaLR 2 139 -1596 894 63 79 8 chr17 30692936 30693062 -54745418 + MER85 DNA T2_type 1 135 -4 6643 211 90 47 chr17 30693062 30694573 -54743907 + MSTD-int LTR MaLR 139 1730 -5 1992 160 81 6 chr17 30694578 30694935 -54743545 + MSTD LTR MaLR 1 384 -12 297 209 209 81 chr17 30694963 30695111 -54743369 + L2 LINE L2 2797 2963 -351 180 158 0 0 chr17 30695565 30695603 -54742877 + (TGG)n Simple_repeat Simple_repeat 2 39 0 1165 267 89 22 chr17 30696048 30696419 -54742061 - MLT1J1 LTR MaLR -2 444 49 315 324 0 27 chr17 30697207 30697318 -54741162 - MIR SINE MIR -85 123 16 234 0 0 0 chr17 30697352 30697378 -54741102 + (TC)n Simple_repeat Simple_repeat 1 26 0 237 65 0 0 chr17 30699030 30699061 -54739419 + (TGAA)n Simple_repeat Simple_repeat 4 34 0 293 290 115 91 chr17 30700146 30700432 -54738048 + L3 LINE CR1 1084 1376 -201 199 321 77 42 chr17 30700519 30700687 -54737793 - MIR SINE MIR -54 208 35 651 298 135 30 chr17 30701430 30702051 -54736429 + L2 LINE L2 2552 3237 -76 390 256 6 45 chr17 30702095 30702251 -54736229 + GA-rich Low_complexity Low_complexity 4 153 0 333 100 0 0 chr17 30702393 30702443 -54736037 + (CA)n Simple_repeat Simple_repeat 1 50 0 2030 113 3 0 chr17 30702507 30702791 -54735689 - AluSx SINE Alu -23 289 5 1461 173 32 0 chr17 30702940 30703041 -54735439 + AluJo SINE Alu 21 117 -195 329 0 24 0 chr17 30703041 30703082 -54735398 + (TAAA)n Simple_repeat Simple_repeat 3 44 0 1461 173 32 0 chr17 30703082 30703263 -54735217 + AluJo SINE Alu 117 312 0 270 302 143 16 chr17 30703585 30703711 -54734769 + MIR3 SINE MIR 2 143 -65 315 234 50 63 chr17 30703779 30703927 -54734553 - MLT1H LTR MaLR -2 611 431 273 305 95 60 chr17 30703938 30704138 -54734342 - MLT1I LTR MaLR -123 286 80 2145 194 72 23 chr17 30704209 30704642 -54733838 - MLT2B1 LTR ERVL -66 454 1 420 262 97 46 chr17 30704901 30705153 -54733327 + MLT1J1 LTR MaLR 66 325 -84 2125 83 30 10 chr17 30705705 30706005 -54732475 - AluY SINE Alu -5 306 1 759 292 138 48 chr17 30706060 30706497 -54731983 - L1MC4a LINE L1 -223 5898 5425 189 405 0 12 chr17 30706796 30706880 -54731600 + L3 LINE CR1 1431 1513 -64 227 199 199 30 chr17 30706942 30707073 -54731407 - L1ME4a LINE L1 -2 6119 5967 844 272 5 5 chr17 30707135 30707341 -54731139 + MIR SINE MIR 3 208 -54 438 294 140 25 chr17 30707400 30707686 -54730794 - L1ME4a LINE L1 -327 5794 5476 633 90 150 0 chr17 30707937 30708037 -54730443 - L1PA10 LINE L1 -1 6167 6053 445 298 41 0 chr17 30708749 30708870 -54729610 + MIR SINE MIR 4 129 -133 227 239 109 76 chr17 30709038 30709130 -54729350 + LTR33A LTR ERVL 57 151 -372 3577 104 31 2 chr17 30709482 30709999 -54728481 + L1PA15 LINE L1 5624 6155 -10 253 325 167 8 chr17 30710052 30710178 -54728302 + MIR SINE MIR 9 154 -108 779 196 0 0 chr17 30710558 30710691 -54727789 - FLAM_A SINE Alu 0 133 1 320 297 22 114 chr17 30711017 30711337 -54727143 + L2 LINE L2 2769 3058 -214 532 202 0 75 chr17 30711375 30711563 -54726917 + Charlie7 DNA MER1_type 991 1164 -1448 3299 212 43 17 chr17 30711645 30712518 -54725962 + Charlie7 DNA MER1_type 1156 2051 -561 189 0 0 0 chr17 30712577 30712598 -54725882 + (A)n Simple_repeat Simple_repeat 1 21 0 777 310 86 48 chr17 30713218 30713695 -54724785 + L2 LINE L2 2818 3312 -1 522 222 32 8 chr17 30714226 30714352 -54724128 + MIR SINE MIR 131 259 -3 251 319 0 0 chr17 30714413 30714482 -54723998 - L2 LINE L2 -1 3312 3244 232 291 12 35 chr17 30714554 30714640 -54723840 - L2 LINE L2 -223 3049 2966 354 325 53 48 chr17 30714864 30715092 -54723388 + MIR SINE MIR 20 248 -14 394 270 101 42 chr17 30715328 30715553 -54722927 - MIR SINE MIR -11 251 10 1917 111 3 31 chr17 30715575 30715903 -54722577 - AluSc SINE Alu 0 320 1 328 330 98 17 chr17 30716927 30717100 -54721380 + MIR3 SINE MIR 19 205 -3 1508 244 77 35 chr17 30717301 30717462 -54721018 + MLT1F LTR MaLR 4 157 -385 803 26 35 0 chr17 30717462 30717576 -54720904 + (TCTA)n Simple_repeat Simple_repeat 3 120 0 1508 244 77 35 chr17 30717576 30717931 -54720549 + MLT1F LTR MaLR 157 542 0 382 319 30 7 chr17 30718347 30718482 -54719998 + MIR3 SINE MIR 30 167 -41 246 181 83 42 chr17 30718853 30718925 -54719555 + MER113 DNA MER1_type? 445 519 -2 348 324 126 32 chr17 30718986 30719390 -54719090 + L2 LINE L2 2451 2892 -422 305 339 146 37 chr17 30719465 30719760 -54718720 + L2 LINE L2 2942 3268 -4 1190 67 0 0 chr17 30720234 30720384 -54718096 + AluY SINE Alu 150 299 -12 1652 179 3 17 chr17 30720630 30720927 -54717553 - AluJo SINE Alu -14 298 6 536 244 53 84 chr17 30720991 30721253 -54717227 - MIR SINE MIR 0 262 9 180 382 24 0 chr17 30722383 30722506 -54715974 + L2 LINE L2 2634 2759 -555 782 255 34 10 chr17 30722937 30723145 -54715335 + MIR SINE MIR 50 262 0 529 301 0 0 chr17 30723829 30723962 -54714518 + MIR SINE MIR 99 231 -31 303 253 90 84 chr17 30724110 30724276 -54714204 + L3 LINE CR1 1407 1573 -4 814 250 83 0 chr17 30724356 30724572 -54713908 + MIR SINE MIR 2 235 -27 623 213 21 21 chr17 30724926 30725067 -54713413 - FLAM_C SINE Alu -1 142 2 1470 60 0 0 chr17 30726842 30727025 -54711455 - AluY SINE Alu -2 309 127 246 62 0 0 chr17 30727025 30727057 -54711423 + (TTTC)n Simple_repeat Simple_repeat 3 34 0 999 85 0 0 chr17 30727057 30727187 -54711293 - AluYb8 SINE Alu -186 132 3 252 198 10 125 chr17 30727205 30727301 -54711179 - L2 LINE L2 -94 3219 3135 381 305 153 16 chr17 30727578 30727768 -54710712 - MIR SINE MIR 0 262 47 376 276 119 46 chr17 30728206 30728467 -54710013 + L1MC4a LINE L1 5685 5964 -157 245 151 19 0 chr17 30729187 30729240 -54709240 + (CA)n Simple_repeat Simple_repeat 2 55 0 198 270 0 0 chr17 30729337 30729400 -54709080 + CT-rich Low_complexity Low_complexity 1 63 0 256 203 14 0 chr17 30729933 30730002 -54708478 + L1MA8 LINE L1 6221 6290 -1 2674 176 67 75 chr17 30730061 30730792 -54707688 - LTR8A LTR ERV1 -2 725 1 805 316 64 18 chr17 30731076 30731358 -54707122 + LTR16C LTR ERVL 98 392 -99 306 241 138 17 chr17 30733801 30733917 -54704563 - MIR3 SINE MIR -66 142 13 279 279 0 0 chr17 30734184 30734263 -54704217 + MIR SINE MIR 117 195 -67 226 164 36 18 chr17 30734815 30734870 -54703610 + L2 LINE L2 3258 3313 0 532 238 57 66 chr17 30735379 30735456 -54703024 + MER112 DNA MER1_type 5 81 -179 593 189 44 56 chr17 30735456 30735636 -54702844 + MER104 DNA MER2_type 3 180 0 532 238 57 66 chr17 30735636 30735785 -54702695 + MER112 DNA MER1_type 81 229 -31 338 359 51 5 chr17 30735984 30736179 -54702301 + MIR SINE MIR 58 261 -1 266 291 0 0 chr17 30737225 30737304 -54701176 + (TAGG)n Simple_repeat Simple_repeat 4 82 0 195 214 0 0 chr17 30737461 30737503 -54700977 - MIR SINE MIR -114 148 107 475 336 56 22 chr17 30738183 30738415 -54700065 - MIR SINE MIR -17 245 6 251 371 48 6 chr17 30739494 30739661 -54698819 + MIR SINE MIR 89 262 0 200 356 0 0 chr17 30739941 30740014 -54698466 + (TG)n Simple_repeat Simple_repeat 2 74 0 201 368 13 0 chr17 30740651 30740727 -54697753 + L2 LINE L2 2544 2620 -694 311 290 21 0 chr17 30740734 30740827 -54697653 + L2 LINE L2 3219 3313 0 5805 198 45 13 chr17 30741203 30743421 -54695059 + L1MD1 LINE L1 3938 6242 0 180 0 0 0 chr17 30743465 30743485 -54694995 + (CA)n Simple_repeat Simple_repeat 2 21 0 622 201 41 96 chr17 30743496 30743715 -54694765 + L1MD3 LINE L1 7789 7995 0 788 297 55 0 chr17 30744706 30744942 -54693538 - MIR SINE MIR 0 262 14 300 287 68 17 chr17 30745257 30745431 -54693049 + MIR SINE MIR 10 190 -67 235 297 94 14 chr17 30745578 30745716 -54692764 + L2 LINE L2 3006 3154 -159 265 325 60 0 chr17 30746210 30746327 -54692153 - MIR SINE MIR -30 232 109 251 279 116 23 chr17 30746387 30746516 -54691964 + MIR SINE MIR 101 241 -21 762 174 7 7 chr17 30747188 30747326 -54691154 + FLAM_C SINE Alu 6 143 0 189 312 123 14 chr17 30747511 30747649 -54690831 + MIR SINE MIR 89 241 -21 200 111 28 0 chr17 30748592 30748628 -54689852 + GA-rich Low_complexity Low_complexity 2 38 0 230 294 184 15 chr17 30748902 30749038 -54689442 + L2 LINE L2 2926 3084 -188 198 0 0 0 chr17 30750094 30750116 -54688364 + (A)n Simple_repeat Simple_repeat 1 22 0 1411 185 85 48 chr17 30750796 30751051 -54687429 - MLT1A1 LTR MaLR 0 365 92 1968 138 3 26 chr17 30751051 30751356 -54687124 + AluSx SINE Alu 1 298 -14 1411 185 85 48 chr17 30751356 30751452 -54687028 - MLT1A1 LTR MaLR -273 92 1 3524 121 27 109 chr17 30751635 30751925 -54686555 - Tigger3(Golem) DNA MER2_type 0 3029 2717 2326 60 0 7 chr17 30751925 30752209 -54686271 + AluY SINE Alu 1 282 -29 3524 121 27 109 chr17 30752209 30752267 -54686213 - Tigger3(Golem) DNA MER2_type -312 2717 2656 715 205 87 0 chr17 30752267 30752428 -54686052 + FAM SINE Alu 1 175 0 3524 121 27 109 chr17 30752428 30752831 -54685649 - Tigger3(Golem) DNA MER2_type -373 2656 2339 1915 159 74 0 chr17 30752836 30753162 -54685318 - Tigger3(Golem) DNA MER2_type -2679 350 1 210 310 0 0 chr17 30753826 30753884 -54684596 + MIR SINE MIR 78 135 -73 431 322 20 14 chr17 30754397 30754543 -54683937 - MIR SINE MIR -50 212 66 378 257 44 0 chr17 30754545 30754658 -54683822 + MIR SINE MIR 119 236 -26 2204 115 0 7 chr17 30754668 30755013 -54683467 + AluSx SINE Alu 1 312 0 309 151 0 0 chr17 30755046 30755099 -54683381 + CT-rich Low_complexity Low_complexity 2 54 0 473 304 36 6 chr17 30755445 30755613 -54682867 - MIR SINE MIR -70 192 20 235 358 63 31 chr17 30756414 30756668 -54681812 + L2 LINE L2 2831 3092 -180 1302 261 41 22 chr17 30756788 30757202 -54681278 + Charlie7 DNA MER1_type 35 456 -2156 237 345 149 6 chr17 30757503 30757671 -54680809 - MIR SINE MIR -56 206 15 535 242 34 20 chr17 30758952 30759101 -54679379 - MIR SINE MIR -2 260 110 196 121 0 0 chr17 30759403 30759436 -54679044 - L2 LINE L2 -10 3303 3271 2296 153 52 28 chr17 30759933 30760097 -54678383 + Tigger2a DNA MER2_type 1 160 -2548 2776 132 14 5 chr17 30760097 30760521 -54677959 - MSTA LTR MaLR 0 428 1 2296 153 52 28 chr17 30760521 30760780 -54677700 + Tigger2a DNA MER2_type 160 434 0 325 336 29 0 chr17 30761198 30761335 -54677145 + L1MC/D LINE L1 5585 5725 -2083 23 0 0 0 chr17 30762016 30762039 -54676441 + AT_rich Low_complexity Low_complexity 1 23 0 572 272 112 16 chr17 30762106 30762429 -54676051 - HAL1 LINE L1 -111 2396 2043 287 361 58 23 chr17 30762873 30763178 -54675302 - L2 LINE L2 -220 3052 2740 201 309 62 25 chr17 30763346 30763427 -54675053 - MIR3 SINE MIR -1 207 124 256 263 25 12 chr17 30763447 30763527 -54674953 + L1M LINE L1 5321 5401 -2407 248 232 15 0 chr17 30764267 30764341 -54674139 + L1 LINE L1 4769 4843 -1303 1777 185 25 35 chr17 30764550 30764950 -54673530 + MER7C DNA MER2_type 1 396 -206 1340 150 0 0 chr17 30765397 30765597 -54672883 + MER7C DNA MER2_type 400 599 -13 207 204 0 0 chr17 30765619 30765668 -54672812 + (CA)n Simple_repeat Simple_repeat 2 50 0 499 267 66 27 chr17 30765855 30766113 -54672367 + L1MC/D LINE L1 5261 5528 -2280 2105 71 41 34 chr17 30767204 30767498 -54670982 - AluY SINE Alu -15 296 1 3185 172 190 81 chr17 30767755 30768674 -54669806 + LTR28 LTR ERV1 1 1020 0 1229 167 122 45 chr17 30768918 30769205 -54669275 - MLT1A1 LTR MaLR -54 311 3 311 288 91 15 chr17 30769491 30769623 -54668857 + MIR SINE MIR 104 245 -17 198 91 0 0 chr17 30769629 30769662 -54668818 + (TTG)n Simple_repeat Simple_repeat 1 33 0 255 286 48 12 chr17 30770439 30770523 -54667957 - MIR SINE MIR -127 135 49 951 67 0 0 chr17 30770895 30771014 -54667466 + AluY SINE Alu 180 298 -13 2419 157 36 19 chr17 30771302 30771717 -54666763 + MSTC LTR MaLR 1 422 -6 2192 87 35 0 chr17 30771788 30771954 -54666526 - AluY SINE Alu -14 297 115 233 29 0 29 chr17 30771954 30771989 -54666491 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2192 87 35 0 chr17 30771989 30772109 -54666371 - AluY SINE Alu -196 115 1 910 250 151 19 chr17 30772273 30772585 -54665895 - MLT1I LTR MaLR 0 409 57 383 325 17 0 chr17 30772835 30772952 -54665528 - L2 LINE L2 -1 3271 3153 339 271 107 8 chr17 30772998 30773120 -54665360 + MIR3 SINE MIR 3 136 -72 484 257 53 5 chr17 30775265 30775452 -54663028 - Zaphod DNA AcHobo 0 4031 3836 198 191 0 0 chr17 30775474 30775516 -54662964 + (TA)n Simple_repeat Simple_repeat 2 43 0 280 305 0 15 chr17 30775534 30775665 -54662815 + (TA)n Simple_repeat Simple_repeat 2 130 0 1579 179 23 29 chr17 30775683 30776032 -54662448 - Zaphod DNA AcHobo -180 3851 3505 779 170 23 2 chr17 30776032 30776176 -54662304 - MSTC LTR MaLR 0 428 213 3297 220 118 47 chr17 30776176 30777186 -54661294 - MSTC-int LTR MaLR -646 1089 6 1213 208 0 0 chr17 30777204 30777411 -54661069 - MSTC LTR MaLR -1 427 221 208 200 0 0 chr17 30777788 30777828 -54660652 + MIR SINE MIR 223 262 0 322 192 313 0 chr17 30779327 30779426 -54659054 + MIR SINE MIR 116 245 -17 785 275 198 22 chr17 30779974 30780389 -54658091 - L2 LINE L2 0 3313 2826 1959 151 0 16 chr17 30780463 30780803 -54657677 - AluJb SINE Alu 0 312 2 3759 116 61 5 chr17 30781226 30781796 -54656684 + LTR43 LTR ERV1 1 602 0 280 287 120 42 chr17 30781803 30781970 -54656510 + MIR3 SINE MIR 15 194 -14 1973 214 46 30 chr17 30782502 30782998 -54655482 + MLT1D LTR MaLR 1 504 -1 237 215 83 107 chr17 30783004 30783125 -54655355 - HAL1 LINE L1 -55 2452 2335 206 244 0 0 chr17 30783210 30783251 -54655229 + (CATATA)n Simple_repeat Simple_repeat 3 43 0 287 83 0 21 chr17 30783341 30783389 -54655091 + (TA)n Simple_repeat Simple_repeat 1 47 0 1509 181 11 14 chr17 30783389 30783676 -54654804 - AluJb SINE Alu -26 286 1 3062 277 133 48 chr17 30783698 30785665 -54652815 - HAL1 LINE L1 -365 2142 9 823 200 45 55 chr17 30786410 30786610 -54651870 + MLT1D LTR MaLR 1 198 -307 740 210 93 19 chr17 30786584 30786798 -54651682 + MLT1A1 LTR MaLR 136 365 0 * 181 200 0 29 chr17 30787031 30787066 -54651414 - L3 LINE CR1 -112 1465 1432 374 341 24 78 chr17 30787433 30787729 -54650751 - L2 LINE L2 0 3272 2993 250 301 94 28 chr17 30787785 30787943 -54650537 - MIR3 SINE MIR -8 200 35 804 189 0 24 chr17 30788091 30788260 -54650220 - FRAM SINE Alu -4 172 8 1864 147 177 11 chr17 30788657 30789024 -54649456 - MSTA LTR MaLR 0 428 1 300 303 10 40 chr17 30789374 30789473 -54649007 + L1MC4a LINE L1 5983 6078 -1730 383 186 0 47 chr17 30789496 30789582 -54648898 + MER20 DNA MER1_type 57 138 -81 695 141 8 16 chr17 30789598 30789719 -54648761 + AluJb SINE Alu 5 124 -188 614 340 53 5 chr17 30791763 30791972 -54646508 - MIR SINE MIR -17 245 27 958 147 35 56 chr17 30794965 30795162 -54643318 + MLT1C LTR MaLR 1 193 -274 1469 158 0 24 chr17 30795175 30795428 -54643052 + AluJo SINE Alu 52 298 -14 910 188 0 0 chr17 30795432 30795592 -54642888 + AluJb SINE Alu 138 297 -15 1753 94 4 0 chr17 30795601 30795836 -54642644 + AluY SINE Alu 1 236 -75 782 209 34 28 chr17 30795836 30796013 -54642467 + MLT1C LTR MaLR 290 467 0 2298 72 0 20 chr17 30796602 30796906 -54641574 + AluY SINE Alu 1 298 -13 182 295 16 0 chr17 30796967 30797028 -54641452 - MIR3 SINE MIR -41 167 106 319 233 101 78 chr17 30797035 30797164 -54641316 - L2 LINE L2 -14 3299 3168 251 152 0 22 chr17 30797434 30797480 -54641000 - MLT1L LTR MaLR -363 252 208 1139 162 35 5 chr17 30797516 30797714 -54640766 + MER20 DNA MER1_type 16 219 0 291 317 97 14 chr17 30797715 30797860 -54640620 - MLT1L LTR MaLR -417 198 42 590 185 140 13 chr17 30798008 30798165 -54640315 - MER69 DNA AcHobo 0 2526 2350 212 274 0 48 chr17 30798968 30799030 -54639450 + MIR SINE MIR 118 176 -86 696 301 42 36 chr17 30799104 30799521 -54638959 + L2 LINE L2 2852 3269 -3 465 225 0 0 chr17 30799985 30800074 -54638406 + MIR SINE MIR 61 149 -59 351 0 0 0 chr17 30800492 30800531 -54637949 + (TG)n Simple_repeat Simple_repeat 1 39 0 4125 130 15 21 chr17 30800656 30801319 -54637161 - Tigger1 DNA MER2_type -355 2063 1405 * 6641 179 41 25 chr17 30801305 30801532 -54636948 - Tigger1 DNA MER2_type -1228 1190 968 1483 180 169 21 chr17 30801532 30801905 -54636575 - MSTA LTR MaLR 0 428 1 6641 179 41 25 chr17 30801905 30802840 -54635640 - Tigger1 DNA MER2_type -1450 968 9 1883 129 7 0 chr17 30802846 30803125 -54635355 + AluJb SINE Alu 4 284 -28 22 35 0 0 chr17 30803125 30803154 -54635326 + AT_rich Low_complexity Low_complexity 1 29 0 395 203 32 98 chr17 30803544 30803667 -54634813 - MIR SINE MIR 0 262 148 337 283 19 36 chr17 30803760 30803917 -54634563 - MIR3 SINE MIR -63 145 1 466 300 69 6 chr17 30804045 30804205 -54634275 + MIR SINE MIR 72 241 -21 2119 98 0 3 chr17 30804522 30804817 -54633663 + AluSc SINE Alu 1 294 -15 210 389 8 24 chr17 30804818 30804944 -54633536 + MER5A DNA MER1_type 65 188 -1 277 256 94 34 chr17 30805058 30805175 -54633305 - L3 LINE CR1 -3 1574 1451 * 454 236 47 0 chr17 30805165 30805271 -54633209 + MIR3 SINE MIR 91 201 -7 350 393 7 0 chr17 30805718 30805863 -54632617 - MIR SINE MIR -25 237 92 205 267 0 0 chr17 30807421 30807466 -54631014 + (TG)n Simple_repeat Simple_repeat 2 46 0 213 121 0 0 chr17 30809316 30809349 -54629131 + (TCTG)n Simple_repeat Simple_repeat 2 34 0 337 253 35 0 chr17 30809983 30810070 -54628410 - MIR SINE MIR -19 243 154 1519 197 59 51 chr17 30810087 30810462 -54628018 + MLT1D LTR MaLR 1 378 -127 249 33 0 0 chr17 30810499 30810529 -54627951 + (A)n Simple_repeat Simple_repeat 1 30 0 632 224 0 7 chr17 30811025 30811168 -54627312 + MLT1D LTR MaLR 364 505 0 254 356 0 5 chr17 30811184 30811277 -54627203 - MIR SINE MIR -116 92 2 202 182 0 0 chr17 30811470 30811503 -54626977 + polypyrimidine Low_complexity Low_complexity 1 33 0 1116 117 21 16 chr17 30811765 30811953 -54626527 + MER53 DNA DNA 1 189 0 216 264 165 58 chr17 30812551 30812672 -54625808 - L2 LINE L2 -2 3311 3178 1469 227 85 56 chr17 30812914 30813145 -54625335 - MLT1F LTR MaLR -2 540 317 2791 3 0 0 chr17 30813145 30813453 -54625027 - AluYa5 SINE Alu -3 308 1 1469 227 85 56 chr17 30813453 30813737 -54624743 - MLT1F LTR MaLR -225 317 10 1547 197 61 83 chr17 30813738 30814210 -54624270 - MLT1C LTR MaLR 0 467 6 679 262 42 23 chr17 30814765 30815072 -54623408 + L1ME3 LINE L1 5650 5956 -206 1061 140 0 29 chr17 30815319 30815490 -54622990 - FRAM SINE Alu 0 166 1 1490 213 3 14 chr17 30815494 30815810 -54622670 - AluJo SINE Alu 0 313 1 569 317 90 50 chr17 30816417 30816916 -54621564 + L2 LINE L2 2377 2895 -419 233 250 19 0 chr17 30817084 30817136 -54621344 + L2 LINE L2 3006 3058 -255 193 308 243 9 chr17 30817327 30817434 -54621046 + L2 LINE L2 3136 3267 -5 345 274 59 39 chr17 30818254 30818407 -54620073 + MIR SINE MIR 107 262 0 1146 164 35 21 chr17 30818536 30818809 -54619671 + MER2 DNA MER2_type 1 315 -30 269 313 30 10 chr17 30819922 30820021 -54618459 - MER91B DNA MER1_type 0 190 90 412 252 84 8 chr17 30820039 30820158 -54618322 - MER91B DNA MER1_type -61 129 2 1207 213 21 21 chr17 30820398 30820685 -54617795 - AluJo SINE Alu -22 290 4 275 302 0 0 chr17 30821416 30821479 -54617001 + MIR SINE MIR 84 146 -62 225 169 0 0 chr17 30821743 30821802 -54616678 + (TTCA)n Simple_repeat Simple_repeat 3 61 0 692 245 25 92 chr17 30821853 30822135 -54616345 + MLT1I LTR MaLR 93 355 -54 364 153 17 0 chr17 30822133 30822192 -54616288 - AluSp SINE Alu -106 197 138 * 819 311 42 0 chr17 30822192 30822433 -54616047 - L2 LINE L2 -230 3083 2833 1429 245 56 80 chr17 30822435 30822553 -54615927 + L1ME3 LINE L1 5173 5292 -870 2538 103 19 8 chr17 30822553 30822913 -54615567 + THE1B LTR MaLR 1 364 0 1429 245 56 80 chr17 30822913 30822991 -54615489 + L1ME3 LINE L1 5292 5370 -792 1353 178 39 45 chr17 30822991 30823300 -54615180 + AluJo SINE Alu 1 307 -5 1429 245 56 80 chr17 30823300 30823844 -54614636 + L1ME3 LINE L1 5370 5901 -261 1767 164 0 0 chr17 30823844 30824137 -54614343 - AluSx SINE Alu -19 293 1 1429 245 56 80 chr17 30824137 30824392 -54614088 + L1ME3 LINE L1 5901 6161 -1 739 293 115 42 chr17 30824432 30824463 -54614017 - L2 LINE L2 -499 2815 2788 2412 115 28 33 chr17 30824463 30824827 -54613653 + THE1B LTR MaLR 1 362 -2 739 293 115 42 chr17 30824827 30825300 -54613180 - L2 LINE L2 -526 2788 2274 258 81 0 0 chr17 30825338 30825375 -54613105 + (CA)n Simple_repeat Simple_repeat 2 38 0 200 317 49 40 chr17 30825944 30826072 -54612408 + MIR SINE MIR 26 142 -66 323 285 91 42 chr17 30826640 30826907 -54611573 + MLT1F1 LTR MaLR 201 517 -50 192 324 28 14 chr17 30827666 30827737 -54610743 - MIR3 SINE MIR -48 160 89 2234 148 89 8 chr17 30827927 30828320 -54610160 + MSTA LTR MaLR 1 425 -3 2397 165 24 21 chr17 30829506 30829931 -54608549 - MSTB LTR MaLR 0 426 1 661 303 41 5 chr17 30830030 30830225 -54608255 + MIR SINE MIR 25 226 -36 209 346 13 0 chr17 30830268 30830346 -54608134 - MIR SINE MIR -108 154 76 24 0 0 0 chr17 30830476 30830500 -54607980 + AT_rich Low_complexity Low_complexity 1 24 0 180 179 0 0 chr17 30831528 30831567 -54606913 + (TGAA)n Simple_repeat Simple_repeat 2 40 0 763 284 28 0 chr17 30832510 30832728 -54605752 + L1MC/D LINE L1 5574 5797 -2011 2061 125 0 4 chr17 30832832 30833113 -54605367 - AluSq SINE Alu -33 280 1 27 49 0 0 chr17 30833256 30833297 -54605183 + AT_rich Low_complexity Low_complexity 1 41 0 495 243 28 0 chr17 30833541 30833648 -54604832 - MER81 DNA DNA -3 111 2 206 267 186 0 chr17 30833765 30833851 -54604629 + MIR SINE MIR 63 164 -98 720 302 200 8 chr17 30833874 30834364 -54604116 + L2 LINE L2 975 1558 -1756 1688 179 47 47 chr17 30834733 30835114 -54603366 + MLT1B LTR MaLR 10 390 0 626 328 139 17 chr17 30835114 30835516 -54602964 + L2 LINE L2 2863 3313 0 226 318 210 9 chr17 30835805 30836038 -54602442 - L3 LINE CR1 -23 1554 1275 213 121 0 0 chr17 30836104 30836137 -54602343 + (TGAA)n Simple_repeat Simple_repeat 4 36 0 186 156 0 0 chr17 30836284 30836316 -54602164 + L2 LINE L2 3282 3313 0 455 270 24 41 chr17 30837072 30837098 -54601382 - L1MA2 LINE L1 -302 5819 5794 370 237 11 0 chr17 30837098 30837191 -54601289 - L1MA10 LINE L1 -1 6333 6240 455 270 24 41 chr17 30837191 30837432 -54601048 - L1MA2 LINE L1 -327 5794 5589 372 281 48 14 chr17 30837728 30837874 -54600606 + MIR SINE MIR 100 250 -12 200 233 17 0 chr17 30838122 30838182 -54600298 + (TAAA)n Simple_repeat Simple_repeat 1 61 0 228 362 184 7 chr17 30838355 30838496 -54599984 - L3 LINE CR1 -37 1540 1375 694 246 58 8 chr17 30838637 30838877 -54599603 + LTR16C LTR ERVL 223 474 -17 293 275 37 22 chr17 30839490 30839595 -54598885 + MIR SINE MIR 5 111 -106 920 107 0 37 chr17 30839971 30840158 -54598322 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 296 96 39 0 chr17 30840159 30840211 -54598269 + GA-rich Low_complexity Low_complexity 3 56 0 2520 113 16 11 chr17 30840591 30840964 -54597516 - THE1C LTR MaLR 0 375 1 1618 185 47 22 chr17 30843447 30843766 -54594714 + L1M4b LINE L1 2 328 -6531 1405 204 50 62 chr17 30843770 30844191 -54594289 + MLT2C2 LTR ERVL 1 416 -48 4208 212 160 12 chr17 30844191 30845426 -54593054 + L1M4b LINE L1 430 1834 -5021 432 231 9 46 chr17 30845429 30845537 -54592943 + L1M4b LINE L1 156 259 -6600 337 197 0 56 chr17 30845537 30845608 -54592872 - MLT2D LTR ERVL -119 295 229 323 253 46 0 chr17 30845589 30845676 -54592804 - MLT2D LTR ERVL -118 296 206 * 1732 249 28 34 chr17 30845677 30846412 -54592068 + L1M4b LINE L1 1859 2723 -4415 233 281 98 0 chr17 30846596 30846678 -54591802 + L1MC4 LINE L1 6614 6703 -1339 228 227 0 82 chr17 30846687 30846797 -54591683 + L1MC4 LINE L1 6603 6703 -1339 360 189 0 0 chr17 30846802 30846876 -54591604 + (TA)n Simple_repeat Simple_repeat 1 74 0 1577 238 88 8 chr17 30846888 30847368 -54591112 + L1M4b LINE L1 3264 3781 -3176 1976 150 10 0 chr17 30847566 30847866 -54590614 - AluJb SINE Alu -9 303 1 205 272 37 56 chr17 30848012 30848137 -54590343 - MIR SINE MIR -87 121 35 465 317 47 29 chr17 30848326 30848496 -54589984 - MIR SINE MIR -65 143 6 228 226 87 70 chr17 30850548 30850663 -54587817 + MIR SINE MIR 36 152 -56 182 297 110 22 chr17 30851783 30851874 -54586606 - MIR3 SINE MIR -28 180 82 219 88 0 0 chr17 30852277 30852311 -54586169 + (TGGGGG)n Simple_repeat Simple_repeat 2 35 0 182 279 105 12 chr17 30852396 30852482 -54585998 - L2 LINE L2 -56 3216 3123 27 29 0 0 chr17 30852553 30852587 -54585893 + AT_rich Low_complexity Low_complexity 1 34 0 4022 147 7 98 chr17 30852751 30853704 -54584776 + L1MC2 LINE L1 5189 6044 -300 1250 67 0 0 chr17 30853805 30853955 -54584525 + AluY SINE Alu 157 306 -5 1588 236 63 16 chr17 30853971 30854399 -54584081 + MLT1D LTR MaLR 58 505 0 1020 222 20 20 chr17 30855776 30856024 -54582456 - MLT1D LTR MaLR 0 505 258 550 159 0 23 chr17 30856317 30856405 -54582075 + AluS SINE Alu 6 91 -222 1600 248 72 39 chr17 30856604 30857143 -54581337 + Zaphod DNA AcHobo 38 558 -3473 198 103 0 0 chr17 30857143 30857172 -54581308 + (TG)n Simple_repeat Simple_repeat 2 30 0 1600 248 72 39 chr17 30857172 30857442 -54581038 + Zaphod DNA AcHobo 558 3509 -522 499 104 0 0 chr17 30857442 30857509 -54580971 + MSTC LTR MaLR 1 67 -361 362 258 80 54 chr17 30857668 30857873 -54580607 + MIR SINE MIR 40 250 -12 1924 134 0 42 chr17 30858533 30858839 -54579641 - AluJo SINE Alu -14 298 6 340 322 4 61 chr17 30858850 30859034 -54579446 - MIR SINE MIR -62 146 13 751 217 7 0 chr17 30859151 30859303 -54579177 + MER117 DNA MER1_type 1 153 -44 545 258 55 82 chr17 30859344 30859673 -54578807 - MLT1J LTR MaLR -191 320 1 349 310 99 0 chr17 30860064 30860206 -54578274 - MIR3 SINE MIR -20 188 33 193 191 21 32 chr17 30860460 30860554 -54577926 + (TG)n Simple_repeat Simple_repeat 1 93 0 2204 132 0 0 chr17 30860727 30861030 -54577450 + AluSx SINE Alu 1 303 -9 1756 178 53 12 chr17 30861034 30861371 -54577109 + MLT1A1 LTR MaLR 10 360 -5 367 93 0 0 chr17 30861379 30861433 -54577047 - MER53 DNA DNA -1 188 135 23 0 0 0 chr17 30861727 30861750 -54576730 + AT_rich Low_complexity Low_complexity 1 23 0 314 265 0 0 chr17 30863383 30863451 -54575029 + MARNA DNA Mariner 317 384 -202 246 307 50 36 chr17 30863527 30863667 -54574813 + MIR SINE MIR 56 197 -65 279 221 12 70 chr17 30863855 30863941 -54574539 + L2 LINE L2 3187 3267 -5 691 285 39 43 chr17 30864623 30864844 -54573636 - MIR SINE MIR -6 256 35 2130 135 0 0 chr17 30864844 30865147 -54573333 - AluSx SINE Alu -9 303 1 691 285 39 43 chr17 30865147 30865181 -54573299 - MIR SINE MIR -227 35 2 382 306 0 9 chr17 30865726 30865834 -54572646 + MIR SINE MIR 46 152 -110 391 307 71 13 chr17 30866692 30866917 -54571563 + L2 LINE L2 2456 2693 -621 1192 246 45 5 chr17 30866920 30867298 -54571182 - L1M4 LINE L1 -872 5274 4882 1659 163 18 7 chr17 30867325 30867602 -54570878 + AluJb SINE Alu 1 280 -32 630 283 111 7 chr17 30867632 30868125 -54570355 + L2 LINE L2 2702 3244 -69 * 797 261 17 13 chr17 30868123 30868353 -54570127 + MIR SINE MIR 14 244 -18 250 246 184 18 chr17 30868631 30868745 -54569735 + MIR3 SINE MIR 48 180 -28 278 286 112 18 chr17 30868995 30869177 -54569303 + MIR SINE MIR 36 232 -30 217 338 0 15 chr17 30869193 30869261 -54569219 + MER5A DNA MER1_type 86 152 -37 1267 172 34 40 chr17 30869343 30869669 -54568811 - MER33 DNA MER1_type 0 324 1 444 250 61 75 chr17 30869853 30869867 -54568613 - MIR SINE MIR -51 211 198 2505 130 5 20 chr17 30869867 30870260 -54568220 + MLT1B LTR MaLR 1 387 -3 444 250 61 75 chr17 30870260 30870457 -54568023 - MIR SINE MIR -64 198 3 303 307 7 44 chr17 30870859 30870996 -54567484 - MIR SINE MIR -109 153 22 21 36 0 0 chr17 30871440 30871468 -54567012 + AT_rich Low_complexity Low_complexity 1 28 0 2540 134 51 5 chr17 30872626 30872804 -54565676 + MSTA LTR MaLR 1 169 -259 6410 75 13 8 chr17 30872804 30873922 -54564558 + L1PA8A LINE L1 5008 6130 -1 2540 134 51 5 chr17 30873922 30874152 -54564328 + MSTA LTR MaLR 169 428 0 260 308 131 8 chr17 30874179 30874309 -54564171 - MIR SINE MIR 0 262 117 351 0 0 0 chr17 30874341 30874380 -54564100 + (CA)n Simple_repeat Simple_repeat 1 39 0 3604 244 74 11 chr17 30874403 30875438 -54563042 + MER69B DNA AcHobo 43 1143 -83 252 215 89 63 chr17 30875485 30875564 -54562916 + MLT2C1 LTR ERVL 277 357 -40 282 91 0 23 chr17 30875610 30875654 -54562826 + MLT2F LTR ERVL 619 661 -2 496 307 96 9 chr17 30875699 30875917 -54562563 - MIR SINE MIR -11 251 15 232 240 40 30 chr17 30876130 30876230 -54562250 - MIR3 SINE MIR -4 204 104 211 229 0 0 chr17 30876575 30876623 -54561857 + (TAA)n Simple_repeat Simple_repeat 2 49 0 1922 156 3 7 chr17 30876678 30876985 -54561495 - AluJo SINE Alu -6 306 1 286 291 86 6 chr17 30877016 30877161 -54561319 - MIR SINE MIR -63 145 2 225 320 149 11 chr17 30877694 30877869 -54560611 + MIR SINE MIR 21 219 -43 195 276 26 26 chr17 30878159 30878235 -54560245 - MIR SINE MIR -34 228 153 238 305 59 34 chr17 30878433 30878551 -54559929 - MIR SINE MIR -110 152 32 373 295 114 20 chr17 30879713 30879862 -54558618 + MIR3 SINE MIR 3 165 -43 622 318 70 16 chr17 30880123 30880381 -54558099 + LTR16A LTR ERVL 170 441 -9 232 362 55 12 chr17 30881133 30881322 -54557158 + MIR3 SINE MIR 5 202 -60 295 350 10 0 chr17 30881677 30881777 -54556703 + MIR SINE MIR 31 131 -77 209 347 42 11 chr17 30881932 30882027 -54556453 + L2 LINE L2 3198 3295 -18 338 355 51 10 chr17 30882054 30882251 -54556229 - L2 LINE L2 -219 3053 2849 366 186 9 18 chr17 30884086 30884199 -54554281 + CT-rich Low_complexity Low_complexity 1 112 0 1368 23 11 6 chr17 30884232 30884409 -54554071 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 508 241 36 0 chr17 30884632 30884744 -54553736 - MER91C DNA MER1_type -4 136 21 180 250 0 54 chr17 30885218 30885274 -54553206 - MIR SINE MIR -191 71 19 207 261 31 0 chr17 30885456 30885521 -54552959 + MER5A DNA MER1_type 50 116 -73 457 273 171 11 chr17 30885650 30885837 -54552643 - MIR SINE MIR -43 219 3 459 281 83 23 chr17 30886358 30886569 -54551911 + MIR SINE MIR 36 253 -9 645 190 82 92 chr17 30886600 30886784 -54551696 - MER3 DNA MER1_type -6 203 22 579 214 0 0 chr17 30886918 30887016 -54551464 + Tigger3(Golem) DNA MER2_type 2931 3028 -1 231 36 0 0 chr17 30888174 30888202 -54550278 + (T)n Simple_repeat Simple_repeat 1 28 0 1118 133 35 71 chr17 30939914 30940140 -54498340 + MER20 DNA MER1_type 1 218 -1 314 237 0 0 chr17 30941126 30941202 -54497278 + MIR SINE MIR 47 122 -140 285 310 30 0 chr17 30941469 30941569 -54496911 + MER3 DNA MER1_type 52 154 -55 286 171 13 40 chr17 30941591 30941667 -54496813 + MER3 DNA MER1_type 2237 2310 0 660 179 22 71 chr17 30942664 30942848 -54495632 + MER5B DNA MER1_type 4 178 0 313 262 35 90 chr17 30942908 30943053 -54495427 - MIR SINE MIR -68 194 58 321 118 0 0 chr17 30943213 30943264 -54495216 + (CA)n Simple_repeat Simple_repeat 1 51 0 253 263 63 11 chr17 30943889 30943984 -54494496 - MER117 DNA MER1_type -26 171 72 379 287 35 17 chr17 30944058 30944173 -54494307 - MIR SINE MIR -116 146 30 186 287 47 93 chr17 30944240 30944390 -54494090 + L2 LINE L2 2973 3115 -157 239 0 32 0 chr17 30945752 30945783 -54492697 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 2545 62 3 0 chr17 30945814 30946123 -54492357 - AluY SINE Alu -1 310 1 508 168 10 10 chr17 30948141 30948242 -54490238 - MIR3 SINE MIR -7 201 101 185 287 108 32 chr17 30948445 30948602 -54489878 - L2 LINE L2 -172 3100 2932 222 91 0 0 chr17 30948727 30948760 -54489720 + (TGAA)n Simple_repeat Simple_repeat 4 36 0 360 261 194 0 chr17 30948795 30948929 -54489551 - MIR SINE MIR -57 205 46 431 230 115 0 chr17 30949442 30949581 -54488899 - MER5B DNA MER1_type -17 161 7 1093 253 97 102 chr17 30950028 30950626 -54487854 - MLT1G1 LTR MaLR 0 595 1 425 265 108 16 chr17 30950725 30950888 -54487592 - MIR SINE MIR -49 213 30 1112 132 35 75 chr17 30950888 30951115 -54487365 + MER20 DNA MER1_type 1 218 -1 425 265 108 16 chr17 30951115 30951136 -54487344 - MIR SINE MIR -232 30 12 314 237 0 0 chr17 30952101 30952177 -54486303 + MIR SINE MIR 47 122 -140 559 244 0 8 chr17 30952444 30952567 -54485913 + MER3 DNA MER1_type 52 126 -83 1270 154 48 74 chr17 30952568 30952880 -54485600 + MER3 DNA MER1_type 2237 2540 0 26 82 0 0 chr17 30953032 30953093 -54485387 + AT_rich Low_complexity Low_complexity 1 61 0 658 218 0 16 chr17 30953104 30953228 -54485252 - FLAM_A SINE Alu -11 122 1 401 247 0 11 chr17 30953228 30953321 -54485159 + MER3 DNA MER1_type 2494 2585 0 307 279 49 16 chr17 30954393 30954515 -54483965 + MIR SINE MIR 51 176 -86 233 297 0 0 chr17 30955412 30955476 -54483004 + MIR SINE MIR 38 101 -107 253 289 9 61 chr17 30955569 30955683 -54482797 - MIR SINE MIR -152 110 3 45 55 0 0 chr17 30956778 30956851 -54481629 + AT_rich Low_complexity Low_complexity 1 73 0 469 282 24 53 chr17 30956862 30956997 -54481483 + MIR SINE MIR 4 132 -130 2227 89 120 3 chr17 30956997 30957323 -54481157 + THE1B LTR MaLR 1 364 0 469 282 24 53 chr17 30957323 30957393 -54481087 + MIR SINE MIR 132 203 -59 378 266 139 6 chr17 30958888 30959046 -54479434 - MIR3 SINE MIR -13 195 17 197 292 15 0 chr17 30959492 30959557 -54478923 + MIR SINE MIR 89 154 -108 2208 95 0 42 chr17 30959725 30960031 -54478449 - AluY SINE Alu -18 293 1 3920 75 6 0 chr17 30960097 30960607 -54477873 - L1PA8 LINE L1 -2 6170 5658 194 337 22 0 chr17 30961289 30961381 -54477099 + MIR SINE MIR 157 250 -12 1991 120 42 0 chr17 30961962 30962246 -54476234 - AluSg SINE Alu -10 300 5 23 68 0 0 chr17 30962296 30962340 -54476140 + AT_rich Low_complexity Low_complexity 1 44 0 300 266 43 106 chr17 30962350 30962538 -54475942 - L3 LINE CR1 -57 1520 1345 1814 102 0 0 chr17 30962942 30963187 -54475293 - L1PA8 LINE L1 -8 6164 5920 2210 113 10 3 chr17 30963217 30963526 -54474954 + AluSx SINE Alu 2 312 0 238 227 11 80 chr17 30965088 30965176 -54473304 + L1MB8 LINE L1 5594 5675 -489 294 261 25 56 chr17 30965274 30965435 -54473045 + L1MB8 LINE L1 5729 5884 -294 293 390 16 0 chr17 30965605 30965728 -54472752 + L2 LINE L2 3144 3268 -4 378 151 0 0 chr17 30965881 30965954 -54472526 + (TG)n Simple_repeat Simple_repeat 2 74 0 1581 193 9 25 chr17 30966164 30966480 -54472000 + AluJb SINE Alu 1 311 -1 306 303 110 18 chr17 30967371 30967480 -54471000 - L2 LINE L2 0 3313 3195 264 274 10 49 chr17 30967535 30967637 -54470843 + MIR SINE MIR 7 104 -158 292 294 34 42 chr17 30967957 30968076 -54470404 - MIR SINE MIR -143 119 2 831 151 16 0 chr17 30968209 30968335 -54470145 - AluJb SINE Alu -182 130 3 25 0 0 0 chr17 30968347 30968372 -54470108 + AT_rich Low_complexity Low_complexity 1 25 0 236 218 26 26 chr17 30968402 30968480 -54470000 + (TA)n Simple_repeat Simple_repeat 1 78 0 1553 140 33 8 chr17 30968506 30968749 -54469731 - AluSx SINE Alu -9 303 55 815 156 0 0 chr17 30968749 30968871 -54469609 - AluJb SINE Alu -190 122 1 292 200 17 0 chr17 30968871 30968931 -54469549 - MIR SINE MIR -76 186 126 325 206 0 0 chr17 30969031 30969094 -54469386 - MIR SINE MIR -99 163 101 2179 123 0 3 chr17 30969100 30969393 -54469087 + AluSg SINE Alu 1 292 -18 558 242 55 6 chr17 30971253 30971418 -54467062 + MER5B DNA MER1_type 1 173 -5 548 188 0 0 chr17 30971483 30971579 -54466901 - MER5A DNA MER1_type -84 105 10 607 165 43 0 chr17 30971980 30972094 -54466386 + LTR50 LTR ERVL 1 119 -676 325 264 23 11 chr17 30972094 30972181 -54466299 - MER81 DNA DNA 0 114 27 276 202 140 53 chr17 30972190 30972304 -54466176 + LTR50 LTR ERVL 109 232 -563 180 0 0 0 chr17 30972324 30972344 -54466136 + (CAG)n Simple_repeat Simple_repeat 1 20 0 461 267 157 13 chr17 30972427 30972663 -54465817 + LTR50 LTR ERVL 526 795 0 211 369 70 0 chr17 30972807 30972964 -54465516 - L2 LINE L2 -180 3092 2925 248 0 31 0 chr17 30973322 30973354 -54465126 + (CA)n Simple_repeat Simple_repeat 2 34 0 338 300 0 0 chr17 30973630 30973700 -54464780 + MER81 DNA DNA 1 70 -44 958 156 0 7 chr17 30974303 30974457 -54464023 - LTR32 LTR ERVL -2 469 317 254 108 0 0 chr17 30974599 30974636 -54463844 - LTR32 LTR ERVL -119 352 316 1701 185 44 47 chr17 30974638 30974979 -54463501 - LTR32 LTR ERVL -122 349 10 571 306 128 29 chr17 30974979 30975565 -54462915 + L3 LINE CR1 822 1465 -112 625 251 56 20 chr17 30975619 30975814 -54462666 + L2 LINE L2 3102 3303 -10 35 54 0 0 chr17 30976747 30976803 -54461677 + AT_rich Low_complexity Low_complexity 1 56 0 547 320 29 37 chr17 30977323 30977567 -54460913 - MIR SINE MIR -7 255 14 290 309 143 6 chr17 30977995 30978163 -54460317 + MIR SINE MIR 1 191 -71 1093 32 0 0 chr17 30979254 30979379 -54459101 - AluY SINE Alu -14 297 173 226 264 75 57 chr17 30979712 30979818 -54458662 + MIR SINE MIR 41 148 -60 245 299 117 15 chr17 30981385 30981522 -54456958 - MIR SINE MIR -49 213 63 577 302 19 15 chr17 30981850 30982055 -54456425 - MIR SINE MIR -51 211 6 401 308 89 14 chr17 30982265 30982479 -54456001 - L2 LINE L2 -482 2832 2603 186 43 0 0 chr17 30982821 30982844 -54455636 + (TAAAA)n Simple_repeat Simple_repeat 2 24 0 899 162 132 25 chr17 30984137 30984334 -54454146 - MER20 DNA MER1_type -1 218 1 191 191 71 0 chr17 30985899 30985941 -54452539 - MIR SINE MIR -32 230 186 200 392 108 0 chr17 30986227 30986329 -54452151 + L2 LINE L2 3158 3270 -2 240 320 72 10 chr17 30986359 30986456 -54452024 + MIR SINE MIR 38 140 -68 335 305 80 13 chr17 30987865 30988016 -54450464 + MIR SINE MIR 49 209 -53 345 131 0 0 chr17 30988148 30988209 -54450271 + (ATG)n Simple_repeat Simple_repeat 1 61 0 200 138 0 62 chr17 30988513 30988578 -54449902 + (GGAGAA)n Simple_repeat Simple_repeat 5 65 0 578 277 134 9 chr17 30988645 30988876 -54449604 + MIR SINE MIR 1 260 -2 574 224 6 6 chr17 30988897 30989076 -54449404 + (TAG)n Simple_repeat Simple_repeat 2 180 0 212 349 24 0 chr17 30990103 30990186 -54448294 - MIR3 SINE MIR -34 174 90 182 364 0 0 chr17 30991413 30991490 -54446990 + MIR3 SINE MIR 115 191 -17 232 358 0 0 chr17 30991543 30991610 -54446870 - L2 LINE L2 0 3272 3206 213 311 0 0 chr17 30991881 30991942 -54446538 + GA-rich Low_complexity Low_complexity 1 61 0 1511 167 44 34 chr17 30992211 30992505 -54445975 - AluJo SINE Alu -10 302 6 344 291 182 0 chr17 30992586 30992751 -54445729 + MIR SINE MIR 56 250 -12 266 290 0 0 chr17 30993390 30993452 -54445028 - L2 LINE L2 -42 3230 3169 391 289 107 53 chr17 30993499 30993873 -54444607 + L1ME4a LINE L1 5538 5931 -190 198 171 0 0 chr17 30993981 30994016 -54444464 - MIR SINE MIR -111 151 117 565 103 82 0 chr17 30994933 30995030 -54443450 - L1MA5 LINE L1 0 6300 6196 1312 247 28 32 chr17 30996180 30996419 -54442061 - MER113 DNA MER1_type? -89 432 194 2162 124 3 13 chr17 30996419 30996734 -54441746 - AluSp SINE Alu -1 312 1 1312 247 28 32 chr17 30996734 30996927 -54441553 - MER113 DNA MER1_type? -327 194 2 1235 21 0 0 chr17 30998147 30998289 -54440191 + L1HS LINE L1 6014 6155 0 1064 249 81 42 chr17 30998359 30998792 -54439688 - L1ME3A LINE L1 -95 6075 5626 477 228 84 71 chr17 30998836 30999094 -54439386 - L1ME LINE L1 -306 5860 5596 297 258 60 34 chr17 30999886 31000058 -54438422 - MIR SINE MIR -59 149 9 339 25 0 0 chr17 31000705 31000745 -54437735 + (TG)n Simple_repeat Simple_repeat 1 40 0 797 236 6 0 chr17 31000745 31000902 -54437578 - MER58A DNA MER1_type -25 199 42 4293 183 38 22 chr17 31000903 31001306 -54437174 + L1MB8 LINE L1 4918 5313 -865 1830 167 0 3 chr17 31001306 31001593 -54436887 + AluJo SINE Alu 1 286 -26 186 43 0 0 chr17 31001596 31001619 -54436861 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 4293 183 38 22 chr17 31001619 31002445 -54436035 + L1MB8 LINE L1 5314 6173 -5 282 207 0 35 chr17 31002458 31002516 -54435964 - MER58A DNA MER1_type -168 56 1 183 387 54 9 chr17 31002526 31002637 -54435843 - L2 LINE L2 -40 3232 3117 234 0 0 0 chr17 31002750 31002776 -54435704 + (T)n Simple_repeat Simple_repeat 1 26 0 187 338 0 13 chr17 31002792 31002869 -54435611 - L2 LINE L2 -614 2700 2625 23 0 0 0 chr17 31002901 31002924 -54435556 + AT_rich Low_complexity Low_complexity 1 23 0 340 287 61 0 chr17 31003273 31003388 -54435092 + MIR SINE MIR 125 246 -16 248 296 17 43 chr17 31004921 31005036 -54433444 - L2 LINE L2 0 3272 3161 3193 159 7 25 chr17 31005036 31005633 -54432847 + LTR60 LTR ERV1 1 586 0 470 214 9 56 chr17 31006017 31006200 -54432280 + MIR SINE MIR 38 210 -52 1013 136 38 16 chr17 31007104 31007288 -54431192 - MER53 DNA DNA 0 189 2 219 235 20 0 chr17 31007983 31008034 -54430446 + L2 LINE L2 3261 3312 -1 25 0 0 0 chr17 31008807 31008832 -54429648 + AT_rich Low_complexity Low_complexity 1 25 0 296 298 90 56 chr17 31008851 31009029 -54429451 + MIR SINE MIR 8 191 -71 386 269 59 38 chr17 31009304 31009490 -54428990 - MIR SINE MIR -25 237 48 44174 46 6 1 chr17 31009938 31016052 -54422428 + L1PA4 LINE L1 1 6147 -8 198 0 0 0 chr17 31016071 31016093 -54422387 + (TGAA)n Simple_repeat Simple_repeat 4 25 0 516 217 47 23 chr17 31016699 31016828 -54421652 - MIR SINE MIR -126 136 5 476 254 103 63 chr17 31016893 31017261 -54421219 + LTR33 LTR ERVL 38 456 -65 387 263 17 0 chr17 31018080 31018198 -54420282 + MIR SINE MIR 132 251 -11 268 335 65 27 chr17 31018286 31018471 -54420009 - MIR SINE MIR -51 211 20 191 381 0 0 chr17 31018520 31018583 -54419897 + L2 LINE L2 3000 3062 -210 211 350 32 32 chr17 31018703 31018826 -54419654 + L2 LINE L2 3133 3255 -17 425 252 66 64 chr17 31018837 31019149 -54419331 - MLT1I LTR MaLR -2 407 59 183 80 0 0 chr17 31019309 31019334 -54419146 + (CA)n Simple_repeat Simple_repeat 2 26 0 374 294 216 0 chr17 31019565 31019718 -54418762 + MER5A DNA MER1_type 4 189 0 257 292 101 77 chr17 31020025 31020361 -54418119 - L2 LINE L2 -12 3260 2917 259 189 38 0 chr17 31020652 31020705 -54417775 + Tigger5 DNA MER2_type 1 55 -2268 454 211 0 22 chr17 31020766 31020856 -54417624 - Tigger5 DNA MER2_type -2235 88 1 516 165 0 12 chr17 31020869 31020954 -54417526 + Tigger5 DNA MER2_type 2239 2322 -1 285 267 0 50 chr17 31020993 31021094 -54417386 - L2 LINE L2 -181 3091 2996 545 216 0 16 chr17 31021974 31022099 -54416381 - MIR3 SINE MIR 0 208 86 186 298 83 24 chr17 31022602 31022686 -54415794 - L2 LINE L2 -39 3233 3145 888 209 30 0 chr17 31022846 31023047 -54415433 - MER3 DNA MER1_type -1 208 2 253 319 174 0 chr17 31023227 31023434 -54415046 - MIR SINE MIR -6 256 14 851 305 53 30 chr17 31024851 31025244 -54413236 - L2 LINE L2 -16 3297 2896 350 263 70 9 chr17 31026127 31026241 -54412239 + MIR SINE MIR 26 146 -116 466 340 16 10 chr17 31026253 31026447 -54412033 + MER117 DNA MER1_type 1 195 -2 387 105 0 0 chr17 31027130 31027187 -54411293 + (TG)n Simple_repeat Simple_repeat 2 58 0 388 271 57 29 chr17 31027331 31027471 -54411009 + MIR SINE MIR 13 156 -106 206 339 21 23 chr17 31027811 31027906 -54410574 + MIR SINE MIR 27 122 -86 1962 136 0 0 chr17 31027957 31028229 -54410251 - AluSx SINE Alu -4 308 37 690 265 14 39 chr17 31028615 31028832 -54409648 + MIR SINE MIR 3 212 -50 285 344 49 8 chr17 31030182 31030304 -54408176 + L2 LINE L2 3145 3271 -1 255 246 27 82 chr17 31030445 31030555 -54407925 - MARNA DNA Mariner -92 494 391 1429 231 53 11 chr17 31030954 31031023 -54407457 - L1MD3 LINE L1 -11 7984 7919 2153 106 0 3 chr17 31031023 31031324 -54407156 - AluY SINE Alu -11 300 1 1429 231 53 11 chr17 31031324 31031614 -54406866 - L1MD3 LINE L1 -76 7919 7610 703 47 0 0 chr17 31031849 31031934 -54406546 + AluY SINE Alu 215 299 -12 279 309 0 0 chr17 31031934 31032015 -54406465 + MARNA DNA Mariner 397 477 -109 396 175 25 12 chr17 31032151 31032231 -54406249 - L1MD3 LINE L1 -278 7717 7637 300 266 0 0 chr17 31032664 31032728 -54405752 + MER91 DNA MER1_type 77 140 0 209 323 111 10 chr17 31034296 31034395 -54404085 - L2 LINE L2 -26 3246 3138 198 395 0 0 chr17 31034432 31034508 -54403972 + MIR3 SINE MIR 133 208 0 372 270 95 0 chr17 31034982 31035119 -54403361 + LTR67 LTR ERVL 401 550 -7 541 183 98 46 chr17 31036234 31036387 -54402093 - MER103 DNA DNA -2 164 4 2425 77 3 0 chr17 31036673 31036985 -54401495 + AluSp SINE Alu 1 313 0 549 263 160 0 chr17 31037025 31037181 -54401299 + MER5A DNA MER1_type 9 189 0 480 303 67 0 chr17 31037191 31037356 -54401124 - MER5B DNA MER1_type -2 176 1 216 0 0 0 chr17 31037936 31037960 -54400520 + (T)n Simple_repeat Simple_repeat 1 24 0 250 290 0 16 chr17 31038023 31038085 -54400395 - MIR SINE MIR -182 80 20 1298 149 73 120 chr17 31038604 31038920 -54399560 - AluJb SINE Alu -1 301 1 222 279 0 39 chr17 31041190 31041294 -54397186 + GA-rich Low_complexity Low_complexity 2 101 0 189 383 21 0 chr17 31041576 31041670 -54396810 + L2 LINE L2 3208 3303 -10 1019 293 0 0 chr17 31042684 31042916 -54395564 + MIR SINE MIR 29 260 -2 399 232 320 31 chr17 31043036 31043230 -54395250 - MIR SINE MIR 0 262 13 707 344 59 11 chr17 31043244 31043514 -54394966 + L2 LINE L2 3025 3307 -6 184 234 52 13 chr17 31043610 31043687 -54394793 - L2 LINE L2 -252 3061 2982 423 295 68 14 chr17 31044038 31044245 -54394235 - MLT1J LTR MaLR -1 510 293 433 274 19 9 chr17 31044316 31044422 -54394058 - MLT1J LTR MaLR -332 179 73 2160 102 13 0 chr17 31044652 31044955 -54393525 + AluSp SINE Alu 1 307 -6 1658 132 49 3 chr17 31045005 31045314 -54393166 + AluSx SINE Alu 1 312 0 2192 73 7 0 chr17 31045491 31045778 -54392702 + AluSp SINE Alu 1 289 -24 194 0 0 37 chr17 31045788 31045815 -54392665 + (TAAA)n Simple_repeat Simple_repeat 3 28 0 328 310 30 0 chr17 31045964 31046064 -54392416 + MIR SINE MIR 160 262 0 461 276 52 8 chr17 31046619 31046753 -54391727 - MIR SINE MIR -13 249 110 407 274 0 19 chr17 31047420 31047526 -54390954 - MIR SINE MIR -127 135 32 202 287 135 54 chr17 31048159 31048493 -54389987 + L2 LINE L2 1556 1916 -1398 685 278 128 62 chr17 31049001 31049375 -54389105 + MLT1K LTR MaLR 190 588 0 275 297 118 17 chr17 31049555 31049689 -54388791 + MIR SINE MIR 1 146 -62 319 191 0 59 chr17 31050509 31050577 -54387903 - L2 LINE L2 -8 3264 3201 384 119 0 0 chr17 31050650 31050709 -54387771 + (CA)n Simple_repeat Simple_repeat 2 60 0 231 167 0 0 chr17 31050740 31050782 -54387698 + (CA)n Simple_repeat Simple_repeat 1 42 0 208 360 22 7 chr17 31050892 31051028 -54387452 + L2 LINE L2 2918 3055 -217 180 300 0 0 chr17 31051161 31051201 -54387279 + L2 LINE L2 3186 3225 -47 5982 94 16 51 chr17 31052129 31053515 -54384965 + L1PA16 LINE L1 4809 6157 -9 328 320 0 0 chr17 31053753 31053856 -54384624 + MIR SINE MIR 155 257 -5 626 284 92 5 chr17 31053942 31054160 -54384320 + MIR SINE MIR 8 244 -18 222 284 40 0 chr17 31054844 31054918 -54383562 - MIR3 SINE MIR -53 155 79 237 344 11 11 chr17 31054978 31055071 -54383409 + MIR SINE MIR 54 146 -116 336 102 0 0 chr17 31055072 31055121 -54383359 + (TTCC)n Simple_repeat Simple_repeat 3 51 0 225 358 11 11 chr17 31055133 31055228 -54383252 - MER81 DNA DNA 0 114 20 344 270 0 0 chr17 31055256 31055330 -54383150 - L2 LINE L2 -50 3263 3190 340 319 96 31 chr17 31055374 31055603 -54382877 - MIR SINE MIR -3 259 16 293 244 232 0 chr17 31056171 31056253 -54382227 - MIR3 SINE MIR -26 182 82 313 241 58 138 chr17 31056714 31056964 -54381516 + MIR SINE MIR 2 250 -12 314 227 100 57 chr17 31057909 31058068 -54380412 + MIR3 SINE MIR 8 183 -55 336 247 37 0 chr17 31059004 31059085 -54379395 - MIR SINE MIR -26 236 153 3342 124 4 17 chr17 31059085 31059602 -54378878 - Tigger4(Zombi) DNA MER2_type 0 2731 2222 937 152 0 33 chr17 31059630 31059726 -54378754 - Tigger4(Zombi) DNA MER2_type -2585 146 55 1974 128 0 7 chr17 31059726 31060022 -54378458 - AluSx SINE Alu -18 294 1 937 152 0 33 chr17 31060022 31060076 -54378404 - Tigger4(Zombi) DNA MER2_type -2676 55 1 1528 247 8 22 chr17 31060088 31060456 -54378024 + MLT1A1 LTR MaLR 3 365 0 461 225 36 9 chr17 31060456 31060567 -54377913 - MIR SINE MIR -107 155 42 926 67 0 0 chr17 31063686 31063851 -54374629 - AluY SINE Alu 0 325 161 1936 171 90 43 chr17 31063880 31064347 -54374133 - LTR2B LTR ERV1 0 490 2 1509 161 41 32 chr17 31065003 31065215 -54373265 + MER33 DNA MER1_type 6 214 -2371 2129 109 3 31 chr17 31065215 31065535 -54372945 + AluSp SINE Alu 1 311 -2 189 0 0 0 chr17 31065535 31065556 -54372924 + (TA)n Simple_repeat Simple_repeat 1 21 0 1509 161 41 32 chr17 31065556 31065658 -54372822 + MER33 DNA MER1_type 213 324 0 673 231 230 48 chr17 31065747 31066228 -54372252 + L2 LINE L2 2714 3308 -5 389 290 24 96 chr17 31066571 31066905 -54371575 - L3 LINE CR1 -6 1571 1262 414 269 39 113 chr17 31067149 31067405 -54371075 - L2 LINE L2 -9 3263 3027 621 290 92 66 chr17 31067877 31068270 -54370210 + L2 LINE L2 2870 3272 0 465 313 60 37 chr17 31068364 31068581 -54369899 - MIR SINE MIR -33 229 8 587 247 13 13 chr17 31068750 31068900 -54369580 + MIR SINE MIR 61 210 -52 286 263 123 9 chr17 31069498 31069612 -54368868 + MIR3 SINE MIR 78 204 -4 236 285 133 35 chr17 31069607 31069752 -54368728 + MIR SINE MIR 82 249 -13 * 1954 123 11 0 chr17 31069907 31070192 -54368288 - AluSx SINE Alu -24 288 1 353 280 280 12 chr17 31070224 31070481 -54367999 - L1ME4a LINE L1 0 6121 5796 308 352 119 0 chr17 31071277 31071470 -54367010 - MIR SINE MIR 0 262 47 293 335 37 50 chr17 31072042 31072203 -54366277 - MIR3 SINE MIR -44 164 6 * 324 286 92 17 chr17 31072188 31072307 -54366173 - MIR3 SINE MIR -46 162 35 339 25 0 0 chr17 31073324 31073364 -54365116 + (TTCC)n Simple_repeat Simple_repeat 3 42 0 338 282 129 52 chr17 31073388 31073636 -54364844 - L2 LINE L2 -46 3267 3001 260 378 22 18 chr17 31073731 31073956 -54364524 - L2 LINE L2 -499 2815 2590 554 272 69 29 chr17 31075135 31075308 -54363172 - MIR3 SINE MIR -10 198 19 415 274 89 7 chr17 31075814 31075949 -54362531 - MIR SINE MIR -70 192 47 225 228 30 89 chr17 31076262 31076363 -54362117 - MIR SINE MIR -72 190 96 180 0 0 0 chr17 31076486 31076506 -54361974 + (A)n Simple_repeat Simple_repeat 1 20 0 398 312 36 29 chr17 31076534 31076672 -54361808 - MIR SINE MIR -15 247 109 338 357 103 23 chr17 31076691 31077089 -54361391 - L1MEd LINE L1 -5368 751 322 240 303 78 64 chr17 31077881 31078099 -54360381 + MIR SINE MIR 21 241 -21 351 294 48 32 chr17 31079295 31079421 -54359059 - L2 LINE L2 0 3272 3145 342 298 30 30 chr17 31080275 31080406 -54358074 - L2 LINE L2 -220 3052 2922 286 347 58 28 chr17 31080714 31080906 -54357574 - MIR SINE MIR -44 218 25 255 170 21 0 chr17 31081220 31081267 -54357213 - L3 LINE CR1 -5 1572 1525 409 291 27 67 chr17 31081385 31081626 -54356854 + MIR SINE MIR 13 248 -14 1335 231 47 3 chr17 31081657 31081955 -54356525 - MER58B DNA MER1_type 0 341 31 514 297 18 12 chr17 31082479 31082644 -54355836 + MIR SINE MIR 97 262 0 199 348 36 27 chr17 31083439 31083551 -54354929 - MIR SINE MIR -75 133 21 276 320 118 26 chr17 31083800 31083953 -54354527 + MIR SINE MIR 32 198 -64 * 853 306 0 16 chr17 31083949 31084191 -54354289 - MIR SINE MIR 0 262 25 2087 112 0 34 chr17 31084366 31084687 -54353793 - AluSx SINE Alu -2 310 1 319 266 9 44 chr17 31084756 31084869 -54353611 + L1ME3A LINE L1 6062 6170 0 396 270 51 22 chr17 31084882 31085060 -54353420 + L1MC4 LINE L1 7860 8042 0 240 255 0 0 chr17 31085519 31085570 -54352910 + L2 LINE L2 3016 3066 -247 182 286 60 12 chr17 31085617 31085701 -54352779 + MIR SINE MIR 129 216 -46 350 296 43 0 chr17 31086025 31086140 -54352340 - MIR SINE MIR -58 204 85 344 188 43 29 chr17 31086963 31087032 -54351448 - L2 LINE L2 -3 3310 3241 316 294 169 22 chr17 31087821 31088005 -54350475 + MIR SINE MIR 33 243 -19 1527 284 9 39 chr17 31090019 31090391 -54348089 + LTR16A LTR ERVL 1 358 -92 1917 104 7 55 chr17 31090391 31090699 -54347781 - AluSc SINE Alu -16 293 1 1527 284 9 39 chr17 31090699 31090790 -54347690 + LTR16A LTR ERVL 358 450 0 461 349 35 12 chr17 31090863 31091032 -54347448 - MIR SINE MIR -70 192 20 390 229 0 0 chr17 31091053 31091149 -54347331 + GA-rich Low_complexity Low_complexity 3 98 0 821 248 58 16 chr17 31091159 31091401 -54347079 - MIR SINE MIR -5 257 6 287 380 30 0 chr17 31092077 31092177 -54346303 + L2 LINE L2 2951 3053 -219 339 265 0 0 chr17 31092222 31092290 -54346190 + MIR SINE MIR 57 124 -138 283 250 0 0 chr17 31092416 31092472 -54346008 + L2 LINE L2 3258 3313 0 21 0 0 0 chr17 31092803 31092824 -54345656 + AT_rich Low_complexity Low_complexity 1 21 0 1079 179 32 32 chr17 31093175 31093393 -54345087 + MER20 DNA MER1_type 1 218 -1 209 242 61 15 chr17 31094009 31094075 -54344405 - MIR SINE MIR -70 192 124 377 253 13 0 chr17 31094851 31094930 -54343550 - MER5A DNA MER1_type -97 92 13 311 176 162 0 chr17 31095117 31095191 -54343289 + MER103 DNA DNA 1 86 -80 943 261 65 70 chr17 31095274 31095733 -54342747 + L2 LINE L2 2849 3305 -8 371 230 50 20 chr17 31096160 31096260 -54342220 - MIR SINE MIR -65 197 95 557 240 112 66 chr17 31096437 31096633 -54341847 - MIR SINE MIR 0 262 58 342 286 71 7 chr17 31096930 31097070 -54341410 - MIR3 SINE MIR -30 178 30 333 47 0 0 chr17 31097090 31097133 -54341347 + (CCAA)n Simple_repeat Simple_repeat 4 46 0 367 289 16 33 chr17 31097432 31097553 -54340927 - L2 LINE L2 -191 3081 2963 204 261 0 0 chr17 31097685 31097731 -54340749 - L2 LINE L2 -11 3261 3216 1808 107 50 36 chr17 31097739 31098020 -54340460 + THE1B LTR MaLR 80 364 0 652 268 54 60 chr17 31098233 31098547 -54339933 + LTR16A1 LTR ERVL 146 457 0 246 348 118 14 chr17 31099294 31099581 -54338899 - L2 LINE L2 -666 2648 2332 560 191 213 20 chr17 31099598 31099803 -54338677 + MIR SINE MIR 18 252 -10 22 0 0 0 chr17 31099806 31099828 -54338652 + AT_rich Low_complexity Low_complexity 1 22 0 185 270 240 0 chr17 31100049 31100149 -54338331 - L2 LINE L2 -13 3259 3136 471 295 47 42 chr17 31100664 31100854 -54337626 - MIR3 SINE MIR -15 193 3 217 281 167 9 chr17 31101432 31101546 -54336934 + MIR3 SINE MIR 2 133 -75 359 271 65 9 chr17 31102181 31102288 -54336192 + MLT1L LTR MaLR 433 545 -70 276 279 79 14 chr17 31102381 31102521 -54335959 + L1ME4a LINE L1 5711 5859 -262 432 305 44 55 chr17 31102651 31102923 -54335557 + L1ME4a LINE L1 5852 6120 -1 316 248 26 68 chr17 31104715 31104832 -54333648 - MIR SINE MIR -110 152 41 2197 254 111 8 chr17 31104908 31105627 -54332853 + LTR50 LTR ERVL 1 793 -2 23 0 0 0 chr17 31105653 31105676 -54332804 + AT_rich Low_complexity Low_complexity 1 23 0 228 125 18 107 chr17 31105720 31105776 -54332704 + L2 LINE L2 3263 3313 0 2596 111 8 0 chr17 31107010 31107371 -54331109 - THE1B LTR MaLR 0 364 1 10390 99 36 48 chr17 31107371 31108970 -54329510 - THE1B-int LTR MaLR 0 1580 1 2095 164 45 33 chr17 31108971 31109514 -54328966 - MLT2A2 LTR ERVL -1 553 3 1196 300 96 30 chr17 31109517 31110057 -54328423 + MLT1K LTR MaLR 10 585 -3 331 328 167 20 chr17 31110142 31110418 -54328062 + L2 LINE L2 2728 3036 -236 189 217 171 85 chr17 31110476 31110605 -54327875 + L2 LINE L2 3174 3313 0 226 260 0 0 chr17 31111943 31111993 -54326487 - L2 LINE L2 -219 3053 3004 213 143 0 29 chr17 31111992 31112027 -54326453 + L2 LINE L2 3258 3291 -22 * 180 229 62 0 chr17 31112497 31112545 -54325935 + L2 LINE L2 3004 3054 -218 358 258 47 55 chr17 31112709 31112837 -54325643 - MIR SINE MIR -122 140 14 279 235 175 0 chr17 31113057 31113201 -54325279 - MIR3 SINE MIR 0 208 35 201 183 28 28 chr17 31113230 31113301 -54325179 + (TTATA)n Simple_repeat Simple_repeat 5 75 0 298 319 106 9 chr17 31113524 31113637 -54324843 + MIR SINE MIR 19 142 -66 446 292 97 0 chr17 31113688 31113832 -54324648 - MER117 DNA MER1_type -33 164 7 196 231 209 22 chr17 31114445 31114536 -54323944 + MIR SINE MIR 21 128 -80 557 299 70 6 chr17 31114807 31114964 -54323516 - MIR SINE MIR -95 167 1 629 254 0 36 chr17 31115249 31115414 -54323066 - MIR SINE MIR -96 166 8 539 261 83 24 chr17 31115891 31116086 -54322394 + MIR SINE MIR 12 213 -49 289 239 45 23 chr17 31116254 31116342 -54322138 - MIR SINE MIR -70 192 103 1456 211 3 20 chr17 31116871 31117170 -54321310 - AluJb SINE Alu -18 294 1 240 235 73 0 chr17 31117384 31117452 -54321028 - MIR SINE MIR -34 228 156 791 186 0 32 chr17 31117465 31117621 -54320859 + MER45A DNA AcHobo 28 178 0 287 200 100 14 chr17 31117621 31117691 -54320789 - MIR SINE MIR -97 165 90 328 273 70 23 chr17 31118653 31118781 -54319699 - MER5B DNA MER1_type -41 137 4 229 153 0 119 chr17 31118919 31118978 -54319502 + L2 LINE L2 3221 3272 0 1247 256 92 24 chr17 31119063 31119517 -54318963 - LTR16C LTR ERVL -2 489 5 1279 156 33 0 chr17 31119701 31119913 -54318567 - MER20 DNA MER1_type 0 219 1 248 224 0 0 chr17 31121053 31121102 -54317378 + (CA)n Simple_repeat Simple_repeat 1 49 0 180 348 174 0 chr17 31121337 31121429 -54317051 - MIR SINE MIR -74 134 27 228 341 8 48 chr17 31121609 31121735 -54316745 - MIR SINE MIR -42 220 100 188 320 50 50 chr17 31121838 31121938 -54316542 + L2 LINE L2 3208 3307 -6 226 239 56 14 chr17 31122524 31122595 -54315885 + MIR3 SINE MIR 89 162 -46 193 328 0 0 chr17 31123701 31123762 -54314718 + MIR3 SINE MIR 117 177 -31 343 410 11 6 chr17 31123803 31123981 -54314499 + MIR3 SINE MIR 16 194 -14 393 22 0 0 chr17 31124237 31124283 -54314197 + (TCCA)n Simple_repeat Simple_repeat 4 49 0 1092 252 6 55 chr17 31124436 31124761 -54313719 + L2 LINE L2 3005 3313 0 263 361 49 8 chr17 31124974 31125096 -54313384 + L2 LINE L2 3145 3271 -1 255 246 27 82 chr17 31125239 31125349 -54313131 - MARNA DNA Mariner -92 494 391 851 270 58 14 chr17 31125749 31125821 -54312659 - L1MD3 LINE L1 -11 7984 7917 1821 159 0 10 chr17 31125821 31126135 -54312345 - AluY SINE Alu 0 311 1 851 270 58 14 chr17 31126135 31126340 -54312140 - L1MD3 LINE L1 -78 7917 7695 28961 38 4 5 chr17 31326350 31330624 -54107856 + L1PA4 LINE L1 1887 6155 0 30 0 0 0 chr17 31330624 31330654 -54107826 + AT_rich Low_complexity Low_complexity 1 30 0 39 22 0 0 chr17 31334194 31334240 -54104240 + GC_rich Low_complexity Low_complexity 1 46 0 240 313 0 0 chr17 31334484 31334567 -54103913 + G-rich Low_complexity Low_complexity 1 83 0 208 336 69 8 chr17 31334584 31334715 -54103765 - MIR SINE MIR -61 201 63 380 289 0 0 chr17 31334964 31335078 -54103402 - MIR SINE MIR -71 191 78 181 259 0 69 chr17 31335183 31335241 -54103239 - L2 LINE L2 -30 3283 3230 220 276 90 8 chr17 31335606 31335740 -54102740 + MIR SINE MIR 74 218 -44 2255 249 57 27 chr17 31335983 31336785 -54101695 + L1ME1 LINE L1 5338 6119 -47 1371 305 21 14 chr17 31336918 31337400 -54101080 + L1ME3A LINE L1 5679 6163 -7 348 24 0 0 chr17 31338195 31338236 -54100244 + (CA)n Simple_repeat Simple_repeat 1 41 0 190 289 133 11 chr17 31338987 31339077 -54099403 - L2 LINE L2 -19 3253 3153 336 331 23 8 chr17 31339603 31339733 -54098747 + MIR3 SINE MIR 23 154 -54 896 302 122 21 chr17 31339920 31340394 -54098086 + MLT1H1 LTR MaLR 34 555 0 448 283 94 26 chr17 31341012 31341245 -54097235 - MIR SINE MIR -1 261 13 282 286 124 0 chr17 31341317 31341422 -54097058 - L2 LINE L2 0 3272 3155 216 0 0 0 chr17 31341593 31341617 -54096863 + (A)n Simple_repeat Simple_repeat 1 24 0 1051 220 33 4 chr17 31341624 31341869 -54096611 + MLT1H LTR MaLR 5 256 -293 212 362 43 0 chr17 31341886 31341980 -54096500 - L2 LINE L2 -41 3272 3175 267 366 42 10 chr17 31342074 31342412 -54096068 - L3 LINE CR1 -118 1459 1069 347 276 57 0 chr17 31342646 31342751 -54095729 + MIR SINE MIR 29 139 -123 1570 188 22 7 chr17 31343098 31343397 -54095083 + AluJb SINE Alu 3 305 0 295 263 38 53 chr17 31345393 31345526 -54092954 + MIR SINE MIR 14 144 -118 312 27 0 0 chr17 31345899 31345936 -54092544 + (CA)n Simple_repeat Simple_repeat 2 38 0 234 81 0 0 chr17 31345936 31345973 -54092507 + (GA)n Simple_repeat Simple_repeat 1 37 0 299 192 13 0 chr17 31346114 31346192 -54092288 + (TTCA)n Simple_repeat Simple_repeat 1 79 0 2299 103 0 7 chr17 31346689 31346989 -54091491 - AluSq SINE Alu -15 298 1 211 322 0 0 chr17 31346993 31347052 -54091428 + CT-rich Low_complexity Low_complexity 3 61 0 650 273 19 57 chr17 31347590 31347854 -54090626 - MIR SINE MIR 0 262 9 199 362 29 9 chr17 31348868 31348973 -54089507 - L2 LINE L2 -44 3269 3163 294 378 29 18 chr17 31348999 31349311 -54089169 - L2 LINE L2 -257 3015 2698 330 217 36 58 chr17 31349320 31349458 -54089022 - L1MC5 LINE L1 -44 7917 7783 1604 198 149 30 chr17 31349499 31349970 -54088510 - L1ME2 LINE L1 -10 6154 5628 497 295 98 26 chr17 31349987 31350221 -54088259 - L2 LINE L2 -634 2680 2430 512 274 61 12 chr17 31350448 31350612 -54087868 + MER117 DNA MER1_type 2 173 -24 210 118 0 0 chr17 31351136 31351170 -54087310 + (TTCA)n Simple_repeat Simple_repeat 4 37 0 228 363 52 36 chr17 31351316 31351509 -54086971 - L2 LINE L2 -216 3056 2861 436 324 84 0 chr17 31352875 31353054 -54085426 - MIR SINE MIR -15 247 54 15562 197 14 7 chr17 31353070 31359597 -54078883 + L1PB1 LINE L1 6 6867 0 453 296 33 21 chr17 31359943 31360183 -54078297 - MIR SINE MIR -6 256 14 767 238 0 17 chr17 31360386 31360567 -54077913 + MER5B DNA MER1_type 1 178 0 351 311 106 61 chr17 31361380 31361692 -54076788 + L1ME4a LINE L1 5354 5679 -442 375 268 45 36 chr17 31361695 31361877 -54076603 + L1ME4a LINE L1 5710 5896 -225 280 240 42 52 chr17 31362369 31362465 -54076015 + MER81 DNA DNA 20 114 0 560 287 19 0 chr17 31362553 31362710 -54075770 + MIR3 SINE MIR 33 192 -16 648 279 18 0 chr17 31363093 31363258 -54075222 - MER63A DNA MER1_type -4 206 39 824 176 25 18 chr17 31363259 31363517 -54074963 + CT-rich Low_complexity Low_complexity 1 259 0 274 362 26 13 chr17 31363913 31364065 -54074415 + MIR SINE MIR 20 173 -89 2252 106 7 0 chr17 31365623 31365916 -54072564 + AluSx SINE Alu 1 295 -17 302 217 142 19 chr17 31366445 31366551 -54071929 - MIR SINE MIR -86 176 58 435 299 111 11 chr17 31366594 31366945 -54071535 - L1ME4a LINE L1 -10 6111 5726 481 253 0 0 chr17 31367194 31367293 -54071187 - MER58A DNA MER1_type -1 223 125 664 197 0 33 chr17 31367335 31367457 -54071023 - MER58A DNA MER1_type 0 118 1 846 197 6 11 chr17 31368134 31368312 -54070168 + MER5A DNA MER1_type 13 189 0 182 291 137 8 chr17 31368353 31368470 -54070010 - MIR SINE MIR -35 227 96 2348 107 3 0 chr17 31368850 31369160 -54069320 - AluSx SINE Alu -1 311 1 265 315 0 11 chr17 31369396 31369488 -54068992 + MIR SINE MIR 48 138 -70 344 263 183 0 chr17 31369697 31369887 -54068593 + L2 LINE L2 2795 3016 -297 1208 131 11 0 chr17 31369894 31370070 -54068410 - AluSg/x SINE Alu 0 312 135 2317 91 3 7 chr17 31370073 31370380 -54068100 - AluSq SINE Alu -7 306 1 340 276 29 22 chr17 31371067 31371228 -54067252 - MIR SINE MIR -46 162 11 282 353 81 41 chr17 31372077 31372397 -54066083 + L2 LINE L2 2919 3251 -21 517 342 82 46 chr17 31373111 31373749 -54064731 + L2 LINE L2 2600 3255 -17 352 250 68 0 chr17 31373752 31373840 -54064640 + MER96 DNA MER1_type? 2 95 -80 238 333 59 0 chr17 31374285 31374387 -54064093 + MER91C DNA MER1_type 1 108 -32 223 320 57 41 chr17 31374760 31374882 -54063598 - MIR3 SINE MIR -19 189 66 375 309 77 6 chr17 31375179 31375347 -54063133 + MER5A DNA MER1_type 7 186 -3 334 295 0 0 chr17 31375830 31375925 -54062555 + MIR SINE MIR 59 153 -109 218 315 81 30 chr17 31376092 31376289 -54062191 + L2 LINE L2 2906 3112 -160 490 290 86 41 chr17 31376733 31376954 -54061526 - MIR SINE MIR -12 250 20 45135 36 2 4 chr17 31377097 31383261 -54055219 - L1PA3 LINE L1 0 6155 1 303 254 59 51 chr17 31383265 31383383 -54055097 - L2 LINE L2 0 3313 3195 448 274 71 42 chr17 31385860 31386028 -54052452 + MIR SINE MIR 2 174 -88 679 229 51 62 chr17 31386972 31387247 -54051233 - L1ME3A LINE L1 -209 5961 5690 264 309 106 24 chr17 31387565 31387688 -54050792 + L2 LINE L2 3138 3270 -2 196 227 155 62 chr17 31388579 31388676 -54049804 - MIR SINE MIR -126 136 31 241 306 81 9 chr17 31388858 31388969 -54049511 - L2 LINE L2 -4 3309 3191 280 301 8 65 chr17 31389098 31389221 -54049259 + MIR3 SINE MIR 85 200 -8 525 167 0 0 chr17 31389683 31389833 -54048647 + (TA)n Simple_repeat Simple_repeat 1 150 0 471 302 88 0 chr17 31389925 31390130 -54048350 - MIR SINE MIR -6 256 34 186 313 0 45 chr17 31390152 31390219 -54048261 - L2 LINE L2 0 3313 3250 301 334 122 30 chr17 31390243 31390655 -54047825 - L2 LINE L2 -188 3084 2625 2400 65 23 10 chr17 31390655 31390961 -54047519 + AluY SINE Alu 1 310 -1 301 334 122 30 chr17 31390961 31391044 -54047436 - L2 LINE L2 -647 2625 2551 712 186 186 42 chr17 31391482 31391697 -54046783 + MLT1C LTR MaLR 1 246 -221 271 156 13 182 chr17 31391753 31391830 -54046650 + MER2 DNA MER2_type 281 344 -1 221 256 77 0 chr17 31391866 31391944 -54046536 - MIR SINE MIR -62 200 117 275 356 42 0 chr17 31392136 31392254 -54046226 - L2 LINE L2 -27 3245 3123 282 325 57 0 chr17 31392654 31392777 -54045703 + L2 LINE L2 3184 3313 0 916 117 11 22 chr17 31393176 31393356 -54045124 + (GAAA)n Simple_repeat Simple_repeat 2 179 0 635 154 18 30 chr17 31393500 31393669 -54044811 + GA-rich Low_complexity Low_complexity 4 170 0 1229 60 0 22 chr17 31393670 31393854 -54044626 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 612 202 43 53 chr17 31394944 31395132 -54043348 + MIR SINE MIR 49 234 -28 31 44 0 0 chr17 31395591 31395636 -54042844 + AT_rich Low_complexity Low_complexity 1 45 0 342 237 61 30 chr17 31395848 31395979 -54042501 - L1MC5 LINE L1 -44 7917 7783 2032 115 3 64 chr17 31396076 31396406 -54042074 + AluSx SINE Alu 1 310 -2 1345 230 57 54 chr17 31396458 31397214 -54041266 - L1ME2 LINE L1 -106 6148 5396 1520 191 10 31 chr17 31397214 31397502 -54040978 - AluJo SINE Alu -30 282 1 1345 230 57 54 chr17 31397502 31399666 -54038814 - L1ME2 LINE L1 -858 5396 3041 2853 248 93 93 chr17 31399709 31400548 -54037932 - L1MC4 LINE L1 -34 8008 7170 180 77 0 0 chr17 31400548 31400574 -54037906 + (TATG)n Simple_repeat Simple_repeat 1 26 0 205 71 0 48 chr17 31400577 31400619 -54037861 + (TCTA)n Simple_repeat Simple_repeat 4 43 0 2853 248 93 93 chr17 31400619 31401268 -54037212 - L1MC4 LINE L1 -874 7168 6520 1701 179 3 26 chr17 31401268 31401580 -54036900 + AluJb SINE Alu 1 305 -7 2853 248 93 93 chr17 31401580 31402354 -54036126 - L1MC4 LINE L1 -1522 6520 5658 1655 240 76 29 chr17 31402369 31403057 -54035423 - L1ME2 LINE L1 -3171 3044 2325 307 39 0 39 chr17 31403079 31403130 -54035350 + (TTTTA)n Simple_repeat Simple_repeat 1 49 0 289 234 43 21 chr17 31403150 31403244 -54035236 - L1ME2 LINE L1 -4011 2385 2290 517 294 50 68 chr17 31403258 31403656 -54034824 - L1ME3A LINE L1 -287 5883 5493 219 114 0 0 chr17 31403970 31404005 -54034475 + (TG)n Simple_repeat Simple_repeat 1 35 0 225 0 0 0 chr17 31404024 31404049 -54034431 + (AGATG)n Simple_repeat Simple_repeat 2 26 0 2194 110 0 7 chr17 31404990 31405281 -54033199 + AluSx SINE Alu 1 289 -23 304 133 13 13 chr17 31405311 31405386 -54033094 + (TTATA)n Simple_repeat Simple_repeat 5 79 0 287 348 93 0 chr17 31405396 31405557 -54032923 + L1ME4a LINE L1 5473 5648 -2160 220 336 96 0 chr17 31405659 31405763 -54032717 - MIR SINE MIR -129 133 20 427 308 44 8 chr17 31405784 31406034 -54032446 + L1ME4a LINE L1 5673 5931 -190 311 311 41 36 chr17 31406197 31406347 -54032133 + MIR SINE MIR 42 195 -67 1646 203 0 3 chr17 31407343 31407633 -54030847 + AluJo SINE Alu 17 305 -7 1763 177 23 0 chr17 31407644 31407949 -54030531 + AluJo SINE Alu 1 312 0 196 297 54 0 chr17 31407957 31408031 -54030449 - MIR SINE MIR -70 192 115 200 228 35 0 chr17 31408545 31408602 -54029878 + MIR SINE MIR 54 112 -150 410 299 133 90 chr17 31409360 31409858 -54028622 - L3 LINE CR1 -12 1565 1047 304 313 125 0 chr17 31410259 31410419 -54028061 + MIR SINE MIR 47 226 -36 223 329 59 26 chr17 31411395 31411547 -54026933 - L2 LINE L2 -219 3053 2897 513 321 26 42 chr17 31411651 31411916 -54026564 - L2 LINE L2 -693 2621 2361 769 308 13 4 chr17 31412133 31412360 -54026120 + MIR SINE MIR 8 236 -26 430 310 70 5 chr17 31413235 31413422 -54025058 + MIR SINE MIR 8 206 -56 357 43 0 0 chr17 31413655 31413702 -54024778 + (CA)n Simple_repeat Simple_repeat 2 48 0 511 216 0 0 chr17 31414129 31414217 -54024263 - 5S rRNA rRNA -32 89 2 621 135 36 0 chr17 31414469 31414580 -54023900 + MLT1C-int LTR MaLR 1243 1357 -14 1896 148 79 77 chr17 31414601 31414775 -54023705 + MLT1C LTR MaLR 1 173 -294 2402 102 0 3 chr17 31414775 31415088 -54023392 - AluSx SINE Alu 0 312 1 1896 148 79 77 chr17 31415088 31415379 -54023101 + MLT1C LTR MaLR 173 467 0 353 348 11 11 chr17 31415495 31415679 -54022801 + L2 LINE L2 2560 2743 -571 184 220 119 0 chr17 31416068 31416127 -54022353 + L2 LINE L2 3195 3260 -12 312 285 35 65 chr17 31416198 31416398 -54022082 - MIR SINE MIR -35 227 34 388 285 159 7 chr17 31417623 31417774 -54020706 + MIR SINE MIR 7 180 -82 384 266 12 77 chr17 31417778 31417848 -54020632 - MIR SINE MIR -6 256 183 1805 173 7 7 chr17 31417848 31418149 -54020331 + AluSx SINE Alu 1 301 -11 384 266 12 77 chr17 31418149 31418247 -54020233 - MIR SINE MIR -79 183 99 214 122 24 0 chr17 31418253 31418294 -54020186 + MIR SINE MIR 195 236 -26 1194 222 47 47 chr17 31418606 31418984 -54019496 - MLT1A2 LTR MaLR -16 374 3 637 274 23 0 chr17 31419486 31419661 -54018819 - LTR67 LTR ERVL -30 527 349 238 354 0 0 chr17 31419719 31419798 -54018682 - MIR SINE MIR -112 150 72 547 315 96 42 chr17 31419994 31420378 -54018102 + MLT1J2 LTR MaLR 45 449 -1 432 232 159 0 chr17 31420796 31420947 -54017533 - MER5A DNA MER1_type -6 183 9 307 176 33 121 chr17 31421955 31422046 -54016434 + MIR SINE MIR 42 124 -84 266 273 0 0 chr17 31422560 31422626 -54015854 + MIR SINE MIR 81 146 -116 448 286 20 20 chr17 31422871 31423018 -54015462 - MER5B DNA MER1_type -8 170 24 515 297 28 0 chr17 31423175 31423320 -54015160 - MIR SINE MIR -2 260 112 304 286 21 50 chr17 31423640 31423780 -54014700 - MER103 DNA DNA -28 138 3 298 253 84 12 chr17 31424516 31424599 -54013881 - L2 LINE L2 -11 3261 3173 333 284 64 50 chr17 31424725 31424866 -54013614 + L2 LINE L2 3125 3267 -5 284 370 9 9 chr17 31426138 31426246 -54012234 + MIR SINE MIR 29 136 -126 631 140 0 0 chr17 31426246 31426339 -54012141 - LTR12 LTR ERV1 -5 709 617 231 260 14 0 chr17 31426343 31426416 -54012064 - LTR30 LTR ERV1 -79 643 570 763 84 64 249 chr17 31426425 31426722 -54011758 - LTR12 LTR ERV1 -420 294 53 273 211 0 0 chr17 31426722 31426774 -54011706 - LTR30 LTR ERV1 -670 52 1 213 278 106 60 chr17 31427782 31427846 -54010634 - MIR SINE MIR -69 193 133 646 205 114 71 chr17 31427846 31428056 -54010424 + MER20 DNA MER1_type 1 219 0 213 278 106 60 chr17 31428056 31428140 -54010340 - MIR SINE MIR -129 133 35 848 155 93 12 chr17 31429490 31429651 -54008829 + MER5B DNA MER1_type 2 175 -3 26 0 0 0 chr17 31429821 31429847 -54008633 + AT_rich Low_complexity Low_complexity 1 26 0 5640 123 34 8 chr17 31429992 31430871 -54007609 + MER4D LTR ERV1 2 903 0 258 347 72 30 chr17 31430988 31431155 -54007325 + L2 LINE L2 2935 3108 -164 2259 159 8 6 chr17 31431666 31432024 -54006456 - MLT1A1 LTR MaLR 0 365 7 591 278 30 0 chr17 31432202 31432371 -54006109 + MIR SINE MIR 79 252 -10 508 231 82 36 chr17 31432926 31433121 -54005359 + L1MC5 LINE L1 7002 7205 -756 248 274 0 16 chr17 31433209 31433271 -54005209 + L1MD3 LINE L1 7426 7486 -509 394 306 6 6 chr17 31433310 31433467 -54005013 + L1MC5 LINE L1 7312 7468 -493 * 3045 257 132 60 chr17 31433457 31435374 -54003106 + L1MC4a LINE L1 5678 7639 -169 327 233 39 0 chr17 31435363 31435448 -54003032 + L1MC4 LINE L1 7904 7995 0 * 456 356 85 13 chr17 31435456 31435692 -54002788 + L2 LINE L2 3017 3269 -3 219 367 18 9 chr17 31435686 31435795 -54002685 - L3 LINE CR1 -127 1450 1341 * 359 315 0 16 chr17 31437217 31437344 -54001136 + MIR SINE MIR 18 142 -66 1045 218 166 3 chr17 31437359 31437648 -54000832 + MSTB2 LTR MaLR 1 336 -121 685 104 16 80 chr17 31437864 31438015 -54000465 + MSTB2 LTR MaLR 291 456 -1 701 313 23 19 chr17 31438059 31438315 -54000165 + MIR SINE MIR 6 262 0 510 275 132 21 chr17 31438615 31438804 -53999676 - MIR SINE MIR -46 216 7 774 301 103 58 chr17 31439449 31439894 -53998586 - L3 LINE CR1 -4 1573 1109 1174 219 52 60 chr17 31440423 31440792 -53997688 - LTR16A1 LTR ERVL -6 451 86 189 147 0 0 chr17 31441083 31441117 -53997363 + (TAAA)n Simple_repeat Simple_repeat 4 37 0 408 270 14 0 chr17 31441250 31441370 -53997110 - MIR3 SINE MIR -37 171 45 23 0 0 0 chr17 31443075 31443098 -53995382 + AT_rich Low_complexity Low_complexity 1 23 0 1396 150 0 0 chr17 31443143 31443369 -53995111 - AluJb SINE Alu 0 312 87 349 178 0 14 chr17 31443369 31443442 -53995038 + L1ME4a LINE L1 6045 6116 -5 202 269 39 19 chr17 31443622 31443674 -53994806 - L2 LINE L2 -34 3238 3186 5305 129 6 20 chr17 31443728 31444597 -53993883 + L1MA8 LINE L1 5435 6291 0 212 297 78 0 chr17 31444607 31444671 -53993809 + MIR3 SINE MIR 134 202 -6 2053 106 34 0 chr17 31444886 31445178 -53993302 + AluSg SINE Alu 6 307 -3 511 311 80 28 chr17 31445834 31446046 -53992434 - MIR SINE MIR -24 238 16 27 0 0 0 chr17 31446059 31446086 -53992394 + AT_rich Low_complexity Low_complexity 1 27 0 222 273 53 53 chr17 31446692 31446824 -53991656 - MIR SINE MIR -80 182 51 234 91 0 0 chr17 31449619 31449652 -53988828 + (CA)n Simple_repeat Simple_repeat 2 34 0 432 0 0 0 chr17 31451919 31451967 -53986513 + (TG)n Simple_repeat Simple_repeat 2 49 0 324 0 0 0 chr17 31452008 31452044 -53986436 + (TG)n Simple_repeat Simple_repeat 2 37 0 660 297 43 17 chr17 31452675 31452907 -53985573 - MIR SINE MIR -7 255 18 297 0 0 0 chr17 31452975 31453008 -53985472 + (CA)n Simple_repeat Simple_repeat 2 34 0 263 362 60 47 chr17 31453147 31453296 -53985184 - L2 LINE L2 0 3272 3122 482 306 13 13 chr17 31453656 31453813 -53984667 + MIR SINE MIR 80 236 -26 507 258 81 40 chr17 31454130 31454328 -53984152 - MIR SINE MIR -35 227 22 254 267 89 11 chr17 31455771 31455861 -53982619 - MER5A DNA MER1_type -21 168 72 484 296 193 44 chr17 31455930 31456292 -53982188 + L2 LINE L2 2897 3312 -1 1593 164 20 16 chr17 31456677 31456981 -53981499 - AluJo SINE Alu -7 305 1 206 211 18 18 chr17 31458257 31458314 -53980166 + A-rich Low_complexity Low_complexity 5 61 0 349 265 138 25 chr17 31458581 31458762 -53979718 - MIR3 SINE MIR -50 212 8 316 263 26 4 chr17 31459411 31459504 -53978976 - MIR SINE MIR -52 156 64 542 325 78 5 chr17 31459591 31459797 -53978683 + MIR SINE MIR 42 262 0 186 379 0 0 chr17 31460033 31460099 -53978381 - L2 LINE L2 -21 3251 3186 466 266 98 81 chr17 31460773 31460857 -53977623 - MIR SINE MIR -4 258 177 1418 155 5 14 chr17 31460857 31461076 -53977404 - MER20 DNA MER1_type -1 218 2 466 266 98 81 chr17 31461076 31461256 -53977224 - MIR SINE MIR -85 177 4 299 297 55 26 chr17 31461344 31461510 -53976970 - MIR SINE MIR -56 206 37 227 304 122 9 chr17 31462032 31462147 -53976333 - MIR SINE MIR -59 203 76 651 301 24 10 chr17 31462220 31462426 -53976054 + MIR SINE MIR 8 216 -46 189 94 0 0 chr17 31464022 31464054 -53974426 + (T)n Simple_repeat Simple_repeat 1 32 0 1784 160 3 3 chr17 31464660 31464948 -53973532 + AluJo SINE Alu 1 288 -24 27 29 0 0 chr17 31464950 31464984 -53973496 + AT_rich Low_complexity Low_complexity 1 34 0 1150 129 110 10 chr17 31465191 31465400 -53973080 + MER30 DNA MER1_type 1 230 0 216 0 0 0 chr17 31466044 31466068 -53972412 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 194 292 79 56 chr17 31466083 31466172 -53972308 - L2 LINE L2 -32 3240 3150 1960 175 92 157 chr17 31466352 31467125 -53971355 - LTR8A LTR ERV1 -4 723 1 405 223 27 115 chr17 31467700 31467848 -53970632 - L2 LINE L2 0 3313 3179 3516 146 25 31 chr17 31467967 31468571 -53969909 - LTR9 LTR ERV1 -12 600 1 414 261 17 34 chr17 31468573 31468692 -53969788 - MIR SINE MIR -133 129 13 754 269 42 14 chr17 31468945 31469161 -53969319 - MIR SINE MIR -2 260 39 1159 12 47 0 chr17 31469206 31469375 -53969105 + (TAGA)n Simple_repeat Simple_repeat 2 178 0 320 271 39 16 chr17 31469951 31470080 -53968400 + MER94 DNA DNA 2 133 -1 313 301 44 35 chr17 31470096 31470209 -53968271 - MIR SINE MIR -29 233 120 203 61 30 0 chr17 31472182 31472215 -53966265 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 332 321 82 30 chr17 31472515 31472649 -53965831 - MIR SINE MIR -114 148 8 189 0 0 0 chr17 31473027 31473048 -53965432 + (A)n Simple_repeat Simple_repeat 1 21 0 6169 164 36 27 chr17 31474100 31475740 -53962740 + L1MC1 LINE L1 4684 6333 0 251 172 0 17 chr17 31475751 31475809 -53962671 + GA-rich Low_complexity Low_complexity 2 58 0 337 301 82 36 chr17 31475835 31476054 -53962426 - MIR SINE MIR -14 248 20 280 328 141 8 chr17 31476186 31476314 -53962166 - MIR SINE MIR -117 145 1 306 260 21 52 chr17 31476360 31476456 -53962024 + MIR3 SINE MIR 97 189 -19 331 297 158 22 chr17 31476797 31477019 -53961461 + L2 LINE L2 2479 2730 -584 1910 45 0 0 chr17 31477019 31477239 -53961241 - AluY SINE Alu -13 298 79 2830 91 58 19 chr17 31477239 31477670 -53960810 + LTR7 LTR ERV1 1 448 -2 20256 101 58 29 chr17 31477672 31480872 -53957608 + HERVH LTR ERV1 1 3290 -4423 3377 118 6 2 chr17 31480862 31481362 -53957118 + HERVH LTR ERV1 3492 3993 -3720 * 4083 147 14 18 chr17 31481364 31482029 -53956451 + HERVH LTR ERV1 4488 5149 -2564 1325 130 33 9 chr17 31482030 31482245 -53956235 + HERVH LTR ERV1 5600 5819 -1894 * 2625 69 48 13 chr17 31482243 31482622 -53955858 + HERVH LTR ERV1 7322 7713 0 2603 91 91 21 chr17 31482622 31483041 -53955439 + LTR7 LTR ERV1 1 448 -2 636 98 0 0 chr17 31483043 31483125 -53955355 - AluY SINE Alu -227 83 2 2337 88 7 0 chr17 31483206 31483501 -53954979 + AluSc SINE Alu 1 297 -12 39 80 0 0 chr17 31484204 31484292 -53954188 + AT_rich Low_complexity Low_complexity 1 88 0 740 271 22 22 chr17 31484372 31484601 -53953879 + L1ME3A LINE L1 4588 4819 -1327 1711 154 0 77 chr17 31484601 31484925 -53953555 + AluJo SINE Alu 1 299 -13 740 271 22 22 chr17 31484925 31484972 -53953508 + L1ME3A LINE L1 4818 4864 -1282 464 229 71 14 chr17 31484956 31485096 -53953384 - L1ME3A LINE L1 -226 5944 5797 * 2834 244 57 44 chr17 31485121 31485229 -53953251 + L1ME3A LINE L1 4882 4987 -1183 1214 29 0 0 chr17 31485229 31485365 -53953115 + L1PA5 LINE L1 6014 6149 -5 2834 244 57 44 chr17 31485365 31486530 -53951950 + L1ME3A LINE L1 4987 6169 -1 315 259 0 0 chr17 31486572 31486657 -53951823 + L1ME4a LINE L1 4744 4828 -1318 2176 96 7 10 chr17 31486817 31487119 -53951361 + AluSx SINE Alu 1 301 -11 2127 119 3 0 chr17 31487229 31487531 -53950949 - AluSq SINE Alu -10 303 1 609 300 101 22 chr17 31487566 31488012 -53950468 + L1ME4a LINE L1 5293 5773 -348 267 170 149 32 chr17 31488378 31488472 -53950008 + L1ME4a LINE L1 5808 5912 -209 207 297 0 0 chr17 31489045 31489146 -53949334 + (TA)n Simple_repeat Simple_repeat 2 102 0 209 95 0 24 chr17 31489227 31489269 -53949211 + (TTTTTA)n Simple_repeat Simple_repeat 6 46 0 196 197 15 15 chr17 31489296 31489362 -53949118 + (TA)n Simple_repeat Simple_repeat 2 67 0 262 231 0 26 chr17 31489606 31489684 -53948796 - L1ME3 LINE L1 -4 6158 6083 422 179 0 0 chr17 31489766 31489844 -53948636 - L1MA10 LINE L1 -7 6327 6250 491 289 128 20 chr17 31489852 31490056 -53948424 + MIR SINE MIR 36 261 -1 230 356 10 29 chr17 31490026 31490130 -53948350 - MIR SINE MIR -84 178 77 * 233 286 40 53 chr17 31490316 31490448 -53948032 + MIR SINE MIR 70 198 -57 293 273 124 25 chr17 31490614 31490775 -53947705 - MIR SINE MIR -12 250 74 3728 250 70 15 chr17 31490813 31492136 -53946344 + L1ME2 LINE L1 3585 4979 -1167 1743 158 63 0 chr17 31492185 31492469 -53946011 + MER7A DNA MER2_type 45 344 -2 246 229 0 0 chr17 31492471 31492519 -53945961 + L1ME2 LINE L1 5028 5075 -1071 204 97 0 0 chr17 31492560 31492591 -53945889 + (GGAGA)n Simple_repeat Simple_repeat 4 34 0 766 130 11 33 chr17 31492605 31492789 -53945691 + GA-rich Low_complexity Low_complexity 1 180 0 263 274 0 16 chr17 31492790 31492852 -53945628 + polypurine Low_complexity Low_complexity 3 63 0 2877 227 67 46 chr17 31492852 31493889 -53944591 + L1ME2 LINE L1 5106 6164 0 472 254 60 90 chr17 31494610 31494706 -53943774 - MIR SINE MIR -13 249 152 284 0 0 27 chr17 31494706 31494743 -53943737 + (TTTA)n Simple_repeat Simple_repeat 3 38 0 894 201 13 0 chr17 31494746 31494895 -53943585 - AluJo SINE Alu -15 287 137 472 254 60 90 chr17 31494895 31495027 -53943453 - MIR SINE MIR -112 150 30 240 312 176 54 chr17 31495277 31495556 -53942924 - L2 LINE L2 -3 3269 2957 586 345 34 8 chr17 31495880 31496115 -53942365 - MIR SINE MIR -20 242 2 564 296 190 0 chr17 31497237 31497521 -53940959 - MLT1I LTR MaLR 0 409 72 319 326 11 0 chr17 31498054 31498143 -53940337 - MIR SINE MIR -112 150 61 308 284 135 7 chr17 31498184 31498325 -53940155 + MIR3 SINE MIR 20 178 -30 2198 118 3 3 chr17 31499908 31500212 -53938268 - AluSq SINE Alu -9 304 1 4200 190 38 16 chr17 31501080 31502502 -53935978 - L1MB7 LINE L1 -19 6663 5199 2284 108 0 10 chr17 31502502 31502816 -53935664 - AluY SINE Alu 0 311 1 4200 190 38 16 chr17 31502816 31502964 -53935516 - L1MB7 LINE L1 -1483 5199 5056 316 215 0 0 chr17 31502965 31503030 -53935450 - Ricksha DNA DNA -2346 900 836 2625 183 48 26 chr17 31503039 31503543 -53934937 - MLT2B3 LTR ERVL -39 515 1 982 192 68 4 chr17 31503544 31503778 -53934702 - L1MB7 LINE L1 -1582 5062 4814 41781 70 7 2 chr17 31503799 31509912 -53928568 - L1PA5 LINE L1 -2 6152 11 1177 174 17 131 chr17 31509924 31510014 -53928466 - L1MB7 LINE L1 -1816 4828 4729 884 140 7 37 chr17 31510014 31510150 -53928330 - AluJo SINE Alu -169 133 2 1177 174 17 131 chr17 31510150 31510409 -53928071 - L1MB7 LINE L1 -1915 4729 4519 957 246 9 23 chr17 31510403 31510745 -53927735 - L1MB7 LINE L1 -2770 3874 3538 * 2198 178 35 113 chr17 31510743 31510880 -53927600 - L1MB7 LINE L1 -5376 1166 1020 7320 66 9 0 chr17 31510880 31511845 -53926635 - L1PA7 LINE L1 -2 6152 5183 2198 178 35 113 chr17 31511845 31512157 -53926323 - L1MB7 LINE L1 -5522 1020 773 2063 118 3 33 chr17 31512157 31512461 -53926019 + AluSx SINE Alu 1 295 -17 2198 178 35 113 chr17 31512461 31512610 -53925870 - L1MB7 LINE L1 -5769 773 614 276 302 198 0 chr17 31513242 31513348 -53925132 - L3 LINE CR1 -72 1505 1379 293 348 81 0 chr17 31513355 31513516 -53924964 + MIR SINE MIR 8 181 -81 315 335 125 27 chr17 31513573 31514102 -53924378 - L3 LINE CR1 -187 1390 738 402 335 132 19 chr17 31514283 31514495 -53923985 - MIR SINE MIR -7 255 20 433 277 113 6 chr17 31514539 31514698 -53923782 - MER5A DNA MER1_type -1 188 13 472 320 34 11 chr17 31515440 31515618 -53922862 + MIR SINE MIR 81 262 0 423 299 162 0 chr17 31515635 31515789 -53922691 + MER5A DNA MER1_type 11 189 0 370 247 82 88 chr17 31516405 31516575 -53921905 + MIR SINE MIR 89 257 -5 456 295 33 0 chr17 31516594 31516716 -53921764 + L2 LINE L2 3188 3313 0 240 261 120 22 chr17 31517472 31517564 -53920916 - MER5A DNA MER1_type -80 109 9 249 184 61 0 chr17 31517727 31517776 -53920704 - MIR SINE MIR -56 152 101 830 306 92 22 chr17 31518171 31518583 -53919897 + MLT1J2 LTR MaLR 10 450 0 221 222 32 16 chr17 31518604 31518667 -53919813 + MER5A DNA MER1_type 115 178 -11 279 133 0 0 chr17 31519282 31519327 -53919153 + (CA)n Simple_repeat Simple_repeat 2 46 0 471 303 66 20 chr17 31520727 31520964 -53917516 + MIR SINE MIR 6 256 -6 1800 164 3 14 chr17 31521329 31521710 -53916770 - AluSx SINE Alu 0 379 2 3380 117 15 52 chr17 31521874 31522470 -53916010 + MER4B LTR ERV1 1 574 -36 5073 106 6 1 chr17 31522579 31523267 -53915213 + LTR8 LTR ERV1 1 691 0 950 112 13 26 chr17 31523576 31523728 -53914752 + LTR8A LTR ERV1 1 150 -577 5543 101 21 74 chr17 31523762 31524170 -53914310 + L1PA15 LINE L1 4256 4684 -1481 1928 146 42 0 chr17 31524170 31524457 -53914023 + AluSx SINE Alu 1 299 -13 5543 101 21 74 chr17 31524457 31525802 -53912678 + L1PA15 LINE L1 4684 5936 -229 1830 155 3 56 chr17 31525802 31526124 -53912356 + AluJo SINE Alu 6 310 -2 5543 101 21 74 chr17 31526124 31526341 -53912139 + L1PA15 LINE L1 5936 6163 -2 3233 145 116 64 chr17 31526478 31526978 -53911502 + LTR8A LTR ERV1 1 473 -254 1720 180 10 3 chr17 31526978 31527267 -53911213 + AluJb SINE Alu 2 292 -20 1198 84 6 6 chr17 31527271 31527449 -53911031 + (GAAA)n Simple_repeat Simple_repeat 1 178 0 3233 145 116 64 chr17 31527449 31527632 -53910848 + LTR8A LTR ERV1 475 725 -2 303 93 0 0 chr17 31528044 31528087 -53910393 + (CA)n Simple_repeat Simple_repeat 1 43 0 688 260 48 26 chr17 31528477 31528704 -53909776 - MIR SINE MIR 0 262 31 260 310 35 0 chr17 31529101 31529214 -53909266 + MIR SINE MIR 134 250 -12 409 198 22 11 chr17 31531035 31531126 -53907354 - MER113 DNA MER1_type? -73 448 357 180 97 0 0 chr17 31531141 31531172 -53907308 + (TCTG)n Simple_repeat Simple_repeat 2 32 0 458 251 42 12 chr17 31531262 31531429 -53907051 - MER113 DNA MER1_type? -326 195 24 374 278 65 29 chr17 31531978 31532147 -53906333 + MIR SINE MIR 19 194 -60 2182 96 20 3 chr17 31532219 31532511 -53905969 - AluSq SINE Alu -16 297 1 29 0 0 0 chr17 31532517 31532546 -53905934 + AT_rich Low_complexity Low_complexity 1 29 0 2880 191 6 32 chr17 31533374 31533440 -53905040 - MLT2B1 LTR ERVL 0 520 454 2091 128 10 0 chr17 31533440 31533913 -53904567 + AluSx SINE Alu 1 476 0 1288 45 11 6 chr17 31533737 31533937 -53904543 + (GAAA)n Simple_repeat Simple_repeat 2 202 0 2880 191 6 32 chr17 31533913 31534392 -53904088 - MLT2B1 LTR ERVL -66 454 10 236 329 86 7 chr17 31534664 31534804 -53903676 - L2 LINE L2 -558 2756 2606 217 295 50 50 chr17 31534896 31535035 -53903445 + L2 LINE L2 3175 3313 0 270 0 0 0 chr17 31535096 31535126 -53903354 + (TTA)n Simple_repeat Simple_repeat 1 30 0 355 254 27 18 chr17 31536199 31536309 -53902171 + MIR SINE MIR 36 146 -62 237 289 0 79 chr17 31536990 31537104 -53901376 + MIR SINE MIR 13 116 -92 184 265 0 0 chr17 31537521 31537570 -53900910 + L2 LINE L2 3265 3313 0 193 259 19 19 chr17 31538764 31538818 -53899662 - L2 LINE L2 -994 2320 2267 677 280 31 59 chr17 31538944 31539230 -53899250 - Charlie8 DNA MER1_type -2164 253 2 2154 142 0 0 chr17 31539261 31539570 -53898910 + AluSq SINE Alu 1 309 -4 270 307 60 37 chr17 31540974 31541167 -53897313 + MIR3 SINE MIR 7 197 -58 402 85 0 0 chr17 31542300 31542359 -53896121 + (CA)n Simple_repeat Simple_repeat 2 60 0 263 221 130 13 chr17 31542507 31542584 -53895896 - L2 LINE L2 -17 3296 3211 242 282 26 0 chr17 31543241 31543319 -53895161 - L2 LINE L2 -4 3309 3230 462 266 67 10 chr17 31543741 31543939 -53894541 - MIR SINE MIR -51 211 3 2287 118 0 0 chr17 31544167 31544473 -53894007 + AluSx SINE Alu 1 306 -6 194 196 130 0 chr17 31544482 31544528 -53893952 - MER5A DNA MER1_type -86 103 52 357 161 37 0 chr17 31544774 31544855 -53893625 + MER5A DNA MER1_type 28 111 -78 303 215 103 19 chr17 31545894 31546001 -53892479 + MIR3 SINE MIR 82 197 -11 526 245 61 0 chr17 31548570 31548717 -53889763 + MIR SINE MIR 87 242 -20 210 238 12 88 chr17 31552117 31552197 -53886283 - L2 LINE L2 -677 2637 2564 804 180 20 0 chr17 31553402 31553552 -53884928 - MLT1D-int LTR MaLR -1218 153 1 1914 194 63 73 chr17 31553552 31554015 -53884465 - MLT1D LTR MaLR 0 505 46 2278 107 30 0 chr17 31554015 31554314 -53884166 - AluSx SINE Alu -4 308 1 1914 194 63 73 chr17 31554314 31554340 -53884140 - MLT1D LTR MaLR -459 46 21 8844 201 35 30 chr17 31555668 31556557 -53881923 - L1MB2 LINE L1 -7 6164 5281 2022 144 3 3 chr17 31556557 31556856 -53881624 - AluSq SINE Alu -14 299 1 8844 201 35 30 chr17 31556856 31557074 -53881406 - L1MB2 LINE L1 -890 5281 5066 2124 139 3 0 chr17 31557074 31557368 -53881112 + AluSq SINE Alu 1 295 -18 8844 201 35 30 chr17 31557368 31557497 -53880983 - L1MB2 LINE L1 -1105 5066 4939 2421 65 7 0 chr17 31557497 31557790 -53880690 - AluSp SINE Alu -17 296 2 8844 201 35 30 chr17 31557790 31559774 -53878706 - L1MB2 LINE L1 -1232 4939 2922 600 198 0 0 chr17 31559750 31559856 -53878624 - L1MD3 LINE L1 -10 7985 7880 * 249 301 14 14 chr17 31559996 31560069 -53878411 - MLT1I LTR MaLR -242 167 95 414 283 57 28 chr17 31560370 31560547 -53877933 - MIR SINE MIR 0 262 81 236 289 74 52 chr17 31560762 31560897 -53877583 - MER117 DNA MER1_type -44 153 16 1792 155 30 0 chr17 31560947 31561244 -53877236 - L1MB1 LINE L1 -175 5993 5688 960 250 177 26 chr17 31561239 31562152 -53876328 + L1M4c LINE L1 1560 2634 -3748 * 22 0 0 0 chr17 31562168 31562190 -53876290 + AT_rich Low_complexity Low_complexity 1 22 0 200 111 67 44 chr17 31562606 31562651 -53875829 + A-rich Low_complexity Low_complexity 2 47 0 328 218 26 0 chr17 31563375 31563453 -53875027 + MLT1J2 LTR MaLR 10 89 -501 357 24 0 0 chr17 31563508 31563550 -53874930 + (CA)n Simple_repeat Simple_repeat 1 42 0 325 181 24 60 chr17 31563658 31563741 -53874739 + MLT1G1 LTR MaLR 516 595 0 188 276 95 35 chr17 31564519 31564635 -53873845 - MIR SINE MIR -67 141 19 24 32 0 0 chr17 31566004 31566035 -53872445 + AT_rich Low_complexity Low_complexity 1 31 0 2309 177 72 5 chr17 31566832 31567262 -53871218 - LTR24 LTR ERV1 -1 466 8 182 292 50 67 chr17 31567717 31567837 -53870643 - MER5A DNA MER1_type -24 165 48 490 277 236 34 chr17 31568038 31568330 -53870150 + MLT1J2 LTR MaLR 67 417 -33 689 78 0 10 chr17 31568864 31568966 -53869514 + (GGAGAA)n Simple_repeat Simple_repeat 2 102 0 1447 75 0 0 chr17 31569335 31569523 -53868957 - L1PA6 LINE L1 0 6154 5967 489 296 137 51 chr17 31569917 31570268 -53868212 + MLT1J2 LTR MaLR 67 447 -3 1659 168 21 7 chr17 31570373 31570664 -53867816 + AluJo SINE Alu 1 295 -17 33 25 0 0 chr17 31570664 31570704 -53867776 + AT_rich Low_complexity Low_complexity 1 40 0 295 289 86 8 chr17 31570768 31570896 -53867584 + MIR SINE MIR 93 230 -32 261 163 0 0 chr17 31571405 31571454 -53867026 + T-rich Low_complexity Low_complexity 1 49 0 30354 108 12 13 chr17 31571456 31577234 -53861246 + L1PA7 LINE L1 680 6469 0 2061 149 0 3 chr17 31577913 31578215 -53860265 - AluSx SINE Alu -11 301 1 546 330 55 0 chr17 31578234 31578452 -53860028 - MIR SINE MIR 0 262 33 308 206 111 56 chr17 31578618 31578744 -53859736 - MER117 DNA MER1_type -42 155 23 655 309 42 58 chr17 31580474 31580856 -53857624 - MLT1I LTR MaLR -33 376 1 39 0 0 0 chr17 31581847 31581886 -53856594 + AT_rich Low_complexity Low_complexity 1 39 0 489 292 0 22 chr17 31582865 31583002 -53855478 + MER94 DNA DNA 1 134 0 737 293 70 29 chr17 31584587 31584901 -53853579 - LTR16A LTR ERVL -107 343 17 1310 350 33 31 chr17 31585057 31586172 -53852308 - MERVL LTR ERVL -161 5324 4201 43474 33 23 1 chr17 31586499 31592501 -53845979 - L1PA2 LINE L1 0 6155 22 951 319 67 50 chr17 31592502 31593288 -53845192 - MERVL LTR ERVL -1813 3841 3042 578 247 17 56 chr17 31593435 31593613 -53844867 - LTR16A LTR ERVL -176 274 104 244 268 32 70 chr17 31593866 31593986 -53844494 - MER5A DNA MER1_type -3 175 62 312 297 70 8 chr17 31594169 31594297 -53844183 + MIR SINE MIR 92 227 -35 260 244 37 12 chr17 31595451 31595533 -53842947 - MIR SINE MIR -15 247 164 1650 186 7 0 chr17 31597558 31597833 -53840647 + AluJb SINE Alu 1 277 -35 1989 216 52 25 chr17 31597834 31598315 -53840165 - MER9 LTR ERVK 0 511 18 224 274 23 11 chr17 31599668 31599785 -53838695 + MIR SINE MIR 33 150 -62 317 293 33 40 chr17 31600557 31600707 -53837773 - MER5A DNA MER1_type -3 186 38 309 224 190 9 chr17 31601829 31601945 -53836535 - MIR SINE MIR -118 144 8 26 0 0 0 chr17 31602767 31602793 -53835687 + AT_rich Low_complexity Low_complexity 1 26 0 525 225 130 10 chr17 31602927 31603127 -53835353 - L1ME3 LINE L1 -1 6161 5938 1541 282 81 27 chr17 31603179 31603697 -53834783 - MLT1E2 LTR MaLR 0 626 81 239 170 43 0 chr17 31603881 31603928 -53834552 - MLT1E2 LTR MaLR -559 67 19 2063 114 29 0 chr17 31603935 31604215 -53834265 - AluSx SINE Alu -24 288 1 31 44 0 0 chr17 31604360 31604405 -53834075 + AT_rich Low_complexity Low_complexity 1 45 0 316 298 51 19 chr17 31604405 31604620 -53833860 + L1ME4a LINE L1 5742 5963 -158 204 241 0 0 chr17 31604621 31604679 -53833801 + (TA)n Simple_repeat Simple_repeat 1 58 0 584 225 27 0 chr17 31604764 31604875 -53833605 + MER81 DNA DNA 1 114 0 841 120 0 0 chr17 31605269 31605386 -53833094 + FLAM_C SINE Alu 5 121 -12 836 273 45 4 chr17 31606346 31606588 -53831892 + MLT1I LTR MaLR 3 254 -155 360 279 18 9 chr17 31607572 31607683 -53830797 + MIR3 SINE MIR 49 160 -48 207 360 93 7 chr17 31607984 31608123 -53830357 + MIR3 SINE MIR 56 206 -2 405 288 62 23 chr17 31609234 31609411 -53829069 - MER117 DNA MER1_type -11 186 3 308 336 32 24 chr17 31609418 31609543 -53828937 - MIR3 SINE MIR -53 155 30 471 222 104 52 chr17 31610114 31610326 -53828154 - L1ME3 LINE L1 -3 6159 5937 401 130 29 0 chr17 31610746 31610815 -53827665 + LTR56 LTR ERV1 197 267 -178 367 109 18 0 chr17 31810819 31810874 -53627606 - AluJ/FLAM SINE Alu -245 57 2 323 235 73 59 chr17 31810881 31811017 -53627463 - L1ME3A LINE L1 0 6170 6033 2002 106 14 0 chr17 31811113 31811406 -53627074 + AluSx SINE Alu 1 297 -15 2216 102 0 3 chr17 31811411 31811716 -53626764 + AluSx SINE Alu 1 304 -8 632 177 0 65 chr17 31811758 31811882 -53626598 - FLAM_A SINE Alu -13 129 14 1579 174 13 10 chr17 31811901 31812205 -53626275 - AluJo SINE Alu -7 305 1 1154 261 90 8 chr17 31812238 31812594 -53625886 - L1ME3A LINE L1 -287 5883 5499 2048 136 0 0 chr17 31812809 31813118 -53625362 - AluSq SINE Alu -4 309 1 926 121 0 0 chr17 31813124 31813264 -53625216 - AluSg/x SINE Alu -9 303 164 1944 121 4 7 chr17 31813329 31813630 -53624850 - AluSx SINE Alu 0 301 2 615 267 32 73 chr17 31813729 31813976 -53624504 - MIR SINE MIR -6 256 20 201 178 0 0 chr17 31814151 31814196 -53624284 + T-rich Low_complexity Low_complexity 1 45 0 1944 138 0 0 chr17 31814320 31814611 -53623869 - AluSx SINE Alu -21 291 1 2240 95 0 0 chr17 31814650 31814945 -53623535 + AluSg SINE Alu 1 295 -15 1750 137 50 0 chr17 31816158 31816436 -53622044 + AluSx SINE Alu 1 292 -20 379 98 0 0 chr17 31816804 31816865 -53621615 - Alu SINE Alu 0 301 241 1017 126 0 0 chr17 31816967 31817118 -53621362 + AluSg/x SINE Alu 158 308 -2 1698 118 99 0 chr17 31817486 31817758 -53620722 - AluSx SINE Alu -13 299 1 201 346 52 47 chr17 31817906 31818117 -53620363 - MIR SINE MIR -48 214 3 2269 90 3 6 chr17 31818147 31818458 -53620022 - AluSq SINE Alu -3 310 1 472 333 13 0 chr17 31819900 31820053 -53618427 + MIR SINE MIR 51 205 -57 2020 104 7 3 chr17 31820072 31820360 -53618120 - AluSg SINE Alu -21 289 1 929 162 0 0 chr17 31820510 31820664 -53617816 - FRAM SINE Alu -14 162 9 2188 106 0 3 chr17 31820670 31820972 -53617508 - AluSc SINE Alu -8 301 1 356 278 56 28 chr17 31820983 31821127 -53617353 - L1MCa LINE L1 -4361 2065 1918 * 427 246 8 54 chr17 31821048 31821178 -53617302 + L1MCa LINE L1 1941 2064 -4362 694 147 0 59 chr17 31821181 31821317 -53617163 - FLAM_C SINE Alu -5 128 1 2111 107 33 0 chr17 31821606 31821906 -53616574 - AluSx SINE Alu -2 310 1 470 304 164 0 chr17 31822248 31822462 -53616018 - MIR SINE MIR -12 250 2 1338 188 7 18 chr17 31823164 31823440 -53615040 - AluJb SINE Alu -39 273 1 2100 123 3 0 chr17 31823575 31823876 -53614604 + AluSx SINE Alu 1 302 -10 2048 122 0 0 chr17 31823903 31824191 -53614289 + AluSg SINE Alu 1 288 -22 1890 149 13 0 chr17 31824204 31824506 -53613974 + AluJb SINE Alu 1 306 -6 2004 131 0 0 chr17 31824713 31825011 -53613469 - AluSx SINE Alu -14 298 1 22 0 0 0 chr17 31825020 31825042 -53613438 + AT_rich Low_complexity Low_complexity 1 22 0 2026 135 0 3 chr17 31825835 31826131 -53612349 - AluSx SINE Alu -17 295 1 608 253 69 6 chr17 31826137 31826311 -53612169 - L2 LINE L2 -607 2707 2523 313 223 9 107 chr17 31826716 31826828 -53611652 + MIR SINE MIR 88 188 -74 1280 84 0 0 chr17 31827170 31827337 -53611143 - AluSg SINE Alu -143 167 1 1728 138 17 27 chr17 31827470 31827766 -53610714 + AluSx SINE Alu 1 293 -19 1132 127 0 0 chr17 31828270 31828436 -53610044 - AluSg/x SINE Alu -16 296 131 195 42 0 0 chr17 31828436 31828460 -53610020 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2151 96 0 0 chr17 31828460 31828740 -53609740 - AluSc SINE Alu -28 281 2 244 261 0 29 chr17 31828948 31829017 -53609463 + GA-rich Low_complexity Low_complexity 2 68 0 381 250 183 8 chr17 31829050 31829170 -53609310 + L1MC4a LINE L1 5504 5644 -2164 632 184 7 174 chr17 31829293 31829394 -53609086 + L1MC4a LINE L1 5681 5797 -2011 2382 73 0 0 chr17 31829394 31829694 -53608786 + AluY SINE Alu 1 300 -11 632 184 7 174 chr17 31829694 31829835 -53608645 + L1MC4a LINE L1 5797 5870 -1938 1920 142 0 0 chr17 31829835 31830174 -53608306 + AluSx SINE Alu 1 339 0 632 184 7 174 chr17 31830174 31830222 -53608258 + L1MC4a LINE L1 5870 5924 -1884 331 224 56 93 chr17 31830260 31830421 -53608059 + HAL1 LINE L1 2353 2507 0 2014 125 7 0 chr17 31830425 31830730 -53607750 + AluSx SINE Alu 1 307 -5 266 200 21 14 chr17 31830778 31830859 -53607621 - MIR3 SINE MIR -7 201 89 7493 18 0 0 chr17 31830882 31831727 -53606753 - L1PA3 LINE L1 0 6155 5311 916 26 0 8 chr17 31831722 31831839 -53606641 + L1PA3 LINE L1 5214 5329 -817 * 1774 147 3 34 chr17 31832221 31832541 -53605939 - AluJo SINE Alu -2 310 1 313 119 0 0 chr17 31832549 31832591 -53605889 - AluSp/q SINE Alu -30 273 232 1972 129 0 0 chr17 31832611 31832890 -53605590 - AluSq SINE Alu -34 279 1 1979 117 0 3 chr17 31833615 31833944 -53604536 - AluSx SINE Alu 0 328 1 2050 131 3 6 chr17 31834335 31834648 -53603832 - AluSx SINE Alu 0 312 1 201 394 32 21 chr17 31834956 31835050 -53603430 + L3b LINE CR1 1442 1536 -47 456 283 77 73 chr17 31835680 31835824 -53602656 + MIR3 SINE MIR 15 157 -104 2184 92 0 3 chr17 31835824 31836116 -53602364 - AluY SINE Alu -20 291 1 2001 117 7 0 chr17 31836116 31836407 -53602073 - AluSx SINE Alu -19 293 1 456 283 77 73 chr17 31836407 31836466 -53602014 + MIR3 SINE MIR 156 219 -42 2480 74 0 0 chr17 31836734 31837045 -53601435 + AluSp SINE Alu 1 311 -2 800 176 0 0 chr17 31837117 31837242 -53601238 - FLAM_C SINE Alu -16 127 3 245 250 0 44 chr17 31837244 31837312 -53601168 - L2 LINE L2 -1519 1795 1731 1778 159 7 0 chr17 31837775 31838064 -53600416 + AluSx SINE Alu 1 291 -21 2052 97 7 27 chr17 31838142 31838442 -53600038 + AluSg SINE Alu 1 294 -16 526 303 74 6 chr17 31838688 31838863 -53599617 + MIR3 SINE MIR 5 191 -17 2462 60 0 0 chr17 31838888 31839187 -53599293 - AluY SINE Alu -12 299 1 25 0 0 0 chr17 31839241 31839266 -53599214 + AT_rich Low_complexity Low_complexity 1 25 0 610 187 9 0 chr17 31839266 31839373 -53599107 - FLAM_C SINE Alu -25 118 11 2130 112 0 3 chr17 31839389 31839702 -53598778 - AluSx SINE Alu 0 312 1 252 0 0 0 chr17 31839707 31839735 -53598745 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 1315 139 0 51 chr17 31839741 31839978 -53598502 - AluSx SINE Alu -24 288 64 180 111 0 0 chr17 31840081 31840108 -53598372 + (A)n Simple_repeat Simple_repeat 1 27 0 657 148 19 0 chr17 31840109 31840217 -53598263 + AluJo SINE Alu 120 229 -83 193 225 0 157 chr17 31840242 31840280 -53598200 - MER5A DNA MER1_type -108 81 63 2328 59 3 16 chr17 31840280 31840586 -53597894 - AluY SINE Alu -8 303 2 193 225 0 157 chr17 31840586 31840636 -53597844 - MER5A DNA MER1_type -126 63 7 185 269 39 0 chr17 31840822 31840874 -53597606 + L2 LINE L2 3169 3222 -91 2219 133 62 3 chr17 31841010 31841378 -53597102 - MLT1B LTR MaLR 0 390 1 2114 96 7 3 chr17 31841946 31842238 -53596242 + AluSc SINE Alu 6 298 -11 823 172 6 58 chr17 31842592 31842766 -53595714 - FAM SINE Alu -10 165 1 24 0 0 0 chr17 31843834 31843858 -53594622 + GC_rich Low_complexity Low_complexity 1 24 0 22 35 0 0 chr17 31843961 31843990 -53594490 + GC_rich Low_complexity Low_complexity 1 29 0 2184 109 0 0 chr17 31845740 31846052 -53592428 - AluSx SINE Alu 0 312 1 2188 87 3 0 chr17 31846586 31846872 -53591608 + AluY SINE Alu 2 288 -23 1876 123 13 7 chr17 31847074 31847374 -53591106 - AluSx SINE Alu -10 302 1 2112 92 3 7 chr17 31847379 31847686 -53590794 - AluSp SINE Alu 0 306 1 2061 118 0 0 chr17 31847687 31847984 -53590496 - AluSg SINE Alu -13 297 1 2028 121 13 0 chr17 31847990 31848295 -53590185 - AluSx SINE Alu -3 309 1 1356 188 16 36 chr17 31848309 31848617 -53589863 - AluJo SINE Alu -10 302 1 1703 191 0 0 chr17 31849139 31849433 -53589047 - AluJo SINE Alu -17 295 2 2200 101 10 0 chr17 31849594 31849901 -53588579 - AluSx SINE Alu -2 310 1 237 344 214 16 chr17 31850160 31850352 -53588128 - L3 LINE CR1 -9 1568 1339 1457 166 7 62 chr17 31850511 31850819 -53587661 - AluJb SINE Alu -9 303 13 2190 76 41 0 chr17 31851042 31851332 -53587148 + AluY SINE Alu 1 302 -9 736 162 0 8 chr17 31851408 31851525 -53586955 + FLAM_C SINE Alu 2 117 -26 2035 115 3 13 chr17 31851766 31852079 -53586401 - AluSx SINE Alu -2 310 1 1849 122 7 24 chr17 31852088 31852408 -53586072 - AluSx SINE Alu 0 315 1 1886 102 4 0 chr17 31852447 31852701 -53585779 - AluSp SINE Alu -58 255 1 1042 180 0 0 chr17 31852710 31852893 -53585587 - AluJb SINE Alu -1 311 129 1562 167 26 29 chr17 31852899 31853211 -53585269 - AluJo SINE Alu -1 311 1 416 241 31 0 chr17 31853250 31853372 -53585108 - L1MC4 LINE L1 -447 7408 7202 357 155 18 5 chr17 31853372 31853449 -53585031 + Alu SINE Alu 1 50 -249 1862 157 0 0 chr17 31853549 31853842 -53584638 - AluSx SINE Alu -18 294 2 1656 204 138 67 chr17 31853842 31854450 -53584030 - MER20B DNA MER1_type -109 674 24 256 321 0 9 chr17 31854467 31854576 -53583904 + L1MC/D LINE L1 5775 5882 -1926 254 111 0 0 chr17 31854597 31854642 -53583838 - AluSp/q SINE Alu 0 303 259 1033 142 29 29 chr17 31854742 31854946 -53583534 + AluJb SINE Alu 108 311 -1 1525 154 4 36 chr17 31854946 31855226 -53583254 + AluJo SINE Alu 22 292 -20 339 190 17 0 chr17 31855897 31855955 -53582525 - AluJ/FLAM SINE Alu -237 65 7 2138 127 0 0 chr17 31856383 31856690 -53581790 + AluSq SINE Alu 6 312 -1 674 158 0 0 chr17 31856796 31856897 -53581583 - FLAM_C SINE Alu -36 107 7 1521 175 0 55 chr17 31857209 31857518 -53580962 + AluJb SINE Alu 1 292 -20 243 161 13 161 chr17 31857543 31857610 -53580870 - L1MC4 LINE L1 0 8042 7967 2003 131 0 16 chr17 31857610 31857785 -53580695 - AluSx SINE Alu -4 308 139 2237 97 0 0 chr17 31857785 31858083 -53580397 - AluSg SINE Alu -12 298 1 2003 131 0 16 chr17 31858083 31858220 -53580260 - AluSx SINE Alu -173 139 1 1634 152 22 0 chr17 31858221 31858534 -53579946 - AluSx SINE Alu 0 319 1 243 161 13 161 chr17 31858534 31858612 -53579868 - L1MC4 LINE L1 -74 7968 7916 2179 97 13 0 chr17 31858828 31859128 -53579352 + AluSg SINE Alu 1 304 -6 872 186 11 34 chr17 31860332 31860509 -53577971 - AluJo SINE Alu -138 174 2 2319 89 20 0 chr17 31862657 31862961 -53575519 + AluSg SINE Alu 1 310 0 2493 74 0 10 chr17 31863175 31863487 -53574993 + AluSq SINE Alu 1 309 -4 2244 103 3 0 chr17 31864836 31865126 -53573354 - AluSx SINE Alu -21 291 1 1742 110 13 0 chr17 31865249 31865486 -53572994 - AluSq SINE Alu -14 299 60 1376 113 80 0 chr17 31865810 31866023 -53572457 - MER30 DNA MER1_type 0 230 1 211 322 110 0 chr17 31866025 31866143 -53572337 + MIR SINE MIR 91 221 -41 1481 131 0 9 chr17 31866168 31866382 -53572098 + AluJo SINE Alu 87 298 -14 791 228 145 4 chr17 31866403 31866631 -53571849 + MIR SINE MIR 3 262 0 2605 53 0 3 chr17 31866681 31866983 -53571497 + AluY SINE Alu 1 301 -10 692 208 57 13 chr17 31868589 31868748 -53569732 + FRAM SINE Alu 1 166 0 2162 101 0 17 chr17 31869051 31869370 -53569110 - AluSg SINE Alu 0 314 1 304 244 17 50 chr17 31869383 31869502 -53568978 - MER5A DNA MER1_type -9 180 66 213 175 0 0 chr17 31869849 31869889 -53568591 + L2 LINE L2 3274 3313 0 1821 135 103 19 chr17 31870371 31870682 -53567798 + MER1B DNA MER1_type 1 337 0 735 218 0 0 chr17 31870735 31870868 -53567612 - FLAM_A SINE Alu 0 133 1 2066 132 10 6 chr17 31871172 31871483 -53566997 + AluSx SINE Alu 1 312 0 739 176 0 0 chr17 31871505 31871624 -53566856 + FLAM_C SINE Alu 3 121 -12 1870 135 21 4 chr17 31871792 31872073 -53566407 + AluSx SINE Alu 10 295 -17 2286 97 0 29 chr17 31873162 31873471 -53565009 + AluSx SINE Alu 1 300 -12 2386 89 0 3 chr17 31875111 31875413 -53563067 - AluSx SINE Alu -11 301 1 1890 139 3 10 chr17 31875414 31875708 -53562772 - AluSx SINE Alu -16 296 5 401 157 24 0 chr17 31875778 31875861 -53562619 + AluJ/FRAM SINE Alu 228 312 0 1535 167 51 31 chr17 31877246 31877382 -53561098 + AluJb SINE Alu 2 134 -178 1969 86 75 14 chr17 31877382 31877661 -53560819 + AluSp SINE Alu 1 296 -17 1535 167 51 31 chr17 31877661 31877818 -53560662 + AluJb SINE Alu 134 301 -11 1207 133 67 0 chr17 31877859 31878054 -53560426 - MER3 DNA MER1_type -1 208 1 32 111 0 0 chr17 31879773 31879917 -53558563 + GC_rich Low_complexity Low_complexity 1 144 0 28 48 0 0 chr17 31880227 31880269 -53558211 + GC_rich Low_complexity Low_complexity 1 42 0 1776 113 8 0 chr17 31881243 31881482 -53556998 + AluSq SINE Alu 60 300 -13 321 296 92 83 chr17 31883030 31883184 -53555296 - MARNA DNA Mariner -173 413 262 2061 105 45 0 chr17 31883184 31883470 -53555010 + AluSx SINE Alu 1 299 -13 2248 111 0 19 chr17 31883472 31883788 -53554692 + AluSg SINE Alu 1 310 0 321 296 92 83 chr17 31883788 31883978 -53554502 - MARNA DNA Mariner -324 262 63 276 333 102 0 chr17 31883861 31884008 -53554472 + MARNA DNA Mariner 394 555 -31 * 248 183 100 0 chr17 31884008 31884068 -53554412 + MIR SINE MIR 197 262 0 1046 157 0 0 chr17 31884704 31884857 -53553623 - AluJb SINE Alu -25 287 135 2301 99 0 0 chr17 31885675 31885969 -53552511 + AluSx SINE Alu 1 294 -18 2279 108 7 0 chr17 31886235 31886540 -53551940 + AluSx SINE Alu 1 307 -5 1787 64 5 0 chr17 31888393 31888611 -53549869 - AluSp SINE Alu -16 297 79 319 328 113 38 chr17 31888826 31888945 -53549535 - MIR SINE MIR -6 256 147 873 143 0 0 chr17 31888945 31889078 -53549402 + FLAM_C SINE Alu 1 133 0 319 328 113 38 chr17 31889078 31889196 -53549284 - MIR SINE MIR -115 147 1 403 310 76 0 chr17 31889231 31889376 -53549104 + MIR SINE MIR 105 260 -2 2061 145 0 0 chr17 31889516 31889812 -53548668 - AluSx SINE Alu -16 296 1 2143 108 17 7 chr17 31890441 31890737 -53547743 - AluSx SINE Alu -12 300 2 2024 148 3 0 chr17 31891183 31891473 -53547007 - AluJb SINE Alu -21 291 1 968 154 18 72 chr17 31891596 31891817 -53546663 + L1MC5 LINE L1 7702 7910 -51 2271 102 0 3 chr17 31892452 31892747 -53545733 - AluSx SINE Alu -18 294 1 2192 102 10 7 chr17 31892758 31893053 -53545427 - AluSx SINE Alu -16 296 1 984 58 0 43 chr17 31893622 31893761 -53544719 - AluSg/x SINE Alu 0 310 178 1094 127 0 66 chr17 31893877 31894058 -53544422 + FRAM SINE Alu 1 162 -14 2073 153 0 0 chr17 31894058 31894366 -53544114 + AluSx SINE Alu 1 308 -4 217 309 0 0 chr17 31894535 31894603 -53543877 - MIR SINE MIR -109 153 86 1803 163 3 3 chr17 31894666 31894948 -53543532 + AluJb SINE Alu 1 282 -30 351 60 0 0 chr17 31894951 31895001 -53543479 + (CA)n Simple_repeat Simple_repeat 1 50 0 186 83 21 42 chr17 31895129 31895177 -53543303 + (TA)n Simple_repeat Simple_repeat 1 47 0 2746 76 3 0 chr17 31895361 31895716 -53542764 + L1PA13 LINE L1 5805 6160 -3 2100 119 10 3 chr17 31895843 31896136 -53542344 + AluSx SINE Alu 1 295 -17 2100 153 0 0 chr17 31896144 31896451 -53542029 + AluSx SINE Alu 1 307 -5 669 168 48 24 chr17 31896937 31897062 -53541418 - FLAM_C SINE Alu -1 132 5 1898 149 24 0 chr17 31897103 31897398 -53541082 + AluSx SINE Alu 1 302 -10 23 33 0 0 chr17 31897916 31897946 -53540534 + AT_rich Low_complexity Low_complexity 1 30 0 880 139 0 0 chr17 31897948 31898077 -53540403 - FLAM_C SINE Alu -4 129 1 2237 119 0 0 chr17 31898992 31899295 -53539185 + AluSx SINE Alu 1 303 -9 333 296 46 9 chr17 31899664 31899772 -53538708 + L2 LINE L2 3188 3299 -14 650 237 8 0 chr17 31900139 31900270 -53538210 + FLAM_A SINE Alu 1 132 -1 1820 150 0 68 chr17 31900279 31900605 -53537875 - AluJo SINE Alu -8 304 1 794 255 82 5 chr17 31900747 31900955 -53537525 + MER58A DNA MER1_type 1 224 0 2297 115 0 0 chr17 31901006 31901302 -53537178 + AluSq SINE Alu 1 296 -17 577 193 24 121 chr17 31901526 31901596 -53536884 + MLT1G1 LTR MaLR 5 51 -544 1839 168 0 3 chr17 31901596 31901894 -53536586 - AluJb SINE Alu -13 299 3 577 193 24 121 chr17 31901894 31901989 -53536491 + MLT1G1 LTR MaLR 51 154 -441 824 197 33 11 chr17 31901989 31902172 -53536308 + AluJo SINE Alu 120 306 -6 1242 226 134 50 chr17 31902172 31902553 -53535927 + MLT1G3 LTR MaLR 85 497 -33 1590 197 3 10 chr17 31902555 31902849 -53535631 + AluJo SINE Alu 1 292 -20 2220 100 14 3 chr17 31903222 31903511 -53534969 + AluSq SINE Alu 1 292 -21 361 215 201 14 chr17 31903597 31903741 -53534739 + MER5A DNA MER1_type 13 183 -6 2270 87 3 3 chr17 31905209 31905521 -53532959 + AluSq SINE Alu 1 312 0 999 144 6 33 chr17 31905535 31905716 -53532764 + FRAM SINE Alu 1 176 0 630 108 0 21 chr17 31905727 31905820 -53532660 + THE1C LTR MaLR 1 91 -284 2511 81 0 0 chr17 31906232 31906541 -53531939 + AluSc SINE Alu 1 309 0 219 36 0 0 chr17 31906710 31906738 -53531742 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 203 255 0 0 chr17 31907556 31907603 -53530877 + CT-rich Low_complexity Low_complexity 1 47 0 627 200 16 0 chr17 31907699 31907824 -53530656 + FLAM_A SINE Alu 11 137 -5 2608 57 0 0 chr17 31907905 31908203 -53530277 + AluY SINE Alu 1 298 -13 342 181 37 0 chr17 31908749 31908828 -53529652 + L1ME3A LINE L1 5532 5615 -555 446 248 135 0 chr17 31908833 31908935 -53529545 + L1ME3A LINE L1 5705 5832 -338 965 87 0 36 chr17 31908935 31909073 -53529407 + FLAM_C SINE Alu 1 133 0 446 248 135 0 chr17 31909073 31909111 -53529369 + L1ME3A LINE L1 5832 5864 -306 309 109 0 0 chr17 31909159 31909205 -53529275 + (CA)n Simple_repeat Simple_repeat 2 47 0 184 314 85 51 chr17 31909575 31909693 -53528787 + L2 LINE L2 3147 3268 -4 1979 78 4 4 chr17 31911125 31911370 -53527110 - AluSp SINE Alu -68 245 1 1929 130 3 59 chr17 31911371 31911693 -53526787 - AluSx SINE Alu -8 304 1 781 227 16 0 chr17 31911848 31912033 -53526447 - MIR SINE MIR 0 262 75 425 259 30 8 chr17 31912033 31912164 -53526316 - MER104 DNA Tc2 0 180 47 1534 181 0 32 chr17 31912165 31912447 -53526033 - AluJo SINE Alu -15 297 25 21 36 0 0 chr17 31912467 31912495 -53525985 + AT_rich Low_complexity Low_complexity 1 28 0 883 179 6 13 chr17 31912498 31912654 -53525826 - FRAM SINE Alu -21 155 1 238 159 0 0 chr17 31912661 31912705 -53525775 - HsTC2 DNA Tc2 -1854 44 1 2144 113 17 3 chr17 31912904 31913204 -53525276 + AluSg SINE Alu 3 306 -4 984 170 0 0 chr17 31913217 31913370 -53525110 + FRAM SINE Alu 5 157 -19 2113 132 0 10 chr17 31914212 31914508 -53523972 + AluSx SINE Alu 1 293 -19 1465 212 62 44 chr17 31914662 31915067 -53523413 - MLT1E2 LTR MaLR -8 618 207 981 164 20 0 chr17 31915112 31915264 -53523216 - AluJb SINE Alu -27 285 131 2557 84 0 0 chr17 31915280 31915590 -53522890 + AluY SINE Alu 1 310 -1 681 145 0 60 chr17 31915638 31915755 -53522725 - FLAM_C SINE Alu -32 111 2 586 209 7 68 chr17 31915769 31915917 -53522563 - MLT1E2 LTR MaLR -424 200 62 29 28 0 0 chr17 31915944 31915980 -53522500 + AT_rich Low_complexity Low_complexity 1 36 0 819 144 0 0 chr17 31915980 31916098 -53522382 - AluJb SINE Alu -194 118 1 202 325 44 26 chr17 31917101 31917215 -53521265 - MER5B DNA MER1_type 0 178 63 565 207 44 7 chr17 31917702 31917837 -53520643 - MLT1H1 LTR MaLR 0 555 416 504 250 6 30 chr17 31917999 31918078 -53520402 - L1MC5 LINE L1 -85 7876 7797 2135 122 30 0 chr17 31918078 31918381 -53520099 - AluSx SINE Alu 0 312 1 504 250 6 30 chr17 31918381 31918465 -53520015 - L1MC5 LINE L1 -164 7797 7717 2401 197 20 61 chr17 31918541 31918671 -53519809 - L1ME2 LINE L1 -173 5991 5857 2171 107 10 13 chr17 31918671 31918981 -53519499 - AluSx SINE Alu -1 311 3 2401 197 20 61 chr17 31918981 31919439 -53519041 - L1ME2 LINE L1 -307 5857 5427 198 0 0 0 chr17 31919443 31919465 -53519015 + (T)n Simple_repeat Simple_repeat 1 22 0 308 223 58 58 chr17 31919465 31919586 -53518894 - L1MC5 LINE L1 -370 7591 7471 24 67 0 0 chr17 31919601 31919646 -53518834 + AT_rich Low_complexity Low_complexity 1 45 0 825 161 0 0 chr17 31919652 31919770 -53518710 - AluJb SINE Alu -194 118 1 663 158 42 0 chr17 31919773 31919893 -53518587 - L1MD3 LINE L1 -31 7964 7840 1574 211 3 3 chr17 31919893 31920187 -53518293 + AluJo SINE Alu 1 294 -18 2021 149 0 3 chr17 31920188 31920484 -53517996 + AluSx SINE Alu 1 295 -17 1813 177 7 0 chr17 31920626 31920920 -53517560 - AluJb SINE Alu -16 296 1 198 0 0 0 chr17 31921581 31921603 -53516877 + (A)n Simple_repeat Simple_repeat 1 22 0 268 381 38 12 chr17 31921609 31921769 -53516711 + MIR SINE MIR 20 183 -79 2135 122 0 3 chr17 31921838 31922132 -53516348 + AluSg SINE Alu 3 295 -15 2075 143 0 7 chr17 31922687 31922988 -53515492 - AluSx SINE Alu -13 299 1 2189 78 25 14 chr17 31923560 31923886 -53514594 + AluSp SINE Alu 1 329 0 258 305 30 54 chr17 31924038 31924205 -53514275 - MIR SINE MIR -10 252 90 1724 184 0 0 chr17 31924210 31924514 -53513966 + AluJb SINE Alu 1 304 0 983 178 18 0 chr17 31924519 31924682 -53513798 + FRAM SINE Alu 1 158 -18 2143 126 0 0 chr17 31926106 31926400 -53512080 + AluSx SINE Alu 1 294 -18 2593 58 0 7 chr17 31926402 31926710 -53511770 + AluY SINE Alu 1 306 -5 2146 119 7 0 chr17 31927128 31927430 -53511050 + AluSx SINE Alu 1 304 -8 1276 186 5 5 chr17 31927771 31927991 -53510489 + AluJo SINE Alu 1 220 -92 2130 58 46 0 chr17 31928163 31928424 -53510056 - AluY SINE Alu -14 297 25 1768 222 97 29 chr17 31928481 31928959 -53509521 - HAL1 LINE L1 -832 1675 1148 1861 115 79 4 chr17 31928959 31929238 -53509242 - AluSx SINE Alu -12 300 1 1768 222 97 29 chr17 31929238 31929345 -53509135 - HAL1 LINE L1 -1359 1148 1050 787 144 0 50 chr17 31929368 31929507 -53508973 - FLAM_C SINE Alu -1 132 1 1226 155 21 10 chr17 31929545 31929739 -53508741 + AluJo SINE Alu 12 207 -105 2290 110 48 20 chr17 31929740 31930094 -53508386 - THE1B LTR MaLR 0 364 1 2483 77 0 0 chr17 31930094 31930404 -53508076 - THE1B-int LTR MaLR 0 1580 1271 2526 72 0 3 chr17 31930404 31930708 -53507772 - AluY SINE Alu -8 303 1 259 214 0 0 chr17 31930709 31930765 -53507715 - L1PA14 LINE L1 -122 6039 5984 1290 103 0 0 chr17 31930795 31930960 -53507520 - AluSg/x SINE Alu -14 296 132 298 101 58 29 chr17 31930960 31931029 -53507451 - L1MD3 LINE L1 -120 7875 7805 774 243 23 0 chr17 31931036 31931209 -53507271 - AluJo SINE Alu -16 296 120 1417 189 8 0 chr17 31931210 31931474 -53507006 - L1MD3 LINE L1 -205 7790 7525 1853 236 153 40 chr17 31931490 31931776 -53506704 - HAL1 LINE L1 -1542 965 713 1999 100 4 0 chr17 31931776 31932036 -53506444 + AluSg SINE Alu 1 261 -49 1853 236 153 40 chr17 31932036 31932534 -53505946 - HAL1 LINE L1 -1794 713 92 2128 121 0 0 chr17 31932536 31932851 -53505629 - AluSx SINE Alu 0 315 1 714 151 0 0 chr17 31932873 31932979 -53505501 - FLAM_C SINE Alu -36 107 2 266 169 0 84 chr17 31932986 31933069 -53505411 + T-rich Low_complexity Low_complexity 1 76 0 24 32 0 0 chr17 31933215 31933246 -53505234 + AT_rich Low_complexity Low_complexity 1 31 0 2374 104 0 0 chr17 31933344 31933642 -53504838 - AluSg1 SINE Alu -11 298 1 2366 100 0 0 chr17 31933849 31934150 -53504330 + AluSx SINE Alu 1 301 -11 1718 162 62 3 chr17 31934174 31934464 -53504016 - AluJb SINE Alu -5 307 1 317 247 0 43 chr17 31934601 31934694 -53503786 + L1MC4 LINE L1 6615 6703 -1339 2066 132 7 0 chr17 31934699 31935009 -53503471 - AluSx SINE Alu 0 312 1 2271 114 3 0 chr17 31935430 31935727 -53502753 - AluSx SINE Alu -14 298 1 456 307 129 0 chr17 31935727 31935952 -53502528 + MER112 DNA MER1_type 6 259 -1 878 178 18 6 chr17 31936051 31936214 -53502266 - FAM SINE Alu -13 172 8 451 262 47 52 chr17 31936566 31936738 -53501742 - MER5B DNA MER1_type -1 177 7 242 271 0 17 chr17 31938103 31938162 -53500318 + CT-rich Low_complexity Low_complexity 5 62 0 2184 103 13 19 chr17 31938169 31938480 -53500000 - AluSx SINE Alu -3 309 1 240 75 0 0 chr17 31938508 31938548 -53499932 - AluSx SINE Alu 0 302 263 1705 84 14 5 chr17 31938548 31938761 -53499719 - AluSx SINE Alu -97 215 1 401 93 0 0 chr17 31938761 31938815 -53499665 - AluSp SINE Alu -184 129 76 553 41 27 0 chr17 31938890 31938963 -53499517 - AluSc SINE Alu -11 298 224 2337 78 0 0 chr17 31938979 31939318 -53499162 - AluY SINE Alu 0 339 1 1810 172 3 0 chr17 31939381 31939671 -53498809 + AluJo SINE Alu 1 291 -21 1359 143 22 36 chr17 31939691 31939915 -53498565 - AluJo SINE Alu -8 304 84 663 179 46 33 chr17 31939995 31940146 -53498334 - MER5A DNA MER1_type -34 155 3 2701 61 0 0 chr17 31940447 31940773 -53497707 - LTR17 LTR ERV1 -454 326 1 28735 45 7 6 chr17 31940773 31944175 -53494305 - HERV17 LTR ERV1 0 8626 5220 2298 97 7 3 chr17 31944195 31944495 -53493985 - AluSx SINE Alu -11 301 1 797 176 0 0 chr17 31944501 31944632 -53493848 - FLAM_C SINE Alu 0 133 3 28 0 0 0 chr17 31944788 31944816 -53493664 + AT_rich Low_complexity Low_complexity 1 28 0 633 75 11 11 chr17 31944892 31944986 -53493494 - L1PA7 LINE L1 0 6154 6061 25 0 0 0 chr17 31945209 31945234 -53493246 + AT_rich Low_complexity Low_complexity 1 25 0 1822 149 3 50 chr17 31945281 31945417 -53493063 + AluJo SINE Alu 1 142 -170 2291 115 0 0 chr17 31945417 31945713 -53492767 + AluSg1 SINE Alu 1 296 -13 2161 77 33 0 chr17 31945715 31946034 -53492446 + AluY SINE Alu 1 328 0 1822 149 3 50 chr17 31946034 31946214 -53492266 + AluJo SINE Alu 143 306 -6 2347 104 0 3 chr17 31947151 31947459 -53491021 - AluSg SINE Alu -3 307 1 1989 167 0 3 chr17 31947461 31947761 -53490719 - AluSx SINE Alu -13 299 1 397 253 99 43 chr17 31948155 31948317 -53490163 - MER5B DNA MER1_type 0 178 8 180 0 0 0 chr17 31948668 31948688 -53489792 + (TTTTA)n Simple_repeat Simple_repeat 1 20 0 828 118 0 8 chr17 31948715 31948834 -53489646 - FLAM_C SINE Alu -15 118 1 297 277 106 0 chr17 31948845 31948939 -53489541 - MIR SINE MIR -67 141 38 337 303 108 32 chr17 31949169 31949354 -53489126 + MER20 DNA MER1_type 16 214 -5 259 270 112 11 chr17 31949852 31949941 -53488539 + MIR3 SINE MIR 67 164 -44 2342 103 7 0 chr17 31950263 31950573 -53487907 - AluSx SINE Alu 0 312 1 2202 92 18 0 chr17 31950573 31950855 -53487625 - AluSp SINE Alu -13 300 14 2041 142 7 3 chr17 31950894 31951196 -53487284 - AluSx SINE Alu -9 303 1 2003 99 16 53 chr17 31951460 31951763 -53486717 - AluSg SINE Alu -18 292 1 1413 235 122 64 chr17 31951765 31952179 -53486301 + L1MC4 LINE L1 5518 5907 -2135 2131 133 36 0 chr17 31952179 31952481 -53485999 + AluSq SINE Alu 1 313 0 1413 235 122 64 chr17 31952481 31953166 -53485314 + L1MC4 LINE L1 5907 7090 -952 2494 125 8 5 chr17 31953170 31953561 -53484919 + L1PA15 LINE L1 5766 6157 -8 871 182 6 29 chr17 31953649 31953819 -53484661 + FRAM SINE Alu 1 166 0 329 160 154 138 chr17 31953821 31953975 -53484505 + L1MC4 LINE L1 7894 8041 -1 203 213 16 49 chr17 31954003 31954064 -53484416 + MIR3 SINE MIR 120 178 -30 2116 84 4 0 chr17 31954133 31954395 -53484085 + AluSq SINE Alu 1 263 -50 2196 114 7 0 chr17 31955044 31955343 -53483137 + AluSp SINE Alu 1 301 -12 2180 103 17 0 chr17 31955408 31955700 -53482780 + AluSq SINE Alu 1 297 -16 1639 87 104 0 chr17 31955706 31955936 -53482544 + AluSx SINE Alu 1 254 -58 23 33 0 0 chr17 31956463 31956493 -53481987 + GC_rich Low_complexity Low_complexity 1 30 0 31 92 0 0 chr17 31956704 31956791 -53481689 + GC_rich Low_complexity Low_complexity 1 87 0 579 273 93 10 chr17 31957371 31957565 -53480915 - MIR SINE MIR -2 260 51 198 0 0 0 chr17 31957715 31957737 -53480743 + (A)n Simple_repeat Simple_repeat 1 22 0 2110 96 7 3 chr17 31957742 31958048 -53480432 + AluSq SINE Alu 2 308 0 1006 261 132 34 chr17 31958169 31958715 -53479765 - L2 LINE L2 -4 3309 2690 2399 88 3 10 chr17 31958715 31959022 -53479458 + AluSq SINE Alu 1 305 -8 1006 261 132 34 chr17 31959022 31959056 -53479424 - L2 LINE L2 -623 2690 2661 725 164 16 8 chr17 31959076 31959198 -53479282 + FLAM_A SINE Alu 1 123 -10 1935 146 20 0 chr17 31959520 31959815 -53478665 + AluSx SINE Alu 1 301 -11 1795 175 0 19 chr17 31959915 31960224 -53478256 + AluJb SINE Alu 1 303 -9 185 314 242 0 chr17 31960344 31960468 -53478012 - L2 LINE L2 -920 2394 2241 2512 68 0 0 chr17 31960621 31960916 -53477564 + AluY SINE Alu 1 295 -16 489 218 23 23 chr17 31960997 31961130 -53477350 - MER94 DNA DNA 0 134 2 212 186 29 57 chr17 31961279 31961349 -53477131 + L2 LINE L2 3014 3081 -191 21 0 0 0 chr17 31961469 31961490 -53476990 + AT_rich Low_complexity Low_complexity 1 21 0 1736 192 3 3 chr17 31961733 31962030 -53476450 + AluJb SINE Alu 1 297 -15 5347 123 30 46 chr17 31962031 31962138 -53476342 + L1MA8 LINE L1 5194 5301 -990 2108 85 11 0 chr17 31962138 31962409 -53476071 + AluSq SINE Alu 40 313 0 5347 123 30 46 chr17 31962409 31962830 -53475650 + L1MA8 LINE L1 5301 5727 -564 264 30 0 0 chr17 31962830 31962863 -53475617 + (CA)n Simple_repeat Simple_repeat 2 34 0 5347 123 30 46 chr17 31962863 31963168 -53475312 + L1MA8 LINE L1 5727 6084 -207 2358 113 0 0 chr17 31963168 31963479 -53475001 + AluSx SINE Alu 1 311 -1 5347 123 30 46 chr17 31963479 31963673 -53474807 + L1MA8 LINE L1 6084 6279 -12 26 64 0 0 chr17 31963696 31963743 -53474737 + AT_rich Low_complexity Low_complexity 1 47 0 365 288 62 50 chr17 31964239 31964307 -53474173 + MIR SINE MIR 23 89 -173 2318 101 0 3 chr17 31964307 31964605 -53473875 + AluSq SINE Alu 1 297 -16 365 288 62 50 chr17 31964605 31964696 -53473784 + MIR SINE MIR 89 184 -78 1923 150 0 7 chr17 31964704 31964997 -53473483 + AluSx SINE Alu 1 291 -21 247 278 8 75 chr17 31965768 31965901 -53472579 - MIR SINE MIR -38 224 101 1766 113 0 12 chr17 31966262 31966510 -53471970 - AluSq SINE Alu -19 294 50 2220 105 0 0 chr17 31966738 31967033 -53471447 - AluSg SINE Alu -15 295 1 344 227 13 0 chr17 31967149 31967224 -53471256 + MIR SINE MIR 30 105 -157 282 325 62 53 chr17 31967251 31967274 -53471206 - L2 LINE L2 -458 2856 2835 2208 111 14 0 chr17 31967274 31967563 -53470917 + AluSx SINE Alu 1 293 -19 282 325 62 53 chr17 31967563 31967748 -53470732 - L2 LINE L2 -479 2835 2646 3258 61 3 3 chr17 31968657 31969049 -53469431 + L1PA6 LINE L1 5751 6142 -12 2293 113 3 0 chr17 31969589 31969891 -53468589 - AluSx SINE Alu -9 303 1 497 133 200 0 chr17 31969999 31970089 -53468391 + AluSg/x SINE Alu 192 299 -13 1428 167 47 8 chr17 31970098 31970355 -53468125 - AluJo SINE Alu -45 267 1 391 267 92 0 chr17 31970952 31971072 -53467408 - MIR SINE MIR -72 190 60 2052 124 0 23 chr17 31971310 31971609 -53466871 - AluSx SINE Alu -20 292 1 180 111 0 0 chr17 31971845 31971872 -53466608 + (A)n Simple_repeat Simple_repeat 1 27 0 1145 92 0 92 chr17 31972056 31972221 -53466259 - AluSq SINE Alu -15 298 152 2300 81 7 0 chr17 31972221 31972516 -53465964 - AluSg SINE Alu -13 297 1 1145 92 0 92 chr17 31972516 31972545 -53465935 - AluSq SINE Alu -161 152 122 2112 77 0 61 chr17 31972572 31972753 -53465727 - AluSq SINE Alu -3 310 119 2322 80 3 17 chr17 31972753 31973055 -53465425 - AluSp SINE Alu -15 298 1 2242 97 3 0 chr17 31973065 31973354 -53465126 - AluSp SINE Alu -23 290 1 2112 77 0 61 chr17 31973354 31973471 -53465009 - AluSq SINE Alu -203 110 20 1619 179 31 7 chr17 31973833 31974124 -53464356 - AluJo SINE Alu -12 300 3 3733 196 26 55 chr17 31974143 31974994 -53463486 - LTR1B LTR ERV1 0 826 1 2206 65 29 59 chr17 31975479 31975659 -53462821 - AluSg SINE Alu -13 297 128 2391 77 3 6 chr17 31975659 31975971 -53462509 - AluY SINE Alu 0 311 1 2206 65 29 59 chr17 31975971 31976096 -53462384 - AluSg SINE Alu -182 128 1 558 220 143 82 chr17 31976343 31976470 -53462010 - MIR SINE MIR 0 262 144 2325 112 0 0 chr17 31976470 31976774 -53461706 - AluSx SINE Alu -8 304 1 558 220 143 82 chr17 31976774 31976891 -53461589 - MIR SINE MIR -118 144 3 2247 95 3 3 chr17 31976916 31977210 -53461270 - AluSx SINE Alu -18 294 1 1730 152 24 17 chr17 31977305 31977462 -53461018 - AluJo SINE Alu -21 291 137 207 0 0 0 chr17 31977462 31977485 -53460995 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2173 102 0 3 chr17 31977485 31977768 -53460712 - AluSg1 SINE Alu -27 282 1 1730 152 24 17 chr17 31977768 31977898 -53460582 - AluJo SINE Alu -174 138 1 361 209 77 0 chr17 31978026 31978117 -53460363 - L1ME4a LINE L1 -152 5969 5872 2173 110 7 16 chr17 31978898 31979207 -53459273 + AluSx SINE Alu 1 306 -6 333 254 81 42 chr17 31979814 31979866 -53458614 - L1ME4a LINE L1 -11 6110 6061 1717 121 94 0 chr17 31979866 31980131 -53458349 - AluSg SINE Alu -20 290 1 333 254 81 42 chr17 31980131 31980338 -53458142 - L1ME4a LINE L1 -60 6061 5841 2026 129 14 3 chr17 31980345 31980640 -53457840 - AluJb SINE Alu -14 298 1 1625 127 4 0 chr17 31980640 31980877 -53457603 - L1M1 LINE L1 -562 5738 5501 303 28 0 0 chr17 31981093 31981129 -53457351 + (TG)n Simple_repeat Simple_repeat 2 37 0 3382 221 53 14 chr17 31981296 31982053 -53456427 + MER21B LTR ERV1 1 786 -77 2573 65 3 0 chr17 31982170 31982476 -53456004 + AluSp SINE Alu 1 307 -6 2110 134 0 10 chr17 31982484 31982791 -53455689 + AluSx SINE Alu 1 304 -8 353 331 33 16 chr17 31982792 31982913 -53455567 + MER5A DNA MER1_type 66 188 -1 282 157 20 0 chr17 31982918 31982969 -53455511 + MIR SINE MIR 206 257 -5 2478 67 10 0 chr17 31983027 31983324 -53455156 + AluY SINE Alu 1 300 -11 3520 91 5 89 chr17 31983362 31983990 -53454490 - L1MA3 LINE L1 -477 5828 5254 1202 82 58 18 chr17 31984109 31984280 -53454200 - L1PA11 LINE L1 0 6174 5997 879 167 0 0 chr17 31984554 31984680 -53453800 - FLAM_C SINE Alu -6 127 2 521 238 111 29 chr17 31984876 31985048 -53453432 - MIR SINE MIR -12 250 65 793 181 8 16 chr17 31985325 31985452 -53453028 - FLAM_C SINE Alu -3 130 5 1315 119 0 0 chr17 31985527 31985704 -53452776 - AluSg/x SINE Alu -3 307 131 237 108 0 0 chr17 31985975 31986012 -53452468 + (TG)n Simple_repeat Simple_repeat 2 38 0 1565 298 135 33 chr17 31986120 31986603 -53451877 + L2 LINE L2 1670 2102 -1212 2233 115 3 3 chr17 31986603 31986915 -53451565 - AluSx SINE Alu 0 312 1 1565 298 135 33 chr17 31986915 31987352 -53451128 + L2 LINE L2 2102 2684 -630 1558 178 56 3 chr17 31987370 31987657 -53450823 - AluJo SINE Alu -10 302 1 535 297 192 50 chr17 31987696 31988101 -53450379 + L2 LINE L2 2833 3301 -12 1594 181 22 35 chr17 31988101 31988415 -53450065 + AluJo SINE Alu 1 310 -2 535 297 192 50 chr17 31988415 31988430 -53450050 + L2 LINE L2 3301 3313 0 1749 144 4 0 chr17 31988521 31988771 -53449709 - AluSx SINE Alu -61 251 1 750 263 72 7 chr17 31988791 31989084 -53449396 - L1M4 LINE L1 -2651 3495 3184 1132 224 119 2 chr17 31989127 31989529 -53448951 - L1M4 LINE L1 -3167 2979 2531 1725 167 28 11 chr17 31989538 31989851 -53448629 + AluSx SINE Alu 1 312 0 1848 236 75 8 chr17 31989857 31990374 -53448106 + L1ME3 LINE L1 5307 5858 -312 2011 126 7 10 chr17 31990428 31990722 -53447758 + AluSx SINE Alu 1 293 -19 1003 243 22 29 chr17 31990727 31991040 -53447440 + L1ME3 LINE L1 5851 6161 -1 444 299 50 53 chr17 31991058 31991216 -53447264 + L1M4b LINE L1 11 169 -6690 2607 61 0 0 chr17 31991216 31991527 -53446953 + AluY SINE Alu 1 311 0 444 299 50 53 chr17 31991527 31991649 -53446831 + L1M4b LINE L1 169 290 -6569 857 220 26 137 chr17 31992063 31992449 -53446031 + L1M4b LINE L1 1207 1549 -5310 813 164 16 0 chr17 31992476 31992604 -53445876 - AluJb SINE Alu -178 134 5 2345 62 21 0 chr17 31992618 31992909 -53445571 - AluSp SINE Alu -16 297 1 2404 198 47 88 chr17 31992943 31992966 -53445514 + L1MD2 LINE L1 5264 5286 -1073 1235 178 182 16 chr17 31992966 31993224 -53445256 + AluJo SINE Alu 2 302 0 2404 198 47 88 chr17 31993224 31994252 -53444228 + L1MD2 LINE L1 5286 5991 -368 3875 154 22 110 chr17 31993277 31993552 -53444928 + L1MB8 LINE L1 5351 5649 -529 2302 99 0 0 chr17 31993552 31993846 -53444634 - AluSx SINE Alu -18 294 1 3875 154 22 110 chr17 31993846 31994328 -53444152 + L1MB8 LINE L1 5649 6017 -161 864 129 8 16 chr17 31994328 31994452 -53444028 + FLAM_A SINE Alu 1 123 -10 3875 154 22 110 chr17 31994452 31994601 -53443879 + L1MB8 LINE L1 6017 6178 0 1788 224 18 84 chr17 31994586 31994829 -53443651 + L1M4 LINE L1 4257 4515 -1631 * 529 145 36 0 chr17 31994829 31994912 -53443568 + AluSx SINE Alu 1 86 -226 2441 68 0 23 chr17 31994912 31995219 -53443261 + AluSq SINE Alu 1 300 -13 1552 114 21 13 chr17 31995219 31995454 -53443026 + AluSx SINE Alu 73 311 -1 1788 224 18 84 chr17 31995454 31995835 -53442645 + L1M4 LINE L1 4512 4871 -1275 1512 158 24 20 chr17 31998768 31999015 -53439465 - AluJo SINE Alu -63 249 2 873 193 13 0 chr17 31999300 31999450 -53439030 + FRAM SINE Alu 1 152 -14 341 235 0 9 chr17 31999523 31999568 -53438912 + (TA)n Simple_repeat Simple_repeat 1 45 -69 2099 109 0 36 chr17 31999568 31999871 -53438609 + AluSq SINE Alu 1 292 -21 341 235 0 9 chr17 31999871 31999940 -53438540 + (TA)n Simple_repeat Simple_repeat 45 114 0 2366 93 3 0 chr17 31999961 32000262 -53438218 - AluSp SINE Alu -11 302 1 2038 131 0 0 chr17 32000405 32000688 -53437792 + AluSx SINE Alu 1 283 -29 937 144 40 46 chr17 32000696 32000817 -53437663 + MLT1A1 LTR MaLR 29 150 -215 2488 69 0 0 chr17 32000817 32001120 -53437360 + AluY SINE Alu 1 303 -8 937 144 40 46 chr17 32001120 32001171 -53437309 + MLT1A1 LTR MaLR 150 200 -165 1401 150 21 91 chr17 32001175 32001461 -53437019 + MER51B LTR ERV1 5 270 -107 2262 98 0 16 chr17 32001463 32001779 -53436701 - AluY SINE Alu 0 311 1 949 140 0 0 chr17 32001779 32001915 -53436565 - AluSq/x SINE Alu -176 136 1 846 105 0 8 chr17 32001915 32002039 -53436441 + MER51B LTR ERV1 255 377 0 1129 90 34 40 chr17 32002039 32002216 -53436264 + MER51B-int LTR ERV1 1 176 -7640 3413 153 10 17 chr17 32002230 32002807 -53435673 + MER51B-int LTR ERV1 418 990 -6826 * 8728 112 10 26 chr17 32002794 32003582 -53434898 + MER51B-int LTR ERV1 1093 1892 -5924 2143 123 10 0 chr17 32003582 32003882 -53434598 + AluSx SINE Alu 1 303 -9 8728 112 10 26 chr17 32003882 32004545 -53433935 + MER51B-int LTR ERV1 1892 2522 -5294 1941 142 0 26 chr17 32004545 32004848 -53433632 - AluSx SINE Alu -17 295 1 1205 94 62 168 chr17 32005820 32005946 -53432534 - MER30 DNA MER1_type -1 229 91 2404 82 3 3 chr17 32005946 32006249 -53432231 + AluSp SINE Alu 1 303 -10 258 32 0 0 chr17 32006259 32006290 -53432190 + (TG)n Simple_repeat Simple_repeat 2 32 0 1205 94 62 168 chr17 32006290 32006320 -53432160 - MER30 DNA MER1_type -148 82 50 2269 106 3 3 chr17 32006320 32006623 -53431857 - AluSc SINE Alu -3 306 4 1205 94 62 168 chr17 32006623 32006710 -53431770 - MER30 DNA MER1_type -180 50 1 672 251 115 17 chr17 32006788 32007023 -53431457 + MIR SINE MIR 2 259 -3 2080 137 0 3 chr17 32007079 32007371 -53431109 + AluSx SINE Alu 1 291 -21 277 244 128 23 chr17 32007373 32007459 -53431021 - L2 LINE L2 -14 3299 3205 2367 98 3 0 chr17 32008141 32008446 -53430034 - AluSx SINE Alu -5 307 2 261 143 0 0 chr17 32008474 32008516 -53429964 - L1ME1 LINE L1 -5 6161 6120 1703 166 4 4 chr17 32008534 32008812 -53429668 - AluJo SINE Alu -34 278 1 1020 225 119 7 chr17 32008812 32009090 -53429390 - L1ME1 LINE L1 -33 6133 5828 27 62 0 0 chr17 32009159 32009207 -53429273 + AT_rich Low_complexity Low_complexity 1 48 0 245 244 35 12 chr17 32009339 32009425 -53429055 + MIR SINE MIR 41 128 -80 2144 112 0 37 chr17 32009658 32009980 -53428500 - AluSx SINE Alu -2 310 1 785 269 216 36 chr17 32010364 32011036 -53427444 - LTR50 LTR ERVL -2 793 1 305 265 92 10 chr17 32011041 32011139 -53427341 - MIR SINE MIR -111 151 46 551 187 30 126 chr17 32011157 32011240 -53427240 - MER104 DNA MER2_type -1719 179 90 2102 122 7 0 chr17 32011240 32011536 -53426944 + AluSx SINE Alu 1 298 -14 551 187 30 126 chr17 32011536 32011589 -53426891 - MER104 DNA MER2_type -1808 90 65 1530 188 3 58 chr17 32011589 32011898 -53426582 - AluJb SINE Alu -20 292 1 551 187 30 126 chr17 32011898 32011958 -53426522 - MER104 DNA MER2_type -1833 65 1 343 336 21 21 chr17 32011977 32012120 -53426360 - L2 LINE L2 -952 2362 2220 823 141 16 8 chr17 32012848 32012976 -53425504 + FRAM SINE Alu 26 154 -22 2643 142 19 12 chr17 32014976 32015399 -53423081 - MSTB LTR MaLR 0 426 1 191 337 36 0 chr17 32015431 32015514 -53422966 + MIR SINE MIR 104 189 -73 2265 114 0 0 chr17 32015546 32015844 -53422636 - AluSc SINE Alu -11 298 1 315 256 84 110 chr17 32016001 32016071 -53422409 - L2 LINE L2 -167 3105 3035 2130 133 7 0 chr17 32016071 32016379 -53422101 + AluSx SINE Alu 1 310 -2 315 256 84 110 chr17 32016379 32016499 -53421981 - L2 LINE L2 -237 3035 2920 360 0 0 0 chr17 32016667 32016707 -53421773 + (TG)n Simple_repeat Simple_repeat 2 41 0 385 224 79 33 chr17 32016708 32016860 -53421620 - L1MC5 LINE L1 -58 7903 7745 1936 172 7 0 chr17 32016931 32017239 -53421241 + AluJb SINE Alu 1 310 -2 24 67 0 0 chr17 32017540 32017585 -53420895 + AT_rich Low_complexity Low_complexity 1 45 0 1069 91 0 0 chr17 32017633 32017776 -53420704 - AluSg/x SINE Alu -36 276 134 2041 84 13 58 chr17 32017776 32018085 -53420395 - AluSc SINE Alu -14 295 1 995 73 0 48 chr17 32018279 32018436 -53420044 - L1PA8A LINE L1 -657 5474 5324 911 86 0 0 chr17 32018436 32018551 -53419929 + L1PA10 LINE L1 6033 6149 -19 22 35 0 0 chr17 32018571 32018600 -53419880 + AT_rich Low_complexity Low_complexity 1 29 0 279 218 274 24 chr17 32018658 32018782 -53419698 + MIR SINE MIR 88 242 -20 2356 91 0 3 chr17 32021914 32022221 -53416259 - AluSg1 SINE Alu -2 307 2 262 119 0 0 chr17 32023387 32023429 -53415051 + U5 snRNA snRNA 1 42 -74 1937 151 3 0 chr17 32025078 32025376 -53413104 - AluSx SINE Alu -13 299 1 2023 141 0 7 chr17 32025459 32025750 -53412730 - AluSx SINE Alu -23 289 1 2514 71 3 0 chr17 32025893 32026202 -53412278 - AluSp SINE Alu -1 312 3 378 169 0 36 chr17 32026318 32026401 -53412079 + MER116 DNA Mariner 1 80 0 22 0 0 0 chr17 32026774 32026796 -53411684 + AT_rich Low_complexity Low_complexity 1 22 0 1991 156 22 22 chr17 32027764 32028130 -53410350 + MER47A DNA MER2_type 1 366 0 641 246 0 0 chr17 32028164 32028290 -53410190 + FLAM_C SINE Alu 1 126 -17 338 297 128 65 chr17 32028606 32028671 -53409809 + L1MEd LINE L1 18 77 -6042 372 104 0 0 chr17 32028671 32028738 -53409742 + (TAGA)n Simple_repeat Simple_repeat 4 70 0 338 297 128 65 chr17 32028738 32029039 -53409441 + L1MEd LINE L1 77 407 -5712 243 261 138 15 chr17 32029251 32029446 -53409034 + L1MEd LINE L1 730 948 -5171 1734 137 0 0 chr17 32029449 32029690 -53408790 + AluSg/x SINE Alu 71 311 -1 630 175 0 0 chr17 32029755 32029852 -53408628 + FRAM SINE Alu 41 137 -39 554 235 55 51 chr17 32029973 32030352 -53408128 + MLT1H LTR MaLR 206 549 0 2244 116 0 0 chr17 32031006 32031308 -53407172 - AluSx SINE Alu -10 302 1 219 69 0 0 chr17 32031705 32031734 -53406746 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 469 287 53 62 chr17 32031780 32032121 -53406359 + MLT1H-int LTR MaLR 1033 1370 -1 1438 209 100 60 chr17 32032124 32032636 -53405844 + MLT1H LTR MaLR 3 534 -15 507 270 58 109 chr17 32032644 32033129 -53405351 + L1MEd LINE L1 1056 1556 -4614 1991 169 0 0 chr17 32034410 32034717 -53403763 + AluJb SINE Alu 1 307 -5 233 188 29 58 chr17 32034718 32034787 -53403693 - MLT1J LTR MaLR -50 461 395 993 220 0 0 chr17 32034805 32034991 -53403489 + MER58A DNA MER1_type 39 224 0 609 307 49 22 chr17 32035035 32035302 -53403178 - MLT1J LTR MaLR -237 274 1 335 235 39 89 chr17 32036493 32036672 -53401808 - MLT1J LTR MaLR 0 511 342 252 86 0 0 chr17 32036672 32036707 -53401773 + (TTTTC)n Simple_repeat Simple_repeat 4 38 0 2334 112 0 13 chr17 32036836 32037149 -53401331 + AluSx SINE Alu 1 309 -3 306 0 0 0 chr17 32037149 32037183 -53401297 + (TA)n Simple_repeat Simple_repeat 2 35 0 2263 106 0 7 chr17 32037251 32037552 -53400928 + AluSx SINE Alu 1 299 -13 474 124 56 0 chr17 32040099 32040188 -53398292 - L1MA8 LINE L1 -127 6164 6071 23 0 0 0 chr17 32040196 32040219 -53398261 + AT_rich Low_complexity Low_complexity 1 23 0 22 43 0 21 chr17 32040685 32040701 -53397779 + AT_rich Low_complexity Low_complexity 1 16 -30 1598 172 56 0 chr17 32040701 32040968 -53397512 - AluJo SINE Alu -30 282 1 22 43 0 21 chr17 32040968 32040998 -53397482 + AT_rich Low_complexity Low_complexity 16 46 0 616 300 39 39 chr17 32041180 32041388 -53397092 + MER102b DNA MER1_type 2 213 -1215 2174 107 0 0 chr17 32041388 32041704 -53396776 + AluSq SINE Alu 3 318 0 616 300 39 39 chr17 32041704 32041824 -53396656 + MER102b DNA MER1_type 212 331 -10 307 189 278 0 chr17 32042160 32042250 -53396230 + L2 LINE L2 3195 3309 -4 1342 97 0 38 chr17 32042314 32042500 -53395980 - AluSg/x SINE Alu -12 300 122 1124 115 6 0 chr17 32042575 32042731 -53395749 - AluSq SINE Alu -156 157 1 565 273 90 100 chr17 32042736 32043036 -53395444 - L2 LINE L2 0 3272 2976 303 187 53 0 chr17 32043607 32043682 -53394798 + L1ME2 LINE L1 6085 6166 0 2457 70 0 13 chr17 32044010 32044323 -53394157 - AluY SINE Alu -2 309 1 2414 77 0 6 chr17 32046378 32046689 -53391791 - AluY SINE Alu -2 309 1 2199 108 0 0 chr17 32046787 32047075 -53391405 - AluSc SINE Alu -21 288 1 249 284 91 51 chr17 32047081 32047274 -53391206 - L1MC4a LINE L1 -1639 6169 5958 2333 121 8 30 chr17 32047274 32047646 -53390834 - THE1B LTR MaLR 0 364 1 249 284 91 51 chr17 32047646 32047748 -53390732 - L1MC4a LINE L1 -1850 5958 5862 4176 168 14 1 chr17 32047802 32048584 -53389896 + L1MB2 LINE L1 5380 6171 0 257 228 0 0 chr17 32048636 32048693 -53389787 - L1MC4a LINE L1 -2059 5749 5693 2181 115 3 0 chr17 32049765 32050061 -53388419 + AluSp SINE Alu 1 297 -16 286 184 58 46 chr17 32050088 32050175 -53388305 + MIR SINE MIR 173 260 -2 332 307 118 0 chr17 32050220 32050347 -53388133 - L1MC/D LINE L1 -1988 5820 5679 1536 175 6 60 chr17 32050699 32051014 -53387466 + AluJo SINE Alu 1 298 -14 564 326 72 48 chr17 32051258 32051884 -53386596 - L2 LINE L2 -183 3089 2439 2067 126 0 17 chr17 32053051 32053353 -53385127 - AluSg SINE Alu -13 297 1 768 161 0 8 chr17 32053432 32053556 -53384924 + AluJo SINE Alu 13 135 -177 986 208 127 9 chr17 32053597 32053809 -53384671 - MER8 DNA MER2_type -1 238 2 2078 93 11 0 chr17 32054397 32054677 -53383803 - AluSc SINE Alu -26 283 1 207 0 0 0 chr17 32054678 32054701 -53383779 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1722 171 0 11 chr17 32054701 32054988 -53383492 - AluJo SINE Alu -28 284 1 21 0 0 0 chr17 32055700 32055721 -53382759 + AT_rich Low_complexity Low_complexity 1 21 0 1874 159 0 7 chr17 32055721 32056011 -53382469 - AluJb SINE Alu -24 288 1 258 125 0 0 chr17 32056141 32056189 -53382291 - MADE1 DNA Mariner 0 80 33 264 30 0 0 chr17 32056204 32056237 -53382243 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 1767 180 0 7 chr17 32056239 32056523 -53381957 - AluJb SINE Alu -30 282 1 2636 269 61 45 chr17 32057628 32058305 -53380175 + L1ME3A LINE L1 3712 4377 -1793 1796 181 3 7 chr17 32058305 32058592 -53379888 + AluJo SINE Alu 1 286 -26 2636 269 61 45 chr17 32058592 32059394 -53379086 + L1ME3A LINE L1 4377 5165 -1005 1727 152 4 4 chr17 32059394 32059664 -53378816 + AluJo SINE Alu 21 290 -22 2636 269 61 45 chr17 32059664 32060352 -53378128 + L1ME3A LINE L1 5165 5956 -214 2053 145 0 19 chr17 32060574 32060892 -53377588 - AluSx SINE Alu 0 312 1 221 226 38 19 chr17 32061854 32061907 -53376573 - L3 LINE CR1 -1 1576 1523 598 227 0 111 chr17 32062019 32062191 -53376289 - MIR3 SINE MIR -55 153 1 308 75 0 38 chr17 32064517 32064570 -53373910 + (GGA)n Simple_repeat Simple_repeat 1 51 0 215 139 28 0 chr17 32064913 32064949 -53373531 + CT-rich Low_complexity Low_complexity 1 37 0 739 163 0 57 chr17 32066202 32066343 -53372137 - FLAM_C SINE Alu 0 133 1 2275 91 3 0 chr17 32066999 32067328 -53371152 - AluSp SINE Alu 0 330 1 2072 95 33 0 chr17 32067335 32067648 -53370832 - AluSp SINE Alu 0 322 1 2320 64 0 0 chr17 32067834 32068141 -53370339 + AluY SINE Alu 2 308 0 2446 47 0 3 chr17 32068277 32068574 -53369906 - AluY SINE Alu -15 296 1 198 0 0 0 chr17 32069205 32069227 -53369253 + (A)n Simple_repeat Simple_repeat 1 22 0 2528 31 27 0 chr17 32069555 32069847 -53368633 - AluY SINE Alu -11 300 1 908 143 0 0 chr17 32069871 32070004 -53368476 - FLAM_C SINE Alu 0 133 1 21 0 0 0 chr17 32070464 32070485 -53367995 + AT_rich Low_complexity Low_complexity 1 21 0 234 0 0 0 chr17 32072443 32072469 -53366011 + (TA)n Simple_repeat Simple_repeat 1 26 0 2228 116 0 7 chr17 32073213 32073514 -53364966 - AluSx SINE Alu -11 301 3 584 159 44 9 chr17 32073606 32073719 -53364761 - MIR SINE MIR -41 221 105 521 252 189 9 chr17 32074386 32074569 -53363911 - MIR SINE MIR -44 218 3 33 0 0 0 chr17 32074944 32074977 -53363503 + AT_rich Low_complexity Low_complexity 1 33 0 186 133 0 0 chr17 32077444 32077474 -53361006 + (TTA)n Simple_repeat Simple_repeat 2 31 0 206 141 76 22 chr17 32077696 32077788 -53360692 + (TA)n Simple_repeat Simple_repeat 2 98 0 1237 219 131 88 chr17 32077836 32078540 -53359940 - MER21B LTR ERV1 -124 739 6 231 345 86 29 chr17 32078781 32078920 -53359560 - MER5B DNA MER1_type -30 148 2 1235 179 77 3 chr17 32078930 32079227 -53359253 - MER33 DNA MER1_type 0 324 6 478 218 148 0 chr17 32079540 32079641 -53358839 - FLAM_A SINE Alu -16 117 2 2410 77 0 0 chr17 32079678 32079978 -53358502 - AluY SINE Alu 0 311 12 2150 115 10 0 chr17 32080157 32080461 -53358019 - AluSp SINE Alu -6 307 1 234 62 0 0 chr17 32080579 32080611 -53357869 + (TTTTTG)n Simple_repeat Simple_repeat 5 36 0 225 0 0 0 chr17 32081232 32081257 -53357223 + (CA)n Simple_repeat Simple_repeat 2 26 0 301 115 16 16 chr17 32081257 32081318 -53357162 + (TG)n Simple_repeat Simple_repeat 2 62 0 1698 176 40 17 chr17 32084069 32084253 -53354227 - AluJb SINE Alu -3 309 114 309 51 0 0 chr17 32084253 32084292 -53354188 + (TG)n Simple_repeat Simple_repeat 2 40 0 1698 176 40 17 chr17 32084292 32084409 -53354071 - AluJb SINE Alu -198 114 1 839 153 0 44 chr17 32084653 32084790 -53353690 + FLAM_C SINE Alu 1 131 -2 225 0 0 0 chr17 32086667 32086692 -53351788 + (T)n Simple_repeat Simple_repeat 1 25 0 206 180 40 20 chr17 32092788 32092838 -53345642 + L2 LINE L2 3020 3070 -243 316 323 44 38 chr17 32092930 32093088 -53345392 - MIR SINE MIR -71 191 33 189 385 0 13 chr17 32093124 32093202 -53345278 - L2 LINE L2 -88 3184 3108 2770 249 178 52 chr17 32093539 32094789 -53343691 + L2 LINE L2 695 2102 -1212 244 204 0 0 chr17 32094796 32094850 -53343630 + L1ME1 LINE L1 6019 6072 -94 234 222 0 0 chr17 32096788 32096842 -53341638 + A-rich Low_complexity Low_complexity 1 54 0 1725 187 3 7 chr17 32098209 32098509 -53339971 + AluJo SINE Alu 1 299 -13 1223 209 61 36 chr17 32098511 32098870 -53339610 + L1ME2 LINE L1 5788 6155 -9 1636 169 0 60 chr17 32098880 32099194 -53339286 - AluJo SINE Alu -17 295 1 2220 112 0 0 chr17 32099216 32099512 -53338968 - AluSx SINE Alu -16 296 1 2324 81 3 0 chr17 32100016 32100330 -53338150 - AluSp SINE Alu 0 315 1 2257 84 7 7 chr17 32100532 32100830 -53337650 + AluSg SINE Alu 1 298 -12 234 313 0 61 chr17 32100886 32100985 -53337495 - MIR SINE MIR -58 150 58 228 67 0 0 chr17 32101064 32101094 -53337386 + (TA)n Simple_repeat Simple_repeat 2 31 0 22 0 0 0 chr17 32101774 32101796 -53336684 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr17 32101840 32101861 -53336619 + AT_rich Low_complexity Low_complexity 1 21 0 28 0 0 0 chr17 32101936 32101964 -53336516 + AT_rich Low_complexity Low_complexity 1 28 0 1872 151 31 7 chr17 32102315 32102606 -53335874 - AluSx SINE Alu -14 298 1 646 125 0 45 chr17 32103768 32103880 -53334600 + FLAM_C SINE Alu 23 129 -14 2385 106 0 0 chr17 32104561 32104873 -53333607 - AluSx SINE Alu 0 312 1 232 306 229 6 chr17 32109311 32109468 -53329012 + MIR SINE MIR 21 212 -50 21 36 0 0 chr17 32111181 32111209 -53327271 + AT_rich Low_complexity Low_complexity 1 28 0 2207 121 7 3 chr17 32113377 32113684 -53324796 - AluSx SINE Alu -4 308 1 907 128 0 15 chr17 32113804 32113937 -53324543 - FLAM_C SINE Alu 0 133 3 1615 69 178 32 chr17 32117542 32117789 -53320691 - AluY SINE Alu -18 283 1 971 192 43 32 chr17 32117821 32118083 -53320397 - L1ME LINE L1 -399 5755 5501 32 43 0 0 chr17 32118968 32119014 -53319466 + AT_rich Low_complexity Low_complexity 1 46 0 2576 64 0 3 chr17 32119408 32119719 -53318761 - AluY SINE Alu -1 310 1 24 67 0 0 chr17 32121116 32121161 -53317319 + AT_rich Low_complexity Low_complexity 1 45 0 331 110 14 55 chr17 32122203 32122276 -53316204 + L1MC5 LINE L1 7634 7703 -258 482 200 166 11 chr17 32122329 32122504 -53315976 + L1MC5 LINE L1 7709 7910 -51 1731 176 30 3 chr17 32122509 32122810 -53315670 - AluJb SINE Alu -3 309 1 261 0 0 0 chr17 32124034 32124063 -53314417 + (CA)n Simple_repeat Simple_repeat 1 29 0 2524 74 0 0 chr17 32126502 32126811 -53311669 + AluSc SINE Alu 1 309 0 1797 131 0 67 chr17 32127172 32127323 -53311157 + AluSx SINE Alu 1 122 -190 387 0 0 0 chr17 32127323 32127366 -53311114 + (TA)n Simple_repeat Simple_repeat 2 44 0 1797 131 0 67 chr17 32127366 32127528 -53310952 + AluSx SINE Alu 122 293 -19 27 29 0 0 chr17 32127718 32127752 -53310728 + AT_rich Low_complexity Low_complexity 1 34 0 198 281 158 0 chr17 32130008 32130090 -53308390 + MIR3 SINE MIR 110 204 -4 21 0 0 0 chr17 32132929 32132950 -53305530 + AT_rich Low_complexity Low_complexity 1 21 0 669 238 71 12 chr17 32133106 32133274 -53305206 - MIR SINE MIR -12 250 73 780 182 10 48 chr17 32133471 32133680 -53304800 - L1MD3 LINE L1 -24 7971 7771 2031 106 4 0 chr17 32133732 32133997 -53304483 + AluSx SINE Alu 1 266 -46 545 149 0 0 chr17 32133997 32134084 -53304396 + AluSg/x SINE Alu 219 305 -7 1889 94 0 65 chr17 32134122 32134398 -53304082 + AluSg SINE Alu 33 290 -20 263 183 150 17 chr17 32134425 32134485 -53303995 + MIR SINE MIR 93 160 -102 655 273 150 5 chr17 32134492 32134712 -53303768 - MIR SINE MIR 0 262 11 238 222 37 0 chr17 32134723 32134777 -53303703 + MIR SINE MIR 206 261 -1 2000 129 3 35 chr17 32134912 32135230 -53303250 + AluJb SINE Alu 1 308 -4 2080 139 0 7 chr17 32135374 32135676 -53302804 + AluJo SINE Alu 1 300 -12 479 300 0 50 chr17 32135892 32136032 -53302448 - MIR SINE MIR -108 154 22 1096 159 22 22 chr17 32137998 32138225 -53300255 - MSTB LTR MaLR 0 426 200 288 0 0 0 chr17 32138258 32138290 -53300190 + (T)n Simple_repeat Simple_repeat 1 32 0 947 114 126 0 chr17 32138906 32139081 -53299399 - MSTB LTR MaLR -229 197 1 21 36 0 0 chr17 32139813 32139841 -53298639 + AT_rich Low_complexity Low_complexity 1 28 0 4808 236 154 42 chr17 32140009 32141695 -53296785 + L2 LINE L2 258 2132 -1182 679 185 0 8 chr17 32141695 32141825 -53296655 + L1ME1 LINE L1 6033 6161 -5 527 158 53 9 chr17 32141865 32141979 -53296501 + L1MB7 LINE L1 6023 6141 -43 1642 131 39 11 chr17 32141990 32142250 -53296230 + AluSx SINE Alu 25 291 -21 1837 178 0 7 chr17 32142288 32142591 -53295889 - AluJo SINE Alu -11 301 1 21 0 0 0 chr17 32142593 32142614 -53295866 + AT_rich Low_complexity Low_complexity 1 21 0 253 253 36 12 chr17 32142761 32142844 -53295636 + L2 LINE L2 2123 2207 -1107 2156 256 70 58 chr17 32142999 32143458 -53295022 + L2 LINE L2 2230 2682 -631 2100 128 3 22 chr17 32143458 32143770 -53294710 + AluSx SINE Alu 1 306 -6 2156 256 70 58 chr17 32143770 32144371 -53294109 + L2 LINE L2 2682 3307 -6 2549 68 0 0 chr17 32144937 32145247 -53293233 + AluY SINE Alu 1 310 -1 232 304 18 0 chr17 32145725 32145781 -53292699 + MIR SINE MIR 39 95 -167 310 233 135 43 chr17 32145806 32145969 -53292511 - L1ME4a LINE L1 -21 6100 5923 24 0 0 0 chr17 32146073 32146097 -53292383 + AT_rich Low_complexity Low_complexity 1 24 0 360 249 163 58 chr17 32146194 32146451 -53292029 - L1ME4a LINE L1 -454 5667 5384 2238 109 0 3 chr17 32146493 32146795 -53291685 + AluSx SINE Alu 1 301 -11 1469 231 3 3 chr17 32146972 32147266 -53291214 - AluJo SINE Alu -18 294 1 383 260 31 52 chr17 32147279 32147471 -53291009 - L1ME4a LINE L1 -1519 4627 4440 2083 203 118 20 chr17 32147471 32147978 -53290502 - MER119 DNA MER1_type 0 583 27 207 241 56 0 chr17 32149076 32149130 -53289350 - MIR SINE MIR -74 188 132 1170 30 0 7 chr17 32149196 32149331 -53289149 + AluSc SINE Alu 1 134 -175 2354 61 7 0 chr17 32149331 32149626 -53288854 + AluY SINE Alu 1 297 -14 2397 100 0 0 chr17 32150210 32150519 -53287961 - AluSc SINE Alu 0 309 1 1747 162 3 48 chr17 32150523 32150738 -53287742 - AluJo SINE Alu -17 295 97 2210 119 0 0 chr17 32150738 32151032 -53287448 - AluSx SINE Alu -18 294 1 1747 162 3 48 chr17 32151032 32151125 -53287355 - AluJo SINE Alu -215 97 1 215 59 0 29 chr17 32151594 32151628 -53286852 + (TTCA)n Simple_repeat Simple_repeat 4 36 0 406 287 28 0 chr17 32151628 32151736 -53286744 - L2 LINE L2 -14 3299 3189 397 261 46 8 chr17 32152302 32152432 -53286048 + MIR SINE MIR 80 214 -48 637 188 9 0 chr17 32152441 32152553 -53285927 + FLAM_A SINE Alu 16 128 -14 210 132 57 0 chr17 32154547 32154600 -53283880 + CT-rich Low_complexity Low_complexity 2 57 0 193 179 0 30 chr17 32157530 32157597 -53280883 + GA-rich Low_complexity Low_complexity 1 65 0 24 53 0 0 chr17 32158047 32158085 -53280395 + AT_rich Low_complexity Low_complexity 1 38 0 893 253 0 15 chr17 32158088 32158286 -53280194 + MIR SINE MIR 17 211 -51 213 65 0 0 chr17 32159267 32159298 -53279182 + (A)n Simple_repeat Simple_repeat 1 31 0 2248 109 3 0 chr17 32159301 32159603 -53278877 + AluSq SINE Alu 1 303 -10 255 313 84 0 chr17 32159620 32159703 -53278777 + MIR SINE MIR 65 154 -108 709 148 47 54 chr17 32159734 32159883 -53278597 + AluJo SINE Alu 6 153 -159 22 70 0 0 chr17 32160905 32160948 -53277532 + AT_rich Low_complexity Low_complexity 1 43 0 22 0 0 0 chr17 32160989 32161011 -53277469 + AT_rich Low_complexity Low_complexity 1 22 0 449 329 93 9 chr17 32161072 32161288 -53277192 - L3 LINE CR1 -2 1575 1342 1107 35 0 21 chr17 32162209 32162353 -53276127 - L1PA4 LINE L1 0 6155 6015 265 304 32 40 chr17 32164113 32164238 -53274242 - L3b LINE CR1 -136 1447 1324 237 255 0 0 chr17 32164510 32164557 -53273923 - MIR SINE MIR -147 115 69 285 284 0 0 chr17 32164757 32164852 -53273628 - AluSp/q SINE Alu 0 303 209 927 269 60 3 chr17 32164939 32165222 -53273258 - AluSc SINE Alu 0 299 1 187 267 178 0 chr17 32167290 32167391 -53271089 - L2 LINE L2 -19 3294 3176 2253 199 109 16 chr17 32167630 32167861 -53270619 + L1ME1 LINE L1 5224 5432 -902 2342 93 0 10 chr17 32167861 32168171 -53270309 - AluSc SINE Alu -2 307 1 2253 199 109 16 chr17 32168171 32168773 -53269707 + L1ME1 LINE L1 5432 6331 -3 848 159 8 0 chr17 32168785 32168917 -53269563 + FLAM_C SINE Alu 1 133 0 275 322 17 9 chr17 32169783 32169898 -53268582 + CT-rich Low_complexity Low_complexity 1 116 0 25 0 0 0 chr17 32172290 32172315 -53266165 + AT_rich Low_complexity Low_complexity 1 25 0 35 24 0 0 chr17 32173966 32174008 -53264472 + AT_rich Low_complexity Low_complexity 1 42 0 35 24 0 0 chr17 32174052 32174094 -53264386 + AT_rich Low_complexity Low_complexity 1 42 0 717 94 0 9 chr17 32174134 32174240 -53264240 - AluSp/q SINE Alu 0 313 209 2304 78 55 0 chr17 32174317 32174610 -53263870 - AluSc SINE Alu 0 309 1 706 141 50 0 chr17 32180050 32180171 -53258309 - AluJb SINE Alu -22 290 164 2139 114 10 3 chr17 32181624 32181921 -53256559 + AluSq SINE Alu 1 299 -14 2453 87 3 3 chr17 32181996 32182307 -53256173 + AluSx SINE Alu 1 311 -1 369 0 0 0 chr17 32182546 32182587 -53255893 + (TG)n Simple_repeat Simple_repeat 2 42 0 517 256 30 32 chr17 32183308 32183541 -53254939 - MIR SINE MIR 0 262 32 1018 184 41 0 chr17 32183735 32183931 -53254549 - L1MB4 LINE L1 0 6180 5977 21 36 0 0 chr17 32184782 32184810 -53253670 + AT_rich Low_complexity Low_complexity 1 28 0 1728 152 16 55 chr17 32185889 32186198 -53252282 + AluJb SINE Alu 1 297 -15 207 229 165 46 chr17 32186275 32186384 -53252096 + MIR SINE MIR 117 238 -24 1480 204 41 3 chr17 32187622 32187916 -53250564 - AluJo SINE Alu -7 305 1 1378 153 22 0 chr17 32187963 32188186 -53250294 - AluJo SINE Alu 0 312 85 307 247 35 0 chr17 32188334 32188419 -53250061 - L2 LINE L2 0 3313 3226 552 205 102 98 chr17 32189649 32189864 -53248616 + MIR SINE MIR 26 241 -21 321 26 0 0 chr17 32190088 32190126 -53248354 + (TAGA)n Simple_repeat Simple_repeat 2 39 0 234 222 0 0 chr17 32192052 32192106 -53246374 + T-rich Low_complexity Low_complexity 1 54 0 211 297 99 22 chr17 32192723 32192814 -53245666 + MIR SINE MIR 95 192 -70 194 311 126 8 chr17 32193124 32193243 -53245237 - MIR3 SINE MIR -63 145 13 2387 81 3 0 chr17 32193490 32193785 -53244695 + AluSp SINE Alu 3 298 -15 2420 100 3 0 chr17 32196283 32196592 -53241888 - AluSp SINE Alu -2 311 2 1157 110 0 0 chr17 32196683 32196837 -53241643 - AluSg/x SINE Alu -14 296 143 1533 179 16 26 chr17 32197209 32197516 -53240964 - AluJb SINE Alu -8 304 1 591 235 221 5 chr17 32197632 32197836 -53240644 + MIR SINE MIR 15 262 0 1246 92 179 5 chr17 32197958 32198154 -53240326 - MER30 DNA MER1_type 0 230 1 1486 140 23 45 chr17 32198155 32198420 -53240060 - AluJo SINE Alu -52 260 2 303 49 0 0 chr17 32198424 32198465 -53240015 + (TG)n Simple_repeat Simple_repeat 2 42 0 412 200 0 0 chr17 32198465 32198535 -53239945 - FLAM SINE Alu -16 117 48 24 32 0 0 chr17 32199076 32199107 -53239373 + AT_rich Low_complexity Low_complexity 1 31 0 339 234 35 113 chr17 32199600 32199674 -53238806 + MIR SINE MIR 14 73 -189 2281 106 10 0 chr17 32199674 32199976 -53238504 + AluSx SINE Alu 1 305 -7 339 234 35 113 chr17 32199976 32200042 -53238438 + MIR SINE MIR 73 143 -119 888 218 63 0 chr17 32200591 32200797 -53237683 + MIR SINE MIR 11 229 -33 4017 205 67 58 chr17 32200873 32201070 -53237410 - L1MC4 LINE L1 -5 8037 7843 2000 141 41 0 chr17 32201070 32201361 -53237119 - AluSx SINE Alu -9 303 1 4017 205 67 58 chr17 32201361 32202396 -53236084 - L1MC4 LINE L1 -199 7843 6794 247 253 0 79 chr17 32202459 32202649 -53235831 + CT-rich Low_complexity Low_complexity 1 175 0 429 356 7 0 chr17 32205393 32205528 -53232952 - L2 LINE L2 0 3272 3137 471 283 110 32 chr17 32205732 32206040 -53232440 - L2 LINE L2 -340 2974 2643 362 177 94 0 chr17 32206330 32206426 -53232054 + Charlie7 DNA MER1_type 51 155 -2457 364 253 148 44 chr17 32208245 32208378 -53230102 + MIR SINE MIR 56 214 -48 1890 170 0 0 chr17 32208378 32208672 -53229808 + AluJo SINE Alu 1 294 -18 364 253 148 44 chr17 32208672 32208720 -53229760 + MIR SINE MIR 214 256 -6 1454 160 73 24 chr17 32209882 32210170 -53228310 - AluJb SINE Alu -10 302 1 1784 177 14 0 chr17 32210300 32210594 -53227886 + AluJo SINE Alu 1 298 -14 743 206 37 102 chr17 32213672 32213997 -53224483 - L1MC4 LINE L1 -2 8040 7737 837 231 124 7 chr17 32213999 32214272 -53224208 - L1MC4 LINE L1 -503 7539 7235 1976 122 24 10 chr17 32217847 32218142 -53220338 + AluSc SINE Alu 1 299 -10 245 237 254 65 chr17 32219918 32220087 -53218393 + MIR SINE MIR 10 210 -52 263 216 0 0 chr17 32220395 32220446 -53218034 + MIR3 SINE MIR 135 185 -23 1977 107 48 0 chr17 32220992 32221283 -53217197 + AluSx SINE Alu 1 305 -7 195 42 0 0 chr17 32221366 32221390 -53217090 + (A)n Simple_repeat Simple_repeat 1 24 0 1684 160 0 39 chr17 32221392 32221704 -53216776 + AluJb SINE Alu 1 300 -12 1905 126 8 62 chr17 32221713 32221906 -53216574 + L1MB3 LINE L1 5820 5987 -196 1726 144 0 69 chr17 32221906 32222212 -53216268 - AluJo SINE Alu -18 294 10 1905 126 8 62 chr17 32222212 32222374 -53216106 + L1MB3 LINE L1 5987 6156 -27 2009 250 76 24 chr17 32222400 32223254 -53215226 + L1ME1 LINE L1 1080 2132 -4431 1354 176 50 56 chr17 32223298 32223352 -53215128 + L1MB2 LINE L1 5254 5307 -864 2109 112 0 0 chr17 32223352 32223646 -53214834 - AluSx SINE Alu -18 294 1 1354 176 50 56 chr17 32223646 32223672 -53214808 + L1MB2 LINE L1 5307 5332 -839 1706 160 7 10 chr17 32223672 32223965 -53214515 + AluJb SINE Alu 1 292 -20 1354 176 50 56 chr17 32223965 32224240 -53214240 + L1MB2 LINE L1 5332 5608 -563 978 154 85 40 chr17 32224240 32224441 -53214039 + AluJo SINE Alu 1 210 -102 725 146 0 0 chr17 32224498 32224601 -53213879 + FRAM SINE Alu 41 143 -33 3272 126 33 28 chr17 32224601 32224958 -53213522 + L1MB2 LINE L1 5590 5953 -218 2081 116 17 0 chr17 32224958 32225260 -53213220 + AluSx SINE Alu 2 308 -4 3272 126 33 28 chr17 32225260 32225474 -53213006 + L1MB2 LINE L1 5953 6164 -7 21 0 0 0 chr17 32225489 32225510 -53212970 + AT_rich Low_complexity Low_complexity 1 21 0 1314 167 144 19 chr17 32225519 32225782 -53212698 + AluJo SINE Alu 1 296 -6 404 152 25 0 chr17 32225808 32225887 -53212593 + L1ME1 LINE L1 2364 2444 -3938 1748 147 0 43 chr17 32225891 32226217 -53212263 + AluJo SINE Alu 1 312 0 564 148 11 0 chr17 32226226 32226314 -53212166 - AluJo SINE Alu -119 193 105 833 239 31 41 chr17 32226322 32226615 -53211865 + L1ME1 LINE L1 2469 2758 -3624 4578 209 50 82 chr17 32226635 32226807 -53211673 + L1ME1 LINE L1 3295 3471 -2911 2314 94 0 0 chr17 32226807 32227116 -53211364 + AluSc SINE Alu 1 309 0 4578 209 50 82 chr17 32227116 32227382 -53211098 + L1ME1 LINE L1 3471 3744 -2638 2023 128 0 0 chr17 32227382 32227680 -53210800 + AluSx SINE Alu 1 298 -14 4578 209 50 82 chr17 32227680 32227756 -53210724 + L1ME1 LINE L1 3744 3821 -2561 2289 95 0 0 chr17 32227756 32228062 -53210418 + AluSg SINE Alu 1 306 -4 4578 209 50 82 chr17 32228062 32228234 -53210246 + L1ME1 LINE L1 3821 3997 -2385 942 214 12 0 chr17 32228234 32228402 -53210078 + FAM SINE Alu 1 170 -5 4578 209 50 82 chr17 32228402 32228436 -53210044 + L1ME1 LINE L1 3997 4031 -2351 1771 132 35 7 chr17 32228436 32228723 -53209757 - AluSx SINE Alu -12 300 6 4578 209 50 82 chr17 32228723 32228780 -53209700 + L1ME1 LINE L1 4031 4088 -2294 2424 78 12 27 chr17 32228780 32229115 -53209365 - L1PA8A LINE L1 -9 6122 5793 4578 209 50 82 chr17 32229115 32229137 -53209343 + L1ME1 LINE L1 4088 4109 -2273 1496 140 39 60 chr17 32229137 32229270 -53209210 + AluJb SINE Alu 17 151 -161 1860 151 7 3 chr17 32229270 32229574 -53208906 + AluSx SINE Alu 1 305 -7 1496 140 39 60 chr17 32229574 32229725 -53208755 + AluJb SINE Alu 151 295 -17 4578 209 50 82 chr17 32229725 32229930 -53208550 + L1ME1 LINE L1 4109 4319 -2063 1937 110 13 20 chr17 32229930 32230231 -53208249 + AluSx SINE Alu 2 300 -12 4578 209 50 82 chr17 32230231 32230850 -53207630 + L1ME1 LINE L1 4319 4873 -1509 1607 154 0 4 chr17 32230852 32231112 -53207368 + AluJo SINE Alu 1 259 -53 3275 210 87 20 chr17 32231566 32232081 -53206399 + L1ME1 LINE L1 4875 5354 -1048 2181 87 30 0 chr17 32232081 32232381 -53206099 + AluSc SINE Alu 1 309 0 3275 210 87 20 chr17 32232381 32233294 -53205186 + L1ME1 LINE L1 5354 6399 -3 1975 124 7 0 chr17 32233314 32233597 -53204883 + AluSx SINE Alu 1 285 -27 433 178 93 56 chr17 32236769 32236876 -53201604 - MER3 DNA MER1_type -98 111 1 208 188 62 0 chr17 32237408 32237456 -53201024 + L2 LINE L2 3262 3312 -1 184 261 204 23 chr17 32237524 32237612 -53200868 - MIR3 SINE MIR -21 187 84 1726 130 3 60 chr17 32238494 32238810 -53199670 - AluJo SINE Alu -14 298 1 1735 117 23 0 chr17 32238834 32239099 -53199381 + AluSx SINE Alu 42 312 0 256 244 29 107 chr17 32240127 32240332 -53198148 + L1ME LINE L1 5585 5773 -348 1952 136 3 0 chr17 32240667 32240968 -53197512 + AluJb SINE Alu 1 302 -10 2071 126 0 7 chr17 32242125 32242426 -53196054 + AluSx SINE Alu 1 299 -13 848 136 0 58 chr17 32242915 32243070 -53195410 + AluJb SINE Alu 137 282 -30 328 74 0 56 chr17 32243114 32243168 -53195312 - MER66A LTR ERV1 -141 337 287 2032 116 27 0 chr17 32243234 32243535 -53194945 - AluSx SINE Alu -3 309 1 2138 160 52 40 chr17 32243555 32243780 -53194700 - L1MA7 LINE L1 -3 6288 6067 1684 120 0 19 chr17 32243780 32244038 -53194442 + AluSq SINE Alu 1 253 -60 291 71 0 0 chr17 32244042 32244084 -53194396 + (TAAA)n Simple_repeat Simple_repeat 1 42 0 2138 160 52 40 chr17 32244084 32244333 -53194147 - L1MA7 LINE L1 -226 6065 5803 1416 203 35 140 chr17 32244343 32244507 -53193973 + L1M1 LINE L1 5268 5448 -857 2250 103 0 0 chr17 32244507 32244817 -53193663 + AluSg SINE Alu 1 310 0 1416 203 35 140 chr17 32244817 32245224 -53193256 + L1M1 LINE L1 5448 5779 -526 2696 215 77 67 chr17 32248183 32248341 -53190139 - Charlie2 DNA MER1_type -65 2797 2642 2222 62 4 0 chr17 32248341 32248617 -53189863 - AluSc SINE Alu -21 288 12 2696 215 77 67 chr17 32248617 32249397 -53189083 - Charlie2 DNA MER1_type -220 2642 1850 537 267 144 44 chr17 32249381 32249651 -53188829 - Charlie2 DNA MER1_type -2451 331 35 * 345 102 0 0 chr17 32250480 32250539 -53187941 + (TG)n Simple_repeat Simple_repeat 2 60 0 823 146 31 0 chr17 32251146 32251276 -53187204 + AluJo SINE Alu 1 134 -178 675 305 138 16 chr17 32251956 32252333 -53186147 - L3 LINE CR1 -156 1421 999 2400 47 0 10 chr17 32252595 32252896 -53185584 - AluY SINE Alu -13 298 1 391 265 31 0 chr17 32253042 32253140 -53185340 + MIR SINE MIR 51 151 -111 2253 106 0 0 chr17 32253546 32253858 -53184622 + AluSx SINE Alu 1 312 0 22 0 0 0 chr17 32255118 32255140 -53183340 + AT_rich Low_complexity Low_complexity 1 22 0 405 58 0 0 chr17 32255434 32255486 -53182994 + (TG)n Simple_repeat Simple_repeat 2 53 0 1159 196 26 18 chr17 32257340 32257569 -53180911 + MER46A DNA MER2_type 6 236 0 2417 81 0 0 chr17 32259177 32259487 -53178993 + AluY SINE Alu 2 311 0 1847 142 0 35 chr17 32259496 32259814 -53178666 + AluJo SINE Alu 1 307 -5 322 258 131 79 chr17 32259892 32260320 -53178160 + L1ME4a LINE L1 5003 5461 -769 2193 106 3 0 chr17 32260412 32260715 -53177765 + AluSx SINE Alu 1 304 -8 315 218 248 10 chr17 32260776 32261079 -53177401 + L1ME4a LINE L1 5572 5946 -175 312 187 0 13 chr17 32261143 32261218 -53177262 + L1ME4a LINE L1 6048 6121 0 661 295 58 10 chr17 32261613 32261820 -53176660 + MIR SINE MIR 34 250 -12 22 0 0 0 chr17 32262109 32262131 -53176349 + AT_rich Low_complexity Low_complexity 1 22 0 2763 126 12 12 chr17 32264082 32264510 -53173970 - MSTA LTR MaLR 0 428 1 414 189 0 0 chr17 32264530 32264620 -53173860 - L1MA4A LINE L1 -2 6301 6212 2045 100 0 29 chr17 32264903 32265213 -53173267 + AluSc SINE Alu 1 301 -8 923 190 0 6 chr17 32266122 32266296 -53172184 + FRAM SINE Alu 1 166 -10 848 113 5 5 chr17 32266472 32266676 -53171804 + AluSx SINE Alu 2 295 -15 257 327 33 40 chr17 32266677 32266827 -53171653 - L1ME LINE L1 -527 5594 5446 1125 117 0 0 chr17 32266840 32267003 -53171477 + AluSg/x SINE Alu 140 302 -8 309 299 121 42 chr17 32267003 32267069 -53171411 - L1ME LINE L1 -682 5439 5380 2435 62 3 0 chr17 32267069 32267374 -53171106 - AluY SINE Alu -5 306 1 309 299 121 42 chr17 32267374 32267659 -53170821 - L1ME LINE L1 -741 5380 5055 589 228 114 64 chr17 32268226 32268445 -53170035 + MLT1L LTR MaLR 165 394 -221 258 260 149 0 chr17 32269297 32269451 -53169029 + L1ME LINE L1 5684 5860 -261 1904 177 87 18 chr17 32269573 32270020 -53168460 + L1MC4 LINE L1 6671 7148 -894 1975 141 26 18 chr17 32270775 32271116 -53167364 + MER2 DNA MER2_type 1 344 0 24 0 0 0 chr17 32271883 32271907 -53166573 + AT_rich Low_complexity Low_complexity 1 24 0 804 168 0 0 chr17 32272007 32272126 -53166354 + FLAM_C SINE Alu 1 119 -24 1367 127 8 99 chr17 32272217 32272351 -53166129 + AluJo SINE Alu 1 146 -166 2138 123 7 3 chr17 32272351 32272659 -53165821 + AluSx SINE Alu 1 309 -3 1367 127 8 99 chr17 32272659 32272670 -53165810 + AluJo SINE Alu 146 156 -156 2259 112 0 13 chr17 32272670 32272983 -53165497 + AluSx SINE Alu 1 309 -3 1367 127 8 99 chr17 32272983 32273089 -53165391 + AluJo SINE Alu 156 230 -82 322 140 0 18 chr17 32273094 32273151 -53165329 - AluJ/FRAM SINE Alu -27 275 220 1767 178 7 0 chr17 32273411 32273714 -53164766 - AluJb SINE Alu -7 305 1 1785 149 3 70 chr17 32273773 32274088 -53164392 - AluJb SINE Alu -18 294 1 231 310 81 0 chr17 32274095 32274182 -53164298 - L1MC/D LINE L1 -2165 5643 5550 22 56 0 0 chr17 32274190 32274226 -53164254 + AT_rich Low_complexity Low_complexity 1 36 0 1207 192 48 16 chr17 32274379 32274692 -53163788 + MER33 DNA MER1_type 2 324 0 328 271 71 0 chr17 32275459 32275544 -53162936 + MIR SINE MIR 13 103 -159 * 898 249 28 23 chr17 32275517 32275734 -53162746 - MIR SINE MIR -25 237 20 2042 187 56 6 chr17 32275957 32276454 -53162026 - L1MC4a LINE L1 -228 7580 7059 2205 119 0 0 chr17 32277248 32277541 -53160939 - AluSx SINE Alu -19 293 1 245 288 34 0 chr17 32277753 32277812 -53160668 + MIR SINE MIR 13 73 -189 1594 161 37 68 chr17 32278074 32278428 -53160052 - MER2 DNA MER2_type -1 343 1 503 314 147 5 chr17 32278952 32279156 -53159324 - MIR SINE MIR -10 252 20 1006 219 32 16 chr17 32279420 32279667 -53158813 - MIR SINE MIR 0 262 12 372 341 46 17 chr17 32279818 32279991 -53158489 + L3b LINE CR1 1359 1536 -47 333 0 0 0 chr17 32280095 32280132 -53158348 + (CA)n Simple_repeat Simple_repeat 1 37 0 33 60 0 24 chr17 32280393 32280421 -53158059 + AT_rich Low_complexity Low_complexity 1 28 -53 1547 6 0 0 chr17 32280421 32280590 -53157890 - AluY SINE Alu -10 301 133 2218 126 0 0 chr17 32280590 32280899 -53157581 - AluSx SINE Alu -3 309 1 33 60 0 24 chr17 32280899 32280952 -53157528 + AT_rich Low_complexity Low_complexity 26 81 0 521 177 50 96 chr17 32281844 32282064 -53156416 - L1MC5 LINE L1 -212 7749 7540 21 36 0 0 chr17 32282438 32282466 -53156014 + AT_rich Low_complexity Low_complexity 1 28 0 287 239 128 0 chr17 32285950 32286059 -53152421 + HAL1 LINE L1 7 129 -2378 282 299 112 72 chr17 32286251 32286529 -53151951 + HAL1 LINE L1 387 675 -1832 1213 193 13 81 chr17 32286570 32286953 -53151527 + MLT1A1 LTR MaLR 1 357 -8 774 223 156 80 chr17 32287048 32287697 -53150783 + HAL1 LINE L1 765 1484 -1023 421 220 127 17 chr17 32287697 32287815 -53150665 - MER94 DNA DNA -3 131 1 774 223 156 80 chr17 32287815 32287942 -53150538 + HAL1 LINE L1 1484 1600 -907 471 127 28 0 chr17 32287942 32288052 -53150428 - AluSg/x SINE Alu 0 318 207 455 247 151 27 chr17 32288078 32288503 -53149977 + HAL1 LINE L1 1618 2118 -389 2001 165 80 8 chr17 32288503 32288904 -53149576 + MSTB1 LTR MaLR 3 432 0 455 247 151 27 chr17 32288904 32288947 -53149533 + HAL1 LINE L1 2118 2154 -353 2459 132 68 15 chr17 32288952 32289527 -53148953 - L1M4 LINE L1 -705 5469 4856 2001 110 24 10 chr17 32289893 32290185 -53148295 + AluSx SINE Alu 1 296 -16 257 307 83 51 chr17 32290344 32290598 -53147882 + L2 LINE L2 1807 2068 -1246 293 212 222 48 chr17 32290652 32290841 -53147639 + L2 LINE L2 2380 2601 -713 2214 96 0 13 chr17 32290856 32291157 -53147323 - AluSx SINE Alu -15 297 1 185 319 97 65 chr17 32291337 32291720 -53146760 + L2 LINE L2 2815 3209 -63 931 46 0 0 chr17 32291781 32291889 -53146591 - AluY SINE Alu -23 288 181 384 145 0 0 chr17 32291989 32292051 -53146429 + Alu SINE Alu 236 297 -5 2144 100 0 0 chr17 32292625 32292905 -53145575 - AluSg SINE Alu -30 280 1 225 0 0 0 chr17 32293515 32293540 -53144940 + (A)n Simple_repeat Simple_repeat 1 25 0 475 115 23 46 chr17 32293540 32293627 -53144853 + L2 LINE L2 1881 1965 -1349 5214 184 28 40 chr17 32293627 32294329 -53144151 - L1M4 LINE L1 -1078 5068 4359 2219 74 13 33 chr17 32294329 32294628 -53143852 - AluY SINE Alu -18 293 1 5214 184 28 40 chr17 32294628 32294792 -53143688 - L1M4 LINE L1 -1787 4359 4195 2193 106 3 3 chr17 32294792 32295094 -53143386 - AluSx SINE Alu -10 302 1 5214 184 28 40 chr17 32295094 32295539 -53142941 - L1M4 LINE L1 -1951 4195 3772 226 152 22 22 chr17 32295540 32295586 -53142894 + CT-rich Low_complexity Low_complexity 3 48 0 293 115 0 0 chr17 32295688 32295740 -53142740 + AluSc SINE Alu 248 299 0 810 254 33 39 chr17 32295757 32296015 -53142465 + L1M4 LINE L1 3243 3500 -2646 2133 130 0 0 chr17 32296015 32296314 -53142166 + AluSx SINE Alu 1 299 -13 810 254 33 39 chr17 32296314 32296390 -53142090 + L1M4 LINE L1 3500 3575 -2571 2247 112 0 3 chr17 32296390 32296702 -53141778 + AluY SINE Alu 1 311 0 1958 145 0 35 chr17 32296711 32297029 -53141451 + AluJo SINE Alu 1 307 -5 2292 106 3 0 chr17 32297627 32297930 -53140550 + AluSx SINE Alu 1 304 -8 305 272 112 12 chr17 32297991 32298160 -53140320 + L1ME LINE L1 5572 5757 -364 1665 171 4 11 chr17 32298319 32298583 -53139897 + AluJb SINE Alu 7 268 -44 21 71 0 0 chr17 32298583 32298625 -53139855 + AT_rich Low_complexity Low_complexity 1 42 0 5588 116 14 1 chr17 32299470 32300396 -53138084 + L1PB1 LINE L1 5215 6150 -1 372 331 50 22 chr17 32300418 32300599 -53137881 - MIR3 SINE MIR -5 203 18 805 183 0 0 chr17 32300771 32300902 -53137578 + FLAM_C SINE Alu 3 133 0 3140 219 49 94 chr17 32301451 32301514 -53136966 - L2 LINE L2 -1 3312 3248 933 176 49 29 chr17 32301514 32301719 -53136761 - MER3 DNA MER1_type 0 209 1 3140 219 49 94 chr17 32301719 32303017 -53135463 - L2 LINE L2 -65 3248 1996 620 163 10 0 chr17 32303017 32303115 -53135365 + FRAM SINE Alu 48 146 -30 1723 174 0 4 chr17 32303200 32303476 -53135004 + AluJo SINE Alu 1 275 -37 309 109 47 0 chr17 32303482 32303546 -53134934 + GA-rich Low_complexity Low_complexity 2 68 0 1853 65 0 73 chr17 32303651 32303926 -53134554 + AluSq SINE Alu 59 313 0 1331 192 63 4 chr17 32304185 32304456 -53134024 - AluJo SINE Alu -25 287 1 620 241 126 11 chr17 32304627 32304818 -53133662 + MIR SINE MIR 36 248 -14 264 342 90 67 chr17 32305128 32305529 -53132951 + L2 LINE L2 2848 3257 -15 1469 205 0 53 chr17 32305534 32305836 -53132644 + AluJo SINE Alu 1 286 -26 2189 112 3 0 chr17 32306556 32306850 -53131630 - AluSp SINE Alu -18 295 1 1917 160 0 29 chr17 32306884 32307191 -53131289 - AluJo SINE Alu -13 299 2 674 270 9 26 chr17 32307557 32307787 -53130693 + L2 LINE L2 874 1099 -2215 1123 181 75 31 chr17 32307798 32308091 -53130389 - MER46C DNA MER2_type -25 313 8 1394 226 239 20 chr17 32308091 32308701 -53129779 + L2 LINE L2 1090 1833 -1481 2240 75 14 4 chr17 32308702 32308980 -53129500 - AluSq SINE Alu -22 291 11 1391 159 0 9 chr17 32308990 32309217 -53129263 - AluSx SINE Alu -87 225 1 2087 156 0 0 chr17 32309534 32309842 -53128638 + AluJo SINE Alu 1 308 -4 273 330 57 0 chr17 32311180 32311286 -53127194 + MIR SINE MIR 20 131 -77 204 231 0 0 chr17 32311353 32311405 -53127075 + (CATA)n Simple_repeat Simple_repeat 4 55 0 207 300 0 29 chr17 32312086 32312156 -53126324 + GA-rich Low_complexity Low_complexity 1 68 0 2499 61 0 0 chr17 32313517 32313814 -53124666 + AluY SINE Alu 1 297 -14 429 219 107 11 chr17 32314726 32314904 -53123576 + L1ME4a LINE L1 5260 5454 -2354 404 244 137 28 chr17 32314913 32315198 -53123282 + L1ME4a LINE L1 5548 5868 -268 2065 116 10 14 chr17 32317078 32317371 -53121109 - AluSx SINE Alu -20 292 1 1802 172 0 10 chr17 32318111 32318407 -53120073 + AluJo SINE Alu 1 293 -19 519 252 8 8 chr17 32318943 32319066 -53119414 + MIR SINE MIR 138 260 -2 2061 110 0 23 chr17 32319555 32319863 -53118617 + AluSg SINE Alu 1 301 -9 1208 135 0 81 chr17 32319873 32320132 -53118348 + AluJo SINE Alu 54 291 -21 1336 196 7 37 chr17 32320160 32320202 -53118278 + AluJo SINE Alu 1 43 -269 2203 107 0 0 chr17 32320202 32320502 -53117978 + AluSx SINE Alu 1 300 -12 1336 196 7 37 chr17 32320502 32320755 -53117725 + AluJo SINE Alu 43 287 -25 184 330 34 45 chr17 32320833 32321009 -53117471 + L2 LINE L2 2213 2386 -928 2134 109 0 10 chr17 32321755 32322057 -53116423 + AluSx SINE Alu 3 301 -11 1643 182 0 25 chr17 32322061 32322380 -53116100 + AluJo SINE Alu 1 311 -1 1850 134 43 0 chr17 32322417 32322722 -53115758 + L1MB3 LINE L1 5866 6183 0 1968 136 3 0 chr17 32322752 32323061 -53115419 + AluY SINE Alu 1 310 -1 195 146 0 0 chr17 32323154 32323195 -53115285 + (A)n Simple_repeat Simple_repeat 1 41 0 2317 106 33 3 chr17 32323196 32323563 -53114917 + L1MB2 LINE L1 5792 6169 -2 735 176 8 0 chr17 32323578 32323790 -53114690 + FLAM_C SINE Alu 12 224 0 1100 150 0 0 chr17 32323790 32323963 -53114517 + AluJo/FRAM SINE Alu 131 303 -9 625 171 25 25 chr17 32324656 32324813 -53113667 + L1MC5 LINE L1 7772 7986 -9 2129 121 0 13 chr17 32324926 32325240 -53113240 + AluSg SINE Alu 1 310 0 562 214 258 11 chr17 32326048 32326230 -53112250 - MIR SINE MIR -2 260 34 1840 167 3 6 chr17 32326384 32326696 -53111784 - AluSq SINE Alu -2 311 1 2290 91 0 0 chr17 32326702 32327000 -53111480 - AluSq SINE Alu -15 298 1 1809 146 0 7 chr17 32327336 32327624 -53110856 + AluJo SINE Alu 11 296 -16 22 56 0 0 chr17 32327676 32327712 -53110768 + AT_rich Low_complexity Low_complexity 1 36 0 237 359 87 10 chr17 32328144 32328247 -53110233 + L3b LINE CR1 1473 1583 0 375 135 0 0 chr17 32328314 32328366 -53110114 + Alu SINE Alu 2 53 -255 185 185 15 0 chr17 32328373 32328438 -53110042 + (TA)n Simple_repeat Simple_repeat 2 67 0 456 317 102 32 chr17 32328568 32328754 -53109726 + MIR3 SINE MIR 3 201 -7 1535 155 16 63 chr17 32329009 32329326 -53109154 + AluJo SINE Alu 1 302 -10 369 304 55 65 chr17 32330698 32330915 -53107565 + MIR SINE MIR 2 216 -46 213 288 0 0 chr17 32332283 32332342 -53106138 + (TATATG)n Simple_repeat Simple_repeat 4 62 0 32 43 0 0 chr17 32333342 32333388 -53105092 + AT_rich Low_complexity Low_complexity 1 46 0 183 207 0 0 chr17 32334292 32334321 -53104159 + L2 LINE L2 3154 3182 -90 655 230 7 20 chr17 32334563 32334711 -53103769 - MIR SINE MIR -2 260 115 21 0 0 0 chr17 32335096 32335117 -53103363 + AT_rich Low_complexity Low_complexity 1 21 0 712 306 72 3 chr17 32335147 32335467 -53103013 + L1ME LINE L1 5482 5823 -298 274 274 53 0 chr17 32335600 32335695 -53102785 + L1MC4 LINE L1 7803 7902 -140 1360 271 65 57 chr17 32336183 32336879 -53101601 + L1ME4a LINE L1 5347 6051 -70 2150 114 7 0 chr17 32336879 32337187 -53101293 - AluSx SINE Alu -2 310 1 1360 271 65 57 chr17 32337187 32337258 -53101222 + L1ME4a LINE L1 6051 6120 -1 199 285 9 103 chr17 32337562 32337679 -53100801 + MIR SINE MIR 4 108 -100 231 114 0 0 chr17 32337833 32337868 -53100612 + (GAAA)n Simple_repeat Simple_repeat 2 36 0 3286 202 60 37 chr17 32339058 32340146 -53098334 - L1ME1 LINE L1 -148 6018 4910 1424 187 47 7 chr17 32340146 32340446 -53098034 + AluJo SINE Alu 1 312 0 3286 202 60 37 chr17 32340446 32340561 -53097919 - L1ME1 LINE L1 -1256 4910 4799 2721 194 102 14 chr17 32340664 32341319 -53097161 + L1ME1 LINE L1 5449 6161 -5 * 4604 243 148 38 chr17 32341312 32342049 -53096431 + HAL1 LINE L1 142 797 -1710 1693 174 7 26 chr17 32342049 32342359 -53096121 + AluJo SINE Alu 1 304 -8 198 0 0 0 chr17 32342366 32342388 -53096092 + (TAAAA)n Simple_repeat Simple_repeat 4 25 0 4604 243 148 38 chr17 32342388 32342408 -53096072 + HAL1 LINE L1 802 818 -1689 1635 175 27 3 chr17 32342408 32342705 -53095775 + AluJb SINE Alu 8 311 -1 4604 243 148 38 chr17 32342705 32344066 -53094414 + HAL1 LINE L1 818 2503 -4 831 94 0 17 chr17 32344076 32344193 -53094287 + AluJb SINE Alu 5 119 -193 242 239 67 112 chr17 32344341 32344412 -53094068 + HAL1 LINE L1 1033 1106 -1401 1785 159 0 10 chr17 32344412 32344707 -53093773 + AluJo SINE Alu 5 296 -16 242 239 67 112 chr17 32344707 32345053 -53093427 + HAL1 LINE L1 1106 1431 -1076 1145 165 4 30 chr17 32345053 32345283 -53093197 + AluJo SINE Alu 86 309 -3 506 204 61 66 chr17 32345285 32345399 -53093081 + HAL1 LINE L1 1425 1539 -968 2165 143 135 29 chr17 32345399 32345852 -53092628 + MLT1D LTR MaLR 3 503 -2 506 204 61 66 chr17 32345852 32345918 -53092562 + HAL1 LINE L1 1539 1604 -903 947 157 13 0 chr17 32346334 32346493 -53091987 - AluSg/x SINE Alu -9 301 141 1174 197 49 131 chr17 32346498 32346849 -53091631 + L2 LINE L2 1520 1821 -1493 820 138 0 0 chr17 32346849 32346965 -53091515 - FLAM_C SINE Alu -17 116 1 1174 197 49 131 chr17 32346965 32347101 -53091379 + L2 LINE L2 1821 1967 -1347 1985 91 29 4 chr17 32347721 32348020 -53090460 - AluSq SINE Alu 0 306 1 307 102 51 51 chr17 32348219 32348278 -53090202 + MER66A LTR ERV1 279 337 -141 350 243 64 103 chr17 32348735 32348885 -53089595 + L1ME LINE L1 5457 5601 -520 2067 113 0 7 chr17 32348885 32349185 -53089295 + AluSq SINE Alu 1 298 -15 350 243 64 103 chr17 32349185 32349228 -53089252 + L1ME LINE L1 5601 5644 -477 1588 150 51 2 chr17 32349231 32349543 -53088937 + MER33 DNA MER1_type 1 323 -1 232 330 11 0 chr17 32349559 32349650 -53088830 + L1P4 LINE L1 5674 5765 -396 746 264 22 11 chr17 32349910 32350092 -53088388 + MIR SINE MIR 21 204 -58 21 0 0 0 chr17 32350137 32350158 -53088322 + AT_rich Low_complexity Low_complexity 1 21 0 234 167 0 0 chr17 32350209 32350245 -53088235 + L2 LINE L2 3262 3297 -16 196 258 197 15 chr17 32350782 32350848 -53087632 + MIR3 SINE MIR 103 180 -28 1540 74 5 0 chr17 32350889 32351092 -53087388 + AluSp SINE Alu 88 291 -22 400 306 150 81 chr17 32351411 32351830 -53086650 - L3 LINE CR1 -9 1568 1121 351 311 106 0 chr17 32353441 32353573 -53084907 - L2 LINE L2 -2 3270 3125 207 176 0 0 chr17 32357761 32357795 -53080685 + (TG)n Simple_repeat Simple_repeat 2 35 0 25 0 0 0 chr17 32358884 32358909 -53079571 + GC_rich Low_complexity Low_complexity 1 25 0 194 88 0 29 chr17 32361322 32361356 -53077124 + (TGGGGG)n Simple_repeat Simple_repeat 2 34 0 254 325 8 16 chr17 32361368 32361491 -53076989 + GA-rich Low_complexity Low_complexity 2 123 0 27 49 0 0 chr17 32364970 32365011 -53073469 + GC_rich Low_complexity Low_complexity 1 41 0 21 0 0 0 chr17 32365469 32365490 -53072990 + GC_rich Low_complexity Low_complexity 1 21 0 236 164 36 18 chr17 32368926 32368981 -53069499 + G-rich Low_complexity Low_complexity 3 58 0 544 207 0 9 chr17 32372228 32372339 -53066141 + MIR3 SINE MIR 87 196 -12 21 57 0 0 chr17 32373083 32373118 -53065362 + AT_rich Low_complexity Low_complexity 1 35 0 360 133 0 0 chr17 32373651 32373711 -53064769 + (TG)n Simple_repeat Simple_repeat 2 61 0 816 140 0 22 chr17 32374214 32374350 -53064130 + FLAM_C SINE Alu 1 133 0 707 169 7 35 chr17 32374805 32374947 -53063533 + AluSg/x SINE Alu 173 310 0 295 275 83 50 chr17 32376479 32376599 -53061881 + MIR SINE MIR 18 141 -67 1715 168 91 3 chr17 32376610 32376896 -53061584 + AluSq SINE Alu 1 311 -2 833 183 6 28 chr17 32376912 32377092 -53061388 + MER5B DNA MER1_type 3 178 0 565 273 10 5 chr17 32379108 32379303 -53059177 - MIR SINE MIR -30 232 37 1771 159 50 0 chr17 32379450 32379733 -53058747 - AluJo SINE Alu -13 299 3 231 298 3 0 chr17 32379856 32379925 -53058555 + MIR SINE MIR 58 129 -79 373 295 16 38 chr17 32380908 32381091 -53057389 + GA-rich Low_complexity Low_complexity 1 179 0 411 254 35 9 chr17 32381576 32381690 -53056790 - MIR3 SINE MIR -28 180 64 495 227 46 29 chr17 32381881 32382072 -53056408 - MIR SINE MIR -51 157 19 206 157 43 14 chr17 32383176 32383246 -53055234 + GA-rich Low_complexity Low_complexity 2 73 0 21 0 0 0 chr17 32383779 32383800 -53054680 + AT_rich Low_complexity Low_complexity 1 21 0 333 155 0 0 chr17 32384319 32384377 -53054103 + (TG)n Simple_repeat Simple_repeat 1 58 0 233 321 37 0 chr17 32385113 32385194 -53053286 - MIR3 SINE MIR -7 201 118 3742 46 2 0 chr17 32385554 32386029 -53052451 - L1PA7 LINE L1 -11 6143 5668 195 42 0 0 chr17 32386262 32386286 -53052194 + (TTTTC)n Simple_repeat Simple_repeat 4 27 0 708 71 0 0 chr17 32386316 32386415 -53052065 - L1PA5 LINE L1 0 6154 6056 501 232 66 33 chr17 32386493 32386644 -53051836 - MIR SINE MIR -75 187 32 335 293 20 10 chr17 32386682 32386781 -53051699 + L2 LINE L2 3192 3291 -22 2226 102 0 10 chr17 32386800 32387094 -53051386 + AluSx SINE Alu 1 291 -21 621 168 0 0 chr17 32387239 32387346 -53051134 - FLAM_C SINE Alu -25 118 12 2374 101 0 0 chr17 32387691 32387988 -53050492 - AluSx SINE Alu -15 297 1 289 215 0 15 chr17 32388000 32388065 -53050415 - L2 LINE L2 -20 3252 3189 252 0 0 0 chr17 32389096 32389124 -53049356 + (TG)n Simple_repeat Simple_repeat 2 29 0 210 250 28 42 chr17 32389477 32389549 -53048931 + MIR SINE MIR 35 105 -157 242 359 8 17 chr17 32389647 32389764 -53048716 + L2 LINE L2 3081 3196 -76 1942 171 10 0 chr17 32389798 32390107 -53048373 + AluJo SINE Alu 1 312 0 180 200 0 0 chr17 32390199 32390239 -53048241 + (TATATG)n Simple_repeat Simple_repeat 2 41 0 324 0 0 0 chr17 32390276 32390312 -53048168 + (CA)n Simple_repeat Simple_repeat 2 37 0 836 201 59 5 chr17 32390926 32391130 -53047350 - MIR SINE MIR -25 237 23 1602 152 13 3 chr17 32392315 32392618 -53045862 - L1MB3 LINE L1 0 6183 5878 2278 101 0 3 chr17 32392629 32392927 -53045553 - AluSg SINE Alu -13 297 1 1589 113 0 52 chr17 32393175 32393423 -53045057 - AluJb SINE Alu -14 298 64 428 200 110 17 chr17 32393432 32393568 -53044912 - MER20B DNA MER1_type -43 176 29 263 211 18 0 chr17 32393594 32393651 -53044829 + L2 LINE L2 3213 3270 -2 265 258 45 110 chr17 32394435 32394590 -53043890 + L2 LINE L2 2916 3060 -212 210 319 0 66 chr17 32394792 32394883 -53043597 + L2 LINE L2 2995 3079 -193 313 274 171 8 chr17 32395194 32395311 -53043169 + MIR3 SINE MIR 11 146 -62 2408 89 3 0 chr17 32395411 32395715 -53042765 - AluSg SINE Alu -5 305 1 571 336 213 9 chr17 32395732 32396154 -53042326 - L3 LINE CR1 -2 1575 1068 2228 123 3 3 chr17 32396178 32396478 -53042002 - AluSx SINE Alu -12 300 1 2234 118 10 0 chr17 32396534 32396838 -53041642 - AluSx SINE Alu 0 312 6 1044 257 36 121 chr17 32397040 32397150 -53041330 + L1MC4a LINE L1 5254 5372 -796 1643 173 24 30 chr17 32397150 32397445 -53041035 - AluJb SINE Alu -19 293 1 1044 257 36 121 chr17 32397445 32398048 -53040432 + L1MC4a LINE L1 5372 5537 -631 198 0 0 0 chr17 32398195 32398217 -53040263 + (TA)n Simple_repeat Simple_repeat 2 23 0 2213 114 0 3 chr17 32398217 32398514 -53039966 - AluSq SINE Alu -17 296 1 2163 124 7 3 chr17 32398561 32398859 -53039621 - AluSx SINE Alu -13 299 1 804 120 0 0 chr17 32398962 32399070 -53039410 - AluJb SINE Alu -14 298 191 449 157 0 0 chr17 32399097 32399167 -53039313 - AluJ/FLAM SINE Alu -239 73 4 213 241 0 0 chr17 32399189 32399243 -53039237 + (TATATG)n Simple_repeat Simple_repeat 4 57 0 330 341 66 57 chr17 32399380 32399834 -53038646 + L2 LINE L2 2815 3272 0 263 303 140 11 chr17 32400149 32400327 -53038153 + MIR SINE MIR 43 243 -19 824 249 40 32 chr17 32400848 32401101 -53037379 + MIR SINE MIR 1 255 -7 439 97 43 11 chr17 32402076 32402169 -53036311 + C-rich Low_complexity Low_complexity 2 97 0 322 301 35 9 chr17 32402382 32402495 -53035985 + MER5A DNA MER1_type 44 159 -30 2095 110 36 29 chr17 32402495 32402862 -53035618 - AluSg SINE Alu 0 369 1 347 271 101 8 chr17 32402910 32403039 -53035441 + MIR SINE MIR 46 186 -76 350 231 110 0 chr17 32403645 32403736 -53034744 - MIR SINE MIR -111 151 51 2244 94 31 0 chr17 32403813 32404100 -53034380 - AluSx SINE Alu -16 296 1 21 0 0 0 chr17 32404100 32404121 -53034359 + AT_rich Low_complexity Low_complexity 1 21 0 247 182 121 0 chr17 32404172 32404238 -53034242 + MLT1K LTR MaLR 1 74 -514 242 91 0 0 chr17 32404259 32404292 -53034188 - U2 snRNA snRNA -155 33 1 558 259 100 6 chr17 32404579 32404749 -53033731 + MLT1K LTR MaLR 378 563 -25 282 292 31 46 chr17 32404906 32405036 -53033444 + MIR SINE MIR 20 147 -61 3845 136 77 8 chr17 32405036 32405697 -53032783 + MER39 LTR ERV1 1 707 0 348 183 0 0 chr17 32405905 32405998 -53032482 + (CCAA)n Simple_repeat Simple_repeat 2 94 0 235 310 50 30 chr17 32406070 32406170 -53032310 - L2 LINE L2 -229 3043 2942 211 305 29 67 chr17 32407500 32407605 -53030875 - MIR SINE MIR -72 190 90 2323 117 0 13 chr17 32407682 32407998 -53030482 + AluSx SINE Alu 1 312 0 364 220 110 0 chr17 32408114 32408205 -53030275 + MIR SINE MIR 51 151 -111 251 204 20 0 chr17 32408792 32408841 -53029639 + MIR SINE MIR 97 146 -62 185 367 145 36 chr17 32409765 32410013 -53028467 + L2 LINE L2 2966 3240 -32 222 91 0 0 chr17 32411058 32411091 -53027389 + (CAGA)n Simple_repeat Simple_repeat 4 36 0 220 296 12 0 chr17 32411778 32411859 -53026621 + G-rich Low_complexity Low_complexity 1 82 0 25 0 0 0 chr17 32412183 32412208 -53026272 + AT_rich Low_complexity Low_complexity 1 25 0 285 274 133 0 chr17 32413329 32413442 -53025038 + MIR SINE MIR 21 148 -60 213 231 123 15 chr17 32414611 32414676 -53023804 + MIR SINE MIR 10 81 -181 1926 145 0 0 chr17 32414688 32415124 -53023356 - AluSx SINE Alu 0 470 35 316 239 112 37 chr17 32415963 32416097 -53022383 + MIR3 SINE MIR 22 165 -43 297 267 17 92 chr17 32416294 32416414 -53022066 + MIR SINE MIR 120 230 -32 260 255 69 39 chr17 32416393 32416495 -53021985 - MIR SINE MIR -81 181 77 * 278 277 108 55 chr17 32417369 32417421 -53021059 - L1MC4a LINE L1 -1635 6173 6125 2292 103 3 3 chr17 32417421 32417722 -53020758 + AluSx SINE Alu 1 301 -11 2313 109 0 0 chr17 32417724 32418026 -53020454 + AluSx SINE Alu 1 302 -10 278 277 108 55 chr17 32418026 32418277 -53020203 - L1MC4a LINE L1 -1683 6125 5851 362 255 54 47 chr17 32418360 32418509 -53019971 + MIR SINE MIR 28 177 -85 2377 95 3 0 chr17 32418539 32418834 -53019646 + AluSp SINE Alu 1 296 -17 1202 240 26 8 chr17 32419978 32420336 -53018144 - L1 LINE L1 -1734 4412 4060 533 261 0 8 chr17 32420339 32420469 -53018011 - MIR SINE MIR -114 148 20 793 291 5 5 chr17 32420850 32421049 -53017431 + MIR SINE MIR 11 209 -53 342 280 106 8 chr17 32421223 32421355 -53017125 + MIR SINE MIR 92 236 -26 217 290 237 23 chr17 32421427 32421558 -53016922 - MIR SINE MIR -91 171 13 268 234 0 13 chr17 32422091 32422168 -53016312 + (CA)n Simple_repeat Simple_repeat 2 77 0 330 269 11 29 chr17 32422240 32422415 -53016065 + (CA)n Simple_repeat Simple_repeat 2 173 0 299 303 0 43 chr17 32422656 32422844 -53015636 + (CA)n Simple_repeat Simple_repeat 1 180 0 210 118 0 0 chr17 32422950 32422984 -53015496 + (GGGA)n Simple_repeat Simple_repeat 4 37 0 257 268 14 0 chr17 32423338 32423409 -53015071 - MIR SINE MIR -110 152 81 455 276 66 29 chr17 32423985 32424165 -53014315 - MIR SINE MIR -70 192 9 407 233 209 12 chr17 32424298 32424461 -53014019 + MIR SINE MIR 20 214 -48 366 231 67 164 chr17 32424714 32424909 -53013571 + MER5B DNA MER1_type 1 176 -2 358 255 0 75 chr17 32424924 32424988 -53013492 + MER5A DNA MER1_type 12 79 -110 2398 84 0 0 chr17 32424988 32425297 -53013183 + AluY SINE Alu 1 309 -2 2026 99 50 0 chr17 32425301 32425584 -53012896 + AluSq SINE Alu 3 299 -14 358 255 0 75 chr17 32425584 32425620 -53012860 + MER5A DNA MER1_type 82 109 -80 212 242 30 91 chr17 32426214 32426303 -53012177 + (TCTCTG)n Simple_repeat Simple_repeat 2 78 -78 1366 161 173 0 chr17 32426303 32426557 -53011923 - AluJo SINE Alu -4 298 1 212 242 30 91 chr17 32426557 32426632 -53011848 + (TCTCTG)n Simple_repeat Simple_repeat 78 156 0 257 50 0 25 chr17 32426647 32426687 -53011793 + (TTTTA)n Simple_repeat Simple_repeat 1 39 0 660 100 8 10 chr17 32426687 32426809 -53011671 - L1PA4 LINE L1 -24 6131 6024 243 262 262 8 chr17 32427033 32427155 -53011325 - MIR SINE MIR -79 183 31 2122 117 0 22 chr17 32427401 32427718 -53010762 - AluSx SINE Alu 0 312 3 447 361 80 24 chr17 32427864 32428350 -53010130 - L2 LINE L2 -20 3252 2739 1976 130 7 7 chr17 32428375 32428675 -53009805 + AluSx SINE Alu 1 300 -12 450 275 29 41 chr17 32428693 32428864 -53009616 - MLT1J2 LTR MaLR 0 450 282 1661 176 11 45 chr17 32428867 32429224 -53009256 - MLT1A2 LTR MaLR -1 373 29 509 323 24 0 chr17 32429327 32429494 -53008986 - MLT1J2 LTR MaLR -213 237 67 407 316 87 41 chr17 32429869 32430087 -53008393 + MIR SINE MIR 35 262 0 545 293 56 23 chr17 32430090 32430305 -53008175 + MIR SINE MIR 41 262 0 183 333 0 0 chr17 32430374 32430425 -53008055 + L2 LINE L2 3263 3313 0 564 269 98 43 chr17 32430520 32430754 -53007726 + MIR SINE MIR 2 248 -14 473 221 245 6 chr17 32431248 32431411 -53007069 - MIR SINE MIR -38 224 23 256 279 45 27 chr17 32432419 32432530 -53005950 + MIR SINE MIR 68 180 -82 411 296 25 70 chr17 32433132 32433331 -53005149 - MIR SINE MIR -71 191 2 2326 225 33 14 chr17 32433662 32434173 -53004307 - MLT1F LTR MaLR 0 542 22 373 264 70 12 chr17 32434214 32434388 -53004092 + L1ME3A LINE L1 5928 6122 -48 1981 132 20 0 chr17 32434468 32434764 -53003716 - AluSx SINE Alu -10 302 1 251 361 0 10 chr17 32434783 32434880 -53003600 - MIR SINE MIR -77 131 36 848 274 239 3 chr17 32435316 32435684 -53002796 - L2 LINE L2 -5 3308 2854 186 343 14 14 chr17 32435684 32435757 -53002723 + MIR SINE MIR 23 95 -167 1771 163 3 0 chr17 32435812 32436101 -53002379 - AluJb SINE Alu -22 290 1 1804 133 30 30 chr17 32436101 32436401 -53002079 - AluJb SINE Alu -12 300 1 376 222 12 12 chr17 32436483 32436564 -53001916 + L2 LINE L2 3186 3266 -47 398 199 189 60 chr17 32436677 32436878 -53001602 - L2 LINE L2 -213 3059 2833 592 160 8 8 chr17 32437010 32437135 -53001345 + GA-rich Low_complexity Low_complexity 1 125 0 420 139 178 30 chr17 32438092 32438193 -53000287 - FLAM_A SINE Alu -7 135 20 368 211 0 13 chr17 32438195 32438271 -53000209 + MIR SINE MIR 79 153 -55 245 275 306 16 chr17 32438601 32438794 -52999686 + MIR SINE MIR 13 261 -1 387 269 56 9 chr17 32439537 32439645 -52998835 - MIR SINE MIR -118 144 32 455 177 71 9 chr17 32439790 32439917 -52998563 - MIR SINE MIR -61 147 29 317 298 82 28 chr17 32440418 32440673 -52997807 + L2 LINE L2 2470 2738 -576 1952 154 0 6 chr17 32440685 32440997 -52997483 + AluSx SINE Alu 1 310 -2 401 274 63 89 chr17 32441010 32441393 -52997087 + L2 LINE L2 2825 3197 -75 227 145 16 65 chr17 32441991 32442053 -52996427 + C-rich Low_complexity Low_complexity 2 60 0 681 239 13 80 chr17 32442818 32443057 -52995423 - MIR SINE MIR -33 229 7 901 238 10 5 chr17 32443881 32444087 -52994393 - MIR SINE MIR -21 241 35 932 205 68 19 chr17 32444090 32444295 -52994185 - MIR SINE MIR -11 251 37 186 43 0 0 chr17 32444470 32444493 -52993987 + (CAGG)n Simple_repeat Simple_repeat 3 25 0 240 382 26 49 chr17 32444961 32445265 -52993215 + L2 LINE L2 2564 2860 -454 351 197 0 15 chr17 32445289 32445355 -52993125 - MIR SINE MIR -1 261 197 1535 154 4 0 chr17 32445355 32445601 -52992879 - Tigger3(Golem) DNA MER2_type -1 3028 2782 2131 118 0 16 chr17 32445601 32445937 -52992543 + AluSc SINE Alu 1 309 0 186 189 0 0 chr17 32445937 32445974 -52992506 + GA-rich Low_complexity Low_complexity 1 37 0 273 281 79 12 chr17 32446005 32446169 -52992311 + L2 LINE L2 2862 3036 -236 240 204 20 0 chr17 32447063 32447132 -52991348 + C-rich Low_complexity Low_complexity 1 70 0 2458 167 42 56 chr17 32447154 32447199 -52991281 - L1MA9 LINE L1 -5 6307 6263 2153 110 10 0 chr17 32447199 32447498 -52990982 + AluSx SINE Alu 1 302 -10 2458 167 42 56 chr17 32447498 32448022 -52990458 - L1MA9 LINE L1 -49 6263 5746 208 286 0 0 chr17 32448067 32448123 -52990357 + L2 LINE L2 3217 3272 0 182 244 24 0 chr17 32448389 32448430 -52990050 - MIR SINE MIR -6 256 215 1177 35 35 11 chr17 32448595 32448769 -52989711 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 6349 70 9 6 chr17 32448800 32449673 -52988807 - L1PA8A LINE L1 -2 6129 5254 309 326 136 0 chr17 32450308 32450440 -52988040 - MIR SINE MIR -82 180 31 366 298 18 9 chr17 32450732 32450846 -52987634 - MIR SINE MIR -76 132 18 1839 156 10 3 chr17 32450930 32451232 -52987248 - AluJo SINE Alu -8 304 1 1285 199 52 19 chr17 32451977 32452284 -52986196 + MER58B DNA MER1_type 1 317 -24 1071 107 13 0 chr17 32452285 32452435 -52986045 - AluSg/x SINE Alu -7 303 152 839 207 88 51 chr17 32452540 32452757 -52985723 + AluJo SINE Alu 85 309 -3 258 304 22 43 chr17 32453212 32453350 -52985130 - MER5B DNA MER1_type -35 143 9 2075 94 37 7 chr17 32453373 32453672 -52984808 + AluSx SINE Alu 1 308 -4 254 326 0 0 chr17 32455517 32455606 -52982874 + GA-rich Low_complexity Low_complexity 1 89 0 245 282 73 18 chr17 32456492 32456602 -52981878 + L2 LINE L2 2946 3061 -211 654 247 79 71 chr17 32456693 32456992 -52981488 - L2 LINE L2 -5 3308 3035 817 25 33 8 chr17 32457202 32457323 -52981157 + (TTTC)n Simple_repeat Simple_repeat 3 126 0 865 174 14 0 chr17 32457324 32457468 -52981012 - FRAM SINE Alu -30 146 1 338 288 91 25 chr17 32457591 32457771 -52980709 - MIR SINE MIR 0 262 61 2066 100 0 30 chr17 32457771 32458072 -52980408 - AluSq SINE Alu -21 292 1 338 288 91 25 chr17 32458072 32458129 -52980351 - MIR SINE MIR -201 61 9 185 244 22 0 chr17 32459378 32459423 -52979057 + L2 LINE L2 3252 3297 -16 2342 94 0 0 chr17 32459545 32459852 -52978628 - AluSx SINE Alu -5 307 1 282 303 67 51 chr17 32459950 32460145 -52978335 - L2 LINE L2 -338 2976 2779 888 266 44 62 chr17 32460374 32460761 -52977719 - MLT1I LTR MaLR 0 409 30 613 121 0 0 chr17 32460863 32460946 -52977534 + FRAM SINE Alu 31 113 -63 2241 92 3 13 chr17 32461221 32461527 -52976953 + AluSx SINE Alu 1 303 -9 385 276 22 36 chr17 32462087 32462139 -52976341 + GA-rich Low_complexity Low_complexity 1 52 -1255 1863 127 3 54 chr17 32462139 32462267 -52976213 + AluJo SINE Alu 1 134 -168 1902 138 0 46 chr17 32462267 32462457 -52976023 - AluSx SINE Alu 0 312 115 267 103 0 0 chr17 32462457 32462496 -52975984 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 2119 88 0 3 chr17 32462496 32462779 -52975701 - AluSg SINE Alu -28 282 1 1902 138 0 46 chr17 32462779 32462914 -52975566 - AluSx SINE Alu -195 117 1 1863 127 3 54 chr17 32462914 32463100 -52975380 + AluJo SINE Alu 134 299 -3 385 276 22 36 chr17 32463100 32463413 -52975067 + GA-rich Low_complexity Low_complexity 52 1307 0 405 283 29 51 chr17 32464181 32464358 -52974122 + MIR SINE MIR 32 207 -55 2190 75 3 39 chr17 32464492 32464798 -52973682 - AluSx SINE Alu -17 295 1 229 345 71 9 chr17 32464999 32465112 -52973368 + L2 LINE L2 3153 3272 0 619 260 69 76 chr17 32465317 32465394 -52973086 + L2 LINE L2 2639 2715 -598 1959 139 0 3 chr17 32465394 32465695 -52972785 + AluSx SINE Alu 1 300 -12 619 260 69 76 chr17 32465695 32466040 -52972440 + L2 LINE L2 2715 3059 -254 870 317 42 8 chr17 32466091 32466444 -52972036 - L1MEd LINE L1 -5305 814 450 2226 109 0 6 chr17 32466457 32466769 -52971711 - AluSg SINE Alu 0 310 1 2053 119 7 7 chr17 32466773 32467126 -52971354 - AluSg SINE Alu 0 310 1 603 176 29 0 chr17 32467145 32467247 -52971233 - AluJo/FRAM SINE Alu -20 292 188 625 143 0 184 chr17 32467247 32467394 -52971086 + FLAM_C SINE Alu 2 121 -22 382 247 11 0 chr17 32467420 32467513 -52970967 - AluSc SINE Alu -101 198 105 571 235 12 37 chr17 32467530 32467692 -52970788 - L1MEd LINE L1 -5959 160 3 646 264 56 15 chr17 32467716 32467913 -52970567 + L2 LINE L2 3108 3312 -1 538 241 170 31 chr17 32467892 32468116 -52970364 + MIR SINE MIR 7 261 -1 * 472 197 103 54 chr17 32468482 32468596 -52969884 + MIR SINE MIR 50 180 -82 1841 164 3 3 chr17 32468596 32468900 -52969580 - AluSx SINE Alu -8 304 1 472 197 103 54 chr17 32468900 32468988 -52969492 + MIR SINE MIR 180 262 0 386 192 14 0 chr17 32468991 32469064 -52969416 + L2 LINE L2 3225 3298 -15 563 92 11 0 chr17 32469066 32469153 -52969327 + (TGGA)n Simple_repeat Simple_repeat 1 88 0 214 254 18 0 chr17 32469256 32469311 -52969169 - MIR3 SINE MIR -2 206 151 455 314 19 19 chr17 32469443 32469602 -52968878 - MIR3 SINE MIR -46 162 4 1727 174 0 0 chr17 32469652 32469955 -52968525 - AluJo SINE Alu 0 303 1 30 0 0 0 chr17 32469955 32469985 -52968495 + AT_rich Low_complexity Low_complexity 1 30 0 1656 170 0 39 chr17 32470123 32470434 -52968046 - AluJo SINE Alu -13 299 1 415 269 138 8 chr17 32470503 32470633 -52967847 - L1MC4 LINE L1 0 8042 7896 349 317 59 34 chr17 32470688 32470929 -52967551 - L1MC4a LINE L1 -224 5946 5810 410 266 0 0 chr17 32470971 32471065 -52967415 - L1MC4a LINE L1 -462 5708 5615 824 244 156 39 chr17 32471067 32471506 -52966974 - MLT1G LTR MaLR -2 590 103 256 248 33 113 chr17 32471550 32471626 -52966854 - L1MC4a LINE L1 -507 5614 5534 2032 114 0 41 chr17 32471626 32471931 -52966549 - AluSx SINE Alu -21 291 1 256 248 33 113 chr17 32471931 32472062 -52966418 - L1MC4a LINE L1 -587 5534 5426 1939 168 7 0 chr17 32472094 32472398 -52966082 - AluJo SINE Alu -6 306 1 451 286 63 11 chr17 32472398 32472573 -52965907 - L1MC4a LINE L1 -722 5442 5259 190 257 90 56 chr17 32473048 32473192 -52965288 + L2 LINE L2 2916 3064 -208 818 196 37 0 chr17 32473448 32473611 -52964869 - MER3 DNA MER1_type -78 131 10 411 134 247 21 chr17 32473611 32473708 -52964772 + AluJb SINE Alu 2 120 -192 369 186 29 0 chr17 32473869 32473939 -52964541 + MIR SINE MIR 56 127 -81 227 196 0 36 chr17 32474019 32474075 -52964405 + G-rich Low_complexity Low_complexity 2 55 0 299 306 139 7 chr17 32474649 32474793 -52963687 + MIR SINE MIR 90 252 -10 714 72 0 0 chr17 32476041 32476138 -52962342 + (TTCA)n Simple_repeat Simple_repeat 1 97 0 718 145 21 41 chr17 32476201 32476346 -52962134 - FLAM_C SINE Alu 0 143 2 250 250 0 0 chr17 32476365 32476433 -52962047 - MIR SINE MIR -131 131 64 416 306 0 0 chr17 32476769 32476877 -52961603 - MER5B DNA MER1_type -69 109 2 361 221 84 0 chr17 32477700 32477795 -52960685 - MER5A DNA MER1_type -83 106 4 395 266 18 25 chr17 32478292 32478434 -52960046 + MIR3 SINE MIR 45 185 -47 465 301 49 12 chr17 32478530 32478693 -52959787 + MIR SINE MIR 56 224 -38 336 48 0 0 chr17 32478693 32478735 -52959745 + (CA)n Simple_repeat Simple_repeat 1 42 0 289 312 152 0 chr17 32479403 32479541 -52958939 + MIR SINE MIR 64 222 -40 2039 142 20 0 chr17 32479546 32479848 -52958632 + AluSq SINE Alu 1 308 -5 300 320 31 23 chr17 32480224 32480352 -52958128 + L3b LINE CR1 1267 1395 -188 1569 188 0 11 chr17 32481112 32481384 -52957096 - AluJb SINE Alu -6 306 38 269 221 0 29 chr17 32481631 32481699 -52956781 + (CA)n Simple_repeat Simple_repeat 1 66 0 687 195 92 18 chr17 32483700 32483864 -52954616 + MER45A DNA AcHobo 1 176 -2 186 267 189 0 chr17 32484016 32484106 -52954374 + MIR3 SINE MIR 78 184 -24 752 204 6 0 chr17 32484169 32484345 -52954135 + (CA)n Simple_repeat Simple_repeat 1 177 0 208 106 0 43 chr17 32485371 32485418 -52953062 + (CA)n Simple_repeat Simple_repeat 1 45 0 252 274 141 15 chr17 32487544 32487679 -52950801 - MIR SINE MIR -80 182 31 438 258 172 19 chr17 32488826 32489145 -52949335 - L2 LINE L2 -225 3088 2712 472 227 42 0 chr17 32489159 32489278 -52949202 + MIR SINE MIR 83 206 -56 277 267 58 23 chr17 32489414 32489500 -52948980 - L2 LINE L2 -6 3307 3219 255 232 0 0 chr17 32490255 32490311 -52948169 - L2 LINE L2 -1 3271 3216 373 267 208 28 chr17 32490807 32490986 -52947494 - MIR SINE MIR -57 205 6 2188 119 30 0 chr17 32490991 32491294 -52947186 - AluSx SINE Alu 0 312 1 345 231 127 15 chr17 32492476 32492610 -52945870 + MIR SINE MIR 70 218 -44 235 88 15 88 chr17 32492877 32492945 -52945535 + (CGAGG)n Simple_repeat Simple_repeat 4 66 0 392 275 90 25 chr17 32493336 32493536 -52944944 - MIR SINE MIR -12 250 38 662 267 17 61 chr17 32494203 32494402 -52944078 + L1M4 LINE L1 2685 2863 -3283 2187 87 7 0 chr17 32494402 32494708 -52943772 + AluSc SINE Alu 1 308 0 662 267 17 61 chr17 32494708 32494866 -52943614 + L1M4 LINE L1 2863 3027 -3119 1238 149 5 23 chr17 32494961 32495175 -52943305 + MER2 DNA MER2_type 1 210 -135 330 103 29 73 chr17 32495187 32495255 -52943225 - Alu SINE Alu 0 302 238 270 0 0 0 chr17 32495707 32495737 -52942743 + (TTCA)n Simple_repeat Simple_repeat 3 32 0 569 241 14 24 chr17 32496087 32496257 -52942223 + MIR SINE MIR 6 172 -67 192 77 0 0 chr17 32496291 32496317 -52942163 + (TG)n Simple_repeat Simple_repeat 1 26 0 285 262 0 0 chr17 32496652 32496713 -52941767 + L2 LINE L2 3200 3260 -12 1894 159 14 7 chr17 32496713 32497009 -52941471 + AluJo SINE Alu 1 298 -14 393 297 179 20 chr17 32497089 32497335 -52941145 - L1ME4a LINE L1 -28 6093 5809 385 282 43 54 chr17 32497350 32497627 -52940853 + L1ME3A LINE L1 2675 2948 -3198 2083 138 0 0 chr17 32497627 32497961 -52940519 + AluSx SINE Alu 1 334 0 5030 131 84 104 chr17 32497966 32498010 -52940470 + L1MC3 LINE L1 6378 6421 -1364 531 139 0 0 chr17 32498010 32498096 -52940384 - L1PA13 LINE L1 -3 6160 6075 5030 131 84 104 chr17 32498096 32498772 -52939708 + L1MC3 LINE L1 6421 7109 -676 278 333 0 0 chr17 32498772 32498859 -52939621 + MLT1F1 LTR MaLR 39 125 -442 2312 98 3 0 chr17 32498862 32499157 -52939323 + AluSx SINE Alu 5 300 -12 5030 131 84 104 chr17 32499157 32499346 -52939134 + L1MC3 LINE L1 7111 7302 -483 2175 75 3 39 chr17 32499346 32499663 -52938817 + AluSx SINE Alu 12 318 0 5030 131 84 104 chr17 32499663 32499881 -52938599 + L1MC3 LINE L1 7302 7574 -211 1305 140 12 66 chr17 32499882 32500139 -52938341 - L1MA4 LINE L1 -437 5863 5621 26 0 0 0 chr17 32500169 32500195 -52938285 + AT_rich Low_complexity Low_complexity 1 26 0 1036 156 13 34 chr17 32500202 32500281 -52938199 + L1MC3 LINE L1 7552 7631 -154 1807 128 68 0 chr17 32500281 32500532 -52937948 + AluJb SINE Alu 1 268 -44 306 0 0 0 chr17 32500532 32500566 -52937914 + (TAA)n Simple_repeat Simple_repeat 1 34 0 1036 156 13 34 chr17 32500566 32500722 -52937758 + L1MC3 LINE L1 7629 7783 -2 256 225 79 11 chr17 32500712 32500801 -52937679 + L1ME3A LINE L1 2926 3020 -3126 * 1061 278 71 10 chr17 32500806 32501115 -52937365 + MLT1I LTR MaLR 1 328 -81 414 249 96 39 chr17 32501387 32501773 -52936707 + L1ME3A LINE L1 4984 5391 -755 756 234 11 21 chr17 32501829 32502017 -52936463 + AluJb SINE Alu 121 306 -6 507 143 0 0 chr17 32502097 32502181 -52936299 + AluJ/FRAM SINE Alu 229 312 0 429 318 63 31 chr17 32502186 32502504 -52935976 + L1ME3A LINE L1 5610 5937 -233 249 81 27 0 chr17 32502730 32502767 -52935713 - LTR33A LTR ERVL 0 523 486 * 447 233 61 33 chr17 32502737 32502917 -52935563 - LTR41 LTR ERVL -6 767 583 593 228 54 54 chr17 32503157 32503341 -52935139 - LTR41 LTR ERVL -589 184 1 2133 141 7 0 chr17 32503508 32503805 -52934675 + AluSx SINE Alu 1 299 -13 361 297 29 14 chr17 32503978 32504116 -52934364 + L1M4 LINE L1 2148 2287 -3859 3220 134 29 20 chr17 32504428 32504530 -52933950 + L1MB3 LINE L1 5587 5687 -496 2261 124 0 0 chr17 32504530 32504837 -52933643 + AluSx SINE Alu 1 307 -5 3220 134 29 20 chr17 32504837 32505325 -52933155 + L1MB3 LINE L1 5687 6182 -1 2266 120 10 0 chr17 32505335 32505644 -52932836 + AluSx SINE Alu 1 312 0 349 254 107 8 chr17 32505986 32506108 -52932372 + MIR SINE MIR 20 153 -109 1280 175 35 4 chr17 32506315 32506572 -52931908 - L1MD2 LINE L1 0 6359 6095 775 160 0 0 chr17 32506758 32506883 -52931597 + FLAM_C SINE Alu 1 125 -8 249 33 0 0 chr17 32506883 32506913 -52931567 + (GA)n Simple_repeat Simple_repeat 2 31 0 281 306 88 31 chr17 32507512 32507672 -52930808 + MIR SINE MIR 80 248 -14 606 97 26 0 chr17 32507985 32508098 -52930382 + CT-rich Low_complexity Low_complexity 1 116 0 391 307 0 0 chr17 32509688 32509789 -52928691 + MIR SINE MIR 111 211 -51 405 301 104 11 chr17 32510159 32510342 -52928138 + L2 LINE L2 2605 2804 -510 1709 188 17 11 chr17 32510849 32511136 -52927344 + AluJb SINE Alu 2 290 -22 1816 165 13 25 chr17 32511199 32511584 -52926896 + AluJo SINE Alu 1 381 0 346 292 102 42 chr17 32511634 32511918 -52926562 - MLT1K LTR MaLR 0 588 288 1409 236 107 40 chr17 32511922 32512498 -52925982 + MLT1G LTR MaLR 1 576 -14 1071 282 40 21 chr17 32512708 32512861 -52925619 - L1ME4a LINE L1 -126 5995 5846 2032 139 0 20 chr17 32512861 32513156 -52925324 - AluJo SINE Alu -12 300 12 1071 282 40 21 chr17 32513156 32513431 -52925049 - L1ME4a LINE L1 -275 5846 5559 798 156 11 15 chr17 32513431 32513697 -52924783 + CT-rich Low_complexity Low_complexity 1 264 0 1963 172 0 3 chr17 32513702 32513999 -52924481 - AluJb SINE Alu -16 296 1 2983 3 0 0 chr17 32514014 32514325 -52924155 - AluYa5 SINE Alu 0 311 1 461 291 123 19 chr17 32514352 32514613 -52923867 - L1ME4a LINE L1 -2266 5542 5255 2387 109 0 0 chr17 32514678 32514981 -52923499 - AluSg SINE Alu -7 303 1 1400 219 58 26 chr17 32515581 32515960 -52922520 + LTR16A1 LTR ERVL 65 455 -2 576 208 71 38 chr17 32516432 32516615 -52921865 + MLT1K LTR MaLR 393 581 -7 302 274 142 18 chr17 32517062 32517175 -52921305 + MIR SINE MIR 20 146 -116 334 335 91 23 chr17 32517810 32518031 -52920449 - MIR SINE MIR -6 256 21 596 306 42 14 chr17 32518409 32518655 -52919825 + MIR SINE MIR 11 259 -3 1815 159 3 32 chr17 32518660 32518974 -52919506 + AluJo SINE Alu 1 305 -7 1051 205 40 9 chr17 32519050 32519274 -52919206 - MIR SINE MIR 0 262 32 2114 118 0 21 chr17 32519582 32519871 -52918609 - AluSq SINE Alu -29 284 2 609 212 8 30 chr17 32519878 32520010 -52918470 - FLAM_C SINE Alu -4 129 1 183 300 0 17 chr17 32520011 32520071 -52918409 - L2 LINE L2 -349 2964 2906 548 303 37 6 chr17 32520718 32520908 -52917572 + MIR SINE MIR 9 202 -60 235 304 0 0 chr17 32521417 32521486 -52916994 + MIR SINE MIR 63 131 -77 326 23 23 0 chr17 32521576 32521619 -52916861 + (TGAA)n Simple_repeat Simple_repeat 3 46 0 185 341 23 0 chr17 32521658 32521746 -52916734 + MIR3 SINE MIR 109 198 -10 241 301 124 13 chr17 32522453 32522606 -52915874 + MIR SINE MIR 89 258 -4 183 267 0 0 chr17 32523323 32523368 -52915112 + MIR SINE MIR 108 152 -56 1044 88 0 29 chr17 32523370 32523507 -52914973 + AluSq/x SINE Alu 1 133 -179 264 167 0 0 chr17 32523624 32523672 -52914808 + CT-rich Low_complexity Low_complexity 3 50 0 478 246 43 22 chr17 32524075 32524213 -52914267 - MLT1J1 LTR MaLR -239 207 67 5606 99 4 2 chr17 32524213 32524595 -52913885 - L1PA15 LINE L1 -2 6163 5783 1866 109 16 8 chr17 32524595 32524852 -52913628 - AluSq SINE Alu -54 259 1 5606 99 4 2 chr17 32524852 32525300 -52913180 - L1PA15 LINE L1 -382 5783 5332 184 330 140 10 chr17 32525541 32525641 -52912839 + L2 LINE L2 2924 3036 -277 847 173 0 0 chr17 32525689 32525822 -52912658 + AluJo SINE Alu 1 133 -179 381 260 39 65 chr17 32525826 32525980 -52912500 - MIR3 SINE MIR -48 160 11 339 323 0 32 chr17 32526006 32526130 -52912350 + MIR3 SINE MIR 59 178 -30 387 246 48 32 chr17 32526296 32526422 -52912058 - MIR SINE MIR -37 225 98 309 366 69 27 chr17 32526425 32526687 -52911793 + L3 LINE CR1 1276 1548 -29 695 263 48 24 chr17 32526687 32526938 -52911542 - MER113 DNA MER1_type? -50 471 215 303 207 78 35 chr17 32526947 32527063 -52911417 - MER113 DNA MER1_type? -275 246 126 4403 141 24 41 chr17 32527073 32527976 -52910504 + L1MC2 LINE L1 5186 6073 -271 1662 263 65 4 chr17 32527976 32528456 -52910024 + L1ME3 LINE L1 5632 6140 -22 307 247 47 0 chr17 32529098 32529183 -52909297 - L3 LINE CR1 -58 1519 1431 983 196 12 0 chr17 32529475 32529643 -52908837 + AluJo SINE Alu 137 306 -6 276 87 0 87 chr17 32529645 32529714 -52908766 + (GGGAA)n Simple_repeat Simple_repeat 2 64 0 183 42 0 0 chr17 32530087 32530111 -52908369 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 1071 143 7 0 chr17 32530114 32530261 -52908219 - AluJo/FRAM SINE Alu -31 281 134 2012 127 31 10 chr17 32530261 32530553 -52907927 - AluSx SINE Alu -14 298 1 1920 154 0 16 chr17 32530553 32530858 -52907622 - AluJb SINE Alu -12 300 1 380 125 200 67 chr17 32530868 32530988 -52907492 - MIR SINE MIR -107 155 20 314 289 195 8 chr17 32532358 32532486 -52905994 + MIR3 SINE MIR 20 171 -37 325 303 136 13 chr17 32533399 32533554 -52904926 - MIR SINE MIR 0 262 89 189 311 87 10 chr17 32533652 32533755 -52904725 - MIR SINE MIR -58 150 40 403 255 70 38 chr17 32535148 32535305 -52903175 - MIR SINE MIR -13 249 88 346 345 28 14 chr17 32535364 32535509 -52902971 + MIR3 SINE MIR 3 149 -59 2280 89 4 0 chr17 32535729 32536048 -52902432 + AluSx SINE Alu 1 320 0 2335 119 3 0 chr17 32536127 32536437 -52902043 + AluSx SINE Alu 1 311 -1 352 299 28 0 chr17 32536437 32536544 -52901936 + MIR SINE MIR 145 254 -8 3641 166 43 45 chr17 32537111 32537205 -52901275 + L1MB4 LINE L1 5350 5443 -737 1910 115 65 11 chr17 32537205 32537484 -52900996 + AluSx SINE Alu 1 294 -18 3641 166 43 45 chr17 32537484 32538221 -52900259 + L1MB4 LINE L1 5443 6180 0 437 263 6 17 chr17 32539106 32539285 -52899195 + (CA)n Simple_repeat Simple_repeat 1 177 0 432 265 6 17 chr17 32539323 32539504 -52898976 + (CA)n Simple_repeat Simple_repeat 1 179 0 314 276 0 43 chr17 32539429 32539614 -52898866 + (CTCA)n Simple_repeat Simple_repeat 2 178 0 * 433 247 19 13 chr17 32539648 32539806 -52898674 + (CA)n Simple_repeat Simple_repeat 1 159 0 451 282 0 28 chr17 32539829 32540010 -52898470 + (CA)n Simple_repeat Simple_repeat 2 177 0 322 288 0 20 chr17 32540025 32540171 -52898309 + (CA)n Simple_repeat Simple_repeat 1 143 0 349 292 0 32 chr17 32540209 32540394 -52898086 + (CA)n Simple_repeat Simple_repeat 1 179 0 313 343 12 0 chr17 32540470 32540642 -52897838 + (CA)n Simple_repeat Simple_repeat 1 174 0 298 291 13 0 chr17 32540719 32540798 -52897682 - MIR3 SINE MIR -15 193 114 213 307 27 13 chr17 32540917 32540992 -52897488 + MIR SINE MIR 137 212 -50 180 77 0 0 chr17 32541519 32541545 -52896935 + (TCTG)n Simple_repeat Simple_repeat 3 28 0 835 235 18 0 chr17 32541672 32541842 -52896638 - MER63A DNA MER1_type -37 173 1 205 198 11 33 chr17 32541951 32542011 -52896469 + MIR SINE MIR 104 160 -102 481 289 128 13 chr17 32542024 32542089 -52896391 - MER5A DNA MER1_type -9 180 124 1653 177 19 53 chr17 32542089 32542467 -52896013 - MLT1A1 LTR MaLR 0 365 1 481 289 128 13 chr17 32542467 32542557 -52895923 - MER5A DNA MER1_type -65 124 7 2133 123 13 10 chr17 32543246 32543546 -52894934 - AluSx SINE Alu -11 301 1 180 267 0 0 chr17 32543570 32543615 -52894865 + L2 LINE L2 3143 3187 -85 531 90 0 0 chr17 32544519 32544597 -52893883 + (TTCA)n Simple_repeat Simple_repeat 1 78 0 999 267 90 15 chr17 32544597 32544660 -52893820 - L2 LINE L2 -10 3303 3246 1905 185 25 2 chr17 32544660 32545065 -52893415 + L1MB4 LINE L1 5767 6180 0 2160 137 0 3 chr17 32545071 32545384 -52893096 + AluSx SINE Alu 1 312 0 999 267 90 15 chr17 32545384 32545767 -52892713 - L2 LINE L2 -71 3242 2812 2482 103 0 0 chr17 32546197 32546508 -52891972 - AluSx SINE Alu -1 311 1 1246 245 109 17 chr17 32546854 32547632 -52890848 + L2 LINE L2 2457 3313 0 302 180 18 5 chr17 32547738 32547817 -52890663 - MIR SINE MIR -65 143 64 285 281 62 31 chr17 32548606 32548702 -52889778 + MIR SINE MIR 159 257 -5 287 302 12 12 chr17 32549112 32549198 -52889282 - MIR SINE MIR -117 145 60 806 302 0 12 chr17 32549356 32549598 -52888882 - MIR SINE MIR -22 240 2 335 306 98 29 chr17 32552312 32552485 -52885995 - L3 LINE CR1 -24 1553 1369 421 224 15 82 chr17 32553029 32553163 -52885317 - L3 LINE CR1 -207 1370 1246 2413 92 0 13 chr17 32553495 32553809 -52884671 + AluSx SINE Alu 1 310 -2 234 268 31 10 chr17 32554160 32554257 -52884223 + (TG)n Simple_repeat Simple_repeat 1 99 0 289 380 73 27 chr17 32554349 32554499 -52883981 + L2 LINE L2 3107 3263 -9 219 69 0 0 chr17 32554509 32554538 -52883942 + (AACTG)n Simple_repeat Simple_repeat 4 32 0 183 129 0 0 chr17 32554736 32554767 -52883713 + (TG)n Simple_repeat Simple_repeat 1 31 0 1006 229 39 92 chr17 32555869 32556305 -52882175 + L1ME3A LINE L1 5749 6161 -9 2855 187 39 34 chr17 32556472 32557247 -52881233 - L1M4 LINE L1 -2804 3342 2564 342 297 0 20 chr17 32557515 32557616 -52880864 - MIR3 SINE MIR -22 186 88 413 273 19 14 chr17 32557793 32557920 -52880560 + MIR SINE MIR 22 142 -66 474 294 35 25 chr17 32558290 32558487 -52879993 + L1MC5 LINE L1 7715 7913 -48 215 30 0 30 chr17 32559178 32559211 -52879269 + (CA)n Simple_repeat Simple_repeat 1 32 0 302 307 11 6 chr17 32559233 32559409 -52879071 + (CA)n Simple_repeat Simple_repeat 1 177 0 418 194 11 17 chr17 32559448 32559628 -52878852 + (CA)n Simple_repeat Simple_repeat 1 179 0 198 227 0 0 chr17 32559738 32559813 -52878667 + (CA)n Simple_repeat Simple_repeat 1 75 0 366 253 0 0 chr17 32559833 32560007 -52878473 + (CA)n Simple_repeat Simple_repeat 2 175 0 238 253 0 12 chr17 32560021 32560187 -52878293 + (CA)n Simple_repeat Simple_repeat 2 165 0 223 242 0 0 chr17 32560236 32560298 -52878182 + (CA)n Simple_repeat Simple_repeat 2 63 0 203 270 79 11 chr17 32560374 32560463 -52878017 + MIR SINE MIR 95 189 -73 218 268 73 0 chr17 32560870 32560952 -52877528 - MIR SINE MIR -115 147 60 247 265 0 0 chr17 32561344 32561393 -52877087 + polypyrimidine Low_complexity Low_complexity 1 49 0 263 224 188 0 chr17 32561560 32561645 -52876835 + MIR SINE MIR 119 219 -43 2187 129 0 10 chr17 32561654 32561965 -52876515 + AluSx SINE Alu 1 308 -4 311 149 52 3 chr17 32561985 32562055 -52876425 + AluJ/FLAM SINE Alu 1 58 -244 971 171 6 0 chr17 32562055 32562213 -52876267 - AluJo SINE Alu -139 173 15 2676 133 50 26 chr17 32562318 32562815 -52875665 - L1MA6 LINE L1 -188 6112 5604 798 188 0 0 chr17 32562836 32563001 -52875479 + CT-rich Low_complexity Low_complexity 4 168 0 731 212 0 0 chr17 32563003 32563135 -52875345 - FRAM SINE Alu -13 163 32 1357 187 33 0 chr17 32563135 32563408 -52875072 - L1MA6 LINE L1 -847 5299 5018 399 250 73 8 chr17 32563411 32563535 -52874945 - MIR3 SINE MIR -14 194 63 1784 213 24 37 chr17 32563662 32564127 -52874353 - MLT1C LTR MaLR -1 466 8 1613 168 44 47 chr17 32564794 32565092 -52873388 + AluJo SINE Alu 1 297 -15 2087 102 0 71 chr17 32565094 32565451 -52873029 + AluSx SINE Alu 1 312 0 794 153 0 0 chr17 32566382 32566506 -52871974 + FLAM_C SINE Alu 1 124 -9 273 109 0 0 chr17 32566506 32566552 -52871928 + (TA)n Simple_repeat Simple_repeat 2 47 0 182 304 0 0 chr17 32567432 32567478 -52871002 - L2 LINE L2 -12 3301 3256 1975 157 0 40 chr17 32567496 32567821 -52870659 + AluJo SINE Alu 1 312 0 481 187 60 45 chr17 32567850 32567984 -52870496 + AluJo SINE Alu 7 142 -170 215 30 0 30 chr17 32568320 32568353 -52870127 + (TTG)n Simple_repeat Simple_repeat 1 32 0 1712 158 11 0 chr17 32568361 32568621 -52869859 - AluJb SINE Alu -49 263 1 235 203 85 0 chr17 32568993 32569052 -52869428 - L2 LINE L2 -1 3312 3249 207 318 0 0 chr17 32569297 32569360 -52869120 + MIR SINE MIR 84 146 -116 800 169 6 42 chr17 32569362 32569528 -52868952 + L1MD3 LINE L1 7834 7993 -2 2260 95 0 3 chr17 32569584 32569891 -52868589 - AluSx SINE Alu 0 306 1 2046 126 4 0 chr17 32569891 32570169 -52868311 - AluSq SINE Alu -34 279 1 344 282 115 35 chr17 32570195 32570369 -52868111 - MIR SINE MIR -71 191 4 332 243 25 30 chr17 32570955 32571084 -52867396 + MIR SINE MIR 33 160 -66 185 274 65 16 chr17 32571233 32571295 -52867185 + L2 LINE L2 3156 3220 -52 365 235 0 0 chr17 32571343 32571411 -52867069 - MIR SINE MIR -88 174 107 213 237 0 0 chr17 32571503 32571562 -52866918 + (TGGA)n Simple_repeat Simple_repeat 1 59 0 338 237 29 12 chr17 32571621 32571794 -52866686 + (TGGA)n Simple_repeat Simple_repeat 1 176 0 418 279 130 7 chr17 32572366 32572520 -52865960 - MIR3 SINE MIR -3 205 33 420 285 44 37 chr17 32573071 32573277 -52865203 - MIR SINE MIR -48 214 2 297 289 103 53 chr17 32573525 32573788 -52864692 + L2 LINE L2 2878 3153 -119 267 278 53 23 chr17 32574233 32574366 -52864114 + MIR3 SINE MIR 44 180 -28 472 212 60 33 chr17 32574508 32574659 -52863821 - MIR SINE MIR -1 261 107 186 43 0 0 chr17 32574931 32574954 -52863526 + (GGGA)n Simple_repeat Simple_repeat 2 24 0 208 366 10 0 chr17 32575088 32575189 -52863291 + MIR3 SINE MIR 62 163 -45 192 250 118 0 chr17 32577291 32577367 -52861113 + L2 LINE L2 3187 3271 -1 272 258 16 0 chr17 32577659 32577721 -52860759 + MIR SINE MIR 112 174 -88 326 250 17 136 chr17 32578404 32578580 -52859900 - MER5B DNA MER1_type -15 163 9 195 219 0 0 chr17 32578622 32578663 -52859817 - L2 LINE L2 -3 3269 3229 513 285 22 22 chr17 32578861 32579040 -52859440 - MIR SINE MIR -6 256 78 264 284 274 0 chr17 32580078 32580180 -52858300 - L2 LINE L2 0 3272 3143 2369 99 0 3 chr17 32582957 32583260 -52855220 + AluSx SINE Alu 1 302 -10 312 247 54 11 chr17 32584325 32584418 -52854062 - L2 LINE L2 -28 3285 3189 318 224 215 0 chr17 32584541 32584648 -52853832 + MIR SINE MIR 21 150 -58 1850 109 148 42 chr17 32584651 32584855 -52853625 - MSTA LTR MaLR -2 426 245 2402 86 0 0 chr17 32584855 32585147 -52853333 - AluSg SINE Alu -18 292 1 1850 109 148 42 chr17 32585147 32585327 -52853153 - MSTA LTR MaLR -183 245 1 574 309 26 10 chr17 32585331 32585525 -52852955 - L2 LINE L2 0 3313 3117 228 158 0 0 chr17 32585535 32585573 -52852907 + L1MC/D LINE L1 5713 5750 -492 323 313 89 41 chr17 32585574 32585820 -52852660 - L2 LINE L2 -420 2894 2637 1523 241 131 22 chr17 32585822 32586564 -52851916 + L1ME3 LINE L1 5323 6153 -9 1062 109 0 7 chr17 32586721 32586868 -52851612 + AluJb SINE Alu 164 309 -3 1795 121 62 49 chr17 32586900 32587207 -52851273 + AluJo SINE Alu 1 311 -1 289 282 107 47 chr17 32587250 32587449 -52851031 + MIR SINE MIR 32 261 -1 229 262 24 0 chr17 32587527 32587547 -52850933 - HAL1b LINE L1 -30 1318 1299 330 181 38 95 chr17 32587547 32587652 -52850828 - L1ME4a LINE L1 -60 6061 1233 315 228 0 30 chr17 32587671 32587772 -52850708 - HAL1b LINE L1 0 1348 1251 288 304 0 38 chr17 32588959 32589038 -52849442 - MIR SINE MIR -70 192 117 933 234 21 11 chr17 32589045 32589331 -52849149 + MER33 DNA MER1_type 1 289 -35 2001 160 0 3 chr17 32589402 32589696 -52848784 + AluJb SINE Alu 1 293 -19 830 184 119 0 chr17 32589696 32589881 -52848599 - MER58A DNA MER1_type -17 207 1 339 333 70 0 chr17 32589901 32590030 -52848450 + MIR SINE MIR 8 145 -117 1756 239 60 34 chr17 32590030 32590643 -52847837 + L1ME4a LINE L1 5306 5961 -160 2338 78 4 0 chr17 32590643 32590946 -52847534 + AluSp SINE Alu 1 304 0 1756 239 60 34 chr17 32590946 32591108 -52847372 + L1ME4a LINE L1 5961 6117 -4 507 321 113 50 chr17 32591137 32591616 -52846864 + L1ME LINE L1 5310 5818 -303 627 237 79 75 chr17 32591851 32592020 -52846460 + MIR SINE MIR 16 188 -74 1947 140 50 0 chr17 32592020 32592299 -52846181 + AluSx SINE Alu 1 293 -19 627 237 79 75 chr17 32592299 32592357 -52846123 + MIR SINE MIR 188 244 -18 415 280 172 11 chr17 32592570 32592756 -52845724 + MIR SINE MIR 31 246 -16 437 301 45 46 chr17 32592985 32593185 -52845295 + MIR SINE MIR 3 200 -62 2399 108 0 0 chr17 32593446 32593751 -52844729 + AluSx SINE Alu 1 305 -7 202 244 0 0 chr17 32593771 32593816 -52844664 + (TAA)n Simple_repeat Simple_repeat 2 46 0 581 274 72 24 chr17 32593819 32594027 -52844453 - MIR SINE MIR -32 230 13 232 283 0 0 chr17 32595212 32595285 -52843195 + C-rich Low_complexity Low_complexity 1 73 0 238 304 74 15 chr17 32597874 32598009 -52840471 - MIR SINE MIR -7 255 113 201 213 0 0 chr17 32598556 32598603 -52839877 + (TG)n Simple_repeat Simple_repeat 2 48 0 249 372 53 18 chr17 32599757 32599983 -52838497 - L2 LINE L2 -212 3060 2827 1077 275 0 26 chr17 32600749 32601018 -52837462 - MIR SINE MIR 0 262 1 380 263 197 0 chr17 32601280 32601417 -52837063 + MIR3 SINE MIR 19 182 -26 297 273 0 0 chr17 32601417 32601483 -52836997 + MIR3 SINE MIR 129 194 -14 646 268 0 18 chr17 32601487 32601655 -52836825 + MER5B DNA MER1_type 2 166 -12 244 247 96 0 chr17 32602918 32602991 -52835489 + MIR SINE MIR 112 191 -71 26 93 0 0 chr17 32603053 32603128 -52835352 + AT_rich Low_complexity Low_complexity 1 75 0 203 321 0 46 chr17 32603604 32603735 -52834745 + CT-rich Low_complexity Low_complexity 3 127 0 438 110 25 42 chr17 32603759 32603877 -52834603 + CT-rich Low_complexity Low_complexity 1 116 0 331 248 53 110 chr17 32604189 32604395 -52834085 + MIR SINE MIR 16 210 -52 2122 104 0 24 chr17 32604569 32604887 -52833593 + AluSg SINE Alu 2 312 0 455 279 7 15 chr17 32604919 32605055 -52833425 - MIR SINE MIR -117 145 11 414 201 60 60 chr17 32606513 32606541 -52831939 + L2 LINE L2 3178 3205 -108 2359 99 3 3 chr17 32606541 32606844 -52831636 + AluSp SINE Alu 1 303 -10 414 201 60 60 chr17 32606844 32606949 -52831531 + L2 LINE L2 3204 3311 -2 276 238 43 162 chr17 32606980 32607165 -52831315 - MIR SINE MIR -93 169 7 779 121 0 24 chr17 32607416 32607540 -52830940 + FLAM_C SINE Alu 1 121 -12 22 56 0 0 chr17 32607547 32607583 -52830897 + AT_rich Low_complexity Low_complexity 1 36 0 258 226 75 0 chr17 32607742 32607795 -52830685 - MIR SINE MIR -87 175 119 495 265 45 58 chr17 32607811 32608034 -52830446 - L2 LINE L2 -1 3312 3093 206 189 0 19 chr17 32608131 32608184 -52830296 + GA-rich Low_complexity Low_complexity 4 55 0 549 316 11 37 chr17 32608416 32608633 -52829847 + MIR SINE MIR 3 212 -50 560 254 146 0 chr17 32609494 32609659 -52828821 + MER5A DNA MER1_type 1 189 0 263 320 82 8 chr17 32610756 32610878 -52827602 - L2 LINE L2 -9 3263 3133 421 301 110 38 chr17 32610923 32611159 -52827321 + MIR SINE MIR 9 261 -1 591 249 30 24 chr17 32611822 32611987 -52826493 + MIR SINE MIR 20 185 -77 255 306 59 0 chr17 32612053 32612101 -52826379 - L2 LINE L2 -34 3279 3235 2498 100 0 0 chr17 32612101 32612412 -52826068 + AluSx SINE Alu 1 311 -1 255 306 59 0 chr17 32612412 32612448 -52826032 - L2 LINE L2 -78 3235 3190 228 304 161 18 chr17 32612510 32612678 -52825802 - L3 LINE CR1 -81 1496 1305 397 204 71 0 chr17 32612891 32613004 -52825476 + LTR16C LTR ERVL 371 491 0 180 268 49 24 chr17 32614582 32614664 -52823816 - MIR SINE MIR -80 128 45 294 120 0 20 chr17 32614894 32614944 -52823536 + MLT1K LTR MaLR 510 558 -30 386 346 26 6 chr17 32615046 32615202 -52823278 - MIR3 SINE MIR -48 160 2 896 301 75 27 chr17 32616055 32616390 -52822090 + MLT1I LTR MaLR 59 409 0 208 255 59 111 chr17 32616440 32616896 -52821584 + MER5A DNA MER1_type 2 146 -43 251 339 61 42 chr17 32616477 32616519 -52821961 - MER5A DNA MER1_type -21 168 128 2267 122 3 0 chr17 32616519 32616823 -52821657 - AluSx SINE Alu -7 305 1 251 339 61 42 chr17 32616823 32616945 -52821535 - MER5A DNA MER1_type -61 128 1 220 229 0 0 chr17 32617304 32617352 -52821128 + A-rich Low_complexity Low_complexity 1 48 0 840 129 0 168 chr17 32618348 32618580 -52819900 - 7SK RNA RNA 0 193 1 2696 47 0 0 chr17 32619028 32619327 -52819153 + AluY SINE Alu 1 299 -12 545 271 73 26 chr17 32619654 32619846 -52818634 + MIR SINE MIR 10 210 -52 279 331 38 54 chr17 32621606 32621843 -52816637 + MIR SINE MIR 8 242 -20 208 222 0 48 chr17 32621845 32621908 -52816572 + L2 LINE L2 3201 3260 -12 2275 116 0 0 chr17 32621910 32622211 -52816269 + AluSx SINE Alu 1 301 -11 210 309 0 29 chr17 32622387 32622455 -52816025 - MIR SINE MIR -116 146 81 3978 82 12 21 chr17 32622472 32622896 -52815584 + MER41A LTR ERV1 1 420 -134 2458 77 7 0 chr17 32622896 32623195 -52815285 - AluSp SINE Alu -12 301 1 3978 82 12 21 chr17 32623195 32623329 -52815151 + MER41A LTR ERV1 420 554 0 522 326 63 17 chr17 32623418 32623657 -52814823 - MIR SINE MIR -1 261 12 356 319 61 57 chr17 32624084 32624313 -52814167 + MIR SINE MIR 24 253 -9 270 160 0 0 chr17 32624320 32624370 -52814110 + CT-rich Low_complexity Low_complexity 1 50 0 298 318 75 0 chr17 32624661 32624808 -52813672 - MIR3 SINE MIR -12 196 36 343 263 40 0 chr17 32625519 32625618 -52812862 - MER5B DNA MER1_type 0 178 76 1176 209 134 73 chr17 32625618 32625713 -52812767 - MLT1F1 LTR MaLR -7 535 447 2705 87 37 15 chr17 32625713 32626072 -52812408 - L1PB1 LINE L1 0 6151 5801 252 0 0 0 chr17 32626072 32626100 -52812380 + (TG)n Simple_repeat Simple_repeat 2 29 0 189 0 0 0 chr17 32626099 32626120 -52812360 + (TA)n Simple_repeat Simple_repeat 2 22 0 * 2705 87 37 15 chr17 32626100 32626163 -52812317 - L1PB1 LINE L1 -350 5801 5740 1176 209 134 73 chr17 32626163 32626573 -52811907 - MLT1F1 LTR MaLR -95 447 1 385 208 13 0 chr17 32626578 32626655 -52811825 - MER5B DNA MER1_type -100 78 1 2170 131 0 0 chr17 32627065 32627377 -52811103 - AluSx SINE Alu 0 312 1 213 226 0 0 chr17 32627379 32627432 -52811048 + CT-rich Low_complexity Low_complexity 2 54 0 198 219 0 0 chr17 32627872 32627936 -52810544 + CT-rich Low_complexity Low_complexity 1 64 0 21 0 0 0 chr17 32628360 32628381 -52810099 + AT_rich Low_complexity Low_complexity 1 21 0 409 282 267 0 chr17 32629189 32629384 -52809096 + MIR SINE MIR 13 259 -3 439 319 49 49 chr17 32629436 32629662 -52808818 - MIR SINE MIR -17 245 20 214 67 44 44 chr17 32629784 32629829 -52808651 + GA-rich Low_complexity Low_complexity 4 48 0 1058 171 11 0 chr17 32629950 32630125 -52808355 + AluSg/x SINE Alu 135 311 -1 251 229 0 16 chr17 32630125 32630186 -52808294 + GA-rich Low_complexity Low_complexity 1 60 0 366 302 31 31 chr17 32630226 32630355 -52808125 + L1ME3A LINE L1 6037 6165 -5 330 143 18 0 chr17 32630368 32630424 -52808056 + L1MB7 LINE L1 6128 6184 0 2127 117 3 0 chr17 32630946 32631245 -52807235 - AluSq SINE Alu -13 300 1 1891 155 0 0 chr17 32631254 32631550 -52806930 - AluJo SINE Alu -15 297 2 411 286 8 0 chr17 32631728 32631847 -52806633 - MER103 DNA DNA -44 122 3 587 299 108 5 chr17 32631919 32632089 -52806391 + MIR SINE MIR 21 219 -43 2024 116 3 0 chr17 32632089 32632373 -52806107 + AluSx SINE Alu 1 285 -27 587 299 108 5 chr17 32632373 32632416 -52806064 + MIR SINE MIR 219 256 -6 733 256 64 39 chr17 32632625 32632859 -52805621 + MIR SINE MIR 23 262 0 2623 153 5 21 chr17 32633093 32633524 -52804956 - MSTB LTR MaLR -2 424 1 194 328 156 16 chr17 32633680 32633808 -52804672 - MIR SINE MIR -115 147 2 197 354 38 32 chr17 32635233 32635391 -52803089 - L2 LINE L2 -466 2848 2690 978 292 8 4 chr17 32635875 32636115 -52802365 + MIR SINE MIR 16 256 -6 189 307 44 88 chr17 32636097 32636117 -52802363 - L2 LINE L2 -8 3305 3286 * 2423 69 0 0 chr17 32636117 32636421 -52802059 - AluY SINE Alu -7 304 1 189 307 44 88 chr17 32636421 32636514 -52801966 - L2 LINE L2 -27 3286 3197 220 319 138 0 chr17 32636715 32636831 -52801649 + L2 LINE L2 2929 3060 -212 835 161 0 15 chr17 32637299 32637614 -52800866 + FLAM_C SINE Alu 2 314 0 369 317 83 0 chr17 32637949 32638094 -52800386 + MIR SINE MIR 20 176 -86 2062 102 0 11 chr17 32638216 32638529 -52799951 - AluSc SINE Alu 0 310 1 219 295 0 0 chr17 32638705 32638817 -52799663 + (TG)n Simple_repeat Simple_repeat 2 113 0 516 356 0 0 chr17 32638852 32639026 -52799454 + (TG)n Simple_repeat Simple_repeat 1 174 0 183 257 0 0 chr17 32639041 32639115 -52799365 + (TG)n Simple_repeat Simple_repeat 2 75 0 230 298 0 36 chr17 32639122 32639206 -52799274 + GA-rich Low_complexity Low_complexity 4 84 0 508 285 14 0 chr17 32639738 32639882 -52798598 + MIR3 SINE MIR 63 208 0 398 261 123 0 chr17 32640553 32640683 -52797797 + MIR SINE MIR 113 258 -4 347 362 90 1 chr17 32641288 32641456 -52797024 + MIR SINE MIR 8 188 -62 982 185 21 5 chr17 32641960 32642149 -52796331 - AluJb SINE Alu -17 295 104 251 298 65 6 chr17 32642244 32642410 -52796070 + MIR SINE MIR 23 196 -62 224 265 0 0 chr17 32642960 32643022 -52795458 + C-rich Low_complexity Low_complexity 1 62 0 680 204 0 6 chr17 32643260 32643432 -52795048 + (TG)n Simple_repeat Simple_repeat 1 171 0 196 274 0 0 chr17 32644179 32644230 -52794250 + L2 LINE L2 3139 3189 -83 318 290 120 43 chr17 32644333 32644526 -52793954 + MIR SINE MIR 32 250 -12 297 0 0 0 chr17 32644638 32644671 -52793809 + (CA)n Simple_repeat Simple_repeat 2 34 0 1558 169 32 14 chr17 32645513 32645617 -52792863 + AluJb SINE Alu 16 117 -195 207 0 0 0 chr17 32645617 32645640 -52792840 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1558 169 32 14 chr17 32645640 32645819 -52792661 + AluJb SINE Alu 117 304 -8 403 323 41 10 chr17 32645823 32646018 -52792462 - MIR SINE MIR -56 206 6 495 229 171 7 chr17 32646033 32646173 -52792307 - L1M4 LINE L1 -1043 5103 4941 295 264 16 16 chr17 32646605 32646734 -52791746 + (TG)n Simple_repeat Simple_repeat 1 129 0 231 191 0 0 chr17 32646979 32647021 -52791459 + C-rich Low_complexity Low_complexity 3 44 0 393 305 136 0 chr17 32647625 32647779 -52790701 + MER91A DNA MER1_type 2 176 -20 206 171 24 0 chr17 32647828 32647869 -52790611 + MER91A DNA MER1_type 149 190 0 1861 121 29 0 chr17 32647937 32648303 -52790177 + AluSg SINE Alu 1 374 0 1767 184 26 0 chr17 32648312 32648721 -52789759 + AluJb SINE Alu 1 417 0 238 146 18 18 chr17 32648829 32648884 -52789596 + CT-rich Low_complexity Low_complexity 2 56 0 312 27 0 0 chr17 32648884 32648921 -52789559 + (CA)n Simple_repeat Simple_repeat 1 37 0 424 260 130 18 chr17 32649314 32649537 -52788943 - MIR SINE MIR -3 259 12 784 237 26 11 chr17 32649590 32649801 -52788679 - MIR SINE MIR -15 247 34 330 26 0 0 chr17 32650800 32650839 -52787641 + (CA)n Simple_repeat Simple_repeat 2 40 0 2091 119 0 0 chr17 32651482 32651777 -52786703 + AluSx SINE Alu 1 295 -17 180 326 92 31 chr17 32652323 32652421 -52786059 - MIR SINE MIR -77 131 28 1873 120 46 0 chr17 32652479 32652763 -52785717 + AluJb SINE Alu 1 297 -15 249 250 0 0 chr17 32653721 32653785 -52784695 + (CA)n Simple_repeat Simple_repeat 2 65 0 364 263 38 13 chr17 32653884 32654001 -52784479 + MIR3 SINE MIR 70 193 -15 425 329 7 7 chr17 32654058 32654201 -52784279 + MIR SINE MIR 16 158 -104 189 0 0 0 chr17 32654949 32654970 -52783510 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 186 43 0 0 chr17 32655209 32655232 -52783248 + (GA)n Simple_repeat Simple_repeat 2 24 0 220 143 12 48 chr17 32655336 32655420 -52783060 + GA-rich Low_complexity Low_complexity 1 81 0 359 294 61 31 chr17 32655950 32656113 -52782367 - MIR SINE MIR -82 180 13 329 256 8 85 chr17 32656925 32657054 -52781426 - L2 LINE L2 0 3313 3195 416 233 139 23 chr17 32657607 32657757 -52780723 + MIR SINE MIR 37 197 -65 280 268 0 14 chr17 32657940 32658011 -52780469 + MIR3 SINE MIR 107 176 -32 180 152 0 0 chr17 32658219 32658252 -52780228 + (CCA)n Simple_repeat Simple_repeat 1 33 0 1602 110 25 4 chr17 32659974 32660219 -52778261 + AluSx SINE Alu 63 312 0 2609 165 50 20 chr17 32660233 32660729 -52777751 + L1MB8 LINE L1 5668 6178 0 1099 230 36 0 chr17 32660732 32661014 -52777466 + L1MB7 LINE L1 5864 6184 0 669 130 106 0 chr17 32661014 32661137 -52777343 - MER5A DNA MER1_type -53 136 1 255 212 91 30 chr17 32662378 32662444 -52776036 + L2 LINE L2 3153 3222 -50 183 80 0 0 chr17 32662464 32662489 -52775991 + (ATG)n Simple_repeat Simple_repeat 3 27 0 424 276 5 82 chr17 32662494 32662557 -52775923 - MIR SINE MIR -10 252 186 2210 117 0 0 chr17 32662557 32662866 -52775614 - AluSg SINE Alu -1 309 1 424 276 5 82 chr17 32662866 32662998 -52775482 - MIR SINE MIR -76 186 72 197 309 65 50 chr17 32663585 32663724 -52774756 - MIR3 SINE MIR -10 198 58 195 268 71 0 chr17 32663860 32663916 -52774564 - MIR SINE MIR -97 165 106 1701 168 3 3 chr17 32664382 32664679 -52773801 + AluJb SINE Alu 1 297 -15 309 252 148 9 chr17 32664780 32664895 -52773585 + L1ME4a LINE L1 5990 6120 -1 954 205 0 0 chr17 32664903 32665069 -52773411 - FRAM SINE Alu 0 166 1 388 300 23 0 chr17 32666201 32666339 -52772141 + L1ME LINE L1 5677 5818 -303 672 162 29 6 chr17 32667224 32667397 -52771083 + CT-rich Low_complexity Low_complexity 3 179 0 989 87 0 0 chr17 32668774 32668900 -52769580 + AluSq/x SINE Alu 23 148 -165 298 256 150 15 chr17 32669316 32669449 -52769031 - MIR SINE MIR -44 218 68 320 270 16 71 chr17 32669608 32669734 -52768746 - MIR SINE MIR -60 202 84 405 314 66 15 chr17 32669784 32669921 -52768559 - MIR SINE MIR -23 239 96 232 263 0 0 chr17 32670014 32670071 -52768409 + L2 LINE L2 3207 3263 -9 332 59 20 0 chr17 32671935 32671986 -52766494 + (TC)n Simple_repeat Simple_repeat 1 52 0 520 298 162 5 chr17 32672035 32672226 -52766254 + MIR SINE MIR 35 255 -7 770 168 24 0 chr17 32672620 32672745 -52765735 + FLAM_C SINE Alu 2 129 -14 186 372 44 7 chr17 32672751 32672888 -52765592 + MIR SINE MIR 121 262 0 2059 116 23 7 chr17 32672931 32673234 -52765246 + AluSx SINE Alu 1 308 -4 253 269 65 32 chr17 32673817 32673910 -52764570 - MIR SINE MIR -55 207 112 231 295 66 57 chr17 32674034 32674156 -52764324 + MIR3 SINE MIR 5 127 -81 2116 119 10 0 chr17 32674248 32674543 -52763937 + AluSx SINE Alu 1 298 -14 2339 106 10 0 chr17 32675146 32675622 -52762858 + AluSx SINE Alu 1 479 0 206 196 18 18 chr17 32676739 32676795 -52761685 + (CAGAGA)n Simple_repeat Simple_repeat 5 60 0 2430 97 0 0 chr17 32678337 32678637 -52759843 - AluSx SINE Alu -12 300 1 280 287 29 0 chr17 32678908 32679044 -52759436 + (CA)n Simple_repeat Simple_repeat 1 140 0 296 331 69 7 chr17 32679845 32679990 -52758490 - MIR SINE MIR -89 173 20 558 258 169 31 chr17 32680267 32680593 -52757887 - L3 LINE CR1 -24 1553 1183 4859 170 18 12 chr17 32680657 32681246 -52757234 + L1MB2 LINE L1 5073 5676 -495 2291 112 20 0 chr17 32681246 32681541 -52756939 - AluSx SINE Alu -11 301 1 4859 170 18 12 chr17 32681541 32682003 -52756477 + L1MB2 LINE L1 5676 6134 -37 481 268 109 0 chr17 32682007 32682145 -52756335 + MIR SINE MIR 20 172 -90 570 225 390 22 chr17 32682298 32682654 -52755826 + L2 LINE L2 2821 3307 -6 2344 89 0 10 chr17 32683231 32683533 -52754947 + AluSx SINE Alu 1 299 -13 324 260 91 45 chr17 32683579 32683733 -52754747 - MIR SINE MIR -63 199 39 1698 128 54 37 chr17 32683909 32684206 -52754274 + AluJo SINE Alu 9 310 -2 187 352 14 0 chr17 32684714 32684785 -52753695 - L2 LINE L2 0 3313 3242 2271 86 18 0 chr17 32684900 32685213 -52753267 - AluSx SINE Alu 0 318 1 2397 82 7 0 chr17 32685252 32685545 -52752935 - AluSp SINE Alu -15 298 4 291 263 306 0 chr17 32686144 32686304 -52752176 - MIR SINE MIR -3 259 51 231 114 0 0 chr17 32686819 32686854 -52751626 + (CAT)n Simple_repeat Simple_repeat 3 37 0 738 184 17 56 chr17 32686860 32687039 -52751441 - MIR SINE MIR -3 259 88 700 280 17 34 chr17 32688073 32688312 -52750168 - MIR SINE MIR -20 242 8 1758 204 99 41 chr17 32688941 32689425 -52749055 - MLT2B1 LTR ERVL -8 512 1 328 292 34 39 chr17 32689754 32689811 -52748669 - MER5B DNA MER1_type 0 178 122 2324 109 0 3 chr17 32689811 32690114 -52748366 + AluSx SINE Alu 1 302 -10 328 292 34 39 chr17 32690114 32690234 -52748246 - MER5B DNA MER1_type -56 122 2 2588 54 0 0 chr17 32690394 32690691 -52747789 + AluY SINE Alu 1 297 -14 2075 104 11 18 chr17 32690714 32690994 -52747486 + AluSx SINE Alu 14 291 -21 308 281 180 24 chr17 32691105 32691272 -52747208 - MIR SINE MIR -13 249 57 983 184 32 5 chr17 32691299 32691489 -52746991 + MER20 DNA MER1_type 17 211 -8 421 245 101 0 chr17 32691505 32691664 -52746816 + MER5B DNA MER1_type 3 177 -1 245 135 0 0 chr17 32691978 32692015 -52746465 - MIR SINE MIR -71 191 155 1874 159 7 10 chr17 32693287 32693588 -52744892 - AluJb SINE Alu -9 303 4 1625 138 86 52 chr17 32693623 32693717 -52744763 + AluSx SINE Alu 1 90 -222 2454 84 3 3 chr17 32693717 32694025 -52744455 + AluSp SINE Alu 3 310 -3 2292 83 3 26 chr17 32694025 32694327 -52744153 + AluSx SINE Alu 3 297 -15 1625 138 86 52 chr17 32694327 32694521 -52743959 + AluSx SINE Alu 89 300 -12 369 227 55 55 chr17 32694584 32694694 -52743786 - L2 LINE L2 0 3313 3204 1849 250 176 60 chr17 32694694 32695275 -52743205 - L2 LINE L2 -252 3061 2549 197 65 32 0 chr17 32695275 32695306 -52743174 + (CAA)n Simple_repeat Simple_repeat 3 34 0 1849 250 176 60 chr17 32695306 32695462 -52743018 - L2 LINE L2 -764 2549 2413 1534 156 14 78 chr17 32695462 32695757 -52742723 + AluJo SINE Alu 1 276 -36 207 0 0 0 chr17 32695759 32695782 -52742698 + (TC)n Simple_repeat Simple_repeat 2 24 0 2363 105 0 0 chr17 32695782 32696078 -52742402 - AluSq SINE Alu -17 296 1 1849 250 176 60 chr17 32696078 32696123 -52742357 - L2 LINE L2 -900 2413 2375 2144 111 17 0 chr17 32696123 32696411 -52742069 - AluY SINE Alu -18 293 1 1849 250 176 60 chr17 32696411 32696739 -52741741 - L2 LINE L2 -938 2375 1816 496 285 130 16 chr17 32696744 32696990 -52741490 - L2 LINE L2 -1639 1675 1402 950 128 147 92 chr17 32697099 32697237 -52741243 + MER33 DNA MER1_type 2 131 -2454 1894 151 18 0 chr17 32697237 32697521 -52740959 + AluSq SINE Alu 1 289 -24 950 128 147 92 chr17 32697521 32697688 -52740792 + MER33 DNA MER1_type 131 324 0 275 330 80 0 chr17 32701505 32701605 -52736875 - MIR SINE MIR -58 150 43 225 367 37 9 chr17 32702540 32702649 -52735831 - MIR SINE MIR -80 182 71 332 264 35 0 chr17 32703905 32703992 -52734488 - MIR3 SINE MIR -5 203 114 326 220 211 9 chr17 32704309 32704418 -52734062 - L2 LINE L2 -1 3312 3182 498 240 111 65 chr17 32704421 32704476 -52734004 + MER102b DNA MER1_type 113 164 -1264 2182 94 7 20 chr17 32704476 32704773 -52733707 + AluSc SINE Alu 1 293 -16 498 240 111 65 chr17 32704773 32704934 -52733546 + MER102b DNA MER1_type 164 339 -2 225 298 0 0 chr17 32704973 32705030 -52733450 - MIR SINE MIR -131 131 75 2270 121 0 10 chr17 32705213 32705527 -52732953 + AluSx SINE Alu 1 311 -1 1848 114 76 4 chr17 32706220 32706510 -52731970 + AluSx SINE Alu 1 309 0 28 0 0 0 chr17 32709117 32709145 -52729335 + GC_rich Low_complexity Low_complexity 1 28 0 266 242 200 8 chr17 32709667 32709787 -52728693 - MIR SINE MIR 0 262 120 23 33 0 0 chr17 32711098 32711128 -52727352 + AT_rich Low_complexity Low_complexity 1 30 0 1067 113 19 25 chr17 32712178 32712338 -52726142 + AluSg/x SINE Alu 144 302 -10 2375 83 10 0 chr17 32712379 32712680 -52725800 + AluSp SINE Alu 1 304 -9 2321 101 0 0 chr17 32713041 32713328 -52725152 - AluSc SINE Alu -22 287 1 403 281 0 0 chr17 32713370 32713459 -52725021 + Tigger5 DNA MER2_type 2234 2322 -1 21 36 0 0 chr17 32713988 32714016 -52724464 + AT_rich Low_complexity Low_complexity 1 28 0 2139 138 0 0 chr17 32714016 32714305 -52724175 + AluSx SINE Alu 1 289 -23 225 337 43 0 chr17 32714371 32714463 -52724017 - MIR SINE MIR -14 248 153 2579 169 84 52 chr17 32715700 32715960 -52722520 + Charlie1a DNA MER1_type 67 317 -2444 1828 155 16 30 chr17 32715960 32716264 -52722216 - AluJo SINE Alu -8 304 5 2579 169 84 52 chr17 32716264 32716297 -52722183 + Charlie1a DNA MER1_type 317 347 -2414 2129 129 0 0 chr17 32716297 32716591 -52721889 + AluSx SINE Alu 1 294 -18 2579 169 84 52 chr17 32716591 32717172 -52721308 + Charlie1a DNA MER1_type 347 908 -1853 1904 156 0 14 chr17 32717172 32717467 -52721013 + AluSx SINE Alu 1 291 -21 2579 169 84 52 chr17 32717467 32717584 -52720896 + Charlie1a DNA MER1_type 908 1020 -1741 2522 62 0 0 chr17 32717584 32717872 -52720608 + AluSc SINE Alu 2 289 -20 2579 169 84 52 chr17 32717872 32718151 -52720329 + Charlie1a DNA MER1_type 1020 1454 -1 871 149 43 12 chr17 32718376 32718537 -52719943 - MER2 DNA MER2_type 0 345 180 1152 114 13 0 chr17 32718537 32718695 -52719785 - AluSg/x SINE Alu -16 296 137 1016 141 31 52 chr17 32718696 32718756 -52719724 - MER2 DNA MER2_type -158 187 127 1820 181 0 3 chr17 32718756 32719049 -52719431 + AluJb SINE Alu 1 292 -20 1016 141 31 52 chr17 32719049 32719179 -52719301 - MER2 DNA MER2_type -218 127 1 35 0 0 0 chr17 32719182 32719217 -52719263 + AT_rich Low_complexity Low_complexity 1 35 0 713 133 0 17 chr17 32719217 32719337 -52719143 - FLAM_C SINE Alu -15 118 1 2586 60 0 3 chr17 32719632 32719932 -52718548 - AluY SINE Alu -12 299 1 2150 136 3 0 chr17 32720002 32720297 -52718183 - AluSx SINE Alu -16 296 1 2501 76 0 16 chr17 32720423 32720737 -52717743 + AluY SINE Alu 1 309 -2 2488 93 3 0 chr17 32720894 32721206 -52717274 - AluSq SINE Alu 0 313 1 372 310 100 61 chr17 32723835 32724145 -52714335 + L2 LINE L2 2155 2476 -838 327 190 17 0 chr17 32724255 32724313 -52714167 - L1MCa LINE L1 -4362 2064 2006 252 0 0 0 chr17 32724313 32724341 -52714139 + (CA)n Simple_repeat Simple_repeat 1 28 0 2402 92 0 6 chr17 32724355 32724669 -52713811 - AluSx SINE Alu 0 312 1 2288 78 4 0 chr17 32724807 32725088 -52713392 + AluSp SINE Alu 1 282 -31 213 0 36 0 chr17 32725088 32725116 -52713364 + (CAAAA)n Simple_repeat Simple_repeat 1 80 0 2145 128 0 3 chr17 32725168 32725464 -52713016 - AluSx SINE Alu -17 295 1 2275 90 0 0 chr17 32725573 32725872 -52712608 + AluSq SINE Alu 1 299 -14 360 0 0 0 chr17 32725872 32725912 -52712568 + (TA)n Simple_repeat Simple_repeat 2 41 0 666 158 24 36 chr17 32726014 32726179 -52712301 + L1MB1 LINE L1 4974 5136 -1010 198 143 0 0 chr17 32726291 32726326 -52712154 + (CTGGGG)n Simple_repeat Simple_repeat 6 40 0 633 135 58 0 chr17 32727123 32727227 -52711253 - Tigger3(Golem) DNA MER2_type -1 3028 2919 22 0 0 0 chr17 32727228 32727250 -52711230 + AT_rich Low_complexity Low_complexity 1 22 0 481 215 0 0 chr17 32727325 32727404 -52711076 - Tigger3(Golem) DNA MER2_type -2949 80 2 711 188 57 11 chr17 32727405 32727581 -52710899 + L1MB1 LINE L1 5146 5329 -817 405 119 45 0 chr17 32727581 32727648 -52710832 + AluJ/FRAM SINE Alu 228 297 -5 3687 139 40 101 chr17 32727660 32728137 -52710343 + L1MB1 LINE L1 5316 5716 -452 2031 98 7 0 chr17 32728137 32728414 -52710066 + AluSx SINE Alu 25 303 -9 3687 139 40 101 chr17 32728414 32728820 -52709660 + L1MB1 LINE L1 5716 6145 -23 1505 157 0 19 chr17 32728826 32729088 -52709392 - AluJb SINE Alu -24 288 32 1584 144 16 77 chr17 32729464 32729653 -52708827 - AluJo SINE Alu -19 293 94 2280 80 0 6 chr17 32729653 32729966 -52708514 - AluY SINE Alu 0 311 1 1961 115 10 3 chr17 32729968 32730256 -52708224 - AluSg SINE Alu -20 290 1 1584 144 16 77 chr17 32730256 32730375 -52708105 - AluJo SINE Alu -219 93 1 329 95 0 0 chr17 32730435 32730477 -52708003 + U2 snRNA snRNA 1 42 -146 2005 128 3 0 chr17 32730497 32730787 -52707693 - AluSx SINE Alu -21 291 1 2194 109 0 10 chr17 32730797 32731108 -52707372 - AluSq SINE Alu -5 308 1 1494 186 3 35 chr17 32731113 32731430 -52707050 - AluJb SINE Alu -5 307 1 192 257 71 14 chr17 32731430 32731500 -52706980 - MIR SINE MIR -114 148 75 1822 136 31 0 chr17 32732110 32732396 -52706084 - AluSx SINE Alu -17 295 1 1976 128 3 0 chr17 32732473 32732769 -52705711 + AluSc SINE Alu 1 297 -12 2047 117 10 0 chr17 32732932 32733230 -52705250 + AluSx SINE Alu 1 301 -11 2176 103 0 0 chr17 32733302 32733594 -52704886 + AluSc SINE Alu 1 292 -17 778 163 0 22 chr17 32734506 32734641 -52703839 - FLAM_C SINE Alu 0 133 2 1634 133 6 73 chr17 32734832 32735148 -52703332 - AluJo SINE Alu -17 295 1 2214 90 0 0 chr17 32735620 32735910 -52702570 - AluSg SINE Alu -20 290 1 518 262 193 13 chr17 32736247 32736480 -52702000 + L2 LINE L2 1824 2098 -1216 29 0 0 0 chr17 32737437 32737466 -52701014 + AT_rich Low_complexity Low_complexity 1 29 0 2205 88 3 25 chr17 32737481 32737800 -52700680 + AluSx SINE Alu 1 312 0 415 257 107 34 chr17 32737872 32738226 -52700254 + L1MC5 LINE L1 7538 7917 -44 2078 113 0 0 chr17 32738229 32738542 -52699938 - AluSq SINE Alu 0 313 1 2167 101 37 0 chr17 32738542 32738840 -52699640 - AluSg SINE Alu -1 309 1 1962 134 3 7 chr17 32739056 32739362 -52699118 + AluSx SINE Alu 1 305 -7 2237 85 3 0 chr17 32739602 32739907 -52698573 + AluY SINE Alu 1 306 -5 2120 107 7 0 chr17 32740103 32740402 -52698078 + AluSx SINE Alu 1 301 -11 22 35 0 0 chr17 32740427 32740456 -52698024 + AT_rich Low_complexity Low_complexity 1 29 0 706 211 0 15 chr17 32740976 32741109 -52697371 + FLAM_A SINE Alu 2 132 -1 248 277 0 15 chr17 32741201 32741266 -52697214 + L2 LINE L2 2483 2546 -768 785 201 0 8 chr17 32741268 32741402 -52697078 + AluJo SINE Alu 2 134 -178 1670 124 66 15 chr17 32741404 32741677 -52696803 + AluSg SINE Alu 1 287 -23 916 256 42 45 chr17 32741719 32742031 -52696449 + L2 LINE L2 2537 2847 -467 1101 255 247 29 chr17 32742058 32742200 -52696280 + L2 LINE L2 2235 2345 -968 2130 104 10 0 chr17 32742200 32742507 -52695973 - AluSx SINE Alu -2 310 1 1101 255 247 29 chr17 32742507 32742769 -52695711 + L2 LINE L2 2345 2548 -765 2024 108 3 3 chr17 32742769 32743064 -52695416 + AluSq SINE Alu 1 295 -18 1101 255 247 29 chr17 32743064 32743086 -52695394 + L2 LINE L2 2548 2564 -749 2133 104 3 3 chr17 32743086 32743393 -52695087 - AluSq SINE Alu -6 307 1 2168 98 0 0 chr17 32743397 32743693 -52694787 - AluSg SINE Alu -14 296 1 1101 255 247 29 chr17 32743693 32744020 -52694460 + L2 LINE L2 2566 3174 -139 252 0 0 0 chr17 32744744 32744772 -52693708 + (A)n Simple_repeat Simple_repeat 1 28 0 2267 90 0 10 chr17 32744790 32745100 -52693380 - AluSc SINE Alu -2 307 1 194 0 39 0 chr17 32745100 32745126 -52693354 + (TTTTG)n Simple_repeat Simple_repeat 1 27 0 1687 128 76 30 chr17 32745580 32745820 -52692660 - MER2 DNA MER2_type 0 344 84 1557 195 0 7 chr17 32745820 32746112 -52692368 - AluJb SINE Alu -22 290 1 1687 128 76 30 chr17 32746112 32746199 -52692281 - MER2 DNA MER2_type -260 84 2 2106 97 6 31 chr17 32746848 32747169 -52691311 + AluSp SINE Alu 1 313 0 1957 106 64 0 chr17 32747196 32747479 -52691001 - AluSx SINE Alu -11 301 1 272 214 152 45 chr17 32747685 32747797 -52690683 - MER104 DNA Tc2 -51 129 6 2117 119 0 3 chr17 32748482 32748785 -52689695 - AluSx SINE Alu -10 302 1 182 273 61 15 chr17 32748941 32749007 -52689473 - MIR SINE MIR -3 259 191 23 0 0 0 chr17 32749153 32749176 -52689304 + AT_rich Low_complexity Low_complexity 1 23 0 1885 108 54 4 chr17 32749684 32749962 -52688518 - AluSx SINE Alu -20 292 1 2063 95 14 3 chr17 32750029 32750314 -52688166 + AluSp SINE Alu 10 297 -16 185 65 32 0 chr17 32751175 32751206 -52687274 + (CAAAAA)n Simple_repeat Simple_repeat 4 35 0 2157 107 0 0 chr17 32751286 32751586 -52686894 + AluSx SINE Alu 1 300 -12 574 234 145 21 chr17 32751593 32751883 -52686597 + L1ME4a LINE L1 5572 5897 -224 2154 94 0 10 chr17 32752018 32752316 -52686164 + AluSx SINE Alu 1 295 -17 1723 153 3 7 chr17 32752568 32752862 -52685618 - AluSx SINE Alu -19 293 1 2346 99 0 0 chr17 32752886 32753199 -52685281 - AluSq SINE Alu 0 313 1 21 36 0 0 chr17 32755682 32755710 -52682770 + GC_rich Low_complexity Low_complexity 1 28 0 269 229 0 21 chr17 32755801 32755897 -52682583 + (CCG)n Simple_repeat Simple_repeat 2 95 0 201 39 0 0 chr17 32756107 32756133 -52682347 + (CCCG)n Simple_repeat Simple_repeat 3 28 0 21 0 0 0 chr17 32756248 32756269 -52682211 + GC_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr17 32756643 32756673 -52681807 + GC_rich Low_complexity Low_complexity 1 30 0 2222 81 0 7 chr17 32757597 32757895 -52680585 + AluSq SINE Alu 1 296 -17 2022 94 14 0 chr17 32758071 32758358 -52680122 + AluSx SINE Alu 1 291 -21 1586 119 0 0 chr17 32758508 32758744 -52679736 + AluSq SINE Alu 1 236 -77 2434 48 0 0 chr17 32758811 32759106 -52679374 - AluY SINE Alu -16 295 1 210 71 0 0 chr17 32759483 32759511 -52678969 + (CTAAT)n Simple_repeat Simple_repeat 3 30 0 201 103 51 0 chr17 32759511 32759550 -52678930 + (CAATA)n Simple_repeat Simple_repeat 5 45 0 1494 58 11 0 chr17 32760279 32760470 -52678010 + AluY SINE Alu 1 193 -118 428 102 0 0 chr17 32760470 32760529 -52677951 + AluY SINE Alu 234 292 -18 2140 114 3 0 chr17 32760854 32761151 -52677329 + AluSx SINE Alu 1 298 -14 592 111 111 0 chr17 32761191 32761281 -52677199 + AluJb SINE Alu 19 118 -194 231 257 95 27 chr17 32761737 32761811 -52676669 + L2 LINE L2 3134 3212 -60 874 127 16 0 chr17 32761906 32762032 -52676448 - FLAM_C SINE Alu -5 128 1 25 51 0 0 chr17 32762074 32762113 -52676367 + AT_rich Low_complexity Low_complexity 1 39 0 1851 118 7 4 chr17 32762402 32762672 -52675808 + AluSx SINE Alu 23 293 -19 2139 93 36 0 chr17 32764593 32764894 -52673586 + AluSx SINE Alu 1 312 0 1112 141 180 12 chr17 32765497 32765753 -52672727 + AluJb SINE Alu 2 300 -2 292 261 33 22 chr17 32767457 32767549 -52670931 - MIR SINE MIR -51 211 119 414 277 80 15 chr17 32768200 32768337 -52670143 - MIR SINE MIR -65 197 52 225 299 30 0 chr17 32769027 32769094 -52669386 - L3b LINE CR1 -190 1393 1325 353 303 42 8 chr17 32769202 32769321 -52669159 - L2 LINE L2 -215 3057 2935 193 253 141 40 chr17 32769524 32769623 -52668857 - L2 LINE L2 -19 3253 3145 243 159 130 0 chr17 32769934 32770003 -52668477 + L1ME4a LINE L1 5999 6076 -45 2291 82 0 3 chr17 32770003 32770306 -52668174 - AluY SINE Alu -9 302 1 781 129 21 57 chr17 32770322 32770462 -52668018 - AluSq/x SINE Alu -177 136 2 2151 125 0 0 chr17 32770498 32770802 -52667678 + AluSx SINE Alu 1 304 -8 1234 39 7 0 chr17 32770812 32770966 -52667514 + AluY SINE Alu 150 304 -7 237 125 100 0 chr17 32771056 32771096 -52667384 - MIR SINE MIR -93 169 126 945 176 31 11 chr17 32771109 32771337 -52667143 - AluJo SINE Alu -26 286 2 860 191 0 0 chr17 32771343 32771495 -52666985 - FRAM SINE Alu -4 172 21 447 307 16 8 chr17 32771498 32771625 -52666855 - MIR SINE MIR -127 135 8 933 180 0 0 chr17 32772103 32772264 -52666216 + FRAM SINE Alu 10 170 -6 736 279 88 9 chr17 32772599 32772825 -52665655 - MIR SINE MIR -10 252 9 2219 92 0 10 chr17 32772885 32773191 -52665289 - AluY SINE Alu -8 303 1 1848 140 48 0 chr17 32774226 32774519 -52663961 - AluSp SINE Alu -6 307 1 2055 118 0 0 chr17 32774522 32774811 -52663669 - AluSx SINE Alu -22 290 2 189 284 49 49 chr17 32775515 32775596 -52662884 + L2 LINE L2 3187 3267 -5 362 184 26 13 chr17 32775635 32775711 -52662769 + MIR SINE MIR 72 148 -114 251 278 35 78 chr17 32776343 32776458 -52662022 + MIR SINE MIR 25 134 -74 349 333 7 52 chr17 32776542 32776695 -52661785 + MIR SINE MIR 97 242 -20 1926 227 124 98 chr17 32777416 32778204 -52660276 - HAL1 LINE L1 -1 2506 1740 2033 130 19 29 chr17 32778204 32778380 -52660100 - AluSq SINE Alu -1 312 139 2562 71 3 0 chr17 32778380 32778690 -52659790 - AluY SINE Alu 0 311 1 2033 130 19 29 chr17 32778690 32778828 -52659652 - AluSq SINE Alu -174 139 1 1926 227 124 98 chr17 32778828 32778882 -52659598 - HAL1 LINE L1 -767 1740 1689 2358 75 7 13 chr17 32778882 32779188 -52659292 - AluSg1 SINE Alu -5 304 1 1926 227 124 98 chr17 32779188 32779358 -52659122 - HAL1 LINE L1 -818 1689 1525 2429 101 7 0 chr17 32779358 32779665 -52658815 - AluSc SINE Alu 0 309 1 1926 227 124 98 chr17 32779665 32780051 -52658429 - HAL1 LINE L1 -982 1525 1070 402 261 127 37 chr17 32780062 32780307 -52658173 - HAL1 LINE L1 -1596 911 645 281 276 123 0 chr17 32780306 32780469 -52658011 + L1ME LINE L1 1380 1562 -5072 * 1797 129 82 111 chr17 32780507 32780947 -52657533 - Tigger2a DNA MER2_type -7 427 1 1047 247 112 31 chr17 32780953 32781140 -52657340 + L1ME LINE L1 1526 1697 -5128 1785 141 87 4 chr17 32781140 32781416 -52657064 + AluSq SINE Alu 1 299 -14 1047 247 112 31 chr17 32781416 32781820 -52656660 + L1ME LINE L1 1697 2318 -4507 463 186 83 7 chr17 32781827 32781972 -52656508 + L1ME LINE L1 2546 2701 -4124 636 265 121 0 chr17 32781978 32782227 -52656253 + L1ME LINE L1 2761 3039 -3605 999 160 47 12 chr17 32782227 32782396 -52656084 + AluJb SINE Alu 1 175 -137 632 189 14 0 chr17 32782435 32782583 -52655897 + L1ME LINE L1 3260 3409 -3235 195 42 0 0 chr17 32782603 32782627 -52655853 + (TCTA)n Simple_repeat Simple_repeat 2 25 0 344 213 149 0 chr17 32782630 32782724 -52655756 - L1MEc LINE L1 -4154 2242 2135 439 228 32 14 chr17 32782788 32782913 -52655567 + L1MC4 LINE L1 6603 6703 -1339 1813 109 33 88 chr17 32783014 32783344 -52655136 - AluSx SINE Alu 0 312 1 2093 119 10 3 chr17 32783430 32783725 -52654755 - AluSq SINE Alu -15 298 2 589 207 26 0 chr17 32783726 32783842 -52654638 - MLT1A2 LTR MaLR -255 119 1 1402 237 115 22 chr17 32783842 32783976 -52654504 + L1ME LINE L1 3565 3685 -2959 2246 106 10 0 chr17 32783976 32784278 -52654202 + AluSx SINE Alu 3 307 -5 1402 237 115 22 chr17 32784278 32784640 -52653840 + L1ME LINE L1 3685 4107 -2537 361 212 13 99 chr17 32784656 32784807 -52653673 + L1ME LINE L1 4731 4868 -1776 271 318 109 35 chr17 32784847 32784866 -52653614 + MIR SINE MIR 18 34 -228 2081 128 10 3 chr17 32784866 32785155 -52653325 + AluSg SINE Alu 1 291 -19 271 318 109 35 chr17 32785155 32785336 -52653144 + MIR SINE MIR 34 233 -29 185 181 389 0 chr17 32785331 32785403 -52653077 - MIR3 SINE MIR -22 186 87 * 183 322 98 35 chr17 32785909 32786052 -52652428 - MIR3 SINE MIR -26 182 31 227 261 162 21 chr17 32786089 32786231 -52652249 - L3b LINE CR1 -130 1453 1292 188 349 16 16 chr17 32787281 32787344 -52651136 + L2 LINE L2 3124 3186 -86 316 245 156 6 chr17 32788455 32788608 -52649872 - MIR SINE MIR -68 140 18 2157 137 7 0 chr17 32789118 32789295 -52649185 - AluSq SINE Alu -5 308 127 405 0 0 0 chr17 32789295 32789340 -52649140 + (TG)n Simple_repeat Simple_repeat 2 46 0 2157 137 7 0 chr17 32789340 32789468 -52649012 - AluSq SINE Alu -186 127 1 307 308 37 0 chr17 32789842 32789949 -52648531 + MIR SINE MIR 118 228 -34 325 270 68 61 chr17 32790311 32790474 -52648006 - MIR SINE MIR -71 191 28 200 280 120 50 chr17 32790415 32790515 -52647965 + MIR SINE MIR 25 131 -77 * 1731 182 35 0 chr17 32792811 32793097 -52645383 + AluJo SINE Alu 6 301 -11 373 65 65 0 chr17 32793843 32793905 -52644575 - L1MA7 LINE L1 0 6291 6226 407 325 83 0 chr17 32795130 32795287 -52643193 - L2 LINE L2 -13 3300 3131 376 321 145 0 chr17 32796394 32796525 -52641955 + MER91A DNA MER1_type 1 150 -46 2430 107 0 10 chr17 32796596 32796906 -52641574 - AluSx SINE Alu -5 307 1 246 315 103 12 chr17 32797171 32797336 -52641144 + L3 LINE CR1 1385 1564 -13 344 338 104 9 chr17 32797784 32798015 -52640465 - L2 LINE L2 -1415 1899 1647 513 322 166 14 chr17 32798459 32798969 -52639511 - L2 LINE L2 -2 3270 2686 31 26 0 0 chr17 32799763 32799801 -52638679 + AT_rich Low_complexity Low_complexity 1 38 0 230 256 149 36 chr17 32801081 32801249 -52637231 + L1ME LINE L1 5653 5839 -282 2032 162 3 0 chr17 32801376 32801679 -52636801 + AluSx SINE Alu 1 304 -8 1067 107 53 91 chr17 32801682 32801869 -52636611 + AluJb SINE Alu 132 311 -1 500 256 44 19 chr17 32802494 32802654 -52635826 + MIR SINE MIR 30 193 -69 356 231 44 0 chr17 32802662 32802753 -52635727 + L1MB7 LINE L1 6085 6179 -5 335 148 98 0 chr17 32803537 32803598 -52634882 - MER5A DNA MER1_type -119 70 4 2246 112 0 0 chr17 32803645 32803940 -52634540 + AluSx SINE Alu 1 295 -17 1802 101 122 35 chr17 32804195 32804482 -52633998 - AluSx SINE Alu 0 312 1 349 301 108 34 chr17 32804585 32804762 -52633718 + MIR SINE MIR 6 191 -63 775 179 0 0 chr17 32806405 32806528 -52631952 + FLAM_C SINE Alu 1 123 -20 294 347 63 42 chr17 32807204 32807394 -52631086 - L2 LINE L2 -181 3091 2898 1700 158 8 4 chr17 32809083 32809348 -52629132 + AluJo SINE Alu 1 266 -46 410 324 63 39 chr17 32809490 32809697 -52628783 - MIR SINE MIR -28 234 23 1598 179 90 0 chr17 32809923 32810202 -52628278 + AluJo SINE Alu 1 304 -8 498 176 0 11 chr17 32810207 32810298 -52628182 + 5S rRNA rRNA 1 90 -31 1748 175 29 29 chr17 32810405 32810713 -52627767 + AluJb SINE Alu 1 308 -4 21 0 0 0 chr17 32810746 32810767 -52627713 + AT_rich Low_complexity Low_complexity 1 21 0 5287 147 42 15 chr17 32810814 32811610 -52626870 + L1MA5 LINE L1 4518 5291 -1009 2195 108 30 0 chr17 32811610 32811905 -52626575 + AluSq SINE Alu 1 304 -9 5287 147 42 15 chr17 32811905 32812840 -52625640 + L1MA5 LINE L1 5291 6299 -1 2277 119 0 0 chr17 32812958 32813268 -52625212 - AluSx SINE Alu -2 310 1 1988 105 35 0 chr17 32813418 32813704 -52624776 - AluJb SINE Alu -12 300 5 2411 70 10 0 chr17 32813718 32814018 -52624462 - AluSx SINE Alu -9 303 1 228 200 33 0 chr17 32814638 32814698 -52623782 + (CCCG)n Simple_repeat Simple_repeat 3 64 0 534 132 70 18 chr17 32815520 32815634 -52622846 - MER96 DNA MER1_type? -50 125 6 297 295 98 16 chr17 32815977 32816099 -52622381 + MIR SINE MIR 51 182 -80 994 166 0 25 chr17 32816567 32816730 -52621750 + FRAM SINE Alu 1 158 -18 2124 141 0 3 chr17 32816734 32817038 -52621442 + AluSx SINE Alu 1 303 -9 1885 164 0 10 chr17 32817062 32817373 -52621107 + AluJb SINE Alu 3 310 -2 2411 61 3 3 chr17 32817602 32817895 -52620585 + AluSc SINE Alu 1 293 -16 841 251 151 60 chr17 32819635 32819840 -52618640 + L1ME1 LINE L1 1619 1804 -4592 2492 87 0 3 chr17 32819840 32820152 -52618328 - AluSx SINE Alu -1 311 1 841 251 151 60 chr17 32820152 32820533 -52617947 + L1ME1 LINE L1 1804 2270 -4126 2264 115 3 0 chr17 32820533 32820838 -52617642 + AluSx SINE Alu 2 307 -5 841 251 151 60 chr17 32820838 32820887 -52617593 + L1ME1 LINE L1 2270 2313 -4083 1042 121 7 0 chr17 32820888 32821029 -52617451 - AluSq/x SINE Alu -170 142 1 1067 205 58 85 chr17 32821029 32821317 -52617163 + L1ME1 LINE L1 2667 2942 -3273 676 209 0 8 chr17 32821317 32821446 -52617034 + FLAM_A SINE Alu 1 128 -5 1067 205 58 85 chr17 32821446 32821557 -52616923 + L1ME1 LINE L1 2942 3055 -3160 953 191 59 15 chr17 32821583 32821787 -52616693 + MER20 DNA MER1_type 1 213 -6 502 206 137 5 chr17 32821794 32821998 -52616482 + L1ME1 LINE L1 3100 3330 -2885 895 235 22 15 chr17 32822009 32822162 -52616318 + L1ME1 LINE L1 4574 4731 -1484 2100 124 3 3 chr17 32822162 32822461 -52616019 + AluSg SINE Alu 4 302 -8 895 235 22 15 chr17 32822461 32822575 -52615905 + L1ME1 LINE L1 4731 4843 -1372 2056 140 7 0 chr17 32822630 32822930 -52615550 + AluSx SINE Alu 1 302 -10 457 202 53 0 chr17 32822930 32823024 -52615456 - FLAM_A SINE Alu -27 115 17 397 237 88 0 chr17 32823024 32823138 -52615342 + L1ME1 LINE L1 4833 4956 -1259 956 163 0 67 chr17 32823143 32823321 -52615159 + AluJo SINE Alu 115 280 -32 2888 207 41 42 chr17 32823346 32824231 -52614249 + L1ME1 LINE L1 5041 6015 -220 2452 88 0 0 chr17 32824231 32824527 -52613953 + AluSc SINE Alu 1 296 -13 2888 207 41 42 chr17 32824527 32824644 -52613836 + L1ME1 LINE L1 6015 6131 -104 1750 189 89 124 chr17 32825173 32825945 -52612535 + LTR1B LTR ERV1 1 745 -81 452 275 15 12 chr17 32826010 32826144 -52612336 + LTR28 LTR ERV1 688 1019 -1 15371 164 30 27 chr17 32826279 32827215 -52611265 + HUERS-P2 LTR ERV1 75 1007 -3465 2160 115 3 0 chr17 32827215 32827510 -52610970 - AluSg SINE Alu -14 296 1 15371 164 30 27 chr17 32827510 32830404 -52608076 + HUERS-P2 LTR ERV1 1007 4055 -417 5711 108 16 16 chr17 32830403 32831197 -52607283 + LTR1B-int LTR ERV1 5808 6601 -490 * 2221 155 11 3 chr17 32831195 32831549 -52606931 + LTR1B-int LTR ERV1 6734 7090 -1 * 1720 184 83 136 chr17 32831551 32832338 -52606142 + LTR1B LTR ERV1 1 745 -81 419 266 68 38 chr17 32832392 32832526 -52605954 + LTR28 LTR ERV1 688 1019 -1 221 231 77 0 chr17 32832600 32832665 -52605815 + MIR SINE MIR 23 92 -170 420 223 0 0 chr17 32833061 32833155 -52605325 - AluS SINE Alu -218 95 2 2309 91 10 3 chr17 32833305 32833612 -52604868 + AluSx SINE Alu 1 309 -3 2415 69 3 0 chr17 32834199 32834502 -52603978 - AluY SINE Alu -7 304 1 4635 45 2 10 chr17 32834635 32835214 -52603266 - L1PA8 LINE L1 -1 6171 5598 2463 84 27 7 chr17 32835486 32835930 -52602550 - L1PA8 LINE L1 -561 5593 5148 386 349 74 0 chr17 32836254 32836403 -52602077 - L2 LINE L2 0 3272 3113 2376 79 7 0 chr17 32837032 32837335 -52601145 - AluSg SINE Alu -5 305 1 2320 212 29 31 chr17 32837347 32837594 -52600886 - L1 LINE L1 -1127 5019 4773 2425 95 0 0 chr17 32837594 32837900 -52600580 - AluSp SINE Alu -6 307 2 2320 212 29 31 chr17 32837900 32838241 -52600239 - L1 LINE L1 -1373 4773 4432 1914 83 4 0 chr17 32838265 32838505 -52599975 - AluSp SINE Alu -10 303 63 284 95 0 0 chr17 32838505 32838547 -52599933 - L1M4c LINE L1 -6326 58 17 * 1026 196 129 81 chr17 32838546 32838691 -52599789 - L1MD1 LINE L1 -197 6045 5909 1864 129 39 4 chr17 32838691 32838971 -52599509 + AluSx SINE Alu 1 290 -22 1026 196 129 81 chr17 32838971 32839231 -52599249 - L1MD1 LINE L1 -333 5909 5433 976 189 136 45 chr17 32839233 32839501 -52598979 - AluJo SINE Alu 0 310 21 402 165 53 83 chr17 32839509 32839595 -52598885 - L1MD1 LINE L1 -797 5445 5363 687 160 0 0 chr17 32839595 32839701 -52598779 - U6 snRNA snRNA 0 107 2 402 165 53 83 chr17 32839701 32839747 -52598733 - L1MD1 LINE L1 -879 5363 5317 1399 108 10 21 chr17 32839765 32839959 -52598521 + AluSg/x SINE Alu 106 297 -13 1021 288 40 21 chr17 32839959 32840428 -52598052 - L1M4 LINE L1 -3464 2682 2205 2069 145 0 3 chr17 32840429 32840739 -52597741 - AluSg SINE Alu -1 309 1 2023 155 0 0 chr17 32840739 32841042 -52597438 - AluJo SINE Alu -9 303 1 1065 130 16 22 chr17 32841082 32841267 -52597213 - AluSg/x SINE Alu -7 303 120 746 154 16 0 chr17 32841368 32841491 -52596989 - AluSx SINE Alu -150 162 38 2264 102 3 10 chr17 32841502 32841806 -52596674 + AluSp SINE Alu 1 302 -11 1006 252 76 53 chr17 32841922 32842001 -52596479 + L1MDa LINE L1 2404 2480 -4060 2114 139 7 0 chr17 32842001 32842302 -52596178 + AluSx SINE Alu 6 308 -4 1006 252 76 53 chr17 32842302 32842373 -52596107 + L1MDa LINE L1 2480 2548 -3992 1975 136 9 28 chr17 32842373 32842690 -52595790 + AluSx SINE Alu 1 311 -1 1006 252 76 53 chr17 32842690 32842724 -52595756 + L1MDa LINE L1 2548 2580 -3960 2006 156 0 0 chr17 32842724 32843025 -52595455 + AluJo SINE Alu 1 301 -11 2063 145 0 3 chr17 32843025 32843335 -52595145 + AluSg SINE Alu 1 309 -1 1006 252 76 53 chr17 32843335 32843806 -52594674 + L1MDa LINE L1 2579 3076 -3464 1385 113 10 21 chr17 32843806 32844000 -52594480 - AluSg/x SINE Alu -13 297 106 402 165 53 83 chr17 32844018 32844064 -52594416 + L1MD1 LINE L1 5317 5363 -879 687 160 0 0 chr17 32844064 32844170 -52594310 + U6 snRNA snRNA 2 107 0 402 165 53 83 chr17 32844170 32844256 -52594224 + L1MD1 LINE L1 5363 5445 -797 977 189 136 45 chr17 32844264 32844535 -52593945 + AluJo SINE Alu 21 313 0 1051 197 132 62 chr17 32844537 32844783 -52593697 + L1MD1 LINE L1 5433 5660 -582 198 0 0 0 chr17 32844783 32844805 -52593675 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 1788 128 45 0 chr17 32844810 32845076 -52593404 - AluSx SINE Alu -34 278 1 1051 197 132 62 chr17 32845076 32845221 -52593259 + L1MD1 LINE L1 5663 6045 -197 284 95 0 0 chr17 32845220 32845262 -52593218 + L1M4c LINE L1 17 58 -6326 * 1941 85 4 0 chr17 32845262 32845508 -52592972 + AluSp SINE Alu 63 309 -4 2354 209 29 31 chr17 32845531 32845872 -52592608 + L1 LINE L1 4432 4773 -1373 2378 105 0 0 chr17 32845872 32846178 -52592302 + AluSp SINE Alu 2 307 -6 2354 209 29 31 chr17 32846178 32846425 -52592055 + L1 LINE L1 4773 5019 -1127 2848 3 0 0 chr17 32846437 32846737 -52591743 + AluYa5 SINE Alu 1 300 -11 2192 99 0 3 chr17 32846749 32847064 -52591416 + AluY SINE Alu 1 314 0 2208 106 10 0 chr17 32847317 32847619 -52590861 + AluSg SINE Alu 1 305 -5 386 349 74 0 chr17 32848248 32848397 -52590083 + L2 LINE L2 3113 3272 0 2468 84 27 7 chr17 32848721 32849165 -52589315 + L1PA8 LINE L1 5148 5593 -561 4492 55 2 12 chr17 32849437 32850017 -52588463 + L1PA8 LINE L1 5598 6171 -1 2087 129 3 3 chr17 32850150 32850461 -52588019 + AluY SINE Alu 1 311 0 252 0 0 0 chr17 32851048 32851076 -52587404 + (T)n Simple_repeat Simple_repeat 1 28 0 481 182 83 55 chr17 32851728 32851909 -52586571 + MER53 DNA DNA 3 188 -1 343 321 89 21 chr17 32852062 32852252 -52586228 + L2 LINE L2 1462 1664 -1650 231 175 0 0 chr17 32853555 32853612 -52584868 + (TG)n Simple_repeat Simple_repeat 1 57 0 482 305 83 36 chr17 32854259 32854561 -52583919 - LTR40b LTR ERVL -2 460 145 2540 214 90 84 chr17 32854678 32854819 -52583661 - L1MD3 LINE L1 -5 8037 7898 225 0 0 0 chr17 32854819 32854844 -52583636 + (TC)n Simple_repeat Simple_repeat 2 26 0 2540 214 90 84 chr17 32854844 32855727 -52582753 - L1MD3 LINE L1 -144 7898 7024 2107 120 3 10 chr17 32855851 32856151 -52582329 - AluSc SINE Alu -11 298 1 2135 98 7 11 chr17 32856154 32856477 -52582003 - AluSx SINE Alu 0 322 1 2057 116 3 10 chr17 32856482 32856774 -52581706 - AluSc SINE Alu -19 290 1 2366 97 0 0 chr17 32856775 32857075 -52581405 - AluSg SINE Alu -10 300 1 1384 81 0 6 chr17 32857253 32857425 -52581055 - AluSq SINE Alu -142 171 1 2155 139 3 0 chr17 32857494 32857804 -52580676 - AluSx SINE Alu -1 311 1 2443 69 7 0 chr17 32858043 32858347 -52580133 + AluY SINE Alu 1 306 -5 1936 130 4 0 chr17 32858458 32858727 -52579753 + AluSx SINE Alu 9 278 -34 28 61 0 0 chr17 32858944 32858993 -52579487 + AT_rich Low_complexity Low_complexity 1 49 0 797 168 8 0 chr17 32858998 32859129 -52579351 - FLAM_C SINE Alu -1 132 1 2310 100 0 3 chr17 32859160 32859461 -52579019 + AluSq SINE Alu 1 300 -13 2249 113 0 7 chr17 32859473 32859783 -52578697 + AluSp SINE Alu 6 313 0 2233 99 7 10 chr17 32860029 32860332 -52578148 + AluSc SINE Alu 1 302 -7 673 149 0 9 chr17 32860591 32860698 -52577782 - L1PB3 LINE L1 -48 6106 6001 2253 119 3 3 chr17 32860935 32861247 -52577233 - AluSx SINE Alu 0 312 1 2219 89 25 0 chr17 32861455 32861735 -52576745 - AluSg SINE Alu -23 287 1 273 286 0 36 chr17 32861790 32861874 -52576606 - MIR SINE MIR -98 110 30 2312 109 0 0 chr17 32863034 32863336 -52575144 - AluSg SINE Alu -8 302 1 2487 68 0 3 chr17 32863342 32863638 -52574842 - AluSc SINE Alu -14 295 1 1711 170 3 7 chr17 32863795 32864078 -52574402 + AluJo SINE Alu 1 282 -30 2195 134 0 0 chr17 32864461 32864766 -52573714 - AluSx SINE Alu -7 305 1 2327 89 7 0 chr17 32864870 32865174 -52573306 - AluY SINE Alu -5 306 1 2138 60 4 23 chr17 32865514 32865779 -52572701 - AluSp SINE Alu -24 289 30 920 71 0 9 chr17 32865800 32865912 -52572568 - AluY SINE Alu -179 132 22 1563 180 9 75 chr17 32865921 32866107 -52572373 - AluJb SINE Alu 0 312 156 2115 142 3 0 chr17 32866107 32866418 -52572062 - AluSx SINE Alu 0 312 1 1563 180 9 75 chr17 32866418 32866565 -52571915 - AluJb SINE Alu -156 156 1 354 146 0 0 chr17 32866566 32866621 -52571859 - MER53 DNA DNA -134 55 1 2103 91 7 46 chr17 32866642 32866811 -52571669 - AluSq SINE Alu -18 295 142 2480 71 0 0 chr17 32866811 32867105 -52571375 - AluSq SINE Alu -19 294 1 2103 91 7 46 chr17 32867105 32867242 -52571238 - AluSq SINE Alu -171 142 1 2325 88 0 44 chr17 32867252 32867424 -52571056 - AluSq SINE Alu -8 305 152 2119 93 0 59 chr17 32867424 32867745 -52570735 - AluY SINE Alu -9 302 1 2325 88 0 44 chr17 32867745 32867889 -52570591 - AluSq SINE Alu -161 152 3 2190 93 0 55 chr17 32868474 32868618 -52569862 + AluSx SINE Alu 4 123 -189 2238 97 10 0 chr17 32868618 32868908 -52569572 + AluY SINE Alu 1 293 -18 2190 93 0 55 chr17 32868908 32869075 -52569405 + AluSx SINE Alu 123 298 -14 2022 95 0 89 chr17 32869082 32869398 -52569082 + AluSg SINE Alu 1 288 -22 710 162 17 0 chr17 32869505 32869622 -52568858 - FLAM_A SINE Alu -13 129 11 323 224 15 8 chr17 32870017 32870118 -52568362 + MIR3 SINE MIR 106 207 -1 618 258 0 0 chr17 32870208 32870340 -52568140 + FLAM_C SINE Alu 2 133 -10 2143 96 7 7 chr17 32870531 32870822 -52567658 - AluSg SINE Alu -19 291 1 1364 108 6 0 chr17 32871094 32871270 -52567210 + AluSx SINE Alu 1 177 -135 1452 41 0 6 chr17 32871370 32871539 -52566941 - AluY SINE Alu -142 169 2 522 158 30 0 chr17 32871570 32871671 -52566809 - MER53 DNA DNA -69 120 17 1499 183 29 15 chr17 32872997 32873271 -52565209 + AluJb SINE Alu 1 278 -34 2168 93 4 4 chr17 32873764 32874043 -52564437 + AluSp SINE Alu 1 279 -34 2029 96 53 0 chr17 32875085 32875367 -52563113 + AluSx SINE Alu 2 298 -14 2285 109 0 7 chr17 32876501 32876803 -52561677 - AluSx SINE Alu -12 300 1 556 93 0 75 chr17 32876959 32877066 -52561414 + AluSg/x SINE Alu 214 312 0 602 325 112 13 chr17 32877066 32877215 -52561265 + L3 LINE CR1 1103 1236 -341 334 211 26 0 chr17 32877215 32877291 -52561189 + MER116 DNA Mariner 3 80 0 602 325 112 13 chr17 32877291 32877525 -52560955 + L3 LINE CR1 1236 1524 -53 38 0 0 20 chr17 32877676 32877688 -52560792 + AT_rich Low_complexity Low_complexity 1 12 -36 2339 104 0 0 chr17 32877688 32877996 -52560484 - AluSc SINE Alu -1 308 1 38 0 0 20 chr17 32877996 32878032 -52560448 + AT_rich Low_complexity Low_complexity 12 48 0 2228 93 3 3 chr17 32878032 32878321 -52560159 - AluSc SINE Alu -20 289 1 275 293 61 27 chr17 32878484 32878631 -52559849 + L2 LINE L2 3160 3311 -2 22 80 0 0 chr17 32878672 32878722 -52559758 + AT_rich Low_complexity Low_complexity 1 50 0 357 216 128 8 chr17 32878724 32878849 -52559631 + MER112 DNA MER1_type 119 258 -2 1361 140 14 27 chr17 32879081 32879302 -52559178 + AluJb SINE Alu 85 302 -10 710 197 15 8 chr17 32879316 32879448 -52559032 + FLAM_A SINE Alu 1 133 0 2013 97 6 84 chr17 32879471 32879791 -52558689 + AluSx SINE Alu 1 295 -17 2300 100 0 0 chr17 32880302 32880601 -52557879 - AluSx SINE Alu -13 299 1 1976 135 32 0 chr17 32880613 32880894 -52557586 - AluSx SINE Alu -22 290 1 268 309 22 73 chr17 32881268 32881404 -52557076 + MIR3 SINE MIR 8 136 -72 2419 72 13 3 chr17 32882675 32882979 -52555501 + AluSp SINE Alu 1 307 -6 652 26 0 0 chr17 32882981 32883058 -52555422 - AluY SINE Alu -24 287 211 460 297 8 0 chr17 32883407 32883525 -52554955 + MIR SINE MIR 10 128 -134 1111 121 0 6 chr17 32883606 32883771 -52554709 - AluSc SINE Alu -11 298 135 2349 62 31 0 chr17 32883818 32884108 -52554372 - AluSx SINE Alu -13 299 1 1530 175 49 3 chr17 32885115 32885400 -52553080 + AluJb SINE Alu 1 298 -14 2102 93 44 0 chr17 32886192 32886486 -52551994 - AluSg SINE Alu 0 306 1 2252 84 17 27 chr17 32887039 32887338 -52551142 - AluSp SINE Alu -17 296 1 243 0 0 0 chr17 32887339 32887366 -52551114 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1943 73 4 0 chr17 32887382 32887614 -52550866 - AluSc SINE Alu -76 233 1 938 130 0 27 chr17 32887616 32887762 -52550718 - AluJo SINE Alu -170 142 1 366 93 0 19 chr17 32887801 32887855 -52550625 - MER66A LTR ERV1 -139 339 287 185 295 268 9 chr17 32888044 32888156 -52550324 + L2 LINE L2 2886 3026 -287 2051 143 0 0 chr17 32888159 32888452 -52550028 - AluJb SINE Alu -13 299 7 2458 46 0 39 chr17 32888468 32888774 -52549706 - AluY SINE Alu -17 294 1 602 148 0 10 chr17 32888776 32888877 -52549603 - FLAM_C SINE Alu -6 137 38 2307 107 3 0 chr17 32889312 32889620 -52548860 - AluSp SINE Alu -4 309 1 2447 90 0 3 chr17 32889906 32890216 -52548264 + AluSp SINE Alu 1 309 -4 2388 57 0 0 chr17 32890657 32890964 -52547516 + AluY SINE Alu 1 307 0 729 232 81 10 chr17 32891017 32891183 -52547297 + MIR SINE MIR 41 225 -37 2384 92 0 16 chr17 32891183 32891498 -52546982 + AluSq SINE Alu 1 310 -3 729 232 81 10 chr17 32891498 32891529 -52546951 + MIR SINE MIR 225 252 -10 21 0 0 0 chr17 32891538 32891559 -52546921 + AT_rich Low_complexity Low_complexity 1 21 0 1089 88 0 0 chr17 32891560 32891696 -52546784 + AluSq SINE Alu 1 136 -176 282 184 0 0 chr17 32891696 32891772 -52546708 + A-rich Low_complexity Low_complexity 1 76 0 1355 96 6 0 chr17 32891772 32891950 -52546530 + AluSq SINE Alu 118 296 -17 22 39 0 39 chr17 32891986 32892008 -52546472 + AT_rich Low_complexity Low_complexity 1 22 -27 2160 120 3 0 chr17 32892008 32892300 -52546180 + AluSx SINE Alu 1 293 -19 22 39 0 39 chr17 32892300 32892328 -52546152 + AT_rich Low_complexity Low_complexity 22 49 0 1602 145 50 31 chr17 32892478 32892625 -52545855 + MER33 DNA MER1_type 2 145 -2440 2367 86 0 13 chr17 32892625 32892928 -52545552 - AluSq SINE Alu -14 299 1 1602 145 50 31 chr17 32892928 32893097 -52545383 + MER33 DNA MER1_type 145 324 0 956 146 32 25 chr17 32893235 32893393 -52545087 - AluJb SINE Alu -16 296 138 2321 92 7 0 chr17 32893401 32893693 -52544787 - AluSg SINE Alu -16 294 1 267 79 0 0 chr17 32893728 32893766 -52544714 + (TA)n Simple_repeat Simple_repeat 1 38 0 2293 62 0 21 chr17 32893903 32894222 -52544258 - AluSg SINE Alu 0 313 1 2734 30 0 0 chr17 32894331 32894635 -52543845 - AluY SINE Alu -7 304 1 21 0 0 0 chr17 32894970 32894991 -52543489 + GC_rich Low_complexity Low_complexity 1 21 0 30 0 0 0 chr17 32895038 32895068 -52543412 + GC_rich Low_complexity Low_complexity 1 30 0 192 125 0 0 chr17 32895118 32895150 -52543330 + (TCCCC)n Simple_repeat Simple_repeat 1 32 0 217 228 11 43 chr17 32895298 32895390 -52543090 + CT-rich Low_complexity Low_complexity 1 89 0 510 119 0 0 chr17 32895690 32895774 -52542706 + (CTGGGG)n Simple_repeat Simple_repeat 6 89 0 2331 70 16 29 chr17 32896355 32896670 -52541810 + AluSx SINE Alu 1 311 -1 26 0 0 0 chr17 32897771 32897797 -52540683 + AT_rich Low_complexity Low_complexity 1 26 0 2137 77 42 11 chr17 32898077 32898364 -52540116 - AluYa5 SINE Alu -14 297 2 5705 33 0 11 chr17 32898381 32899018 -52539462 - SVA Other Other 0 1386 757 1991 123 6 35 chr17 32899187 32899504 -52538976 - AluSc SINE Alu -1 308 1 237 65 0 0 chr17 32899749 32899780 -52538700 + (T)n Simple_repeat Simple_repeat 1 31 0 189 0 0 0 chr17 32899889 32899910 -52538570 + (TG)n Simple_repeat Simple_repeat 1 21 0 2379 108 0 0 chr17 32899963 32900269 -52538211 - AluSg SINE Alu -4 306 1 2099 105 6 54 chr17 32900554 32900869 -52537611 - AluSq SINE Alu -13 300 1 401 309 56 15 chr17 32900874 32901112 -52537368 + L1ME LINE L1 5443 5699 -463 2383 74 0 0 chr17 32901114 32901428 -52537052 - AluY SINE Alu 0 314 1 826 149 0 50 chr17 32901429 32901570 -52536910 - AluSq/x SINE Alu -176 136 3 947 198 0 0 chr17 32901739 32901901 -52536579 - AluSc SINE Alu -14 295 134 1960 140 30 0 chr17 32901903 32902203 -52536277 - AluSx SINE Alu -3 309 1 1504 176 48 31 chr17 32902205 32902494 -52535986 - AluJo SINE Alu -18 294 1 1837 166 0 14 chr17 32902757 32903046 -52535434 - AluJb SINE Alu -27 285 1 189 0 0 0 chr17 32903243 32903264 -52535216 + (TG)n Simple_repeat Simple_repeat 1 21 0 1782 143 20 17 chr17 32903332 32903632 -52534848 + AluJb SINE Alu 1 301 -11 1953 151 20 3 chr17 32903715 32904014 -52534466 - AluSx SINE Alu -6 306 3 2584 48 0 3 chr17 32904394 32904706 -52533774 - AluY SINE Alu 0 311 1 1541 179 10 36 chr17 32904849 32905157 -52533323 - AluJo SINE Alu -10 302 3 1101 120 13 0 chr17 32905315 32905473 -52533007 + AluSc SINE Alu 140 299 -10 825 166 79 79 chr17 32905473 32905696 -52532784 + L1ME LINE L1 5280 5505 -657 1591 187 53 0 chr17 32905696 32905979 -52532501 + AluJb SINE Alu 1 298 -14 825 166 79 79 chr17 32905979 32906020 -52532460 + L1ME LINE L1 5504 5544 -618 337 288 214 41 chr17 32906021 32906136 -52532344 + L2 LINE L2 2886 2980 -333 2062 140 0 0 chr17 32906136 32906428 -52532052 - AluJb SINE Alu -14 298 7 337 288 214 41 chr17 32906428 32906444 -52532036 + L2 LINE L2 2980 2992 -321 2324 83 10 3 chr17 32906444 32906734 -52531746 - AluSc SINE Alu -17 292 1 337 288 214 41 chr17 32906734 32906966 -52531514 + L2 LINE L2 2992 3313 0 32 75 0 0 chr17 32907259 32907326 -52531154 + AT_rich Low_complexity Low_complexity 1 67 0 709 164 0 86 chr17 32907574 32907714 -52530766 - FLAM_A SINE Alu -5 128 1 2159 95 42 0 chr17 32907739 32908023 -52530457 + AluSx SINE Alu 1 296 -16 2376 84 0 0 chr17 32908091 32908387 -52530093 + AluY SINE Alu 1 296 -15 2411 92 0 13 chr17 32908631 32908947 -52529533 + AluSx SINE Alu 1 312 0 243 125 0 0 chr17 32909320 32909360 -52529120 + (CA)n Simple_repeat Simple_repeat 2 41 0 3383 158 42 54 chr17 32909470 32910401 -52528079 - MER21A LTR ERV1 -18 913 73 380 219 2 0 chr17 32910501 32910583 -52527897 - MER21A LTR ERV1 -780 83 1 833 165 0 0 chr17 32910609 32910742 -52527738 - FLAM_C SINE Alu 0 133 1 487 183 10 67 chr17 32912089 32912193 -52526287 + FLAM_C SINE Alu 21 118 -25 207 0 0 0 chr17 32912200 32912223 -52526257 + (CAAGA)n Simple_repeat Simple_repeat 3 25 0 216 171 0 43 chr17 32912508 32912578 -52525902 + (CAAA)n Simple_repeat Simple_repeat 2 68 0 1804 161 18 11 chr17 32912625 32912904 -52525576 + AluJo SINE Alu 1 281 -31 1855 91 0 24 chr17 32912904 32913156 -52525324 - AluSc SINE Alu -8 301 55 1733 92 4 0 chr17 32913257 32913484 -52524996 + AluSg/x SINE Alu 65 292 -20 2163 120 3 3 chr17 32913494 32913794 -52524686 + AluSx SINE Alu 1 300 -12 930 159 29 12 chr17 32913812 32913982 -52524498 + AluSg/x SINE Alu 118 290 -20 295 287 152 24 chr17 32913994 32914158 -52524322 + L1ME1 LINE L1 5962 6146 -20 23 33 0 0 chr17 32914308 32914338 -52524142 + AT_rich Low_complexity Low_complexity 1 30 0 690 120 0 0 chr17 32914408 32914508 -52523972 - HY3 scRNA scRNA -1 100 1 2170 118 3 20 chr17 32914537 32914843 -52523637 + AluSx SINE Alu 1 301 -11 1967 104 83 0 chr17 32914982 32915260 -52523220 + AluSg SINE Alu 1 301 -9 2301 103 3 0 chr17 32915589 32915890 -52522590 + AluSp SINE Alu 1 302 -11 2316 164 5 16 chr17 32916171 32916542 -52521938 + Tigger7 DNA MER2_type 9 375 -2112 1675 161 27 14 chr17 32916575 32916867 -52521613 + AluJo SINE Alu 1 296 -16 2087 103 4 0 chr17 32916897 32917169 -52521311 + AluSp SINE Alu 1 273 -40 443 103 0 0 chr17 32917269 32917364 -52521116 + AluSc SINE Alu 224 318 0 536 179 24 140 chr17 32917364 32917571 -52520909 - L1MDa LINE L1 -5362 1178 996 2002 124 30 0 chr17 32917571 32917870 -52520610 - AluSq SINE Alu -5 308 1 1130 221 42 35 chr17 32917871 32918160 -52520320 - L1MDa LINE L1 -6248 292 2 1071 221 130 32 chr17 32918175 32918373 -52520107 - L1MEc LINE L1 -3019 3196 3019 239 54 27 0 chr17 32918373 32918410 -52520070 + (TTATG)n Simple_repeat Simple_repeat 4 41 0 2094 103 4 4 chr17 32918410 32918691 -52519789 - AluSg1 SINE Alu -28 281 1 1071 221 130 32 chr17 32918691 32918997 -52519483 - L1MEc LINE L1 -3195 3020 2641 2057 119 0 0 chr17 32918997 32919274 -52519206 - AluSx SINE Alu -35 277 1 723 196 21 21 chr17 32919274 32919417 -52519063 - AluJo SINE Alu -168 144 2 662 279 18 14 chr17 32919432 32919707 -52518773 - L1MEc LINE L1 -3586 2629 2355 1202 186 62 69 chr17 32919765 32919909 -52518571 - AluJb SINE Alu -13 289 146 2356 87 7 0 chr17 32919909 32920208 -52518272 - AluSp SINE Alu -12 301 1 203 0 37 0 chr17 32920216 32920243 -52518237 + (TG)n Simple_repeat Simple_repeat 1 28 0 1202 186 62 69 chr17 32920243 32920380 -52518100 - AluJb SINE Alu -163 139 1 2230 266 65 42 chr17 32920570 32921663 -52516817 - L1MEc LINE L1 -5235 1161 44 * 2444 221 115 116 chr17 32921659 32921906 -52516574 - L1ME LINE L1 -711 5520 5274 2321 33 44 0 chr17 32921906 32922217 -52516263 - AluY SINE Alu 0 323 1 2444 221 115 116 chr17 32922217 32922948 -52515532 - L1ME LINE L1 -957 5274 4544 1891 139 42 0 chr17 32922948 32923236 -52515244 - AluSx SINE Alu -12 300 1 2444 221 115 116 chr17 32923236 32923623 -52514857 - L1ME LINE L1 -1687 4544 4158 573 259 22 0 chr17 32923623 32923758 -52514722 - MER74A LTR ERVL 0 558 421 2444 221 115 116 chr17 32923758 32923962 -52514518 - L1ME LINE L1 -2073 4158 3955 1468 133 48 36 chr17 32923962 32924210 -52514270 - AluSx SINE Alu -61 251 1 2444 221 115 116 chr17 32924210 32924752 -52513728 - L1ME LINE L1 -2276 3955 3414 4085 137 21 6 chr17 32924752 32925378 -52513102 - MER41B LTR ERV1 0 635 1 2444 221 115 116 chr17 32925378 32925525 -52512955 - L1ME LINE L1 -2817 3414 3268 811 86 31 0 chr17 32925525 32925653 -52512827 + (CATTT)n Simple_repeat Simple_repeat 2 133 0 1956 133 0 18 chr17 32925653 32925938 -52512542 - AluSx SINE Alu -32 280 1 2444 221 115 116 chr17 32925938 32926093 -52512387 - L1ME LINE L1 -2961 3270 2748 494 242 90 43 chr17 32926127 32926338 -52512142 - L1ME LINE L1 -3550 2665 2445 1886 149 0 23 chr17 32926355 32926677 -52511803 - AluSx SINE Alu 0 312 1 246 302 52 0 chr17 32926678 32926794 -52511686 - L1ME LINE L1 -4003 2393 2272 2471 209 86 7 chr17 32926797 32927405 -52511075 - L1MB7 LINE L1 -106 6078 5423 1934 100 78 11 chr17 32927414 32927695 -52510785 - AluSg SINE Alu -10 300 1 1139 234 86 16 chr17 32927695 32928066 -52510414 - L1MB7 LINE L1 -814 5332 4936 1197 313 84 34 chr17 32928123 32928944 -52509536 - L1ME LINE L1 -4371 2025 1148 2360 95 7 3 chr17 32928944 32929249 -52509231 - AluSp SINE Alu -7 306 1 1197 313 84 34 chr17 32929249 32929375 -52509105 - L1ME LINE L1 -5248 1148 1030 902 203 11 5 chr17 32929377 32929564 -52508916 - AluJo SINE Alu -5 307 120 2144 118 0 0 chr17 32929678 32929977 -52508503 + AluSg SINE Alu 1 299 0 2058 130 10 13 chr17 32930072 32930380 -52508100 - AluSg SINE Alu -2 308 2 2400 94 0 0 chr17 32930414 32930722 -52507758 - AluY SINE Alu -3 308 1 1907 152 7 7 chr17 32930727 32931030 -52507450 - AluJb SINE Alu -9 303 1 2090 117 7 17 chr17 32931293 32931455 -52507025 - AluSx SINE Alu -16 296 137 2228 110 0 3 chr17 32931455 32931746 -52506734 - AluSc SINE Alu -19 290 1 2090 117 7 17 chr17 32931746 32931882 -52506598 - AluSx SINE Alu -175 137 1 3002 6 0 0 chr17 32931902 32932216 -52506264 - AluYb8 SINE Alu -4 314 1 441 297 21 14 chr17 32932216 32932361 -52506119 - MIR SINE MIR -97 165 20 541 217 17 0 chr17 32932371 32932491 -52505989 - MER20 DNA MER1_type 0 219 98 407 286 41 14 chr17 32932514 32932661 -52505819 - MIR SINE MIR -65 197 47 181 118 0 0 chr17 32933251 32933285 -52505195 + MIR SINE MIR 123 156 -106 1875 169 3 7 chr17 32933585 32933892 -52504588 + AluJo SINE Alu 1 306 -6 299 264 25 16 chr17 32936032 32936153 -52502327 - MER113 DNA MER1_type? -380 141 20 359 279 0 41 chr17 32936577 32936699 -52501781 + L2 LINE L2 2458 2574 -740 513 244 29 105 chr17 32937587 32937759 -52500721 + L1MD3 LINE L1 7705 7844 -151 1745 161 0 27 chr17 32937759 32938058 -52500422 - AluJo SINE Alu -21 291 1 513 244 29 105 chr17 32938058 32938200 -52500280 + L1MD3 LINE L1 7844 7995 0 928 319 37 11 chr17 32943313 32943980 -52494500 - L1MC4 LINE L1 -1629 6156 5479 231 313 82 61 chr17 32948700 32948847 -52489633 + MIR SINE MIR 94 243 -19 1696 186 21 3 chr17 32949882 32950220 -52488260 - MER2 DNA MER2_type 0 344 1 183 80 0 0 chr17 32950299 32950324 -52488156 + (TCCA)n Simple_repeat Simple_repeat 4 28 0 701 165 133 19 chr17 32950670 32950828 -52487652 - THE1C LTR MaLR 0 375 200 1990 89 4 0 chr17 32950830 32951078 -52487402 - AluSx SINE Alu -63 249 1 2283 98 3 22 chr17 32951085 32951400 -52487080 - AluSx SINE Alu -3 309 1 2356 90 13 0 chr17 32951408 32951709 -52486771 - AluSg SINE Alu -5 305 1 389 231 143 88 chr17 32952074 32952159 -52486321 + MER102b DNA MER1_type 85 164 -1264 2570 57 3 0 chr17 32952159 32952459 -52486021 + AluSp SINE Alu 1 301 -12 389 231 143 88 chr17 32952459 32952611 -52485869 + MER102b DNA MER1_type 164 335 -6 2388 109 0 0 chr17 32952744 32953048 -52485432 + AluSg SINE Alu 1 304 -6 2410 80 20 3 chr17 32953232 32953532 -52484948 - AluSx SINE Alu -7 305 1 1084 92 0 0 chr17 32953631 32953784 -52484696 - L1PA13 LINE L1 -14 6149 5997 316 289 11 0 chr17 32953871 32953961 -52484519 - L2 LINE L2 0 3313 3223 719 295 31 9 chr17 32954475 32954699 -52483781 + MIR SINE MIR 33 261 -1 264 236 56 0 chr17 32957069 32957141 -52481339 + MIR SINE MIR 117 192 -70 705 172 43 50 chr17 32957252 32957472 -52481008 - L1MB2 LINE L1 -45 6133 5910 378 303 75 103 chr17 32957505 32957659 -52480821 - L1MB2 LINE L1 -298 5823 5679 2314 114 3 0 chr17 32957659 32957967 -52480513 - AluSx SINE Alu -3 309 1 378 303 75 103 chr17 32957967 32958093 -52480387 - L1MB2 LINE L1 -442 5679 5551 852 248 23 5 chr17 32958281 32958499 -52479981 - MER58A DNA MER1_type 0 224 3 2103 132 0 0 chr17 32958692 32959015 -52479465 + AluSx SINE Alu 1 323 0 1932 120 0 0 chr17 32959018 32959276 -52479204 + AluSg SINE Alu 40 297 -13 216 318 23 23 chr17 32959292 32959379 -52479101 + MER5A DNA MER1_type 1 98 -91 409 343 0 0 chr17 32959422 32959559 -52478921 + MIR SINE MIR 49 185 -77 574 285 69 36 chr17 32962264 32962569 -52475911 + L1ME4a LINE L1 5582 5896 -225 538 214 107 25 chr17 32963845 32964004 -52474476 - MER5A DNA MER1_type -7 182 11 2533 68 0 16 chr17 32964131 32964438 -52474042 + AluY SINE Alu 1 302 -9 2350 109 0 3 chr17 32964811 32965122 -52473358 + AluSg SINE Alu 1 310 0 405 0 0 0 chr17 32965707 32965752 -52472728 + (TG)n Simple_repeat Simple_repeat 1 45 0 437 291 35 65 chr17 32965987 32966186 -52472294 - L1ME4a LINE L1 -40 6081 5889 337 264 63 75 chr17 32966283 32966522 -52471958 - L1ME4a LINE L1 -1989 5819 5584 287 250 40 30 chr17 32966926 32967026 -52471454 - MER5B DNA MER1_type 0 178 78 466 309 82 21 chr17 32967163 32967396 -52471084 + MIR SINE MIR 13 259 -3 33 43 0 0 chr17 32967896 32967943 -52470537 + AT_rich Low_complexity Low_complexity 1 47 0 2181 110 17 3 chr17 32969877 32970177 -52468303 + AluSp SINE Alu 1 304 -9 496 247 90 75 chr17 32970675 32970930 -52467550 + L1ME4a LINE L1 5841 6099 -22 1219 142 21 29 chr17 32971038 32971277 -52467203 + Tigger7 DNA MER2_type 2255 2491 0 198 271 61 83 chr17 32971315 32971406 -52467074 - L2 LINE L2 -5 3308 3221 2248 92 13 23 chr17 32971406 32971709 -52466771 - AluSq SINE Alu -13 300 1 198 271 61 83 chr17 32971709 32971798 -52466682 - L2 LINE L2 -92 3221 3132 422 252 50 17 chr17 32971799 32971918 -52466562 + MIR SINE MIR 8 130 -132 1837 176 27 0 chr17 32972527 32972828 -52465652 + AluJo SINE Alu 1 309 -3 1798 154 46 0 chr17 32973029 32973314 -52465166 + AluSq SINE Alu 1 298 -15 22 56 0 0 chr17 32973394 32973430 -52465050 + AT_rich Low_complexity Low_complexity 1 36 0 2354 83 20 7 chr17 32973859 32974160 -52464320 + AluSx SINE Alu 1 305 -7 305 287 9 35 chr17 32974277 32974392 -52464088 + L1M4 LINE L1 3073 3184 -2962 418 352 83 42 chr17 32975060 32975357 -52463123 + L2 LINE L2 2352 2676 -638 2020 133 3 17 chr17 32975357 32975659 -52462821 - AluSx SINE Alu -14 298 1 418 352 83 42 chr17 32975659 32975833 -52462647 + L2 LINE L2 2676 2842 -472 1985 130 9 49 chr17 32976082 32976406 -52462074 - AluSx SINE Alu 0 312 2 819 274 26 0 chr17 32976583 32976809 -52461671 + MIR SINE MIR 31 262 0 181 109 43 0 chr17 32977267 32977313 -52461167 + (TA)n Simple_repeat Simple_repeat 1 48 0 1885 152 3 3 chr17 32977313 32977630 -52460850 - AluSx SINE Alu 0 317 1 229 303 15 0 chr17 32977715 32977781 -52460699 + L2 LINE L2 3239 3305 -8 2326 104 155 21 chr17 32978087 32978575 -52459905 + LTR61 LTR ERV1 2 595 0 270 228 0 0 chr17 32979053 32979110 -52459370 + MIR SINE MIR 82 138 -70 309 309 17 101 chr17 32979682 32979860 -52458620 - L2 LINE L2 -88 3184 3022 1113 57 0 7 chr17 32980901 32981041 -52457439 - L1PA15 LINE L1 -3 6162 6024 3346 158 4 13 chr17 32981146 32982017 -52456463 - L1P4 LINE L1 -578 5587 4728 1563 179 0 44 chr17 32982352 32982707 -52455773 - AluJb SINE Alu 0 342 1 532 261 69 78 chr17 32982980 32983225 -52455255 + MIR SINE MIR 5 247 -15 392 295 121 12 chr17 32984138 32984304 -52454176 + MIR3 SINE MIR 16 199 -9 204 312 98 29 chr17 32984984 32985157 -52453323 + L3 LINE CR1 1292 1476 -101 395 248 50 81 chr17 32985696 32985857 -52452623 - MIR SINE MIR -12 250 95 281 356 25 8 chr17 32985992 32986110 -52452370 + MIR SINE MIR 63 182 -80 243 256 154 0 chr17 32986163 32986241 -52452239 + MIR SINE MIR 108 197 -65 467 262 91 32 chr17 32986451 32986638 -52451842 - MIR3 SINE MIR -4 204 7 942 123 38 85 chr17 32986973 32987184 -52451296 - MER3 DNA MER1_type -4 205 5 2059 173 102 48 chr17 32987351 32987830 -52450650 + MLT1D LTR MaLR 1 505 0 339 269 0 0 chr17 32989118 32989196 -52449284 - MER2 DNA MER2_type 0 345 268 2386 90 0 0 chr17 32989320 32989619 -52448861 - AluSx SINE Alu -13 299 1 273 136 0 0 chr17 32989755 32989799 -52448681 - L2 LINE L2 -3 3310 3267 2216 40 0 0 chr17 32989970 32990217 -52448263 + L1PA3 LINE L1 5906 6152 -3 32 57 0 0 chr17 32990217 32990270 -52448210 + AT_rich Low_complexity Low_complexity 1 53 0 2160 129 0 0 chr17 32990416 32990710 -52447770 - AluSg SINE Alu -16 294 1 246 154 0 0 chr17 32991276 32991315 -52447165 - Alu SINE Alu -263 39 1 2059 114 7 17 chr17 32991578 32991740 -52446740 - AluSx SINE Alu -16 296 137 2194 110 0 3 chr17 32991740 32992031 -52446449 - AluSc SINE Alu -19 290 1 2059 114 7 17 chr17 32992031 32992167 -52446313 - AluSx SINE Alu -175 137 1 2881 10 0 0 chr17 32992187 32992498 -52445982 - AluYb8 SINE Alu -7 311 1 186 43 0 0 chr17 32992519 32992542 -52445938 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 420 315 11 88 chr17 32992762 32993022 -52445458 - L2 LINE L2 -196 3076 2837 2097 107 0 4 chr17 32993058 32993371 -52445109 - AluSc SINE Alu 0 312 1 456 149 27 0 chr17 32993503 32993577 -52444903 + MER44D DNA MER2_type 11 356 -253 2971 151 45 36 chr17 32993584 32993980 -52444500 - MER7C DNA MER2_type -2427 601 197 1764 155 87 31 chr17 32993980 32994335 -52444145 + THE1C LTR MaLR 1 375 0 2971 151 45 36 chr17 32994335 32994495 -52443985 - MER7C DNA MER2_type -2831 197 40 1239 145 61 0 chr17 32994512 32994564 -52443916 + MER44D DNA MER2_type 364 411 -2076 1697 148 23 30 chr17 32994564 32994869 -52443611 - AluSx SINE Alu -9 303 1 1239 145 61 0 chr17 32994869 32995044 -52443436 + MER44D DNA MER2_type 411 605 0 415 298 132 67 chr17 32995044 32995347 -52443133 - L2 LINE L2 -680 2634 2352 1918 138 21 3 chr17 32995347 32995637 -52442843 + AluSx SINE Alu 6 300 -12 415 298 132 67 chr17 32995637 32995797 -52442683 - L2 LINE L2 -962 2352 2204 2320 88 3 0 chr17 32995797 32996092 -52442388 + AluY SINE Alu 1 296 -15 415 298 132 67 chr17 32996092 32996211 -52442269 - L2 LINE L2 -1110 2204 2013 1805 199 88 20 chr17 32996221 32996619 -52441861 - MSTB LTR MaLR -1 425 1 2384 73 0 10 chr17 32996632 32996932 -52441548 - AluSc SINE Alu -11 298 2 798 187 0 14 chr17 32996944 32997083 -52441397 - FLAM_C SINE Alu -5 138 2 241 198 9 45 chr17 32997166 32997277 -52441203 + (TATG)n Simple_repeat Simple_repeat 2 108 0 189 171 0 0 chr17 32997282 32997317 -52441163 + (CA)n Simple_repeat Simple_repeat 2 36 0 1789 164 3 22 chr17 32997317 32997634 -52440846 - AluJb SINE Alu -1 311 1 2351 89 3 0 chr17 32998172 32998475 -52440005 - AluSp SINE Alu -9 304 1 1826 147 14 7 chr17 32999022 32999314 -52439166 + AluSx SINE Alu 1 294 -18 1581 158 9 80 chr17 32999532 32999868 -52438612 + AluJb SINE Alu 1 312 0 1911 143 16 13 chr17 33000480 33000788 -52437692 - AluSx SINE Alu -2 310 2 551 255 140 36 chr17 33000888 33001217 -52437263 - L1MC/D LINE L1 -2109 5699 5337 1308 168 191 0 chr17 33001237 33001493 -52436987 - AluSx SINE Alu -7 305 1 841 209 6 18 chr17 33001740 33001903 -52436577 - FRAM SINE Alu -14 162 2 2529 47 7 3 chr17 33002148 33002447 -52436033 + AluY SINE Alu 1 300 -11 216 186 47 0 chr17 33002621 33002664 -52435816 + T-rich Low_complexity Low_complexity 5 49 0 192 125 0 0 chr17 33002666 33002698 -52435782 + (TCCC)n Simple_repeat Simple_repeat 3 34 0 1661 164 23 39 chr17 33002700 33003010 -52435470 - AluJo SINE Alu -7 305 1 700 262 40 87 chr17 33003025 33003110 -52435370 - L1MEd LINE L1 -2712 3417 3330 1954 131 3 3 chr17 33003110 33003412 -52435068 - AluSx SINE Alu 0 302 1 700 262 40 87 chr17 33003412 33003493 -52434987 - L1MEd LINE L1 -2799 3330 3247 2151 74 0 104 chr17 33003493 33003694 -52434786 - AluSq SINE Alu -10 303 149 2404 66 0 0 chr17 33003694 33003995 -52434485 - AluY SINE Alu -10 301 1 2151 74 0 104 chr17 33003995 33004131 -52434349 - AluSq SINE Alu -164 149 1 700 262 40 87 chr17 33004131 33004458 -52434022 - L1MEd LINE L1 -2882 3247 2945 1535 145 0 24 chr17 33004460 33004715 -52433765 - AluJb SINE Alu 0 312 64 295 268 24 0 chr17 33004746 33004828 -52433652 - L1MEd LINE L1 -3166 2963 2880 21 36 0 0 chr17 33004987 33005015 -52433465 + AT_rich Low_complexity Low_complexity 1 28 0 327 281 93 87 chr17 33005054 33005140 -52433340 - L1MEd LINE L1 -4300 2010 1926 2102 138 0 0 chr17 33005140 33005438 -52433042 - AluSx SINE Alu -14 298 1 327 281 93 87 chr17 33005438 33005717 -52432763 - L1MEd LINE L1 -4384 1926 1643 443 303 119 31 chr17 33005817 33006190 -52432290 - L1MEd LINE L1 -4874 1245 906 1653 171 39 7 chr17 33006190 33006476 -52432004 - AluJo SINE Alu -17 295 1 443 303 119 31 chr17 33006476 33006734 -52431746 - L1MEd LINE L1 -5213 906 658 2112 139 3 0 chr17 33006734 33007037 -52431443 + AluSx SINE Alu 1 304 -8 443 303 119 31 chr17 33007037 33007116 -52431364 - L1MEd LINE L1 -5461 658 587 2409 88 3 0 chr17 33007348 33007655 -52430825 + AluSp SINE Alu 1 308 -5 959 69 0 0 chr17 33007805 33007921 -52430559 + AluSp/q SINE Alu 174 289 -24 1829 51 5 0 chr17 33008611 33008826 -52429654 + AluY SINE Alu 83 298 -13 1396 95 0 6 chr17 33009438 33009670 -52428810 - AluSg/x SINE Alu 0 333 103 26 0 0 0 chr17 33010200 33010226 -52428254 + AT_rich Low_complexity Low_complexity 1 26 0 3641 227 123 14 chr17 33010510 33010804 -52427676 - L1MC4 LINE L1 0 8042 7781 1917 152 3 7 chr17 33010804 33011114 -52427366 - AluSx SINE Alu -3 309 1 3641 227 123 14 chr17 33011114 33011956 -52426524 - L1MC4 LINE L1 -261 7781 6686 402 21 0 0 chr17 33011956 33012003 -52426477 + (TG)n Simple_repeat Simple_repeat 2 48 0 3641 227 123 14 chr17 33012003 33012061 -52426419 - L1MC4 LINE L1 -1356 6686 6636 1876 135 17 20 chr17 33012074 33012371 -52426109 + AluSx SINE Alu 1 296 -16 2197 114 0 3 chr17 33012373 33012671 -52425809 + AluSg SINE Alu 1 297 -13 1191 138 0 0 chr17 33012671 33012838 -52425642 + AluSg/x SINE Alu 132 298 -12 433 259 153 5 chr17 33012873 33013062 -52425418 - L1MC4a LINE L1 -1193 6615 6444 1515 188 11 11 chr17 33013377 33013648 -52424832 - AluJb SINE Alu -36 276 6 240 97 0 0 chr17 33013650 33013681 -52424799 - Alu SINE Alu -266 36 6 239 167 0 0 chr17 33013683 33013719 -52424761 - Alu SINE Alu -266 36 1 396 319 59 11 chr17 33013789 33014059 -52424421 - L1 LINE L1 -1129 5017 4735 323 211 99 56 chr17 33014138 33014280 -52424200 - L1 LINE L1 -1549 4597 4450 1625 165 9 38 chr17 33014349 33014665 -52423815 + AluJo SINE Alu 6 312 0 1884 159 0 17 chr17 33014680 33014982 -52423498 + AluJo SINE Alu 1 297 -15 277 388 0 0 chr17 33015122 33015207 -52423273 - L2 LINE L2 -3 3269 3185 23 33 0 0 chr17 33015250 33015280 -52423200 + AT_rich Low_complexity Low_complexity 1 30 0 1621 121 0 9 chr17 33015678 33015909 -52422571 - L1PB1 LINE L1 0 6151 5923 1904 147 0 32 chr17 33015929 33016241 -52422239 - AluSx SINE Alu -10 302 1 649 197 77 0 chr17 33016245 33016362 -52422118 - FLAM_C SINE Alu -16 127 2 237 65 0 0 chr17 33016642 33016673 -52421807 + (TG)n Simple_repeat Simple_repeat 2 32 0 1142 69 0 7 chr17 33016935 33017079 -52421401 - AluSg/x SINE Alu -14 296 154 722 90 0 0 chr17 33017079 33017168 -52421312 - AluY SINE Alu -221 90 2 1202 117 6 0 chr17 33017174 33017337 -52421143 - AluSg/x SINE Alu -15 297 134 1804 163 3 17 chr17 33017337 33017637 -52420843 - AluSx SINE Alu -16 296 1 510 17 0 0 chr17 33018555 33018614 -52419866 + (CA)n Simple_repeat Simple_repeat 2 60 0 1652 191 7 14 chr17 33019168 33019462 -52419018 - AluJb SINE Alu -20 292 1 1254 195 23 65 chr17 33019748 33020055 -52418425 - AluJo SINE Alu -8 294 1 1994 141 0 17 chr17 33020953 33021251 -52417229 - AluSx SINE Alu -13 299 7 2365 91 0 3 chr17 33021416 33021713 -52416767 + AluY SINE Alu 3 298 -13 2166 181 51 22 chr17 33021834 33022288 -52416192 - MLT1C LTR MaLR 0 467 1 416 301 8 45 chr17 33022290 33022423 -52416057 - MLT1C-int LTR MaLR -2 1369 1242 * 1232 219 61 52 chr17 33022422 33022520 -52415960 - MLT1C-int LTR MaLR -95 1276 1180 2204 126 0 3 chr17 33022520 33022822 -52415658 + AluSx SINE Alu 2 302 -10 1232 219 61 52 chr17 33022822 33023051 -52415429 - MLT1C-int LTR MaLR -191 1180 946 189 0 0 0 chr17 33023110 33023131 -52415349 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 834 194 0 0 chr17 33023190 33023324 -52415156 + FAM SINE Alu 1 44 -5 1025 152 0 33 chr17 33023324 33023508 -52414972 - MER47B DNA MER2_type -84 334 157 1289 180 41 34 chr17 33023508 33023655 -52414825 - AluJb SINE Alu -15 297 152 7254 112 19 24 chr17 33023655 33024730 -52413750 - MER11C LTR ERVK -2 1069 1 1289 180 41 34 chr17 33024730 33024877 -52413603 - AluJb SINE Alu -160 152 1 1803 156 121 48 chr17 33025005 33025402 -52413078 + Tigger1 DNA MER2_type 2 427 -1991 * 4683 129 34 7 chr17 33025393 33026131 -52412349 + Tigger1 DNA MER2_type 1326 2083 -335 439 186 0 0 chr17 33026164 33026234 -52412246 + FLAM SINE Alu 50 119 -24 216 0 0 0 chr17 33026236 33026260 -52412220 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 394 241 0 0 chr17 33026280 33026363 -52412117 + Tigger1 DNA MER2_type 2109 2191 -227 534 65 0 39 chr17 33026428 33026505 -52411975 + AluJ/FRAM SINE Alu 231 304 -8 2200 90 3 42 chr17 33026509 33026819 -52411661 + AluY SINE Alu 1 298 -13 204 254 48 32 chr17 33026971 33027034 -52411446 + MIR SINE MIR 14 77 -185 198 215 154 100 chr17 33027037 33027167 -52411313 + MIR SINE MIR 44 180 -82 22 0 0 0 chr17 33028190 33028212 -52410268 + AT_rich Low_complexity Low_complexity 1 22 0 2193 198 63 11 chr17 33028944 33029464 -52409016 - L1MB4 LINE L1 -7 6173 5627 1671 163 39 14 chr17 33029478 33029761 -52408719 - AluJo SINE Alu -22 290 1 283 231 207 0 chr17 33029763 33029884 -52408596 - L1MB4 LINE L1 -816 5330 5185 2020 117 10 29 chr17 33029889 33030196 -52408284 - AluSx SINE Alu -11 301 1 1663 225 136 29 chr17 33030196 33030699 -52407781 + L1M4 LINE L1 4187 4635 -1511 2300 85 3 7 chr17 33030699 33030993 -52407487 + AluY SINE Alu 1 293 -18 2333 117 7 0 chr17 33030995 33031302 -52407178 + AluSx SINE Alu 1 309 -3 1663 225 136 29 chr17 33031302 33031418 -52407062 + L1M4 LINE L1 4635 4876 -1270 1877 164 0 0 chr17 33031421 33031696 -52406784 + AluSx SINE Alu 2 276 -36 420 153 0 0 chr17 33031719 33031778 -52406702 + AluSg/x SINE Alu 213 271 -38 330 211 28 0 chr17 33031778 33031887 -52406593 + GA-rich Low_complexity Low_complexity 1 112 0 1743 190 82 33 chr17 33031888 33032206 -52406274 + L1M4 LINE L1 4868 5215 -944 1836 145 3 53 chr17 33032206 33032524 -52405956 + AluJo SINE Alu 1 302 -10 1743 190 82 33 chr17 33032524 33032737 -52405743 + L1M4 LINE L1 5215 5416 -743 1470 178 0 35 chr17 33032751 33033009 -52405471 + AluJo SINE Alu 51 299 -13 16032 67 14 1 chr17 33033453 33035521 -52402959 + HERVL LTR ERVL 2659 4753 -901 474 285 42 4 chr17 33035537 33035765 -52402715 - L1MC4a LINE L1 -234 5936 5702 276 143 0 0 chr17 33035816 33035865 -52402615 + L1M4 LINE L1 5238 5286 -860 1680 176 21 0 chr17 33035868 33036158 -52402322 + AluJb SINE Alu 2 297 -15 1475 124 0 0 chr17 33036268 33036462 -52402018 + AluSx SINE Alu 2 195 -117 585 213 22 7 chr17 33036473 33036609 -52401871 - MLT1A1 LTR MaLR -203 162 25 272 132 19 0 chr17 33036619 33036672 -52401808 + L1 LINE L1 5188 5241 -905 205 154 0 0 chr17 33036700 33036706 -52401774 + (TA)n Simple_repeat Simple_repeat 1 6 -33 1807 185 0 3 chr17 33036706 33036998 -52401482 + AluJb SINE Alu 1 291 -21 205 154 0 0 chr17 33036998 33037030 -52401450 + (TA)n Simple_repeat Simple_repeat 5 39 0 320 258 43 34 chr17 33037032 33037151 -52401329 + L1MC3 LINE L1 6550 6691 -1137 1048 92 0 29 chr17 33037159 33037333 -52401147 - Tigger7 DNA MER2_type -26 2461 2293 1499 99 0 0 chr17 33037336 33037528 -52400952 - AluSg/x SINE Alu -19 291 100 365 103 17 0 chr17 33037886 33037944 -52400536 + MLT2A1 LTR ERVL 202 260 -184 356 184 38 6 chr17 33038015 33038173 -52400307 + (TA)n Simple_repeat Simple_repeat 2 164 0 318 121 0 45 chr17 33038176 33038242 -52400238 + MLT2B1 LTR ERVL 458 520 0 10338 205 23 35 chr17 33038243 33040462 -52398018 + ERVL-B1 LTR ERVL 2 2194 -3570 1596 103 94 0 chr17 33040563 33040787 -52397693 - AluSq SINE Alu -68 245 1 2220 131 3 0 chr17 33041445 33041757 -52396723 + AluSq SINE Alu 1 313 0 934 147 22 0 chr17 33041777 33041913 -52396567 + AluJo SINE Alu 1 139 -173 452 296 53 7 chr17 33042062 33042214 -52396266 - MIR SINE MIR -21 241 83 2444 82 0 10 chr17 33042281 33042586 -52395894 + AluSq SINE Alu 1 302 -11 494 260 24 16 chr17 33042621 33042748 -52395732 + MER5B DNA MER1_type 50 177 -1 2350 110 0 0 chr17 33043457 33043758 -52394722 - AluSx SINE Alu -11 301 1 452 296 53 7 chr17 33043825 33043977 -52394503 + MIR SINE MIR 83 241 -21 465 246 125 39 chr17 33044222 33044266 -52394214 - L1ME4a LINE L1 -46 6075 6036 2130 116 10 7 chr17 33044266 33044568 -52393912 + AluSc SINE Alu 1 303 -6 465 246 125 39 chr17 33044568 33044779 -52393701 - L1ME4a LINE L1 -85 6036 5798 996 183 16 5 chr17 33044788 33044974 -52393506 - MER5A DNA MER1_type 0 189 2 1717 185 0 3 chr17 33045131 33045417 -52393063 - AluJb SINE Alu -25 287 3 2832 163 20 57 chr17 33045474 33045657 -52392823 + L1MA10 LINE L1 5736 5924 -410 2523 50 0 20 chr17 33045657 33045959 -52392521 - AluY SINE Alu -15 296 1 2832 163 20 57 chr17 33045959 33046387 -52392093 + L1MA10 LINE L1 5924 6324 -10 1870 169 0 23 chr17 33046387 33046694 -52391786 - AluJo SINE Alu -12 300 1 268 352 49 14 chr17 33046893 33047035 -52391445 - L2 LINE L2 -3 3310 3164 627 228 52 92 chr17 33047146 33047492 -52390988 + MER45C DNA AcHobo 118 449 -504 466 255 99 42 chr17 33047580 33047792 -52390688 + MER45C DNA AcHobo 394 617 -336 346 113 19 0 chr17 33047793 33047846 -52390634 + MER45C DNA AcHobo 900 953 0 1786 165 16 3 chr17 33049054 33049375 -52389105 + L1PA16 LINE L1 5822 6146 -20 2398 57 0 3 chr17 33049387 33049712 -52388768 + AluY SINE Alu 3 326 0 1153 176 147 7 chr17 33049717 33050024 -52388456 - MER69 DNA AcHobo -240 2286 1937 2152 106 0 31 chr17 33050265 33050585 -52387895 + AluSg SINE Alu 1 310 0 643 275 62 10 chr17 33050595 33050788 -52387692 + MIR SINE MIR 5 207 -55 247 300 56 0 chr17 33050982 33051072 -52387408 - L2 LINE L2 -9 3263 3169 429 259 65 0 chr17 33051847 33051955 -52386525 + MIR SINE MIR 33 147 -61 292 272 98 63 chr17 33052135 33052373 -52386107 - MLT1K LTR MaLR -51 537 321 515 193 0 50 chr17 33053546 33053665 -52384815 - MIR SINE MIR 0 262 150 1930 113 0 0 chr17 33053767 33054015 -52384465 - AluSq SINE Alu -65 248 1 1674 174 26 45 chr17 33054072 33054383 -52384097 + AluSx SINE Alu 8 312 0 1975 158 3 0 chr17 33054668 33054960 -52383520 + AluJb SINE Alu 1 293 -19 2416 88 7 0 chr17 33055237 33055545 -52382935 - AluSx SINE Alu -2 310 1 3878 147 22 52 chr17 33055545 33055868 -52382612 - L1MB8 LINE L1 -106 6072 5741 1936 139 45 0 chr17 33055868 33056156 -52382324 - AluSx SINE Alu -11 301 1 3878 147 22 52 chr17 33056156 33056509 -52381971 - L1MB8 LINE L1 -437 5741 5379 1613 188 41 54 chr17 33056509 33056877 -52381603 + MLT1A1 LTR MaLR 3 365 0 3878 147 22 52 chr17 33056877 33056924 -52381556 - L1MB8 LINE L1 -799 5379 5332 1950 169 7 0 chr17 33056924 33057232 -52381248 - AluSx SINE Alu -2 310 1 3878 147 22 52 chr17 33057232 33057371 -52381109 - L1MB8 LINE L1 -846 5332 5240 1343 125 64 46 chr17 33057388 33057490 -52380990 + MER44D DNA MER2_type 29 128 -2363 2295 96 0 0 chr17 33057490 33057781 -52380699 + AluSg SINE Alu 1 291 -19 1343 125 64 46 chr17 33057781 33057958 -52380522 + MER44D DNA MER2_type 128 583 -26 334 323 0 0 chr17 33057958 33058054 -52380426 + L1MC4 LINE L1 6610 6705 -1337 320 253 40 40 chr17 33057986 33058085 -52380395 - L1MC3 LINE L1 -1137 6648 6550 * 213 125 0 0 chr17 33058090 33058123 -52380357 + (TA)n Simple_repeat Simple_repeat 2 37 -4 1821 186 0 3 chr17 33058123 33058418 -52380062 - AluJb SINE Alu -18 294 1 213 125 0 0 chr17 33058418 33058424 -52380056 + (TA)n Simple_repeat Simple_repeat 36 41 0 265 120 20 0 chr17 33058455 33058505 -52379975 - L1 LINE L1 -908 5238 5188 585 213 22 7 chr17 33058515 33058651 -52379829 + MLT1A1 LTR MaLR 25 162 -203 1484 119 0 0 chr17 33058662 33058856 -52379624 - AluSx SINE Alu -117 195 2 1694 172 21 0 chr17 33058965 33059255 -52379225 - AluJb SINE Alu -15 297 2 276 143 0 0 chr17 33059258 33059307 -52379173 - L1M4 LINE L1 -860 5286 5238 452 268 53 14 chr17 33059357 33059566 -52378914 + L1ME4a LINE L1 5703 5919 -202 315 147 14 4 chr17 33059611 33059838 -52378642 + AluJo SINE Alu 1 312 0 2105 122 0 34 chr17 33059838 33060168 -52378312 + AluSx SINE Alu 1 320 0 250 116 43 58 chr17 33060241 33060310 -52378170 - Tigger3(Golem) DNA MER2_type -2693 336 269 707 177 0 0 chr17 33060338 33060451 -52378029 - Tigger3(Golem) DNA MER2_type -2916 113 1 937 185 5 11 chr17 33060761 33060945 -52377535 + Tigger6 DNA MER2_type 1414 1596 -1 2304 107 0 13 chr17 33061153 33061463 -52377017 - AluSx SINE Alu -6 306 1 1008 178 0 18 chr17 33061596 33061765 -52376715 - FRAM SINE Alu 0 166 1 32 43 0 0 chr17 33061774 33061820 -52376660 + AT_rich Low_complexity Low_complexity 1 46 0 31 0 0 0 chr17 33061969 33062000 -52376480 + AT_rich Low_complexity Low_complexity 1 31 0 2288 117 10 0 chr17 33062067 33062374 -52376106 - AluSx SINE Alu 0 312 3 925 127 8 8 chr17 33062733 33062867 -52375613 + AluJo SINE Alu 1 134 -178 4400 138 61 35 chr17 33063456 33064472 -52374008 + L1MB4 LINE L1 5135 6168 -12 180 0 0 0 chr17 33064472 33064492 -52373988 + (TA)n Simple_repeat Simple_repeat 1 20 0 4400 138 61 35 chr17 33064492 33064505 -52373975 + L1MB4 LINE L1 6168 6179 -1 314 122 20 0 chr17 33065770 33065819 -52372661 + 5S rRNA rRNA 1 50 -71 1723 165 0 4 chr17 33065839 33066105 -52372375 + AluJb SINE Alu 1 265 -47 1686 186 3 10 chr17 33066714 33067025 -52371455 + AluJo SINE Alu 1 309 -3 841 199 76 21 chr17 33067312 33067548 -52370932 - L1ME3 LINE L1 -20 6142 5894 191 71 0 0 chr17 33067969 33067997 -52370483 - MIR SINE MIR -112 150 123 396 315 34 13 chr17 33068584 33068733 -52369747 + MIR SINE MIR 47 198 -64 535 200 25 8 chr17 33068755 33068875 -52369605 + MER20 DNA MER1_type 98 219 0 540 259 144 4 chr17 33068937 33069173 -52369307 - MER113 DNA MER1_type? -233 288 20 375 279 0 41 chr17 33069597 33069719 -52368761 + L2 LINE L2 2458 2574 -740 495 231 22 50 chr17 33070740 33070779 -52367701 + L1MD3 LINE L1 7819 7858 -137 1762 157 0 27 chr17 33070779 33071078 -52367402 - AluJo SINE Alu -21 291 1 495 231 22 50 chr17 33071078 33071220 -52367260 + L1MD3 LINE L1 7858 7995 0 190 229 115 0 chr17 33071526 33071587 -52366893 - L2 LINE L2 -343 2970 2903 788 299 40 17 chr17 33076496 33077015 -52361465 - L1MC3 LINE L1 -1771 6014 5484 231 313 82 61 chr17 33081739 33081886 -52356594 + MIR SINE MIR 94 243 -19 1696 186 21 3 chr17 33082921 33083259 -52355221 - MER2 DNA MER2_type 0 344 1 183 80 0 0 chr17 33083338 33083363 -52355117 + (TCCA)n Simple_repeat Simple_repeat 4 28 0 701 165 133 19 chr17 33083709 33083867 -52354613 - THE1C LTR MaLR 0 375 200 1990 89 4 0 chr17 33083869 33084117 -52354363 - AluSx SINE Alu -63 249 1 2289 96 3 22 chr17 33084124 33084437 -52354043 - AluSx SINE Alu -5 307 1 2405 86 13 0 chr17 33084445 33084747 -52353733 - AluSg SINE Alu -4 306 1 22 0 0 0 chr17 33085326 33085348 -52353132 + AT_rich Low_complexity Low_complexity 1 22 0 183 247 0 96 chr17 33086656 33086729 -52351751 - MIR SINE MIR -10 252 187 2366 99 0 10 chr17 33087276 33087588 -52350892 - AluSg SINE Alu -1 309 1 364 290 23 15 chr17 33088048 33088179 -52350301 + Charlie8 DNA MER1_type 37 168 -2249 1035 58 0 0 chr17 33088180 33088301 -52350179 + AluSp SINE Alu 1 121 -192 1680 126 4 16 chr17 33088480 33088727 -52349753 - AluSx SINE Alu -5 307 64 2470 84 0 0 chr17 33089245 33089541 -52348939 + AluSc SINE Alu 1 296 -13 1472 175 77 25 chr17 33089573 33089859 -52348621 + AluJb SINE Alu 1 301 -11 2244 114 0 3 chr17 33090614 33090920 -52347560 + AluSg SINE Alu 1 305 -5 370 244 64 45 chr17 33091400 33091556 -52346924 + L1MC4 LINE L1 6811 6969 -1073 1643 199 6 10 chr17 33091614 33091926 -52346554 + AluJb SINE Alu 2 312 0 849 174 61 88 chr17 33091927 33092221 -52346259 + L1MC5 LINE L1 6906 7191 -770 613 205 139 12 chr17 33092236 33092402 -52346078 - MER20 DNA MER1_type 0 219 33 587 230 20 0 chr17 33092515 33092667 -52345813 + L1MC5 LINE L1 7311 7465 -496 202 234 0 0 chr17 33092747 33092794 -52345686 + A-rich Low_complexity Low_complexity 1 47 0 982 198 86 0 chr17 33092801 33092998 -52345482 + AluJb SINE Alu 92 305 -7 2698 137 15 28 chr17 33093290 33093763 -52344717 + MLT1C LTR MaLR 1 467 0 2285 109 0 0 chr17 33093914 33094216 -52344264 + AluSg1 SINE Alu 1 302 -7 1429 132 0 10 chr17 33094264 33094468 -52344012 + AluSq SINE Alu 33 234 -79 503 171 0 0 chr17 33094478 33094566 -52343914 + AluJb SINE Alu 213 300 -12 2222 131 0 10 chr17 33094567 33094872 -52343608 + AluSg SINE Alu 1 302 -8 2179 125 0 16 chr17 33094882 33095193 -52343287 + AluSc SINE Alu 1 306 -3 403 245 99 26 chr17 33095196 33095388 -52343092 + L1MC4a LINE L1 7034 7239 -569 2109 135 0 0 chr17 33095390 33095687 -52342793 + AluSx SINE Alu 1 297 -15 309 260 21 0 chr17 33095687 33095776 -52342704 + L1MC4 LINE L1 7808 7901 -141 1822 166 3 0 chr17 33096234 33096517 -52341963 + AluSx SINE Alu 12 295 -17 2537 75 0 0 chr17 33096519 33096824 -52341656 + AluY SINE Alu 1 305 -6 202 350 17 0 chr17 33096978 33097038 -52341442 + MIR SINE MIR 17 77 -185 229 247 0 90 chr17 33097041 33097130 -52341350 + MIR SINE MIR 44 124 -138 26 0 0 0 chr17 33097470 33097496 -52340984 + AT_rich Low_complexity Low_complexity 1 26 0 186 278 42 0 chr17 33098257 33098329 -52340151 + MIR SINE MIR 132 206 -56 1853 124 0 29 chr17 33098539 33098813 -52339667 + AluSx SINE Alu 30 295 -17 400 311 104 0 chr17 33098950 33099114 -52339366 - MIR SINE MIR -19 243 63 306 289 104 39 chr17 33099171 33099528 -52338952 - L1ME4a LINE L1 -167 5954 5575 693 246 103 18 chr17 33099600 33099824 -52338656 - MIR SINE MIR -11 251 9 340 285 90 86 chr17 33100735 33101089 -52337391 - L1ME4a LINE L1 -47 6074 5716 972 214 41 23 chr17 33101089 33101309 -52337171 - MER58A DNA MER1_type 0 224 1 340 285 90 86 chr17 33101309 33101455 -52337025 - L1ME4a LINE L1 -405 5716 5572 359 217 108 0 chr17 33101756 33101786 -52336694 - L1MA9 LINE L1 0 6312 6283 546 297 62 75 chr17 33101786 33101842 -52336638 - L1MD2 LINE L1 -216 6143 6088 3979 166 57 25 chr17 33101842 33103036 -52335444 - L1MA9 LINE L1 -198 6114 4873 319 49 39 0 chr17 33103040 33103097 -52335383 - MER41A LTR ERV1 -76 478 418 286 242 0 0 chr17 33103097 33103163 -52335317 - L1MD2 LINE L1 -1261 4885 4820 2896 19 0 0 chr17 33103173 33103486 -52334994 - AluYb8 SINE Alu -5 313 1 441 297 21 14 chr17 33103486 33103631 -52334849 - MIR SINE MIR -97 165 20 541 217 17 0 chr17 33103641 33103761 -52334719 - MER20 DNA MER1_type 0 219 98 407 286 41 14 chr17 33103784 33103931 -52334549 - MIR SINE MIR -65 197 47 181 118 0 0 chr17 33104521 33104555 -52333925 + MIR SINE MIR 123 156 -106 1889 166 3 7 chr17 33104855 33105162 -52333318 + AluJo SINE Alu 1 306 -6 299 264 25 16 chr17 33107302 33107423 -52331057 - MER113 DNA MER1_type? -380 141 20 342 287 0 41 chr17 33107847 33107969 -52330511 + L2 LINE L2 2458 2574 -740 533 241 29 105 chr17 33108857 33109029 -52329451 + L1MD3 LINE L1 7705 7844 -151 1740 157 0 33 chr17 33109029 33109328 -52329152 - AluJo SINE Alu -23 289 1 533 241 29 105 chr17 33109328 33109470 -52329010 + L1MD3 LINE L1 7844 7995 0 955 300 39 17 chr17 33114705 33115241 -52323239 - L1MC3 LINE L1 -1754 6031 5484 231 313 82 61 chr17 33119962 33120109 -52318371 + MIR SINE MIR 94 243 -19 1785 188 12 3 chr17 33121144 33121485 -52316995 - MER2 DNA MER2_type 0 344 1 243 61 0 0 chr17 33121804 33121837 -52316643 + (CTGGGG)n Simple_repeat Simple_repeat 3 35 0 1453 165 109 26 chr17 33121942 33122282 -52316198 - THE1C LTR MaLR -1 374 7 258 116 0 0 chr17 33123087 33123130 -52315350 + (CCCCCA)n Simple_repeat Simple_repeat 4 46 0 272 231 20 7 chr17 33123456 33123603 -52314877 + GA-rich Low_complexity Low_complexity 2 150 0 282 56 0 0 chr17 33124118 33124154 -52314326 + (TG)n Simple_repeat Simple_repeat 2 37 0 2976 139 15 8 chr17 33124352 33124833 -52313647 - MER1A DNA MER1_type 0 529 46 617 198 25 0 chr17 33125027 33125148 -52313332 - MLT1C LTR MaLR 0 467 344 240 362 124 34 chr17 33125838 33126225 -52312255 + L2 LINE L2 987 1408 -1906 229 329 131 25 chr17 33126413 33126687 -52311793 + L2 LINE L2 1791 2093 -1221 350 267 78 0 chr17 33126689 33126779 -52311701 - MER117 DNA MER1_type -97 100 4 1389 94 0 6 chr17 33127157 33127338 -52311142 + AluSg SINE Alu 1 180 -130 1079 293 79 51 chr17 33128133 33128923 -52309557 - HAL1 LINE L1 -608 1899 1082 567 164 136 0 chr17 33128923 33129033 -52309447 - FLAM_C SINE Alu -7 126 2 1079 293 79 51 chr17 33129033 33129086 -52309394 - HAL1 LINE L1 -1425 1082 1032 2180 123 13 0 chr17 33129099 33129401 -52309079 - AluSx SINE Alu -6 306 1 249 344 0 0 chr17 33129410 33129474 -52309006 - HAL1 LINE L1 -1652 855 792 2147 123 0 3 chr17 33130671 33130954 -52307526 + AluSx SINE Alu 1 304 -8 1203 90 11 0 chr17 33130954 33131131 -52307349 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 459 157 0 0 chr17 33134012 33134101 -52304379 + GA-rich Low_complexity Low_complexity 2 90 0 1726 164 70 3 chr17 33134270 33134556 -52303924 + AluSx SINE Alu 1 305 -7 2073 133 0 31 chr17 33134828 33135145 -52303335 - AluJb SINE Alu 0 312 6 1582 164 25 25 chr17 33136287 33136605 -52301875 + AluJo SINE Alu 1 318 0 180 0 0 0 chr17 33138092 33138112 -52300368 + (CA)n Simple_repeat Simple_repeat 1 20 0 871 167 15 128 chr17 33138794 33138998 -52299482 + MLT1C LTR MaLR 210 467 0 3066 146 0 8 chr17 33139189 33139677 -52298803 + MER1A DNA MER1_type 46 529 0 600 244 0 0 chr17 33139890 33140070 -52298410 + (CA)n Simple_repeat Simple_repeat 1 180 0 272 231 20 7 chr17 33140586 33140733 -52297747 + CT-rich Low_complexity Low_complexity 2 150 0 258 116 0 0 chr17 33141059 33141102 -52297378 + (TGGGGG)n Simple_repeat Simple_repeat 4 46 0 210 216 0 59 chr17 33141161 33141212 -52297268 + C-rich Low_complexity Low_complexity 1 48 0 1475 162 109 26 chr17 33141915 33142255 -52296225 + THE1C LTR MaLR 7 374 -1 330 26 0 0 chr17 33142360 33142399 -52296081 + (CCCCAG)n Simple_repeat Simple_repeat 3 41 0 1685 193 24 3 chr17 33142718 33143055 -52295425 + MER2 DNA MER2_type 1 344 0 231 313 82 61 chr17 33144090 33144237 -52294243 - MIR SINE MIR -19 243 94 936 319 37 11 chr17 33148957 33149624 -52288856 + L1MC4 LINE L1 5479 6156 -1629 184 229 115 0 chr17 33154370 33154431 -52284049 + L2 LINE L2 2903 2970 -343 533 241 29 105 chr17 33154737 33154879 -52283601 - L1MD3 LINE L1 0 7995 7889 1693 164 0 33 chr17 33154879 33155178 -52283302 + AluJo SINE Alu 1 289 -23 533 241 29 105 chr17 33155178 33155350 -52283130 - L1MD3 LINE L1 -106 7889 7705 342 287 0 41 chr17 33156238 33156360 -52282120 - L2 LINE L2 -740 2574 2458 299 264 25 16 chr17 33156784 33156905 -52281575 + MER113 DNA MER1_type? 20 141 -380 1875 169 3 7 chr17 33159053 33159360 -52279120 - AluJo SINE Alu -6 306 1 181 118 0 0 chr17 33159660 33159694 -52278786 - MIR SINE MIR -106 156 123 445 277 34 14 chr17 33160284 33160432 -52278048 + MIR SINE MIR 47 197 -65 541 217 17 0 chr17 33160455 33160575 -52277905 + MER20 DNA MER1_type 98 219 0 431 303 21 14 chr17 33160585 33160730 -52277750 + MIR SINE MIR 20 165 -97 294 242 0 0 chr17 33160730 33160796 -52277684 + L1MD2 LINE L1 4820 4885 -1261 319 49 39 0 chr17 33160796 33160853 -52277627 + MER41A LTR ERV1 418 478 -76 3893 162 59 28 chr17 33160859 33162053 -52276427 + L1MA9 LINE L1 4873 6114 -198 547 312 55 68 chr17 33161654 33162109 -52276371 + L1MD2 LINE L1 5695 6143 -216 * 365 232 56 0 chr17 33162019 33162144 -52276336 + L1MA9 LINE L1 6180 6311 -1 * 327 284 86 92 chr17 33162433 33162579 -52275901 + L1ME4a LINE L1 5572 5717 -404 964 214 41 23 chr17 33162579 33162799 -52275681 + MER58A DNA MER1_type 1 224 0 327 284 86 92 chr17 33162799 33163187 -52275293 + L1ME4a LINE L1 5717 6103 -18 666 248 104 18 chr17 33164066 33164288 -52274192 + MIR SINE MIR 11 251 -11 258 282 102 39 chr17 33164346 33164679 -52273801 + L1ME4a LINE L1 5558 5911 -210 440 300 111 0 chr17 33164772 33164952 -52273528 + MIR SINE MIR 63 262 0 1892 117 0 29 chr17 33165072 33165346 -52273134 - AluSx SINE Alu -17 295 30 189 259 111 0 chr17 33165559 33165640 -52272840 - MIR SINE MIR -56 206 117 228 265 64 34 chr17 33166216 33166326 -52272154 + MIR SINE MIR 46 145 -63 390 366 41 0 chr17 33166392 33166564 -52271916 + MER91A DNA MER1_type 1 179 -17 298 250 69 0 chr17 33166573 33166645 -52271835 + MER91A DNA MER1_type 119 195 -1 22 80 0 0 chr17 33168550 33168600 -52269880 + AT_rich Low_complexity Low_complexity 1 50 0 414 323 175 0 chr17 33168692 33168909 -52269571 + MIR SINE MIR 3 257 -5 407 325 88 26 chr17 33168952 33169293 -52269187 + L1MC4a LINE L1 5575 5936 -185 434 293 38 8 chr17 33169353 33169486 -52268994 + MIR SINE MIR 40 176 -86 2084 159 0 0 chr17 33169506 33169815 -52268665 - AluSx SINE Alu -3 309 1 281 282 16 48 chr17 33170224 33170348 -52268132 - MIR SINE MIR -140 122 3 586 250 88 29 chr17 33170407 33170647 -52267833 - MIR SINE MIR -7 255 2 357 336 57 0 chr17 33171093 33171215 -52267265 + MIR SINE MIR 62 190 -72 234 270 102 0 chr17 33171499 33171637 -52266843 + MIR SINE MIR 98 252 -10 603 154 26 115 chr17 33171928 33172084 -52266396 + FLAM_A SINE Alu 1 142 0 377 368 5 42 chr17 33172178 33172368 -52266112 + L1MC4a LINE L1 5736 5918 -1890 1701 261 102 9 chr17 33172929 33173585 -52264895 + L1M4 LINE L1 4377 5093 -1053 338 109 0 0 chr17 33173603 33173658 -52264822 - AluSp/q SINE Alu 0 303 249 713 190 112 34 chr17 33173686 33173865 -52264615 - L1PB4 LINE L1 0 6156 5964 1479 218 30 22 chr17 33173866 33174228 -52264252 + MLT1A1 LTR MaLR 1 365 0 2658 214 9 25 chr17 33174739 33175310 -52263170 - MER68 LTR ERV1 0 562 1 2036 191 0 3 chr17 33175373 33175739 -52262741 + MLT1A1 LTR MaLR 1 365 0 1462 325 25 12 chr17 33175788 33176385 -52262095 - ERVL LTR ERVL -3451 2313 1709 268 215 11 11 chr17 33176386 33176479 -52262001 + CT-rich Low_complexity Low_complexity 1 93 0 263 331 25 43 chr17 33176563 33176726 -52261754 - ERVL LTR ERVL -4729 1035 876 2299 93 0 13 chr17 33177483 33177785 -52260695 + AluY SINE Alu 1 298 -13 1147 218 17 3 chr17 33178067 33178365 -52260115 - L1M4 LINE L1 -1360 4786 4485 8748 41 1 4 chr17 33179417 33180389 -52258091 - LTR5 LTR ERVK 0 969 1 2033 159 0 6 chr17 33180440 33180754 -52257726 + AluJb SINE Alu 1 312 0 180 0 0 0 chr17 33180876 33180896 -52257584 + (TCTA)n Simple_repeat Simple_repeat 3 22 0 30 0 0 0 chr17 33181104 33181134 -52257346 + AT_rich Low_complexity Low_complexity 1 30 0 1372 219 33 12 chr17 33181258 33181591 -52256889 - MER58B DNA MER1_type -1 340 1 2080 109 0 0 chr17 33181643 33181909 -52256571 - AluSx SINE Alu -46 266 1 2171 121 45 22 chr17 33181996 33182352 -52256128 + THE1B LTR MaLR 1 364 0 241 330 119 32 chr17 33183041 33183259 -52255221 + L2 LINE L2 2943 3179 -93 1062 223 40 80 chr17 33184260 33184587 -52253893 + LTR53 LTR ERVL 192 505 -14 2132 113 0 7 chr17 33185620 33185922 -52252558 - AluSx SINE Alu -10 302 3 21 0 0 0 chr17 33186103 33186124 -52252356 + AT_rich Low_complexity Low_complexity 1 21 0 686 295 38 53 chr17 33186431 33186859 -52251621 + ERVL LTR ERVL 4966 5432 -324 1001 330 87 18 chr17 33187538 33188044 -52250436 - ERVL LTR ERVL -2143 3621 3081 724 319 44 34 chr17 33188085 33188495 -52249985 - ERVL LTR ERVL -2870 2894 2481 14927 124 32 28 chr17 33188893 33189231 -52249249 - Tigger1 DNA MER2_type 0 2418 2083 1957 149 0 0 chr17 33189231 33189539 -52248941 - AluSx SINE Alu 0 312 5 14927 124 32 28 chr17 33189539 33191609 -52246871 - Tigger1 DNA MER2_type -335 2083 1 2224 117 0 0 chr17 33193753 33194061 -52244419 + AluSg SINE Alu 1 308 -2 2324 205 46 52 chr17 33194322 33195140 -52243340 + LTR28 LTR ERV1 1 1473 -141 394 254 14 72 chr17 33195140 33195278 -52243202 + MER52A LTR ERV1 1597 1726 -29 618 293 60 57 chr17 33195669 33195877 -52242603 - L1ME4a LINE L1 -111 6010 5804 1520 170 21 21 chr17 33195877 33196160 -52242320 + AluJb SINE Alu 7 289 -23 618 293 60 57 chr17 33196160 33196480 -52242000 - L1ME4a LINE L1 -317 5804 5480 265 317 61 20 chr17 33196794 33196947 -52241533 - MIR SINE MIR -1 261 103 3613 65 2 0 chr17 33197912 33198355 -52240125 + MLT2A1 LTR ERVL 1 444 0 202 248 191 19 chr17 33198476 33198581 -52239899 + MIR SINE MIR 13 135 -127 6998 66 6 3 chr17 33198788 33199889 -52238591 - L1PA8 LINE L1 0 6172 5074 2723 145 7 0 chr17 33200457 33200898 -52237582 + L1PB3 LINE L1 5711 6154 0 3699 118 8 2 chr17 33200919 33201443 -52237037 - MER1A DNA MER1_type 0 527 1 189 0 0 0 chr17 33202769 33202790 -52235690 + (T)n Simple_repeat Simple_repeat 1 21 0 3029 80 57 7 chr17 33204089 33204129 -52234351 - MLT2A1 LTR ERVL 0 444 407 355 52 35 0 chr17 33204129 33204187 -52234293 + (TAGA)n Simple_repeat Simple_repeat 3 62 0 3029 80 57 7 chr17 33204187 33204569 -52233911 - MLT2A1 LTR ERVL -37 407 1 3913 60 6 23 chr17 33204569 33205088 -52233392 - HERVL-A1 LTR ERVL 0 5654 5145 * 17793 58 17 0 chr17 33205085 33207222 -52231258 - HERVL-A1 LTR ERVL -991 4663 2491 6980 119 17 35 chr17 33207220 33208594 -52229886 - HERVL-A1 LTR ERVL -4412 1352 1 * 1700 95 32 17 chr17 33208594 33208940 -52229540 - MLT2A1 LTR ERVL 0 444 1 495 240 68 36 chr17 33209048 33209292 -52229188 - MER41B LTR ERV1 -205 430 53 332 149 75 0 chr17 33209874 33209941 -52228539 + MIR SINE MIR 107 178 -84 1928 167 3 0 chr17 33209965 33210282 -52228198 - 7SLRNA srpRNA srpRNA 0 320 3 191 275 50 50 chr17 33210287 33210367 -52228113 + MIR SINE MIR 175 254 -8 1188 188 140 45 chr17 33210687 33210915 -52227565 + MER2 DNA MER2_type 2 270 -75 1606 186 13 3 chr17 33210915 33211221 -52227259 - AluJo SINE Alu -3 309 1 1188 188 140 45 chr17 33211221 33211306 -52227174 + MER2 DNA MER2_type 270 345 0 1896 177 97 40 chr17 33212593 33213068 -52225412 - MLT1D LTR MaLR 0 505 4 1054 138 24 48 chr17 33213238 33213448 -52225032 + MER3 DNA MER1_type 5 209 0 450 269 77 28 chr17 33213784 33213966 -52224514 + MIR3 SINE MIR 14 204 -4 245 269 154 0 chr17 33214172 33214250 -52224230 - MIR SINE MIR -65 197 108 340 335 105 7 chr17 33214269 33214421 -52224059 - MIR SINE MIR -33 229 63 375 292 39 67 chr17 33214551 33214729 -52223751 + MIR SINE MIR 90 262 0 282 293 24 24 chr17 33215292 33215415 -52223065 - L3 LINE CR1 -163 1414 1292 408 301 121 12 chr17 33216085 33216251 -52222229 - MIR3 SINE MIR -9 199 16 588 272 86 39 chr17 33217163 33217395 -52221085 - MIR SINE MIR -15 247 5 1452 196 11 4 chr17 33217668 33217983 -52220497 + AluJb SINE Alu 1 317 0 6767 78 2 14 chr17 33218318 33219778 -52218702 + L1PA15 LINE L1 4728 6162 -3 217 238 238 10 chr17 33220158 33220259 -52218221 - L2 LINE L2 -5 3267 3144 288 320 22 90 chr17 33220829 33221007 -52217473 + L2 LINE L2 3028 3193 -79 254 284 147 0 chr17 33221570 33221665 -52216815 - MIR SINE MIR -70 138 30 231 306 0 0 chr17 33222366 33222428 -52216052 - L2 LINE L2 -8 3305 3244 2135 114 0 3 chr17 33222514 33222811 -52215669 + AluSx SINE Alu 1 296 -16 343 228 59 20 chr17 33222825 33222926 -52215554 - L1ME4a LINE L1 -4 6117 6013 278 261 31 46 chr17 33223016 33223146 -52215334 - L1ME4a LINE L1 -279 5842 5715 830 297 18 4 chr17 33223278 33223507 -52214973 - MIR SINE MIR 0 262 31 2081 98 3 46 chr17 33223682 33224008 -52214472 + AluSx SINE Alu 1 312 0 364 355 82 57 chr17 33224242 33224425 -52214055 - L2 LINE L2 -463 2851 2674 1784 135 0 21 chr17 33224425 33224870 -52213610 + AluSx SINE Alu 1 439 0 364 355 82 57 chr17 33224870 33225171 -52213309 - L2 LINE L2 -640 2674 2352 828 71 47 24 chr17 33225835 33226004 -52212476 + CT-rich Low_complexity Low_complexity 2 174 0 1995 108 27 3 chr17 33226106 33226403 -52212077 - AluSx SINE Alu -4 308 5 261 57 0 0 chr17 33226482 33226517 -52211963 + (TG)n Simple_repeat Simple_repeat 2 36 0 1083 112 0 0 chr17 33226517 33226669 -52211811 - L1PA13 LINE L1 -15 6148 5997 311 322 11 0 chr17 33226756 33226846 -52211634 - L2 LINE L2 0 3272 3182 188 150 75 25 chr17 33227287 33227327 -52211153 + MIR SINE MIR 157 198 -64 697 302 40 9 chr17 33227359 33227581 -52210899 + MIR SINE MIR 33 261 -1 532 301 48 99 chr17 33229061 33229626 -52208854 - L1ME4a LINE L1 -8 6113 5578 25 65 0 0 chr17 33231827 33231873 -52206607 + AT_rich Low_complexity Low_complexity 1 46 0 517 337 20 25 chr17 33232415 33232617 -52205863 - MIR SINE MIR -49 213 13 276 253 50 30 chr17 33232754 33232853 -52205627 + MER5B DNA MER1_type 78 178 0 395 259 82 120 chr17 33233290 33233782 -52204698 + L1ME4a LINE L1 5606 6081 -40 198 0 0 0 chr17 33234001 33234023 -52204457 + (TC)n Simple_repeat Simple_repeat 1 22 0 * 462 36 0 0 chr17 33234022 33234078 -52204402 + (CA)n Simple_repeat Simple_repeat 1 56 0 2305 101 3 3 chr17 33234654 33234962 -52203518 - AluSg SINE Alu -2 308 1 594 194 103 24 chr17 33235447 33235612 -52202868 + MER5A DNA MER1_type 11 188 -1 585 265 75 46 chr17 33236888 33237194 -52201286 - L1ME4a LINE L1 -225 5896 5582 393 343 0 0 chr17 33239904 33240041 -52198439 - MIR SINE MIR -77 185 49 2051 129 3 0 chr17 33240192 33240508 -52197972 - AluSx SINE Alu 0 317 1 772 296 9 0 chr17 33240701 33240921 -52197559 + MER58A DNA MER1_type 3 224 0 344 316 97 45 chr17 33241112 33241220 -52197260 + L1MC4a LINE L1 5563 5664 -2144 2038 134 3 0 chr17 33241220 33241510 -52196970 + AluSx SINE Alu 1 291 -21 344 316 97 45 chr17 33241510 33241689 -52196791 + L1MC4a LINE L1 5664 5865 -1943 309 26 0 0 chr17 33242218 33242256 -52196224 + (CA)n Simple_repeat Simple_repeat 2 39 0 357 252 89 16 chr17 33242701 33242912 -52195568 + MLT1J2 LTR MaLR 63 330 -120 748 245 27 0 chr17 33242918 33243102 -52195378 + MER5A DNA MER1_type 1 189 0 1786 164 3 14 chr17 33243529 33243821 -52194659 + AluJo SINE Alu 2 290 -22 317 365 54 0 chr17 33244084 33244232 -52194248 - MER91A DNA MER1_type -2 194 39 410 250 0 10 chr17 33244321 33244417 -52194063 + MER94 DNA DNA 40 134 0 2226 101 3 0 chr17 33244954 33245264 -52193216 + AluSq SINE Alu 1 311 0 497 281 79 101 chr17 33245664 33245700 -52192780 + MLT1K LTR MaLR 182 217 -371 1283 189 30 107 chr17 33245700 33246065 -52192415 - MER58B DNA MER1_type -4 337 1 497 281 79 101 chr17 33246065 33246444 -52192036 + MLT1K LTR MaLR 217 588 0 2283 131 39 152 chr17 33246962 33247548 -52190932 - MLT2B1 LTR ERVL 0 520 1 776 198 12 12 chr17 33247902 33248074 -52190406 + MER5B DNA MER1_type 1 172 -6 620 154 231 19 chr17 33248205 33248361 -52190119 - MER53 DNA DNA 0 189 1 1016 74 27 20 chr17 33250750 33250899 -52187581 - L1PA13 LINE L1 0 6163 6014 1502 166 63 46 chr17 33251197 33251481 -52186999 + AluJo SINE Alu 1 289 -23 372 307 27 27 chr17 33251524 33251674 -52186806 - MLT1L LTR MaLR -124 491 342 1951 184 17 14 chr17 33252183 33252530 -52185950 - MER7A DNA MER2_type 0 346 1 377 303 43 19 chr17 33252631 33252650 -52185830 - L1ME LINE L1 -373 5748 5731 2199 135 0 0 chr17 33252650 33252947 -52185533 - AluSx SINE Alu -15 297 1 377 303 43 19 chr17 33252947 33253089 -52185391 - L1ME LINE L1 -390 5731 5583 411 316 51 0 chr17 33254929 33255125 -52183355 + L1MEc LINE L1 1597 1802 -4594 633 260 43 25 chr17 33256434 33256669 -52181811 - L1ME LINE L1 -983 5163 4925 1211 206 97 77 chr17 33256698 33257101 -52181379 - MLT2B1 LTR ERVL 0 520 110 230 270 40 0 chr17 33257108 33257182 -52181298 - L1ME LINE L1 -1312 4834 4758 1830 278 55 48 chr17 33257183 33257320 -52181160 - HERV16 LTR ERVL -2077 2919 2784 2444 97 3 0 chr17 33257320 33257631 -52180849 - AluSp SINE Alu -1 312 1 1830 278 55 48 chr17 33257631 33258206 -52180274 - HERV16 LTR ERVL -2212 2784 2202 1769 288 37 61 chr17 33258204 33258954 -52179526 - HERV16 LTR ERVL -3444 1552 821 * 225 316 44 37 chr17 33258986 33259122 -52179358 + L1ME3A LINE L1 3507 3643 -2572 426 235 25 0 chr17 33259123 33259242 -52179238 + L1ME3A LINE L1 4957 5078 -1137 559 209 0 0 chr17 33259341 33259451 -52179029 + AluSg/x SINE Alu 198 307 -3 1040 229 33 33 chr17 33259454 33259786 -52178694 + L1ME3A LINE L1 5119 5450 -765 1519 204 152 18 chr17 33259846 33260288 -52178192 + MLT1D LTR MaLR 1 501 -4 913 277 127 3 chr17 33260326 33260633 -52177847 + MLT1H1 LTR MaLR 10 354 -201 2513 85 0 0 chr17 33260946 33261252 -52177228 - AluSc SINE Alu -3 306 1 314 281 21 0 chr17 33263863 33263959 -52174521 - MIR SINE MIR -87 121 24 400 269 39 8 chr17 33265199 33265329 -52173151 + MIR3 SINE MIR 60 193 -15 2112 109 6 67 chr17 33265456 33265786 -52172694 + AluSg SINE Alu 1 310 0 561 273 10 68 chr17 33266192 33266397 -52172083 + MER91A DNA MER1_type 1 193 -3 338 247 53 146 chr17 33266666 33266913 -52171567 + L2 LINE L2 3031 3254 -18 1755 188 47 52 chr17 33267250 33267292 -52171188 + L1ME3A LINE L1 5763 5804 -435 2500 85 3 0 chr17 33267292 33267599 -52170881 + AluSp SINE Alu 1 308 -5 1755 188 47 52 chr17 33267599 33268045 -52170435 + L1ME3A LINE L1 5804 6232 -7 2755 125 9 24 chr17 33268219 33268589 -52169891 + L1MB4 LINE L1 5454 5817 -363 2383 102 0 0 chr17 33268589 33268893 -52169587 + AluY SINE Alu 2 305 -6 2755 125 9 24 chr17 33268893 33268977 -52169503 + L1MB4 LINE L1 5817 5901 -279 739 259 94 43 chr17 33268977 33269305 -52169175 - L1M4 LINE L1 -1236 4910 4566 309 236 28 0 chr17 33269333 33269405 -52169075 - MIR SINE MIR -112 150 77 819 127 56 0 chr17 33269738 33269864 -52168616 + FLAM_C SINE Alu 1 133 0 2119 97 0 0 chr17 33269888 33270157 -52168323 - AluY SINE Alu -16 295 27 2419 79 26 3 chr17 33270208 33270511 -52167969 - AluSg SINE Alu 0 310 1 313 301 115 6 chr17 33270691 33270847 -52167633 + MLT1K LTR MaLR 23 195 -393 4296 123 13 0 chr17 33271340 33271967 -52166513 + MER41B LTR ERV1 1 635 0 1961 100 4 0 chr17 33272813 33273064 -52165416 + AluSg SINE Alu 46 297 -13 686 272 130 0 chr17 33274138 33274377 -52164103 - L2 LINE L2 -2025 1289 1020 1907 162 0 0 chr17 33274384 33274681 -52163799 - AluJb SINE Alu -13 299 3 375 284 28 0 chr17 33274744 33274853 -52163627 + MIR3 SINE MIR 47 158 -50 2388 86 0 6 chr17 33274979 33275011 -52163469 - AluY SINE Alu 0 311 280 189 0 0 0 chr17 33275011 33275032 -52163448 + (TTG)n Simple_repeat Simple_repeat 1 21 0 2388 86 0 6 chr17 33275032 33275312 -52163168 - AluY SINE Alu -31 280 1 414 217 0 0 chr17 33275504 33275596 -52162884 + MER5A DNA MER1_type 13 104 -85 216 195 0 0 chr17 33276226 33276267 -52162213 - L2 LINE L2 -216 3056 3016 261 238 11 17 chr17 33276310 33276491 -52161989 + (CA)n Simple_repeat Simple_repeat 1 180 0 293 258 0 0 chr17 33276511 33276577 -52161903 + (CA)n Simple_repeat Simple_repeat 1 66 0 1636 172 3 20 chr17 33276701 33277004 -52161476 + AluSx SINE Alu 1 298 -14 282 271 143 14 chr17 33277053 33277193 -52161287 + MIR3 SINE MIR 34 191 -17 3105 159 104 18 chr17 33277444 33278060 -52160420 - L1MB8 LINE L1 -5 6173 5505 2262 109 0 22 chr17 33278069 33278381 -52160099 - AluSx SINE Alu -7 305 1 2319 98 3 0 chr17 33278570 33278865 -52159615 - AluSp SINE Alu -17 296 1 2163 125 3 7 chr17 33279525 33279828 -52158652 - AluSx SINE Alu -10 302 1 1847 168 3 3 chr17 33280049 33280347 -52158133 + AluSx SINE Alu 1 298 -14 974 312 81 6 chr17 33280590 33281104 -52157376 + L1ME4a LINE L1 5320 5905 -216 30 27 0 0 chr17 33281240 33281277 -52157203 + AT_rich Low_complexity Low_complexity 1 37 0 2480 53 0 0 chr17 33281346 33281653 -52156827 + AluY SINE Alu 1 307 0 21 36 0 0 chr17 33281776 33281804 -52156676 + AT_rich Low_complexity Low_complexity 1 28 0 1029 127 0 0 chr17 33282056 33282198 -52156282 + FLAM_C SINE Alu 1 142 -1 325 294 0 0 chr17 33282199 33282284 -52156196 - MLT1I LTR MaLR -245 164 80 1270 235 97 81 chr17 33282294 33282694 -52155786 + HAL1 LINE L1 853 1245 -1262 2098 126 0 10 chr17 33282694 33282996 -52155484 - AluSx SINE Alu -13 299 1 1270 235 97 81 chr17 33282996 33283396 -52155084 + HAL1 LINE L1 1245 1666 -841 877 192 28 0 chr17 33283479 33283656 -52154824 + AluJo SINE Alu 121 302 -10 519 257 145 29 chr17 33283799 33284175 -52154305 + L1M4 LINE L1 2750 3159 -2987 360 0 0 0 chr17 33284426 33284466 -52154014 + (CA)n Simple_repeat Simple_repeat 2 41 0 380 222 0 0 chr17 33284475 33284547 -52153933 - MIR SINE MIR -32 230 159 1443 190 10 60 chr17 33284548 33284848 -52153632 - AluJo SINE Alu -22 290 6 619 253 25 70 chr17 33284858 33285016 -52153464 - MIR SINE MIR -111 151 1 287 282 18 27 chr17 33285213 33285323 -52153157 - L1MC4a LINE L1 -1884 5924 5816 2424 58 0 14 chr17 33285544 33285835 -52152645 - AluY SINE Alu -24 287 1 1340 113 10 39 chr17 33286235 33286438 -52152042 + AluSg/x SINE Alu 97 293 -19 27 0 0 0 chr17 33287393 33287420 -52151060 + AT_rich Low_complexity Low_complexity 1 27 0 382 241 52 9 chr17 33287738 33287854 -52150626 + MARNA DNA Mariner 269 389 -197 2105 133 13 0 chr17 33287860 33288168 -52150312 + AluSx SINE Alu 1 312 0 25 31 0 0 chr17 33288457 33288489 -52149991 + AT_rich Low_complexity Low_complexity 1 32 0 23 0 0 0 chr17 33288583 33288606 -52149874 + AT_rich Low_complexity Low_complexity 1 23 0 515 247 153 40 chr17 33288822 33289045 -52149435 + MIR SINE MIR 9 256 -6 333 0 0 0 chr17 33289873 33289910 -52148570 + (TG)n Simple_repeat Simple_repeat 2 38 0 204 125 0 0 chr17 33289910 33289942 -52148538 + (TA)n Simple_repeat Simple_repeat 2 33 0 1956 248 39 12 chr17 33290482 33290991 -52147489 + MER90 LTR ERV1 9 531 -44 318 302 50 96 chr17 33291013 33291314 -52147166 - HAL1b LINE L1 -854 494 208 339 25 0 0 chr17 33291635 33291675 -52146805 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 2249 90 0 0 chr17 33291681 33291959 -52146521 - AluSx SINE Alu -34 278 1 23 33 0 0 chr17 33292283 33292313 -52146167 + AT_rich Low_complexity Low_complexity 1 30 0 957 135 0 0 chr17 33292979 33293112 -52145368 - FLAM_C SINE Alu 0 133 1 2102 162 0 0 chr17 33293266 33293575 -52144905 + AluSx SINE Alu 1 309 -3 1698 188 0 30 chr17 33293603 33293906 -52144574 + AluJo SINE Alu 1 294 -18 2167 114 0 20 chr17 33293908 33294206 -52144274 + AluSx SINE Alu 1 292 -20 2385 81 0 0 chr17 33294800 33295097 -52143383 - AluY SINE Alu -14 297 1 258 106 0 0 chr17 33296284 33296331 -52142149 + (TAGA)n Simple_repeat Simple_repeat 4 50 0 2268 101 0 13 chr17 33298299 33298607 -52139873 + AluSq SINE Alu 1 304 -9 1279 189 3 106 chr17 33298953 33299275 -52139205 - AluSg1 SINE Alu -20 289 1 1544 198 3 35 chr17 33299305 33299593 -52138887 - AluJb SINE Alu -33 279 1 21 71 0 0 chr17 33299623 33299665 -52138815 + AT_rich Low_complexity Low_complexity 1 42 0 832 193 0 7 chr17 33300083 33300228 -52138252 + FRAM SINE Alu 2 145 -31 1358 116 0 0 chr17 33300276 33300448 -52138032 + AluSx SINE Alu 3 174 -138 363 109 0 0 chr17 33300454 33300509 -52137971 + AluSc SINE Alu 245 299 0 2363 74 10 7 chr17 33301131 33301427 -52137053 + AluSp SINE Alu 1 297 -16 260 306 148 9 chr17 33304248 33304356 -52134124 - MIR3 SINE MIR -2 206 84 1706 204 18 98 chr17 33304602 33305078 -52133402 + L1MC3 LINE L1 7315 7749 -36 2481 61 0 0 chr17 33305078 33305372 -52133108 - AluY SINE Alu -17 294 1 1706 204 18 98 chr17 33305372 33305405 -52133075 + L1MC3 LINE L1 7749 7783 -2 2248 99 0 0 chr17 33305405 33305687 -52132793 - AluSq SINE Alu -31 282 1 272 125 0 0 chr17 33305687 33305735 -52132745 + L1MD3 LINE L1 7947 7994 -1 227 200 0 31 chr17 33305842 33305907 -52132573 + GA-rich Low_complexity Low_complexity 4 66 0 1710 181 7 3 chr17 33305961 33306254 -52132226 + AluJb SINE Alu 1 294 -18 1890 162 27 74 chr17 33306267 33306712 -52131768 + L1MB7 LINE L1 5748 6171 -13 186 271 21 0 chr17 33306743 33306791 -52131689 - L2 LINE L2 -80 3192 3144 284 336 106 0 chr17 33306817 33306921 -52131559 + L2 LINE L2 3140 3254 -18 1352 163 117 4 chr17 33306995 33307291 -52131189 - AluJo SINE Alu 0 325 1 217 274 163 7 chr17 33308181 33308316 -52130164 + MIR SINE MIR 77 232 -30 588 139 150 139 chr17 33309029 33309070 -52129410 + MER53 DNA DNA 1 40 -149 2368 94 0 0 chr17 33309070 33309369 -52129111 + AluSg SINE Alu 1 299 -11 588 139 150 139 chr17 33309369 33309514 -52128966 + MER53 DNA DNA 40 189 0 1778 78 4 16 chr17 33310689 33310931 -52127549 + AluSq SINE Alu 1 239 -74 742 56 11 0 chr17 33310932 33311022 -52127458 + AluSg/x SINE Alu 201 291 -21 427 237 127 25 chr17 33311600 33311718 -52126762 - MIR SINE MIR -122 140 11 2237 87 10 3 chr17 33311752 33312041 -52126439 + AluSc SINE Alu 1 291 -18 403 310 80 103 chr17 33312044 33312590 -52125890 - L2 LINE L2 -93 3179 2641 579 246 54 6 chr17 33312706 33312873 -52125607 - HAL1 LINE L1 -758 1749 1575 6174 147 37 25 chr17 33312898 33314681 -52123799 + L1PB2 LINE L1 4357 6144 -7 416 121 0 30 chr17 33314691 33314757 -52123723 - HAL1 LINE L1 -917 1590 1527 583 276 107 5 chr17 33314830 33315026 -52123454 + L2 LINE L2 2865 3080 -233 22 0 0 0 chr17 33315044 33315066 -52123414 + AT_rich Low_complexity Low_complexity 1 22 0 829 141 47 8 chr17 33315086 33315214 -52123266 + FLAM_A SINE Alu 1 133 0 1139 260 55 33 chr17 33315296 33316020 -52122460 + L1ME LINE L1 4931 5681 -481 180 0 0 0 chr17 33316183 33316203 -52122277 + (TTTTA)n Simple_repeat Simple_repeat 1 20 0 6363 99 30 0 chr17 33316203 33317202 -52121278 - L1PA10 LINE L1 -21 6147 5123 * 13883 121 9 3 chr17 33317199 33319308 -52119172 + L1P LINE L1 2514 4636 -1510 11331 111 18 42 chr17 33319680 33320354 -52118126 - Tigger1 DNA MER2_type -637 1781 1092 2172 97 0 10 chr17 33320354 33320652 -52117828 + AluSg1 SINE Alu 15 309 0 11331 111 18 42 chr17 33320652 33321779 -52116701 - Tigger1 DNA MER2_type -1326 1092 24 276 330 97 0 chr17 33321817 33321920 -52116560 + L2 LINE L2 3144 3256 -16 186 133 17 50 chr17 33321978 33322038 -52116442 + T-rich Low_complexity Low_complexity 2 59 0 1181 173 0 0 chr17 33322311 33322502 -52115978 + AluJo SINE Alu 3 193 -119 367 126 46 92 chr17 33322528 33322543 -52115937 - MER5A DNA MER1_type -97 92 78 2366 105 0 0 chr17 33322543 33322849 -52115631 - AluSx SINE Alu -5 307 2 367 126 46 92 chr17 33322849 33322920 -52115560 - MER5A DNA MER1_type -111 78 10 299 209 171 19 chr17 33323284 33323389 -52115091 - L2 LINE L2 -2 3311 3191 589 280 0 13 chr17 33324159 33324316 -52114164 + MIR SINE MIR 108 262 0 197 369 77 31 chr17 33324335 33324465 -52114015 + L2 LINE L2 3121 3256 -16 1340 164 0 9 chr17 33324467 33324687 -52113793 - AluJo SINE Alu -8 304 87 410 216 52 35 chr17 33324829 33324945 -52113535 - MIR3 SINE MIR -14 194 77 289 303 197 11 chr17 33325089 33325277 -52113203 + MIR SINE MIR 13 235 -27 538 276 100 35 chr17 33325528 33325789 -52112691 + L2 LINE L2 3032 3309 -4 317 143 0 16 chr17 33327843 33327906 -52110574 + (TC)n Simple_repeat Simple_repeat 1 62 0 3628 113 64 9 chr17 33329337 33329869 -52108611 + L1PA16 LINE L1 5606 6166 0 789 167 7 43 chr17 33330005 33330143 -52108337 - FLAM_C SINE Alu 0 133 1 23 0 0 0 chr17 33330156 33330179 -52108301 + AT_rich Low_complexity Low_complexity 1 23 0 263 250 31 0 chr17 33330223 33330287 -52108193 - L2 LINE L2 0 3313 3248 389 326 14 21 chr17 33330879 33331023 -52107457 + MIR3 SINE MIR 49 191 -17 * 574 280 43 38 chr17 33330990 33331176 -52107304 + L2 LINE L2 2904 3090 -182 3792 147 15 16 chr17 33331224 33331829 -52106651 - Tigger1 DNA MER2_type 0 2418 1815 268 207 17 0 chr17 33332455 33332513 -52105967 + MER20 DNA MER1_type 161 219 0 254 283 35 35 chr17 33332950 33333063 -52105417 + L2 LINE L2 2251 2363 -951 1061 210 14 5 chr17 33333090 33333304 -52105176 + MER20 DNA MER1_type 4 219 0 907 270 128 16 chr17 33333327 33333890 -52104590 + L2 LINE L2 2708 3313 0 833 148 0 52 chr17 33334014 33334149 -52104331 - FLAM_A SINE Alu -5 128 1 2379 206 28 59 chr17 33334160 33334278 -52104202 - L1MB7 LINE L1 -11 6173 6053 2226 131 0 3 chr17 33334278 33334591 -52103889 - AluSx SINE Alu 0 312 1 2379 206 28 59 chr17 33334591 33334953 -52103527 - L1MB7 LINE L1 -131 6053 5723 2027 121 46 26 chr17 33334953 33335259 -52103221 + AluSx SINE Alu 1 312 0 2379 206 28 59 chr17 33335259 33335484 -52102996 - L1MB7 LINE L1 -461 5723 5493 415 204 46 28 chr17 33335591 33335699 -52102781 + MER5B DNA MER1_type 55 164 -14 208 245 0 0 chr17 33336975 33337024 -52101456 + MIR3 SINE MIR 140 188 -20 2524 67 0 0 chr17 33337040 33337340 -52101140 - AluY SINE Alu -11 300 1 1607 122 45 4 chr17 33337346 33337592 -52100888 - AluSx SINE Alu -23 289 34 316 229 35 27 chr17 33337781 33337932 -52100548 + MIR3 SINE MIR 11 160 -62 2385 75 0 3 chr17 33338002 33338295 -52100185 - AluY SINE Alu -14 297 6 645 190 16 0 chr17 33338330 33338451 -52100029 + AluSg/x SINE Alu 187 309 -1 384 97 0 0 chr17 33338451 33338513 -52099967 + (GGAA)n Simple_repeat Simple_repeat 1 62 0 609 222 96 0 chr17 33338516 33338651 -52099829 - LTR16C LTR ERVL -51 440 293 204 241 130 28 chr17 33339080 33339188 -52099292 + MIR SINE MIR 128 246 -16 864 115 0 0 chr17 33339907 33340029 -52098451 - L1MB1 LINE L1 -296 5893 5772 304 240 171 0 chr17 33340029 33340158 -52098322 + L1ME4a LINE L1 5754 5904 -217 188 259 86 12 chr17 33340375 33340456 -52098024 - MIR SINE MIR -79 129 43 265 289 134 7 chr17 33340797 33340939 -52097541 - MIR SINE MIR -56 206 47 217 310 163 8 chr17 33341384 33341513 -52096967 - MIR3 SINE MIR -17 191 43 978 102 5 133 chr17 33342375 33342571 -52095909 + AluJb SINE Alu 1 171 -141 705 191 67 52 chr17 33342603 33342797 -52095683 + AluJb SINE Alu 97 293 -19 434 250 83 8 chr17 33342866 33342998 -52095482 - MIR SINE MIR -75 187 46 317 269 245 18 chr17 33343145 33343431 -52095049 - L2 LINE L2 -159 3154 2804 1388 158 90 43 chr17 33343435 33343713 -52094767 - AluJo SINE Alu -16 296 6 239 216 0 0 chr17 33343720 33343771 -52094709 - L2 LINE L2 -515 2799 2749 1294 126 0 0 chr17 33344444 33344626 -52093854 + AluSg/x SINE Alu 128 309 -1 3477 140 29 8 chr17 33344774 33345457 -52093023 + L1MA4A LINE L1 5163 5857 -446 307 106 0 0 chr17 33345574 33345621 -52092859 + Alu SINE Alu 251 297 -4 694 157 0 0 chr17 33346486 33346594 -52091886 + Tigger2a DNA MER2_type 1 108 -326 1585 104 14 0 chr17 33346694 33346905 -52091575 + AluSg/x SINE Alu 90 303 -9 579 286 94 5 chr17 33347334 33347547 -52090933 + MIR SINE MIR 13 244 -18 925 206 0 0 chr17 33347698 33347863 -52090617 + FRAM SINE Alu 1 161 -15 1633 186 0 0 chr17 33347918 33348208 -52090272 - AluSq SINE Alu -23 290 1 606 221 0 26 chr17 33348313 33348498 -52089982 + AluY SINE Alu 132 312 0 1862 170 3 0 chr17 33348540 33348823 -52089657 + AluJo SINE Alu 3 286 -26 374 196 21 7 chr17 33348823 33348966 -52089514 + (TA)n Simple_repeat Simple_repeat 1 145 0 312 262 19 58 chr17 33348967 33349070 -52089410 + L2 LINE L2 3174 3272 0 188 321 45 90 chr17 33349086 33349220 -52089260 + L2 LINE L2 2924 3051 -221 294 122 0 0 chr17 33349677 33349718 -52088762 - Alu SINE Alu -260 41 1 253 272 33 22 chr17 33349720 33349812 -52088668 - L1MC/D LINE L1 -2145 5663 5571 1525 171 4 11 chr17 33349820 33350083 -52088397 - AluJb SINE Alu -18 294 34 2289 80 0 7 chr17 33350208 33350518 -52087962 + AluY SINE Alu 1 308 0 2234 103 7 3 chr17 33350583 33350883 -52087597 + AluSq SINE Alu 1 301 -12 2259 89 0 3 chr17 33351288 33351579 -52086901 + AluSg SINE Alu 6 295 -15 421 277 66 15 chr17 33351587 33351724 -52086756 + MIR SINE MIR 48 191 -71 1527 144 134 25 chr17 33351761 33352038 -52086442 - AluJb SINE Alu -5 307 1 455 267 95 70 chr17 33352039 33352166 -52086314 - L1ME4a LINE L1 -276 5845 5723 1936 111 52 0 chr17 33352166 33352480 -52086000 - AluSq SINE Alu 0 328 1 455 267 95 70 chr17 33352480 33352501 -52085979 - L1ME4a LINE L1 -398 5723 5704 2289 109 3 0 chr17 33352501 33352803 -52085677 - AluSp SINE Alu -10 303 1 455 267 95 70 chr17 33352803 33352937 -52085543 - L1ME4a LINE L1 -417 5704 5554 584 159 0 0 chr17 33352984 33353072 -52085408 + AluJ/FLAM SINE Alu 2 89 -223 1990 141 3 3 chr17 33353305 33353630 -52084850 - AluSx SINE Alu 0 312 1 233 292 142 26 chr17 33353946 33354059 -52084421 + MIR SINE MIR 32 157 -105 30 77 0 0 chr17 33354059 33354124 -52084356 + AT_rich Low_complexity Low_complexity 1 65 0 186 43 0 0 chr17 33357633 33357656 -52080824 + (TC)n Simple_repeat Simple_repeat 2 24 0 210 109 22 22 chr17 33358554 33358600 -52079880 + A-rich Low_complexity Low_complexity 1 46 0 281 240 27 13 chr17 33359513 33359588 -52078892 + MLT1K LTR MaLR 509 584 -4 194 91 30 0 chr17 33360302 33360335 -52078145 + (CA)n Simple_repeat Simple_repeat 2 35 0 256 266 127 0 chr17 33360381 33360460 -52078020 - MIR SINE MIR -115 147 59 2080 135 3 16 chr17 33361312 33361624 -52076856 - AluJb SINE Alu -4 308 1 2125 136 3 13 chr17 33361891 33362201 -52076279 - AluSx SINE Alu -4 308 2 572 219 67 49 chr17 33362919 33363031 -52075449 + MER5B DNA MER1_type 1 118 -60 2220 110 7 3 chr17 33363031 33363340 -52075140 - AluSq SINE Alu -3 310 1 572 219 67 49 chr17 33363340 33363391 -52075089 + MER5B DNA MER1_type 118 167 -11 1756 131 45 24 chr17 33363875 33364165 -52074315 - AluJb SINE Alu -16 296 1 589 284 12 12 chr17 33364859 33365028 -52073452 - MIR SINE MIR -60 202 34 745 211 105 14 chr17 33365308 33365517 -52072963 + L1MC4a LINE L1 5735 5962 -1846 308 176 147 29 chr17 33365588 33365690 -52072790 + L1MC4a LINE L1 6055 6168 -1640 2003 133 0 23 chr17 33365877 33366015 -52072465 + AluSq SINE Alu 1 141 -172 2246 115 0 3 chr17 33366015 33366327 -52072153 + AluY SINE Alu 1 311 0 2003 133 0 23 chr17 33366327 33366490 -52071990 + AluSq SINE Alu 141 295 -18 2333 86 3 0 chr17 33366498 33366789 -52071691 + AluSx SINE Alu 6 297 -15 421 277 66 15 chr17 33366797 33366934 -52071546 + MIR SINE MIR 48 191 -71 1002 168 0 38 chr17 33366971 33367156 -52071324 - AluJb SINE Alu -5 307 130 3519 56 9 21 chr17 33367273 33367760 -52070720 + L1PA8A LINE L1 5667 6147 0 181 0 0 0 chr17 33367740 33367780 -52070700 + (CAA)n Simple_repeat Simple_repeat 2 41 0 289 295 133 0 chr17 33368019 33368124 -52070356 + MER5B DNA MER1_type 59 177 -1 1891 127 0 0 chr17 33370322 33370581 -52067899 - AluSx SINE Alu -5 307 49 617 254 44 16 chr17 33370581 33370785 -52067695 + MER51A LTR ERV1 1 336 -304 2139 124 3 0 chr17 33370949 33371247 -52067233 - AluSq SINE Alu -14 299 1 837 204 115 5 chr17 33371271 33371462 -52067018 + MER51C LTR ERV1 429 640 0 239 146 125 0 chr17 33371462 33371508 -52066972 - AluSx SINE Alu -251 52 1 2111 106 10 10 chr17 33371598 33371917 -52066563 + AluSc SINE Alu 1 309 0 187 342 70 26 chr17 33372256 33372370 -52066110 + L2 LINE L2 3122 3240 -32 2096 89 38 3 chr17 33373687 33373978 -52064502 + AluSc SINE Alu 3 303 -6 1472 198 0 14 chr17 33374053 33374331 -52064149 + AluJb SINE Alu 1 274 -38 1809 114 0 0 chr17 33374437 33374673 -52063807 - AluSq SINE Alu -76 237 2 27 49 0 0 chr17 33374683 33374724 -52063756 + AT_rich Low_complexity Low_complexity 1 41 0 2082 105 10 16 chr17 33374751 33375064 -52063416 - AluSx SINE Alu -1 311 1 1727 166 46 36 chr17 33375358 33375665 -52062815 - AluJb SINE Alu -2 310 1 187 325 152 26 chr17 33376079 33376131 -52062349 - L2 LINE L2 -5 3267 3223 2198 96 16 35 chr17 33376131 33376444 -52062036 + AluSq SINE Alu 1 307 -6 187 325 152 26 chr17 33376444 33376542 -52061938 - L2 LINE L2 -49 3223 3098 343 353 138 20 chr17 33376749 33377336 -52061144 - L2 LINE L2 -450 2864 2209 293 311 19 39 chr17 33377517 33377620 -52060860 + L2 LINE L2 3201 3301 -12 204 40 0 0 chr17 33377620 33377645 -52060835 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 2318 81 7 3 chr17 33377886 33378181 -52060299 + AluSp SINE Alu 2 297 -16 1540 186 53 21 chr17 33378404 33378689 -52059791 - AluJb SINE Alu -18 294 1 189 0 0 0 chr17 33379463 33379484 -52058996 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 2131 110 40 0 chr17 33379831 33380132 -52058348 + AluSq SINE Alu 1 313 0 2374 77 3 10 chr17 33381133 33381431 -52057049 - AluSc SINE Alu -13 296 1 22 35 0 0 chr17 33381475 33381504 -52056976 + AT_rich Low_complexity Low_complexity 1 29 0 1881 115 63 0 chr17 33381769 33382039 -52056441 - AluSx SINE Alu 0 312 26 652 112 10 0 chr17 33382656 33382783 -52055697 + AluSg/x SINE Alu 182 309 0 411 179 105 0 chr17 33382880 33382975 -52055505 + L1MC5 LINE L1 7004 7108 -853 * 2260 180 81 57 chr17 33382956 33383618 -52054862 + L1MD3 LINE L1 7359 8002 -10 2209 128 0 3 chr17 33383809 33384115 -52054365 + AluSx SINE Alu 1 305 -7 1739 191 10 3 chr17 33384215 33384514 -52053966 + AluJo SINE Alu 1 301 -11 32 26 0 0 chr17 33384588 33384627 -52053853 + AT_rich Low_complexity Low_complexity 1 39 0 1645 163 64 11 chr17 33384713 33384996 -52053484 + AluJb SINE Alu 1 298 -14 560 141 0 0 chr17 33384906 33384998 -52053482 + AluJb SINE Alu 209 300 -12 2424 157 83 9 chr17 33385217 33385559 -52052921 + L1M4 LINE L1 5088 5403 -775 2073 119 7 7 chr17 33385559 33385852 -52052628 + AluSx SINE Alu 1 293 -19 2279 97 7 3 chr17 33385855 33386153 -52052327 + AluSg SINE Alu 1 299 -11 2424 157 83 9 chr17 33386153 33386443 -52052037 + L1M4 LINE L1 5404 5770 -408 509 82 0 14 chr17 33386445 33386518 -52051962 + L1MB8 LINE L1 6101 6172 -6 336 301 95 16 chr17 33386754 33386965 -52051515 - MIR SINE MIR -39 223 1 2341 96 3 7 chr17 33386990 33387293 -52051187 - AluSx SINE Alu -10 302 1 2246 113 3 0 chr17 33387690 33387982 -52050498 - AluSx SINE Alu -19 293 1 246 86 0 0 chr17 33388336 33388371 -52050109 - Alu SINE Alu -267 35 1 817 128 0 0 chr17 33388373 33388498 -52049982 + AluSp/q SINE Alu 185 309 -4 780 152 15 15 chr17 33388502 33388634 -52049846 + FLAM_C SINE Alu 2 133 0 23 0 0 0 chr17 33388919 33388942 -52049538 + AT_rich Low_complexity Low_complexity 1 23 0 455 241 185 10 chr17 33391380 33391575 -52046905 - MIR SINE MIR -20 242 14 291 286 161 10 chr17 33391981 33392180 -52046300 - MIR SINE MIR 0 262 34 2346 82 17 3 chr17 33392511 33392805 -52045675 - AluSx SINE Alu -14 298 1 2082 125 0 19 chr17 33393745 33394058 -52044422 - AluSq SINE Alu -6 307 1 673 84 0 0 chr17 33394060 33394155 -52044325 - AluSp/q SINE Alu -4 309 215 1156 228 21 4 chr17 33394260 33394497 -52043983 - MLT1F LTR MaLR -291 251 11 321 288 63 78 chr17 33395707 33395862 -52042618 - L1ME LINE L1 -462 5659 5503 1661 137 49 53 chr17 33395862 33396172 -52042308 - AluJo SINE Alu 0 311 3 321 288 63 78 chr17 33396172 33396347 -52042133 - L1ME LINE L1 -618 5503 5332 294 240 240 10 chr17 33396580 33396684 -52041796 + L2 LINE L2 3181 3308 -5 2243 84 16 42 chr17 33397915 33398223 -52040257 - AluSx SINE Alu -11 301 2 262 222 0 0 chr17 33398935 33398989 -52039491 - L3 LINE CR1 -3 1574 1521 1458 174 71 0 chr17 33398989 33399271 -52039209 - AluJb SINE Alu -10 302 1 1554 103 4 39 chr17 33399941 33400165 -52038315 + AluJo SINE Alu 86 303 -9 324 0 0 0 chr17 33400165 33400201 -52038279 + (TA)n Simple_repeat Simple_repeat 2 37 0 193 204 23 0 chr17 33400230 33400274 -52038206 + MIR SINE MIR 74 118 -144 5474 199 102 38 chr17 33400319 33401021 -52037459 + L1M2a LINE L1 1259 1915 -5252 1966 162 0 13 chr17 33401021 33401336 -52037144 - AluJo SINE Alu -1 311 1 5474 199 102 38 chr17 33401336 33401611 -52036869 + L1M2a LINE L1 1915 2171 -4996 2066 154 0 0 chr17 33401611 33401917 -52036563 + AluSx SINE Alu 4 309 -3 5474 199 102 38 chr17 33401917 33403211 -52035269 + L1M2a LINE L1 2171 3754 -3413 2268 104 7 3 chr17 33404044 33404353 -52034127 + AluY SINE Alu 1 310 -1 22 56 0 0 chr17 33404497 33404533 -52033947 + AT_rich Low_complexity Low_complexity 1 36 0 2379 84 7 0 chr17 33404691 33404989 -52033491 + AluSp SINE Alu 1 300 -13 2558 56 0 7 chr17 33405284 33405588 -52032892 + AluY SINE Alu 1 302 -9 2235 115 0 0 chr17 33406248 33406553 -52031927 - AluSg SINE Alu 0 310 6 1852 137 13 47 chr17 33407908 33408208 -52030272 + AluSx SINE Alu 1 290 -22 256 233 0 0 chr17 33408221 33408281 -52030199 + AluJo SINE Alu 83 142 -160 2280 104 3 3 chr17 33408283 33408581 -52029899 + AluSc SINE Alu 1 298 -11 1693 189 4 0 chr17 33408595 33408876 -52029604 + AluJo SINE Alu 1 282 -30 261 0 0 0 chr17 33408879 33408908 -52029572 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 591 297 40 31 chr17 33408913 33408993 -52029487 + HAL1 LINE L1 1661 1739 -768 2108 125 3 23 chr17 33408993 33409297 -52029183 + AluSg SINE Alu 1 298 -12 591 297 40 31 chr17 33409297 33409438 -52029042 + HAL1 LINE L1 1739 1884 -623 2125 140 7 0 chr17 33409514 33409822 -52028658 - AluSx SINE Alu -2 310 1 210 37 0 0 chr17 33410368 33410395 -52028085 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2319 79 7 3 chr17 33411374 33411678 -52026802 + AluSq SINE Alu 1 305 -8 219 288 0 14 chr17 33412305 33412378 -52026102 + L2 LINE L2 3200 3271 -1 4459 99 26 2 chr17 33413717 33414342 -52024138 - MER51C LTR ERV1 0 640 1 398 112 26 0 chr17 33414342 33414418 -52024062 - MER51A LTR ERV1 -579 61 1 591 184 44 0 chr17 33414880 33414994 -52023486 - FLAM_A SINE Alu -11 131 13 345 169 51 0 chr17 33415258 33415317 -52023163 + AluJ/FLAM SINE Alu 1 62 -240 555 153 0 0 chr17 33415323 33415408 -52023072 - AluS SINE Alu -226 86 2 2202 110 0 16 chr17 33415717 33416025 -52022455 + AluSg SINE Alu 1 303 -7 1426 156 51 36 chr17 33416225 33416500 -52021980 - AluJo SINE Alu -33 279 1 3324 155 53 10 chr17 33416521 33417120 -52021360 - L1MB2 LINE L1 -7 6164 5540 1515 144 30 15 chr17 33417167 33417437 -52021043 + L1MA5 LINE L1 6027 6300 0 252 293 231 0 chr17 33417450 33417655 -52020825 - L1M4 LINE L1 -2108 4038 3882 4670 124 38 30 chr17 33417655 33418157 -52020323 - L1MA4 LINE L1 0 6300 5787 2054 143 7 0 chr17 33418157 33418465 -52020015 - AluJb SINE Alu -2 310 1 4670 124 38 30 chr17 33418465 33418795 -52019685 - L1MA4 LINE L1 -513 5787 5461 252 293 231 0 chr17 33418795 33418896 -52019584 - L1M4 LINE L1 -2264 3882 3661 2233 75 57 0 chr17 33419838 33420119 -52018361 + AluSx SINE Alu 1 297 -15 791 177 13 6 chr17 33420770 33420928 -52017552 - Charlie4 DNA MER1_type 0 1961 1803 891 206 65 32 chr17 33420952 33421199 -52017281 - Charlie4 DNA MER1_type -1705 256 2 1876 167 91 60 chr17 33421362 33421846 -52016634 + MLT1D LTR MaLR 5 503 -2 246 240 0 0 chr17 33422780 33422830 -52015650 + Alu SINE Alu 118 167 -141 1923 100 10 93 chr17 33423037 33423381 -52015099 - AluSx SINE Alu 0 319 2 731 255 222 5 chr17 33423381 33423769 -52014711 + L1ME4a LINE L1 5467 5938 -183 1877 143 10 27 chr17 33423947 33424248 -52014232 - AluJo SINE Alu -16 296 1 796 83 9 0 chr17 33425006 33425115 -52013365 - HY1 scRNA scRNA -1 111 2 654 293 71 4 chr17 33426565 33426790 -52011690 + MER112 DNA MER1_type 21 260 0 467 119 0 0 chr17 33426794 33426861 -52011619 - MER20 DNA MER1_type -4 215 149 * 1199 162 33 14 chr17 33426859 33427069 -52011411 + MER20 DNA MER1_type 6 219 0 2070 152 0 3 chr17 33427084 33427387 -52011093 + AluSx SINE Alu 1 302 -10 183 80 0 0 chr17 33427387 33427412 -52011068 + (GA)n Simple_repeat Simple_repeat 1 25 0 469 132 0 44 chr17 33428408 33428499 -52009981 + AluJ/FLAM SINE Alu 2 88 -224 829 120 8 16 chr17 33428600 33428725 -52009755 + FLAM_C SINE Alu 11 134 -9 1365 134 4 69 chr17 33429294 33429525 -52008955 - AluJb SINE Alu -12 300 85 330 151 0 0 chr17 33429731 33429784 -52008696 + Alu SINE Alu 243 295 -6 1676 181 19 29 chr17 33431086 33431400 -52007080 - AluJo SINE Alu -1 311 1 2067 127 21 0 chr17 33431426 33431717 -52006763 + AluSx SINE Alu 1 297 -15 1614 123 0 13 chr17 33432245 33432473 -52006007 - AluJb SINE Alu -7 305 81 593 222 4 126 chr17 33432509 33432748 -52005732 + AluJb SINE Alu 2 211 -101 246 278 28 0 chr17 33433760 33433832 -52004648 + MER116 DNA Mariner 1 74 -6 439 211 32 87 chr17 33434489 33434594 -52003886 + MER5A DNA MER1_type 14 106 -83 2686 27 0 0 chr17 33434594 33434891 -52003589 + AluY SINE Alu 1 297 -14 439 211 32 87 chr17 33434891 33434970 -52003510 + MER5A DNA MER1_type 106 188 -1 1715 151 35 21 chr17 33435225 33435509 -52002971 + AluJb SINE Alu 1 288 -24 1902 131 50 10 chr17 33436093 33436393 -52002087 + AluJb SINE Alu 1 309 -3 395 285 173 32 chr17 33436411 33436759 -52001721 - L2 LINE L2 -239 3033 2635 193 240 62 62 chr17 33437575 33437605 -52000875 - MIR SINE MIR -43 219 190 2226 88 7 0 chr17 33437605 33437899 -52000581 - AluSx SINE Alu -16 296 1 193 240 62 62 chr17 33437899 33437964 -52000516 - MIR SINE MIR -71 191 124 23 101 0 0 chr17 33438525 33438604 -51999876 + GC_rich Low_complexity Low_complexity 1 79 0 794 170 75 6 chr17 33439956 33440115 -51998365 + MER45A DNA AcHobo 9 178 0 5918 198 42 66 chr17 33440940 33441504 -51996976 + L1MA4 LINE L1 2860 3436 -2710 1797 191 116 16 chr17 33441504 33441892 -51996588 + MSTA LTR MaLR 1 427 -1 5918 198 42 66 chr17 33441892 33442316 -51996164 + L1MA4 LINE L1 3436 3869 -2277 2079 88 0 11 chr17 33442316 33442632 -51995848 + AluSc SINE Alu 1 313 0 5918 198 42 66 chr17 33442632 33443003 -51995477 + L1MA4 LINE L1 3869 4248 -1898 959 132 0 0 chr17 33443003 33443147 -51995333 + AluJb SINE Alu 154 297 -15 2349 87 0 0 chr17 33443149 33443459 -51995021 + AluSx SINE Alu 1 310 -2 5918 198 42 66 chr17 33443459 33443863 -51994617 + L1MA4 LINE L1 4249 4661 -1485 1090 170 277 0 chr17 33443863 33444098 -51994382 + AluJb SINE Alu 1 300 -2 5918 198 42 66 chr17 33444098 33444738 -51993742 + L1MA4 LINE L1 4661 5355 -791 914 138 12 12 chr17 33444735 33444902 -51993578 + L1MA4 LINE L1 5662 5828 -472 * 854 74 25 8 chr17 33444902 33445024 -51993456 + BC200 scRNA scRNA 17 140 -60 2753 115 50 9 chr17 33445037 33445499 -51992981 + L1MA4 LINE L1 5814 6294 -6 1536 193 0 13 chr17 33445602 33445902 -51992578 + AluJo SINE Alu 1 296 -16 238 258 65 129 chr17 33447699 33447823 -51990657 - L2 LINE L2 -15 3257 3142 21 0 0 0 chr17 33447943 33447964 -51990516 + AT_rich Low_complexity Low_complexity 1 21 0 954 96 0 15 chr17 33447964 33448100 -51990380 + AluY SINE Alu 1 134 -177 2084 68 7 11 chr17 33448100 33448381 -51990099 + AluY SINE Alu 1 280 -31 32 0 0 0 chr17 33448381 33448413 -51990067 + AT_rich Low_complexity Low_complexity 1 32 0 232 335 112 26 chr17 33448413 33448565 -51989915 + L3 LINE CR1 1350 1514 -63 216 0 0 0 chr17 33449636 33449660 -51988820 + (TA)n Simple_repeat Simple_repeat 2 25 0 2365 63 0 3 chr17 33449713 33450014 -51988466 + AluY SINE Alu 1 300 -11 852 270 71 15 chr17 33450097 33450434 -51988046 - L1ME LINE L1 -376 5786 5431 2243 95 0 7 chr17 33450669 33450973 -51987507 + AluSx SINE Alu 1 302 -10 1112 140 0 0 chr17 33450979 33451143 -51987337 + FRAM SINE Alu 1 156 -20 636 163 52 7 chr17 33451294 33451429 -51987051 + Charlie4 DNA MER1_type 1821 1961 0 2122 89 0 0 chr17 33452035 33452366 -51986114 - AluSc SINE Alu 0 331 1 369 228 121 54 chr17 33453714 33453863 -51984617 + L1ME1 LINE L1 5708 5866 -300 24 0 0 0 chr17 33454012 33454036 -51984444 + AT_rich Low_complexity Low_complexity 1 24 0 1171 179 15 5 chr17 33454249 33454450 -51984030 - MER20 DNA MER1_type -16 203 1 2215 97 0 0 chr17 33454453 33454753 -51983727 + AluSq SINE Alu 1 300 -13 470 208 180 55 chr17 33456326 33456491 -51981989 + MER58C DNA MER1_type 2 194 -2226 1782 96 0 4 chr17 33456491 33456741 -51981739 + AluSg1 SINE Alu 1 249 -60 470 208 180 55 chr17 33456741 33456758 -51981722 + MER58C DNA MER1_type 194 207 -8 2120 96 0 17 chr17 33458940 33459233 -51979247 + AluSq SINE Alu 5 292 -21 353 322 92 99 chr17 33459550 33459823 -51978657 + L2 LINE L2 2989 3259 -13 531 110 0 0 chr17 33460521 33460594 -51977886 + AluS SINE Alu 2 74 -239 2525 62 0 0 chr17 33460597 33460906 -51977574 - AluY SINE Alu -2 309 1 883 166 0 75 chr17 33461424 33461482 -51976998 - AluJo SINE Alu -139 173 112 2184 94 3 0 chr17 33461482 33461779 -51976701 + AluSq SINE Alu 1 298 -15 883 166 0 75 chr17 33461779 33461907 -51976573 - AluJo SINE Alu -200 112 1 22 35 0 0 chr17 33463135 33463164 -51975316 + GC_rich Low_complexity Low_complexity 1 29 0 1504 152 97 0 chr17 33464516 33464785 -51973695 + AluJb SINE Alu 1 295 -17 1970 123 3 3 chr17 33465226 33465519 -51972961 - AluSx SINE Alu -19 293 1 32 0 0 0 chr17 33465519 33465551 -51972929 + AT_rich Low_complexity Low_complexity 1 32 0 23 0 0 0 chr17 33466284 33466307 -51972173 + AT_rich Low_complexity Low_complexity 1 23 0 233 169 17 0 chr17 33466570 33466629 -51971851 + (CA)n Simple_repeat Simple_repeat 2 61 0 207 167 0 37 chr17 33467354 33467408 -51971072 + A-rich Low_complexity Low_complexity 2 53 0 2220 100 0 0 chr17 33469272 33469571 -51968909 - AluSx SINE Alu -13 299 1 2127 102 30 0 chr17 33473650 33473953 -51964527 - AluSx SINE Alu 0 312 1 219 219 0 0 chr17 33476338 33476379 -51962101 + GA-rich Low_complexity Low_complexity 2 42 0 761 222 42 0 chr17 33478039 33478206 -51960274 + MER5B DNA MER1_type 1 174 -4 2280 99 0 0 chr17 33478517 33478819 -51959661 - AluSc SINE Alu -7 302 1 368 194 16 0 chr17 33478840 33478902 -51959578 - AluJb SINE Alu -19 283 221 455 219 0 0 chr17 33478902 33478984 -51959496 - AluJb SINE Alu -124 188 107 618 163 0 0 chr17 33479084 33479176 -51959304 - AluJ/FLAM SINE Alu -220 92 1 868 186 12 12 chr17 33479225 33479392 -51959088 + AluJb SINE Alu 137 303 -9 349 262 255 0 chr17 33480772 33480921 -51957559 - MIR SINE MIR -1 261 75 644 267 78 11 chr17 33481752 33481943 -51956537 + MIR SINE MIR 47 250 -12 2069 116 0 28 chr17 33482179 33482498 -51955982 - AluSx SINE Alu -2 310 1 645 287 17 21 chr17 33482736 33482973 -51955507 + L1MC4 LINE L1 7807 8042 0 194 324 27 27 chr17 33483617 33483691 -51954789 + MIR SINE MIR 16 89 -119 438 216 153 60 chr17 33486712 33486980 -51951500 - L1ME4a LINE L1 -81 6040 5748 4780 188 112 64 chr17 33487025 33488242 -51950238 - L1MC4 LINE L1 -5 8037 6880 2153 121 0 3 chr17 33488242 33488531 -51949949 - AluSq SINE Alu -25 288 1 4780 188 112 64 chr17 33488531 33488630 -51949850 - L1MC4 LINE L1 -1162 6880 6787 523 26 40 0 chr17 33488630 33488706 -51949774 + (TAGA)n Simple_repeat Simple_repeat 3 81 0 4780 188 112 64 chr17 33488706 33488850 -51949630 - L1MC4 LINE L1 -1255 6787 6506 1718 157 50 11 chr17 33489703 33489984 -51948496 + AluJo SINE Alu 1 292 -20 570 262 113 4 chr17 33491489 33491718 -51946762 + L1ME4a LINE L1 5690 5943 -178 299 224 51 31 chr17 33492134 33492232 -51946248 - Charlie8 DNA MER1_type -2185 232 133 2336 91 7 0 chr17 33492999 33493308 -51945172 - AluSp SINE Alu -2 311 1 2293 129 0 0 chr17 33493953 33494264 -51944216 + AluSx SINE Alu 1 311 -1 234 304 98 0 chr17 33494277 33494369 -51944111 - L1ME4a LINE L1 -543 5578 5478 405 0 0 0 chr17 33494670 33494715 -51943765 + (TG)n Simple_repeat Simple_repeat 2 46 0 319 157 0 0 chr17 33495365 33495416 -51943064 - MER66A LTR ERV1 -141 337 287 1990 138 3 16 chr17 33495512 33495816 -51942664 - AluJb SINE Alu -12 300 1 2434 82 13 0 chr17 33496379 33496685 -51941795 + AluSp SINE Alu 1 310 -3 2057 96 0 4 chr17 33496825 33497086 -51941394 + AluSx SINE Alu 1 260 -52 216 0 0 0 chr17 33497087 33497111 -51941369 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 21 0 0 0 chr17 33497375 33497396 -51941084 + AT_rich Low_complexity Low_complexity 1 21 0 1973 117 72 14 chr17 33498990 33499125 -51939355 + AluSx SINE Alu 1 127 -185 2485 77 0 0 chr17 33499125 33499423 -51939057 + AluSg SINE Alu 1 298 -12 1973 117 72 14 chr17 33499423 33499578 -51938902 + AluSx SINE Alu 127 308 -4 847 107 54 0 chr17 33500259 33500371 -51938109 - FLAM_C SINE Alu -25 118 1 678 197 0 0 chr17 33501191 33501313 -51937167 + FLAM_A SINE Alu 15 136 -6 1473 208 13 23 chr17 33501493 33501796 -51936684 - AluJo SINE Alu -12 300 1 1866 161 3 10 chr17 33501839 33502150 -51936330 - AluJb SINE Alu -3 309 1 326 303 13 40 chr17 33503131 33503283 -51935197 + MIR3 SINE MIR 47 194 -14 1989 123 127 51 chr17 33503696 33504110 -51934370 + MSTB1 LTR MaLR 1 429 -3 458 316 74 0 chr17 33504574 33504769 -51933711 - MIR SINE MIR -26 236 28 431 229 186 0 chr17 33505017 33505157 -51933323 - MIR SINE MIR -32 230 65 1442 218 31 3 chr17 33505393 33505682 -51932798 + AluJo SINE Alu 1 297 -15 2373 103 0 0 chr17 33505685 33505987 -51932493 + AluSx SINE Alu 2 303 -9 22 35 0 0 chr17 33506012 33506041 -51932439 + AT_rich Low_complexity Low_complexity 1 29 0 242 222 32 16 chr17 33507549 33507612 -51930868 - MIR SINE MIR -85 123 60 1426 122 109 0 chr17 33507636 33507857 -51930623 - AluSx SINE Alu -25 287 43 2321 99 7 0 chr17 33509232 33509525 -51928955 + AluSg SINE Alu 2 296 -14 1492 179 21 25 chr17 33509659 33509944 -51928536 - AluJb SINE Alu -28 284 1 1869 151 21 7 chr17 33510091 33510382 -51928098 - AluSx SINE Alu -17 295 1 2367 90 0 0 chr17 33510546 33510847 -51927633 - AluSx SINE Alu -11 301 1 1626 180 4 4 chr17 33511158 33511430 -51927050 - AluJb SINE Alu -19 293 22 2340 120 0 0 chr17 33511455 33511764 -51926716 - AluSc SINE Alu 0 309 1 2157 138 0 0 chr17 33511789 33512087 -51926393 - AluSx SINE Alu -14 298 1 1380 119 14 162 chr17 33512194 33512546 -51925934 - AluSp SINE Alu -13 300 1 443 273 96 38 chr17 33512623 33512832 -51925648 + MLT1J LTR MaLR 289 509 -2 219 266 33 14 chr17 33513303 33513407 -51925073 + MIR SINE MIR 46 151 -57 1682 71 0 0 chr17 33513409 33513619 -51924861 + L1PA8A LINE L1 5433 5642 -489 28 0 0 0 chr17 33564188 33564216 -51874264 + AT_rich Low_complexity Low_complexity 1 28 0 2360 100 0 3 chr17 33564216 33564527 -51873953 - AluSq SINE Alu -3 310 1 2021 137 0 16 chr17 33564762 33565076 -51873404 - AluSx SINE Alu -3 309 1 2282 108 0 0 chr17 33565268 33565564 -51872916 + AluSq SINE Alu 1 296 -17 291 167 0 21 chr17 33565668 33565716 -51872764 + MER4E LTR ERV1 648 694 -72 33 0 0 0 chr17 33565721 33565754 -51872726 + AT_rich Low_complexity Low_complexity 1 33 0 21 0 0 0 chr17 33565863 33565884 -51872596 + AT_rich Low_complexity Low_complexity 1 21 0 1919 153 0 3 chr17 33570805 33571099 -51867381 + AluJb SINE Alu 3 295 -17 2293 88 17 3 chr17 33571544 33571839 -51866641 - AluSp SINE Alu -11 302 4 2264 109 0 22 chr17 33571839 33572159 -51866321 - AluSq SINE Alu 0 313 1 2354 87 0 3 chr17 33572932 33573231 -51865249 + AluSx SINE Alu 1 298 -14 1096 134 0 0 chr17 33575293 33575450 -51863030 - AluSc SINE Alu -23 286 130 2205 98 3 42 chr17 33575463 33575770 -51862710 - AluSp SINE Alu -18 295 1 2369 93 0 7 chr17 33576080 33576390 -51862090 + AluSq SINE Alu 1 308 -5 413 290 62 40 chr17 33577058 33577234 -51861246 - MIR SINE MIR -36 226 47 911 255 79 67 chr17 33579080 33579409 -51859071 + MER102b DNA MER1_type 1 333 -8 2208 124 3 0 chr17 33579761 33580067 -51858413 + AluSx SINE Alu 1 307 -5 1916 149 37 0 chr17 33581024 33581320 -51857160 + AluJb SINE Alu 1 307 -5 2183 90 4 4 chr17 33581801 33582116 -51856364 + AluSg SINE Alu 1 315 0 856 251 27 82 chr17 33582793 33583041 -51855439 + L2 LINE L2 2933 3153 -160 1793 164 0 7 chr17 33583041 33583349 -51855131 - AluJb SINE Alu 0 306 1 856 251 27 82 chr17 33583349 33583501 -51854979 + L2 LINE L2 3153 3312 -1 1122 219 62 0 chr17 33584163 33584405 -51854075 - MIR SINE MIR -2 260 4 942 134 0 7 chr17 33586169 33586311 -51852169 + AluJb SINE Alu 1 141 -171 2241 109 3 28 chr17 33586452 33586772 -51851708 + AluSx SINE Alu 1 312 0 2150 100 38 0 chr17 33586829 33587120 -51851360 + AluSp SINE Alu 12 313 0 22 70 0 0 chr17 33587122 33587165 -51851315 + AT_rich Low_complexity Low_complexity 1 43 0 2141 129 0 3 chr17 33587275 33587577 -51850903 - AluSx SINE Alu -11 301 1 2303 104 3 10 chr17 33587999 33588307 -51850173 - AluSx SINE Alu -6 306 1 341 298 69 38 chr17 33588434 33588565 -51849915 + L2 LINE L2 3138 3272 0 489 249 61 66 chr17 33588594 33588791 -51849689 + L1ME4a LINE L1 5619 5814 -307 241 234 58 71 chr17 33588835 33588897 -51849583 + L1ME4a LINE L1 5970 6031 -90 1886 151 0 10 chr17 33588897 33589201 -51849279 - AluJb SINE Alu -11 301 1 241 234 58 71 chr17 33589201 33589292 -51849188 + L1ME4a LINE L1 6031 6121 0 1477 184 59 0 chr17 33589455 33589726 -51848754 - AluJo SINE Alu -23 289 3 325 180 17 34 chr17 33590368 33590455 -51848025 - MIR SINE MIR -75 187 104 698 236 50 32 chr17 33591151 33591371 -51847109 - L1ME2 LINE L1 0 6164 5941 276 100 0 0 chr17 33592201 33592241 -51846239 + (CTA)n Simple_repeat Simple_repeat 2 41 0 575 166 50 83 chr17 33592317 33592498 -51845982 + MLT1D LTR MaLR 143 317 -188 212 318 175 24 chr17 33592512 33592638 -51845842 - MIR SINE MIR -111 151 7 1438 153 107 55 chr17 33592854 33593181 -51845299 + MER2 DNA MER2_type 1 344 0 2085 170 128 29 chr17 33593762 33594214 -51844266 + MLT1D LTR MaLR 1 497 -8 1357 218 63 33 chr17 33594291 33594548 -51843932 - MLT1I LTR MaLR 0 409 134 2033 110 0 20 chr17 33594548 33594710 -51843770 - AluSx SINE Alu -17 295 140 2296 77 0 0 chr17 33594710 33595007 -51843473 - AluSg SINE Alu -12 298 2 2033 110 0 20 chr17 33595007 33595145 -51843335 - AluSx SINE Alu -172 140 1 1357 218 63 33 chr17 33595145 33595282 -51843198 - MLT1I LTR MaLR -275 134 3 22 35 0 0 chr17 33595399 33595428 -51843052 + AT_rich Low_complexity Low_complexity 1 29 0 892 190 77 23 chr17 33597124 33597234 -51841246 - MER63 DNA MER1_type 0 1061 958 1818 157 7 13 chr17 33597234 33597539 -51840941 + AluJo SINE Alu 1 303 -9 892 190 77 23 chr17 33597539 33597649 -51840831 - MER63 DNA MER1_type -103 958 829 272 161 268 0 chr17 33597652 33597708 -51840772 + MER81 DNA DNA 2 72 -42 * 352 59 0 0 chr17 33597704 33597755 -51840725 - MER63 DNA MER1_type -416 645 595 2280 93 0 0 chr17 33597755 33598056 -51840424 + AluSg SINE Alu 1 301 -9 1110 139 0 0 chr17 33598059 33598231 -51840249 + AluJb SINE Alu 134 305 -7 1424 146 79 8 chr17 33598242 33598495 -51839985 + AluJo SINE Alu 1 271 -41 207 0 0 0 chr17 33598536 33598559 -51839921 + (TG)n Simple_repeat Simple_repeat 2 24 0 201 236 56 14 chr17 33598561 33598633 -51839847 + MIR SINE MIR 185 259 -3 226 347 193 30 chr17 33598656 33599279 -51839201 + L2 LINE L2 2254 2977 -337 2242 98 10 0 chr17 33599364 33599671 -51838809 + AluSx SINE Alu 1 310 -2 2129 92 20 0 chr17 33603463 33603756 -51834724 - AluSp SINE Alu -14 299 1 733 127 140 95 chr17 33603811 33604032 -51834448 + AluJb SINE Alu 70 300 -12 2345 61 0 3 chr17 33604934 33605230 -51833250 + AluSq SINE Alu 1 295 -18 225 0 0 0 chr17 33606202 33606227 -51832253 + (T)n Simple_repeat Simple_repeat 1 25 0 1543 132 21 121 chr17 33608774 33609114 -51829366 + AluJb SINE Alu 1 306 -6 2071 106 20 0 chr17 33609114 33609406 -51829074 + AluSx SINE Alu 1 298 -14 206 116 23 0 chr17 33609665 33609708 -51828772 + (TA)n Simple_repeat Simple_repeat 2 45 0 436 251 55 31 chr17 33610780 33610850 -51827630 - L1MA10 LINE L1 0 6334 6265 430 268 47 32 chr17 33610850 33611040 -51827440 - L1ME1 LINE L1 -61 6105 5913 380 235 11 38 chr17 33611044 33611073 -51827407 + L1MC4 LINE L1 6615 6643 -1399 1973 106 0 17 chr17 33611073 33611365 -51827115 + AluSx SINE Alu 1 287 -25 252 0 0 0 chr17 33611369 33611397 -51827083 + (CA)n Simple_repeat Simple_repeat 2 29 0 380 235 11 38 chr17 33611397 33611489 -51826991 + L1MC4 LINE L1 6646 6703 -1339 325 264 11 22 chr17 33611485 33611576 -51826904 + L1MC4 LINE L1 6614 6703 -1339 * 1186 213 84 0 chr17 33611597 33611884 -51826596 - L1ME1 LINE L1 -270 5896 5586 297 118 0 0 chr17 33611905 33611956 -51826524 + (TA)n Simple_repeat Simple_repeat 1 51 0 2027 117 0 0 chr17 33611956 33612239 -51826241 - AluSx SINE Alu -29 283 1 474 238 158 6 chr17 33612269 33612433 -51826047 - MER5A DNA MER1_type 0 189 1 306 232 27 71 chr17 33612512 33612624 -51825856 + LTR16A LTR ERVL 103 209 -241 1767 99 56 0 chr17 33612957 33613209 -51825271 + AluSx SINE Alu 6 271 -41 1929 127 0 7 chr17 33614426 33614710 -51823770 - AluSx SINE Alu -30 282 1 198 0 0 0 chr17 33615033 33615055 -51823425 + (A)n Simple_repeat Simple_repeat 1 22 0 617 202 0 0 chr17 33615310 33615414 -51823066 - AluJb SINE Alu -17 295 192 657 147 0 9 chr17 33615474 33615583 -51822897 + AluJb SINE Alu 26 133 -179 1427 140 0 0 chr17 33615584 33615806 -51822674 + AluSg/x SINE Alu 86 307 -5 1357 177 59 15 chr17 33615810 33616081 -51822399 + AluJb SINE Alu 1 283 -29 2211 97 0 10 chr17 33616482 33616782 -51821698 - AluSx SINE Alu -15 297 1 1562 243 32 80 chr17 33617178 33617245 -51821235 + MLT1G1 LTR MaLR 5 74 -521 1730 169 0 3 chr17 33617245 33617546 -51820934 - AluJb SINE Alu -10 302 3 1562 243 32 80 chr17 33617546 33617657 -51820823 + MLT1G1 LTR MaLR 74 189 -406 643 220 94 0 chr17 33617657 33617816 -51820664 + FAM SINE Alu 1 174 -1 1562 243 32 80 chr17 33617816 33618162 -51820318 + MLT1G1 LTR MaLR 189 505 -90 1486 197 3 10 chr17 33618207 33618501 -51819979 + AluJo SINE Alu 1 292 -20 2096 100 14 3 chr17 33618874 33619163 -51819317 + AluSq SINE Alu 1 292 -21 419 222 201 14 chr17 33619249 33619393 -51819087 + MER5A DNA MER1_type 13 183 -6 184 333 0 13 chr17 33619567 33619645 -51818835 - MIR SINE MIR -80 128 52 2171 80 3 3 chr17 33620861 33621173 -51817307 + AluSq SINE Alu 1 312 0 932 144 6 33 chr17 33621187 33621368 -51817112 + FRAM SINE Alu 1 176 0 945 113 75 24 chr17 33621379 33621683 -51816797 + THE1C LTR MaLR 1 375 0 492 255 21 35 chr17 33621739 33621880 -51816600 + MER5A DNA MER1_type 7 145 -44 2615 39 0 0 chr17 33622065 33622376 -51816104 + AluY SINE Alu 1 311 0 1774 133 28 14 chr17 33622631 33622917 -51815563 - AluJb SINE Alu -16 296 7 1572 162 68 0 chr17 33622933 33623211 -51815269 - AluJb SINE Alu -15 297 1 1913 129 28 0 chr17 33623250 33623537 -51814943 + AluSx SINE Alu 1 295 -17 1994 118 0 58 chr17 33623746 33623924 -51814556 - AluSx SINE Alu -1 311 159 1985 123 3 0 chr17 33623924 33624217 -51814263 - AluSg SINE Alu -16 294 1 1994 118 0 58 chr17 33624217 33624367 -51814113 - AluSx SINE Alu -153 159 2 2383 81 0 0 chr17 33624733 33625042 -51813438 + AluSc SINE Alu 1 309 0 219 36 0 0 chr17 33625203 33625231 -51813249 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 203 255 0 0 chr17 33626049 33626096 -51812384 + CT-rich Low_complexity Low_complexity 1 47 0 634 200 16 0 chr17 33626192 33626317 -51812163 + FLAM_A SINE Alu 11 137 -5 2472 57 0 0 chr17 33626398 33626696 -51811784 + AluY SINE Alu 1 298 -13 342 181 37 0 chr17 33627242 33627321 -51811159 + L1ME3A LINE L1 5532 5615 -555 442 248 135 0 chr17 33627326 33627428 -51811052 + L1ME3A LINE L1 5705 5832 -338 971 87 0 36 chr17 33627428 33627566 -51810914 + FLAM_C SINE Alu 1 133 0 442 248 135 0 chr17 33627566 33627604 -51810876 + L1ME3A LINE L1 5832 5864 -306 309 109 0 0 chr17 33627652 33627698 -51810782 + (CA)n Simple_repeat Simple_repeat 2 47 0 221 314 85 51 chr17 33628068 33628186 -51810294 + L2 LINE L2 3147 3268 -4 247 282 54 49 chr17 33629528 33629691 -51808789 - MIR SINE MIR -60 148 18 188 298 10 87 chr17 33629833 33629937 -51808543 + MIR SINE MIR 111 206 -56 28 48 0 0 chr17 33630448 33630490 -51807990 + GC_rich Low_complexity Low_complexity 1 42 0 207 0 0 0 chr17 33630732 33630755 -51807725 + (CGCGG)n Simple_repeat Simple_repeat 1 23 0 32 111 0 0 chr17 33630805 33630949 -51807531 + GC_rich Low_complexity Low_complexity 1 144 0 1176 138 67 0 chr17 33632668 33632863 -51805617 + MER3 DNA MER1_type 1 208 -1 1429 167 51 31 chr17 33632904 33633061 -51805419 - AluJb SINE Alu -11 301 134 1853 86 75 14 chr17 33633061 33633340 -51805140 - AluSp SINE Alu -17 296 1 1429 167 51 31 chr17 33633340 33633476 -51805004 - AluJb SINE Alu -178 134 2 372 145 0 0 chr17 33634865 33634927 -51803553 - AluSx SINE Alu -2 300 239 1084 101 5 74 chr17 33634927 33635038 -51803442 - AluSx SINE Alu -136 176 82 2294 54 9 31 chr17 33635038 33635355 -51803125 + AluY SINE Alu 1 310 -1 1084 101 5 74 chr17 33635355 33635432 -51803048 - AluSx SINE Alu -230 82 1 313 266 191 0 chr17 33635432 33635558 -51802922 - MIR SINE MIR -72 190 42 1220 94 0 6 chr17 33635652 33635822 -51802658 - AluSp SINE Alu -8 305 137 1833 136 0 10 chr17 33635862 33636157 -51802323 + AluSx SINE Alu 5 296 -16 2233 93 0 3 chr17 33636158 33636460 -51802020 + AluSx SINE Alu 1 301 -11 191 254 0 36 chr17 33636999 33637054 -51801426 + L2 LINE L2 3239 3291 -22 2139 100 0 29 chr17 33638028 33638337 -51800143 - AluSx SINE Alu -12 300 1 1882 131 21 3 chr17 33639426 33639708 -51798772 - AluSx SINE Alu -16 296 10 1554 201 7 13 chr17 33639844 33640147 -51798333 - AluJb SINE Alu -11 301 1 2283 97 13 0 chr17 33642551 33642850 -51795630 - AluSg SINE Alu -7 303 1 2263 107 7 0 chr17 33642928 33643226 -51795254 + AluSq SINE Alu 1 300 -13 360 296 92 83 chr17 33644774 33644928 -51793552 - MARNA DNA Mariner -173 413 262 2044 105 45 0 chr17 33644928 33645214 -51793266 + AluSx SINE Alu 1 299 -13 2230 111 0 19 chr17 33645216 33645532 -51792948 + AluSg SINE Alu 1 310 0 360 296 92 83 chr17 33645532 33645722 -51792758 - MARNA DNA Mariner -324 262 63 300 333 102 0 chr17 33645605 33645752 -51792728 + MARNA DNA Mariner 394 555 -31 * 255 200 100 0 chr17 33645752 33645812 -51792668 + MIR SINE MIR 197 262 0 1036 157 0 0 chr17 33646448 33646601 -51791879 - AluJb SINE Alu -25 287 135 1621 185 6 45 chr17 33647419 33647733 -51790747 + AluJo SINE Alu 1 302 -10 2035 130 7 20 chr17 33647818 33648118 -51790362 - AluSx SINE Alu -16 296 1 2336 92 0 0 chr17 33648327 33648621 -51789859 + AluSx SINE Alu 1 294 -18 2267 105 7 0 chr17 33648887 33649192 -51789288 + AluSx SINE Alu 1 307 -5 228 263 50 20 chr17 33650548 33650647 -51787833 - L1ME4a LINE L1 -65 6056 5955 2420 68 3 0 chr17 33651045 33651341 -51787139 - AluSp SINE Alu -16 297 1 2143 118 0 20 chr17 33651487 33651793 -51786687 + AluSx SINE Alu 2 301 -11 384 328 113 38 chr17 33651907 33652026 -51786454 - MIR SINE MIR -6 256 147 924 143 0 0 chr17 33652026 33652159 -51786321 + FLAM_C SINE Alu 1 133 0 384 328 113 38 chr17 33652159 33652277 -51786203 - MIR SINE MIR -115 147 1 451 304 175 0 chr17 33652286 33652457 -51786023 + MIR SINE MIR 60 260 -2 2017 152 0 0 chr17 33652597 33652893 -51785587 - AluSx SINE Alu -16 296 1 2110 112 17 7 chr17 33653522 33653818 -51784662 - AluSx SINE Alu -12 300 2 2032 145 3 0 chr17 33654264 33654554 -51783926 - AluJb SINE Alu -21 291 1 978 154 18 72 chr17 33654677 33654898 -51783582 + L1MC5 LINE L1 7702 7910 -51 2250 102 0 3 chr17 33655533 33655828 -51782652 - AluSx SINE Alu -18 294 1 2207 98 10 7 chr17 33655839 33656135 -51782345 - AluSx SINE Alu -15 297 1 1422 94 0 33 chr17 33656704 33656917 -51781563 - AluY SINE Alu 0 311 106 768 171 47 0 chr17 33656917 33657046 -51781434 + AluSp/q SINE Alu 170 304 -9 975 121 8 0 chr17 33657103 33657235 -51781245 - FRAM SINE Alu -45 131 1 776 196 63 13 chr17 33657566 33657724 -51780756 + FRAM SINE Alu 1 166 0 2138 101 0 17 chr17 33658027 33658346 -51780134 - AluSg SINE Alu 0 314 1 342 244 17 50 chr17 33658359 33658478 -51780002 - MER5A DNA MER1_type -9 180 66 224 175 0 0 chr17 33658825 33658865 -51779615 + L2 LINE L2 3274 3313 0 1942 135 103 19 chr17 33659347 33659658 -51778822 + MER1B DNA MER1_type 1 337 0 783 218 0 0 chr17 33659711 33659844 -51778636 - FLAM_A SINE Alu 0 133 1 2051 132 10 6 chr17 33660148 33660459 -51778021 + AluSx SINE Alu 1 312 0 1670 135 0 111 chr17 33660481 33660612 -51777868 + AluJo SINE Alu 3 147 -165 2444 81 0 0 chr17 33660612 33660909 -51777571 - AluSx SINE Alu -15 297 1 1670 135 0 111 chr17 33660909 33661110 -51777370 + AluJo SINE Alu 147 298 -14 2056 153 0 0 chr17 33661110 33661418 -51777062 + AluSx SINE Alu 1 308 -4 235 323 0 0 chr17 33661585 33661675 -51776805 - MIR SINE MIR -62 146 65 1781 163 3 3 chr17 33661716 33661998 -51776482 + AluJb SINE Alu 1 282 -30 405 54 0 0 chr17 33662001 33662057 -51776423 + (CA)n Simple_repeat Simple_repeat 1 56 0 186 83 21 42 chr17 33662185 33662233 -51776247 + (TA)n Simple_repeat Simple_repeat 2 48 0 2871 76 3 0 chr17 33662417 33662772 -51775708 + L1PA13 LINE L1 5805 6160 -3 2200 114 10 3 chr17 33662899 33663206 -51775274 + AluSx SINE Alu 1 309 -3 2090 153 0 0 chr17 33663214 33663521 -51774959 + AluSx SINE Alu 1 307 -5 263 314 67 62 chr17 33664299 33664484 -51773996 + L2 LINE L2 2646 2834 -480 2208 111 14 0 chr17 33664484 33664773 -51773707 - AluSx SINE Alu -19 293 1 263 314 67 62 chr17 33664773 33664797 -51773683 + L2 LINE L2 2834 2856 -458 344 227 13 0 chr17 33664824 33664899 -51773581 - MIR SINE MIR -157 105 30 2262 88 0 10 chr17 33665014 33665354 -51773126 + AluY SINE Alu 1 311 0 21 0 0 0 chr17 33665364 33665385 -51773095 + AT_rich Low_complexity Low_complexity 1 21 0 2302 89 20 0 chr17 33666102 33666406 -51772074 + AluSg SINE Alu 1 310 0 2494 73 0 10 chr17 33666621 33666935 -51771545 + AluSq SINE Alu 1 311 -2 183 325 0 25 chr17 33668239 33668283 -51770197 - MIR SINE MIR 0 262 219 2225 103 3 0 chr17 33668283 33668573 -51769907 - AluSx SINE Alu -21 291 1 183 325 0 25 chr17 33668573 33668608 -51769872 - MIR SINE MIR -43 219 185 2259 104 7 0 chr17 33668696 33668993 -51769487 - AluSq SINE Alu -14 299 1 1834 151 19 19 chr17 33669073 33669384 -51769096 + AluJb SINE Alu 1 311 -1 1629 154 4 36 chr17 33669384 33669664 -51768816 + AluJo SINE Alu 22 292 -20 1454 113 80 0 chr17 33670501 33670714 -51767766 - MER30 DNA MER1_type 0 230 1 242 322 110 0 chr17 33670716 33670834 -51767646 + MIR SINE MIR 91 221 -41 1503 125 0 9 chr17 33670859 33671075 -51767405 + AluJo SINE Alu 87 300 -12 862 228 145 4 chr17 33671096 33671324 -51767156 + MIR SINE MIR 3 262 0 2583 53 0 3 chr17 33671374 33671677 -51766803 + AluY SINE Alu 1 302 -9 802 171 0 23 chr17 33673070 33673199 -51765281 - FLAM_C SINE Alu -3 130 5 1857 153 24 0 chr17 33673240 33673535 -51764945 + AluSx SINE Alu 1 302 -10 23 33 0 0 chr17 33674053 33674083 -51764397 + AT_rich Low_complexity Low_complexity 1 30 0 923 141 0 0 chr17 33674085 33674213 -51764267 - FLAM_C SINE Alu -5 128 1 2234 116 0 0 chr17 33675129 33675432 -51763048 + AluSx SINE Alu 1 303 -9 365 269 56 19 chr17 33675801 33675909 -51762571 + L2 LINE L2 3188 3299 -14 716 229 8 0 chr17 33676276 33676407 -51762073 + FLAM_A SINE Alu 1 132 -1 1815 148 0 68 chr17 33676416 33676741 -51761739 - AluJo SINE Alu -9 303 1 865 255 82 5 chr17 33676883 33677091 -51761389 + MER58A DNA MER1_type 1 224 0 2306 109 0 3 chr17 33677142 33677444 -51761036 + AluSq SINE Alu 1 301 -12 1826 173 7 0 chr17 33677519 33677814 -51760666 - AluJb SINE Alu -15 297 1 198 0 0 0 chr17 33678475 33678497 -51759983 + (A)n Simple_repeat Simple_repeat 1 22 0 311 377 34 17 chr17 33678503 33678678 -51759802 + MIR SINE MIR 20 197 -65 2125 122 0 3 chr17 33678732 33679027 -51759453 + AluSg SINE Alu 3 296 -14 2040 146 0 7 chr17 33679582 33679883 -51758597 - AluSx SINE Alu -13 299 1 2139 79 25 14 chr17 33680455 33680789 -51757691 + AluSp SINE Alu 1 337 0 302 305 30 54 chr17 33680941 33681108 -51757372 - MIR SINE MIR -10 252 90 1707 184 0 0 chr17 33681113 33681417 -51757063 + AluJb SINE Alu 1 304 0 980 178 18 0 chr17 33681422 33681585 -51756895 + FRAM SINE Alu 1 158 -18 180 398 11 11 chr17 33682141 33682234 -51756246 + MIR SINE MIR 32 124 -84 2137 122 0 0 chr17 33683009 33683303 -51755177 + AluSx SINE Alu 1 294 -18 2505 57 0 25 chr17 33683305 33683619 -51754861 + AluY SINE Alu 1 306 -5 2130 119 7 0 chr17 33684037 33684339 -51754141 + AluSx SINE Alu 1 304 -8 869 154 0 7 chr17 33684680 33684816 -51753664 + AluJb SINE Alu 1 135 -177 1794 159 21 0 chr17 33684816 33685106 -51753374 + AluJb SINE Alu 1 296 -16 2361 64 0 0 chr17 33685108 33685429 -51753051 + AluY SINE Alu 1 321 0 343 288 32 8 chr17 33685432 33685557 -51752923 + L1MC4a LINE L1 6545 6672 -1136 1447 69 6 0 chr17 33685557 33685730 -51752750 - AluSp SINE Alu -138 175 2 826 207 178 55 chr17 33685730 33686182 -51752298 + L1MC5 LINE L1 6820 7423 -538 525 255 82 48 chr17 33686196 33686372 -51752108 + MER21B LTR ERV1 313 531 -400 1998 162 87 58 chr17 33686373 33686730 -51751750 + L1MD3 LINE L1 7471 7816 -179 2088 135 0 3 chr17 33686730 33687026 -51751454 - AluSx SINE Alu -17 295 1 1592 208 3 3 chr17 33687027 33687321 -51751159 - AluJo SINE Alu -18 294 1 1998 162 87 58 chr17 33687321 33687442 -51751038 + L1MD3 LINE L1 7815 7965 -30 816 171 0 0 chr17 33687445 33687562 -51750918 + AluJb SINE Alu 2 118 -194 24 67 0 0 chr17 33687568 33687613 -51750867 + AT_rich Low_complexity Low_complexity 1 45 0 326 223 58 58 chr17 33687628 33687749 -51750731 + L1MC5 LINE L1 7471 7591 -370 180 0 0 0 chr17 33687749 33687769 -51750711 + (A)n Simple_repeat Simple_repeat 1 20 0 2456 193 20 64 chr17 33687769 33688233 -51750247 + L1ME2 LINE L1 5423 5857 -307 2217 100 10 10 chr17 33688233 33688542 -51749938 + AluSx SINE Alu 3 311 -1 2456 193 20 64 chr17 33688542 33688672 -51749808 + L1ME2 LINE L1 5857 5991 -173 534 249 6 36 chr17 33688748 33688832 -51749648 + L1MC5 LINE L1 7717 7795 -166 2129 119 30 0 chr17 33688832 33689135 -51749345 + AluSx SINE Alu 1 312 0 534 249 6 36 chr17 33689135 33689215 -51749265 + L1MC5 LINE L1 7795 7876 -85 580 207 44 7 chr17 33689377 33689512 -51748968 + MLT1H1 LTR MaLR 416 555 0 236 325 44 26 chr17 33689999 33690113 -51748367 + MER5B DNA MER1_type 63 178 0 819 144 0 0 chr17 33691116 33691234 -51747246 + AluJb SINE Alu 1 118 -194 29 28 0 0 chr17 33691234 33691270 -51747210 + AT_rich Low_complexity Low_complexity 1 36 0 571 216 7 68 chr17 33691297 33691445 -51747035 + MLT1E2 LTR MaLR 62 200 -424 681 145 0 60 chr17 33691459 33691576 -51746904 + FLAM_C SINE Alu 2 111 -32 2549 84 0 0 chr17 33691624 33691933 -51746547 - AluY SINE Alu -2 309 1 981 164 20 0 chr17 33691949 33692101 -51746379 + AluJb SINE Alu 131 285 -27 1465 212 62 44 chr17 33692146 33692551 -51745929 + MLT1E2 LTR MaLR 207 618 -8 2148 132 0 7 chr17 33692705 33693000 -51745480 - AluSx SINE Alu -19 293 1 984 170 0 0 chr17 33693842 33693995 -51744485 - FRAM SINE Alu -19 157 5 2122 117 17 3 chr17 33694008 33694308 -51744172 - AluSg SINE Alu -4 306 3 238 159 0 0 chr17 33694507 33694551 -51743929 + HsTC2 DNA Tc2 1 44 -1854 883 179 6 13 chr17 33694558 33694714 -51743766 + FRAM SINE Alu 1 155 -21 21 36 0 0 chr17 33694717 33694745 -51743735 + AT_rich Low_complexity Low_complexity 1 28 0 1540 181 0 29 chr17 33694765 33695046 -51743434 + AluJo SINE Alu 25 297 -15 425 259 30 8 chr17 33695047 33695178 -51743302 + MER104 DNA Tc2 47 180 0 781 227 16 0 chr17 33695178 33695363 -51743117 + MIR SINE MIR 75 262 0 1942 127 3 59 chr17 33695518 33695840 -51742640 + AluSx SINE Alu 1 304 -8 2341 84 3 7 chr17 33695841 33696150 -51742330 + AluSp SINE Alu 1 308 -5 373 109 0 0 chr17 33696168 33696223 -51742257 - Alu SINE Alu -5 297 243 866 98 0 0 chr17 33696227 33696339 -51742141 + AluSc SINE Alu 182 293 -16 1342 111 5 58 chr17 33696339 33696547 -51741933 - AluSq SINE Alu -116 197 1 2280 129 0 0 chr17 33696650 33696960 -51741520 + AluSg SINE Alu 1 310 0 1778 179 29 0 chr17 33697461 33697741 -51740739 - AluJo SINE Alu -24 288 1 1750 152 22 0 chr17 33697897 33698216 -51740264 + AluSx SINE Alu 1 325 0 2125 131 0 16 chr17 33698217 33698354 -51740126 + AluSx SINE Alu 1 139 -173 2302 104 0 0 chr17 33698354 33698652 -51739828 + AluSg SINE Alu 1 298 -12 2125 131 0 16 chr17 33698652 33698827 -51739653 + AluSx SINE Alu 139 308 -4 1637 175 0 55 chr17 33698896 33699205 -51739275 - AluJb SINE Alu -20 292 1 1363 193 71 4 chr17 33699316 33699585 -51738895 - AluJb SINE Alu -25 287 1 499 66 0 0 chr17 33799842 33799903 -51638577 - Alu SINE Alu -248 62 2 427 231 60 8 chr17 33799916 33800033 -51638447 + MIR SINE MIR 124 246 -16 201 294 0 0 chr17 33800035 33800127 -51638353 + (TAG)n Simple_repeat Simple_repeat 2 93 0 1548 168 88 15 chr17 33800173 33800447 -51638033 + AluJo SINE Alu 1 294 -18 485 251 6 0 chr17 33800447 33800614 -51637866 + (TAG)n Simple_repeat Simple_repeat 1 168 0 239 258 12 18 chr17 33800636 33800799 -51637681 + (TAG)n Simple_repeat Simple_repeat 3 164 0 360 300 38 35 chr17 33801585 33801762 -51636718 + MIR SINE MIR 42 262 0 258 238 14 86 chr17 33802620 33802764 -51635716 + MIR3 SINE MIR 56 189 -19 1233 246 113 54 chr17 33803725 33803755 -51634725 - L2 LINE L2 0 3313 3286 2103 106 31 7 chr17 33803755 33804048 -51634432 + AluSx SINE Alu 3 302 -10 1233 246 113 54 chr17 33804048 33804897 -51633583 - L2 LINE L2 -27 3286 2359 340 339 0 31 chr17 33805013 33805143 -51633337 + MIR SINE MIR 16 141 -121 387 0 0 0 chr17 33805149 33805192 -51633288 + (TG)n Simple_repeat Simple_repeat 1 43 0 2389 95 0 0 chr17 33805245 33805550 -51632930 + AluY SINE Alu 1 305 -6 2100 117 0 45 chr17 33805651 33805960 -51632520 - AluSx SINE Alu -17 295 1 532 284 49 0 chr17 33805964 33806126 -51632354 + MIR SINE MIR 91 260 -2 413 333 44 11 chr17 33806450 33806633 -51631847 - MIR3 SINE MIR -13 195 7 414 0 0 0 chr17 33807113 33807159 -51631321 + (TG)n Simple_repeat Simple_repeat 2 47 0 1651 54 0 5 chr17 33808340 33808543 -51629937 + L1PA8 LINE L1 5956 6157 -15 216 296 157 31 chr17 33808595 33808675 -51629805 - MIR SINE MIR -50 212 143 2028 165 3 0 chr17 33808675 33808984 -51629496 + AluJb SINE Alu 1 310 -2 216 296 157 31 chr17 33808984 33809062 -51629418 - MIR SINE MIR -119 143 34 312 102 0 0 chr17 33809264 33809313 -51629167 + (CTG)n Simple_repeat Simple_repeat 2 50 0 1941 112 4 18 chr17 33809320 33809598 -51628882 - AluJb SINE Alu -38 274 1 338 349 38 0 chr17 33809842 33809974 -51628506 - MIR SINE MIR -108 154 18 2283 81 0 11 chr17 33810047 33810361 -51628119 - AluY SINE Alu 0 311 1 307 276 92 51 chr17 33810397 33810593 -51627887 + L1MC4a LINE L1 5948 6151 -1657 2026 154 19 6 chr17 33810601 33810965 -51627515 - L1MB3 LINE L1 -1 6182 5814 324 98 0 0 chr17 33811008 33811059 -51627421 - L1MB3 LINE L1 -349 5834 5784 311 264 58 11 chr17 33811059 33811146 -51627334 - L1MC4 LINE L1 -1348 6694 6604 2397 93 3 0 chr17 33811216 33811517 -51626963 + AluSq SINE Alu 1 302 -11 931 131 20 7 chr17 33811517 33811670 -51626810 - L1M3 LINE L1 -422 5749 5595 213 257 99 99 chr17 33811988 33812140 -51626340 + MIR SINE MIR 34 185 -77 573 253 0 0 chr17 33812849 33813011 -51625469 + CT-rich Low_complexity Low_complexity 2 163 0 241 261 0 15 chr17 33813044 33813109 -51625371 + CT-rich Low_complexity Low_complexity 4 67 0 2182 99 3 38 chr17 33813309 33813622 -51624858 - AluSq SINE Alu -11 302 1 496 307 93 19 chr17 33814030 33814245 -51624235 + L2 LINE L2 3082 3312 -1 2380 105 0 0 chr17 33814432 33814738 -51623742 + AluSg SINE Alu 1 306 -4 2270 92 3 0 chr17 33814792 33815097 -51623383 + AluSp SINE Alu 1 306 0 203 299 92 46 chr17 33815204 33815291 -51623189 - L2 LINE L2 -21 3251 3161 2247 115 0 0 chr17 33815293 33815581 -51622899 + AluSq SINE Alu 12 299 -14 1024 92 0 35 chr17 33815975 33816117 -51622363 - FLAM_C SINE Alu -6 137 1 956 137 27 0 chr17 33816117 33816263 -51622217 - MER20 DNA MER1_type -21 198 49 2364 261 34 9 chr17 33816263 33817067 -51621413 - MER45C DNA AcHobo -1 952 66 231 250 18 0 chr17 33817086 33817142 -51621338 - MER20 DNA MER1_type -162 57 1 202 340 47 19 chr17 33817147 33817253 -51621227 - L2 LINE L2 -202 3070 2962 680 289 53 13 chr17 33817808 33818033 -51620447 - MIR SINE MIR -16 246 13 270 188 60 128 chr17 33818031 33818074 -51620406 + MIR SINE MIR 124 168 -94 * 2021 138 3 0 chr17 33818074 33818384 -51620096 + AluSx SINE Alu 1 311 0 270 188 60 128 chr17 33818384 33818488 -51619992 + MIR SINE MIR 168 262 0 428 251 74 12 chr17 33818919 33819056 -51619424 - MIR SINE MIR -59 149 3 285 247 62 0 chr17 33819166 33819247 -51619233 + MIR SINE MIR 137 222 -40 389 319 37 37 chr17 33819257 33819420 -51619060 + L2 LINE L2 3102 3264 -8 300 254 29 60 chr17 33819882 33820037 -51618443 + MIR SINE MIR 42 191 -61 236 157 39 0 chr17 33820126 33820177 -51618303 + CT-rich Low_complexity Low_complexity 2 54 0 392 283 48 24 chr17 33820288 33820454 -51618026 + MIR SINE MIR 23 192 -70 277 217 0 0 chr17 33820575 33820621 -51617859 - L2 LINE L2 -2 3270 3225 191 311 0 0 chr17 33820625 33820670 -51617810 - L2 LINE L2 -3 3269 3225 342 258 51 84 chr17 33821242 33821420 -51617060 - MIR SINE MIR -71 191 20 303 333 30 0 chr17 33821411 33821510 -51616970 + MIR3 SINE MIR 85 186 -22 * 1189 157 98 0 chr17 33821539 33821743 -51616737 + MER58A DNA MER1_type 1 224 0 2396 82 7 0 chr17 33821867 33822170 -51616310 - AluY SINE Alu -6 305 1 445 184 124 5 chr17 33822227 33822410 -51616070 - L1ME2 LINE L1 -16 6148 5886 1689 159 48 24 chr17 33822419 33822708 -51615772 - AluJo SINE Alu -15 297 2 331 261 113 26 chr17 33822750 33822865 -51615615 - L2 LINE L2 -1 3312 3188 219 274 84 11 chr17 33822987 33823082 -51615398 - MIR3 SINE MIR 0 208 107 498 256 117 22 chr17 33823799 33823979 -51614501 - MIR SINE MIR -64 198 2 182 353 39 20 chr17 33824087 33824189 -51614291 + MIR SINE MIR 48 151 -111 275 263 10 0 chr17 33825602 33825700 -51612780 - MIR SINE MIR -62 146 94 22 0 0 0 chr17 33830672 33830694 -51607786 + AT_rich Low_complexity Low_complexity 1 22 0 2135 112 10 14 chr17 33831792 33832087 -51606393 + AluSq SINE Alu 1 294 -19 180 97 0 0 chr17 33832087 33832118 -51606362 + (TTAA)n Simple_repeat Simple_repeat 2 32 0 187 260 58 106 chr17 33833041 33833145 -51605335 + L3b LINE CR1 1435 1533 -50 2274 82 3 38 chr17 33834173 33834513 -51603967 - AluY SINE Alu 0 311 3 425 323 82 76 chr17 33834561 33834864 -51603616 - L2 LINE L2 0 3272 2968 727 294 63 8 chr17 33835498 33835736 -51602744 + MIR SINE MIR 12 262 0 1859 140 10 40 chr17 33835997 33836297 -51602183 + AluJo SINE Alu 5 295 -17 327 280 98 15 chr17 33836698 33836830 -51601650 + L3 LINE CR1 1403 1545 -32 2352 100 0 3 chr17 33836971 33837271 -51601209 + AluSq SINE Alu 1 299 -14 234 0 0 0 chr17 33838164 33838190 -51600290 + (TCTG)n Simple_repeat Simple_repeat 1 26 0 417 187 112 9 chr17 33838667 33838774 -51599706 - MER103 DNA DNA -13 153 36 1081 96 0 20 chr17 33839080 33839226 -51599254 + FLAM_C SINE Alu 1 143 0 653 167 42 0 chr17 33839249 33839369 -51599111 - FLAM_C SINE Alu -7 126 2 485 280 25 0 chr17 33842227 33842345 -51596135 - MIR SINE MIR -68 140 20 203 330 50 30 chr17 33842351 33842451 -51596029 - L2 LINE L2 -32 3240 3139 956 161 0 0 chr17 33842604 33842753 -51595727 - FRAM SINE Alu -6 170 22 406 265 60 0 chr17 33842886 33843003 -51595477 + MIR SINE MIR 84 207 -55 2600 44 0 0 chr17 33843455 33843750 -51594730 + AluY SINE Alu 1 295 -16 2185 108 0 35 chr17 33843759 33844074 -51594406 + AluSx SINE Alu 1 304 -8 495 346 14 37 chr17 33845599 33845813 -51592667 - MIR SINE MIR -2 260 52 225 0 0 0 chr17 33845903 33845928 -51592552 + (CA)n Simple_repeat Simple_repeat 2 26 0 203 88 29 0 chr17 33847094 33847128 -51591352 + (TA)n Simple_repeat Simple_repeat 2 36 0 * 273 57 0 0 chr17 33847127 33847162 -51591318 + (CA)n Simple_repeat Simple_repeat 2 36 0 1441 165 81 28 chr17 33847262 33847584 -51590896 - MER58B DNA MER1_type 0 341 3 588 252 90 13 chr17 33847593 33847748 -51590732 + MER5B DNA MER1_type 1 167 -11 523 217 159 25 chr17 33847760 33847917 -51590563 - MER5A DNA MER1_type -6 183 6 505 280 122 11 chr17 33848027 33848216 -51590264 + MIR SINE MIR 9 218 -44 201 218 0 36 chr17 33848269 33848324 -51590156 + CT-rich Low_complexity Low_complexity 3 55 0 2550 44 6 25 chr17 33848660 33848977 -51589503 - AluY SINE Alu 0 311 1 304 253 300 20 chr17 33849570 33849720 -51588760 + MIR SINE MIR 37 228 -34 238 253 38 108 chr17 33849921 33850079 -51588401 + MER5A DNA MER1_type 3 149 -29 510 137 0 0 chr17 33850085 33850158 -51588322 + FRAM SINE Alu 26 98 -78 420 151 0 0 chr17 33850253 33850326 -51588154 + Alu SINE Alu 238 310 -2 298 270 264 6 chr17 33850432 33850591 -51587889 + MIR3 SINE MIR 8 207 -1 189 175 0 0 chr17 33850686 33850726 -51587754 + CT-rich Low_complexity Low_complexity 1 40 0 367 330 17 9 chr17 33851267 33851382 -51587098 + L2 LINE L2 3152 3267 -5 212 130 0 43 chr17 33851490 33851536 -51586944 + (TA)n Simple_repeat Simple_repeat 1 44 0 234 156 0 0 chr17 33852031 33852076 -51586404 + (ATGGTG)n Simple_repeat Simple_repeat 4 48 0 1395 169 56 16 chr17 33852811 33852891 -51585589 + AluJo SINE Alu 41 116 -196 261 57 0 0 chr17 33852891 33852926 -51585554 + (TAA)n Simple_repeat Simple_repeat 2 36 0 1395 169 56 16 chr17 33852926 33853094 -51585386 + AluJo SINE Alu 116 299 -13 438 243 140 29 chr17 33853218 33853354 -51585126 - L2 LINE L2 0 3313 3163 372 22 0 0 chr17 33855145 33855190 -51583290 + (GA)n Simple_repeat Simple_repeat 2 46 0 2184 116 0 3 chr17 33855534 33855826 -51582654 + AluSx SINE Alu 1 291 -21 2166 102 0 58 chr17 33855870 33856183 -51582297 - AluSx SINE Alu -17 295 1 202 221 191 15 chr17 33856711 33856779 -51581701 - L2 LINE L2 0 3313 3234 344 305 190 14 chr17 33856957 33857252 -51581228 - L2 LINE L2 -346 2968 2622 301 103 0 0 chr17 33857701 33857740 -51580740 + L2 LINE L2 3255 3293 -20 710 283 81 18 chr17 33857802 33858025 -51580455 - MIR SINE MIR -6 256 20 234 367 13 0 chr17 33858360 33858439 -51580041 - MIR3 SINE MIR -119 89 10 24 0 0 0 chr17 33858663 33858687 -51579793 + AT_rich Low_complexity Low_complexity 1 24 0 545 278 76 10 chr17 33859205 33859403 -51579077 - MIR SINE MIR -39 223 13 448 244 59 22 chr17 33859411 33859546 -51578934 - L3 LINE CR1 -188 1389 1250 546 160 92 59 chr17 33861064 33861183 -51577297 - L2 LINE L2 0 3313 3191 574 308 99 9 chr17 33862106 33862317 -51576163 + MIR SINE MIR 20 249 -13 1838 158 16 29 chr17 33862477 33862793 -51575687 + AluSx SINE Alu 1 312 0 555 207 171 8 chr17 33863853 33864011 -51574469 + MIR SINE MIR 6 185 -61 499 293 144 6 chr17 33864310 33864491 -51573989 + MIR SINE MIR 2 207 -55 1977 172 3 0 chr17 33864617 33864925 -51573555 + AluJo SINE Alu 1 309 -3 326 331 16 33 chr17 33865006 33865127 -51573353 + MIR SINE MIR 48 166 -96 189 0 0 0 chr17 33865337 33865358 -51573122 + (T)n Simple_repeat Simple_repeat 1 21 0 2213 125 0 0 chr17 33865776 33866073 -51572407 + AluSx SINE Alu 1 297 -15 426 349 125 20 chr17 33866146 33866441 -51572039 + L1 LINE L1 4018 4343 -1803 542 202 0 10 chr17 33866611 33866710 -51571770 + L2 LINE L2 3195 3292 -21 850 167 15 0 chr17 33866715 33866847 -51571633 - FLAM_C SINE Alu -9 134 1 315 302 130 9 chr17 33867319 33867427 -51571053 + MIR SINE MIR 46 164 -44 565 232 32 74 chr17 33869162 33869352 -51569128 - MER5A DNA MER1_type 0 189 8 229 267 58 35 chr17 33870632 33870718 -51567762 + MIR SINE MIR 45 132 -76 554 299 71 16 chr17 33871866 33872050 -51566430 + MIR SINE MIR 21 214 -48 21 36 0 0 chr17 33872055 33872083 -51566397 + AT_rich Low_complexity Low_complexity 1 28 0 307 224 222 0 chr17 33874029 33874146 -51564334 + MIR SINE MIR 49 147 -61 372 316 29 15 chr17 33874842 33874978 -51563502 - MIR3 SINE MIR -49 159 22 1642 143 159 50 chr17 33875351 33875569 -51562911 - MSTB LTR MaLR -7 419 226 1954 145 30 3 chr17 33875569 33875872 -51562608 - AluJb SINE Alu -1 311 1 1642 143 159 50 chr17 33875872 33876031 -51562449 - MSTB LTR MaLR -200 226 1 8330 157 65 16 chr17 33876031 33877572 -51560908 - MSTB-int LTR MaLR 0 1651 34 2142 100 11 4 chr17 33877606 33877885 -51560595 - AluSq SINE Alu -32 281 1 269 149 21 0 chr17 33877885 33877932 -51560548 - MSTB-int LTR MaLR -1602 49 2 2599 143 52 5 chr17 33877933 33878340 -51560140 - MSTB LTR MaLR 0 426 1 367 172 75 32 chr17 33878378 33878471 -51560009 + MER103 DNA DNA 3 99 -67 367 265 139 8 chr17 33878545 33878742 -51559738 + MIR SINE MIR 4 244 -18 2317 115 0 3 chr17 33878817 33879122 -51559358 - AluSg SINE Alu -6 304 1 190 352 0 0 chr17 33879341 33879395 -51559085 + L2 LINE L2 3200 3253 -19 198 103 0 0 chr17 33879401 33879430 -51559050 + (TGAA)n Simple_repeat Simple_repeat 2 30 0 354 338 49 36 chr17 33879433 33879658 -51558822 - MIR SINE MIR -6 256 29 193 320 26 26 chr17 33879710 33879788 -51558692 - MIR SINE MIR -167 95 18 753 307 40 9 chr17 33880234 33880459 -51558021 + MIR SINE MIR 12 243 -19 337 207 12 24 chr17 33880613 33880695 -51557785 + MIR SINE MIR 73 153 -109 2318 282 139 29 chr17 33880754 33881990 -51556490 + L2 LINE L2 1786 3179 -134 243 0 0 0 chr17 33881990 33882017 -51556463 + (TG)n Simple_repeat Simple_repeat 1 27 0 2318 282 139 29 chr17 33882017 33882165 -51556315 + L2 LINE L2 3179 3309 -4 397 315 8 8 chr17 33882153 33882280 -51556200 + MIR SINE MIR 134 260 -2 * 2325 118 0 0 chr17 33882850 33883156 -51555324 - AluSg SINE Alu -4 306 1 458 211 226 8 chr17 33883230 33883363 -51555117 - MIR SINE MIR -32 230 69 322 291 42 48 chr17 33883379 33883544 -51554936 + MIR SINE MIR 15 178 -84 378 0 0 0 chr17 33883598 33883640 -51554840 + (TG)n Simple_repeat Simple_repeat 2 43 0 518 278 106 0 chr17 33884060 33884211 -51554269 + MER5A DNA MER1_type 22 188 -1 499 240 8 25 chr17 33887444 33887565 -51550915 + MIR SINE MIR 102 220 -42 1192 224 113 82 chr17 33888825 33889031 -51549449 - L2 LINE L2 -1 3312 3114 2556 66 7 0 chr17 33889031 33889336 -51549144 + AluSp SINE Alu 1 307 -6 1192 224 113 82 chr17 33889336 33889384 -51549096 - L2 LINE L2 -199 3114 3069 2241 116 0 22 chr17 33889384 33889703 -51548777 - AluSx SINE Alu 0 312 1 1192 224 113 82 chr17 33889703 33890303 -51548177 - L2 LINE L2 -244 3069 2434 1935 154 26 3 chr17 33890329 33890634 -51547846 + AluJo SINE Alu 1 312 0 1341 154 75 161 chr17 33890821 33891098 -51547382 - MSTB LTR MaLR 0 426 204 7697 32 0 0 chr17 33891098 33892492 -51545988 - L1PA5 LINE L1 -6 6148 4754 1341 154 75 161 chr17 33892492 33892680 -51545800 - MSTB LTR MaLR -222 204 1 502 260 54 78 chr17 33892675 33892917 -51545563 - L2 LINE L2 -3 3310 3075 * 1604 204 124 32 chr17 33893067 33893528 -51544952 - MLT1D LTR MaLR -2 503 1 681 190 190 32 chr17 33893869 33894090 -51544390 + MIR SINE MIR 5 260 -2 514 250 61 15 chr17 33894144 33894276 -51544204 + L2 LINE L2 3176 3313 0 361 299 118 84 chr17 33894852 33895173 -51543307 - L2 LINE L2 -6 3266 2935 2206 103 0 50 chr17 33896084 33896403 -51542077 + AluSx SINE Alu 1 303 -9 236 121 0 0 chr17 33896681 33896714 -51541766 + Alu SINE Alu 2 34 -274 956 169 0 42 chr17 33896714 33896880 -51541600 + AluSg/x SINE Alu 126 284 -26 357 292 0 26 chr17 33896938 33897051 -51541429 + MIR SINE MIR 88 197 -65 469 297 51 0 chr17 33897330 33897468 -51541012 + L2 LINE L2 3167 3311 -2 2366 87 13 0 chr17 33897763 33898061 -51540419 - AluSx SINE Alu -10 302 1 2530 64 0 0 chr17 33898586 33898881 -51539599 - AluY SINE Alu -16 295 1 272 250 38 25 chr17 33899265 33899345 -51539135 + L2 LINE L2 3191 3271 -1 285 341 49 16 chr17 33899814 33899937 -51538543 + L2 LINE L2 3140 3266 -6 337 289 156 16 chr17 33899954 33900082 -51538398 - L2 LINE L2 -6 3266 3121 2344 96 0 0 chr17 33901647 33901969 -51536511 + AluSx SINE Alu 1 322 0 2311 99 3 0 chr17 33902367 33902704 -51535776 + AluSx SINE Alu 1 338 0 346 260 47 60 chr17 33903188 33903338 -51535142 + MIR SINE MIR 2 149 -113 1043 170 55 89 chr17 33903495 33903766 -51534714 + MIR SINE MIR 1 262 0 2251 115 3 0 chr17 33904133 33904429 -51534051 + AluSx SINE Alu 1 297 -15 344 324 37 32 chr17 33904805 33905089 -51533391 + L3 LINE CR1 670 1026 -551 1963 157 6 10 chr17 33905146 33905459 -51533021 - AluJb SINE Alu 0 312 1 1035 124 0 0 chr17 33905463 33905600 -51532880 - AluJb SINE Alu -175 137 1 468 278 335 8 chr17 33905600 33905970 -51532510 + L3 LINE CR1 1086 1576 -1 572 228 0 0 chr17 33906116 33906217 -51532263 + FRAM SINE Alu 1 101 -75 478 183 150 113 chr17 34006218 34006345 -51432135 + MER2 DNA MER2_type 125 265 -80 1667 183 14 3 chr17 34006345 34006629 -51431851 - AluJo SINE Alu -25 287 1 478 183 150 113 chr17 34006629 34006714 -51431766 + MER2 DNA MER2_type 265 345 0 1898 171 97 40 chr17 34008001 34008476 -51430004 - MLT1D LTR MaLR 0 505 4 1059 138 24 48 chr17 34008646 34008856 -51429624 + MER3 DNA MER1_type 5 209 0 14368 189 31 20 chr17 34009105 34011908 -51426572 - L1P4 LINE L1 -532 6337 3491 2191 59 17 35 chr17 34011908 34012235 -51426245 - AluY SINE Alu 0 322 1 14368 189 31 20 chr17 34012235 34013117 -51425363 - L1P4 LINE L1 -3378 3491 2620 2064 164 3 0 chr17 34013331 34013648 -51424832 + 7SLRNA srpRNA srpRNA 3 320 0 288 164 75 0 chr17 34013672 34013739 -51424741 - MIR SINE MIR -84 178 107 465 241 22 50 chr17 34014321 34014565 -51423915 + MER41B LTR ERV1 53 430 -205 1697 100 32 17 chr17 34014673 34015019 -51423461 + MLT2A1 LTR ERVL 1 444 0 6974 119 17 35 chr17 34015019 34016393 -51422087 + HERVL-A1 LTR ERVL 1 1352 -4412 * 16677 58 18 0 chr17 34016391 34018407 -51420073 + HERVL-A1 LTR ERVL 2491 4542 -1112 210 269 154 0 chr17 34018757 34018835 -51419645 - MIR SINE MIR -65 197 108 294 338 100 6 chr17 34018847 34019007 -51419473 - MIR SINE MIR -25 237 63 319 224 24 0 chr17 34019137 34019222 -51419258 + MIR SINE MIR 90 176 -86 232 312 18 9 chr17 34019892 34020001 -51418479 - L3 LINE CR1 -176 1401 1292 340 301 121 12 chr17 34020671 34020837 -51417643 - MIR3 SINE MIR -9 199 16 524 281 68 36 chr17 34021749 34021970 -51416510 - MIR SINE MIR -15 247 20 1560 196 11 4 chr17 34022254 34022569 -51415911 + AluJb SINE Alu 1 317 0 6682 79 3 18 chr17 34022904 34024367 -51414113 + L1PA15 LINE L1 4728 6162 -3 246 320 22 90 chr17 34025418 34025596 -51412884 + L2 LINE L2 3028 3193 -79 238 242 158 11 chr17 34026158 34026253 -51412227 - MIR SINE MIR -70 138 30 206 306 0 0 chr17 34026954 34027016 -51411464 - L2 LINE L2 -8 3305 3244 2274 114 0 3 chr17 34027102 34027400 -51411080 + AluSx SINE Alu 1 297 -15 232 202 60 12 chr17 34027414 34027498 -51410982 - L1ME4a LINE L1 -4 6117 6030 280 254 31 46 chr17 34027605 34027735 -51410745 - L1ME4a LINE L1 -279 5842 5715 710 306 18 4 chr17 34027867 34028096 -51410384 - MIR SINE MIR 0 262 31 2208 98 3 46 chr17 34028271 34028597 -51409883 + AluSx SINE Alu 1 312 0 1877 139 0 21 chr17 34029014 34029301 -51409179 + AluSx SINE Alu 1 281 -31 1392 56 0 0 chr17 34029308 34029486 -51408994 + (GAAA)n Simple_repeat Simple_repeat 2 179 0 510 110 40 10 chr17 34029488 34029588 -51408892 + GA-rich Low_complexity Low_complexity 3 105 0 252 359 60 10 chr17 34029595 34029893 -51408587 - L2 LINE L2 -650 2664 2352 828 71 47 24 chr17 34030557 34030726 -51407754 + CT-rich Low_complexity Low_complexity 2 174 0 2035 114 28 3 chr17 34030828 34031117 -51407363 - AluSx SINE Alu -12 300 5 243 61 0 0 chr17 34031196 34031229 -51407251 + (TG)n Simple_repeat Simple_repeat 2 34 0 1090 112 0 0 chr17 34031229 34031381 -51407099 - L1PA13 LINE L1 -15 6148 5997 280 322 11 0 chr17 34031468 34031558 -51406922 - L2 LINE L2 0 3272 3182 612 311 40 9 chr17 34032071 34032293 -51406187 + MIR SINE MIR 33 261 -1 226 223 29 39 chr17 34033805 34033908 -51404572 - L1ME4a LINE L1 -40 6081 5980 341 165 0 13 chr17 34033948 34034027 -51404453 + (TA)n Simple_repeat Simple_repeat 2 79 0 25 65 0 0 chr17 34036545 34036591 -51401889 + AT_rich Low_complexity Low_complexity 1 46 0 461 330 20 25 chr17 34037133 34037336 -51401144 - MIR SINE MIR -48 214 13 225 250 52 31 chr17 34037476 34037572 -51400908 + MER5B DNA MER1_type 81 178 0 395 254 88 123 chr17 34038014 34038504 -51399976 + L1ME4a LINE L1 5606 6081 -40 198 0 0 0 chr17 34038723 34038745 -51399735 + (TC)n Simple_repeat Simple_repeat 1 22 0 * 411 21 0 0 chr17 34038744 34038792 -51399688 + (CA)n Simple_repeat Simple_repeat 1 48 0 2231 101 3 3 chr17 34039507 34039804 -51398676 - AluSg SINE Alu -13 297 1 594 194 103 24 chr17 34040289 34040454 -51398026 + MER5A DNA MER1_type 11 188 -1 583 265 75 46 chr17 34041730 34042036 -51396444 - L1ME4a LINE L1 -225 5896 5582 414 336 0 0 chr17 34044746 34044883 -51393597 - MIR SINE MIR -77 185 49 229 35 0 0 chr17 34045034 34045063 -51393417 + (TTTG)n Simple_repeat Simple_repeat 4 172 0 2051 129 3 0 chr17 34045063 34045350 -51393130 - AluSx SINE Alu -1 316 1 772 296 9 0 chr17 34045543 34045763 -51392717 + MER58A DNA MER1_type 3 224 0 344 316 97 45 chr17 34045954 34046062 -51392418 + L1MC4a LINE L1 5563 5664 -2144 2052 131 3 0 chr17 34046062 34046352 -51392128 + AluSx SINE Alu 1 291 -21 344 316 97 45 chr17 34046352 34046531 -51391949 + L1MC4a LINE L1 5664 5865 -1943 240 59 0 0 chr17 34047060 34047094 -51391386 + (CA)n Simple_repeat Simple_repeat 2 35 0 357 252 89 16 chr17 34047539 34047750 -51390730 + MLT1J2 LTR MaLR 63 330 -120 748 245 27 0 chr17 34047756 34047940 -51390540 + MER5A DNA MER1_type 1 189 0 877 203 6 28 chr17 34048367 34048544 -51389936 + AluJo SINE Alu 2 174 -138 317 365 54 0 chr17 34048794 34048942 -51389538 - MER91A DNA MER1_type -2 194 39 410 250 0 10 chr17 34049031 34049127 -51389353 + MER94 DNA DNA 40 134 0 2226 101 3 0 chr17 34049664 34049974 -51388506 + AluSq SINE Alu 1 311 0 495 284 82 103 chr17 34050374 34050410 -51388070 + MLT1K LTR MaLR 182 217 -371 1311 197 27 104 chr17 34050410 34050775 -51387705 - MER58B DNA MER1_type -4 337 1 495 284 82 103 chr17 34050775 34051154 -51387326 + MLT1K LTR MaLR 217 588 0 2283 131 39 152 chr17 34051672 34052258 -51386222 - MLT2B1 LTR ERVL 0 520 1 776 198 12 12 chr17 34052612 34052784 -51385696 + MER5B DNA MER1_type 1 172 -6 620 154 231 19 chr17 34052915 34053071 -51385409 - MER53 DNA DNA 0 189 1 1016 74 27 20 chr17 34055460 34055609 -51382871 - L1PA13 LINE L1 0 6163 6014 1502 166 63 46 chr17 34055907 34056191 -51382289 + AluJo SINE Alu 1 289 -23 372 307 27 27 chr17 34056234 34056384 -51382096 - MLT1L LTR MaLR -124 491 342 1968 182 17 14 chr17 34056893 34057240 -51381240 - MER7A DNA MER2_type 0 346 1 377 303 43 19 chr17 34057341 34057360 -51381120 - L1ME LINE L1 -373 5748 5731 2199 135 0 0 chr17 34057360 34057657 -51380823 - AluSx SINE Alu -15 297 1 377 303 43 19 chr17 34057657 34057799 -51380681 - L1ME LINE L1 -390 5731 5583 411 316 51 0 chr17 34059639 34059835 -51378645 + L1MEc LINE L1 1597 1802 -4594 633 260 43 25 chr17 34061144 34061379 -51377101 - L1ME LINE L1 -983 5163 4925 1211 206 97 77 chr17 34061408 34061811 -51376669 - MLT2B1 LTR ERVL 0 520 110 230 270 40 0 chr17 34061818 34061892 -51376588 - L1ME LINE L1 -1312 4834 4758 1821 278 55 48 chr17 34061893 34062030 -51376450 - HERV16 LTR ERVL -2077 2919 2784 2444 97 3 0 chr17 34062030 34062341 -51376139 - AluSp SINE Alu -1 312 1 1821 278 55 48 chr17 34062341 34062916 -51375564 - HERV16 LTR ERVL -2212 2784 2202 1782 287 37 61 chr17 34062914 34063664 -51374816 - HERV16 LTR ERVL -3444 1552 821 * 225 316 44 37 chr17 34063696 34063832 -51374648 + L1ME1 LINE L1 3507 3643 -2572 426 235 25 0 chr17 34063833 34063952 -51374528 + L1ME1 LINE L1 4957 5078 -1137 559 209 0 0 chr17 34064051 34064161 -51374319 + AluSg/x SINE Alu 198 307 -3 1040 229 33 33 chr17 34064164 34064496 -51373984 + L1ME1 LINE L1 5119 5450 -765 1519 204 152 18 chr17 34064556 34064998 -51373482 + MLT1D LTR MaLR 1 501 -4 913 277 127 3 chr17 34065036 34065343 -51373137 + MLT1H1 LTR MaLR 10 354 -201 2464 89 0 0 chr17 34065656 34065960 -51372520 - AluSc SINE Alu -5 304 1 1569 203 33 3 chr17 34068358 34068659 -51369821 + AluJb SINE Alu 1 310 -2 412 267 111 6 chr17 34068691 34068871 -51369609 - MIR SINE MIR -49 213 15 427 163 0 25 chr17 34069307 34069387 -51369093 - AluJb SINE Alu -75 237 160 376 192 8 108 chr17 34070093 34070213 -51368267 + L1ME1 LINE L1 5758 5865 -446 187 104 42 0 chr17 34070233 34070281 -51368199 + (TG)n Simple_repeat Simple_repeat 1 50 0 2119 121 0 0 chr17 34070282 34070563 -51367917 - AluSg SINE Alu -29 281 1 1711 152 3 14 chr17 34070711 34071007 -51367473 - L1PB4 LINE L1 -3 6153 5861 1361 261 71 25 chr17 34071117 34072011 -51366469 - L1PBb LINE L1 -4798 1405 372 357 264 48 32 chr17 34072248 34072373 -51366107 - L1PBb LINE L1 -5957 247 121 24 67 0 0 chr17 34073046 34073091 -51365389 + AT_rich Low_complexity Low_complexity 1 45 0 1603 190 34 39 chr17 34073112 34073173 -51365307 + L1ME1 LINE L1 5848 5908 -327 2696 159 5 2 chr17 34073173 34073600 -51364880 + MSTA LTR MaLR 1 428 0 1603 190 34 39 chr17 34073600 34073923 -51364557 + L1ME1 LINE L1 5908 6230 -5 369 0 0 0 chr17 34073946 34073987 -51364493 + (CA)n Simple_repeat Simple_repeat 2 42 0 359 307 6 42 chr17 34074068 34074234 -51364246 + L1MCc LINE L1 293 452 -5971 913 289 108 48 chr17 34074798 34075738 -51362742 + L1MCc LINE L1 1171 2435 -4687 1645 189 31 3 chr17 34075738 34076029 -51362451 + AluJo SINE Alu 1 299 -13 913 289 108 48 chr17 34076029 34076355 -51362125 + L1MCc LINE L1 2435 2740 -4382 1130 254 4 34 chr17 34076421 34076769 -51361711 + L1ME2 LINE L1 5815 6155 -9 3247 222 74 32 chr17 34076810 34076985 -51361495 + L1MCc LINE L1 2905 3071 -3870 2486 90 0 0 chr17 34076985 34077296 -51361184 + AluY SINE Alu 1 311 0 3247 222 74 32 chr17 34077296 34078205 -51360275 + L1MCc LINE L1 3071 4034 -2907 2443 35 11 7 chr17 34078566 34078851 -51359629 + AluY SINE Alu 1 286 -25 411 21 0 0 chr17 34078858 34078906 -51359574 + (CAT)n Simple_repeat Simple_repeat 2 49 0 249 197 0 0 chr17 34079514 34079575 -51358905 + CT-rich Low_complexity Low_complexity 4 64 0 798 277 113 27 chr17 34079638 34080046 -51358434 + L1ME3A LINE L1 5497 5939 -231 1817 155 3 10 chr17 34080046 34080337 -51358143 + AluJb SINE Alu 1 289 -23 648 119 45 0 chr17 34080559 34080785 -51357695 + (TA)n Simple_repeat Simple_repeat 1 236 0 2263 108 3 7 chr17 34080797 34081102 -51357378 + AluSq SINE Alu 1 304 -9 2454 71 3 0 chr17 34081105 34081399 -51357081 + AluSp SINE Alu 1 295 -18 209 260 164 0 chr17 34081924 34081997 -51356483 + L2 LINE L2 3229 3313 0 2589 56 0 3 chr17 34082387 34082691 -51355789 - AluY SINE Alu -8 303 1 209 286 99 22 chr17 34082716 34082807 -51355673 + L3 LINE CR1 284 381 -1196 1730 130 52 0 chr17 34082917 34083187 -51355293 - MER7A DNA MER2_type 0 346 65 688 174 43 0 chr17 34083237 34083352 -51355128 + Tigger3(Golem) DNA MER2_type 2904 3023 -6 304 231 0 0 chr17 34083345 34083397 -51355083 - Tigger3(Golem) DNA MER2_type -2976 53 2 * 2246 111 0 0 chr17 34083764 34084052 -51354428 + AluSx SINE Alu 1 288 -24 505 209 0 115 chr17 34084061 34084243 -51354237 + L1MD3 LINE L1 7825 7985 -10 1984 159 0 7 chr17 34084453 34084761 -51353719 + AluJb SINE Alu 3 308 -4 666 269 5 30 chr17 34084915 34085112 -51353368 + MIR SINE MIR 67 258 -4 267 254 111 24 chr17 34085121 34085247 -51353233 - MIR SINE MIR -52 210 74 180 345 92 23 chr17 34085271 34085445 -51353035 + MIR SINE MIR 28 213 -49 2588 169 65 27 chr17 34085452 34085972 -51352508 - MER34 LTR ERV1 -2 540 1 556 275 121 54 chr17 34087825 34088196 -51350284 - L2 LINE L2 -45 3268 2873 605 299 104 0 chr17 34088232 34088463 -51350017 - L2 LINE L2 -561 2753 2499 3162 134 18 21 chr17 34089040 34089553 -51348927 - LTR10D LTR ERV1 -2 511 1 402 326 210 12 chr17 34089980 34090308 -51348172 + L2 LINE L2 2920 3312 -1 919 130 0 32 chr17 34090309 34090494 -51347986 + (TGGA)n Simple_repeat Simple_repeat 2 180 0 987 201 4 46 chr17 34090514 34090753 -51347727 + MER96B DNA MER1_type? 186 414 -3 516 218 177 14 chr17 34091362 34091509 -51346971 - MER45A DNA AcHobo -7 171 1 3134 152 11 9 chr17 34092422 34092947 -51345533 + L1MD1 LINE L1 5628 6153 -89 2403 134 8 138 chr17 34092947 34093373 -51345107 - MER65C LTR ERV1 0 461 116 2349 97 7 0 chr17 34093373 34093681 -51344799 - AluSg SINE Alu 0 310 1 2403 134 8 138 chr17 34093681 34093783 -51344697 - MER65C LTR ERV1 -345 116 2 629 70 0 60 chr17 34093783 34093883 -51344597 + L1MD1 LINE L1 6149 6242 0 435 299 16 57 chr17 34094001 34094195 -51344285 + MIR SINE MIR 47 232 -30 1630 174 10 24 chr17 34094534 34094827 -51343653 + AluJb SINE Alu 1 289 -23 458 225 28 94 chr17 34094934 34095176 -51343304 - MLT1H LTR MaLR -2 547 241 1410 102 0 0 chr17 34095789 34095975 -51342505 + L1P3 LINE L1 8 193 -6268 843 216 47 28 chr17 34095975 34096188 -51342292 + LTR3 LTR ERVK 211 427 -5 22009 106 15 29 chr17 34096197 34100360 -51338120 + L1P3 LINE L1 191 4393 -2068 2044 226 75 47 chr17 34100708 34101305 -51337175 + MER21B LTR ERV1 98 711 -152 466 245 0 9 chr17 34101349 34101455 -51337025 - L2 LINE L2 -757 2557 2453 188 274 154 60 chr17 34102505 34102622 -51335858 - MIR3 SINE MIR 0 208 81 382 229 18 55 chr17 34102639 34102748 -51335732 - MIR SINE MIR -5 257 153 432 262 29 0 chr17 34102819 34102922 -51335558 - MIR SINE MIR -105 157 52 274 181 60 15 chr17 34103172 34103305 -51335175 + (TTATA)n Simple_repeat Simple_repeat 3 141 0 21 0 0 0 chr17 34103309 34103330 -51335150 + AT_rich Low_complexity Low_complexity 1 21 0 3671 83 14 2 chr17 34103345 34103836 -51334644 + L1PA8 LINE L1 5667 6163 -9 56 71 0 0 chr17 34103836 34103948 -51334532 + AT_rich Low_complexity Low_complexity 1 112 0 2137 96 0 23 chr17 34103948 34104251 -51334229 - AluSx SINE Alu -16 296 1 427 214 0 0 chr17 34104377 34104461 -51334019 - MER46C DNA MER2_type 0 338 255 2492 164 36 95 chr17 34104462 34105064 -51333416 + L1MB3 LINE L1 5616 6182 -1 539 297 81 5 chr17 34105103 34105312 -51333168 - MER46C DNA MER2_type -110 228 4 656 172 55 0 chr17 34106946 34107074 -51331406 - AluJb SINE Alu -21 291 157 543 261 55 20 chr17 34107088 34107415 -51331065 - LTR46 LTR ERV1 -30 430 1 2468 171 125 63 chr17 34107415 34108157 -51330323 - LTR1B LTR ERV1 -6 779 1 2534 147 29 10 chr17 34108157 34108573 -51329907 - HUERS-P2 LTR ERV1 0 3088 2665 15718 163 39 17 chr17 34108573 34111311 -51327169 - HUERS-P2 LTR ERV1 -287 2801 2 2778 163 98 141 chr17 34111312 34112175 -51326305 - LTR1B LTR ERV1 0 826 1 226 204 0 56 chr17 34112176 34112212 -51326268 - AluSc SINE Alu -132 167 133 834 168 0 0 chr17 34112212 34112343 -51326137 - AluJo/FLAM SINE Alu -171 131 1 226 204 0 56 chr17 34112343 34112360 -51326120 - AluSc SINE Alu -166 133 117 1151 189 55 108 chr17 34112423 34112869 -51325611 - LTR37B LTR ERV1 -2 466 45 2319 90 0 0 chr17 34112869 34113170 -51325310 - AluSg SINE Alu -7 303 3 1151 189 55 108 chr17 34113170 34113194 -51325286 - LTR37B LTR ERV1 -423 45 21 3826 169 33 21 chr17 34113213 34113378 -51325102 - MER50 LTR ERV1 -1 733 572 1893 145 27 0 chr17 34113378 34113675 -51324805 + AluSx SINE Alu 1 305 -7 3826 169 33 21 chr17 34113675 34114233 -51324247 - MER50 LTR ERV1 -162 572 1 22 88 0 0 chr17 34114294 34114351 -51324129 + AT_rich Low_complexity Low_complexity 1 57 0 966 163 11 6 chr17 34114691 34114869 -51323611 + FRAM SINE Alu 1 176 0 2396 149 29 0 chr17 34114976 34115359 -51323121 + MER57A LTR ERV1 1 394 -9 3202 145 78 22 chr17 34115463 34116049 -51322431 + LTR8A LTR ERV1 1 619 -108 281 170 0 0 chr17 34116127 34116174 -51322306 + L1MB1 LINE L1 6104 6150 -18 1374 163 100 7 chr17 34116179 34116449 -51322031 - AluJo SINE Alu -17 295 1 252 0 0 0 chr17 34116468 34116496 -51321984 + (CA)n Simple_repeat Simple_repeat 1 28 0 202 368 23 0 chr17 34116885 34116972 -51321508 - L2 LINE L2 -491 2823 2735 1790 104 8 8 chr17 34117192 34117452 -51321028 + AluSq SINE Alu 38 297 -16 2483 143 16 3 chr17 34117464 34118070 -51320410 + MER50 LTR ERV1 7 711 -23 204 239 110 46 chr17 34118893 34119002 -51319478 - MIR3 SINE MIR -7 201 86 1702 216 54 62 chr17 34119019 34119519 -51318961 - MER74B LTR ERVL -16 606 111 2076 108 3 7 chr17 34119520 34119826 -51318654 - AluSx SINE Alu -7 305 1 2472 53 0 0 chr17 34119836 34120136 -51318344 - AluY SINE Alu -11 300 1 694 269 71 18 chr17 34120159 34120245 -51318235 - MER46C DNA MER2_type 0 338 258 1748 157 10 3 chr17 34120245 34120544 -51317936 + AluJo SINE Alu 2 302 -10 694 269 71 18 chr17 34120544 34120739 -51317741 - MER46C DNA MER2_type -80 258 42 262 188 35 47 chr17 34122356 34122441 -51316039 - HAL1b LINE L1 -236 1112 1029 261 0 0 0 chr17 34122814 34122843 -51315637 + (TAA)n Simple_repeat Simple_repeat 2 30 0 1418 138 9 0 chr17 34123194 34123412 -51315068 - AluSq SINE Alu -93 220 1 319 223 107 18 chr17 34123416 34123528 -51314952 + LTR67 LTR ERVL 434 555 -2 418 286 55 29 chr17 34123535 34123773 -51314707 - HAL1 LINE L1 -840 1667 1424 5734 105 24 3 chr17 34123780 34125517 -51312963 - L1PA16 LINE L1 0 6166 4390 234 0 0 0 chr17 34125517 34125543 -51312937 + (TG)n Simple_repeat Simple_repeat 1 26 0 5734 105 24 3 chr17 34125543 34125704 -51312776 - L1PA16 LINE L1 -1776 4390 4234 2104 130 0 0 chr17 34126119 34126427 -51312053 - AluSx SINE Alu -4 308 1 1664 147 10 23 chr17 34126599 34126899 -51311581 - AluJb SINE Alu -15 297 2 2020 123 0 0 chr17 34127296 34127589 -51310891 - AluSx SINE Alu -9 303 11 265 302 112 22 chr17 34127712 34127891 -51310589 + L2 LINE L2 2888 3082 -190 294 258 54 32 chr17 34127917 34128010 -51310470 - L2 LINE L2 0 3313 3219 2285 98 0 0 chr17 34128043 34128350 -51310130 + AluSx SINE Alu 1 307 -5 810 186 13 6 chr17 34128595 34128751 -51309729 - MER5A DNA MER1_type -1 188 32 1897 139 0 26 chr17 34129049 34129358 -51309122 + AluJb SINE Alu 1 301 -11 1863 95 95 0 chr17 34129424 34129697 -51308783 + AluSq SINE Alu 1 299 -14 1609 244 6 72 chr17 34129909 34130115 -51308365 + L1MC4 LINE L1 6444 6662 -1380 1851 139 23 0 chr17 34130115 34130417 -51308063 + AluSx SINE Alu 1 309 -3 1609 244 6 72 chr17 34130417 34130723 -51307757 + L1MC4 LINE L1 6662 6922 -1120 452 266 0 0 chr17 34130795 34130908 -51307572 + HAL1 LINE L1 1574 1686 -821 21 0 0 0 chr17 34130958 34130979 -51307501 + AT_rich Low_complexity Low_complexity 1 21 0 968 254 122 32 chr17 34131176 34131586 -51306894 + MLT1J2 LTR MaLR 1 447 -3 235 277 89 27 chr17 34132094 34132206 -51306274 + MIR SINE MIR 22 140 -68 378 261 255 0 chr17 34132227 34132380 -51306100 - MER117 DNA MER1_type -5 192 1 458 296 251 15 chr17 34132551 34132750 -51305730 + MIR SINE MIR 5 250 -12 211 293 132 0 chr17 34134892 34134998 -51303482 - MIR3 SINE MIR -52 156 37 237 289 13 40 chr17 34136838 34136914 -51301566 + L2 LINE L2 3178 3251 -21 207 0 0 0 chr17 34136914 34136937 -51301543 + (TGGA)n Simple_repeat Simple_repeat 4 26 0 687 163 0 0 chr17 34136956 34137103 -51301377 + GA-rich Low_complexity Low_complexity 2 148 0 629 289 138 26 chr17 34137346 34137651 -51300829 + L2 LINE L2 2 340 -2974 333 281 193 6 chr17 34138172 34138343 -51300137 + MIR SINE MIR 5 207 -55 180 77 0 0 chr17 34139432 34139458 -51299022 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 2231 95 7 0 chr17 34139461 34139765 -51298715 - AluSq SINE Alu -7 306 1 715 269 34 34 chr17 34140320 34140554 -51297926 - MIR SINE MIR 0 262 29 402 333 47 85 chr17 34140683 34140863 -51297617 + L2 LINE L2 2805 2990 -282 2212 82 24 0 chr17 34140863 34141155 -51297325 - AluSx SINE Alu -13 299 1 402 333 47 85 chr17 34141155 34141446 -51297034 + L2 LINE L2 2990 3258 -14 226 289 48 12 chr17 34141958 34142041 -51296439 + MIR SINE MIR 2 87 -175 1899 126 0 49 chr17 34142646 34142971 -51295509 - AluJb SINE Alu -3 309 1 186 227 0 0 chr17 34143336 34143380 -51295100 + GA-rich Low_complexity Low_complexity 1 44 0 2445 36 3 7 chr17 34143901 34144206 -51294274 + AluY SINE Alu 1 304 -7 1915 116 20 14 chr17 34144492 34144784 -51293696 + AluSx SINE Alu 1 294 -18 1585 132 45 42 chr17 34144894 34145182 -51293298 + AluJb SINE Alu 1 289 -23 270 0 0 0 chr17 34145183 34145213 -51293267 + (TG)n Simple_repeat Simple_repeat 2 31 0 1473 177 0 62 chr17 34145226 34145531 -51292949 + AluJb SINE Alu 1 286 -26 348 235 0 0 chr17 34145534 34145602 -51292878 + L1MC4 LINE L1 6636 6703 -1339 2149 161 38 17 chr17 34145602 34146019 -51292461 - L1MB3 LINE L1 -19 6164 5739 189 0 0 0 chr17 34146582 34146603 -51291877 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 1086 144 0 44 chr17 34147312 34147493 -51290987 + FAM SINE Alu 1 173 -2 543 222 169 5 chr17 34147509 34147698 -51290782 + MIR SINE MIR 27 246 -16 261 308 11 0 chr17 34147766 34147857 -51290623 - MIR SINE MIR -64 144 53 271 164 164 0 chr17 34148120 34148187 -51290293 + MIR SINE MIR 103 180 -82 2253 108 3 0 chr17 34148539 34148835 -51289645 + AluSx SINE Alu 1 297 -15 222 303 0 0 chr17 34148861 34148927 -51289553 + MIR SINE MIR 170 235 -27 2282 102 3 10 chr17 34149188 34149492 -51288988 + AluSp SINE Alu 1 302 -11 405 141 244 0 chr17 34149770 34149848 -51288632 + AluSp/q SINE Alu 206 302 -1 644 223 43 0 chr17 34149885 34150024 -51288456 - MER105 DNA DNA -16 188 44 1884 104 0 41 chr17 34150678 34150946 -51287534 + AluSx SINE Alu 37 293 -19 1254 177 19 144 chr17 34151223 34151359 -51287121 + AluYb8 SINE Alu 1 152 -235 2372 91 0 16 chr17 34151359 34151666 -51286814 + AluSc SINE Alu 1 302 -7 1254 177 19 144 chr17 34151666 34151961 -51286519 + AluYb8 SINE Alu 152 387 0 2535 55 0 0 chr17 34152194 34152485 -51285995 - AluY SINE Alu -20 291 1 252 263 0 50 chr17 34152495 34152575 -51285905 + MIR3 SINE MIR 130 205 -3 779 227 49 16 chr17 34152757 34152942 -51285538 + MER58C DNA MER1_type 15 205 -10 21 36 0 0 chr17 34153072 34153100 -51285380 + AT_rich Low_complexity Low_complexity 1 28 0 2088 141 7 0 chr17 34153100 34153406 -51285074 + AluSg SINE Alu 1 308 -2 2501 72 0 22 chr17 34154966 34155284 -51283196 - AluY SINE Alu 0 311 1 2838 170 16 33 chr17 34155763 34156340 -51282140 - L1MB8 LINE L1 -1 6177 5611 188 320 115 0 chr17 34156707 34156785 -51281695 - MIR3 SINE MIR -15 193 107 1932 117 0 68 chr17 34156795 34156954 -51281526 - AluSx SINE Alu -26 286 156 2438 63 0 10 chr17 34156954 34157255 -51281225 - AluY SINE Alu -13 298 1 1932 117 0 68 chr17 34157255 34157402 -51281078 - AluSx SINE Alu -156 156 1 896 239 159 25 chr17 34157534 34158057 -51280423 - HAL1 LINE L1 -3 2504 1912 1294 94 64 44 chr17 34158091 34158294 -51280186 - AluSc SINE Alu -2 307 101 1585 254 80 13 chr17 34158406 34158728 -51279752 - HAL1 LINE L1 -755 1752 1453 2589 44 0 19 chr17 34158728 34159045 -51279435 - AluY SINE Alu 0 311 1 1585 254 80 13 chr17 34159045 34159230 -51279250 - HAL1 LINE L1 -1054 1453 1205 1660 133 4 0 chr17 34159230 34159463 -51279017 + AluSq SINE Alu 1 234 -79 1585 254 80 13 chr17 34159463 34159489 -51278991 - HAL1 LINE L1 -1302 1205 1182 371 267 80 27 chr17 34159588 34159738 -51278742 - MIR SINE MIR -57 205 48 766 229 24 0 chr17 34159745 34159911 -51278569 - MIR SINE MIR -91 171 2 283 67 22 0 chr17 34160729 34160774 -51277706 + L2 LINE L2 3191 3236 -36 697 187 18 164 chr17 34160952 34161177 -51277303 - MER20 DNA MER1_type -26 193 2 805 330 55 57 chr17 34161183 34161620 -51276860 + L2 LINE L2 2836 3271 -1 654 272 85 37 chr17 34162063 34162464 -51276016 + L1M4 LINE L1 4736 5155 -991 1329 159 0 44 chr17 34162470 34162697 -51275783 + AluJo SINE Alu 84 300 -12 2950 145 29 6 chr17 34162781 34163436 -51275044 + L1M2 LINE L1 5101 5768 -523 3632 132 16 33 chr17 34163453 34163931 -51274549 + L1PA15 LINE L1 5566 6033 -132 2210 124 0 9 chr17 34163931 34164246 -51274234 + AluSx SINE Alu 1 312 0 3632 132 16 33 chr17 34164246 34164375 -51274105 + L1PA15 LINE L1 6033 6163 -2 207 69 0 0 chr17 34164416 34164445 -51274035 + (TG)n Simple_repeat Simple_repeat 2 30 0 6259 116 16 27 chr17 34164673 34165248 -51273232 + Tigger1 DNA MER2_type 963 1524 -894 2331 89 0 29 chr17 34165248 34165564 -51272916 - AluY SINE Alu -4 307 1 6259 116 16 27 chr17 34165564 34165949 -51272531 + Tigger1 DNA MER2_type 1524 1912 -506 7848 137 41 41 chr17 34165949 34166748 -51271732 + L1P3 LINE L1 465 1263 -5198 186 71 0 0 chr17 34166748 34166776 -51271704 + (CAA)n Simple_repeat Simple_repeat 1 28 0 7848 137 41 41 chr17 34166776 34167640 -51270840 + L1P3 LINE L1 1263 2153 -4308 2050 117 59 0 chr17 34167640 34167930 -51270550 + AluSx SINE Alu 1 307 -5 7848 137 41 41 chr17 34167930 34168224 -51270256 + L1P3 LINE L1 2153 2446 -4015 2335 58 3 48 chr17 34168295 34168604 -51269876 - AluY SINE Alu -16 295 1 614 211 60 25 chr17 34169097 34169296 -51269184 + L1MC5 LINE L1 7453 7658 -303 247 323 110 24 chr17 34169374 34169501 -51268979 + MIR3 SINE MIR 12 149 -59 313 231 94 26 chr17 34170324 34170441 -51268039 + MIR SINE MIR 48 172 -90 1792 130 65 3 chr17 34170496 34170788 -51267692 - AluJo SINE Alu 0 312 3 2391 53 4 0 chr17 34170818 34171122 -51267358 - AluY SINE Alu 0 305 1 2284 117 3 0 chr17 34171247 34171556 -51266924 - AluSx SINE Alu 0 312 3 2115 126 3 3 chr17 34171811 34172113 -51266367 - AluSq SINE Alu -11 302 1 2458 66 7 0 chr17 34172235 34172536 -51265944 + AluSp SINE Alu 2 304 -9 551 245 33 7 chr17 34172915 34173012 -51265468 - L1MA10 LINE L1 -3 6331 6235 799 188 31 67 chr17 34173012 34173152 -51265328 - L1ME2 LINE L1 -152 6090 5980 2233 127 0 0 chr17 34173152 34173460 -51265020 - AluSx SINE Alu -4 308 1 799 188 31 67 chr17 34173460 34173623 -51264857 - L1ME2 LINE L1 -262 5980 5813 1028 94 0 0 chr17 34173632 34173770 -51264710 - L1MA2 LINE L1 0 6304 6167 636 129 0 0 chr17 34173771 34173856 -51264624 - MER75 DNA T2_type -429 85 1 798 161 164 31 chr17 34173867 34174221 -51264259 + Zaphod DNA AcHobo 583 983 -3048 1338 194 46 3 chr17 34174233 34174517 -51263963 + Zaphod DNA AcHobo 3626 3921 -110 1849 91 95 15 chr17 34174539 34174813 -51263667 + AluSx SINE Alu 1 296 -16 794 201 30 6 chr17 34174813 34174977 -51263503 + Zaphod DNA AcHobo 3839 4006 -25 334 185 87 43 chr17 34175756 34175848 -51262632 - MLT1K LTR MaLR -12 576 481 348 164 0 15 chr17 34176630 34176697 -51261783 - MER53 DNA DNA -123 66 1 5047 115 32 7 chr17 34176780 34177539 -51260941 - LTR19C LTR ERV1 -1 778 1 752 138 24 16 chr17 34177735 34177858 -51260622 - FLAM_C SINE Alu -18 125 2 1932 238 53 26 chr17 34177858 34178475 -51260005 - L1MC4 LINE L1 -447 7595 6962 5184 157 37 2 chr17 34178476 34179541 -51258939 + L1MB7 LINE L1 5077 6175 -9 958 213 46 14 chr17 34179550 34179766 -51258714 - L1MC4 LINE L1 -1053 6989 6767 557 213 147 0 chr17 34179768 34179918 -51258562 - MIR SINE MIR -71 191 20 216 97 0 0 chr17 34179920 34179951 -51258529 + (CA)n Simple_repeat Simple_repeat 2 32 0 926 114 0 8 chr17 34180242 34180374 -51258106 + FLAM_C SINE Alu 1 131 -2 339 200 70 26 chr17 34180397 34180512 -51257968 + L1MC5 LINE L1 7817 7936 -25 1093 248 124 3 chr17 34180963 34181302 -51257178 - L2 LINE L2 -4 3309 2930 2531 58 3 0 chr17 34181407 34181701 -51256779 - AluY SINE Alu -15 296 2 259 234 64 64 chr17 34181805 34181899 -51256581 + L2 LINE L2 3161 3254 -18 312 246 154 15 chr17 34182530 34182660 -51255820 - MIR SINE MIR -6 256 109 276 240 92 96 chr17 34183449 34183678 -51254802 - MLT1K LTR MaLR 0 588 361 21 0 0 0 chr17 34183901 34183922 -51254558 + AT_rich Low_complexity Low_complexity 1 21 0 2331 98 0 3 chr17 34183925 34184222 -51254258 + AluSx SINE Alu 1 296 -16 1175 115 18 6 chr17 34184228 34184393 -51254087 + AluSg SINE Alu 1 167 -143 450 114 13 13 chr17 34184393 34184472 -51254008 - LTR25 LTR ERV1 -686 108 30 994 95 0 14 chr17 34184491 34184638 -51253842 + AluSg SINE Alu 166 310 0 1964 162 3 10 chr17 34186190 34186365 -51252115 - AluSx SINE Alu -6 306 132 2397 86 0 3 chr17 34186365 34186666 -51251814 - AluSx SINE Alu -12 300 1 1964 162 3 10 chr17 34186666 34186798 -51251682 - AluSx SINE Alu -180 132 1 193 167 0 0 chr17 34187066 34187102 -51251378 + MIR3 SINE MIR 164 199 -9 2601 199 38 91 chr17 34187143 34187465 -51251015 + LTR8 LTR ERV1 1 338 -353 4530 147 53 4 chr17 34187465 34188222 -51250258 - LTR25 LTR ERV1 0 794 1 2601 199 38 91 chr17 34188222 34188628 -51249852 + LTR8 LTR ERV1 338 691 0 216 0 0 0 chr17 34188719 34188743 -51249737 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 209 266 43 64 chr17 34190101 34190195 -51248285 - MIR SINE MIR -67 141 50 1176 149 14 65 chr17 34190244 34190298 -51248182 + AluJo SINE Alu 86 141 -171 2185 139 0 0 chr17 34190298 34190608 -51247872 + AluSx SINE Alu 1 310 -2 1176 149 14 65 chr17 34190608 34190768 -51247712 + AluJo SINE Alu 141 289 -23 667 158 63 16 chr17 34190811 34190938 -51247542 - FLAM_A SINE Alu 0 133 1 2292 110 3 0 chr17 34190947 34191246 -51247234 - AluSx SINE Alu -12 300 1 2401 84 3 0 chr17 34191263 34191559 -51246921 - AluSp SINE Alu -16 297 1 212 0 36 0 chr17 34191638 34191666 -51246814 + (CAT)n Simple_repeat Simple_repeat 2 30 0 2321 105 3 6 chr17 34192568 34192881 -51245599 - AluSx SINE Alu 0 312 1 237 83 0 0 chr17 34192888 34192924 -51245556 + (T)n Simple_repeat Simple_repeat 1 36 0 191 335 39 45 chr17 34193169 34193324 -51245156 - L2 LINE L2 -1 3312 3159 2526 50 3 3 chr17 34193337 34193634 -51244846 + AluY SINE Alu 1 297 -14 2153 101 10 7 chr17 34193889 34194185 -51244295 - AluSc SINE Alu -10 299 3 2338 84 0 26 chr17 34194853 34195186 -51243294 - AluSc SINE Alu 0 309 1 1606 188 58 0 chr17 34195791 34195967 -51242513 - AluJo SINE Alu -2 310 109 192 40 0 0 chr17 34195967 34195992 -51242488 + (TTA)n Simple_repeat Simple_repeat 1 25 0 1606 188 58 0 chr17 34195992 34196108 -51242372 - AluJo SINE Alu -203 109 1 2103 123 0 23 chr17 34196364 34196666 -51241814 - AluSx SINE Alu -17 295 1 1759 116 4 0 chr17 34196668 34196909 -51241571 - AluSx SINE Alu -8 304 63 481 196 62 0 chr17 34196909 34197006 -51241474 - AluSg SINE Alu -206 104 2 2586 56 0 3 chr17 34197819 34198121 -51240359 + AluY SINE Alu 1 301 -10 377 293 76 19 chr17 34198164 34198321 -51240159 + MIR SINE MIR 97 262 0 1669 174 16 10 chr17 34199285 34199595 -51238885 + AluJo SINE Alu 1 312 0 1742 146 32 111 chr17 34200336 34200714 -51237766 + Tigger3(Golem) DNA MER2_type 1 3028 -1 2078 128 0 0 chr17 34203146 34203443 -51235037 + AluSx SINE Alu 1 297 -15 909 234 47 0 chr17 34207737 34207951 -51230529 + MIR SINE MIR 14 237 -25 990 209 38 0 chr17 34211894 34212105 -51226375 + MIR SINE MIR 13 231 -31 2359 65 0 0 chr17 34213977 34214271 -51224209 + AluY SINE Alu 1 294 -17 4581 128 49 14 chr17 34214295 34215028 -51223452 + MER4E LTR ERV1 21 779 0 743 250 44 5 chr17 34215044 34215301 -51223179 + L1M4c LINE L1 1274 1646 -4736 2044 93 74 63 chr17 34215325 34215692 -51222788 - MER4B LTR ERV1 -239 371 1 958 132 38 71 chr17 34215692 34215904 -51222576 + MER39 LTR ERV1 503 707 0 1687 179 3 0 chr17 34216080 34216365 -51222115 + AluJb SINE Alu 1 286 -26 378 0 0 0 chr17 34216370 34216412 -51222068 + (TAAA)n Simple_repeat Simple_repeat 2 43 0 1617 200 138 29 chr17 34216460 34216963 -51221517 - MER39 LTR ERV1 0 707 1 631 232 7 20 chr17 34216975 34217126 -51221354 - MLT1F LTR MaLR -6 536 388 297 253 173 0 chr17 34217152 34217227 -51221253 - MLT1F LTR MaLR -281 274 187 255 219 68 0 chr17 34217310 34217383 -51221097 - MLT1F LTR MaLR -488 79 2 462 154 26 103 chr17 34217464 34217526 -51220954 + LTR16C LTR ERVL 382 432 -59 2088 121 7 0 chr17 34217526 34217823 -51220657 + AluSx SINE Alu 1 299 -13 462 154 26 103 chr17 34217823 34217877 -51220603 + LTR16C LTR ERVL 432 489 -2 377 317 139 0 chr17 34217949 34218129 -51220351 - MIR SINE MIR -3 259 55 2324 81 0 0 chr17 34218266 34218564 -51219916 - AluSx SINE Alu -14 298 1 189 147 0 0 chr17 34218879 34218913 -51219567 + (T)n Simple_repeat Simple_repeat 1 34 0 430 304 99 6 chr17 34220502 34220663 -51217817 - MIR SINE MIR -74 188 13 463 283 133 40 chr17 34221229 34221455 -51217025 - MIR SINE MIR -12 250 4 228 258 41 21 chr17 34221800 34221897 -51216583 - L1MC4a LINE L1 -1657 6151 6053 618 275 115 45 chr17 34221973 34222094 -51216386 - L1MC4a LINE L1 -1869 5939 5828 2209 60 17 33 chr17 34222094 34222394 -51216086 - AluSc SINE Alu -14 295 1 618 275 115 45 chr17 34222394 34222654 -51215826 - L1MC4a LINE L1 -1980 5828 5531 2006 112 0 3 chr17 34222663 34222994 -51215486 + AluSq SINE Alu 1 330 0 2139 102 0 3 chr17 34223013 34223307 -51215173 - AluSx SINE Alu -19 293 1 255 281 0 0 chr17 34223447 34223511 -51214969 - MIR SINE MIR -56 152 89 213 281 26 79 chr17 34224341 34224455 -51214025 + L2 LINE L2 3203 3310 -3 212 243 14 0 chr17 34224464 34224538 -51213942 + (TGGA)n Simple_repeat Simple_repeat 4 78 0 2742 19 0 0 chr17 34224832 34225144 -51213336 + AluYb8 SINE Alu 1 312 -6 251 202 48 60 chr17 34225225 34225309 -51213171 + LTR67 LTR ERVL 428 510 -47 4132 154 58 94 chr17 34225346 34226295 -51212185 + MER21A LTR ERV1 10 924 -7 1906 156 16 0 chr17 34226353 34226660 -51211820 - AluJo SINE Alu 0 312 1 572 274 14 11 chr17 34227001 34227159 -51211321 - MIR3 SINE MIR -61 147 10 423 307 59 7 chr17 34227915 34228068 -51210412 - MIR SINE MIR -21 241 81 787 106 0 2 chr17 34228074 34228320 -51210160 + AluSx SINE Alu 2 295 -14 854 181 0 0 chr17 34228333 34228466 -51210014 + AluJo SINE Alu 1 133 -169 795 198 86 0 chr17 34228507 34228669 -51209811 + AluJo SINE Alu 129 304 -8 284 136 34 0 chr17 34229280 34229339 -51209141 + G-rich Low_complexity Low_complexity 3 63 0 22 0 0 0 chr17 34230216 34230238 -51208242 + AT_rich Low_complexity Low_complexity 1 22 0 549 96 0 0 chr17 34230329 34230402 -51208078 - 7SK RNA RNA 0 193 121 3508 164 8 70 chr17 34230425 34231159 -51207321 + LTR8 LTR ERV1 1 689 -2 663 174 0 53 chr17 34231172 34231245 -51207235 - 7SK RNA RNA -68 125 61 3503 108 134 2 chr17 34231245 34231791 -51206689 + LTR35 LTR ERV1 1 618 0 663 174 0 53 chr17 34231791 34231849 -51206631 - 7SK RNA RNA -132 61 1 2041 112 0 3 chr17 34231859 34232154 -51206326 - AluSx SINE Alu -12 300 7 2342 85 0 0 chr17 34232158 34232463 -51206017 - AluSx SINE Alu -7 305 1 1929 130 16 0 chr17 34232464 34232771 -51205709 - AluJo SINE Alu 0 312 1 247 276 17 0 chr17 34232814 34232872 -51205608 - MIR3 SINE MIR -53 155 97 1616 183 59 48 chr17 34232873 34233080 -51205400 + L1MA9 LINE L1 5858 6061 -251 1437 133 94 67 chr17 34233080 34233410 -51205070 - MER44D DNA MER2_type 0 609 1 1616 183 59 48 chr17 34233410 34233443 -51205037 + L1MA9 LINE L1 6061 6092 -220 2161 85 10 13 chr17 34233443 34233748 -51204732 - AluSx SINE Alu -8 304 1 1616 183 59 48 chr17 34233748 34233900 -51204580 + L1MA9 LINE L1 6092 6255 -57 23 33 0 0 chr17 34233909 34233939 -51204541 + AT_rich Low_complexity Low_complexity 1 30 0 234 299 65 26 chr17 34233939 34234016 -51204464 - MIR SINE MIR -178 84 5 293 273 30 97 chr17 34234183 34234348 -51204132 + L2 LINE L2 3158 3311 -2 207 305 85 0 chr17 34234544 34234603 -51203877 - MIR SINE MIR 0 262 199 1513 172 19 45 chr17 34234795 34234940 -51203540 + AluJo SINE Alu 1 148 -164 2367 68 0 0 chr17 34234940 34235235 -51203245 + AluY SINE Alu 6 300 -11 1513 172 19 45 chr17 34235235 34235397 -51203083 + AluJo SINE Alu 148 300 -12 2251 81 0 0 chr17 34235836 34236134 -51202346 + AluY SINE Alu 1 298 -13 537 297 10 67 chr17 34236274 34236483 -51201997 - MIR SINE MIR 0 262 66 2163 98 24 0 chr17 34236742 34237039 -51201441 + AluSq SINE Alu 1 304 -9 2564 39 0 0 chr17 34237071 34237376 -51201104 - AluY SINE Alu -6 305 1 393 290 120 26 chr17 34237419 34237584 -51200896 + MIR SINE MIR 13 190 -60 2628 26 0 0 chr17 34237711 34238013 -51200467 - AluY SINE Alu -9 302 1 1803 107 41 4 chr17 34238062 34238358 -51200122 + AluY SINE Alu 1 306 0 739 277 11 5 chr17 34238562 34238750 -51199730 + MIR3 SINE MIR 13 201 -7 338 194 301 10 chr17 34238797 34238900 -51199580 + MIR SINE MIR 122 254 -8 288 284 22 17 chr17 34238959 34239067 -51199413 - MIR SINE MIR -49 159 54 522 246 108 69 chr17 34240319 34240379 -51198101 - MIR SINE MIR -4 258 202 2434 52 0 7 chr17 34240379 34240686 -51197794 - AluY SINE Alu -6 305 1 522 246 108 69 chr17 34240686 34240828 -51197652 - MIR SINE MIR -60 202 48 308 198 174 0 chr17 34241219 34241305 -51197175 + MIR SINE MIR 53 153 -109 2447 68 3 0 chr17 34241727 34242036 -51196444 - AluY SINE Alu -1 310 1 344 328 109 22 chr17 34242331 34242514 -51195966 - MIR SINE MIR -1 261 63 939 174 0 23 chr17 34242638 34242810 -51195670 - AluSg/x SINE Alu -8 304 137 589 243 162 14 chr17 34243800 34244010 -51194470 + MIR SINE MIR 22 262 0 271 309 0 0 chr17 34244093 34244161 -51194319 - L2 LINE L2 0 3272 3205 408 94 0 0 chr17 34244727 34244791 -51193689 + L1MB3 LINE L1 6120 6183 0 2158 99 3 7 chr17 34245129 34245432 -51193048 + AluSq SINE Alu 3 304 -9 1678 171 10 23 chr17 34245437 34245746 -51192734 + AluJb SINE Alu 1 305 -7 2311 78 7 0 chr17 34246552 34246847 -51191633 + AluY SINE Alu 1 297 -14 2205 105 0 3 chr17 34246849 34247153 -51191327 + AluSx SINE Alu 1 303 -9 237 307 27 0 chr17 34247201 34247276 -51191204 + L2 LINE L2 3189 3265 -7 2525 48 0 6 chr17 34247816 34248129 -51190351 + AluY SINE Alu 1 311 0 1332 117 0 0 chr17 34248117 34248296 -51190184 + AluSg/x SINE Alu 121 299 -13 628 229 50 22 chr17 34249069 34249248 -51189232 - MIR SINE MIR 0 262 79 2555 65 0 3 chr17 34249269 34249579 -51188901 + AluY SINE Alu 1 309 -2 805 207 113 43 chr17 34249670 34249970 -51188510 - L1MC4 LINE L1 -3 8039 7719 218 275 0 0 chr17 34249970 34250010 -51188470 - L2 LINE L2 -112 3160 3121 218 320 47 23 chr17 34250132 34250260 -51188220 - L2 LINE L2 -225 3047 2917 954 103 13 45 chr17 34250270 34250426 -51188054 + L1PA10 LINE L1 6018 6168 0 2183 111 0 0 chr17 34250534 34250814 -51187666 + AluSx SINE Alu 1 280 -32 225 94 0 0 chr17 34250815 34250847 -51187633 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 256 250 53 13 chr17 34251025 34251101 -51187379 - MIR SINE MIR -76 132 54 418 270 132 20 chr17 34251602 34251806 -51186674 + L2 LINE L2 2854 3080 -192 432 90 149 0 chr17 34251892 34251959 -51186521 + MER5A DNA MER1_type 1 77 -112 561 132 0 0 chr17 34251960 34252036 -51186444 + AluS SINE Alu 3 78 -235 1648 110 0 0 chr17 34302036 34302245 -51136235 - AluSx SINE Alu -103 209 1 229 368 0 8 chr17 34302943 34303060 -51135420 + (TATATG)n Simple_repeat Simple_repeat 1 116 0 515 302 13 0 chr17 34303102 34303261 -51135219 + MIR SINE MIR 88 248 -14 282 244 23 23 chr17 34303353 34303439 -51135041 + L1MEc LINE L1 94 179 -6217 714 263 219 51 chr17 34303440 34303832 -51134648 - MLT1G1 LTR MaLR 0 595 138 928 206 0 0 chr17 34304891 34305051 -51133429 - AluJb SINE Alu -16 296 137 832 190 101 0 chr17 34305251 34305430 -51133050 + AluJo SINE Alu 104 300 -12 1603 161 87 3 chr17 34305742 34306028 -51132452 - AluJb SINE Alu -2 310 1 855 184 6 37 chr17 34306845 34307008 -51131472 - FRAM SINE Alu -8 168 11 2372 80 3 0 chr17 34307018 34307320 -51131160 - AluY SINE Alu -8 303 1 1811 155 13 36 chr17 34307453 34307756 -51130724 + AluJo SINE Alu 2 297 -15 275 320 35 2 chr17 34308013 34308143 -51130337 + MIR SINE MIR 39 181 -27 363 340 56 25 chr17 34308161 34308496 -51129984 + L2 LINE L2 2719 3059 -213 2525 53 6 9 chr17 34308776 34309097 -51129383 + L1PA14 LINE L1 5842 6161 0 227 303 76 53 chr17 34309114 34309246 -51129234 + L2 LINE L2 3138 3272 0 677 313 66 44 chr17 34309640 34310267 -51128213 + L2 LINE L2 2353 3063 -209 388 254 204 0 chr17 34310366 34310508 -51127972 + MIR SINE MIR 42 212 -50 233 220 142 134 chr17 34313908 34313993 -51124487 + L1MEc LINE L1 617 700 -5505 2201 86 48 0 chr17 34313993 34314285 -51124195 + AluSp SINE Alu 1 306 -7 233 220 142 134 chr17 34314285 34314524 -51123956 + L1MEc LINE L1 700 935 -5270 1934 133 34 0 chr17 34314524 34314818 -51123662 + AluSx SINE Alu 1 304 -8 233 220 142 134 chr17 34314818 34315033 -51123447 + L1MEc LINE L1 935 1167 -5038 1658 185 7 14 chr17 34315033 34315314 -51123166 + AluJb SINE Alu 4 282 -30 233 220 142 134 chr17 34315314 34315467 -51123013 + L1MEc LINE L1 1167 1317 -4888 216 122 0 0 chr17 34315658 34315699 -51122781 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 634 182 0 41 chr17 34315704 34315825 -51122655 - AluJo SINE Alu -137 175 60 1770 48 0 14 chr17 34315849 34316056 -51122424 - AluY SINE Alu -18 293 90 298 162 118 15 chr17 34316586 34316654 -51121826 - L2 LINE L2 0 3313 3239 2380 79 3 10 chr17 34319235 34319538 -51118942 + AluSp SINE Alu 1 301 -12 199 283 0 17 chr17 34320327 34320387 -51118093 + L2 LINE L2 3242 3300 -13 2530 58 0 22 chr17 34320593 34320904 -51117576 + AluY SINE Alu 1 304 -7 2394 71 0 26 chr17 34322842 34323153 -51115327 + AluY SINE Alu 1 303 -8 562 182 0 0 chr17 34323467 34323555 -51114925 - AluS SINE Alu -223 89 2 440 171 0 0 chr17 34323564 34323646 -51114834 - L1MB8 LINE L1 -211 5967 5886 2178 212 29 46 chr17 34323646 34323899 -51114581 + L1MEc LINE L1 2602 2858 -3357 2224 116 10 3 chr17 34323899 34324201 -51114279 + AluSx SINE Alu 3 306 -6 2398 88 10 0 chr17 34324201 34324496 -51113984 + AluSx SINE Alu 1 299 -13 2178 212 29 46 chr17 34324496 34324855 -51113625 + L1MEc LINE L1 2856 3205 -3010 370 255 75 38 chr17 34324859 34324965 -51113515 + MIR3 SINE MIR 82 191 -17 208 337 0 10 chr17 34324976 34325077 -51113403 + (TG)n Simple_repeat Simple_repeat 2 101 0 213 254 18 0 chr17 34326038 34326053 -51112427 + GA-rich Low_complexity Low_complexity 2 15 -42 1891 149 7 16 chr17 34326053 34326362 -51112118 + AluJo SINE Alu 1 306 -6 213 254 18 0 chr17 34326362 34326401 -51112079 + GA-rich Low_complexity Low_complexity 15 57 0 1939 153 6 13 chr17 34326473 34326754 -51111726 + AluSx SINE Alu 1 281 -31 243 0 0 0 chr17 34326754 34326781 -51111699 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1939 153 6 13 chr17 34326781 34326813 -51111667 + AluSx SINE Alu 281 312 0 331 288 40 62 chr17 34327275 34327468 -51111012 + MIR SINE MIR 39 226 -36 774 165 47 0 chr17 34327548 34327675 -51110805 - FLAM_C SINE Alu 0 133 1 2420 88 0 7 chr17 34327904 34328211 -51110269 + AluSq SINE Alu 1 305 -8 367 179 71 62 chr17 34328349 34328461 -51110019 - MIR SINE MIR -92 170 58 2331 78 0 0 chr17 34328515 34328798 -51109682 + AluY SINE Alu 1 283 -28 501 222 104 7 chr17 34328807 34328942 -51109538 - MIR3 SINE MIR -51 157 10 2132 103 0 3 chr17 34329965 34330247 -51108233 - AluSq SINE Alu -16 297 17 382 295 45 45 chr17 34330974 34331130 -51107350 - MIR SINE MIR -14 248 93 2495 69 0 7 chr17 34331136 34331442 -51107038 + AluY SINE Alu 1 304 -7 2452 84 0 13 chr17 34331907 34332218 -51106262 + AluY SINE Alu 1 307 -4 875 160 17 40 chr17 34332230 34332467 -51106013 + FAM SINE Alu 1 101 0 956 61 0 0 chr17 34332893 34333008 -51105472 - AluSq/x SINE Alu -197 115 1 247 206 69 59 chr17 34333175 34333277 -51105203 - MIR SINE MIR -70 192 90 526 250 64 27 chr17 34334496 34334684 -51103796 + MIR SINE MIR 53 247 -15 352 298 30 8 chr17 34334696 34334827 -51103653 + MIR SINE MIR 79 212 -50 259 306 32 16 chr17 34334924 34335048 -51103432 + MIR SINE MIR 81 206 -56 1098 198 0 6 chr17 34335227 34335409 -51103071 - AluJb SINE Alu -25 287 107 291 28 0 0 chr17 34335583 34335619 -51102861 + (CA)n Simple_repeat Simple_repeat 2 37 0 183 129 0 0 chr17 34335619 34335650 -51102830 + (TC)n Simple_repeat Simple_repeat 2 32 0 827 140 67 28 chr17 34335652 34335830 -51102650 - MER53 DNA DNA -1 188 4 515 167 135 0 chr17 34335940 34336036 -51102444 - FLAM_A SINE Alu -30 112 4 1069 153 6 11 chr17 34336409 34336586 -51101894 - AluJb SINE Alu 0 312 137 742 151 0 0 chr17 34336652 34336758 -51101722 + FLAM_C SINE Alu 3 108 -35 567 274 11 21 chr17 34337672 34337862 -51100618 - MIR SINE MIR -1 261 74 2106 132 0 7 chr17 34337872 34338168 -51100312 - AluSx SINE Alu -18 294 1 258 272 136 0 chr17 34338266 34338347 -51100133 + MER5A DNA MER1_type 12 103 -86 200 222 111 16 chr17 34338701 34338764 -51099716 + MIR SINE MIR 82 150 -112 345 284 90 8 chr17 34339191 34339325 -51099155 + MIR SINE MIR 20 164 -98 1042 104 0 0 chr17 34339383 34339518 -51098962 + AluSq/x SINE Alu 1 135 -177 2202 88 3 11 chr17 34339519 34339828 -51098652 + AluSp SINE Alu 1 307 0 201 214 0 0 chr17 34340479 34340521 -51097959 - L2 LINE L2 -2 3270 3229 2563 69 0 0 chr17 34340674 34340978 -51097502 + AluY SINE Alu 1 304 -7 3102 225 63 6 chr17 34340980 34341875 -51096605 + L1M4 LINE L1 2294 3239 -2907 2382 43 36 10 chr17 34342236 34342537 -51095943 + AluY SINE Alu 1 309 -2 2148 110 23 10 chr17 34342548 34342679 -51095801 + AluSx SINE Alu 1 129 -183 2166 91 39 3 chr17 34342679 34342965 -51095515 + AluSg1 SINE Alu 1 296 -13 2148 110 23 10 chr17 34342965 34343134 -51095346 + AluSx SINE Alu 129 305 -7 186 250 42 0 chr17 34343134 34343182 -51095298 - L2 LINE L2 -30 3283 3234 335 145 0 0 chr17 34343478 34343548 -51094932 + AluY SINE Alu 8 52 -250 1460 89 0 5 chr17 34343548 34343739 -51094741 + AluY SINE Alu 109 298 -13 2073 131 7 3 chr17 34343810 34344107 -51094373 + AluSq SINE Alu 1 298 -15 490 156 96 78 chr17 34344662 34344829 -51093651 - Charlie5 DNA MER1_type -27 2585 2416 1402 185 11 41 chr17 34344842 34345112 -51093368 + AluJo SINE Alu 5 266 -46 21 0 0 0 chr17 34345161 34345182 -51093298 + AT_rich Low_complexity Low_complexity 1 21 0 805 166 0 10 chr17 34345183 34345334 -51093146 - MER33 DNA MER1_type -259 65 1 38 0 0 0 chr17 34345692 34345730 -51092750 + AT_rich Low_complexity Low_complexity 1 38 0 2543 69 3 0 chr17 34345738 34346043 -51092437 + AluY SINE Alu 1 306 -5 2325 100 0 3 chr17 34346244 34346544 -51091936 + AluSq SINE Alu 1 299 -14 759 181 0 0 chr17 34346555 34346688 -51091792 + FLAM_A SINE Alu 1 133 0 394 253 192 7 chr17 34347132 34347278 -51091202 - MER5A DNA MER1_type -7 182 10 2536 47 0 17 chr17 34347507 34347808 -51090672 + AluY SINE Alu 1 296 -15 2433 67 13 0 chr17 34348187 34348486 -51089994 + AluY SINE Alu 1 303 -8 2085 150 0 0 chr17 34349264 34349558 -51088922 + AluSx SINE Alu 3 296 -16 219 69 0 0 chr17 34350467 34350496 -51087984 + (TA)n Simple_repeat Simple_repeat 1 29 0 21 36 0 0 chr17 34350786 34350814 -51087666 + AT_rich Low_complexity Low_complexity 1 28 0 2221 113 6 0 chr17 34351120 34351431 -51087049 - AluSq SINE Alu 0 313 1 2198 86 14 17 chr17 34353172 34353464 -51085016 - AluSc SINE Alu -18 291 1 1641 165 10 34 chr17 34353553 34353844 -51084636 - AluJo SINE Alu -28 284 1 1812 122 23 8 chr17 34354059 34354322 -51084158 + AluJo SINE Alu 26 292 -20 710 151 0 55 chr17 34354943 34355089 -51083391 - L1PB4 LINE L1 -1 6155 6018 1531 171 13 62 chr17 34355112 34355421 -51083059 + AluJb SINE Alu 1 294 -18 1156 168 53 14 chr17 34356224 34356432 -51082048 - AluJb SINE Alu -95 217 2 1619 219 0 0 chr17 34356432 34356733 -51081747 - AluJo SINE Alu -11 301 1 469 153 10 71 chr17 34356760 34356858 -51081622 - FLAM_A SINE Alu -46 96 5 2208 124 7 0 chr17 34357456 34357763 -51080717 - AluSg SINE Alu 0 310 2 2202 95 3 3 chr17 34357844 34358159 -51080321 - AluSp SINE Alu 0 315 1 1328 164 13 25 chr17 34358318 34358556 -51079924 + MER46A DNA MER2_type 2 236 0 352 390 0 0 chr17 34359268 34359445 -51079035 + (CGG)n Simple_repeat Simple_repeat 2 178 0 281 333 0 0 chr17 34359434 34359608 -51078872 + GA-rich Low_complexity Low_complexity 2 175 0 * 27 73 0 0 chr17 34359947 34360002 -51078478 + AT_rich Low_complexity Low_complexity 1 55 0 1843 171 0 4 chr17 34360008 34360288 -51078192 - AluJo SINE Alu -30 282 4 1694 63 113 0 chr17 34360300 34360522 -51077958 - AluY SINE Alu -64 247 1 739 230 126 4 chr17 34360879 34361109 -51077371 + MIR SINE MIR 3 260 -2 386 232 169 28 chr17 34361125 34361302 -51077178 - MIR SINE MIR -5 257 56 188 154 77 0 chr17 34362138 34362177 -51076303 - MER5A DNA MER1_type -26 163 122 211 305 168 32 chr17 34362974 34363259 -51075221 - L2 LINE L2 -686 2628 2305 610 275 118 17 chr17 34363335 34363622 -51074858 + L2 LINE L2 2092 2407 -907 203 129 0 113 chr17 34363631 34363651 -51074829 - MER5B DNA MER1_type -98 80 59 2050 120 27 3 chr17 34363651 34363943 -51074537 - AluSg SINE Alu -9 301 3 203 129 0 113 chr17 34363943 34363984 -51074496 - MER5B DNA MER1_type -119 59 26 214 271 119 92 chr17 34363996 34364244 -51074236 - L2 LINE L2 -1147 2167 1927 1020 154 109 20 chr17 34364244 34364445 -51074035 - MER20 DNA MER1_type 0 219 1 214 271 119 92 chr17 34364445 34364683 -51073797 - L2 LINE L2 -1387 1927 1668 695 143 22 201 chr17 34364815 34365129 -51073351 - MIR SINE MIR 0 262 5 2474 77 3 3 chr17 34365254 34365564 -51072916 - AluY SINE Alu -1 310 1 1397 146 0 14 chr17 34365676 34365915 -51072565 + AluSg/x SINE Alu 73 308 0 540 188 0 0 chr17 34365920 34366016 -51072464 + MER5A DNA MER1_type 62 157 -32 417 157 0 24 chr17 34366016 34366113 -51072367 - FLAM SINE Alu -25 108 44 218 222 143 0 chr17 34366117 34366180 -51072300 + L2 LINE L2 3242 3313 0 2129 108 19 38 chr17 34366226 34366396 -51072084 - AluSx SINE Alu -3 309 146 2216 76 22 51 chr17 34366396 34366711 -51071769 - AluY SINE Alu -5 306 1 2129 108 19 38 chr17 34366711 34366855 -51071625 - AluSx SINE Alu -166 146 1 206 284 95 0 chr17 34367045 34367119 -51071361 + MIR SINE MIR 44 124 -84 562 159 290 7 chr17 34367273 34367411 -51071069 + MER53 DNA DNA 1 177 -12 397 167 204 19 chr17 34367738 34367846 -51070634 + L2 LINE L2 3180 3307 -6 370 240 47 80 chr17 34368011 34368161 -51070319 - MIR SINE MIR -70 192 48 296 127 18 0 chr17 34368593 34368648 -51069832 + (CTCGG)n Simple_repeat Simple_repeat 3 58 0 364 324 79 9 chr17 34369780 34369973 -51068507 - MIR SINE MIR -55 207 5 328 224 174 10 chr17 34369994 34370092 -51068388 + MIR3 SINE MIR 93 206 -2 524 154 13 0 chr17 34370927 34371005 -51067475 + Tigger5 DNA MER2_type 1 79 -2244 291 257 0 0 chr17 34371086 34371156 -51067324 + MIR SINE MIR 155 224 -38 1313 217 39 64 chr17 34371335 34371507 -51066973 - L2 LINE L2 0 3313 3138 1875 114 28 74 chr17 34371507 34371832 -51066648 + AluSq SINE Alu 1 310 -3 1313 217 39 64 chr17 34371832 34372097 -51066383 - L2 LINE L2 -175 3138 2887 2133 82 41 27 chr17 34372620 34372912 -51065568 - AluY SINE Alu -15 296 1 2562 239 168 18 chr17 34372928 34373899 -51064581 - L2 LINE L2 -1712 1602 486 2613 50 0 0 chr17 34375250 34375549 -51062931 - AluY SINE Alu -12 299 1 225 303 204 8 chr17 34375580 34375712 -51062768 + L2 LINE L2 2702 2859 -455 243 177 0 97 chr17 34375721 34375783 -51062697 - MER94 DNA DNA -12 122 67 643 283 66 35 chr17 34375862 34376120 -51062360 + L2 LINE L2 2915 3180 -92 366 228 91 121 chr17 34378640 34378696 -51059784 + MIR SINE MIR 20 76 -186 2612 48 0 0 chr17 34378696 34378990 -51059490 - AluY SINE Alu -17 294 1 366 228 91 121 chr17 34378990 34379165 -51059315 + MIR SINE MIR 76 244 -18 1267 143 72 14 chr17 34379399 34379622 -51058858 + MER46A DNA MER2_type 1 236 0 2080 131 10 10 chr17 34380583 34380895 -51057585 + AluSx SINE Alu 1 312 0 1983 146 33 0 chr17 34380899 34381200 -51057280 + AluSq SINE Alu 2 312 -1 218 281 229 15 chr17 34381328 34381738 -51056742 + L2 LINE L2 711 1208 -2106 2116 120 7 0 chr17 34381951 34382242 -51056238 + AluSx SINE Alu 5 297 -15 2184 83 7 4 chr17 34382249 34382565 -51055915 + AluSc SINE Alu 1 317 0 2195 89 13 40 chr17 34382748 34383051 -51055429 + AluSq SINE Alu 1 295 -18 374 245 50 29 chr17 34383168 34383307 -51055173 + MER5B DNA MER1_type 2 143 -35 395 235 30 3 chr17 34383653 34383820 -51054660 + MIR SINE MIR 11 232 -30 2042 123 0 63 chr17 34383858 34384176 -51054304 + AluSx SINE Alu 1 298 -14 2488 80 0 0 chr17 34384648 34384949 -51053531 - AluSg SINE Alu -9 301 1 346 194 36 108 chr17 34385791 34385861 -51052619 + L2 LINE L2 2282 2339 -975 5188 90 4 23 chr17 34385861 34386417 -51052063 - L1PA13 LINE L1 -11 6152 5612 2537 41 24 0 chr17 34386417 34386709 -51051771 - AluY SINE Alu -12 299 1 5188 90 4 23 chr17 34386709 34386888 -51051592 - L1PA13 LINE L1 -551 5612 5431 346 194 36 108 chr17 34386888 34386956 -51051524 + L2 LINE L2 2339 2410 -904 1082 250 69 69 chr17 34386976 34387697 -51050783 + L2 LINE L2 2587 3292 -21 1424 160 13 75 chr17 34387778 34388084 -51050396 + AluJo SINE Alu 1 287 -25 599 201 94 7 chr17 34388438 34388587 -51049893 - MER112 DNA MER1_type -96 164 3 1611 153 3 103 chr17 34389575 34389916 -51048564 - AluJo SINE Alu -3 309 3 1530 171 17 35 chr17 34391086 34391373 -51047107 + AluJb SINE Alu 1 282 -30 201 39 0 0 chr17 34391376 34391402 -51047078 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 2223 92 11 0 chr17 34391736 34392018 -51046462 - AluSx SINE Alu -26 286 2 520 255 24 53 chr17 34392744 34392952 -51045528 - L2 LINE L2 0 3313 3112 1750 111 96 11 chr17 34393009 34393289 -51045191 + AluSx SINE Alu 1 304 -8 493 130 90 0 chr17 34393289 34393404 -51045076 - L1MA4 LINE L1 -235 6065 5939 405 308 75 54 chr17 34393404 34393655 -51044825 - L2 LINE L2 -292 3021 2771 2138 127 0 22 chr17 34394790 34395106 -51043374 - AluSx SINE Alu -3 309 1 1695 165 0 54 chr17 34395139 34395455 -51043025 + AluJo SINE Alu 1 299 -13 1917 129 0 21 chr17 34396383 34396662 -51041818 + AluSq SINE Alu 6 278 -35 200 298 107 60 chr17 34396739 34396907 -51041573 + L3 LINE CR1 1391 1566 -11 290 326 58 47 chr17 34398818 34398990 -51039490 + HAL1 LINE L1 1 174 -2333 673 232 167 66 chr17 34399000 34399396 -51039084 + HAL1 LINE L1 256 691 -1816 * 1128 235 47 10 chr17 34399394 34399823 -51038657 + L1M4b LINE L1 1608 2191 -4947 * 1188 165 102 78 chr17 34399815 34399847 -51038633 + L1MC5 LINE L1 7476 7506 -489 805 196 130 5 chr17 34399847 34400031 -51038449 + MER3 DNA MER1_type 3 209 0 1188 165 102 78 chr17 34400031 34400237 -51038243 + L1MC5 LINE L1 7506 7706 -289 2011 105 61 0 chr17 34400237 34400514 -51037966 + AluSx SINE Alu 1 294 -18 1188 165 102 78 chr17 34400514 34400712 -51037768 + L1MC5 LINE L1 7706 7984 -11 1926 156 0 23 chr17 34400713 34401015 -51037465 - AluSx SINE Alu -14 298 4 1007 224 102 9 chr17 34401034 34401369 -51037111 + HAL1 LINE L1 1140 1505 -1002 649 222 77 73 chr17 34401387 34401648 -51036832 + HAL1 LINE L1 1609 1870 -637 258 237 49 112 chr17 34401747 34401849 -51036631 + HAL1 LINE L1 2043 2125 -382 1847 164 3 20 chr17 34401849 34402147 -51036333 + AluJo SINE Alu 1 293 -19 258 237 49 112 chr17 34402147 34402268 -51036212 + HAL1 LINE L1 2125 2252 -255 1802 157 23 26 chr17 34402280 34402585 -51035895 + AluJo SINE Alu 1 304 -8 2435 54 0 41 chr17 34402702 34403017 -51035463 - AluY SINE Alu -9 302 1 2230 107 3 3 chr17 34403637 34403937 -51034543 + AluSq SINE Alu 1 300 -13 759 284 81 49 chr17 34405378 34405948 -51032532 - L1MEd LINE L1 -5281 838 251 2120 117 0 0 chr17 34406522 34406829 -51031651 + AluSx SINE Alu 1 307 0 2573 74 0 3 chr17 34407056 34407365 -51031115 + AluSq SINE Alu 1 308 -5 1604 198 0 18 chr17 34407425 34407708 -51030772 - AluSx SINE Alu -15 297 20 1310 206 29 39 chr17 34407997 34408308 -51030172 + AluJo SINE Alu 1 308 -4 2034 130 23 10 chr17 34408705 34409013 -51029467 + AluSx SINE Alu 1 312 0 1475 140 34 93 chr17 34409024 34409346 -51029134 + AluJb SINE Alu 1 303 -9 1969 73 91 22 chr17 34409497 34409772 -51028708 + AluSq SINE Alu 6 299 -14 198 0 0 0 chr17 34410718 34410740 -51027740 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 3504 204 74 11 chr17 34410915 34411540 -51026940 + L1ME1 LINE L1 3713 4422 -1724 2092 134 0 3 chr17 34411540 34411839 -51026641 + AluSq SINE Alu 2 299 -14 3504 204 74 11 chr17 34411839 34412186 -51026294 + L1ME1 LINE L1 4422 4746 -1400 1158 217 115 38 chr17 34412204 34412410 -51026070 + L1ME1 LINE L1 4957 5146 -1020 1693 214 0 0 chr17 34412410 34412713 -51025767 + AluJo SINE Alu 1 303 -9 1158 217 115 38 chr17 34412713 34413373 -51025107 + L1ME1 LINE L1 5146 5960 -206 629 153 33 159 chr17 34413568 34413869 -51024611 + L1MC5 LINE L1 7403 7665 -296 301 290 75 11 chr17 34413870 34413963 -51024517 + HAL1b LINE L1 93 191 -1157 569 99 0 59 chr17 34413978 34414079 -51024401 + AluSg/x SINE Alu 214 308 -2 458 246 90 8 chr17 34414664 34414786 -51023694 + L2 LINE L2 3182 3313 0 2070 126 3 7 chr17 34414985 34415278 -51023202 - AluSx SINE Alu -20 292 1 22 0 0 0 chr17 34415748 34415770 -51022710 + AT_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr17 34416183 34416213 -51022267 + AT_rich Low_complexity Low_complexity 1 30 0 2009 75 93 11 chr17 34416213 34416492 -51021988 + AluY SINE Alu 1 302 -9 313 224 0 0 chr17 34416612 34416679 -51021801 + L1ME LINE L1 5732 5798 -323 2243 110 7 0 chr17 34420258 34420557 -51017923 + AluSq SINE Alu 1 301 -12 752 97 81 135 chr17 34421178 34421363 -51017117 - MER5B DNA MER1_type -3 175 1 2315 102 3 0 chr17 34421463 34421766 -51016714 + AluSx SINE Alu 1 304 -8 580 184 0 10 chr17 34422748 34422846 -51015634 - AluJ/FLAM SINE Alu -215 97 1 1680 191 7 3 chr17 34424274 34424573 -51013907 + AluJb SINE Alu 1 300 -12 372 242 81 60 chr17 34424914 34425063 -51013417 + L2 LINE L2 3162 3313 0 1114 161 6 0 chr17 34425279 34425447 -51013033 + FRAM SINE Alu 1 165 -11 547 200 122 9 chr17 34425640 34425755 -51012725 + FLAM_C SINE Alu 1 128 -5 374 251 274 22 chr17 34426202 34426381 -51012099 + MIR SINE MIR 6 229 -33 21 0 0 0 chr17 34427146 34427167 -51011313 + AT_rich Low_complexity Low_complexity 1 21 0 349 62 234 0 chr17 34427756 34427820 -51010660 + MADE1 DNA Mariner 2 80 0 356 248 10 30 chr17 34428332 34428433 -51010047 - MER5B DNA MER1_type -5 173 75 2323 99 3 3 chr17 34428916 34429229 -51009251 + AluSq SINE Alu 1 313 0 442 178 71 0 chr17 34429316 34429413 -51009067 + MER5A DNA MER1_type 4 100 -78 685 188 0 16 chr17 34429423 34429551 -51008929 + FLAM_C SINE Alu 7 132 -11 204 125 0 0 chr17 34431404 34431436 -51007044 + (A)n Simple_repeat Simple_repeat 1 32 0 2328 45 42 7 chr17 34432799 34433086 -51005394 - AluY SINE Alu -14 297 1 2741 214 90 12 chr17 34433351 34434465 -51004015 + L1ME3 LINE L1 4886 6106 -56 422 192 50 0 chr17 34434881 34434980 -51003500 + L1M4 LINE L1 3492 3595 -2551 533 243 80 42 chr17 34435033 34435321 -51003159 + L1MC5 LINE L1 7631 7929 -32 1974 146 0 7 chr17 34435339 34435641 -51002839 + AluSx SINE Alu 4 303 -9 1979 150 0 7 chr17 34435924 34436247 -51002233 + AluSx SINE Alu 1 321 0 242 316 105 38 chr17 34436365 34436498 -51001982 + MIR SINE MIR 50 191 -71 1646 150 0 93 chr17 34439317 34439450 -50999030 + AluJb SINE Alu 13 102 -210 2296 115 0 0 chr17 34439450 34439755 -50998725 + AluSx SINE Alu 1 305 -7 1646 150 0 93 chr17 34439755 34439934 -50998546 + AluJb SINE Alu 102 296 -16 2061 128 0 3 chr17 34440130 34440426 -50998054 + AluSq SINE Alu 1 295 -18 344 228 139 0 chr17 34440505 34440606 -50997874 - L2 LINE L2 -1 3271 3157 279 0 0 0 chr17 34440925 34440956 -50997524 + (CA)n Simple_repeat Simple_repeat 1 31 0 2117 139 3 0 chr17 34441120 34441137 -50997343 - AluSx SINE Alu -9 303 288 384 22 0 0 chr17 34441137 34441182 -50997298 + (TATG)n Simple_repeat Simple_repeat 2 46 0 2117 139 3 0 chr17 34441182 34441466 -50997014 - AluSx SINE Alu -24 288 1 1139 156 0 0 chr17 34441645 34441812 -50996668 + AluSg/x SINE Alu 138 304 -8 198 103 0 0 chr17 34442170 34442199 -50996281 + (TATATG)n Simple_repeat Simple_repeat 4 32 0 1924 148 17 10 chr17 34442816 34443113 -50995367 + AluSx SINE Alu 1 299 -13 473 320 0 47 chr17 34443576 34443748 -50994732 - MER5A DNA MER1_type 0 189 26 2232 99 3 0 chr17 34443824 34444132 -50994348 - AluSp SINE Alu 0 309 1 225 36 0 0 chr17 34444467 34444495 -50993985 + U6 snRNA snRNA 1 28 -79 2057 153 7 0 chr17 34444640 34444947 -50993533 - AluJb SINE Alu -2 310 2 2044 125 0 24 chr17 34445015 34445311 -50993169 + AluSx SINE Alu 1 289 -23 415 240 273 26 chr17 34445474 34445628 -50992852 + MIR SINE MIR 3 194 -68 244 178 0 0 chr17 34446378 34446423 -50992057 + MER97c DNA MER1_type? 535 579 -511 1124 65 59 24 chr17 34446451 34446621 -50991859 - MER30 DNA MER1_type -54 176 1 1576 176 40 18 chr17 34448102 34448409 -50990071 - AluJo SINE Alu 0 313 1 866 213 11 5 chr17 34448931 34449119 -50989361 + MER5A DNA MER1_type 1 189 0 2269 116 7 3 chr17 34449162 34449472 -50989008 + AluSq SINE Alu 1 311 -2 2281 117 0 0 chr17 34449483 34449783 -50988697 + AluSx SINE Alu 1 300 -12 1681 159 3 43 chr17 34450339 34450641 -50987839 - AluJo SINE Alu -11 301 12 2513 59 0 3 chr17 34450888 34451193 -50987287 - AluY SINE Alu -7 304 1 21 0 0 0 chr17 34451264 34451285 -50987195 + AT_rich Low_complexity Low_complexity 1 21 0 731 196 0 0 chr17 34451561 34451694 -50986786 + FLAM_A SINE Alu 1 133 0 2206 102 10 3 chr17 34451714 34452009 -50986471 + AluSx SINE Alu 1 297 -15 2139 103 25 0 chr17 34452220 34452501 -50985979 + AluSx SINE Alu 1 288 -24 1940 153 27 0 chr17 34453711 34454012 -50984468 + AluSq SINE Alu 1 309 -4 1997 122 0 21 chr17 34454012 34454333 -50984147 + AluSg1 SINE Alu 1 315 0 2040 104 0 11 chr17 34454345 34454623 -50983857 + AluSx SINE Alu 1 275 -37 732 264 101 44 chr17 34455260 34455552 -50982928 + L1MC5 LINE L1 7246 7520 -441 2270 88 0 0 chr17 34455552 34455835 -50982645 - AluSx SINE Alu -29 283 1 732 264 101 44 chr17 34455835 34456193 -50982287 + L1MC5 LINE L1 7520 7917 -44 2122 107 7 0 chr17 34456328 34456619 -50981861 - AluSc SINE Alu -16 293 1 35 54 0 0 chr17 34456734 34456790 -50981690 + AT_rich Low_complexity Low_complexity 1 56 0 197 318 0 0 chr17 34456851 34456895 -50981585 + L2 LINE L2 3210 3253 -19 2171 117 0 3 chr17 34457265 34457548 -50980932 + AluSx SINE Alu 1 282 -30 354 288 180 44 chr17 34457596 34457912 -50980568 + L1M4 LINE L1 5039 5397 -749 192 265 88 15 chr17 34459424 34459492 -50978988 - MIR SINE MIR -184 78 6 376 294 114 67 chr17 34459919 34460262 -50978218 + HAL1 LINE L1 712 1070 -1437 * 390 253 224 47 chr17 34460245 34460452 -50978028 + HAL1 LINE L1 1816 2086 -421 2104 123 16 29 chr17 34460452 34460768 -50977712 + AluSx SINE Alu 1 312 0 390 253 224 47 chr17 34460768 34460837 -50977643 + HAL1 LINE L1 2086 2141 -366 1750 168 0 55 chr17 34461071 34461380 -50977100 - AluJb SINE Alu -20 292 1 1891 146 43 9 chr17 34461408 34461737 -50976743 + MER2 DNA MER2_type 1 340 -5 335 279 91 78 chr17 34461744 34461898 -50976582 + HAL1 LINE L1 2352 2507 0 216 0 0 0 chr17 34462430 34462454 -50976026 + (A)n Simple_repeat Simple_repeat 1 24 0 903 195 34 136 chr17 34463843 34464197 -50974283 + L2 LINE L2 2996 3313 0 213 186 23 0 chr17 34464459 34464502 -50973978 + L2 LINE L2 3254 3297 -16 293 317 87 44 chr17 34465760 34465943 -50972537 + MIR SINE MIR 34 224 -38 751 188 41 0 chr17 34465973 34466143 -50972337 + MER104 DNA MER2_type 1 177 -3 1765 131 0 0 chr17 34466182 34466418 -50972062 - AluSx SINE Alu -76 236 1 2353 87 3 3 chr17 34466735 34467034 -50971446 + AluSx SINE Alu 1 299 -13 1725 173 3 24 chr17 34468872 34469167 -50969313 - AluJo SINE Alu -23 289 1 376 193 14 25 chr17 34469250 34469329 -50969151 - AluJo SINE Alu -20 282 211 992 142 25 12 chr17 34469329 34469491 -50968989 - AluJo SINE Alu -138 174 11 2070 145 0 16 chr17 34469614 34469931 -50968549 + AluSx SINE Alu 1 312 0 815 162 0 22 chr17 34470203 34470339 -50968141 - FLAM_C SINE Alu 0 133 1 504 258 31 43 chr17 34470454 34470617 -50967863 - MIR SINE MIR -75 187 27 24 53 0 0 chr17 34472225 34472263 -50966217 + AT_rich Low_complexity Low_complexity 1 38 0 2093 133 0 20 chr17 34472341 34472641 -50965839 + AluSx SINE Alu 2 295 -17 621 321 89 9 chr17 34472657 34472881 -50965599 - MIR SINE MIR -15 247 6 380 185 50 6 chr17 34472980 34473232 -50965248 + L1MD2 LINE L1 6164 6403 -1569 2568 48 0 13 chr17 34473232 34473547 -50964933 + AluY SINE Alu 1 311 0 23 92 0 0 chr17 34473987 34474052 -50964428 + AT_rich Low_complexity Low_complexity 1 65 0 643 294 50 14 chr17 34474342 34474563 -50963917 - MIR SINE MIR -14 248 20 1226 165 9 14 chr17 34474572 34474790 -50963690 - MER20 DNA MER1_type 0 219 3 225 0 0 0 chr17 34475019 34475044 -50963436 + (T)n Simple_repeat Simple_repeat 1 25 0 1556 181 49 21 chr17 34475210 34475498 -50962982 + AluJo SINE Alu 1 296 -16 23 0 0 0 chr17 34475499 34475522 -50962958 + AT_rich Low_complexity Low_complexity 1 23 0 311 315 125 5 chr17 34475980 34476164 -50962316 - MIR SINE MIR 0 262 57 186 171 0 0 chr17 34476667 34476708 -50961772 + T-rich Low_complexity Low_complexity 1 41 0 252 0 0 0 chr17 34476791 34476819 -50961661 + (TG)n Simple_repeat Simple_repeat 1 28 0 492 110 0 0 chr17 34476837 34476910 -50961570 - AluS SINE Alu -240 73 1 389 325 79 31 chr17 34476941 34477169 -50961311 + MIR SINE MIR 14 252 -10 598 212 88 7 chr17 34477356 34477493 -50960987 + MER96 DNA MER1_type? 1 148 -27 1654 183 0 50 chr17 34478606 34478775 -50959705 - AluJo SINE Alu -11 301 154 2382 80 0 3 chr17 34478775 34479074 -50959406 - AluY SINE Alu -13 298 1 1654 183 0 50 chr17 34479074 34479221 -50959259 - AluJo SINE Alu -158 154 1 2182 120 3 10 chr17 34479253 34479562 -50958918 + AluSx SINE Alu 1 307 -5 1415 176 34 0 chr17 34479959 34480053 -50958427 + AluJo SINE Alu 35 124 -188 2342 91 0 3 chr17 34480053 34480351 -50958129 + AluY SINE Alu 1 297 -14 1415 176 34 0 chr17 34480351 34480495 -50957985 + AluJo SINE Alu 124 281 -31 192 77 0 0 chr17 34480500 34480526 -50957954 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 21 36 0 0 chr17 34480993 34481021 -50957459 + AT_rich Low_complexity Low_complexity 1 28 0 180 0 0 0 chr17 34481905 34481925 -50956555 + (A)n Simple_repeat Simple_repeat 1 20 0 2302 101 3 0 chr17 34482495 34482793 -50955687 + AluSq SINE Alu 1 299 -14 439 247 59 62 chr17 34482846 34483150 -50955330 + L1MC5 LINE L1 7623 7925 -36 2155 132 0 0 chr17 34483161 34483457 -50955023 + AluSx SINE Alu 2 297 -15 2421 92 0 13 chr17 34484150 34484490 -50953990 + AluSp SINE Alu 1 336 0 1446 174 80 28 chr17 34484495 34484782 -50953698 + AluJo SINE Alu 1 302 -10 241 162 0 0 chr17 34484854 34484891 -50953589 - Alu SINE Alu -265 38 2 2122 124 0 0 chr17 34484928 34485218 -50953262 - AluSx SINE Alu -16 296 7 1848 166 0 3 chr17 34485291 34485592 -50952888 + AluJb SINE Alu 1 300 -12 28 0 0 0 chr17 34485596 34485624 -50952856 + AT_rich Low_complexity Low_complexity 1 28 0 585 191 73 59 chr17 34485935 34486139 -50952341 - L1MC5 LINE L1 -1045 6916 6710 1764 149 29 0 chr17 34486925 34487240 -50951240 + MER33 DNA MER1_type 1 324 0 1769 83 4 0 chr17 34487693 34487921 -50950559 + AluSp SINE Alu 71 299 -14 374 247 12 12 chr17 34488022 34488107 -50950373 + MER58D DNA MER1_type 9 93 -293 1024 155 0 11 chr17 34488131 34488376 -50950104 + AluSx SINE Alu 1 304 -6 1003 148 56 84 chr17 34488379 34488663 -50949817 + MER58D DNA MER1_type 110 385 -1 5139 156 90 74 chr17 34488835 34489318 -50949162 - Charlie1a DNA MER1_type -1307 1454 980 2218 120 0 7 chr17 34489318 34489627 -50948853 + AluSx SINE Alu 3 309 -3 5139 156 90 74 chr17 34489627 34489764 -50948716 - Charlie1a DNA MER1_type -1781 980 847 2162 127 0 19 chr17 34489764 34490078 -50948402 - AluSx SINE Alu -4 308 1 5139 156 90 74 chr17 34490078 34490864 -50947616 - Charlie1a DNA MER1_type -1914 847 24 23 54 0 0 chr17 34491571 34491608 -50946872 + AT_rich Low_complexity Low_complexity 1 37 0 245 231 92 0 chr17 34491886 34491951 -50946529 - MIR SINE MIR -101 107 37 530 314 35 6 chr17 34491958 34492130 -50946350 + MER5B DNA MER1_type 1 177 -1 315 282 64 124 chr17 34492598 34493112 -50945368 - L1M2 LINE L1 -5472 1377 895 662 213 21 85 chr17 34494085 34494130 -50944350 + MER5B DNA MER1_type 1 47 -131 1954 162 0 16 chr17 34494130 34494438 -50944042 - AluJb SINE Alu -9 303 1 662 213 21 85 chr17 34494438 34494580 -50943900 + MER5B DNA MER1_type 47 176 -2 1660 93 31 4 chr17 34496255 34496513 -50941967 - L1MA3 LINE L1 0 6305 6041 2085 114 7 0 chr17 34496862 34497163 -50941317 + AluSx SINE Alu 1 303 0 918 176 26 0 chr17 34497188 34497341 -50941139 + FRAM SINE Alu 3 159 -17 26 30 0 0 chr17 34497341 34497374 -50941106 + AT_rich Low_complexity Low_complexity 1 33 0 1196 129 0 0 chr17 34498230 34498401 -50940079 + AluJo SINE Alu 1 171 -141 523 200 0 0 chr17 34498403 34498498 -50939982 - AluSp SINE Alu -82 231 137 1947 138 14 0 chr17 34498506 34498795 -50939685 - AluSq SINE Alu -5 308 16 417 222 9 0 chr17 34499224 34499332 -50939148 + L1MB7 LINE L1 6060 6168 -16 2491 44 24 0 chr17 34499485 34499781 -50938699 + AluY SINE Alu 1 303 -8 1672 86 0 9 chr17 34500924 34501144 -50937336 + AluSq SINE Alu 88 305 -8 406 179 71 62 chr17 34501282 34501394 -50937086 - MIR SINE MIR -92 170 58 2289 78 0 0 chr17 34501448 34501731 -50936749 + AluY SINE Alu 1 283 -28 548 222 104 7 chr17 34501740 34501875 -50936605 - MIR3 SINE MIR -51 157 10 2068 103 0 3 chr17 34502898 34503180 -50935300 - AluSq SINE Alu -16 297 17 456 276 55 70 chr17 34503907 34504069 -50934411 - MIR SINE MIR -14 248 88 2413 78 0 0 chr17 34504069 34504378 -50934102 + AluY SINE Alu 1 309 -2 456 276 55 70 chr17 34504378 34504414 -50934066 - MIR SINE MIR -174 88 53 2365 84 0 13 chr17 34504840 34505151 -50933329 + AluY SINE Alu 1 307 -4 918 160 17 40 chr17 34505163 34505400 -50933080 + FAM SINE Alu 1 101 0 355 255 310 11 chr17 34505714 34505985 -50932495 + L2 LINE L2 2157 2508 -806 535 308 58 22 chr17 34506034 34506258 -50932222 + L2 LINE L2 2828 3059 -213 2214 120 0 0 chr17 34506331 34506640 -50931840 - AluSx SINE Alu -1 311 3 2134 99 7 3 chr17 34506827 34507145 -50931335 + AluSq SINE Alu 1 319 0 622 238 149 47 chr17 34507329 34507543 -50930937 - MIR SINE MIR -1 261 26 403 270 92 13 chr17 34507592 34507744 -50930736 - MIR SINE MIR -94 168 5 1660 128 8 0 chr17 34508714 34508963 -50929517 - L1MB7 LINE L1 -9 6175 5925 1880 108 74 0 chr17 34509159 34509428 -50929052 - AluSg SINE Alu -21 289 1 344 263 161 8 chr17 34509945 34510063 -50928417 + MIR3 SINE MIR 10 145 -63 1986 144 6 13 chr17 34510278 34510590 -50927890 - AluSx SINE Alu -2 310 1 437 90 0 0 chr17 34510626 34510693 -50927787 - MER53 DNA DNA -2 187 121 2208 99 0 13 chr17 34510719 34511021 -50927459 + AluSx SINE Alu 1 298 -14 2348 70 0 3 chr17 34511023 34511321 -50927159 + AluY SINE Alu 3 299 -12 425 307 137 10 chr17 34511454 34511659 -50926821 - MIR SINE MIR -11 251 21 188 291 0 97 chr17 34512722 34512825 -50925655 + MIR SINE MIR 42 134 -74 220 271 73 62 chr17 34514092 34514188 -50924292 + MIR SINE MIR 71 167 -95 420 104 0 0 chr17 34515438 34515505 -50922975 + (TA)n Simple_repeat Simple_repeat 2 68 0 30 0 0 0 chr17 34515520 34515550 -50922930 + AT_rich Low_complexity Low_complexity 1 30 0 302 193 110 18 chr17 34515550 34515659 -50922821 - L1ME3A LINE L1 -6 6164 6046 2469 69 3 0 chr17 34515725 34516029 -50922451 - AluY SINE Alu -6 305 1 584 265 28 62 chr17 34516033 34516085 -50922395 - MIR SINE MIR -10 252 200 1788 151 0 10 chr17 34516085 34516412 -50922068 - AluJo SINE Alu 0 312 1 584 265 28 62 chr17 34516412 34516426 -50922054 - MIR SINE MIR -62 200 187 288 77 0 0 chr17 34516426 34516465 -50922015 + (CA)n Simple_repeat Simple_repeat 2 40 0 584 265 28 62 chr17 34516465 34516608 -50921872 - MIR SINE MIR -75 187 49 363 242 77 65 chr17 34517683 34517841 -50920639 + MIR SINE MIR 21 179 -63 505 227 258 0 chr17 34517893 34518056 -50920424 - MIR SINE MIR -2 260 56 2105 128 7 0 chr17 34518352 34518650 -50919830 - AluSx SINE Alu -12 300 1 235 220 0 0 chr17 34519443 34519493 -50918987 - MIR SINE MIR -72 136 87 183 80 0 0 chr17 34519888 34519913 -50918567 + (TTCA)n Simple_repeat Simple_repeat 1 25 0 341 310 71 0 chr17 34519918 34520031 -50918449 - L2 LINE L2 -22 3291 3171 228 226 0 0 chr17 34523073 34523126 -50915354 + CT-rich Low_complexity Low_complexity 2 54 0 2057 117 0 0 chr17 34523241 34523565 -50914915 - AluSx SINE Alu 0 324 1 1460 194 7 36 chr17 34523596 34523900 -50914580 + AluJb SINE Alu 3 297 -15 750 144 0 50 chr17 34523900 34524028 -50914452 - FLAM_C SINE Alu -178 124 2 2406 54 10 0 chr17 34524040 34524336 -50914144 - AluY SINE Alu -12 299 1 257 325 12 0 chr17 34524602 34524685 -50913795 - MER91A DNA MER1_type -110 86 3 2305 100 3 0 chr17 34524890 34525201 -50913279 + AluSp SINE Alu 1 312 -1 248 328 255 12 chr17 34525331 34525578 -50912902 - L2 LINE L2 -451 2863 2557 968 181 12 0 chr17 34525601 34525767 -50912713 + AluJb SINE Alu 136 303 -9 2199 106 0 22 chr17 34525769 34526080 -50912400 + AluSx SINE Alu 1 304 -8 373 269 43 57 chr17 34526476 34526617 -50911863 + MIR SINE MIR 21 159 -103 1741 247 108 11 chr17 34527187 34527483 -50910997 - LTR40a LTR ERVL 0 519 158 2003 108 7 0 chr17 34527483 34527760 -50910720 - AluY SINE Alu -32 279 1 1741 247 108 11 chr17 34527760 34527936 -50910544 - LTR40a LTR ERVL -361 158 1 2017 136 0 0 chr17 34528446 34528766 -50909714 - AluSx SINE Alu 0 324 5 992 192 0 6 chr17 34529229 34529396 -50909084 + FAM SINE Alu 1 166 -9 482 274 70 5 chr17 34529623 34529918 -50908562 - MLT1L LTR MaLR -112 399 131 310 91 0 0 chr17 34529987 34530072 -50908408 - AluSq SINE Alu 0 322 238 1361 116 16 0 chr17 34530075 34530264 -50908216 - AluSq SINE Alu -121 192 1 2225 110 10 0 chr17 34530412 34530721 -50907759 + AluSx SINE Alu 1 312 0 338 266 83 53 chr17 34530822 34530991 -50907489 + MLT1J LTR MaLR 336 509 -2 910 162 5 81 chr17 34531210 34531280 -50907200 + MER20 DNA MER1_type 26 100 -119 2205 110 3 3 chr17 34531280 34531588 -50906892 + AluSx SINE Alu 1 308 -4 910 162 5 81 chr17 34531588 34531727 -50906753 + MER20 DNA MER1_type 100 219 0 524 262 76 6 chr17 34531736 34531908 -50906572 + L2 LINE L2 2509 2692 -622 645 85 0 0 chr17 34531927 34532009 -50906471 - AluY SINE Alu -228 82 1 471 212 0 44 chr17 34532013 34532150 -50906330 + L2 LINE L2 2725 2855 -459 854 199 93 42 chr17 34532177 34532393 -50906087 - AluJo SINE Alu 0 312 86 941 259 81 19 chr17 34532393 34532574 -50905906 + L2 LINE L2 2950 3118 -195 2012 101 29 0 chr17 34532574 34532896 -50905584 - AluSq SINE Alu 0 330 1 941 259 81 19 chr17 34532896 34533033 -50905447 + L2 LINE L2 3118 3289 -24 1459 121 128 24 chr17 34533036 34533285 -50905195 - AluJb SINE Alu -17 295 21 465 220 53 8 chr17 34533507 34533639 -50904841 - MIR SINE MIR -44 218 81 322 299 83 123 chr17 34534928 34535049 -50903431 - L2 LINE L2 -4 3268 3144 1914 112 94 3 chr17 34535049 34535335 -50903145 + AluSx SINE Alu 1 312 0 322 299 83 123 chr17 34535335 34535497 -50902983 - L2 LINE L2 -128 3144 2977 2082 114 3 3 chr17 34535497 34535794 -50902686 - AluSx SINE Alu -15 297 1 322 299 83 123 chr17 34535794 34535990 -50902490 - L2 LINE L2 -295 2977 2807 652 273 120 5 chr17 34536180 34536396 -50902084 - MIR SINE MIR 0 262 22 186 347 56 0 chr17 34537199 34537271 -50901209 + MIR SINE MIR 48 123 -85 888 283 9 22 chr17 34537362 34537592 -50900888 + MIR SINE MIR 7 233 -29 184 339 18 0 chr17 34538794 34538850 -50899630 - MIR SINE MIR -62 146 90 374 292 30 48 chr17 34540309 34540477 -50898003 - MIR3 SINE MIR -36 172 8 211 182 0 0 chr17 34542191 34542224 -50896256 + polypurine Low_complexity Low_complexity 2 34 0 1490 167 104 19 chr17 34542678 34542845 -50895635 - AluJb SINE Alu -6 296 96 180 0 0 0 chr17 34542845 34542865 -50895615 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 1490 167 104 19 chr17 34542865 34542967 -50895513 - AluJb SINE Alu -206 96 4 215 219 172 0 chr17 34544093 34544157 -50894323 - MIR SINE MIR -86 122 48 492 280 147 7 chr17 34546248 34546464 -50892016 - MIR SINE MIR -32 230 2 208 262 16 33 chr17 34547070 34547131 -50891349 - L2 LINE L2 -5 3267 3208 * 255 329 39 78 chr17 34547127 34547410 -50891070 + L2 LINE L2 2980 3251 -21 288 344 55 27 chr17 34547929 34548112 -50890368 + L3b LINE CR1 1274 1461 -122 1449 244 35 73 chr17 34548919 34549261 -50889219 + L1MC4a LINE L1 5276 5081 -1065 2020 134 7 3 chr17 34549261 34549560 -50888920 - AluJb SINE Alu -12 300 1 1449 244 35 73 chr17 34549560 34549873 -50888607 + L1MC4a LINE L1 5080 5403 -743 813 179 8 0 chr17 34549874 34550008 -50888472 + AluJo SINE Alu 2 136 -176 2291 89 3 13 chr17 34550126 34550440 -50888040 + AluSx SINE Alu 1 311 -1 388 380 33 40 chr17 34551295 34551595 -50886885 + L2 LINE L2 2970 3267 -5 224 371 0 0 chr17 34552171 34552260 -50886220 + L2 LINE L2 2890 2978 -294 251 273 83 25 chr17 34552560 34552681 -50885799 - MER20B DNA MER1_type -620 163 36 246 279 250 0 chr17 34552725 34552861 -50885619 - MIR SINE MIR -9 253 84 1848 109 36 0 chr17 34552920 34553167 -50885313 - AluSq SINE Alu -57 256 1 257 226 107 12 chr17 34553199 34553283 -50885197 + L2 LINE L2 3169 3260 -12 190 333 42 42 chr17 34553293 34553413 -50885067 + MIR SINE MIR 46 165 -97 299 250 20 20 chr17 34553722 34553822 -50884658 + MIR SINE MIR 6 105 -157 305 239 5 69 chr17 34555107 34555295 -50883185 + C-rich Low_complexity Low_complexity 5 180 0 24 67 0 0 chr17 34555356 34555401 -50883079 + GC_rich Low_complexity Low_complexity 1 45 0 289 212 141 20 chr17 34556115 34556214 -50882266 - MIR SINE MIR -34 228 118 2300 91 0 7 chr17 34556698 34556996 -50881484 - AluSc SINE Alu -13 296 1 510 271 98 19 chr17 34557259 34557473 -50881007 + MIR SINE MIR 13 243 -19 1287 164 60 4 chr17 34557878 34558110 -50880370 + AluJb SINE Alu 6 250 -62 487 171 171 51 chr17 34559620 34559778 -50878702 - MER5B DNA MER1_type 0 178 2 229 326 156 14 chr17 34562432 34562573 -50875907 + MIR3 SINE MIR 27 187 -21 2181 115 0 10 chr17 34564926 34565221 -50873259 - AluSx SINE Alu -20 292 1 864 118 7 29 chr17 34566458 34566594 -50871886 + FLAM_C SINE Alu 1 133 0 264 30 0 0 chr17 34566605 34566638 -50871842 + (TA)n Simple_repeat Simple_repeat 1 33 0 749 180 0 0 chr17 34567342 34567464 -50871016 - FLAM_C SINE Alu -19 124 3 1538 234 82 57 chr17 34567537 34568136 -50870344 + L1MD2 LINE L1 5743 6356 -3 223 377 9 18 chr17 34568206 34568320 -50870160 + MIR SINE MIR 35 147 -61 180 111 0 0 chr17 34568385 34568412 -50870068 + (A)n Simple_repeat Simple_repeat 1 27 0 763 156 0 25 chr17 34568482 34568604 -50869876 - FLAM_A SINE Alu -14 128 10 414 0 0 0 chr17 34568821 34568867 -50869613 + (CA)n Simple_repeat Simple_repeat 1 46 0 203 147 0 0 chr17 34571858 34571892 -50866588 + (TC)n Simple_repeat Simple_repeat 2 35 0 211 225 0 0 chr17 34572432 34572472 -50866008 + CT-rich Low_complexity Low_complexity 1 40 0 863 177 14 7 chr17 34572472 34572619 -50865861 - AluJ SINE Alu -32 280 133 499 230 93 14 chr17 34574356 34574495 -50863985 + MER103 DNA DNA 1 150 -16 2548 71 0 3 chr17 34574524 34574833 -50863647 - AluY SINE Alu -3 308 1 2295 67 0 11 chr17 34575409 34575692 -50862788 + AluY SINE Alu 1 280 -31 810 163 23 0 chr17 34576262 34576391 -50862089 - AluJ SINE Alu -170 132 1 209 255 96 53 chr17 34577202 34577296 -50861184 + MIR SINE MIR 99 196 -66 278 343 31 1 chr17 34577481 34577622 -50860858 - MIR SINE MIR -70 138 30 322 345 27 0 chr17 34578324 34578434 -50860046 - MIR SINE MIR -98 164 52 23 0 0 0 chr17 34578497 34578520 -50859960 + AT_rich Low_complexity Low_complexity 1 23 0 2125 120 7 0 chr17 34579431 34579723 -50858757 + AluSx SINE Alu 5 298 -14 2184 83 7 4 chr17 34579730 34580052 -50858428 + AluSc SINE Alu 1 323 0 2195 89 13 40 chr17 34580235 34580538 -50857942 + AluSq SINE Alu 1 295 -18 374 245 50 29 chr17 34580655 34580794 -50857686 + MER5B DNA MER1_type 2 143 -35 395 235 30 3 chr17 34581140 34581307 -50857173 + MIR SINE MIR 11 232 -30 2042 123 0 63 chr17 34581345 34581663 -50856817 + AluSx SINE Alu 1 298 -14 2467 76 0 3 chr17 34582135 34582437 -50856043 - AluSg SINE Alu -9 301 1 334 179 51 13 chr17 34583279 34583357 -50855123 + L2 LINE L2 2282 2362 -952 2200 119 3 10 chr17 34583540 34583851 -50854629 + AluSx SINE Alu 1 309 -3 1415 176 34 0 chr17 34584253 34584347 -50854133 + AluJo SINE Alu 35 124 -188 2365 93 0 3 chr17 34584347 34584647 -50853833 + AluY SINE Alu 1 299 -12 1415 176 34 0 chr17 34584647 34584791 -50853689 + AluJo SINE Alu 124 281 -31 192 77 0 0 chr17 34584796 34584822 -50853658 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 21 36 0 0 chr17 34585289 34585317 -50853163 + AT_rich Low_complexity Low_complexity 1 28 0 2325 101 3 0 chr17 34586790 34587088 -50851392 + AluSq SINE Alu 1 299 -14 526 248 59 62 chr17 34587141 34587448 -50851032 + L1MC5 LINE L1 7623 7928 -33 2161 132 0 0 chr17 34587456 34587752 -50850728 + AluSx SINE Alu 2 297 -15 2437 92 0 13 chr17 34588445 34588785 -50849695 + AluSp SINE Alu 1 336 0 1436 171 84 31 chr17 34588790 34589077 -50849403 + AluJb SINE Alu 1 302 -10 257 162 0 0 chr17 34589149 34589186 -50849294 - Alu SINE Alu -265 38 2 2054 121 0 24 chr17 34589223 34589520 -50848960 - AluSx SINE Alu -16 296 7 1858 166 0 3 chr17 34589594 34589895 -50848585 + AluJb SINE Alu 1 300 -12 28 0 0 0 chr17 34589899 34589927 -50848553 + AT_rich Low_complexity Low_complexity 1 28 0 662 191 73 59 chr17 34590238 34590442 -50848038 - L1MC5 LINE L1 -1045 6916 6710 1876 146 29 0 chr17 34591228 34591543 -50846937 + MER33 DNA MER1_type 1 324 0 1799 79 4 0 chr17 34591996 34592224 -50846256 + AluSp SINE Alu 71 299 -14 403 247 12 12 chr17 34592325 34592410 -50846070 + MER58 DNA MER1_type 9 93 -293 1029 156 0 11 chr17 34592435 34592679 -50845801 + AluSx SINE Alu 2 304 -6 1139 144 56 84 chr17 34592682 34592966 -50845514 + MER58 DNA MER1_type 2144 2419 -1 5702 153 90 74 chr17 34593138 34593621 -50844859 - Charlie1a DNA MER1_type -1307 1454 980 2100 136 0 7 chr17 34593621 34593929 -50844551 + AluSx SINE Alu 3 308 -4 5702 153 90 74 chr17 34593929 34594066 -50844414 - Charlie1a DNA MER1_type -1781 980 847 2164 127 0 19 chr17 34594066 34594380 -50844100 - AluSx SINE Alu -4 308 1 5702 153 90 74 chr17 34594380 34595166 -50843314 - Charlie1a DNA MER1_type -1914 847 24 23 54 0 0 chr17 34595873 34595910 -50842570 + AT_rich Low_complexity Low_complexity 1 37 0 223 231 92 0 chr17 34596188 34596253 -50842227 - MIR SINE MIR -101 107 37 479 309 36 6 chr17 34596264 34596432 -50842048 + MER5B DNA MER1_type 5 177 -1 701 207 21 85 chr17 34598388 34598433 -50840047 + MER5B DNA MER1_type 1 47 -131 1936 162 0 16 chr17 34598433 34598741 -50839739 - AluJb SINE Alu -9 303 1 701 207 21 85 chr17 34598741 34598883 -50839597 + MER5B DNA MER1_type 47 176 -2 1727 93 31 4 chr17 34600558 34600816 -50837664 - L1MA3 LINE L1 0 6305 6041 2096 118 7 0 chr17 34601165 34601466 -50837014 + AluSx SINE Alu 1 303 0 888 183 26 0 chr17 34601491 34601644 -50836836 + FRAM SINE Alu 3 159 -17 26 30 0 0 chr17 34601644 34601677 -50836803 + AT_rich Low_complexity Low_complexity 1 33 0 1211 129 0 0 chr17 34602533 34602704 -50835776 + AluJo SINE Alu 1 171 -141 543 200 0 0 chr17 34602706 34602806 -50835674 - AluSc SINE Alu -80 229 130 1917 142 14 0 chr17 34602809 34603098 -50835382 - AluSq SINE Alu -5 308 16 578 174 37 0 chr17 34603528 34603637 -50834843 + L1MB5 LINE L1 6062 6174 0 2544 40 24 0 chr17 34603788 34604084 -50834396 + AluY SINE Alu 1 303 -8 913 136 0 0 chr17 34605564 34605704 -50832776 + FLAM_C SINE Alu 1 140 -3 207 186 0 0 chr17 34606576 34606619 -50831861 + G-rich Low_complexity Low_complexity 1 43 0 276 289 56 0 chr17 34607176 34607266 -50831214 + MIR SINE MIR 120 214 -48 497 171 246 42 chr17 34607644 34607761 -50830719 + L1ME4a LINE L1 5819 5911 -210 2115 135 3 0 chr17 34607761 34608064 -50830416 + AluSx SINE Alu 1 304 -8 497 171 246 42 chr17 34608064 34608186 -50830294 + L1ME4a LINE L1 5911 6107 -14 236 288 0 0 chr17 34608538 34608597 -50829883 - L2 LINE L2 -673 2641 2583 225 293 250 16 chr17 34608598 34608741 -50829739 - MIR SINE MIR 0 262 154 1873 66 0 13 chr17 34608741 34608969 -50829511 + AluY SINE Alu 1 225 -86 267 79 0 0 chr17 34608969 34609007 -50829473 + (CA)n Simple_repeat Simple_repeat 1 38 0 225 293 250 16 chr17 34609007 34609050 -50829430 - MIR SINE MIR -107 155 31 202 298 214 34 chr17 34609064 34609420 -50829060 - L2 LINE L2 -864 2450 2031 263 344 119 4 chr17 34609548 34609793 -50828687 - L2 LINE L2 -1328 1986 1710 1923 151 10 0 chr17 34609793 34610085 -50828395 - AluJb SINE Alu -17 295 1 189 248 133 29 chr17 34610118 34610223 -50828257 + L2 LINE L2 2160 2275 -1039 905 178 13 7 chr17 34610299 34610445 -50828035 + FRAM SINE Alu 4 151 -10 366 23 0 0 chr17 34610445 34610488 -50827992 + (GA)n Simple_repeat Simple_repeat 2 44 0 2263 128 0 0 chr17 34610564 34610914 -50827566 + AluSx SINE Alu 1 350 0 363 228 65 41 chr17 34611016 34611139 -50827341 + MIR SINE MIR 110 235 -27 383 269 59 43 chr17 34611191 34611300 -50827180 + L2 LINE L2 2432 2547 -767 2260 85 37 0 chr17 34611300 34611594 -50826886 + AluSg1 SINE Alu 1 305 -4 383 269 59 43 chr17 34611594 34611670 -50826810 + L2 LINE L2 2547 2620 -694 2171 120 3 7 chr17 34611763 34612071 -50826409 + AluSx SINE Alu 1 307 -5 517 284 106 75 chr17 34612118 34612157 -50826323 + L2 LINE L2 2677 2713 -600 2279 90 17 0 chr17 34612157 34612447 -50826033 + AluSq SINE Alu 1 295 -18 426 53 0 0 chr17 34612447 34612504 -50825976 + (TA)n Simple_repeat Simple_repeat 1 57 0 517 284 106 75 chr17 34612504 34612848 -50825632 + L2 LINE L2 2712 3069 -244 2125 119 0 32 chr17 34612885 34613197 -50825283 - AluSg SINE Alu -8 302 1 2121 107 3 3 chr17 34613202 34613492 -50824988 - AluSp SINE Alu -5 308 19 426 184 20 20 chr17 34613768 34613866 -50824614 + LTR67 LTR ERVL 458 555 -2 661 233 78 36 chr17 34616904 34617123 -50821357 - MIR SINE MIR -14 248 21 2282 120 0 0 chr17 34619466 34619775 -50818705 - AluSx SINE Alu -3 309 1 2026 157 0 3 chr17 34620244 34620550 -50817930 - AluJb SINE Alu -7 305 1 1541 151 48 19 chr17 34620575 34620846 -50817634 - AluJo SINE Alu -20 292 14 1500 165 102 18 chr17 34620896 34621181 -50817299 - AluJo SINE Alu -3 309 1 1916 81 119 8 chr17 34621190 34621451 -50817029 - AluSg1 SINE Alu -19 290 1 249 300 55 27 chr17 34621580 34621690 -50816790 - MIR SINE MIR -76 132 20 2101 107 0 4 chr17 34621857 34622128 -50816352 - AluSg SINE Alu -40 270 1 1070 170 0 0 chr17 34622130 34622295 -50816185 - AluSg/x SINE Alu -20 290 126 2063 131 0 0 chr17 34622427 34622891 -50815589 + AluSq SINE Alu 1 313 0 2129 114 4 0 chr17 34623323 34623623 -50814857 - AluSx SINE Alu 0 301 1 21 57 0 0 chr17 34624078 34624113 -50814367 + AT_rich Low_complexity Low_complexity 1 35 0 2381 75 3 3 chr17 34624456 34624763 -50813717 + AluSg SINE Alu 1 307 -3 181 328 78 62 chr17 34624901 34625029 -50813451 + L2 LINE L2 3141 3270 -2 1188 119 0 6 chr17 34625867 34626044 -50812436 - AluSg/x SINE Alu -4 306 131 423 0 0 0 chr17 34626044 34626091 -50812389 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 2146 85 7 0 chr17 34626094 34626375 -50812105 - AluSx SINE Alu -29 283 1 287 239 186 9 chr17 34626379 34626492 -50811988 - L2 LINE L2 -632 2682 2550 187 309 25 12 chr17 34627169 34627250 -50811230 + L2 LINE L2 3009 3090 -182 361 248 190 7 chr17 34627323 34627460 -50811020 + MIR SINE MIR 91 252 -10 1698 121 0 17 chr17 34627522 34627762 -50810718 - AluSx SINE Alu -75 237 2 349 282 92 25 chr17 34627809 34627972 -50810508 + MIR SINE MIR 16 189 -73 2282 105 0 0 chr17 34628109 34628394 -50810086 - AluSx SINE Alu -27 285 1 395 277 61 7 chr17 34628475 34628623 -50809857 - MIR SINE MIR -55 207 52 429 138 0 0 chr17 34629911 34629976 -50808504 - MLT1D LTR MaLR 0 505 441 2465 66 0 16 chr17 34629977 34630281 -50808199 - AluY SINE Alu -12 299 1 2007 113 31 0 chr17 34630306 34630598 -50807882 - L1PA13 LINE L1 -16 6147 5847 29 0 0 0 chr17 34630619 34630648 -50807832 + AT_rich Low_complexity Low_complexity 1 29 0 1390 135 0 0 chr17 34630701 34630894 -50807586 + AluSx SINE Alu 1 193 -119 2266 109 0 0 chr17 34631161 34631455 -50807025 - AluSg SINE Alu -14 296 3 2300 104 0 3 chr17 34631461 34631759 -50806721 - AluSx SINE Alu -14 298 2 2440 109 0 0 chr17 34631793 34632105 -50806375 - AluSx SINE Alu 0 312 1 24 0 0 0 chr17 34632206 34632230 -50806250 + AT_rich Low_complexity Low_complexity 1 24 0 24 32 0 0 chr17 34632779 34632810 -50805670 + AT_rich Low_complexity Low_complexity 1 31 0 2044 130 3 7 chr17 34632917 34633216 -50805264 + AluSx SINE Alu 1 298 -14 546 255 91 39 chr17 34633384 34633615 -50804865 + L3 LINE CR1 1334 1576 -1 1723 168 3 49 chr17 34634289 34634616 -50803864 - AluJo SINE Alu 0 312 1 1144 206 55 41 chr17 34634987 34635279 -50803201 + AluJo SINE Alu 5 300 -2 1907 138 39 0 chr17 34636759 34637041 -50801439 - AluSx SINE Alu -19 293 1 1290 190 0 0 chr17 34637235 34637446 -50801034 + AluSx SINE Alu 29 239 -73 1462 179 0 0 chr17 34637560 34637806 -50800674 + AluJb SINE Alu 66 311 -1 1315 100 12 0 chr17 34638266 34638436 -50800044 - AluSg/x SINE Alu -15 297 126 2508 72 0 0 chr17 34638436 34638742 -50799738 - AluY SINE Alu -5 306 1 256 180 250 50 chr17 34638823 34638923 -50799557 - MIR3 SINE MIR -15 193 74 206 121 0 0 chr17 34639064 34639097 -50799383 + (T)n Simple_repeat Simple_repeat 1 33 0 190 0 67 0 chr17 34639399 34639429 -50799051 + (TA)n Simple_repeat Simple_repeat 2 33 0 257 186 52 0 chr17 34639446 34639543 -50798937 + (TA)n Simple_repeat Simple_repeat 2 103 0 916 187 25 102 chr17 34639734 34639893 -50798587 - MER20 DNA MER1_type 0 219 82 2165 114 7 3 chr17 34639893 34640190 -50798290 + AluSx SINE Alu 1 298 -14 916 187 25 102 chr17 34640190 34640265 -50798215 - MER20 DNA MER1_type -137 82 3 318 311 0 0 chr17 34641137 34641227 -50797253 + L1MC4 LINE L1 6614 6703 -1339 2892 37 0 0 chr17 34641239 34641565 -50796915 - LTR17 LTR ERV1 -454 326 1 7947 42 1 32 chr17 34641568 34642545 -50795935 - HERV17 LTR ERV1 -4 8622 7676 180 77 0 0 chr17 34643258 34643284 -50795196 + (TTAA)n Simple_repeat Simple_repeat 3 28 0 2281 98 0 0 chr17 34643284 34643569 -50794911 - AluSx SINE Alu -27 285 1 219 321 90 4 chr17 34643673 34643859 -50794621 - L2 LINE L2 -339 2974 2768 263 125 0 0 chr17 34646470 34646510 -50791970 - HSMAR1 DNA Mariner -1247 40 1 314 145 24 121 chr17 34647701 34647784 -50790696 + HAL1 LINE L1 2427 2501 -6 561 251 11 38 chr17 34647888 34648029 -50790451 + MER5B DNA MER1_type 1 137 -41 1707 169 0 36 chr17 34648029 34648330 -50790150 + AluJo SINE Alu 1 290 -22 561 251 11 38 chr17 34648330 34648371 -50790109 + MER5B DNA MER1_type 137 178 0 463 264 21 36 chr17 34648409 34648549 -50789931 + L2 LINE L2 3127 3264 -8 2376 100 3 0 chr17 34649005 34649304 -50789176 + AluSp SINE Alu 1 300 -13 254 214 180 11 chr17 34649508 34649597 -50788883 + MLT1J2 LTR MaLR 41 144 -405 290 227 76 33 chr17 34649768 34649894 -50788586 + MLT1J2 LTR MaLR 339 450 0 619 294 11 16 chr17 34650902 34651086 -50787394 + MIR SINE MIR 17 199 -63 1598 201 0 10 chr17 34651094 34651402 -50787078 + AluJb SINE Alu 1 305 -7 2172 112 0 7 chr17 34651413 34651728 -50786752 + AluSx SINE Alu 3 315 0 382 264 18 86 chr17 34651779 34651834 -50786646 - MIR SINE MIR -110 152 95 1404 209 35 39 chr17 34651834 34652117 -50786363 + AluJo SINE Alu 1 282 -30 258 105 0 0 chr17 34652120 34652158 -50786322 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 382 264 18 86 chr17 34652158 34652261 -50786219 - MIR SINE MIR -169 93 1 204 40 0 0 chr17 34652927 34652952 -50785528 + (GGGTG)n Simple_repeat Simple_repeat 3 27 0 1585 227 109 62 chr17 34653131 34653220 -50785260 + MER34 LTR ERV1 1 84 -458 1393 109 30 0 chr17 34653220 34653421 -50785059 + L1PB2 LINE L1 5940 6146 -5 1585 227 109 62 chr17 34653421 34653846 -50784634 + MER34 LTR ERV1 84 539 -3 718 229 133 30 chr17 34654151 34654422 -50784058 + MER34-int LTR ERV1 311 609 -5722 622 61 0 0 chr17 34654422 34654504 -50783976 + (TTTC)n Simple_repeat Simple_repeat 2 84 0 1910 148 3 3 chr17 34654504 34654787 -50783693 - AluSx SINE Alu -28 284 2 302 145 105 66 chr17 34654790 34654866 -50783614 + MER34-int LTR ERV1 1417 1495 -4836 591 189 87 32 chr17 34655008 34655193 -50783287 + MER31-int LTR ERV1 995 1189 -3747 287 267 11 11 chr17 34655210 34655300 -50783180 + MER5B DNA MER1_type 86 175 -3 1549 203 0 13 chr17 34656638 34656939 -50781541 - AluJb SINE Alu -15 297 1 1903 155 16 7 chr17 34656995 34657299 -50781181 - AluJb SINE Alu -1 311 5 1821 159 14 10 chr17 34657714 34657834 -50780646 + AluJo SINE Alu 1 119 -193 324 0 0 0 chr17 34657834 34657870 -50780610 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 2103 139 0 0 chr17 34657877 34658178 -50780302 + AluSx SINE Alu 1 301 -11 1821 159 14 10 chr17 34658178 34658344 -50780136 + AluJo SINE Alu 124 296 -16 2175 98 26 20 chr17 34658344 34658649 -50779831 + AluSp SINE Alu 1 307 -6 355 195 257 0 chr17 34658744 34658857 -50779623 + MIR SINE MIR 118 259 -3 417 318 93 50 chr17 34659235 34659458 -50779022 + L2 LINE L2 2509 2721 -593 2274 88 0 7 chr17 34659458 34659753 -50778727 - AluSc SINE Alu -16 293 1 2051 121 32 0 chr17 34659753 34660034 -50778446 - AluSx SINE Alu -22 290 1 417 318 93 50 chr17 34660034 34660152 -50778328 + L2 LINE L2 2720 2866 -448 623 286 83 89 chr17 34660188 34660513 -50777967 + L2 LINE L2 2948 3270 -2 1794 168 33 3 chr17 34660920 34661223 -50777257 - AluSq SINE Alu -1 312 1 2151 102 20 7 chr17 34661376 34661669 -50776811 - AluSx SINE Alu -15 297 1 13404 95 19 68 chr17 34661785 34662214 -50776266 - L1PA10 LINE L1 -24 6144 5696 2387 95 0 0 chr17 34662214 34662509 -50775971 - AluSq SINE Alu -13 300 6 13404 95 19 68 chr17 34662509 34665016 -50773464 - L1PA10 LINE L1 -472 5696 3359 1316 141 5 15 chr17 34665016 34665222 -50773258 - AluSg/x SINE Alu -32 278 75 1129 264 30 35 chr17 34665599 34665967 -50772513 - MER74B LTR ERVL -6 616 251 349 151 0 0 chr17 34666026 34666079 -50772401 - MER74B LTR ERVL -569 53 1 724 274 17 26 chr17 34666133 34666363 -50772117 - HERVL74 LTR ERVL -82 5603 5376 396 45 45 0 chr17 34666366 34666433 -50772047 + (TA)n Simple_repeat Simple_repeat 2 71 0 1882 221 72 46 chr17 34666444 34666689 -50771791 - HERVL74 LTR ERVL -461 5224 4987 1771 172 14 3 chr17 34666689 34666985 -50771495 - AluJo SINE Alu -13 299 1 1882 221 72 46 chr17 34666985 34667305 -50771175 - HERVL74 LTR ERVL -698 4987 4644 369 309 10 0 chr17 34667313 34667410 -50771070 - HERVL74 LTR ERVL -999 4686 4589 * 751 165 11 102 chr17 34667401 34667512 -50770968 - HERVL74 LTR ERVL -1612 4073 3982 1800 195 0 3 chr17 34667512 34667825 -50770655 + AluJb SINE Alu 1 312 0 751 165 11 102 chr17 34667825 34667889 -50770591 - HERVL74 LTR ERVL -1703 3982 3914 198 0 0 0 chr17 34667889 34667911 -50770569 + (CTTG)n Simple_repeat Simple_repeat 2 23 0 663 217 53 13 chr17 34667913 34668065 -50770415 - HERVL74 LTR ERVL -2042 3643 3486 * 7321 195 67 48 chr17 34668054 34669290 -50769190 - HERVL74 LTR ERVL -2345 3340 2129 2580 140 27 13 chr17 34669290 34669739 -50768741 + L1MC1 LINE L1 5879 6333 0 7321 195 67 48 chr17 34669739 34670543 -50767937 - HERVL74 LTR ERVL -3556 2129 1168 2190 116 0 25 chr17 34670543 34670862 -50767618 + AluSx SINE Alu 1 311 -1 7321 195 67 48 chr17 34670862 34671003 -50767477 - HERVL74 LTR ERVL -4517 1168 1031 3093 92 5 2 chr17 34671033 34671458 -50767022 + L1PA14 LINE L1 5735 6160 -1 2362 145 56 12 chr17 34671503 34671917 -50766563 + MSTB1 LTR MaLR 1 432 0 2272 160 46 0 chr17 34671961 34672354 -50766126 - LTR57 LTR ERVL 0 411 1 258 173 0 19 chr17 34672372 34672424 -50766056 - MER107 DNA MER1_type -79 118 68 4578 195 60 18 chr17 34672631 34673661 -50764819 + L1MDa LINE L1 1623 2725 -3815 2086 140 3 10 chr17 34673661 34673969 -50764511 + AluSx SINE Alu 1 306 -6 4578 195 60 18 chr17 34673969 34674250 -50764230 + L1MDa LINE L1 2725 2993 -3547 1086 213 29 0 chr17 34674254 34674461 -50764019 + AluJo SINE Alu 78 290 -22 1187 229 34 12 chr17 34674497 34674820 -50763660 + L1MDa LINE L1 3049 3378 -3162 192 40 0 0 chr17 34675036 34675061 -50763419 + (CGGGGG)n Simple_repeat Simple_repeat 3 27 0 10335 184 8 9 chr17 34676784 34678783 -50759697 + L1P LINE L1 981 2976 -3170 24 32 0 0 chr17 34678834 34678865 -50759615 + AT_rich Low_complexity Low_complexity 1 31 0 1731 86 40 7 chr17 34678880 34679227 -50759253 - MLT2A1 LTR ERVL -44 400 1 3651 63 6 13 chr17 34679227 34679701 -50758779 - HERVL-A1 LTR ERVL 0 5654 5184 11742 108 54 17 chr17 34679802 34681654 -50756826 - Harlequin LTR ERV1 -4976 1920 1 1892 186 50 48 chr17 34681654 34681982 -50756498 - LTR2B LTR ERV1 0 490 159 2306 108 0 0 chr17 34681982 34682277 -50756203 - AluY SINE Alu -16 295 1 1892 186 50 48 chr17 34682277 34682406 -50756074 - LTR2B LTR ERV1 -331 159 32 439 276 63 27 chr17 34683035 34683230 -50755250 + L1ME LINE L1 5477 5675 -461 22 35 0 0 chr17 34684629 34684658 -50753822 + GC_rich Low_complexity Low_complexity 1 29 0 883 107 8 0 chr17 34684700 34684822 -50753658 - FLAM_C SINE Alu -10 123 1 330 195 23 58 chr17 34685191 34685278 -50753202 - AluJ SINE Alu -100 202 119 30 0 0 0 chr17 34685279 34685309 -50753171 + AT_rich Low_complexity Low_complexity 1 30 0 2283 108 0 0 chr17 34685309 34685616 -50752864 - AluSq SINE Alu -6 307 1 802 91 99 8 chr17 34685619 34685740 -50752740 - AluJ SINE Alu -180 132 1 329 246 18 53 chr17 34686140 34686254 -50752226 + G-rich Low_complexity Low_complexity 1 110 0 712 211 20 7 chr17 34686369 34686521 -50751959 - FRAM SINE Alu -11 155 2 423 0 0 0 chr17 34686777 34686824 -50751656 + (TG)n Simple_repeat Simple_repeat 2 48 0 413 254 16 16 chr17 34687281 34687407 -50751073 - L1MA10 LINE L1 -7 6327 6202 461 140 104 116 chr17 34687420 34687525 -50750955 + MER96B DNA MER1_type? 18 123 -294 1541 167 29 7 chr17 34687525 34687852 -50750628 + AluJb SINE Alu 1 333 0 461 140 104 116 chr17 34687852 34687909 -50750571 + MER96B DNA MER1_type? 123 179 -238 226 254 75 0 chr17 34688029 34688096 -50750384 - L1M4 LINE L1 -1288 4858 4787 354 286 43 49 chr17 34688163 34688348 -50750132 - L1M4 LINE L1 -1995 4151 3968 218 140 0 20 chr17 34688795 34688845 -50749635 + (CAAAAA)n Simple_repeat Simple_repeat 5 53 0 196 281 18 0 chr17 34689784 34689841 -50748639 - L2 LINE L2 -4 3309 3252 21 0 0 0 chr17 34691309 34691330 -50747150 + AT_rich Low_complexity Low_complexity 1 21 0 331 308 10 0 chr17 34692878 34692982 -50745498 + MLT1I LTR MaLR 73 177 -232 361 277 66 24 chr17 34692982 34693148 -50745332 - L1M4 LINE L1 -2223 3923 3751 1434 191 11 15 chr17 34693173 34693446 -50745034 - AluJb SINE Alu -32 280 9 2403 76 0 0 chr17 34693635 34693937 -50744543 - AluSx SINE Alu -10 302 1 2374 62 0 3 chr17 34694507 34694795 -50743685 - AluY SINE Alu -21 290 4 180 0 0 0 chr17 34696112 34696132 -50742348 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 4012 182 43 12 chr17 34696496 34697526 -50740954 + L1P4 LINE L1 4427 5487 -679 1398 215 53 6 chr17 34697534 34697892 -50740588 + L1 LINE L1 3179 3553 -2593 988 178 41 25 chr17 34699092 34699289 -50739191 - MLT1A1 LTR MaLR 0 365 166 4068 165 77 58 chr17 34699293 34700379 -50738101 - MER52C LTR ERV1 0 1278 23 793 174 101 7 chr17 34700380 34700529 -50737951 - MLT1A1 LTR MaLR -202 163 1 2157 114 3 19 chr17 34700559 34700875 -50737605 + AluSq SINE Alu 1 311 -2 6977 102 22 11 chr17 34700910 34701905 -50736575 - LTR13 LTR ERVK 0 1007 2 320 306 91 29 chr17 34702089 34702364 -50736116 + L1M4 LINE L1 3113 3404 -2742 333 265 144 50 chr17 34704801 34704982 -50733498 - L1ME LINE L1 -460 5595 5401 732 259 59 47 chr17 34705080 34705533 -50732947 - L1ME LINE L1 -784 5296 4835 349 321 54 40 chr17 34705723 34705947 -50732533 - L1ME LINE L1 -5311 759 533 728 51 0 10 chr17 34706189 34706287 -50732193 + (TTCC)n Simple_repeat Simple_repeat 3 99 0 847 118 25 0 chr17 34706287 34706406 -50732074 - AluJb SINE Alu -190 122 1 374 308 60 41 chr17 34706448 34706766 -50731714 - L1ME LINE L1 -5660 410 87 234 143 0 0 chr17 34706766 34706815 -50731665 + (TA)n Simple_repeat Simple_repeat 2 50 0 1821 166 3 7 chr17 34706818 34707108 -50731372 - AluJb SINE Alu -23 289 1 1038 116 14 0 chr17 34707735 34707935 -50730545 - AluSg/x SINE Alu 0 340 139 2032 102 0 59 chr17 34708248 34708583 -50729897 + AluSq SINE Alu 1 317 0 419 283 105 27 chr17 34708987 34709206 -50729274 - L1M4 LINE L1 -2936 3210 2975 988 132 0 22 chr17 34709623 34709805 -50728675 + (TTTC)n Simple_repeat Simple_repeat 1 178 0 1757 88 0 4 chr17 34709818 34710045 -50728435 - AluSc SINE Alu -11 298 73 180 0 0 0 chr17 34710045 34710065 -50728415 + (A)n Simple_repeat Simple_repeat 1 20 0 21 36 0 0 chr17 34710246 34710274 -50728206 + AT_rich Low_complexity Low_complexity 1 28 0 348 115 16 0 chr17 34710274 34710335 -50728145 - L1PB1 LINE L1 0 6151 6090 32723 97 9 8 chr17 34710337 34715934 -50722546 - L1PA7 LINE L1 -11 7581 1148 292 308 0 0 chr17 34715957 34716048 -50722432 + HsTC2 DNA Tc2 36 126 -1772 1939 153 3 0 chr17 34716235 34716529 -50721951 - AluJb SINE Alu -17 295 1 260 319 88 0 chr17 34716912 34717003 -50721477 - MIR SINE MIR -62 200 102 1711 35 5 10 chr17 34718055 34718256 -50720224 - L1PA4 LINE L1 -5 6150 5951 1389 184 26 71 chr17 34718295 34718605 -50719875 - AluJb SINE Alu -16 296 1 1906 181 70 5 chr17 34718730 34719129 -50719351 - L1MC3 LINE L1 -7 7778 7354 1101 199 61 64 chr17 34719129 34719425 -50719055 - MER49 LTR ERV1 0 923 627 2115 115 3 7 chr17 34719425 34719720 -50718760 - AluSx SINE Alu -18 294 1 1101 199 61 64 chr17 34719720 34719765 -50718715 - MER49 LTR ERV1 -296 627 583 3835 158 5 2 chr17 34719766 34720375 -50718105 - MER49 LTR ERV1 -304 619 9 1667 204 89 33 chr17 34720384 34720811 -50717669 - L1MC3 LINE L1 -429 7356 6906 7843 84 10 9 chr17 34720813 34721616 -50716864 - L1PA8 LINE L1 0 6172 5371 2162 121 3 0 chr17 34721616 34721913 -50716567 - AluSx SINE Alu -14 298 1 7843 84 10 9 chr17 34721913 34722956 -50715524 - L1PA8 LINE L1 -801 5371 4316 628 119 129 0 chr17 34722956 34723057 -50715423 - L1MD3 LINE L1 -1168 6827 6714 1159 229 35 3 chr17 34723121 34723435 -50715045 + MER33 DNA MER1_type 1 324 0 1155 174 27 49 chr17 34723500 34723724 -50714756 + MER20 DNA MER1_type 1 219 0 2396 84 7 3 chr17 34724241 34724549 -50713931 + AluSq SINE Alu 1 309 -4 894 176 6 6 chr17 34724551 34724727 -50713753 + AluSg/x SINE Alu 135 310 0 208 198 12 99 chr17 34726071 34726152 -50712328 + MIR3 SINE MIR 110 183 -25 185 271 0 51 chr17 34726837 34726896 -50711584 + MIR SINE MIR 58 113 -95 2405 78 0 7 chr17 34727517 34727824 -50710656 + AluY SINE Alu 1 305 -6 1062 41 0 0 chr17 34727910 34728033 -50710447 + AluY SINE Alu 181 303 -8 192 40 0 0 chr17 34728163 34728188 -50710292 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 1106 165 147 27 chr17 34728402 34728572 -50709908 - AluJo SINE Alu 0 315 106 348 24 0 0 chr17 34728572 34728613 -50709867 + (TG)n Simple_repeat Simple_repeat 2 42 0 1106 165 147 27 chr17 34728613 34728699 -50709781 - AluJo SINE Alu -209 106 32 2748 183 60 1 chr17 34729439 34729986 -50708494 - L1MB7 LINE L1 -19 6165 5581 2412 68 0 3 chr17 34730187 34730481 -50707999 + AluY SINE Alu 1 293 -18 24 53 0 0 chr17 34730488 34730526 -50707954 + AT_rich Low_complexity Low_complexity 1 38 0 2190 92 0 7 chr17 34731537 34731819 -50706661 + AluY SINE Alu 1 280 -31 2216 177 94 24 chr17 34731819 34732277 -50706203 - LTR2B LTR ERV1 0 490 1 39170 89 14 13 chr17 34732277 34738001 -50700479 - Harlequin LTR ERV1 0 6896 1169 7897 67 4 0 chr17 34738101 34739075 -50699405 - HERVL-A1 LTR ERVL -558 5096 4119 8622 62 10 0 chr17 34739078 34740140 -50698340 - HERVL-A1 LTR ERVL -4581 1073 1 3358 84 18 11 chr17 34740140 34740581 -50697899 - MLT2A1 LTR ERVL 0 444 1 1315 246 134 0 chr17 34740582 34740896 -50697584 + L1ME1 LINE L1 5682 6065 -101 273 29 0 0 chr17 34740896 34740930 -50697550 + (TG)n Simple_repeat Simple_repeat 1 34 0 1315 246 134 0 chr17 34740930 34741025 -50697455 + L1ME1 LINE L1 6065 6146 -20 1959 141 0 17 chr17 34741309 34741606 -50696874 - AluJb SINE Alu -20 292 1 305 283 69 0 chr17 34741700 34741845 -50696635 - L1M4 LINE L1 -1197 4949 4795 236 250 31 10 chr17 34741930 34742026 -50696454 - L1M4 LINE L1 -1492 4654 4557 863 98 0 0 chr17 34742033 34742145 -50696335 - AluSq SINE Alu -17 296 185 519 62 0 0 chr17 34742145 34742209 -50696271 - AluSq SINE Alu -215 98 35 21 0 0 0 chr17 34742261 34742282 -50696198 + AT_rich Low_complexity Low_complexity 1 21 0 495 254 166 16 chr17 34742377 34742570 -50695910 + LTR50 LTR ERVL 574 795 0 351 278 39 53 chr17 34742649 34742930 -50695550 + L1M4 LINE L1 4101 4377 -1769 1565 236 40 69 chr17 34742957 34743348 -50695132 - L1MEc LINE L1 -4279 2117 1717 2321 67 0 3 chr17 34743348 34743631 -50694849 + AluSq SINE Alu 1 282 -31 251 28 28 0 chr17 34743634 34743670 -50694810 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 1565 236 40 69 chr17 34743670 34743842 -50694638 - L1MEc LINE L1 -4681 1715 1566 320 250 83 88 chr17 34743931 34744147 -50694333 + L1ME4a LINE L1 5833 6047 -74 1345 138 46 72 chr17 34744776 34744961 -50693519 - AluJb SINE Alu -15 297 122 279 0 0 0 chr17 34744961 34744992 -50693488 + (TTG)n Simple_repeat Simple_repeat 3 33 0 1345 138 46 72 chr17 34744992 34745111 -50693369 - AluJb SINE Alu -190 122 1 1132 178 158 0 chr17 34745853 34745972 -50692508 + AluJo SINE Alu 1 100 -212 254 50 25 0 chr17 34745972 34746012 -50692468 + (TAA)n Simple_repeat Simple_repeat 2 42 0 1132 178 158 0 chr17 34746012 34746133 -50692347 + AluJo SINE Alu 100 279 -33 271 23 45 23 chr17 34746135 34746179 -50692301 + (CAAAA)n Simple_repeat Simple_repeat 1 45 0 316 335 93 6 chr17 34747402 34747584 -50690896 - MIR SINE MIR -14 248 51 280 313 93 70 chr17 34747663 34747877 -50690603 + L2 LINE L2 1881 2099 -1215 282 335 112 58 chr17 34748008 34748286 -50690194 + L2 LINE L2 2980 3272 0 329 344 17 28 chr17 34750413 34750593 -50687887 - MER5B DNA MER1_type 0 178 1 2322 67 0 0 chr17 34751294 34751608 -50686872 + AluY SINE Alu 1 314 0 996 249 98 30 chr17 34753527 34753896 -50684584 - L1MEc LINE L1 -5649 556 163 2220 113 10 0 chr17 34754260 34754562 -50683918 + AluSx SINE Alu 1 305 -7 1133 180 86 112 chr17 34754700 34755084 -50683396 + MLT1B LTR MaLR 1 374 -16 27 29 0 0 chr17 34755631 34755665 -50682815 + AT_rich Low_complexity Low_complexity 1 34 0 936 173 12 23 chr17 34755909 34756082 -50682398 - FRAM SINE Alu -10 166 1 388 169 102 36 chr17 34756191 34756303 -50682177 - L1MC3 LINE L1 -1 7778 6254 21 0 0 0 chr17 34756575 34756596 -50681884 + AT_rich Low_complexity Low_complexity 1 21 0 1072 206 61 16 chr17 34756599 34756846 -50681634 + AluJo SINE Alu 42 299 -13 2102 200 67 21 chr17 34756954 34757533 -50680947 - L1MC4 LINE L1 -139 7903 7298 189 0 0 0 chr17 34757534 34757555 -50680925 + (TG)n Simple_repeat Simple_repeat 1 21 0 330 288 89 14 chr17 34757622 34757768 -50680712 + L1M4 LINE L1 2750 2906 -3240 517 246 36 36 chr17 34757866 34758086 -50680394 + L1M4 LINE L1 3611 3830 -2316 726 204 17 17 chr17 34758094 34758270 -50680210 + AluJo SINE Alu 120 295 -17 600 235 16 22 chr17 34758270 34758453 -50680027 + L1M4 LINE L1 3844 4025 -2121 1308 167 23 0 chr17 34758459 34758574 -50679906 + AluJo SINE Alu 7 118 -194 204 40 0 0 chr17 34758574 34758599 -50679881 + (TAAAA)n Simple_repeat Simple_repeat 2 26 0 1308 167 23 0 chr17 34758599 34758704 -50679776 + AluJo SINE Alu 118 232 -80 1240 152 116 83 chr17 34759132 34759434 -50679046 - AluJb SINE Alu 0 312 1 2073 122 0 25 chr17 34759442 34759507 -50678973 - AluSq SINE Alu 0 584 519 1017 88 6 28 chr17 34759507 34759689 -50678791 + (TTCC)n Simple_repeat Simple_repeat 3 180 0 2073 122 0 25 chr17 34759689 34760034 -50678446 - AluSq SINE Alu -65 519 1 3174 95 95 6 chr17 34761337 34761851 -50676629 + MER51A LTR ERV1 75 634 0 1052 80 34 46 chr17 34761851 34762026 -50676454 + MER51A-int LTR ERV1 1 173 -7643 * 4128 166 9 23 chr17 34762017 34762814 -50675666 + MER51A-int LTR ERV1 329 1114 -6702 1830 91 115 3 chr17 34762813 34763109 -50675371 + MER57-int LTR ERV1 5610 5938 -1599 * 3606 115 46 5 chr17 34763107 34763672 -50674808 + MER57-int LTR ERV1 6560 7147 -390 507 114 80 0 chr17 34763675 34763763 -50674717 + LTR54B LTR ERV1 5 99 -399 555 78 22 22 chr17 34763763 34763853 -50674627 + MER57-int LTR ERV1 7265 7354 -183 303 299 41 21 chr17 34765805 34765902 -50672578 + L1ME LINE L1 5552 5650 -471 285 222 119 24 chr17 34766266 34766392 -50672088 + L1ME LINE L1 5706 5843 -278 258 318 0 0 chr17 34766686 34766749 -50671731 + L1M4c LINE L1 173 235 -6078 581 262 133 36 chr17 34767180 34767542 -50670938 + L1M4c LINE L1 540 936 -5448 * 4852 155 20 37 chr17 34767539 34768753 -50669727 + L1MA8 LINE L1 4926 6113 -178 1559 214 0 30 chr17 34768753 34769056 -50669424 - AluJo SINE Alu -18 294 1 4852 155 20 37 chr17 34769056 34769230 -50669250 + L1MA8 LINE L1 6113 6288 -3 214 124 103 69 chr17 34769537 34769682 -50668798 + (CTTAA)n Simple_repeat Simple_repeat 1 150 0 1819 185 48 11 chr17 34770008 34770360 -50668120 - MLT1A1 LTR MaLR 0 365 1 2336 72 0 10 chr17 34772222 34772527 -50665953 + AluSc SINE Alu 1 302 -7 2316 74 0 3 chr17 34772803 34773131 -50665349 - AluSx SINE Alu 0 328 2 274 321 0 37 chr17 34773981 34774143 -50664337 - MLT1K LTR MaLR -13 575 420 930 266 45 42 chr17 34774173 34774925 -50663555 - L1ME LINE L1 -413 5826 5078 1406 167 31 0 chr17 34774945 34775173 -50663307 + AluSx SINE Alu 49 283 -29 237 108 0 0 chr17 34775179 34775216 -50663264 + (CAAA)n Simple_repeat Simple_repeat 3 39 0 2151 134 15 50 chr17 34775371 34775774 -50662706 - Tigger2a DNA MER2_type -45 389 1 1556 283 86 35 chr17 34775843 34776524 -50661956 - L1ME LINE L1 -1389 4826 4056 648 59 0 0 chr17 34776524 34776609 -50661871 + L1PA6 LINE L1 6068 6152 -2 1556 283 86 35 chr17 34776609 34777122 -50661358 - L1ME LINE L1 -2159 4056 3571 772 246 6 0 chr17 34777130 34777301 -50661179 - AluJo SINE Alu -21 291 120 5628 162 13 3 chr17 34777550 34779462 -50659018 - L1PB2 LINE L1 -2 6149 4219 4950 165 29 14 chr17 34779463 34780284 -50658196 - L1 LINE L1 -1519 4627 3786 2262 113 0 3 chr17 34780284 34780593 -50657887 - AluSq SINE Alu -5 308 1 4950 165 29 14 chr17 34780593 34780810 -50657670 - L1 LINE L1 -2360 3786 3574 636 289 106 85 chr17 34780810 34781518 -50656962 - L1ME LINE L1 -5038 1358 636 302 314 84 50 chr17 34781723 34781962 -50656518 + L1MC4a LINE L1 5904 6150 -1658 356 251 62 78 chr17 34782756 34782865 -50655615 + MIR3 SINE MIR 1 110 -152 1051 171 0 0 chr17 34782865 34783029 -50655451 - FRAM SINE Alu -2 164 1 356 251 62 78 chr17 34783029 34783141 -50655339 + MIR3 SINE MIR 110 220 -42 366 245 38 19 chr17 34783217 34783323 -50655157 + HsTC2 DNA Tc2 4 111 -1787 4944 170 31 12 chr17 34783666 34784406 -50654074 + L1MA9 LINE L1 4859 5584 -728 1565 211 0 13 chr17 34784406 34784709 -50653771 + AluJo SINE Alu 2 300 -12 4944 170 31 12 chr17 34784709 34784885 -50653595 + L1MA9 LINE L1 5584 5755 -557 288 0 0 0 chr17 34784885 34784917 -50653563 + (CA)n Simple_repeat Simple_repeat 2 33 0 4944 170 31 12 chr17 34784917 34785419 -50653061 + L1MA9 LINE L1 5755 6308 -4 1291 178 147 8 chr17 34785594 34785853 -50652627 - AluJb SINE Alu -7 295 1 692 168 92 0 chr17 34786120 34786239 -50652241 - FLAM_A SINE Alu -3 130 1 636 244 69 20 chr17 34787020 34787266 -50651214 + HAL1b LINE L1 403 660 -688 239 54 0 0 chr17 34787827 34787864 -50650616 - MER74B LTR ERVL -585 37 1 741 281 9 9 chr17 34787921 34788149 -50650331 - HERVL74 LTR ERVL -82 5603 5376 697 224 127 16 chr17 34788163 34788408 -50650072 - HERVL74 LTR ERVL -452 5233 4962 1499 204 7 0 chr17 34788409 34788688 -50649792 - AluJo SINE Alu -4 308 28 2266 211 58 31 chr17 34788688 34789079 -50649401 - HERVL74 LTR ERVL -4001 1684 1268 2289 91 0 0 chr17 34789079 34789365 -50649115 - AluSq SINE Alu -23 290 5 2266 211 58 31 chr17 34789365 34789593 -50648887 - HERVL74 LTR ERVL -4417 1268 1048 1227 236 31 45 chr17 34790491 34790651 -50647829 - L1M4 LINE L1 -2251 3895 3734 1636 179 45 14 chr17 34790651 34790942 -50647538 + AluJb SINE Alu 1 300 -12 1227 236 31 45 chr17 34790942 34791204 -50647276 - L1M4 LINE L1 -2412 3734 3479 737 64 36 9 chr17 34791295 34791405 -50647075 - LTR46 LTR ERV1 0 460 348 34399 40 35 2 chr17 34791406 34795900 -50642580 + L1P LINE L1 1 4642 -1504 1673 167 20 36 chr17 34797388 34797693 -50640787 + AluJb SINE Alu 1 300 -12 1772 183 71 27 chr17 34798837 34799275 -50639205 + LTR2B LTR ERV1 34 490 0 180 0 0 0 chr17 34799275 34799295 -50639185 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 1061 200 32 60 chr17 34799299 34799549 -50638931 - AluJo SINE Alu -30 282 40 3707 177 50 18 chr17 34799882 34801016 -50637464 + L1MC/D LINE L1 1817 2982 -3558 1311 174 5 0 chr17 34801030 34801248 -50637232 + AluJo SINE Alu 87 305 -7 1749 208 45 60 chr17 34801299 34801722 -50636758 + L1MC/D LINE L1 3029 3457 -3083 2642 171 18 37 chr17 34801722 34802237 -50636243 + MLT1D LTR MaLR 1 505 0 1749 208 45 60 chr17 34802237 34802251 -50636229 + L1MC/D LINE L1 3457 3470 -3070 2333 100 7 7 chr17 34802251 34802561 -50635919 + AluSx SINE Alu 1 310 -2 1749 208 45 60 chr17 34802561 34802816 -50635664 + L1MC/D LINE L1 3470 3711 -2829 1085 141 22 5 chr17 34802817 34803115 -50635365 + LTR46 LTR ERV1 1 356 -104 7645 25 0 0 chr17 34803115 34804216 -50634264 - L1PA3 LINE L1 -2 6153 5052 1990 175 92 46 chr17 34804316 34804616 -50633864 + L1MC/D LINE L1 5501 5786 -1157 1979 129 0 7 chr17 34804616 34804926 -50633554 - AluSq SINE Alu 0 308 1 1990 175 92 46 chr17 34804926 34805296 -50633184 + L1MC/D LINE L1 5786 6200 -743 6785 151 29 75 chr17 34805301 34806843 -50631637 - MER109 Unknown Unknown -211 2221 751 8578 189 260 24 chr17 34806893 34811692 -50626788 + L1P4 LINE L1 833 6964 -635 2173 120 7 3 chr17 34811692 34811992 -50626488 + AluSx SINE Alu 1 301 -11 8578 189 260 24 chr17 34811992 34812367 -50626113 + L1P4 LINE L1 6964 7249 -350 887 273 104 28 chr17 34813722 34814077 -50624403 - L1ME LINE L1 -5662 408 27 282 130 93 0 chr17 34814353 34814407 -50624073 - L1MC5 LINE L1 -1220 6741 6683 1191 182 39 113 chr17 34814585 34814975 -50623505 + MLT1A2 LTR MaLR 1 361 -13 26 50 0 0 chr17 34815529 34815569 -50622911 + AT_rich Low_complexity Low_complexity 1 40 0 987 150 0 14 chr17 34815802 34815949 -50622531 - FRAM SINE Alu -20 156 12 2695 176 38 55 chr17 34816083 34816182 -50622298 - L1MC3 LINE L1 -1 7784 7685 522 0 0 0 chr17 34816182 34816240 -50622240 + (TTTTA)n Simple_repeat Simple_repeat 2 59 0 1458 203 0 14 chr17 34816240 34816516 -50621964 - AluJo SINE Alu -32 280 9 2695 176 38 55 chr17 34816516 34816635 -50621845 - L1MC3 LINE L1 -99 7686 7567 2629 51 0 6 chr17 34816635 34816946 -50621534 - AluY SINE Alu -2 309 1 2695 176 38 55 chr17 34816946 34817326 -50621154 - L1MC3 LINE L1 -218 7567 7194 285 207 0 17 chr17 34817330 34817388 -50621092 - MLT1F1 LTR MaLR -466 101 45 491 165 25 25 chr17 34817431 34817552 -50620928 - L1MC3 LINE L1 -746 7039 6919 2074 141 0 10 chr17 34817585 34817889 -50620591 + AluSx SINE Alu 5 305 -7 2690 126 29 79 chr17 34817966 34818484 -50619996 - L1MA9 LINE L1 -196 6116 5625 403 234 32 0 chr17 34818509 34818603 -50619877 - LTR43 LTR ERV1 -505 97 1 1514 162 54 11 chr17 34818621 34818899 -50619581 - AluJo SINE Alu -5 307 18 763 188 21 14 chr17 34818901 34819045 -50619435 - AluJo SINE Alu -163 149 5 295 234 0 53 chr17 34819440 34819534 -50618946 + GA-rich Low_complexity Low_complexity 5 93 0 1038 164 0 0 chr17 34819660 34819825 -50618655 - AluJb SINE Alu -17 295 131 463 278 0 0 chr17 34820609 34820735 -50617745 - L1MA10 LINE L1 -7 6327 6202 435 312 116 0 chr17 34821329 34821518 -50616962 + MLT1J LTR MaLR 102 312 -199 1112 291 18 24 chr17 34821556 34821915 -50616565 + MLT1I LTR MaLR 74 409 0 230 263 25 12 chr17 34821915 34821995 -50616485 + MLT1I-int LTR MaLR 1 81 -1654 294 67 0 0 chr17 34822860 34822905 -50615575 + Alu SINE Alu 256 300 0 3070 140 16 56 chr17 34822955 34823086 -50615394 + L1 LINE L1 4106 4241 -1905 7109 81 28 0 chr17 34823086 34823959 -50614521 - MER11D LTR ERVK 0 897 1 3070 140 16 56 chr17 34823959 34824090 -50614390 + L1 LINE L1 4241 4376 -1770 2138 140 3 0 chr17 34824090 34824397 -50614083 + AluSq SINE Alu 1 308 -5 3070 140 16 56 chr17 34824397 34824754 -50613726 + L1 LINE L1 4376 4701 -1445 34 24 0 0 chr17 34824904 34824945 -50613535 + AT_rich Low_complexity Low_complexity 1 41 0 1790 112 31 42 chr17 34825789 34826075 -50612405 + AluJo SINE Alu 1 283 -29 472 324 138 39 chr17 34826114 34826549 -50611931 + L2 LINE L2 1366 1843 -1471 231 293 98 30 chr17 34826631 34826764 -50611716 - MIR SINE MIR -70 192 51 330 194 38 198 chr17 34826817 34827105 -50611375 + L2 LINE L2 1858 2099 -1215 277 336 94 66 chr17 34827238 34827524 -50610956 + L2 LINE L2 2979 3272 0 1908 217 33 7 chr17 34828900 34829319 -50609161 - MER63B DNA MER1_type 0 436 7 2072 110 39 0 chr17 34829350 34829631 -50608849 + AluSx SINE Alu 1 292 -20 848 227 12 0 chr17 34829758 34829921 -50608559 + FRAM SINE Alu 1 165 -11 872 167 0 0 chr17 34830432 34830558 -50607922 - FRAM SINE Alu -47 129 4 232 363 23 29 chr17 34831385 34831556 -50606924 + MER5A DNA MER1_type 16 185 -4 225 348 0 0 chr17 34831860 34831929 -50606551 - MIR SINE MIR -86 122 54 1120 182 0 0 chr17 34832354 34832513 -50605967 - FRAM SINE Alu -7 159 1 251 286 115 47 chr17 34832640 34833221 -50605259 + L1M4 LINE L1 3808 4428 -1718 261 131 56 0 chr17 34833434 34833541 -50604939 + (TA)n Simple_repeat Simple_repeat 1 113 0 216 129 0 65 chr17 34833541 34833603 -50604877 + (TTTTTA)n Simple_repeat Simple_repeat 2 59 0 316 83 48 12 chr17 34833605 34833689 -50604791 + (TA)n Simple_repeat Simple_repeat 1 87 0 445 285 78 22 chr17 34833864 34834183 -50604297 + L1M4 LINE L1 4943 5279 -867 7534 159 50 5 chr17 34834289 34836679 -50601801 + L1PB1 LINE L1 1566 4069 -2793 1895 189 77 34 chr17 34836680 34837120 -50601360 - LTR2B LTR ERV1 0 490 32 2013 204 7 9 chr17 34837137 34837568 -50600912 + L1PB1 LINE L1 4065 4494 -2368 2968 207 2 5 chr17 34837569 34838192 -50600288 - L1 LINE L1 -903 5243 4623 7582 174 10 10 chr17 34838193 34838806 -50599674 + L1PB1 LINE L1 4500 5111 -1756 254 95 24 0 chr17 34838806 34838848 -50599632 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 7582 174 10 10 chr17 34838848 34840252 -50598228 + L1PB1 LINE L1 5111 6519 -348 531 82 0 0 chr17 34840252 34840325 -50598155 + (TA)n Simple_repeat Simple_repeat 2 74 0 7582 174 10 10 chr17 34840325 34840662 -50597818 + L1PB1 LINE L1 6519 6854 -13 568 256 151 4 chr17 34840758 34840996 -50597484 - L1MEc LINE L1 -4280 2116 1844 212 182 45 0 chr17 34842700 34842744 -50595736 + L2 LINE L2 3150 3195 -77 91 19 0 0 chr17 34843030 34843135 -50595345 + AT_rich Low_complexity Low_complexity 1 105 0 21 71 0 0 chr17 34843308 34843350 -50595130 + AT_rich Low_complexity Low_complexity 1 42 0 752 245 37 84 chr17 34843516 34843814 -50594666 - L1MEc LINE L1 -4547 1849 1566 215 158 0 18 chr17 34844871 34844928 -50593552 + GA-rich Low_complexity Low_complexity 4 59 0 210 175 32 32 chr17 34845319 34845382 -50593098 + (GGGTG)n Simple_repeat Simple_repeat 3 65 0 1189 88 0 6 chr17 34845963 34846122 -50592358 - L1MA2 LINE L1 0 6304 6147 216 0 0 0 chr17 34846128 34846152 -50592328 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 11659 142 29 4 chr17 34846152 34849169 -50589311 - L1MA1 LINE L1 -10 7711 4619 8103 162 38 7 chr17 34849160 34850515 -50587965 - L1MA1 LINE L1 -5981 1584 188 * 276 264 0 0 chr17 34850963 34851031 -50587449 - MIR SINE MIR -120 88 21 1783 174 10 7 chr17 34851663 34851961 -50586519 - AluJb SINE Alu -13 299 1 1129 198 69 16 chr17 34852734 34852981 -50585499 + AluJo SINE Alu 42 301 -11 2562 205 64 7 chr17 34853089 34853664 -50584816 - L1MC4 LINE L1 -139 7903 7296 6771 141 71 15 chr17 34853684 34855014 -50583466 + L1PBa LINE L1 1698 3104 -3758 22741 100 7 17 chr17 34855020 34861500 -50576980 + L1PA7 LINE L1 1 6467 -2 9168 208 19 9 chr17 34861475 34862957 -50575523 + L1 LINE L1 2672 4138 -2323 * 2308 84 3 17 chr17 34862957 34863255 -50575225 + AluSp SINE Alu 1 294 -19 9168 208 19 9 chr17 34863255 34863790 -50574690 + L1 LINE L1 4138 4712 -1749 186 71 0 0 chr17 34863790 34863818 -50574662 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 381 204 29 68 chr17 34863823 34863926 -50574554 - L1P LINE L1 -2048 4098 4000 * 382 241 46 0 chr17 34863910 34863997 -50574483 + L1ME LINE L1 5693 5783 -383 2924 102 14 9 chr17 34864007 34864427 -50574053 - L1MA2 LINE L1 -4 6300 5879 2657 145 57 14 chr17 34864427 34864869 -50573611 - LOR1b LTR ERV1 0 461 1 666 121 0 0 chr17 34864869 34864960 -50573520 - LOR1b-int LTR ERV1 0 8120 8030 622 93 12 0 chr17 34864959 34865045 -50573435 - LOR1b-int LTR ERV1 -2056 6064 5978 * 1945 170 170 166 chr17 34865045 34865541 -50572939 + LTR28 LTR ERV1 12 505 -515 2082 110 3 23 chr17 34865541 34865842 -50572638 - AluSg SINE Alu -15 295 1 1945 170 170 166 chr17 34865842 34866350 -50572130 + LTR28 LTR ERV1 505 1020 0 3923 106 16 24 chr17 34866350 34866974 -50571506 - LOR1b-int LTR ERV1 -2658 5462 4844 2029 150 61 22 chr17 34866977 34867404 -50571076 - MER51A LTR ERV1 0 634 193 1603 161 12 0 chr17 34867440 34867688 -50570792 - LOR1b-int LTR ERV1 0 7816 7566 2029 146 9 0 chr17 34867688 34868242 -50570238 + L1P5 LINE L1 4993 5552 -599 1179 174 5 0 chr17 34868245 34868446 -50570034 - L1 LINE L1 -2111 4035 3834 498 135 108 0 chr17 34868446 34868520 -50569960 - AluJ/FLAM SINE Alu -230 82 1 345 150 0 167 chr17 34868520 34868554 -50569926 - L1 LINE L1 -2922 3224 3186 2326 78 0 0 chr17 34868554 34868872 -50569608 + AluY SINE Alu 1 318 0 345 150 0 167 chr17 34868872 34868956 -50569524 - L1 LINE L1 -2960 3186 3125 3965 149 100 0 chr17 34868959 34869601 -50568879 + L1PB1 LINE L1 1464 2169 -5396 1004 129 32 7 chr17 34869603 34869758 -50568722 + MSTA LTR MaLR 1 159 -269 1216 152 0 0 chr17 34869763 34869967 -50568513 + MST-int LTR MaLR 49 252 -1399 3228 109 47 51 chr17 34869967 34870038 -50568442 + LOR1-int LTR ERV1 4661 4731 -3389 2260 111 7 0 chr17 34870038 34870344 -50568136 + AluSp SINE Alu 1 308 -5 3228 109 47 51 chr17 34870344 34870824 -50567656 + LOR1-int LTR ERV1 4731 5210 -2910 256 286 12 12 chr17 34870792 34870876 -50567604 + LOR1-int LTR ERV1 5903 5986 -543 * 5277 172 43 19 chr17 34870878 34872583 -50565897 + L1PB1 LINE L1 5467 7210 -360 269 241 23 0 chr17 34872627 34872714 -50565766 + L1MC4 LINE L1 6615 6703 -1339 1311 81 14 48 chr17 34872716 34872926 -50565554 + L1P5 LINE L1 5309 5511 -640 225 226 0 0 chr17 34872918 34872980 -50565500 + L1MC4 LINE L1 6642 6703 -1339 * 2380 142 6 6 chr17 34872991 34873357 -50565123 + L1PB1 LINE L1 7202 7567 -3 1370 114 24 63 chr17 34873368 34873622 -50564858 + L1MC1 LINE L1 6085 6328 -5 336 343 46 52 chr17 34873626 34873932 -50564548 + HAL1b LINE L1 98 401 -947 1671 148 0 67 chr17 34873945 34874242 -50564238 + AluJo SINE Alu 22 298 -14 473 266 184 37 chr17 34874260 34874614 -50563866 + L1PA12 LINE L1 10 415 -7166 230 296 80 45 chr17 34874718 34874917 -50563563 + L1PA12 LINE L1 1873 2078 -5503 8446 176 50 15 chr17 34876186 34877895 -50560585 + L1PBb LINE L1 403 2263 -3940 4190 111 33 4 chr17 34877883 34878581 -50559899 + L1M1 LINE L1 2520 3238 -4322 * 1686 203 0 0 chr17 34878581 34878871 -50559609 - AluJb SINE Alu -22 290 1 804 212 6 6 chr17 34878874 34879039 -50559441 - L1 LINE L1 -3773 2373 2209 269 26 26 0 chr17 34879042 34879080 -50559400 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 15917 102 6 1 chr17 34879080 34882015 -50556465 - L1PA7 LINE L1 -12 6142 3191 5686 69 31 0 chr17 34882015 34882715 -50555765 - LTR30 LTR ERV1 0 722 1 7381 107 31 4 chr17 34882718 34883748 -50554732 - HERV30 LTR ERV1 -3 8254 7197 * 10898 87 1 13 chr17 34883741 34885154 -50553326 - HERV30 LTR ERV1 -5111 3146 1751 16199 134 11 106 chr17 34885154 34888567 -50549913 - L1PA7 LINE L1 -3057 3089 1 16920 85 18 9 chr17 34888567 34888708 -50549772 - LTR19A-int LTR ERV1 -3080 2506 2368 2500 82 0 0 chr17 34888708 34889013 -50549467 - AluY SINE Alu -6 305 1 16920 85 18 9 chr17 34889013 34890988 -50547492 - LTR19A-int LTR ERV1 -3218 2368 295 405 39 0 0 chr17 34890988 34891039 -50547441 + (GA)n Simple_repeat Simple_repeat 2 52 0 16920 85 18 9 chr17 34891039 34891337 -50547143 - LTR19A-int LTR ERV1 -5291 295 1 2102 109 23 4 chr17 34891337 34891775 -50546705 - LTR19A LTR ERV1 0 486 1 5302 94 13 0 chr17 34891775 34892476 -50546004 - THE1A-int LTR MaLR -870 710 1 2661 100 17 0 chr17 34892476 34892825 -50545655 - THE1A LTR MaLR 0 355 1 1665 167 25 2 chr17 34892825 34893318 -50545162 - L1M2 LINE L1 -725 5566 5065 6929 184 49 7 chr17 34894468 34894662 -50543818 - L1P5 LINE L1 -643 5513 5329 201 74 0 0 chr17 34894662 34894689 -50543791 + (TTG)n Simple_repeat Simple_repeat 1 27 0 6929 184 49 7 chr17 34894689 34895546 -50542934 - L1P5 LINE L1 -827 5329 4368 183 80 0 0 chr17 34895546 34895571 -50542909 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 6929 184 49 7 chr17 34895571 34896081 -50542399 - L1P5 LINE L1 -1788 4368 3881 2779 151 52 23 chr17 34896864 34897381 -50541099 - L1MB7 LINE L1 -2 6182 5651 1549 189 36 17 chr17 34897410 34897711 -50540769 - AluJo SINE Alu -5 307 1 9028 209 38 33 chr17 34897712 34898426 -50540054 - L1MB7 LINE L1 -944 5202 4493 1914 166 0 7 chr17 34898426 34898721 -50539759 - AluJb SINE Alu -19 293 1 9028 209 38 33 chr17 34898721 34900311 -50538169 - L1MB7 LINE L1 -1653 4493 2885 1287 183 133 76 chr17 34900311 34900678 -50537802 - MLT1B LTR MaLR 0 390 3 1916 110 51 0 chr17 34901315 34901569 -50536911 - AluSg SINE Alu -43 267 1 339 111 0 0 chr17 34901670 34901724 -50536756 + MADE1 DNA Mariner 27 80 0 560 173 20 0 chr17 34901850 34901974 -50536506 + L1PB1 LINE L1 5660 5790 -361 197 208 0 19 chr17 34901974 34902027 -50536453 + (TATG)n Simple_repeat Simple_repeat 2 53 0 241 174 0 0 chr17 34902029 34902075 -50536405 - LTR66 LTR ERVL -171 439 394 276 149 0 0 chr17 34902075 34902122 -50536358 + (TA)n Simple_repeat Simple_repeat 1 47 0 2752 88 3 24 chr17 34902122 34902499 -50535981 + L1PB1 LINE L1 5782 6150 -1 365 237 93 34 chr17 34902588 34902706 -50535774 - MER5A DNA MER1_type -56 133 9 230 214 18 18 chr17 34902763 34902819 -50535661 + MER5A DNA MER1_type 120 175 -14 385 218 38 45 chr17 34902875 34902895 -50535585 - LTR33 LTR ERVL -9 512 493 1068 202 202 35 chr17 34902895 34903267 -50535213 + MER57B LTR ERV1 1 434 0 385 218 38 45 chr17 34903267 34903379 -50535101 - LTR33 LTR ERVL -28 493 381 740 268 84 23 chr17 34903454 34903715 -50534765 - LTR33 LTR ERVL -242 279 3 1238 185 63 119 chr17 34903934 34904312 -50534168 + MER57A LTR ERV1 43 399 -4 1822 312 126 24 chr17 34904696 34905856 -50532624 - HERVL LTR ERVL -2056 3598 2558 1318 176 123 11 chr17 34905856 34906117 -50532363 - AluSx SINE Alu -22 290 1 1822 312 126 24 chr17 34906117 34906954 -50531526 - HERVL LTR ERVL -3096 2558 1359 418 233 108 16 chr17 34906958 34907087 -50531393 + MER96 DNA MER1_type? 21 161 -14 464 227 10 0 chr17 34907326 34907423 -50531057 - MER5A DNA MER1_type -83 106 9 11803 36 6 0 chr17 34907768 34909934 -50528546 - L1PA4 LINE L1 0 6155 3977 3431 127 77 74 chr17 34909934 34911233 -50527247 + pTR5 LTR ERV1 66 2436 -2 30141 54 46 1 chr17 34911233 34915042 -50523438 - L1P LINE L1 -2166 3980 1 225 0 0 0 chr17 34915629 34915654 -50522826 + (TG)n Simple_repeat Simple_repeat 2 26 0 799 294 102 50 chr17 34916204 34917367 -50521113 - L1MC4a LINE L1 -808 5338 4632 1972 148 0 10 chr17 34917367 34917665 -50520815 - AluJb SINE Alu -17 295 1 799 294 102 50 chr17 34917665 34917957 -50520523 - L1MC4a LINE L1 -1514 4632 4357 319 214 51 10 chr17 34918238 34918336 -50520144 - HAL1 LINE L1 -856 1651 1550 1089 134 4 121 chr17 34918543 34918774 -50519706 + MER20 DNA MER1_type 16 219 0 468 266 125 11 chr17 34919135 34919496 -50518984 - HAL1b LINE L1 -26 1322 921 891 261 97 18 chr17 34919985 34920315 -50518165 - HAL1b LINE L1 -548 800 445 827 159 0 181 chr17 34920319 34920590 -50517890 + L1MEc LINE L1 42 263 -6133 2122 137 0 0 chr17 34920682 34920974 -50517506 - AluSx SINE Alu -16 296 5 1830 172 33 7 chr17 34921663 34921843 -50516637 - AluJo SINE Alu -2 310 117 267 103 0 0 chr17 34921843 34921882 -50516598 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 1830 172 33 7 chr17 34921882 34922003 -50516477 - AluJo SINE Alu -195 117 1 25 0 0 0 chr17 34923927 34923952 -50514528 + AT_rich Low_complexity Low_complexity 1 25 0 742 199 11 52 chr17 34924073 34924264 -50514216 + pTR5 LTR ERV1 742 924 -1514 451 193 12 0 chr17 34924367 34924450 -50514030 + AluJo SINE Alu 72 155 -157 849 149 8 0 chr17 34924456 34924577 -50513903 - FLAM_C SINE Alu -21 122 1 572 258 89 4 chr17 34924577 34924825 -50513655 - L1M4 LINE L1 -946 5200 4932 197 32 0 32 chr17 34925222 34925253 -50513227 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 1947 103 50 4 chr17 34925258 34925519 -50512961 - AluSx SINE Alu -37 275 3 2115 126 45 34 chr17 34927419 34927776 -50510704 + THE1B LTR MaLR 1 361 -3 1071 270 75 137 chr17 34928807 34929166 -50509314 - MER1B DNA MER1_type 0 337 1 180 308 77 48 chr17 34929309 34929413 -50509067 + MIR SINE MIR 4 110 -152 2210 110 0 0 chr17 34929622 34929921 -50508559 - AluSq SINE Alu -14 299 1 372 212 44 9 chr17 34929921 34930047 -50508433 + L1ME3A LINE L1 5834 5963 -207 21 0 0 0 chr17 34930240 34930261 -50508219 + AT_rich Low_complexity Low_complexity 1 21 0 252 256 139 23 chr17 34930633 34930762 -50507718 - L1ME4a LINE L1 -15 6106 5963 180 0 0 0 chr17 34930951 34930971 -50507509 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 2324 97 0 0 chr17 34930974 34931263 -50507217 - AluSx SINE Alu -23 289 1 933 257 102 35 chr17 34931549 34931981 -50506499 + HAL1 LINE L1 1752 2212 -295 1147 135 0 0 chr17 34932000 34932156 -50506324 + AluSx SINE Alu 1 156 -156 342 0 0 0 chr17 34932467 34932505 -50505975 + (CA)n Simple_repeat Simple_repeat 1 38 0 1092 168 24 39 chr17 34934832 34935040 -50503440 + AluJo SINE Alu 82 286 -26 1787 191 52 3 chr17 34935104 34935449 -50503031 + MLT1A1 LTR MaLR 4 365 0 331 246 14 0 chr17 34935639 34935708 -50502772 + L1MEc LINE L1 246 315 -6292 323 258 75 30 chr17 34935719 34935930 -50502550 + L1MEc LINE L1 1359 1740 -4867 1756 167 27 10 chr17 34935980 34936274 -50502206 - AluJo SINE Alu -9 303 5 584 197 17 101 chr17 34936284 34936462 -50502018 - MER89-int LTR ERV1 -2512 4289 4127 1993 105 0 0 chr17 34936465 34936722 -50501758 + AluSx SINE Alu 54 310 -2 2639 46 3 0 chr17 34936724 34937030 -50501450 + AluY SINE Alu 3 309 -2 3247 242 53 62 chr17 34937039 34937752 -50500728 - MER89-int LTR ERV1 -3443 3358 2641 2478 34 14 14 chr17 34937752 34938048 -50500432 - AluY SINE Alu -15 296 1 3247 242 53 62 chr17 34938048 34938438 -50500042 - MER89-int LTR ERV1 -4160 2641 110 7339 200 83 92 chr17 34938457 34939874 -50498606 - MER89-int LTR ERV1 -4258 2543 1108 338 87 0 0 chr17 34939874 34939920 -50498560 - MADE1 DNA Mariner -34 46 1 7339 200 83 92 chr17 34939920 34940732 -50497748 - MER89-int LTR ERV1 -5693 1108 290 1957 209 19 8 chr17 34941050 34941501 -50496979 - MER89 LTR ERV1 -4 555 1 3053 211 32 38 chr17 34941501 34941595 -50496885 + L1ME1 LINE L1 5026 5119 -1047 2103 120 3 3 chr17 34941595 34941894 -50496586 - AluSx SINE Alu -13 299 1 3053 211 32 38 chr17 34941894 34941988 -50496492 + L1ME1 LINE L1 5119 5212 -954 1186 98 21 36 chr17 34941988 34942182 -50496298 + L1PA11 LINE L1 5984 6174 0 3053 211 32 38 chr17 34942182 34942899 -50495581 + L1ME1 LINE L1 5212 5919 -247 2038 174 93 19 chr17 34942946 34943452 -50495028 + Tigger7 DNA MER2_type 2 2486 -1 1407 95 9 81 chr17 34943601 34943823 -50494657 - AluSx SINE Alu -106 206 1 239 245 21 53 chr17 34944511 34944605 -50493875 + LTR31 LTR ERV1 450 540 -79 191 36 36 0 chr17 34945610 34945638 -50492842 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 1583 154 6 69 chr17 34947338 34947466 -50491014 + AluJo SINE Alu 1 135 -177 2014 129 0 4 chr17 34947466 34947773 -50490707 - AluSg SINE Alu 0 306 1 1583 154 6 69 chr17 34947773 34947961 -50490519 + AluJo SINE Alu 135 298 -14 352 0 42 0 chr17 34948433 34948481 -50489999 + (TC)n Simple_repeat Simple_repeat 1 50 0 2376 84 0 22 chr17 34948573 34948884 -50489596 - AluY SINE Alu -7 304 1 699 208 72 86 chr17 34949710 34949958 -50488522 + L1MC4 LINE L1 7259 7575 -467 794 159 0 15 chr17 34949958 34950090 -50488390 + FLAM_A SINE Alu 4 133 0 699 208 72 86 chr17 34950090 34950231 -50488249 + L1MC4 LINE L1 7575 7716 -326 581 276 51 12 chr17 34950231 34950525 -50487955 + LTR16B LTR ERVL 12 350 -114 1027 283 11 34 chr17 34950534 34950884 -50487596 + HERV16 LTR ERVL 1086 1427 -3569 3835 314 74 22 chr17 34950931 34953094 -50485386 + HERV16 LTR ERVL 1567 3827 -1658 913 191 0 0 chr17 34953096 34953248 -50485232 + FRAM SINE Alu 1 146 -30 198 103 0 0 chr17 34953255 34953284 -50485196 + (GAA)n Simple_repeat Simple_repeat 2 30 0 7092 58 7 0 chr17 34953299 34954271 -50484209 + L1PA7 LINE L1 5168 6146 -8 2254 331 25 12 chr17 34954335 34955309 -50483171 + HERV16 LTR ERVL 3843 4828 -826 341 339 6 33 chr17 34955433 34955781 -50482699 + HERV16 LTR ERVL 4555 5332 -153 1959 149 27 0 chr17 34955901 34956196 -50482284 + AluSx SINE Alu 1 303 -9 1298 271 51 15 chr17 34956205 34956614 -50481866 + LTR16B LTR ERVL 1 424 -40 842 222 91 49 chr17 34956648 34956845 -50481635 + L1MC4 LINE L1 7700 7918 -124 237 65 0 0 chr17 34956845 34956876 -50481604 + (TAGA)n Simple_repeat Simple_repeat 1 31 0 842 222 91 49 chr17 34956876 34957007 -50481473 + L1MC4 LINE L1 7918 8042 0 5802 57 16 51 chr17 34957023 34957842 -50480638 + L1PA13 LINE L1 5356 6145 -18 2167 148 120 5 chr17 34957912 34958296 -50480184 + MSTA LTR MaLR 1 428 0 2008 169 20 31 chr17 34958472 34958863 -50479617 - MLT1B LTR MaLR -3 387 1 1815 167 6 22 chr17 34959107 34959419 -50479061 + AluJb SINE Alu 1 307 -5 1812 169 31 0 chr17 34959895 34960185 -50478295 + AluSx SINE Alu 3 301 -11 1523 229 46 8 chr17 34960444 34960816 -50477664 - MLT1C LTR MaLR 0 467 82 194 293 0 0 chr17 34961200 34961258 -50477222 - MIR SINE MIR -54 208 151 1338 250 135 46 chr17 34961285 34961907 -50476573 - L1ME3A LINE L1 -15 6155 5475 1793 133 0 56 chr17 34961907 34962230 -50476250 - AluJo SINE Alu -7 305 1 2334 129 2 77 chr17 34962255 34962379 -50476101 - L1PB3 LINE L1 -20 6134 6011 963 208 54 82 chr17 34962379 34962827 -50475653 - L1PA11 LINE L1 -162 6012 5326 1306 182 0 4 chr17 34962827 34963052 -50475428 - AluJo SINE Alu -4 308 85 1077 220 42 132 chr17 34963053 34963675 -50474805 - L1ME3A LINE L1 -888 5258 4693 756 165 0 8 chr17 34963697 34963818 -50474662 - FLAM_C SINE Alu -22 121 2 928 262 92 22 chr17 34963820 34964348 -50474132 - L1ME3A LINE L1 -1436 4710 4142 3933 151 29 80 chr17 34964414 34964860 -50473620 - L1MA7 LINE L1 -2 6181 5924 1825 146 32 14 chr17 34964860 34965141 -50473339 - AluSx SINE Alu -26 286 1 3933 151 29 80 chr17 34965141 34965697 -50472783 - L1MA7 LINE L1 -259 5924 5341 643 162 147 0 chr17 34965696 34965832 -50472648 + L1 LINE L1 3805 3960 -2186 * 227 171 0 0 chr17 34965854 34965895 -50472585 + GA-rich Low_complexity Low_complexity 2 42 0 1484 224 90 61 chr17 34965896 34966080 -50472400 + L1 LINE L1 3880 4057 -2089 1716 163 69 107 chr17 34966080 34966321 -50472159 - MSTB1 LTR MaLR 0 432 214 1711 181 0 27 chr17 34966321 34966620 -50471860 + AluJo SINE Alu 5 295 -17 1716 163 69 107 chr17 34966620 34966827 -50471653 - MSTB1 LTR MaLR -218 214 1 1484 224 90 61 chr17 34966827 34967351 -50471129 + L1 LINE L1 4057 4609 -1537 44350 46 1 4 chr17 34967355 34972021 -50466459 + L1PA4 LINE L1 1 4650 -1505 8236 82 7 8 chr17 34972021 34973094 -50465386 - MER11C LTR ERVK 0 1071 1 44350 46 1 4 chr17 34973094 34974597 -50463883 + L1PA4 LINE L1 4650 6155 0 1009 201 126 31 chr17 34974655 34974909 -50463571 + AluJo SINE Alu 21 298 -14 189 0 0 0 chr17 34974932 34974953 -50463527 + (A)n Simple_repeat Simple_repeat 1 21 0 1506 114 36 293 chr17 34975021 34975094 -50463386 + L1 LINE L1 4705 4795 -1351 269 31 0 0 chr17 34975094 34975126 -50463354 + U2 snRNA snRNA 1 32 -156 1506 114 36 293 chr17 34975126 34975831 -50462649 + L1 LINE L1 4795 5306 -840 291 111 0 0 chr17 34975848 34975893 -50462587 + LOR1a LTR ERV1 239 283 -214 952 139 377 9 chr17 34975982 34976197 -50462283 + AluJo SINE Alu 11 304 -8 225 0 0 0 chr17 34976271 34976296 -50462184 + (TCTCCC)n Simple_repeat Simple_repeat 1 25 0 9958 42 14 131 chr17 34976301 34977836 -50460644 + SVA Other Other 32 1386 0 1137 157 25 15 chr17 34980027 34980224 -50458256 + L1PB4 LINE L1 5951 6149 -7 29 0 0 0 chr17 34980249 34980278 -50458202 + AT_rich Low_complexity Low_complexity 1 29 0 1694 261 78 2 chr17 34981632 34982195 -50456285 - L1M4 LINE L1 -1965 4181 3576 681 124 177 0 chr17 34982204 34982317 -50456163 + AluJb SINE Alu 2 134 -178 1014 108 7 0 chr17 34982430 34982569 -50455911 + AluJb SINE Alu 167 306 -6 489 182 25 119 chr17 34982578 34982737 -50455743 - L1M4 LINE L1 -2576 3570 3427 1319 133 13 49 chr17 34983621 34983846 -50454634 + AluJo SINE Alu 85 301 -11 939 279 81 70 chr17 34984604 34985121 -50453359 + MLT1K LTR MaLR 23 545 -43 1045 199 61 132 chr17 34986043 34986469 -50452011 + MSTD LTR MaLR 1 396 0 415 273 147 4 chr17 34986472 34986661 -50451819 + MIR SINE MIR 30 249 -13 2348 95 0 19 chr17 34986708 34987024 -50451456 + AluSg SINE Alu 1 310 0 770 201 72 31 chr17 34987545 34987770 -50450710 + MIR SINE MIR 1 240 -22 283 222 167 22 chr17 34987885 34987975 -50450505 + MER5A DNA MER1_type 81 183 -6 193 125 0 0 chr17 34989012 34989044 -50449436 + L2 LINE L2 3024 3055 -217 571 254 155 68 chr17 34989677 34989925 -50448555 + MLT1J2 LTR MaLR 47 337 -113 2331 84 0 7 chr17 34989925 34990222 -50448258 + AluSc SINE Alu 1 295 -14 571 254 155 68 chr17 34990222 34990327 -50448153 + MLT1J2 LTR MaLR 337 431 -19 2396 96 0 6 chr17 34990716 34991029 -50447451 + AluSx SINE Alu 1 311 -1 194 0 0 37 chr17 34991292 34991319 -50447161 + (CTTG)n Simple_repeat Simple_repeat 3 28 0 209 318 131 0 chr17 34991782 34991889 -50446591 + MIR SINE MIR 132 252 -10 863 252 26 52 chr17 34992410 34992720 -50445760 + L1MC5 LINE L1 6933 7234 -727 500 222 215 0 chr17 34992727 34992871 -50445609 + MER5B DNA MER1_type 3 177 -1 615 284 41 11 chr17 34993114 34993385 -50445095 + L1MC5 LINE L1 7306 7584 -377 186 133 0 0 chr17 34993429 34993459 -50445021 + (GAAA)n Simple_repeat Simple_repeat 3 32 0 796 167 0 8 chr17 34993535 34993661 -50444819 + FLAM_C SINE Alu 1 125 -8 1336 144 0 42 chr17 34993683 34993898 -50444582 + AluJo SINE Alu 1 206 -106 1126 174 0 46 chr17 34994013 34994231 -50444249 + AluJo SINE Alu 85 292 -20 459 195 23 62 chr17 34994239 34994367 -50444113 + L1MC5 LINE L1 7662 7784 -177 358 103 0 128 chr17 34994369 34994447 -50444033 + AluSp/q SINE Alu 235 302 -1 357 195 0 24 chr17 34994494 34994576 -50443904 + L1MC5 LINE L1 7832 7911 -50 222 118 0 0 chr17 34994594 34994628 -50443852 + (TG)n Simple_repeat Simple_repeat 1 34 0 237 351 0 0 chr17 34994938 34995015 -50443465 + MIR SINE MIR 47 123 -139 267 219 0 16 chr17 34995015 34995079 -50443401 - MLT1H1-int LTR MaLR -1300 71 9 1081 258 89 42 chr17 34995096 34995392 -50443088 - MLT1H1 LTR MaLR -13 542 214 2030 103 0 58 chr17 34995392 34995702 -50442778 - AluSq SINE Alu -21 292 1 1081 258 89 42 chr17 34995702 34995903 -50442577 - MLT1H1 LTR MaLR -341 214 24 263 304 201 14 chr17 34995993 34996207 -50442273 + MIR SINE MIR 6 259 -3 1882 161 0 7 chr17 34996593 34996899 -50441581 - AluJo SINE Alu 0 304 1 1852 142 3 46 chr17 34997279 34997582 -50440898 - AluSx SINE Alu -16 296 7 326 283 243 0 chr17 34997837 34997989 -50440491 + MIR SINE MIR 7 195 -67 1335 148 5 31 chr17 34998065 34998288 -50440192 + AluJo SINE Alu 84 300 -12 1707 189 3 12 chr17 34998846 34999168 -50439312 + L1MC1 LINE L1 6015 6333 0 2312 125 0 0 chr17 34999433 34999738 -50438742 + AluSx SINE Alu 1 305 -7 2256 106 30 0 chr17 34999745 35000092 -50438388 + AluSx SINE Alu 1 356 0 323 219 0 0 chr17 35000102 35000166 -50438314 - MER5A DNA MER1_type -86 103 40 301 137 20 0 chr17 35000224 35000275 -50438205 - MER65B LTR ERV1 0 531 480 2103 177 49 12 chr17 35000320 35000726 -50437754 - MER65C LTR ERV1 -39 422 2 428 292 9 0 chr17 35001061 35001174 -50437306 + L2 LINE L2 3139 3252 -20 208 286 0 0 chr17 35001318 35001374 -50437106 - L2 LINE L2 0 3313 3258 333 370 40 12 chr17 35001495 35001746 -50436734 - L2 LINE L2 -568 2746 2489 192 277 99 99 chr17 35001766 35002019 -50436461 - L2 LINE L2 -1024 2290 2038 444 250 0 0 chr17 35002061 35002149 -50436331 + FRAM/FAM SINE Alu 1 88 -97 249 172 52 0 chr17 35002149 35002207 -50436273 + L1MD3 LINE L1 7935 7995 0 215 170 0 57 chr17 35002439 35002492 -50435988 + T-rich Low_complexity Low_complexity 5 54 0 888 262 258 17 chr17 35003049 35003645 -50434835 + HAL1 LINE L1 1754 2493 -14 1941 159 3 7 chr17 35004587 35004888 -50433592 - AluJo SINE Alu -12 300 1 199 0 65 0 chr17 35005420 35005451 -50433029 + (ATTG)n Simple_repeat Simple_repeat 4 36 0 903 177 0 32 chr17 35005451 35005609 -50432871 - AluJb SINE Alu -32 280 128 1955 153 0 0 chr17 35005964 35006239 -50432241 - AluSx SINE Alu -37 275 1 238 273 122 29 chr17 35007289 35007428 -50431052 + MLT1K LTR MaLR 85 236 -352 324 0 0 0 chr17 35007458 35007494 -50430986 + (TC)n Simple_repeat Simple_repeat 1 36 0 698 239 80 32 chr17 35007514 35007765 -50430715 + MLT1K LTR MaLR 319 581 -7 4747 53 28 13 chr17 35007832 35008450 -50430030 - L1PA6 LINE L1 0 6154 5528 7689 47 7 13 chr17 35008450 35009528 -50428952 + L1P2 LINE L1 4411 5476 -678 2156 130 0 9 chr17 35009548 35009863 -50428617 + AluSx SINE Alu 1 312 0 523 163 0 0 chr17 35009768 35009860 -50428620 + AluS SINE Alu 221 398 0 508 58 12 35 chr17 35009860 35009946 -50428534 + (GAAAA)n Simple_repeat Simple_repeat 2 180 0 311 286 193 7 chr17 35010342 35010482 -50427998 - MIR SINE MIR -50 212 47 1499 125 0 0 chr17 35011037 35011245 -50427235 - AluSp SINE Alu 0 313 106 445 333 105 9 chr17 35011262 35011481 -50426999 - MIR SINE MIR -2 260 21 451 293 70 8 chr17 35012082 35012324 -50426156 + L2 LINE L2 2804 3060 -212 830 171 18 15 chr17 35012567 35012884 -50425596 + CT-rich Low_complexity Low_complexity 1 318 0 1889 186 0 0 chr17 35012898 35013210 -50425270 - AluJo SINE Alu 0 312 1 2124 168 67 45 chr17 35013595 35013637 -50424843 + MLT1D LTR MaLR 1 41 -464 2419 78 3 0 chr17 35013637 35013933 -50424547 + AluY SINE Alu 1 297 -14 2124 168 67 45 chr17 35013933 35014322 -50424158 + MLT1D LTR MaLR 41 447 -58 2354 107 3 0 chr17 35014322 35014631 -50423849 + AluSx SINE Alu 1 310 -2 2124 168 67 45 chr17 35014631 35014692 -50423788 + MLT1D LTR MaLR 447 505 0 2202 137 3 0 chr17 35015199 35015505 -50422975 + AluSx SINE Alu 1 307 -5 240 245 126 66 chr17 35015605 35015756 -50422724 + L1ME4a LINE L1 5959 6118 -3 1908 168 0 3 chr17 35016891 35017194 -50421286 - AluJb SINE Alu -10 302 1 216 0 0 0 chr17 35017194 35017218 -50421262 + (T)n Simple_repeat Simple_repeat 1 24 0 285 421 0 7 chr17 35017974 35018119 -50420361 + L2 LINE L2 2934 3077 -195 2001 97 3 85 chr17 35018407 35018736 -50419744 + AluSx SINE Alu 2 303 -9 2262 119 0 19 chr17 35018741 35019059 -50419421 + AluSx SINE Alu 1 312 0 563 257 69 6 chr17 35019730 35019905 -50418575 + MIR SINE MIR 13 198 -64 897 254 181 6 chr17 35019909 35020108 -50418372 - LTR16A LTR ERVL 0 450 287 1650 189 24 7 chr17 35020108 35020399 -50418081 - AluJo SINE Alu -6 306 11 897 254 181 6 chr17 35020399 35020530 -50417950 - LTR16A LTR ERVL -163 287 62 272 255 31 20 chr17 35020869 35020967 -50417513 + MIR3 SINE MIR 3 101 -107 1741 168 0 54 chr17 35021464 35021779 -50416701 - AluJo SINE Alu -14 298 1 2355 108 0 3 chr17 35021785 35022092 -50416388 - AluSx SINE Alu -6 306 1 434 159 1 13 chr17 35022118 35022206 -50416274 + MER58 DNA MER1_type 128 2420 0 254 232 93 28 chr17 35022248 35022355 -50416125 + MER5A DNA MER1_type 23 147 -42 1648 142 95 22 chr17 35022584 35022858 -50415622 + AluJo SINE Alu 1 294 -18 819 154 80 6 chr17 35022861 35023023 -50415457 + FAM SINE Alu 1 174 -1 2238 210 72 11 chr17 35023023 35023547 -50414933 + MLT1F1 LTR MaLR 12 567 0 378 290 142 0 chr17 35023885 35024040 -50414440 + MIR3 SINE MIR 20 196 -12 482 211 57 6 chr17 35024076 35024223 -50414257 + MIR SINE MIR 105 259 -3 183 300 38 38 chr17 35024386 35024466 -50414014 - L2 LINE L2 -64 3208 3129 675 290 59 35 chr17 35024531 35024786 -50413694 - MIR SINE MIR 0 262 2 1423 113 44 10 chr17 35024948 35025152 -50413328 + AluSq SINE Alu 84 294 -19 690 129 45 30 chr17 35025164 35025296 -50413184 + FLAM_C SINE Alu 6 139 -4 2950 208 39 47 chr17 35025393 35026134 -50412346 - MER21B LTR ERV1 -124 739 5 1927 142 14 10 chr17 35027010 35027305 -50411175 + AluJo SINE Alu 1 296 -16 2838 79 2 83 chr17 35027319 35027815 -50410665 + MER4C LTR ERV1 10 465 0 305 213 250 0 chr17 35028541 35028649 -50409831 - L3 LINE CR1 -70 1507 1373 649 277 71 25 chr17 35028934 35029216 -50409264 + L3 LINE CR1 1143 1437 -140 242 206 46 86 chr17 35029337 35029473 -50409007 + MLT1G3 LTR MaLR 158 363 -232 1719 186 37 0 chr17 35029578 35029874 -50408606 + AluJo SINE Alu 1 307 -5 654 301 60 34 chr17 35029894 35030246 -50408234 + L1ME4a LINE L1 5312 5672 -449 872 83 0 1 chr17 35030246 35030529 -50407951 + AluSx SINE Alu 1 321 0 255 263 84 0 chr17 35030585 35030680 -50407800 + L1ME4a LINE L1 5727 5829 -292 255 299 162 0 chr17 35030828 35031069 -50407411 + L1ME4a LINE L1 5826 6105 -16 1599 106 0 5 chr17 35031112 35031320 -50407160 - AluSg/x SINE Alu -20 290 84 1558 154 7 48 chr17 35031420 35031713 -50406767 + AluJo SINE Alu 11 291 -21 21 36 0 0 chr17 35032012 35032040 -50406440 + GC_rich Low_complexity Low_complexity 1 28 0 268 319 133 7 chr17 35032504 35032639 -50405841 - MIR SINE MIR -62 200 49 180 0 0 0 chr17 35032661 35032681 -50405799 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 2384 59 3 30 chr17 35032683 35032988 -50405492 - AluSc SINE Alu -12 297 1 310 278 52 26 chr17 35033042 35033157 -50405323 + MER5A DNA MER1_type 50 167 -22 2075 116 0 0 chr17 35033281 35033557 -50404923 + AluSx SINE Alu 32 307 -5 180 0 0 0 chr17 35033576 35033596 -50404884 + (TGAA)n Simple_repeat Simple_repeat 1 20 0 1806 142 59 0 chr17 35033641 35033929 -50404551 - AluJb SINE Alu -2 310 6 250 286 43 0 chr17 35034032 35034102 -50404378 + MIR SINE MIR 177 249 -13 * 269 176 39 0 chr17 35034068 35034119 -50404361 + L2 LINE L2 3261 3313 0 1032 201 11 185 chr17 35034159 35034514 -50403966 - MLT1B LTR MaLR 0 390 -25 1721 188 3 31 chr17 35034514 35034833 -50403647 + AluJo SINE Alu 1 310 -2 1032 201 11 185 chr17 35034833 35034896 -50403584 - MLT1B LTR MaLR -415 4294967271 37 1443 97 65 0 chr17 35034896 35035112 -50403368 + MER30 DNA MER1_type 1 230 0 1032 201 11 185 chr17 35035112 35035145 -50403335 - MLT1B LTR MaLR -352 38 1 673 338 136 5 chr17 35035145 35035586 -50402894 - L2 LINE L2 -348 2966 2468 251 116 337 35 chr17 35035641 35035727 -50402753 + MIR SINE MIR 116 227 -35 1951 137 0 7 chr17 35035820 35036154 -50402326 - AluSx SINE Alu 0 332 1 575 327 6 0 chr17 35037093 35037258 -50401222 + MIR3 SINE MIR 14 179 -29 212 163 0 0 chr17 35037487 35037530 -50400950 + A-rich Low_complexity Low_complexity 1 43 0 980 126 34 17 chr17 35037844 35038019 -50400461 + MER96B DNA MER1_type? 2 179 -238 200 293 170 0 chr17 35038441 35038547 -50399933 - L2 LINE L2 0 3272 3149 1823 149 0 0 chr17 35038940 35039209 -50399271 - AluSx SINE Alu -4 308 40 2259 120 3 0 chr17 35039411 35039712 -50398768 + AluSx SINE Alu 1 302 -10 2253 91 0 3 chr17 35039772 35040080 -50398400 + AluSx SINE Alu 1 307 0 258 215 62 0 chr17 35040686 35040751 -50397729 + MIR SINE MIR 79 147 -115 979 167 14 76 chr17 35041096 35041306 -50397174 - AluJo SINE Alu -18 294 98 375 307 60 104 chr17 35041441 35041487 -50396993 + MIR SINE MIR 28 74 -188 949 138 0 133 chr17 35041487 35041557 -50396923 - MER5A DNA MER1_type 0 189 111 2112 147 10 0 chr17 35041557 35041864 -50396616 + AluSx SINE Alu 1 310 -2 949 138 0 133 chr17 35041864 35042011 -50396469 - MER5A DNA MER1_type -78 111 1 375 307 60 104 chr17 35042011 35042218 -50396262 + MIR SINE MIR 74 261 -1 273 229 193 0 chr17 35042301 35042384 -50396096 - L2 LINE L2 0 3272 3174 227 288 0 15 chr17 35044503 35044569 -50393911 + (CATATA)n Simple_repeat Simple_repeat 2 66 0 222 253 169 12 chr17 35044665 35044748 -50393732 - MIR3 SINE MIR -98 110 15 222 254 34 0 chr17 35045103 35045162 -50393318 + MIR SINE MIR 60 120 -142 188 250 0 21 chr17 35045263 35045311 -50393169 - L2 LINE L2 -59 3254 3208 2279 100 0 0 chr17 35045365 35045669 -50392811 + AluSg SINE Alu 1 304 0 186 189 0 0 chr17 35045857 35045894 -50392586 + (TTCA)n Simple_repeat Simple_repeat 1 37 0 296 47 0 23 chr17 35046129 35046172 -50392308 + (TTCA)n Simple_repeat Simple_repeat 1 42 0 493 323 35 25 chr17 35048101 35048299 -50390181 - MIR SINE MIR -48 214 15 1037 318 73 13 chr17 35048542 35048842 -50389638 + L3 LINE CR1 1084 1424 -153 2215 120 0 0 chr17 35048842 35049184 -50389296 - AluSg SINE Alu 0 342 1 1037 318 73 13 chr17 35049184 35049345 -50389135 + L3 LINE CR1 1424 1574 -3 2075 116 3 11 chr17 35049936 35050220 -50388260 + AluSx SINE Alu 1 282 -30 2283 88 7 7 chr17 35050455 35050749 -50387731 - AluSc SINE Alu -15 294 1 423 240 40 0 chr17 35050814 35050914 -50387566 + MER103 DNA DNA 1 104 -62 468 243 110 0 chr17 35051395 35051495 -50386985 - MER5B DNA MER1_type 0 178 58 684 175 16 74 chr17 35051495 35051618 -50386862 + MER5B DNA MER1_type 1 111 -67 1948 139 9 35 chr17 35051618 35051935 -50386545 - AluJo SINE Alu -3 309 1 684 175 16 74 chr17 35051935 35052000 -50386480 + MER5B DNA MER1_type 111 178 0 468 243 110 0 chr17 35052000 35052035 -50386445 - MER5B DNA MER1_type -120 58 28 2563 58 0 0 chr17 35052053 35052346 -50386134 - AluY SINE Alu -18 293 1 208 140 60 60 chr17 35052346 35052391 -50386089 - MER5B DNA MER1_type -132 46 2 813 198 0 39 chr17 35052398 35052580 -50385900 - MER5A DNA MER1_type -1 188 14 2429 84 3 0 chr17 35052768 35053065 -50385415 + AluSx SINE Alu 1 298 -14 325 222 78 0 chr17 35053408 35053498 -50384982 - L2 LINE L2 -16 3297 3201 1643 229 25 71 chr17 35053516 35053659 -50384821 + L1MD2 LINE L1 4252 4400 -1746 2123 143 7 0 chr17 35053659 35053960 -50384520 + AluSx SINE Alu 1 303 -9 2240 90 4 0 chr17 35053961 35054272 -50384208 + AluY SINE Alu 1 312 0 1643 229 25 71 chr17 35054272 35054758 -50383722 + L1MD2 LINE L1 4399 4855 -1291 1065 149 0 28 chr17 35054758 35054939 -50383541 - AluJ SINE Alu -17 295 120 2105 84 94 7 chr17 35054954 35055240 -50383240 - AluSp SINE Alu -2 311 1 2053 89 22 0 chr17 35055241 35055512 -50382968 - AluSq SINE Alu -36 277 1 840 100 0 18 chr17 35055514 35055624 -50382856 - AluJ SINE Alu -181 131 24 4086 189 60 23 chr17 35055626 35056075 -50382405 + L1MD2 LINE L1 4849 5280 -1079 1829 152 0 37 chr17 35056075 35056371 -50382109 + AluJb SINE Alu 13 297 -15 2438 88 3 0 chr17 35056371 35056665 -50381815 + AluSp SINE Alu 1 296 -17 4086 189 60 23 chr17 35056665 35057170 -50381310 + L1MD2 LINE L1 5280 5921 -438 2414 106 0 0 chr17 35057170 35057481 -50380999 + AluSx SINE Alu 1 311 -1 4086 189 60 23 chr17 35057481 35057811 -50380669 + L1MD2 LINE L1 5921 6237 -122 841 128 0 24 chr17 35057814 35057939 -50380541 - FLAM_A SINE Alu -1 141 20 288 216 137 49 chr17 35057948 35058050 -50380430 + L1MD2 LINE L1 6228 6338 -21 180 0 0 0 chr17 35058059 35058079 -50380401 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2184 136 0 0 chr17 35058196 35058491 -50379989 + AluSx SINE Alu 1 295 -17 627 201 151 0 chr17 35058612 35058771 -50379709 + MER5A DNA MER1_type 7 189 0 307 284 49 0 chr17 35058908 35059010 -50379470 - MIR SINE MIR -79 183 77 350 265 109 41 chr17 35059170 35059317 -50379163 + MER5B DNA MER1_type 22 178 0 198 296 0 0 chr17 35060046 35060090 -50378390 + MIR SINE MIR 29 72 -190 258 243 54 0 chr17 35061106 35061180 -50377300 - MER3 DNA MER1_type -131 78 1 206 247 183 3 chr17 35061722 35061854 -50376626 - MIR SINE MIR -21 187 31 3783 116 8 0 chr17 35063720 35064236 -50374244 + MER1A DNA MER1_type 1 520 -9 192 244 0 0 chr17 35064251 35064292 -50374188 - L3 LINE CR1 -11 1566 1526 * 339 266 149 0 chr17 35064261 35064394 -50374086 - MIR SINE MIR -25 183 16 753 228 16 36 chr17 35064492 35064685 -50373795 - MER5A DNA MER1_type 0 189 1 440 252 114 8 chr17 35064895 35065018 -50373462 + MER5A DNA MER1_type 1 136 -53 325 305 126 40 chr17 35065996 35066096 -50372384 - MER5A DNA MER1_type -22 167 48 2122 119 3 0 chr17 35066096 35066398 -50372082 + AluSg SINE Alu 1 303 -7 325 305 126 40 chr17 35066398 35066448 -50372032 - MER5A DNA MER1_type -141 48 4 292 253 33 11 chr17 35066469 35066560 -50371920 + Charlie7 DNA MER1_type 8 100 -2512 2027 129 0 3 chr17 35066674 35066976 -50371504 + AluSx SINE Alu 1 301 -11 359 253 0 33 chr17 35067027 35067118 -50371362 - L1MC5 LINE L1 -36 7925 7838 342 310 191 8 chr17 35067288 35067457 -50371023 - L1ME3A LINE L1 -218 5952 5730 1444 152 130 4 chr17 35067457 35067727 -50370753 - AluJb SINE Alu -8 304 1 342 310 191 8 chr17 35067727 35067786 -50370694 - L1ME3A LINE L1 -440 5730 5683 2134 122 0 0 chr17 35067818 35068130 -50370350 - AluSx SINE Alu 0 312 1 797 245 29 29 chr17 35068182 35068344 -50370136 + MER112 DNA MER1_type 4 169 -91 2099 85 4 4 chr17 35068344 35068648 -50369832 - AluSc SINE Alu 0 304 1 797 245 29 29 chr17 35068648 35068725 -50369755 + MER112 DNA MER1_type 168 244 -16 317 315 65 65 chr17 35069013 35069126 -50369354 - MIR SINE MIR -35 227 115 186 71 0 0 chr17 35069126 35069154 -50369326 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 1853 133 0 25 chr17 35069154 35069440 -50369040 - AluSx SINE Alu -33 279 1 317 315 65 65 chr17 35069440 35069525 -50368955 - MIR SINE MIR -145 117 28 800 238 18 6 chr17 35069625 35069789 -50368691 - MER45A DNA AcHobo 0 178 13 626 234 34 120 chr17 35069810 35070160 -50368320 + L2 LINE L2 2948 3267 -5 1776 141 7 23 chr17 35070559 35070687 -50367793 + AluJb SINE Alu 6 135 -177 459 0 0 0 chr17 35070687 35070738 -50367742 + (TA)n Simple_repeat Simple_repeat 2 52 0 1776 141 7 23 chr17 35070738 35070908 -50367572 + AluJb SINE Alu 135 299 -13 444 118 0 0 chr17 35070908 35070976 -50367504 + (GGGA)n Simple_repeat Simple_repeat 1 68 0 230 306 16 0 chr17 35071457 35071519 -50366961 + MIR3 SINE MIR 136 198 -10 181 351 122 0 chr17 35071900 35071974 -50366506 - L2 LINE L2 -64 3208 3126 652 212 36 36 chr17 35071997 35072162 -50366318 + MIR SINE MIR 17 181 -81 31 0 0 0 chr17 35072274 35072305 -50366175 + AT_rich Low_complexity Low_complexity 1 31 0 1759 125 6 51 chr17 35072307 35072620 -50365860 + AluJb SINE Alu 1 299 -13 2058 110 0 23 chr17 35073846 35074155 -50364325 + AluSx SINE Alu 1 302 -10 1365 140 0 22 chr17 35074564 35074786 -50363694 - MER20 DNA MER1_type -2 217 1 245 88 29 0 chr17 35074874 35074908 -50363572 - L2 LINE L2 -16 3256 3222 223 250 208 10 chr17 35074908 35074970 -50363510 - MIR SINE MIR -10 252 138 1765 118 14 44 chr17 35075097 35075394 -50363086 + AluSx SINE Alu 3 290 -22 192 342 120 0 chr17 35075636 35075753 -50362727 - L2 LINE L2 -8 3305 3175 537 272 19 105 chr17 35075986 35076102 -50362378 - MIR SINE MIR -11 251 166 2203 81 0 0 chr17 35076102 35076415 -50362065 + AluY SINE Alu 1 313 0 537 272 19 105 chr17 35076415 35076554 -50361926 - MIR SINE MIR -96 166 17 210 71 0 0 chr17 35076798 35076826 -50361654 + (TTTC)n Simple_repeat Simple_repeat 2 29 0 604 35 0 24 chr17 35076882 35076967 -50361513 + (TTTC)n Simple_repeat Simple_repeat 3 85 0 387 266 139 0 chr17 35077979 35078152 -50360328 - MER117 DNA MER1_type 0 197 1 199 375 50 12 chr17 35078523 35078603 -50359877 + L2 LINE L2 3127 3209 -63 537 298 21 44 chr17 35078737 35079077 -50359403 - MLT1L LTR MaLR -194 421 20 909 205 0 0 chr17 35079282 35079438 -50359042 + FRAM SINE Alu 1 156 -10 368 304 9 18 chr17 35079519 35079631 -50358849 - MIR SINE MIR -62 146 36 424 161 46 11 chr17 35079680 35079767 -50358713 - MLT1F LTR MaLR -11 531 442 872 144 8 0 chr17 35079768 35079900 -50358580 + FLAM_C SINE Alu 1 133 0 1580 145 14 42 chr17 35080053 35080336 -50358144 + AluSx SINE Alu 1 275 -37 2302 91 3 0 chr17 35080631 35080940 -50357540 - AluSx SINE Alu -2 310 1 496 174 23 10 chr17 35081712 35081885 -50356595 - L1ME1 LINE L1 -5 6161 5913 914 169 6 0 chr17 35082081 35082241 -50356239 - AluJb SINE Alu -3 309 149 935 131 0 0 chr17 35082296 35082433 -50356047 + AluJb SINE Alu 1 137 -175 2209 136 19 3 chr17 35082653 35083027 -50355453 - L1MB3 LINE L1 0 6183 5804 639 165 0 0 chr17 35083029 35083132 -50355348 + AluSq/x SINE Alu 3 105 -207 568 286 37 6 chr17 35083170 35083331 -50355149 + MIR3 SINE MIR 3 168 -40 504 313 7 13 chr17 35085353 35085503 -50352977 - MER117 DNA MER1_type -48 149 1 1692 163 0 33 chr17 35085582 35085888 -50352592 + AluJb SINE Alu 1 296 -16 262 235 183 52 chr17 35085888 35086003 -50352477 - MIR3 SINE MIR -46 162 33 2233 78 10 3 chr17 35086030 35086326 -50352154 + AluSx SINE Alu 1 298 -14 1022 150 24 0 chr17 35086328 35086495 -50351985 + AluSg/x SINE Alu 126 296 -14 23 0 0 0 chr17 35087050 35087073 -50351407 + AT_rich Low_complexity Low_complexity 1 23 0 180 0 0 0 chr17 35087183 35087203 -50351277 + (CATATA)n Simple_repeat Simple_repeat 2 21 0 375 311 0 0 chr17 35087203 35087293 -50351187 + L1MC4 LINE L1 6614 6703 -1339 336 213 27 40 chr17 35087242 35087317 -50351163 - L1MCa LINE L1 -4358 2068 1995 * 2147 105 0 0 chr17 35087318 35087603 -50350877 + AluSg SINE Alu 1 285 -25 4521 207 72 41 chr17 35087869 35087943 -50350537 - L1M4 LINE L1 -764 5382 5312 1822 156 3 10 chr17 35087943 35088257 -50350223 + AluJo SINE Alu 1 312 0 4521 207 72 41 chr17 35088257 35088967 -50349513 - L1M4 LINE L1 -834 5312 4626 1705 169 0 17 chr17 35088967 35089263 -50349217 - AluJo SINE Alu -21 291 1 4521 207 72 41 chr17 35089263 35089885 -50348595 - L1M4 LINE L1 -1520 4626 3927 1825 134 7 4 chr17 35089885 35090162 -50348318 + AluSq SINE Alu 1 278 -35 4521 207 72 41 chr17 35090162 35090180 -50348300 - L1M4 LINE L1 -2219 3927 3911 189 0 0 0 chr17 35090185 35090206 -50348274 + (CA)n Simple_repeat Simple_repeat 2 22 0 2145 89 0 0 chr17 35090306 35090586 -50347894 + AluSq SINE Alu 22 301 -12 1116 103 0 0 chr17 35090588 35090743 -50347737 + AluSg/x SINE Alu 133 287 -25 1616 147 99 0 chr17 35090767 35091040 -50347440 - Tigger3(Golem) DNA MER2_type -2724 305 6 624 139 106 15 chr17 35091040 35091186 -50347294 - MER33 DNA MER1_type -250 74 1 185 311 209 22 chr17 35091387 35091664 -50346816 + L2 LINE L2 2333 2661 -653 207 114 0 0 chr17 35092493 35092528 -50345952 + (CGCGG)n Simple_repeat Simple_repeat 1 35 0 420 300 80 0 chr17 35093279 35093429 -50345051 - MIR SINE MIR -51 211 50 795 255 118 5 chr17 35093769 35093981 -50344499 - MIR SINE MIR 0 262 27 2264 82 0 7 chr17 35094129 35094433 -50344047 + AluSp SINE Alu 1 302 -11 816 208 21 31 chr17 35095388 35095580 -50342900 - AluJo SINE Alu 0 312 123 603 202 36 134 chr17 35095581 35095828 -50342652 - L1MC4 LINE L1 -10 8032 7810 1624 40 10 0 chr17 35096012 35096213 -50342267 + L1PA4 LINE L1 5946 6148 -7 32 0 0 0 chr17 35096213 35096245 -50342235 + AT_rich Low_complexity Low_complexity 1 32 0 3209 256 133 42 chr17 35096575 35097087 -50341393 + L2 LINE L2 1313 1777 -1537 2386 61 0 0 chr17 35097087 35097384 -50341096 + AluY SINE Alu 1 297 -14 3209 256 133 42 chr17 35097384 35098173 -50340307 + L2 LINE L2 1777 2733 -581 477 289 64 80 chr17 35098174 35098548 -50339932 + L1MEd LINE L1 22 389 -5730 300 299 130 60 chr17 35098549 35098964 -50339516 + L1MEd LINE L1 487 930 -5189 1442 240 84 0 chr17 35099009 35099484 -50338996 + L1ME3A LINE L1 5651 6165 -5 253 274 17 8 chr17 35099508 35099625 -50338855 + L1MEd LINE L1 995 1112 -5198 589 264 125 16 chr17 35099663 35100102 -50338378 + L1MEd LINE L1 1130 1616 -4513 2043 106 23 3 chr17 35100142 35100443 -50338037 + AluSx SINE Alu 1 307 -5 1391 76 0 5 chr17 35100493 35100678 -50337802 - L1PB1 LINE L1 0 6151 5968 244 273 145 6 chr17 35100703 35100875 -50337605 + L1MEd LINE L1 2114 2309 -3820 2100 127 3 0 chr17 35100875 35101183 -50337297 + AluSq SINE Alu 1 309 -4 1751 159 3 20 chr17 35101190 35101491 -50336989 + AluJb SINE Alu 1 296 -16 221 167 0 37 chr17 35101496 35101550 -50336930 + G-rich Low_complexity Low_complexity 2 53 0 2040 118 3 16 chr17 35101617 35101931 -50336549 + AluSp SINE Alu 1 310 -3 380 129 0 14 chr17 35101931 35102001 -50336479 + (GGAA)n Simple_repeat Simple_repeat 1 69 0 1524 243 152 36 chr17 35102053 35103082 -50335398 + L1MEd LINE L1 2319 3466 -2663 2058 110 3 3 chr17 35103092 35103401 -50335079 + AluSg SINE Alu 1 309 -1 492 171 276 0 chr17 35103523 35103628 -50334852 + AluJo SINE Alu 2 135 -177 21 36 0 0 chr17 35103628 35103656 -50334824 + AT_rich Low_complexity Low_complexity 1 28 0 1674 122 0 8 chr17 35103694 35103940 -50334540 - AluSp SINE Alu -23 290 47 1395 144 107 0 chr17 35103940 35103960 -50334520 + Tigger3(Golem) DNA MER2_type 2738 2754 -275 450 0 0 0 chr17 35103960 35104010 -50334470 + (TG)n Simple_repeat Simple_repeat 1 50 0 1395 144 107 0 chr17 35104010 35104252 -50334228 + Tigger3(Golem) DNA MER2_type 2754 3028 -1 645 201 27 33 chr17 35104252 35104417 -50334063 + Charlie5 DNA MER1_type 2453 2616 0 434 164 27 0 chr17 35104463 35104536 -50333944 + L2 LINE L2 3239 3313 0 2262 85 7 0 chr17 35104797 35105092 -50333388 + AluSg SINE Alu 1 297 -13 325 208 121 45 chr17 35105120 35105256 -50333224 + MIR SINE MIR 3 148 -62 2446 211 21 10 chr17 35105257 35105869 -50332611 - L1M4 LINE L1 -1127 5019 4401 280 234 112 19 chr17 35105878 35105985 -50332495 + MIR SINE MIR 135 251 -11 1030 259 128 20 chr17 35106046 35106727 -50331753 - L2 LINE L2 -2 3311 2552 318 239 112 45 chr17 35108075 35108209 -50330271 - MIR3 SINE MIR -28 180 38 1395 172 83 3 chr17 35108262 35108552 -50329928 - AluSq SINE Alu 0 313 1 830 134 0 8 chr17 35108553 35108680 -50329800 - AluJo/FLAM SINE Alu -186 126 1 280 281 247 0 chr17 35108754 35108843 -50329637 - L2 LINE L2 0 3272 3162 304 265 205 0 chr17 35108928 35109045 -50329435 - MIR SINE MIR -2 260 120 247 315 22 11 chr17 35109085 35109174 -50329306 + MER5A DNA MER1_type 39 128 -61 222 307 160 25 chr17 35109869 35110107 -50328373 + L2 LINE L2 2811 3080 -192 708 171 12 26 chr17 35110193 35110353 -50328127 + MER20 DNA MER1_type 55 206 -13 1666 164 7 10 chr17 35110355 35110648 -50327832 + AluJo SINE Alu 1 292 -20 573 212 111 69 chr17 35110983 35111172 -50327308 - MIR SINE MIR 0 262 66 22 35 0 0 chr17 35111463 35111492 -50326988 + AT_rich Low_complexity Low_complexity 1 29 0 * 242 235 128 19 chr17 35111473 35111567 -50326913 + MIR SINE MIR 14 113 -95 2261 114 50 26 chr17 35111630 35111973 -50326507 - THE1B LTR MaLR -13 351 1 24 0 0 0 chr17 35112002 35112026 -50326454 + AT_rich Low_complexity Low_complexity 1 24 0 499 293 92 0 chr17 35112065 35112229 -50326251 + MIR SINE MIR 84 262 0 909 274 203 5 chr17 35112967 35113372 -50325108 - L2 LINE L2 -4 3309 2825 2062 72 62 14 chr17 35113480 35113770 -50324710 + AluY SINE Alu 1 304 -7 1080 251 116 78 chr17 35113976 35114562 -50323918 - L2 LINE L2 -550 2764 2157 2047 110 0 57 chr17 35114605 35114922 -50323558 - AluSx SINE Alu -13 299 1 386 298 92 0 chr17 35115158 35115299 -50323181 - MIR SINE MIR -81 181 28 627 174 198 32 chr17 35116198 35116452 -50322028 + MER33 DNA MER1_type 1 342 -2282 1734 164 17 10 chr17 35116452 35116751 -50321729 - AluJb SINE Alu -11 301 1 627 174 198 32 chr17 35116751 35116777 -50321703 + MER33 DNA MER1_type 342 362 -1 2402 75 0 3 chr17 35117147 35117454 -50321026 + AluY SINE Alu 1 306 -5 355 216 0 0 chr17 35117775 35117849 -50320631 + MIR SINE MIR 189 262 0 443 261 97 18 chr17 35118204 35118369 -50320111 - MER5B DNA MER1_type 0 178 1 213 39 0 0 chr17 35119544 35119570 -50318910 + (TCC)n Simple_repeat Simple_repeat 2 27 0 221 246 43 43 chr17 35120729 35120798 -50317682 + MIR SINE MIR 2 70 -192 192 260 116 68 chr17 35121307 35121453 -50317027 - L2 LINE L2 -467 2847 2695 259 301 19 10 chr17 35121510 35121613 -50316867 - L2 LINE L2 -735 2579 2476 1858 153 7 26 chr17 35122189 35122496 -50315984 + AluJb SINE Alu 1 301 -11 198 0 0 0 chr17 35123152 35123174 -50315306 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 2084 123 0 0 chr17 35123174 35123458 -50315022 - AluSx SINE Alu -25 287 1 507 249 122 16 chr17 35123963 35124152 -50314328 - MLT1L LTR MaLR -8 607 399 2411 103 3 0 chr17 35124176 35124488 -50313992 + AluSp SINE Alu 1 313 0 1867 155 7 3 chr17 35124511 35124801 -50313679 + AluJb SINE Alu 1 291 -21 186 0 88 0 chr17 35124801 35124835 -50313645 + GA-rich Low_complexity Low_complexity 1 37 0 417 258 40 16 chr17 35124974 35125098 -50313382 - MLT1L LTR MaLR -456 159 33 558 290 29 54 chr17 35125185 35125464 -50313016 - L2 LINE L2 -192 3080 2809 687 303 57 35 chr17 35125666 35125894 -50312586 + MIR SINE MIR 13 245 -17 2339 207 106 37 chr17 35126016 35126659 -50311821 - L1MC4 LINE L1 -4 8038 7352 24 0 0 0 chr17 35126983 35127007 -50311473 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr17 35127593 35127614 -50310866 + AT_rich Low_complexity Low_complexity 1 21 0 735 167 0 30 chr17 35127633 35127765 -50310715 - AluSg/x SINE Alu -1 309 182 547 250 41 58 chr17 35128767 35128939 -50309541 + MIR3 SINE MIR 19 187 -21 515 267 169 25 chr17 35129299 35129659 -50308821 - L2 LINE L2 -5 3308 2804 577 253 102 36 chr17 35129702 35130065 -50308415 - L1MC5 LINE L1 -46 7915 7529 889 137 0 8 chr17 35130446 35130577 -50307903 + FLAM_A SINE Alu 4 133 0 6970 154 36 73 chr17 35131184 35131566 -50306914 + Charlie1a DNA MER1_type 2 396 -2365 1472 175 52 15 chr17 35131566 35131834 -50306646 - AluJo SINE Alu -13 299 22 6970 154 36 73 chr17 35131834 35132960 -50305520 + Charlie1a DNA MER1_type 396 1455 0 1421 100 1 56 chr17 35133326 35133573 -50304907 + L1MA8 LINE L1 5889 6000 -166 885 133 31 61 chr17 35133598 35133794 -50304686 + L1MA8 LINE L1 6097 6286 -5 238 163 0 0 chr17 35134473 35134516 -50303964 - LTR66 LTR ERVL -175 435 393 1983 139 0 3 chr17 35134536 35134823 -50303657 - AluSx SINE Alu -26 286 1 32 43 0 0 chr17 35134831 35134877 -50303603 + AT_rich Low_complexity Low_complexity 1 46 0 990 135 0 0 chr17 35134899 35135040 -50303440 - AluJb SINE Alu -171 141 1 1576 163 48 11 chr17 35135060 35135330 -50303150 - AluJo SINE Alu -22 290 11 1586 100 66 0 chr17 35135430 35135689 -50302791 - L1MB3 LINE L1 -208 5975 5700 1404 230 19 41 chr17 35135688 35136105 -50302375 - L1M4 LINE L1 -2357 3789 3382 * 886 261 65 0 chr17 35136114 35136313 -50302167 + MER58A DNA MER1_type 13 224 0 810 231 32 41 chr17 35136319 35136498 -50301982 - L1M4 LINE L1 -2761 3385 3206 2058 152 0 7 chr17 35136498 35136808 -50301672 - AluJb SINE Alu 0 312 5 810 231 32 41 chr17 35136808 35136951 -50301529 - L1M4 LINE L1 -2940 3206 2946 253 261 51 51 chr17 35137107 35137245 -50301235 - L2 LINE L2 -1477 1837 1700 2085 150 0 0 chr17 35137577 35137870 -50300610 + AluSx SINE Alu 1 293 -19 21 36 0 0 chr17 35138926 35138954 -50299526 + AT_rich Low_complexity Low_complexity 1 28 0 207 0 0 0 chr17 35139299 35139322 -50299158 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 32 0 0 0 chr17 35139568 35139600 -50298880 + AT_rich Low_complexity Low_complexity 1 32 0 653 254 102 50 chr17 35139856 35140379 -50298101 - L2 LINE L2 -1 3312 2707 465 101 29 29 chr17 35140382 35140451 -50298029 - AluSg/x SINE Alu -25 285 217 1480 192 88 108 chr17 35140551 35140694 -50297786 - L2 LINE L2 -933 2381 2237 2196 117 0 16 chr17 35140694 35141011 -50297469 + AluSx SINE Alu 1 312 0 1480 192 88 108 chr17 35141011 35141387 -50297093 - L2 LINE L2 -1077 2237 1872 2266 108 3 0 chr17 35141936 35142233 -50296247 + AluSq SINE Alu 1 298 -15 1991 156 10 0 chr17 35143399 35143707 -50294773 - AluSx SINE Alu -1 311 1 297 240 0 13 chr17 35143718 35143793 -50294687 - L1ME LINE L1 -288 5833 5760 2088 116 27 3 chr17 35144051 35144345 -50294135 - AluSq SINE Alu -12 301 1 1051 167 12 0 chr17 35144410 35144578 -50293902 - AluJo SINE Alu -22 290 121 228 163 0 0 chr17 35144579 35144622 -50293858 + T-rich Low_complexity Low_complexity 1 43 0 743 159 45 0 chr17 35144623 35144755 -50293725 - FLAM_C SINE Alu 0 143 6 504 0 0 0 chr17 35145345 35145401 -50293079 + (TATG)n Simple_repeat Simple_repeat 3 58 0 751 157 0 0 chr17 35145401 35145516 -50292964 - AluJo SINE Alu -186 116 2 1082 205 163 6 chr17 35145637 35145969 -50292511 + HsTC2 DNA Tc2 1515 1898 0 603 255 108 37 chr17 35145971 35146324 -50292156 - L1M2 LINE L1 -2367 3848 3471 322 240 47 115 chr17 35146333 35146525 -50291955 - L1M2 LINE L1 -3767 2448 2270 1306 157 0 57 chr17 35146525 35146755 -50291725 - AluJo SINE Alu -79 233 17 1624 94 0 0 chr17 35147169 35147370 -50291110 - AluSg/x SINE Alu -26 284 84 300 279 133 9 chr17 35147397 35147655 -50290825 - L1M2 LINE L1 -4258 1958 1542 345 269 0 0 chr17 35147668 35147746 -50290734 - L1ME LINE L1 -2206 5602 5525 4049 152 78 1 chr17 35148196 35148889 -50289591 - L1MB3 LINE L1 -3 6180 5435 2717 114 8 0 chr17 35149008 35149360 -50289120 - THE1A LTR MaLR 0 355 1 12918 83 1 2 chr17 35149360 35150941 -50287539 - THE1A-int LTR MaLR 0 1580 1 2560 107 8 30 chr17 35150941 35151304 -50287176 - THE1A LTR MaLR 0 355 1 253 222 16 151 chr17 35152690 35152816 -50285664 - MER20B DNA MER1_type -616 167 59 2107 143 3 0 chr17 35153081 35153389 -50285091 + AluJo SINE Alu 1 309 -3 622 311 79 13 chr17 35153400 35153628 -50284852 + MIR SINE MIR 20 262 0 2198 210 117 25 chr17 35154214 35154729 -50283751 + MER68 LTR ERV1 1 562 0 1888 209 76 0 chr17 35154741 35155243 -50283237 + L1M4 LINE L1 3676 4256 -1890 193 292 267 8 chr17 35155583 35155703 -50282777 + MIR SINE MIR 20 170 -92 650 289 75 99 chr17 35155741 35155783 -50282697 - MLT1J LTR MaLR -46 465 423 1870 134 17 7 chr17 35155783 35156075 -50282405 + AluSx SINE Alu 1 295 -17 650 289 75 99 chr17 35156075 35156290 -50282190 - MLT1J LTR MaLR -88 423 221 2153 95 13 23 chr17 35156290 35156594 -50281886 - AluSx SINE Alu -11 301 1 650 289 75 99 chr17 35156594 35156778 -50281702 - MLT1J LTR MaLR -290 221 34 203 273 18 0 chr17 35157039 35157094 -50281386 + L2 LINE L2 3216 3271 -1 * 442 294 124 13 chr17 35157093 35157246 -50281234 + MIR SINE MIR 20 189 -73 2130 118 6 16 chr17 35157318 35157631 -50280849 + AluSx SINE Alu 1 310 -2 1066 201 47 5 chr17 35157762 35157976 -50280504 + MIR SINE MIR 12 234 -28 411 288 65 22 chr17 35158331 35158451 -50280029 + L2 LINE L2 2815 2947 -366 2208 116 0 7 chr17 35158451 35158754 -50279726 - AluSq SINE Alu -12 301 1 411 288 65 22 chr17 35158754 35158817 -50279663 + L2 LINE L2 2947 3006 -307 332 296 91 0 chr17 35160820 35160952 -50277528 - MIR3 SINE MIR -45 163 20 195 42 0 0 chr17 35161215 35161239 -50277241 + (GGAA)n Simple_repeat Simple_repeat 2 25 0 397 212 120 54 chr17 35161278 35161462 -50277018 - MIR3 SINE MIR -3 205 10 5925 28 5 1 chr17 35161793 35162448 -50276032 - SVA Other Other -8 1378 722 246 163 61 0 chr17 35162633 35162682 -50275798 - MER5A DNA MER1_type -77 112 61 2223 112 44 0 chr17 35162685 35162980 -50275500 - AluSx SINE Alu -4 308 1 2038 149 23 0 chr17 35162986 35163287 -50275193 - AluSx SINE Alu -3 309 2 289 284 0 0 chr17 35163287 35163354 -50275126 - MER5A DNA MER1_type -114 75 9 386 270 60 0 chr17 35163572 35163672 -50274808 + MIR SINE MIR 137 242 -20 1969 162 3 0 chr17 35163833 35164130 -50274350 + AluJo SINE Alu 1 298 -14 32 43 0 0 chr17 35164213 35164259 -50274221 + AT_rich Low_complexity Low_complexity 1 46 0 311 304 56 43 chr17 35165264 35165425 -50273055 + MIR SINE MIR 87 249 -13 231 204 0 0 chr17 35165469 35165518 -50272962 + (CA)n Simple_repeat Simple_repeat 2 50 0 1717 114 2 143 chr17 35165520 35165913 -50272567 - MER47A DNA MER2_type 0 366 29 676 263 78 26 chr17 35166221 35166453 -50272027 + MIR SINE MIR 9 252 -10 235 313 261 0 chr17 35166702 35166817 -50271663 + L2 LINE L2 3128 3272 0 441 337 75 5 chr17 35167748 35167947 -50270533 + MIR SINE MIR 50 262 0 665 234 70 12 chr17 35168345 35168516 -50269964 - MIR SINE MIR -10 252 72 613 260 176 36 chr17 35168546 35168702 -50269778 - L1MC/D LINE L1 -2105 5703 5570 3733 90 7 68 chr17 35168702 35169292 -50269188 - MER41A LTR ERV1 0 554 1 613 260 176 36 chr17 35169292 35169493 -50268987 - L1MC/D LINE L1 -2238 5570 5296 322 324 41 59 chr17 35169525 35169695 -50268785 - L1MC/D LINE L1 -891 5255 5089 226 290 0 14 chr17 35169856 35169925 -50268555 + MIR SINE MIR 23 90 -172 328 320 20 0 chr17 35170048 35170148 -50268332 - MIR SINE MIR -72 136 35 391 227 42 34 chr17 35170376 35170495 -50267985 + MIR SINE MIR 18 137 -71 230 300 146 31 chr17 35170593 35170723 -50267757 + MIR SINE MIR 3 147 -115 759 257 65 34 chr17 35170883 35171135 -50267345 + MLT1J2 LTR MaLR 1 278 -131 1269 147 59 0 chr17 35171135 35171339 -50267141 + MER20 DNA MER1_type 1 216 -3 759 257 65 34 chr17 35171339 35171476 -50267004 + MLT1J2 LTR MaLR 278 409 0 232 306 216 0 chr17 35171479 35171590 -50266890 - MIR SINE MIR -105 157 23 206 302 0 0 chr17 35172853 35172906 -50265574 + L2 LINE L2 3208 3260 -12 322 269 109 8 chr17 35173311 35173430 -50265050 - MIR3 SINE MIR -65 143 13 320 198 0 8 chr17 35173762 35173888 -50264592 + GA-rich Low_complexity Low_complexity 2 126 0 285 259 60 12 chr17 35173920 35174086 -50264394 + (CAGAGA)n Simple_repeat Simple_repeat 6 179 0 2405 90 3 0 chr17 35174167 35174466 -50264014 + AluSx SINE Alu 1 300 -12 227 301 49 68 chr17 35174601 35174764 -50263716 - MIR SINE MIR -69 193 34 2013 144 10 0 chr17 35175092 35175383 -50263097 - AluJb SINE Alu -18 294 1 220 171 0 0 chr17 35175454 35175489 -50262991 + polypyrimidine Low_complexity Low_complexity 3 37 0 1047 282 85 10 chr17 35175495 35176099 -50262381 - L2 LINE L2 -19 3294 2636 301 323 116 20 chr17 35176304 35176502 -50261978 - MIR SINE MIR -6 256 40 550 310 85 69 chr17 35176586 35176717 -50261763 + L2 LINE L2 2512 2639 -633 1655 171 7 39 chr17 35176717 35177027 -50261453 - AluJo SINE Alu -7 305 6 550 310 85 69 chr17 35177027 35177448 -50261032 + L2 LINE L2 2639 3077 -195 190 286 245 10 chr17 35178661 35178759 -50259721 + MIR3 SINE MIR 6 126 -82 347 287 131 0 chr17 35179287 35179409 -50259071 + MIR3 SINE MIR 20 157 -51 364 298 16 64 chr17 35179417 35179534 -50258946 + MER5A DNA MER1_type 2 125 -64 2390 82 0 3 chr17 35179534 35179826 -50258654 - AluY SINE Alu -20 291 1 364 298 16 64 chr17 35179826 35179881 -50258599 + MER5A DNA MER1_type 125 181 -8 659 277 148 30 chr17 35179995 35180360 -50258120 + L3 LINE CR1 1169 1576 -1 1198 176 0 10 chr17 35181476 35181709 -50256771 + AluJb SINE Alu 109 339 0 495 313 150 30 chr17 35181822 35182189 -50256291 - L3 LINE CR1 -1 1576 1166 883 240 78 16 chr17 35182200 35182590 -50255890 - MLT1J2 LTR MaLR 0 450 9 271 299 19 56 chr17 35182596 35182703 -50255777 - L3 LINE CR1 -425 1152 1050 625 274 0 0 chr17 35182751 35182908 -50255572 - MER63A DNA MER1_type -1 209 53 229 294 44 15 chr17 35182974 35183042 -50255438 - MIR SINE MIR -80 182 113 262 272 123 26 chr17 35183186 35183300 -50255180 + L2 LINE L2 3139 3263 -9 244 298 0 0 chr17 35184404 35184461 -50254019 + polypyrimidine Low_complexity Low_complexity 1 57 0 442 295 54 0 chr17 35184633 35184745 -50253735 + L2 LINE L2 3155 3272 0 2120 155 48 33 chr17 35184914 35185134 -50253346 - MSTA LTR MaLR 0 428 213 2478 76 0 13 chr17 35185134 35185438 -50253042 + AluY SINE Alu 1 300 -11 2276 113 0 10 chr17 35185446 35185747 -50252733 - AluSq SINE Alu -15 298 1 2120 155 48 33 chr17 35185747 35185936 -50252544 - MSTA LTR MaLR -221 207 4 264 261 207 9 chr17 35186256 35186367 -50252113 - MIR3 SINE MIR -67 141 9 237 65 0 0 chr17 35186572 35186603 -50251877 + (TG)n Simple_repeat Simple_repeat 1 31 0 263 309 163 0 chr17 35187105 35187228 -50251252 + MIR3 SINE MIR 66 208 0 1016 240 36 12 chr17 35187405 35187655 -50250825 + MIR SINE MIR 7 262 0 469 298 47 38 chr17 35188554 35188789 -50249691 + L2 LINE L2 2417 2653 -661 1031 260 215 14 chr17 35188796 35189215 -50249265 - MLT1J LTR MaLR 0 511 9 296 325 6 57 chr17 35189245 35189402 -50249078 + L2 LINE L2 2717 2865 -449 824 291 31 14 chr17 35189650 35189939 -50248541 + LTR16C LTR ERVL 198 491 0 845 346 40 52 chr17 35190168 35190486 -50247994 + MERVL LTR ERVL 465 775 -4221 2315 93 0 14 chr17 35190486 35190805 -50247675 + AluSq SINE Alu 1 315 0 845 346 40 52 chr17 35190805 35191063 -50247417 + MERVL LTR ERVL 775 1035 -3961 1651 330 69 33 chr17 35191159 35192230 -50246250 + MERVL LTR ERVL 1311 2420 -3344 987 349 64 32 chr17 35192247 35193122 -50245358 + MERVL LTR ERVL 4378 5280 -205 775 256 99 52 chr17 35193424 35193806 -50244674 + LTR16C LTR ERVL 92 491 0 246 333 0 0 chr17 35193908 35193989 -50244491 + L2 LINE L2 3188 3268 -4 286 319 117 18 chr17 35194842 35195005 -50243475 - MIR SINE MIR -11 251 73 381 345 128 23 chr17 35195882 35196320 -50242160 - L2 LINE L2 -19 3294 2811 562 253 37 131 chr17 35196774 35197050 -50241430 - MER102a DNA MER1_type -1098 319 81 1628 187 29 4 chr17 35197050 35197328 -50241152 + AluJb SINE Alu 13 297 -15 562 253 37 131 chr17 35197328 35197403 -50241077 - MER102a DNA MER1_type -1336 81 1 217 222 48 32 chr17 35197408 35197471 -50241009 - MIR SINE MIR -111 151 88 182 267 27 53 chr17 35198353 35198428 -50240052 + L2 LINE L2 3139 3211 -61 208 244 0 0 chr17 35198558 35198599 -50239881 + MIR SINE MIR 104 144 -64 589 242 170 0 chr17 35198659 35198812 -50239668 + MER5A DNA MER1_type 4 182 -7 183 176 0 0 chr17 35198978 35199012 -50239468 + L2 LINE L2 3279 3312 -1 348 333 54 6 chr17 35199425 35199593 -50238887 - L3 LINE CR1 -19 1558 1383 273 294 90 111 chr17 35199636 35199915 -50238565 - L2 LINE L2 -8 3264 2992 292 257 46 66 chr17 35200161 35200313 -50238167 + L2 LINE L2 2871 3019 -253 2371 109 0 0 chr17 35201278 35201582 -50236898 + AluSc SINE Alu 1 304 -5 1967 153 3 10 chr17 35201650 35201964 -50236516 - AluJb SINE Alu 0 312 1 1113 250 8 32 chr17 35203063 35203315 -50235165 + MIR SINE MIR 17 262 0 1446 195 0 26 chr17 35203333 35203605 -50234875 - AluJo SINE Alu -36 276 12 340 220 69 75 chr17 35203718 35203896 -50234584 + MER20B DNA MER1_type 37 217 -2 248 130 22 0 chr17 35204025 35204071 -50234409 + CT-rich Low_complexity Low_complexity 4 50 0 249 355 91 9 chr17 35204073 35204183 -50234297 - L2 LINE L2 -31 3241 3123 437 210 193 0 chr17 35205298 35205417 -50233063 + MIR SINE MIR 52 193 -69 544 316 54 29 chr17 35206399 35206750 -50231730 - L1ME4a LINE L1 -233 5888 5529 543 231 8 8 chr17 35206806 35206927 -50231553 + MIR3 SINE MIR 67 187 -21 595 291 38 26 chr17 35207248 35207460 -50231020 + MIR SINE MIR 34 246 -16 753 250 41 0 chr17 35208649 35208845 -50229635 + MER58A DNA MER1_type 1 204 -20 301 334 73 42 chr17 35209789 35210125 -50228355 + L2 LINE L2 2709 3053 -219 271 259 37 0 chr17 35210523 35210604 -50227876 + MER20B DNA MER1_type 56 139 -644 2530 74 0 3 chr17 35210724 35211034 -50227446 - AluY SINE Alu 0 311 3 1328 216 92 18 chr17 35211043 35211478 -50227002 + MER20B DNA MER1_type 287 753 -30 338 190 0 13 chr17 35213184 35213263 -50225217 + MER53 DNA DNA 104 181 -8 189 268 0 0 chr17 35213621 35213662 -50224818 - MIR3 SINE MIR -49 159 119 302 347 20 20 chr17 35213921 35214071 -50224409 + L2 LINE L2 2703 2852 -462 240 189 113 0 chr17 35214435 35214488 -50223992 + L2 LINE L2 3234 3292 -21 426 39 0 0 chr17 35214496 35214548 -50223932 + (TGGA)n Simple_repeat Simple_repeat 1 52 0 491 273 0 0 chr17 35214552 35214662 -50223818 + MIR SINE MIR 30 139 -69 240 261 117 127 chr17 35215339 35215765 -50222715 + L2 LINE L2 2822 3243 -29 1915 146 0 0 chr17 35215896 35216171 -50222309 - AluJb SINE Alu -29 283 9 888 156 24 33 chr17 35216308 35216520 -50221960 + Charlie5 DNA MER1_type 2376 2585 -27 693 261 148 5 chr17 35216520 35216723 -50221757 + MIR SINE MIR 31 262 0 328 213 0 0 chr17 35216830 35216891 -50221589 - L2 LINE L2 -3 3310 3250 237 271 29 0 chr17 35216919 35216989 -50221491 - L2 LINE L2 0 3313 3242 656 239 74 32 chr17 35218268 35218463 -50220017 + MIR SINE MIR 3 211 -51 186 200 156 0 chr17 35219094 35219139 -50219341 + L2 LINE L2 3139 3190 -82 735 306 17 44 chr17 35220155 35220449 -50218031 - L3 LINE CR1 -76 1501 1216 262 235 374 18 chr17 35220502 35220668 -50217812 + MIR SINE MIR 28 252 -10 497 263 159 29 chr17 35221460 35221946 -50216534 + MLT1H LTR MaLR 21 555 0 * 799 247 62 54 chr17 35221946 35222297 -50216183 - LTR16C LTR ERVL -30 461 108 3119 215 44 8 chr17 35222476 35223221 -50215259 + MER20B DNA MER1_type 7 778 -5 211 231 58 0 chr17 35223347 35223399 -50215081 - L2 LINE L2 -219 3053 2999 316 244 11 78 chr17 35223500 35223590 -50214890 - MIR SINE MIR -119 143 60 599 289 146 19 chr17 35223656 35223762 -50214718 - L2 LINE L2 -7 3306 3215 1152 160 68 5 chr17 35223762 35223968 -50214512 - MER20B DNA MER1_type 0 219 1 599 289 146 19 chr17 35223968 35224169 -50214311 - L2 LINE L2 -98 3215 2960 930 162 0 0 chr17 35224174 35224353 -50214127 + (CAT)n Simple_repeat Simple_repeat 1 179 0 526 222 79 0 chr17 35224376 35224502 -50213978 - MIR SINE MIR -15 247 112 295 259 175 42 chr17 35224498 35224587 -50213893 - L2 LINE L2 -356 2958 2882 * 2109 120 3 0 chr17 35224587 35224900 -50213580 + AluSq SINE Alu 1 314 0 295 259 175 42 chr17 35224900 35224952 -50213528 - L2 LINE L2 -432 2882 2797 1063 243 58 37 chr17 35224998 35225323 -50213157 + LTR16A LTR ERVL 81 412 -38 1679 290 145 14 chr17 35225364 35226196 -50212284 - L2 LINE L2 -534 2780 1840 413 309 56 6 chr17 35226885 35227047 -50211433 - MIR SINE MIR -61 201 32 234 271 29 14 chr17 35227057 35227127 -50211353 + MIR3 SINE MIR 116 186 -22 185 204 48 117 chr17 35227939 35228042 -50210438 - L2 LINE L2 -155 3117 3022 249 264 44 55 chr17 35228248 35228339 -50210141 - MIR3 SINE MIR 0 208 119 311 208 22 49 chr17 35228609 35228720 -50209760 - MIR SINE MIR -62 146 76 183 349 0 0 chr17 35229036 35229099 -50209381 - MIR SINE MIR -90 172 110 523 294 128 9 chr17 35229137 35229355 -50209125 + MIR SINE MIR 18 261 -1 256 286 152 0 chr17 35229552 35229664 -50208816 + MIR SINE MIR 81 209 -53 223 317 12 0 chr17 35230293 35230375 -50208105 + (TTCA)n Simple_repeat Simple_repeat 2 84 0 268 378 84 19 chr17 35230671 35230933 -50207547 + L2 LINE L2 2600 2878 -436 252 351 80 53 chr17 35230993 35231295 -50207185 + L2 LINE L2 2931 3240 -32 406 244 149 21 chr17 35231401 35231604 -50206876 + MIR SINE MIR 33 262 0 322 315 54 34 chr17 35231608 35231757 -50206723 + MIR SINE MIR 52 203 -59 192 318 63 0 chr17 35232235 35232298 -50206182 - L2 LINE L2 -35 3237 3171 473 261 48 53 chr17 35232553 35232741 -50205739 - MIR SINE MIR -56 206 20 313 312 76 13 chr17 35233301 35233458 -50205022 + MIR3 SINE MIR 34 200 -8 185 264 154 45 chr17 35233649 35233759 -50204721 + MIR SINE MIR 32 153 -109 215 310 0 23 chr17 35234530 35234617 -50203863 + G-rich Low_complexity Low_complexity 5 89 0 1628 184 74 0 chr17 35234934 35235217 -50203263 - AluJb SINE Alu -8 304 1 614 299 51 0 chr17 35235511 35235725 -50202755 + MIR SINE MIR 31 255 -7 212 296 0 0 chr17 35235733 35235777 -50202703 + C-rich Low_complexity Low_complexity 3 46 0 273 158 53 18 chr17 35236381 35236438 -50202042 - MIR3 SINE MIR -53 155 97 453 223 32 45 chr17 35236580 35236737 -50201743 + L1ME3A LINE L1 6016 6170 0 182 318 34 23 chr17 35237242 35237330 -50201150 - MIR SINE MIR -87 121 33 182 286 14 43 chr17 35237821 35237891 -50200589 - L2 LINE L2 -4 3309 3242 2214 129 7 0 chr17 35238390 35238692 -50199788 + AluSg SINE Alu 1 304 -6 537 272 171 42 chr17 35238883 35239170 -50199310 + L2 LINE L2 2990 3313 0 201 74 0 0 chr17 35239332 35239359 -50199121 + (CA)n Simple_repeat Simple_repeat 1 27 0 438 231 74 8 chr17 35239421 35239542 -50198938 + MIR SINE MIR 134 262 0 272 171 46 0 chr17 35239544 35239594 -50198886 - MIR SINE MIR -85 123 71 522 299 58 33 chr17 35240280 35240493 -50197987 + MIR SINE MIR 35 256 -6 700 335 10 0 chr17 35241072 35241266 -50197214 + MER91A DNA MER1_type 1 196 0 224 324 99 9 chr17 35241420 35241531 -50196949 + L2 LINE L2 3152 3272 0 239 270 0 72 chr17 35241542 35241653 -50196827 + GA-rich Low_complexity Low_complexity 5 107 0 1819 171 19 45 chr17 35241821 35241966 -50196514 + MLT1A1 LTR MaLR 1 148 -217 1727 165 157 9 chr17 35241966 35242311 -50196169 + MSTD LTR MaLR 1 396 0 1819 171 19 45 chr17 35242311 35242540 -50195940 + MLT1A1 LTR MaLR 148 365 0 692 217 94 42 chr17 35242924 35243136 -50195344 + MIR SINE MIR 13 235 -27 293 363 22 37 chr17 35243378 35243648 -50194832 + L1MD2 LINE L1 21 286 -6254 10447 226 59 26 chr17 35244159 35246435 -50192045 + L1MD2 LINE L1 916 3116 -3444 1819 159 21 10 chr17 35246435 35246725 -50191755 - AluJo SINE Alu -18 294 2 10447 226 59 26 chr17 35246725 35247270 -50191210 + L1MD2 LINE L1 3116 3642 -2918 1670 199 48 11 chr17 35247270 35247622 -50190858 + MLT1A1 LTR MaLR 1 365 0 10447 226 59 26 chr17 35247622 35248914 -50189566 + L1MD2 LINE L1 3642 4890 -1670 4800 23 2 9 chr17 35248914 35249483 -50188997 + L1PA4 LINE L1 5591 6155 0 10447 226 59 26 chr17 35249483 35249929 -50188551 + L1MD2 LINE L1 4890 5320 -1240 1968 155 6 25 chr17 35249929 35250246 -50188234 - AluSx SINE Alu -1 311 1 10447 226 59 26 chr17 35250246 35250498 -50187982 + L1MD2 LINE L1 5320 5829 -731 1151 159 0 0 chr17 35250500 35250670 -50187810 + FRAM SINE Alu 1 169 -7 2659 203 92 6 chr17 35250684 35251328 -50187152 + L1MD2 LINE L1 5834 6532 -221 2294 68 36 0 chr17 35251722 35252002 -50186478 - AluSg SINE Alu -14 296 7 319 248 70 57 chr17 35252423 35252580 -50185900 + L2 LINE L2 2949 3107 -165 199 231 215 0 chr17 35252672 35252737 -50185743 + L2 LINE L2 3192 3270 -2 287 311 92 0 chr17 35252937 35253056 -50185424 + MIR SINE MIR 16 145 -63 766 300 58 0 chr17 35253884 35254107 -50184373 + MIR SINE MIR 27 262 0 459 313 44 40 chr17 35254182 35254409 -50184071 + MIR SINE MIR 6 233 -29 792 281 70 42 chr17 35254583 35254942 -50183538 + MLT1H LTR MaLR 1 369 -180 1020 304 48 24 chr17 35255068 35255440 -50183040 - MLT1K LTR MaLR -206 382 2 681 82 20 0 chr17 35256115 35256213 -50182267 + MSTC LTR MaLR 1 100 -328 3306 74 21 0 chr17 35256213 35256648 -50181832 + L1PA10 LINE L1 5721 6164 -4 2001 140 14 29 chr17 35256793 35257142 -50181338 + MSTC LTR MaLR 85 428 0 775 192 33 22 chr17 35257602 35257784 -50180696 + MLT1B LTR MaLR 4 187 -187 519 128 10 87 chr17 35257797 35257992 -50180488 + (TCTCCC)n Simple_repeat Simple_repeat 1 180 0 238 143 20 20 chr17 35257996 35258045 -50180435 + CT-rich Low_complexity Low_complexity 1 49 0 941 196 11 0 chr17 35258059 35258243 -50180237 + MLT1B LTR MaLR 205 390 0 214 316 74 11 chr17 35258272 35258367 -50180113 - MIR SINE MIR -43 219 119 309 297 59 10 chr17 35258544 35258645 -50179835 - MIR SINE MIR -69 193 88 1992 184 39 11 chr17 35258651 35259010 -50179470 + LTR32 LTR ERVL 14 382 -89 2456 84 0 0 chr17 35259017 35259326 -50179154 + AluY SINE Alu 1 309 -2 195 69 0 0 chr17 35259330 35259359 -50179121 + (CAAAAA)n Simple_repeat Simple_repeat 4 32 0 563 129 0 0 chr17 35259362 35259447 -50179033 + LTR32 LTR ERVL 382 466 -5 188 244 0 0 chr17 35259622 35259663 -50178817 + L2 LINE L2 3268 3308 -5 529 256 264 34 chr17 35259928 35260287 -50178193 + L2 LINE L2 2839 3294 -19 2193 119 3 0 chr17 35260287 35260580 -50177900 - AluSx SINE Alu -18 294 1 529 256 264 34 chr17 35260580 35260606 -50177874 + L2 LINE L2 3294 3313 0 203 133 0 0 chr17 35260900 35260930 -50177550 + (GGCTG)n Simple_repeat Simple_repeat 5 34 0 2132 119 0 0 chr17 35261418 35261696 -50176784 + AluSq SINE Alu 17 294 -19 467 210 25 76 chr17 35262524 35262681 -50175799 - LTR67 LTR ERVL -398 159 11 243 336 91 28 chr17 35262711 35262964 -50175516 + L2 LINE L2 2301 2569 -745 336 202 58 29 chr17 35263141 35263245 -50175235 - MLT1J LTR MaLR -9 502 396 433 216 168 0 chr17 35263440 35263565 -50174915 - MLT1J LTR MaLR -364 147 2 440 347 34 11 chr17 35263637 35263813 -50174667 - MIR SINE MIR -70 192 13 372 250 117 23 chr17 35263800 35263928 -50174552 + L2 LINE L2 3174 3313 0 * 672 163 0 0 chr17 35264073 35264202 -50174278 + (TG)n Simple_repeat Simple_repeat 1 129 0 1751 161 0 39 chr17 35264307 35264617 -50173863 - AluJo SINE Alu -14 298 1 900 220 48 0 chr17 35264712 35264918 -50173562 - MIR SINE MIR -3 259 45 270 220 0 17 chr17 35265030 35265089 -50173391 - MIR SINE MIR -63 145 88 1999 136 0 0 chr17 35265973 35266298 -50172182 + AluSx SINE Alu 1 312 0 449 270 106 61 chr17 35266376 35266743 -50171737 - MLT1H LTR MaLR -22 387 57 551 198 217 32 chr17 35266823 35266980 -50171500 + MER5A DNA MER1_type 4 189 0 384 335 47 75 chr17 35267058 35267380 -50171100 + L2 LINE L2 2944 3256 -16 216 0 0 0 chr17 35268014 35268038 -50170442 + (A)n Simple_repeat Simple_repeat 1 24 0 205 250 0 0 chr17 35269810 35269850 -50168630 - MIR SINE MIR -138 70 31 295 241 0 46 chr17 35270854 35270941 -50167539 + MIR3 SINE MIR 91 173 -35 293 243 303 6 chr17 35271211 35271358 -50167122 + MIR SINE MIR 3 190 -72 686 299 17 37 chr17 35271844 35272096 -50166384 + MIR SINE MIR 6 252 -10 312 272 49 12 chr17 35272144 35272225 -50166255 - L2 LINE L2 -47 3225 3142 241 234 121 32 chr17 35272755 35272879 -50165601 + MIR3 SINE MIR 20 154 -54 228 328 22 44 chr17 35273096 35273279 -50165201 - MARNA DNA Mariner -12 574 396 529 293 102 45 chr17 35273482 35273999 -50164481 + L2 LINE L2 2717 3268 -4 374 220 108 128 chr17 35274049 35274299 -50164181 - MIR SINE MIR -2 260 16 196 268 37 24 chr17 35274348 35274430 -50164050 - MIR3 SINE MIR -29 179 97 213 245 0 0 chr17 35275168 35275217 -50163263 + (TA)n Simple_repeat Simple_repeat 2 50 0 827 77 29 164 chr17 35275282 35275489 -50162991 - L1MA7 LINE L1 -2 6289 6111 286 257 224 26 chr17 35275719 35275871 -50162609 - MIR SINE MIR -33 229 48 269 346 10 20 chr17 35276763 35276864 -50161616 + MER81 DNA DNA 13 112 -2 406 154 33 0 chr17 35277152 35277243 -50161237 + CT-rich Low_complexity Low_complexity 1 94 0 * 711 366 12 0 chr17 35277232 35277396 -50161084 + C-rich Low_complexity Low_complexity 3 168 0 360 0 0 0 chr17 35277396 35277436 -50161044 + (TTCC)n Simple_repeat Simple_repeat 1 40 0 1971 112 27 3 chr17 35277436 35277730 -50160750 - AluSx SINE Alu -11 301 1 341 264 27 64 chr17 35278079 35278189 -50160291 + MIR3 SINE MIR 82 187 -21 * 440 224 84 28 chr17 35278160 35278303 -50160177 + MER5A DNA MER1_type 17 167 -22 517 131 81 20 chr17 35278471 35278570 -50159910 + MIR SINE MIR 85 189 -73 292 250 140 0 chr17 35279477 35279577 -50158903 + MIR SINE MIR 34 147 -115 192 385 22 11 chr17 35280081 35280172 -50158308 - MIR SINE MIR -87 121 30 222 267 0 17 chr17 35280191 35280251 -50158229 + (TAA)n Simple_repeat Simple_repeat 3 61 0 940 268 63 0 chr17 35280251 35280490 -50157990 - MIR SINE MIR 0 262 9 302 341 53 8 chr17 35281020 35281164 -50157316 - MIR3 SINE MIR -62 146 11 201 233 23 0 chr17 35281813 35281856 -50156624 + G-rich Low_complexity Low_complexity 4 47 0 1685 163 3 0 chr17 35281946 35282229 -50156251 - AluJb SINE Alu -28 284 1 604 242 110 48 chr17 35283435 35283662 -50154818 + MIR SINE MIR 2 242 -20 345 305 9 9 chr17 35283737 35283842 -50154638 + MIR SINE MIR 17 121 -87 559 244 122 6 chr17 35284587 35284743 -50153737 - MIR SINE MIR -21 241 68 588 244 88 31 chr17 35285517 35285710 -50152770 - MIR SINE MIR -52 210 7 420 283 0 0 chr17 35285776 35285868 -50152612 + MIR3 SINE MIR 108 199 -9 6350 78 24 3 chr17 35285882 35286732 -50151748 + L1PA11 LINE L1 5307 6173 -1 470 79 13 0 chr17 35287710 35287786 -50150694 + (TG)n Simple_repeat Simple_repeat 1 77 0 401 265 17 26 chr17 35288001 35288118 -50150362 + MIR3 SINE MIR 79 194 -14 400 148 10 50 chr17 35288299 35288400 -50150080 - L1MA8 LINE L1 0 6291 6195 1573 204 10 20 chr17 35288780 35289074 -50149406 - AluJb SINE Alu -11 291 1 462 318 73 34 chr17 35289271 35289357 -50149123 - MIR SINE MIR -8 254 173 1168 208 29 123 chr17 35289357 35289770 -50148710 - MLT1A2 LTR MaLR 0 374 1 462 318 73 34 chr17 35289770 35289862 -50148618 - MIR SINE MIR -89 173 69 278 284 31 71 chr17 35291697 35291824 -50146656 - L2 LINE L2 -8 3264 3143 339 244 119 9 chr17 35292853 35292965 -50145515 - MIR SINE MIR -66 142 31 313 276 142 67 chr17 35293135 35293336 -50145144 - MIR SINE MIR -3 259 36 1953 198 10 57 chr17 35293336 35293825 -50144655 + MER31B LTR ERV1 1 466 0 313 276 142 67 chr17 35293825 35293862 -50144618 - MIR SINE MIR -226 36 3 401 287 81 15 chr17 35293878 35294014 -50144466 + MIR SINE MIR 28 172 -90 189 321 149 16 chr17 35293990 35294049 -50144431 - MIR SINE MIR 0 262 212 * 2127 135 0 0 chr17 35294049 35294360 -50144120 - AluSx SINE Alu -1 311 1 189 321 149 16 chr17 35294360 35294489 -50143991 - MIR SINE MIR -50 212 45 * 193 271 133 73 chr17 35294412 35294563 -50143917 + MIR3 SINE MIR 42 201 -7 192 383 32 0 chr17 35294750 35294844 -50143636 - L3b LINE CR1 -330 1253 1157 255 125 0 0 chr17 35295144 35295184 -50143296 + (A)n Simple_repeat Simple_repeat 1 40 0 431 250 19 28 chr17 35295460 35295568 -50142912 + MIR SINE MIR 2 108 -154 * 1433 274 124 31 chr17 35295490 35296103 -50142377 + L2 LINE L2 2112 2781 -533 333 0 0 0 chr17 35296236 35296273 -50142207 + (TG)n Simple_repeat Simple_repeat 2 38 0 356 223 114 60 chr17 35296477 35296643 -50141837 - MER5A DNA MER1_type -3 186 12 486 279 42 82 chr17 35297294 35297986 -50140494 - L1MEd LINE L1 -4618 1513 962 690 214 0 0 chr17 35298009 35298135 -50140345 - FLAM_C SINE Alu -17 126 1 425 289 18 0 chr17 35298256 35298370 -50140110 - L2 LINE L2 -8 3305 3190 622 318 52 9 chr17 35298372 35298605 -50139875 - L1MEd LINE L1 -5316 803 561 4678 213 42 19 chr17 35298780 35300741 -50137739 - L1MB4 LINE L1 -29 6151 4075 275 70 0 23 chr17 35301338 35301381 -50137099 + (GA)n Simple_repeat Simple_repeat 1 42 0 209 300 0 0 chr17 35302067 35302117 -50136363 - L2 LINE L2 -83 3189 3140 180 277 0 0 chr17 35302156 35302203 -50136277 - L2 LINE L2 -87 3226 3180 454 309 28 60 chr17 35302492 35302709 -50135771 - L1MC4 LINE L1 -6 8036 7827 1521 224 120 28 chr17 35302734 35302979 -50135501 - L1ME2 LINE L1 -13 6151 5930 1512 177 56 0 chr17 35302979 35303271 -50135209 - AluJb SINE Alu 0 308 2 1521 224 120 28 chr17 35303271 35303556 -50134924 - L1ME2 LINE L1 -234 5930 5569 * 4626 243 90 34 chr17 35303542 35305416 -50133064 - L1ME2 LINE L1 -795 5351 3240 2801 10 0 0 chr17 35305576 35305888 -50132592 - AluYb8 SINE Alu -6 312 1 231 276 221 21 chr17 35306337 35306482 -50131998 + L2 LINE L2 3140 3313 0 320 331 126 11 chr17 35306869 35307075 -50131405 - MIR SINE MIR 0 262 34 194 365 40 0 chr17 35307196 35307270 -50131210 + L2 LINE L2 2893 2969 -345 189 121 0 0 chr17 35307633 35307666 -50130814 + (ATG)n Simple_repeat Simple_repeat 2 34 0 1424 231 33 17 chr17 35307669 35308028 -50130452 - MLT1A1 LTR MaLR 0 365 1 755 219 107 16 chr17 35308045 35308237 -50130243 - MIR SINE MIR -35 227 23 642 321 37 20 chr17 35308261 35308507 -50129973 - MIR SINE MIR 0 262 13 366 356 88 21 chr17 35308526 35308720 -50129760 - L3 LINE CR1 -6 1571 1365 223 357 89 0 chr17 35309283 35309395 -50129085 - MIR3 SINE MIR -21 187 66 185 222 0 0 chr17 35309402 35309438 -50129042 + L2 LINE L2 3276 3311 -2 * 572 283 114 59 chr17 35309437 35309636 -50128844 - L3 LINE CR1 -1 1576 1355 2040 140 58 0 chr17 35309636 35309965 -50128515 - MER7A DNA MER2_type 0 346 1 572 283 114 59 chr17 35309965 35310055 -50128425 - L3 LINE CR1 -222 1355 1271 2282 121 36 36 chr17 35310266 35310630 -50127850 + THE1B LTR MaLR 1 364 0 1604 189 0 10 chr17 35312775 35313081 -50125399 + AluJo SINE Alu 1 303 -9 534 230 101 40 chr17 35313316 35313464 -50125016 + MIR SINE MIR 49 205 -57 702 272 23 37 chr17 35313469 35313686 -50124794 - MER21B LTR ERV1 -77 786 573 4199 111 44 47 chr17 35313690 35314410 -50124070 - LTR8A LTR ERV1 -3 724 7 1744 221 58 103 chr17 35314426 35315011 -50123469 - MER21B LTR ERV1 -289 574 16 307 158 18 18 chr17 35315016 35315073 -50123407 + Tigger5 DNA MER2_type 23 79 -2244 231 100 0 0 chr17 35315104 35315134 -50123346 + Tigger5 DNA MER2_type 2294 2323 0 883 146 0 22 chr17 35315268 35315405 -50123075 - AluJo SINE Alu -178 134 1 270 293 187 49 chr17 35315405 35315774 -50122706 - L2 LINE L2 -6 3266 2847 1920 60 4 22 chr17 35316421 35316689 -50121791 - L1PA7 LINE L1 -421 5733 5471 3310 49 5 2 chr17 35316689 35317113 -50121367 + L1PA7 LINE L1 5725 6151 -3 1019 277 55 13 chr17 35317774 35318263 -50120217 - L2 LINE L2 -38 3275 2759 660 294 77 13 chr17 35318799 35319034 -50119446 + MIR SINE MIR 12 261 -1 278 325 76 6 chr17 35319361 35319518 -50118962 + MIR3 SINE MIR 9 176 -32 204 67 0 0 chr17 35319549 35319579 -50118901 + (A)n Simple_repeat Simple_repeat 1 30 0 493 321 40 27 chr17 35321366 35321590 -50116890 + MIR SINE MIR 8 234 -28 208 395 28 18 chr17 35321657 35321766 -50116714 + L2 LINE L2 3163 3272 0 820 283 207 6 chr17 35322270 35322766 -50115714 + L2 LINE L2 2732 3313 0 782 279 66 26 chr17 35323830 35324260 -50114220 + L2 LINE L2 2755 3201 -112 458 206 47 0 chr17 35324265 35324372 -50114108 + MLT1D LTR MaLR 393 504 -1 260 339 17 9 chr17 35325152 35325267 -50113213 + MIR SINE MIR 37 152 -110 741 239 112 16 chr17 35325269 35325520 -50112960 + MER46C DNA MER2_type 1 275 -63 456 281 43 0 chr17 35325617 35325756 -50112724 - MIR SINE MIR -69 193 49 532 198 0 0 chr17 35326060 35326156 -50112324 - FRAM SINE Alu -81 95 1 227 267 17 0 chr17 35326645 35326705 -50111775 + L3 LINE CR1 715 775 -802 394 276 218 46 chr17 35326706 35327101 -50111379 + L3 LINE CR1 740 1202 -375 1745 117 84 44 chr17 35327165 35327350 -50111130 - AluJb SINE Alu -2 310 107 2327 97 0 0 chr17 35327350 35327638 -50110842 - AluSx SINE Alu -11 301 14 1745 117 84 44 chr17 35327638 35327750 -50110730 - AluJb SINE Alu -205 107 1 196 238 0 0 chr17 35327815 35327857 -50110623 + L3b LINE CR1 1345 1386 -197 1907 183 36 21 chr17 35328979 35329399 -50109081 + MSTB LTR MaLR 1 426 0 237 316 53 9 chr17 35329691 35329805 -50108675 - L3 LINE CR1 -101 1476 1358 254 262 60 54 chr17 35329921 35330070 -50108410 + MIR SINE MIR 28 177 -85 545 295 13 62 chr17 35330071 35330295 -50108185 + MIR SINE MIR 2 214 -48 759 226 24 0 chr17 35330295 35330463 -50108017 + MIR SINE MIR 90 261 -1 186 143 0 0 chr17 35331155 35331190 -50107290 + (TGGGGG)n Simple_repeat Simple_repeat 1 35 0 422 224 215 48 chr17 35331366 35331590 -50106890 - MIR SINE MIR 0 262 5 243 213 164 0 chr17 35331909 35331970 -50106510 + L2 LINE L2 3199 3269 -3 836 205 47 64 chr17 35332348 35332645 -50105835 - LTR37A LTR ERV1 -2 424 133 265 316 21 0 chr17 35333085 35333180 -50105300 + GA-rich Low_complexity Low_complexity 1 97 0 2609 25 0 0 chr17 35333275 35333589 -50104891 + L1PA2 LINE L1 5842 6155 0 296 312 70 32 chr17 35333651 35333837 -50104643 + L2 LINE L2 2890 3082 -190 341 286 30 23 chr17 35333854 35333987 -50104493 + MIR SINE MIR 1 134 -128 252 296 0 0 chr17 35334199 35334280 -50104200 + MIR SINE MIR 179 259 -3 245 303 81 0 chr17 35334341 35334440 -50104040 + L2 LINE L2 3202 3308 -5 210 290 0 14 chr17 35335708 35335777 -50102703 - MIR SINE MIR -172 90 23 417 338 111 26 chr17 35336285 35336737 -50101743 + L2 LINE L2 2564 3054 -218 187 280 70 70 chr17 35336831 35336931 -50101549 - MIR SINE MIR -4 258 159 1454 251 91 19 chr17 35336951 35337425 -50101055 + MLT1G LTR MaLR 70 577 -13 505 274 4 0 chr17 35337433 35337575 -50100905 - MIR SINE MIR -41 167 21 309 310 101 0 chr17 35337611 35337740 -50100740 + L2 LINE L2 3122 3263 -9 834 263 21 8 chr17 35338648 35338888 -50099592 - MIR SINE MIR -3 259 17 315 226 12 48 chr17 35339431 35339515 -50098965 + L2 LINE L2 3233 3313 0 190 309 0 0 chr17 35340043 35340098 -50098382 - MIR SINE MIR -62 146 92 1798 161 42 44 chr17 35340112 35340196 -50098284 + MLT1A1 LTR MaLR 4 87 -278 2204 122 0 10 chr17 35340196 35340500 -50097980 + AluSg SINE Alu 1 301 -9 1798 161 42 44 chr17 35340500 35340776 -50097704 + MLT1A1 LTR MaLR 87 363 -2 309 322 8 8 chr17 35340876 35340994 -50097486 + (CATATA)n Simple_repeat Simple_repeat 4 121 0 1536 247 239 51 chr17 35341507 35341804 -50096676 + HAL1 LINE L1 37 277 -2230 817 140 0 22 chr17 35341804 35341940 -50096540 + FLAM_A SINE Alu 1 133 0 1536 247 239 51 chr17 35341940 35342888 -50095592 + HAL1 LINE L1 277 1516 -991 625 277 71 19 chr17 35342910 35343177 -50095303 + HAL1 LINE L1 1707 1987 -520 207 114 0 0 chr17 35344245 35344280 -50094200 + (TTA)n Simple_repeat Simple_repeat 2 36 0 590 206 48 27 chr17 35344301 35344447 -50094033 - MIR SINE MIR -51 211 63 2595 68 0 3 chr17 35344548 35344859 -50093621 - AluY SINE Alu -1 310 1 391 320 28 28 chr17 35344874 35344962 -50093518 - MIR SINE MIR -65 197 110 683 230 55 115 chr17 35344962 35345197 -50093283 + MER58A DNA MER1_type 4 224 0 391 320 28 28 chr17 35345197 35345286 -50093194 - MIR SINE MIR -151 111 20 406 248 48 0 chr17 35345443 35345548 -50092932 - MLT1L LTR MaLR -25 590 481 250 188 0 0 chr17 35345620 35345668 -50092812 - MLT1L LTR MaLR -241 374 327 435 277 88 13 chr17 35345751 35345910 -50092570 - MLT1L LTR MaLR -433 182 12 2331 113 0 0 chr17 35345982 35346283 -50092197 - AluSx SINE Alu -11 301 1 342 123 0 0 chr17 35346793 35346850 -50091630 + (TC)n Simple_repeat Simple_repeat 1 57 0 212 185 19 0 chr17 35347352 35347406 -50091074 + (CA)n Simple_repeat Simple_repeat 2 56 0 1144 153 5 0 chr17 35347947 35348150 -50090330 + L1PB1 LINE L1 5947 6150 -1 230 311 83 23 chr17 35349057 35349189 -50089291 - L2 LINE L2 -457 2857 2718 597 264 145 15 chr17 35350220 35350489 -50087991 + MLT1L LTR MaLR 308 611 -4 190 305 136 25 chr17 35350492 35350610 -50087870 + MIR3 SINE MIR 47 177 -31 426 253 240 0 chr17 35350918 35351064 -50087416 - MER5A DNA MER1_type -5 184 4 319 282 94 8 chr17 35351168 35351285 -50087195 + MIR SINE MIR 22 148 -114 2416 71 3 3 chr17 35351287 35351582 -50086898 + AluY SINE Alu 1 295 -16 534 225 22 51 chr17 35352027 35352165 -50086315 - MIR3 SINE MIR -34 174 41 215 278 19 0 chr17 35352748 35352802 -50085678 - L2 LINE L2 -84 3188 3134 542 243 77 18 chr17 35353737 35353906 -50084574 + MIR3 SINE MIR 15 193 -15 2067 170 112 51 chr17 35354543 35355054 -50083426 + MLT1F LTR MaLR 1 542 0 2311 182 117 2 chr17 35355060 35355548 -50082932 - MER74A LTR ERVL 0 558 15 342 276 85 98 chr17 35355932 35356330 -50082150 + L2 LINE L2 2880 3272 0 228 233 17 0 chr17 35356345 35356405 -50082075 + MIR SINE MIR 85 145 -63 183 100 0 0 chr17 35356406 35356436 -50082044 + (CAT)n Simple_repeat Simple_repeat 2 31 0 191 265 59 15 chr17 35357031 35357099 -50081381 + MIR SINE MIR 27 97 -111 698 298 76 16 chr17 35357643 35357958 -50080522 - MLT1J1 LTR MaLR 0 446 113 211 191 0 43 chr17 35358053 35358100 -50080380 + MIR3 SINE MIR 115 159 -49 310 291 101 76 chr17 35358102 35358260 -50080220 - MIR3 SINE MIR -16 192 31 467 282 64 26 chr17 35358306 35358462 -50080018 - MIR SINE MIR -50 212 51 1466 249 90 49 chr17 35358677 35359368 -50079112 + MER72 LTR ERV1 4 722 0 1137 263 36 0 chr17 35359411 35359712 -50078768 - MLT1J LTR MaLR -110 401 90 393 343 62 0 chr17 35359716 35359894 -50078586 + MIR SINE MIR 68 256 -6 198 0 0 0 chr17 35361113 35361135 -50077345 + (CAA)n Simple_repeat Simple_repeat 3 24 0 290 198 99 0 chr17 35361200 35361281 -50077199 - L2 LINE L2 -34 3238 3150 632 282 61 14 chr17 35361646 35361859 -50076621 + MIR SINE MIR 17 239 -23 1399 209 151 2 chr17 35362744 35363160 -50075320 - Charlie4a DNA MER1_type -1 507 30 470 206 361 6 chr17 35363201 35363381 -50075099 + MIR SINE MIR 5 248 -14 497 240 7 52 chr17 35363871 35364025 -50074455 + MIR3 SINE MIR 62 208 0 440 240 22 34 chr17 35364149 35364302 -50074178 + MLT1I LTR MaLR 58 203 -206 189 0 0 0 chr17 35365406 35365427 -50073053 + (TAAA)n Simple_repeat Simple_repeat 4 24 0 611 261 131 7 chr17 35367537 35367828 -50070652 + L1ME4a LINE L1 5784 6110 -11 212 259 0 102 chr17 35367959 35368156 -50070324 + GA-rich Low_complexity Low_complexity 2 178 0 501 274 95 17 chr17 35369290 35369469 -50069011 + L3 LINE CR1 1384 1576 -1 303 410 7 0 chr17 35370066 35370210 -50068270 + L3 LINE CR1 1329 1473 -104 550 278 65 29 chr17 35370223 35370698 -50067782 + LTR33 LTR ERVL 4 521 0 237 248 221 9 chr17 35370884 35370997 -50067483 - MIR3 SINE MIR -59 149 13 326 299 52 82 chr17 35371730 35371924 -50066556 - MIR SINE MIR -65 197 10 932 258 182 31 chr17 35371924 35372347 -50066133 - LTR16C LTR ERVL 0 491 5 218 292 0 22 chr17 35372900 35372989 -50065491 + MIR3 SINE MIR 3 89 -119 204 239 82 141 chr17 35373241 35373425 -50065055 + L2 LINE L2 3027 3199 -73 3673 116 11 15 chr17 35373889 35374417 -50064063 + MER1A DNA MER1_type 1 526 -1 272 337 59 0 chr17 35374572 35374673 -50063807 - MIR SINE MIR -63 145 39 278 278 67 0 chr17 35375023 35375113 -50063367 - MIR3 SINE MIR -27 181 86 377 314 44 7 chr17 35375144 35375281 -50063199 + MIR SINE MIR 11 152 -110 250 279 0 15 chr17 35375426 35375494 -50062986 + CT-rich Low_complexity Low_complexity 1 67 0 974 253 37 4 chr17 35375689 35375934 -50062546 - MIR SINE MIR -1 261 9 210 158 0 0 chr17 35376053 35376091 -50062389 + A-rich Low_complexity Low_complexity 1 38 0 250 322 43 9 chr17 35376618 35376733 -50061747 - MIR3 SINE MIR -25 183 65 1707 223 97 46 chr17 35376983 35377540 -50060940 - MLT1E LTR MaLR 0 593 1 257 262 8 12 chr17 35377540 35377678 -50060802 + MIR SINE MIR 69 261 -1 380 320 16 8 chr17 35378477 35378599 -50059881 - MIR3 SINE MIR -48 160 38 645 235 132 4 chr17 35379183 35379467 -50059013 - HAL1b LINE L1 -1 2506 797 258 233 8 90 chr17 35379535 35379668 -50058812 - HAL1b LINE L1 -480 868 747 361 253 117 57 chr17 35379709 35380009 -50058471 - HAL1 LINE L1 -355 2152 1835 730 255 189 19 chr17 35380028 35380393 -50058087 - HAL1 LINE L1 -743 1764 1338 2703 226 38 38 chr17 35380476 35380807 -50057673 - L1ME3 LINE L1 -101 6061 5731 1597 182 0 7 chr17 35380807 35381093 -50057387 - L1PB4 LINE L1 -18 6138 5855 2703 226 38 38 chr17 35381093 35381586 -50056894 - L1ME3 LINE L1 -431 5731 5236 297 0 0 0 chr17 35381595 35381628 -50056852 + (TG)n Simple_repeat Simple_repeat 2 34 0 358 226 36 0 chr17 35381688 35381772 -50056708 - L1ME3 LINE L1 -101 6061 5975 595 275 12 83 chr17 35381809 35381894 -50056586 - L1ME3 LINE L1 -916 5230 5141 2072 114 29 0 chr17 35381894 35382192 -50056288 + AluSx SINE Alu 1 306 0 595 275 12 83 chr17 35382192 35382443 -50056037 - L1ME3 LINE L1 -1005 5141 4917 255 302 104 11 chr17 35382444 35382601 -50055879 - HAL1 LINE L1 -1155 1352 1174 240 35 0 0 chr17 35382601 35382630 -50055850 + (CA)n Simple_repeat Simple_repeat 2 30 0 255 302 104 11 chr17 35382630 35382654 -50055826 - HAL1 LINE L1 -1333 1174 1154 216 0 0 0 chr17 35382662 35382686 -50055794 + (CA)n Simple_repeat Simple_repeat 1 24 0 284 271 159 9 chr17 35383580 35383687 -50054793 - MIR SINE MIR -3 259 137 4499 155 20 29 chr17 35383695 35384541 -50053939 - L1MB7 LINE L1 -10 6174 5331 2152 144 0 0 chr17 35384541 35384839 -50053641 - AluSx SINE Alu -14 298 1 4499 155 20 29 chr17 35384839 35385057 -50053423 - L1MB7 LINE L1 -853 5331 5112 427 287 26 0 chr17 35385059 35385174 -50053306 - MIR SINE MIR -114 148 31 280 316 61 17 chr17 35385683 35385855 -50052625 - MIR3 SINE MIR -73 135 5 209 291 38 13 chr17 35386328 35386407 -50052073 + MIR SINE MIR 57 137 -71 1053 282 117 5 chr17 35386618 35386904 -50051576 + L2 LINE L2 2683 2936 -377 1160 143 84 5 chr17 35386904 35387107 -50051373 + MER20 DNA MER1_type 1 219 0 1053 282 117 5 chr17 35387107 35387338 -50051142 + L2 LINE L2 2936 3277 -36 241 280 65 32 chr17 35387315 35387408 -50051072 - MIR3 SINE MIR -27 181 86 * 1223 281 27 27 chr17 35387408 35387852 -50050628 + LTR16A LTR ERVL 1 444 -6 224 241 35 0 chr17 35388612 35388670 -50049810 + GA-rich Low_complexity Low_complexity 2 61 0 389 336 14 0 chr17 35389171 35389327 -50049153 + MIR3 SINE MIR 23 181 -27 369 344 120 10 chr17 35389571 35389763 -50048717 - MIR SINE MIR -7 255 43 552 286 146 19 chr17 35389917 35390130 -50048350 + MIR SINE MIR 10 249 -13 1945 238 71 18 chr17 35391238 35391890 -50046590 + L1ME LINE L1 10 695 -5375 643 251 13 54 chr17 35391951 35392215 -50046265 + MIR SINE MIR 8 256 -6 2265 113 0 0 chr17 35392306 35392625 -50045855 - AluSx SINE Alu 0 312 1 315 313 10 10 chr17 35392930 35393029 -50045451 - MIR3 SINE MIR -1 207 109 241 358 16 49 chr17 35393195 35393318 -50045162 - MIR SINE MIR -60 148 30 198 0 0 0 chr17 35393667 35393689 -50044791 + (TC)n Simple_repeat Simple_repeat 1 22 0 * 243 61 0 0 chr17 35393688 35393721 -50044759 + (CA)n Simple_repeat Simple_repeat 1 33 0 802 159 7 13 chr17 35394444 35394595 -50043885 - L1MB3 LINE L1 -2 6181 6032 379 228 18 35 chr17 35395559 35395673 -50042807 - L2 LINE L2 -261 3052 2941 252 250 0 0 chr17 35395796 35395852 -50042628 - MIR SINE MIR -65 143 88 391 259 170 7 chr17 35396032 35396167 -50042313 + MIR SINE MIR 20 176 -86 253 288 25 0 chr17 35397047 35397121 -50041359 + MIR SINE MIR 53 129 -128 1662 191 17 14 chr17 35397121 35397415 -50041065 + AluJo SINE Alu 1 295 -17 764 276 19 9 chr17 35397504 35397714 -50040766 + MIR SINE MIR 43 254 -8 217 222 19 19 chr17 35398811 35398865 -50039615 - L2 LINE L2 -9 3304 3251 1917 116 19 0 chr17 35399904 35400183 -50038297 + AluSx SINE Alu 21 304 0 399 188 150 45 chr17 35400189 35400322 -50038158 - MIR SINE MIR 0 262 116 465 276 47 37 chr17 35400449 35400666 -50037814 - MIR SINE MIR -34 228 7 385 313 125 44 chr17 35401335 35401696 -50036784 + L2 LINE L2 2863 3252 -20 490 299 137 5 chr17 35401853 35402057 -50036423 - MIR SINE MIR 0 262 32 803 224 39 0 chr17 35402675 35402831 -50035649 + FRAM SINE Alu 1 162 -4 247 222 51 72 chr17 35402873 35402975 -50035505 + MIR3 SINE MIR 83 171 -37 1750 179 10 17 chr17 35403060 35403362 -50035118 + AluJo SINE Alu 1 300 -12 802 259 45 5 chr17 35403420 35403640 -50034840 - MIR SINE MIR -15 247 19 183 306 306 0 chr17 35403725 35403833 -50034647 - MIR SINE MIR -19 243 103 180 306 49 42 chr17 35404817 35404961 -50033519 - L3b LINE CR1 -141 1442 1298 458 261 146 18 chr17 35405325 35405490 -50032990 + MIR SINE MIR 47 232 -30 505 266 44 59 chr17 35406325 35406528 -50031952 + MIR SINE MIR 47 246 -16 419 87 14 0 chr17 35406575 35406644 -50031836 + (CA)n Simple_repeat Simple_repeat 2 71 0 303 260 130 79 chr17 35407322 35407499 -50030981 - MIR SINE MIR -44 218 33 410 190 70 10 chr17 35408304 35408404 -50030076 - MER5B DNA MER1_type -72 106 1 588 236 75 105 chr17 35408429 35408696 -50029784 + L2 LINE L2 3014 3272 0 850 263 24 5 chr17 35409017 35409226 -50029254 + MIR SINE MIR 29 241 -21 268 179 141 77 chr17 35410222 35410300 -50028180 + MIR3 SINE MIR 87 169 -39 1828 223 16 83 chr17 35410331 35410888 -50027592 + MLT2B1 LTR ERVL 1 520 0 487 235 181 0 chr17 35411199 35411348 -50027132 + MIR SINE MIR 87 262 0 505 153 54 45 chr17 35411627 35411738 -50026742 - L1MC4 LINE L1 -382 7660 7549 781 273 46 28 chr17 35411777 35412059 -50026421 - L1MC4 LINE L1 -1015 7027 6741 337 111 95 0 chr17 35412062 35412125 -50026355 - Alu SINE Alu 0 302 234 496 282 46 66 chr17 35412125 35412195 -50026285 - L1MC4 LINE L1 -1232 6810 6740 2049 138 24 0 chr17 35412195 35412491 -50025989 - AluSx SINE Alu -9 303 1 496 282 46 66 chr17 35412491 35412661 -50025819 - L1MC4 LINE L1 -1302 6740 6575 2290 113 0 22 chr17 35413723 35414041 -50024439 - AluSx SINE Alu -1 311 1 252 284 0 15 chr17 35414374 35414441 -50024039 + MIR SINE MIR 2 67 -195 192 264 209 73 chr17 35414657 35414877 -50023603 - MIR SINE MIR -12 250 1 213 248 198 20 chr17 35414994 35415095 -50023385 + MIR3 SINE MIR 9 127 -81 220 232 130 14 chr17 35415239 35415308 -50023172 + MIR SINE MIR 157 233 -29 2619 46 10 0 chr17 35415332 35415636 -50022844 + AluY SINE Alu 1 307 -4 452 224 41 10 chr17 35416231 35416329 -50022151 + MIR3 SINE MIR 98 198 -10 873 142 0 0 chr17 35416434 35416561 -50021919 - FLAM_C SINE Alu -6 127 1 330 249 140 35 chr17 35416672 35416799 -50021681 + MIR SINE MIR 66 199 -63 798 180 112 12 chr17 35417132 35417293 -50021187 + MER45A DNA AcHobo 1 177 -1 1779 193 0 7 chr17 35417693 35417999 -50020481 - AluJb SINE Alu -8 304 1 1782 181 13 7 chr17 35418007 35418316 -50020164 - AluJo SINE Alu -1 311 1 426 285 42 7 chr17 35419523 35419667 -50018813 + MIR SINE MIR 28 176 -86 356 265 103 8 chr17 35420276 35420393 -50018087 + MIR3 SINE MIR 3 130 -78 182 333 130 0 chr17 35420422 35420491 -50017989 + L3b LINE CR1 1477 1554 -29 527 299 82 16 chr17 35420974 35421168 -50017312 + MIR SINE MIR 5 211 -51 436 276 86 9 chr17 35422230 35422346 -50016134 - L2 LINE L2 0 3313 3189 412 286 97 38 chr17 35426468 35426653 -50011827 - MIR SINE MIR -46 216 21 366 339 62 0 chr17 35427531 35427661 -50010819 - MIR3 SINE MIR -40 168 31 2324 113 3 0 chr17 35427666 35427977 -50010503 - AluSp SINE Alu -1 312 1 2328 115 7 0 chr17 35428028 35428333 -50010147 - AluSx SINE Alu -5 307 1 1959 112 51 4 chr17 35428349 35428625 -50009855 - AluSx SINE Alu -23 289 1 989 121 92 0 chr17 35429929 35430070 -50008410 - FRAM SINE Alu -23 153 1 2168 100 3 51 chr17 35430723 35431034 -50007446 - AluSx SINE Alu -16 296 1 745 228 116 16 chr17 35433591 35433780 -50004700 + MER3 DNA MER1_type 2 209 0 441 244 119 18 chr17 35433789 35433957 -50004523 + MIR SINE MIR 50 234 -28 1896 148 0 30 chr17 35435156 35435460 -50003020 - AluSx SINE Alu -17 295 1 1693 163 17 17 chr17 35435856 35436017 -50002463 - AluJo SINE Alu -15 297 134 2529 53 0 10 chr17 35436017 35436350 -50002130 - AluY SINE Alu 0 311 1 1693 163 17 17 chr17 35436350 35436476 -50002004 - AluJo SINE Alu -177 135 10 2238 104 21 0 chr17 35437892 35438181 -50000299 + AluSg SINE Alu 2 296 -14 195 244 44 0 chr17 35440361 35440406 -49998074 + L2 LINE L2 3221 3267 -5 1169 223 17 4 chr17 35440424 35440662 -49997818 - MIR SINE MIR -1 261 21 2009 146 3 3 chr17 35442385 35442686 -49995794 - AluSx SINE Alu -11 301 1 349 288 59 7 chr17 35443119 35443272 -49995208 + MER103 DNA DNA 3 163 -3 228 315 144 0 chr17 35443543 35443654 -49994826 + MIR SINE MIR 136 262 0 339 324 87 24 chr17 35444254 35444461 -49994019 + MIR SINE MIR 8 227 -35 276 316 168 54 chr17 35445289 35445605 -49992875 - L3 LINE CR1 -95 1482 1131 2046 136 24 3 chr17 35446798 35447093 -49991387 - AluJb SINE Alu -11 301 1 2356 131 12 12 chr17 35447673 35448010 -49990470 + MER1B DNA MER1_type 1 337 0 712 281 63 21 chr17 35449486 35449724 -49988756 + MIR SINE MIR 12 259 -3 460 323 32 60 chr17 35449843 35450060 -49988420 - MIR SINE MIR -50 212 2 234 299 88 44 chr17 35452453 35452590 -49985890 + L2 LINE L2 3128 3270 -2 392 221 39 0 chr17 35452688 35452765 -49985715 + MIR SINE MIR 28 107 -155 353 245 41 48 chr17 35452851 35452998 -49985482 + MIR SINE MIR 111 256 -6 593 306 91 24 chr17 35453401 35453610 -49984870 - MIR SINE MIR -17 245 23 198 196 75 84 chr17 35453701 35453808 -49984672 - MIR SINE MIR -78 130 25 2239 93 17 0 chr17 35454123 35454414 -49984066 - AluSq SINE Alu -11 302 7 293 313 61 43 chr17 35454419 35454582 -49983898 - MIR SINE MIR -96 166 1 243 276 149 35 chr17 35454654 35454828 -49983652 + L2 LINE L2 3120 3313 0 2384 93 3 0 chr17 35454862 35455164 -49983316 + AluSp SINE Alu 1 303 -10 2262 114 0 0 chr17 35455170 35455467 -49983013 + AluSq SINE Alu 1 297 -16 1939 148 3 30 chr17 35455472 35455775 -49982705 + AluJb SINE Alu 1 295 -17 264 291 29 29 chr17 35456119 35456222 -49982258 - MIR3 SINE MIR -25 183 81 1217 137 0 26 chr17 35456760 35456930 -49981550 - AluSg/x SINE Alu -10 302 136 1493 75 16 0 chr17 35456930 35457118 -49981362 - AluY SINE Alu -2 309 119 1217 137 0 26 chr17 35457118 35457137 -49981343 - AluSg/x SINE Alu -176 136 118 6321 27 0 0 chr17 35457137 35457887 -49980593 - L1PA3 LINE L1 -27 6128 5379 541 93 13 0 chr17 35457888 35457963 -49980517 - AluY SINE Alu -179 132 57 1322 152 0 0 chr17 35457963 35458154 -49980326 - AluSx SINE Alu -121 191 1 329 314 22 36 chr17 35458199 35458336 -49980144 + MIR SINE MIR 1 135 -127 2428 79 0 0 chr17 35458536 35458826 -49979654 - AluSx SINE Alu -22 290 1 233 392 0 10 chr17 35458904 35459001 -49979479 - L2 LINE L2 -70 3202 3107 2565 58 0 0 chr17 35459233 35459541 -49978939 + AluY SINE Alu 1 308 -3 342 339 155 35 chr17 35459755 35460524 -49977956 - L2 LINE L2 -724 2590 1730 2157 122 3 0 chr17 35460666 35460985 -49977495 + AluSq SINE Alu 1 313 0 1660 184 19 26 chr17 35461144 35461280 -49977200 + AluJo SINE Alu 1 136 -176 2493 58 0 3 chr17 35461280 35461606 -49976874 + AluY SINE Alu 1 325 0 1660 184 19 26 chr17 35461606 35461778 -49976702 + AluJo SINE Alu 136 308 -4 2130 128 10 0 chr17 35461948 35462244 -49976236 - AluSx SINE Alu -12 300 2 2371 88 0 7 chr17 35462547 35462844 -49975636 + AluSc SINE Alu 1 295 -14 328 277 0 32 chr17 35463041 35463127 -49975353 - L1MC4 LINE L1 -1350 6692 6608 2179 122 7 0 chr17 35463127 35463421 -49975059 - AluSq SINE Alu -17 296 1 677 262 76 19 chr17 35464955 35465165 -49973315 - MIR SINE MIR -20 242 21 228 275 0 0 chr17 35465239 35465308 -49973172 + L2 LINE L2 1636 1704 -1610 1882 218 134 48 chr17 35465313 35465428 -49973052 + L1ME3A LINE L1 5404 5508 -662 2369 98 7 3 chr17 35465428 35465734 -49972746 + AluSx SINE Alu 4 310 -2 1882 218 134 48 chr17 35465734 35466320 -49972160 + L1ME3A LINE L1 5508 6165 -5 1901 131 14 14 chr17 35466335 35466626 -49971854 - AluJb SINE Alu -21 291 1 2360 97 0 0 chr17 35466637 35466937 -49971543 - AluSc SINE Alu -9 300 1 874 245 142 24 chr17 35466999 35467103 -49971377 + L2 LINE L2 1697 1787 -1527 2232 107 10 0 chr17 35467103 35467394 -49971086 - AluSp SINE Alu -19 294 1 874 245 142 24 chr17 35467394 35467713 -49970767 + L2 LINE L2 1787 2170 -1144 2422 95 0 9 chr17 35467739 35468054 -49970426 + AluSx SINE Alu 1 312 0 240 306 18 36 chr17 35468150 35468261 -49970219 + L2 LINE L2 2921 3029 -284 880 144 40 64 chr17 35468261 35468285 -49970195 - FRAM SINE Alu -143 169 146 261 0 0 0 chr17 35468285 35468314 -49970166 + (TG)n Simple_repeat Simple_repeat 1 29 0 880 144 40 64 chr17 35468314 35468462 -49970018 - FRAM SINE Alu -166 146 1 358 274 148 15 chr17 35468482 35468617 -49969863 + L2 LINE L2 3119 3271 -42 212 258 15 15 chr17 35468624 35468690 -49969790 + L2 LINE L2 2619 2684 -630 2198 116 7 0 chr17 35469154 35469455 -49969025 + AluSx SINE Alu 1 303 -9 2341 99 3 10 chr17 35469959 35470273 -49968207 + AluSx SINE Alu 1 312 0 1273 166 96 33 chr17 35471525 35471796 -49966684 - AluJo SINE Alu -24 288 1 1316 121 16 0 chr17 35471855 35472045 -49966435 + AluSg/x SINE Alu 100 292 -18 1130 157 0 0 chr17 35472296 35472455 -49966025 - AluJb SINE Alu -17 295 137 190 211 0 39 chr17 35472545 35472597 -49965883 - L2 LINE L2 -77 3236 3187 2348 112 0 3 chr17 35472649 35472953 -49965527 - AluSx SINE Alu -9 303 1 2157 113 3 7 chr17 35473161 35473461 -49965019 + AluSx SINE Alu 1 299 -13 182 330 45 11 chr17 35474829 35474917 -49963563 + MIR SINE MIR 168 258 -4 210 37 0 0 chr17 35474946 35474973 -49963507 + (TTG)n Simple_repeat Simple_repeat 2 28 0 948 181 6 0 chr17 35475005 35475171 -49963309 - AluJb SINE Alu -9 303 137 2248 123 0 0 chr17 35475171 35475471 -49963009 - AluSx SINE Alu -12 300 1 2396 81 0 0 chr17 35475540 35475825 -49962655 + AluY SINE Alu 1 288 -23 198 0 0 0 chr17 35475825 35475847 -49962633 + (TTAA)n Simple_repeat Simple_repeat 1 22 0 2396 81 0 0 chr17 35475847 35475858 -49962622 + AluY SINE Alu 287 297 -14 201 39 0 0 chr17 35476724 35476750 -49961730 + (CA)n Simple_repeat Simple_repeat 1 26 0 2352 104 0 0 chr17 35477219 35477517 -49960963 + AluSx SINE Alu 1 298 -14 971 147 18 12 chr17 35477520 35477683 -49960797 + AluJb SINE Alu 137 300 -12 681 145 29 65 chr17 35477694 35477803 -49960677 + AluJo/FLAM SINE Alu 1 106 -196 1522 189 15 4 chr17 35477803 35478067 -49960413 - AluJo SINE Alu -34 278 12 681 145 29 65 chr17 35478067 35478095 -49960385 + AluJo/FLAM SINE Alu 106 133 -169 2048 123 40 0 chr17 35478119 35478420 -49960060 + AluSp SINE Alu 1 313 0 391 233 22 11 chr17 35479416 35479506 -49958974 + MIR3 SINE MIR 93 183 -25 208 197 13 66 chr17 35479959 35480035 -49958445 + GA-rich Low_complexity Low_complexity 3 74 0 396 296 88 19 chr17 35480086 35480245 -49958235 - L2 LINE L2 0 3272 3103 366 312 148 20 chr17 35480925 35481127 -49957353 + MIR SINE MIR 1 228 -34 462 218 0 30 chr17 35481809 35481910 -49956570 - U13 snRNA snRNA -2 102 5 232 226 48 0 chr17 35482190 35482252 -49956228 + MIR SINE MIR 81 145 -117 193 271 21 0 chr17 35482277 35482325 -49956155 + L2 LINE L2 3204 3252 -20 2437 71 0 3 chr17 35482340 35482637 -49955843 - AluY SINE Alu -15 296 1 2706 173 34 27 chr17 35482749 35482812 -49955668 + LTR26B LTR ERV1 1 62 -469 2135 100 14 0 chr17 35482812 35483129 -49955351 + AluSq SINE Alu 1 321 0 2706 173 34 27 chr17 35483129 35483591 -49954889 + LTR26B LTR ERV1 62 531 0 2455 86 7 0 chr17 35483795 35484096 -49954384 - AluSp SINE Alu -10 303 1 478 340 56 46 chr17 35484096 35484324 -49954156 + L2 LINE L2 2517 2741 -572 2281 115 0 13 chr17 35484324 35484638 -49953842 - AluSq SINE Alu -3 310 1 478 340 56 46 chr17 35484638 35484890 -49953590 + L2 LINE L2 2741 3001 -312 198 293 0 17 chr17 35484914 35484972 -49953508 + L2 LINE L2 3257 3313 0 307 254 0 0 chr17 35485282 35485345 -49953135 - L2 LINE L2 0 3272 3210 241 245 82 20 chr17 35485715 35485813 -49952667 - MER5B DNA MER1_type -71 107 4 813 246 128 79 chr17 35485880 35485910 -49952570 + MLT1H LTR MaLR 1 28 -521 2399 83 0 0 chr17 35485910 35486200 -49952280 + AluSg SINE Alu 1 290 -20 813 246 128 79 chr17 35486200 35486437 -49952043 + MLT1H LTR MaLR 28 252 -297 2394 93 7 0 chr17 35486437 35486738 -49951742 - AluSx SINE Alu -9 303 1 813 246 128 79 chr17 35486738 35487004 -49951476 + MLT1H LTR MaLR 252 549 0 564 308 49 26 chr17 35487008 35487313 -49951167 - L3b LINE CR1 -143 1440 1129 1103 195 4 22 chr17 35488891 35489108 -49949372 - AluSg/x SINE Alu -25 287 73 2264 100 10 0 chr17 35489108 35489399 -49949081 - AluSx SINE Alu -18 294 1 2203 102 3 3 chr17 35489542 35489836 -49948644 + AluSc SINE Alu 1 294 -15 286 277 181 30 chr17 35489999 35490165 -49948315 - L2 LINE L2 -195 3077 2887 2415 99 3 0 chr17 35490593 35490905 -49947575 + AluSp SINE Alu 1 313 0 2400 92 3 9 chr17 35492693 35493008 -49945472 + AluSp SINE Alu 1 313 0 1085 152 11 0 chr17 35493391 35493569 -49944911 + AluSg/x SINE Alu 128 307 -3 256 251 5 163 chr17 35494421 35494536 -49943944 - MER5A DNA MER1_type -12 177 46 2296 120 0 3 chr17 35494536 35494837 -49943643 - AluSx SINE Alu -12 300 1 256 251 5 163 chr17 35494837 35494876 -49943604 - MER5A DNA MER1_type -143 46 59 2348 81 13 7 chr17 35494876 35495174 -49943306 - AluSx SINE Alu -12 300 1 256 251 5 163 chr17 35495174 35495221 -49943259 - MER5A DNA MER1_type -129 60 7 230 204 0 19 chr17 35497407 35497461 -49941019 + (TA)n Simple_repeat Simple_repeat 1 53 0 1694 177 7 0 chr17 35497592 35497875 -49940605 - AluJb SINE Alu -13 299 15 1999 164 26 72 chr17 35498301 35498334 -49940146 + L1MD1 LINE L1 5452 5485 -874 2086 141 0 3 chr17 35498334 35498639 -49939841 + AluSx SINE Alu 1 304 -8 1999 164 26 72 chr17 35498639 35498755 -49939725 + L1MD1 LINE L1 5485 5605 -754 2039 124 3 13 chr17 35498755 35499053 -49939427 + AluSx SINE Alu 1 295 -17 1999 164 26 72 chr17 35499053 35499359 -49939121 + L1MD1 LINE L1 5605 5887 -472 348 130 19 0 chr17 35499359 35499413 -49939067 + FLAM SINE Alu 75 129 -4 2096 144 0 0 chr17 35499418 35499717 -49938763 + AluJb SINE Alu 1 299 -13 958 211 32 113 chr17 35499752 35499986 -49938494 + L1MD1 LINE L1 5879 6072 -170 255 61 0 0 chr17 35499986 35500019 -49938461 + (CA)n Simple_repeat Simple_repeat 2 34 0 958 211 32 113 chr17 35500019 35500163 -49938317 + L1MD1 LINE L1 6072 6226 -16 2383 92 3 0 chr17 35500181 35500475 -49938005 + AluSp SINE Alu 1 295 -18 306 50 0 0 chr17 35501183 35501223 -49937257 + (CA)n Simple_repeat Simple_repeat 1 40 0 461 270 98 0 chr17 35501985 35502148 -49936332 + MIR SINE MIR 81 259 -3 2454 93 0 3 chr17 35503403 35503714 -49934766 - AluSx SINE Alu -2 310 1 398 96 0 0 chr17 35503744 35503796 -49934684 + MER66B LTR ERV1 295 346 -140 2217 96 11 0 chr17 35503819 35504146 -49934334 + AluSp SINE Alu 2 331 0 221 175 38 12 chr17 35504470 35504550 -49933930 + (TTAAA)n Simple_repeat Simple_repeat 3 84 0 471 229 85 25 chr17 35504748 35504994 -49933486 + MER5C DNA MER1_type 1 322 -2 842 41 0 0 chr17 35505180 35505278 -49933202 - MER30 DNA MER1_type -130 100 3 239 293 15 75 chr17 35505294 35505427 -49933053 + MIR SINE MIR 20 144 -64 198 321 28 18 chr17 35505524 35505633 -49932847 + MER5A DNA MER1_type 80 189 0 1804 186 7 3 chr17 35505720 35506021 -49932459 - AluJo SINE Alu -10 302 1 2020 132 0 39 chr17 35506105 35506416 -49932064 + AluSx SINE Alu 1 299 -13 1300 80 0 6 chr17 35506573 35506735 -49931745 - AluSx SINE Alu -143 169 9 599 238 63 68 chr17 35510120 35510326 -49928154 - MIR SINE MIR -11 251 47 2281 129 0 0 chr17 35510918 35511227 -49927253 + AluSx SINE Alu 1 309 -3 225 222 0 0 chr17 35511326 35511371 -49927109 + MER5B DNA MER1_type 1 45 -133 2142 109 17 0 chr17 35511381 35511674 -49926806 + AluSx SINE Alu 6 303 -9 2056 127 14 3 chr17 35511734 35512025 -49926455 + AluSx SINE Alu 2 295 -17 1945 103 0 96 chr17 35512027 35512363 -49926117 + AluSx SINE Alu 1 306 0 25 31 0 0 chr17 35512414 35512446 -49926034 + AT_rich Low_complexity Low_complexity 1 32 0 189 279 44 29 chr17 35512450 35512518 -49925962 + MER5A DNA MER1_type 71 139 -50 2217 110 7 0 chr17 35512848 35513147 -49925333 - AluSq SINE Alu -12 301 1 184 211 39 19 chr17 35513262 35513314 -49925166 + L3b LINE CR1 1200 1252 -331 1605 169 30 17 chr17 35513622 35513917 -49924563 + AluJb SINE Alu 1 299 -13 1724 178 31 0 chr17 35514497 35514783 -49923697 + AluJb SINE Alu 1 295 -17 26 50 0 0 chr17 35516477 35516517 -49921963 + GC_rich Low_complexity Low_complexity 1 40 0 242 247 21 31 chr17 35516700 35516723 -49921757 + C-rich Low_complexity Low_complexity 5 27 -73 189 0 0 0 chr17 35516723 35516744 -49921736 + (CCCGG)n Simple_repeat Simple_repeat 4 24 0 242 247 21 31 chr17 35516744 35516817 -49921663 + C-rich Low_complexity Low_complexity 27 100 0 1744 101 124 4 chr17 35517748 35518005 -49920475 + AluSq SINE Alu 1 288 -25 359 273 167 0 chr17 35518026 35518176 -49920304 - MIR SINE MIR -30 232 58 1658 130 45 41 chr17 35518229 35518521 -49919959 - AluSx SINE Alu -15 297 5 2235 102 30 3 chr17 35518888 35519191 -49919289 + AluSx SINE Alu 1 311 -1 210 293 12 24 chr17 35519823 35519905 -49918575 - MIR SINE MIR -3 259 179 778 205 72 0 chr17 35520333 35520499 -49917981 - MER45A DNA AcHobo 0 178 1 437 278 80 17 chr17 35520562 35520738 -49917742 - MIR SINE MIR -17 245 59 448 273 62 40 chr17 35521040 35521216 -49917264 + L1M4 LINE L1 3997 4176 -1970 511 92 0 0 chr17 35521328 35521393 -49917087 + U6 snRNA snRNA 1 65 -42 24 0 0 0 chr17 35521393 35521417 -49917063 + AT_rich Low_complexity Low_complexity 1 24 0 2205 134 0 0 chr17 35521522 35521821 -49916659 - AluSx SINE Alu -13 299 1 201 288 163 25 chr17 35522110 35522270 -49916210 + MIR SINE MIR 32 213 -49 518 252 29 66 chr17 35522330 35522572 -49915908 + MLT1L LTR MaLR 17 249 -366 2052 114 28 0 chr17 35522620 35522910 -49915570 + AluSx SINE Alu 1 298 -14 2109 102 13 26 chr17 35522927 35523230 -49915250 + AluSq SINE Alu 1 299 -14 953 268 125 8 chr17 35523234 35523603 -49914877 + MER57B LTR ERV1 23 434 0 794 158 0 29 chr17 35523614 35523753 -49914727 - AluJo SINE Alu -176 136 2 324 273 78 23 chr17 35523793 35523921 -49914559 + MLT1L LTR MaLR 316 450 -165 462 96 14 0 chr17 35573921 35573994 -49864486 + MER66B LTR ERV1 413 486 0 610 223 40 0 chr17 35575000 35575148 -49863332 - MIR SINE MIR 0 262 109 247 294 231 14 chr17 35576878 35577021 -49861459 - MIR3 SINE MIR -2 206 33 207 202 75 106 chr17 35577186 35577280 -49861200 - MIR3 SINE MIR -28 180 90 728 305 51 27 chr17 35578309 35578565 -49859915 + MIR SINE MIR 1 262 0 249 333 111 16 chr17 35579161 35579287 -49859193 + MIR SINE MIR 49 186 -76 1821 160 0 19 chr17 35579300 35579607 -49858873 + AluJb SINE Alu 11 311 -1 208 289 10 62 chr17 35579691 35579788 -49858692 - MIR SINE MIR -67 141 56 195 375 0 0 chr17 35580430 35580510 -49857970 + MIR SINE MIR 61 140 -122 190 53 132 0 chr17 35580894 35580932 -49857548 - L2 LINE L2 -348 2965 2923 180 414 145 0 chr17 35581070 35581215 -49857265 + L2 LINE L2 3107 3272 0 21 0 0 0 chr17 35581593 35581614 -49856866 + GC_rich Low_complexity Low_complexity 1 21 0 278 268 14 0 chr17 35581825 35581896 -49856584 - MIR SINE MIR -24 238 167 219 204 0 0 chr17 35582719 35582773 -49855707 + (TG)n Simple_repeat Simple_repeat 2 55 0 318 364 16 16 chr17 35585004 35585133 -49853347 + L2 LINE L2 3138 3266 -6 258 303 151 3 chr17 35585390 35585528 -49852952 - MIR3 SINE MIR -72 136 7 1397 184 14 14 chr17 35587668 35587951 -49850529 + MLT1-int LTR MaLR 329 611 -760 908 195 21 3 chr17 35588078 35588272 -49850208 - MIR SINE MIR -56 206 14 516 265 169 0 chr17 35588273 35588409 -49850071 + MER5A DNA MER1_type 31 189 0 633 301 45 81 chr17 35588771 35589106 -49849374 + L2 LINE L2 2948 3270 -2 195 396 40 7 chr17 35592531 35592680 -49845800 + L2 LINE L2 2896 3049 -223 899 320 153 9 chr17 35593771 35594236 -49844244 - L3 LINE CR1 -65 1512 981 342 0 0 0 chr17 35594627 35594665 -49843815 + (CA)n Simple_repeat Simple_repeat 2 39 0 200 220 231 66 chr17 35594705 35594796 -49843684 + MIR3 SINE MIR 102 207 -1 284 349 9 9 chr17 35594864 35594970 -49843510 - MIR SINE MIR -113 149 44 31 58 0 0 chr17 35595297 35595349 -49843131 + GC_rich Low_complexity Low_complexity 1 52 0 277 307 40 20 chr17 35596314 35596415 -49842065 + MIR SINE MIR 112 214 -48 269 340 0 0 chr17 35596449 35596543 -49841937 - MIR SINE MIR -29 233 140 313 338 23 23 chr17 35596584 35596717 -49841763 - MIR SINE MIR -55 153 21 284 336 38 24 chr17 35597427 35597638 -49840842 + L2 LINE L2 2836 3049 -223 245 279 107 41 chr17 35598394 35598516 -49839964 + MIR SINE MIR 52 181 -81 855 273 53 43 chr17 35599016 35599433 -49839047 + L2 LINE L2 2892 3312 -1 291 278 87 0 chr17 35599413 35599528 -49838952 + L3 LINE CR1 1355 1479 -98 * 181 328 31 16 chr17 35599578 35599642 -49838838 - MIR SINE MIR -66 142 78 276 313 32 0 chr17 35599798 35599898 -49838582 + MIR SINE MIR 44 146 -77 207 0 0 0 chr17 35600293 35600316 -49838164 + (CA)n Simple_repeat Simple_repeat 2 24 0 2344 148 51 5 chr17 35600589 35600962 -49837518 + MLT1B LTR MaLR 1 390 0 182 204 68 23 chr17 35600974 35601018 -49837462 + MIR SINE MIR 103 148 -60 195 328 30 0 chr17 35602375 35602442 -49836038 + MER5B DNA MER1_type 75 143 -35 202 259 17 17 chr17 35602565 35602623 -49835857 + L2 LINE L2 3248 3305 -8 234 0 0 0 chr17 35602627 35602653 -49835827 + (TGAA)n Simple_repeat Simple_repeat 2 27 0 212 210 48 32 chr17 35602861 35602923 -49835557 + L2 LINE L2 3243 3305 -8 216 0 0 0 chr17 35602925 35602949 -49835531 + (TGAA)n Simple_repeat Simple_repeat 4 27 0 287 250 56 62 chr17 35603175 35603319 -49835161 + MIR3 SINE MIR 21 163 -45 1482 234 99 34 chr17 35603404 35603601 -49834879 + L1ME4a LINE L1 5486 5669 -452 1879 141 26 7 chr17 35603601 35603905 -49834575 + AluJo SINE Alu 1 310 -2 1482 234 99 34 chr17 35603905 35604304 -49834176 + L1ME4a LINE L1 5669 6121 0 680 219 101 48 chr17 35604386 35604597 -49833883 + MIR SINE MIR 20 245 -17 303 28 0 0 chr17 35604597 35604633 -49833847 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 680 219 101 48 chr17 35604633 35604649 -49833831 + MIR SINE MIR 245 259 -3 373 306 0 28 chr17 35604835 35604943 -49833537 + MIR SINE MIR 42 146 -62 495 312 98 29 chr17 35605098 35605271 -49833209 + MER91A DNA MER1_type 1 185 -11 619 275 14 55 chr17 35606056 35606274 -49832206 + MIR SINE MIR 51 259 -3 289 323 71 0 chr17 35606437 35606536 -49831944 + L2 LINE L2 3208 3313 0 315 0 0 0 chr17 35606580 35606615 -49831865 + (CA)n Simple_repeat Simple_repeat 2 36 0 272 234 64 21 chr17 35606986 35607080 -49831400 - MIR SINE MIR -86 122 25 206 376 8 8 chr17 35608449 35608582 -49829898 + GA-rich Low_complexity Low_complexity 2 134 0 309 26 0 0 chr17 35608920 35608958 -49829522 + (TG)n Simple_repeat Simple_repeat 2 39 0 198 0 0 0 chr17 35608958 35608980 -49829500 + (GA)n Simple_repeat Simple_repeat 2 23 0 205 379 118 25 chr17 35609161 35609322 -49829158 - MIR SINE MIR -8 254 79 309 301 54 25 chr17 35609479 35609670 -49828810 - MIR SINE MIR -41 221 21 373 247 215 0 chr17 35610101 35610194 -49828286 - MER81 DNA DNA 0 114 2 339 288 63 9 chr17 35610346 35610457 -49828023 + MIR SINE MIR 96 212 -50 403 223 48 10 chr17 35610649 35610752 -49827728 - MIR3 SINE MIR -21 187 81 287 238 12 0 chr17 35610933 35611013 -49827467 + L2 LINE L2 2909 2989 -283 2759 147 33 0 chr17 35611065 35611547 -49826933 + MER41E LTR ERV1 15 512 0 386 367 45 41 chr17 35611574 35611819 -49826661 + L2 LINE L2 3027 3272 0 383 307 114 18 chr17 35611804 35611970 -49826510 - L2 LINE L2 -4 3309 3128 * 2213 252 37 74 chr17 35613848 35614688 -49823792 + MER21B LTR ERV1 1 809 -54 223 311 95 74 chr17 35614744 35614934 -49823546 + L2 LINE L2 3069 3262 -10 * 593 313 78 21 chr17 35614928 35615171 -49823309 + L3 LINE CR1 1314 1570 -7 208 319 0 14 chr17 35615205 35615277 -49823203 + GA-rich Low_complexity Low_complexity 1 71 0 302 283 214 13 chr17 35615555 35615714 -49822766 + MIR3 SINE MIR 3 193 -15 2328 93 0 6 chr17 35615758 35616070 -49822410 - AluSq SINE Alu -3 310 1 303 207 54 34 chr17 35616354 35616483 -49821997 + MLT1H LTR MaLR 369 448 -2 637 300 123 18 chr17 35617114 35617341 -49821139 + MIR SINE MIR 12 262 0 257 327 87 74 chr17 35617572 35617881 -49820599 - L2 LINE L2 -448 2866 2554 443 225 243 40 chr17 35617897 35618070 -49820410 + MIR SINE MIR 30 237 -25 243 239 0 45 chr17 35618743 35618810 -49819670 + MIR3 SINE MIR 118 181 -27 275 337 0 11 chr17 35619677 35619772 -49818708 - MIR3 SINE MIR -17 191 98 180 215 224 47 chr17 35620133 35620240 -49818240 + MIR SINE MIR 20 145 -63 333 0 0 0 chr17 35621669 35621706 -49816774 + (CA)n Simple_repeat Simple_repeat 1 37 0 220 175 0 0 chr17 35621894 35621934 -49816546 - L2 LINE L2 -4 3309 3270 259 288 25 0 chr17 35622203 35622283 -49816197 - MER5A DNA MER1_type -36 153 72 302 269 192 0 chr17 35622344 35622448 -49816032 + MER5B DNA MER1_type 2 125 -53 208 93 0 47 chr17 35622448 35622491 -49815989 + (TAAAAA)n Simple_repeat Simple_repeat 2 42 0 219 97 0 0 chr17 35622495 35622526 -49815954 + MER5B DNA MER1_type 148 178 0 424 256 31 75 chr17 35624119 35624279 -49814201 - MIR3 SINE MIR -26 182 30 258 158 0 88 chr17 35624614 35624671 -49813809 + L2 LINE L2 3221 3272 0 222 118 0 0 chr17 35625245 35625279 -49813201 + (T)n Simple_repeat Simple_repeat 1 34 0 345 292 97 0 chr17 35625720 35625864 -49812616 + MIR SINE MIR 47 204 -58 213 39 0 0 chr17 35626060 35626086 -49812394 + (TG)n Simple_repeat Simple_repeat 1 26 0 282 303 191 25 chr17 35626401 35626563 -49811917 + MIR3 SINE MIR 19 207 -1 337 271 196 7 chr17 35626748 35626951 -49811529 - MIR SINE MIR -14 248 4 208 333 97 0 chr17 35627170 35627242 -49811238 + L2 LINE L2 3173 3251 -21 1345 161 77 42 chr17 35627245 35627531 -49810949 + AluJo SINE Alu 15 310 -2 919 228 5 5 chr17 35627545 35627742 -49810738 - MIR SINE MIR 0 262 66 714 233 204 35 chr17 35627878 35628393 -49810087 - L2 LINE L2 0 3313 2685 738 202 17 34 chr17 35628674 35628852 -49809628 + MER33 DNA MER1_type 1 175 -149 771 165 30 15 chr17 35628874 35629007 -49809473 - AluJb SINE Alu -176 136 2 707 192 32 0 chr17 35629009 35629165 -49809315 + MER33 DNA MER1_type 164 324 0 249 319 133 24 chr17 35629384 35629550 -49808930 - MIR SINE MIR -1 261 78 189 333 22 11 chr17 35630235 35630325 -49808155 - MIR SINE MIR -111 151 61 1446 199 3 30 chr17 35630524 35630825 -49807655 + AluJo SINE Alu 3 295 -17 194 308 192 0 chr17 35631052 35631130 -49807350 - MIR SINE MIR -122 140 48 219 281 0 62 chr17 35631879 35631943 -49806537 + L2 LINE L2 3204 3263 -9 575 218 54 172 chr17 35632809 35633099 -49805381 + L2 LINE L2 2851 3055 -258 2008 103 0 40 chr17 35633099 35633400 -49805080 + AluSx SINE Alu 21 309 -3 575 218 54 172 chr17 35633400 35633627 -49804853 + L2 LINE L2 3055 3307 -6 391 361 79 34 chr17 35633667 35634074 -49804406 - L2 LINE L2 0 3272 2848 246 298 88 0 chr17 35635134 35635248 -49803232 + L3b LINE CR1 1263 1386 -197 189 0 0 0 chr17 35635830 35635851 -49802629 + (CA)n Simple_repeat Simple_repeat 2 22 0 426 331 38 0 chr17 35636060 35636217 -49802263 - MIR3 SINE MIR -10 198 36 204 235 104 52 chr17 35636512 35636627 -49801853 + MIR3 SINE MIR 47 167 -41 190 188 0 0 chr17 35637508 35637540 -49800940 - L2 LINE L2 -20 3252 3221 361 355 102 5 chr17 35637756 35638067 -49800413 - L2 LINE L2 -213 3059 2715 241 265 15 0 chr17 35638389 35638457 -49800023 - MIR SINE MIR -111 97 29 25 31 0 0 chr17 35640353 35640385 -49798095 + GC_rich Low_complexity Low_complexity 1 32 0 26 50 0 0 chr17 35640537 35640577 -49797903 + GC_rich Low_complexity Low_complexity 1 40 0 21 0 0 0 chr17 35641019 35641040 -49797440 + GC_rich Low_complexity Low_complexity 1 21 0 309 308 0 0 chr17 35644539 35644617 -49793863 - L2 LINE L2 -56 3257 3180 269 315 11 0 chr17 35645626 35645715 -49792765 - MIR3 SINE MIR -2 206 117 814 294 16 16 chr17 35645887 35646132 -49792348 - MIR SINE MIR -2 260 16 1707 211 5 19 chr17 35646648 35647022 -49791458 - MLT1B LTR MaLR 0 390 22 303 267 19 57 chr17 35647027 35647060 -49791420 + MER94 DNA DNA 34 67 -67 1019 54 78 0 chr17 35647060 35647189 -49791291 + MER85 DNA T2_type 1 139 0 303 267 19 57 chr17 35647189 35647260 -49791220 + MER94 DNA DNA 67 134 0 325 372 51 20 chr17 35647262 35647458 -49791022 + MIR SINE MIR 58 259 -3 1146 299 71 47 chr17 35647468 35647991 -49790489 + L2 LINE L2 2773 3309 -4 391 248 0 28 chr17 35648730 35648839 -49789641 - MIR3 SINE MIR -52 156 51 217 353 126 0 chr17 35649203 35649322 -49789158 + L2 LINE L2 3180 3313 0 * 405 305 64 108 chr17 35649321 35649773 -49788707 - L2 LINE L2 -21 3251 2820 247 180 22 67 chr17 35650324 35650413 -49788067 + (CAGAGA)n Simple_repeat Simple_repeat 3 87 0 359 301 77 13 chr17 35650756 35650912 -49787568 - MIR3 SINE MIR -10 198 33 212 389 22 54 chr17 35651237 35651317 -49787163 + L2 LINE L2 3135 3216 -97 2438 128 59 20 chr17 35651317 35651725 -49786755 + MSTB LTR MaLR 1 424 -2 212 389 22 54 chr17 35651725 35651829 -49786651 + L2 LINE L2 3216 3313 0 438 291 34 39 chr17 35651896 35652075 -49786405 - MIR SINE MIR -70 192 15 863 242 142 5 chr17 35652368 35652587 -49785893 + MIR SINE MIR 14 262 0 365 280 177 34 chr17 35653312 35653487 -49784993 - MIR SINE MIR -32 230 31 479 244 0 17 chr17 35655432 35655612 -49782868 + (CACCAT)n Simple_repeat Simple_repeat 4 180 0 361 310 9 0 chr17 35655617 35655730 -49782750 + (CAT)n Simple_repeat Simple_repeat 3 116 0 365 276 0 6 chr17 35655746 35655920 -49782560 + (CAT)n Simple_repeat Simple_repeat 1 173 0 377 222 15 54 chr17 35656009 35656120 -49782360 - MIR SINE MIR -9 199 76 350 358 40 0 chr17 35656279 35656430 -49782050 + MIR3 SINE MIR 41 197 -11 251 239 22 56 chr17 35656437 35656617 -49781863 + (CAGAGA)n Simple_repeat Simple_repeat 6 179 0 185 360 79 0 chr17 35657432 35657546 -49780934 + L2 LINE L2 2694 2816 -498 448 349 115 38 chr17 35658012 35658439 -49780041 + L2 LINE L2 2813 3272 0 209 366 40 46 chr17 35658426 35658729 -49779751 - L2 LINE L2 -874 2440 2140 * 456 285 113 14 chr17 35659176 35659397 -49779083 - MIR SINE MIR 0 262 20 769 266 124 35 chr17 35659537 35659909 -49778571 + MLT1I LTR MaLR 1 405 -4 721 279 8 8 chr17 35660244 35660492 -49777988 + MIR SINE MIR 15 261 -1 768 200 0 0 chr17 35660505 35660685 -49777795 + (CAT)n Simple_repeat Simple_repeat 1 180 0 325 264 20 40 chr17 35660710 35660859 -49777621 + MIR SINE MIR 60 203 -59 * 333 276 18 16 chr17 35660823 35661001 -49777479 - MIR SINE MIR -1 261 5 819 103 63 11 chr17 35661004 35661178 -49777302 + Tigger3(Golem) DNA MER2_type 2429 2611 -418 20656 119 18 4 chr17 35661360 35664345 -49774135 - Tigger3(Golem) DNA MER2_type 0 3029 1 492 48 0 0 chr17 35664589 35664652 -49773828 + (TG)n Simple_repeat Simple_repeat 1 63 0 219 36 0 0 chr17 35664651 35664679 -49773801 + (GA)n Simple_repeat Simple_repeat 1 28 0 * 276 281 9 18 chr17 35664713 35664827 -49773653 + (TG)n Simple_repeat Simple_repeat 2 114 0 221 132 0 19 chr17 35665773 35665826 -49772654 + (CAGAGA)n Simple_repeat Simple_repeat 4 55 0 628 217 51 0 chr17 35666459 35666597 -49771883 - MIR SINE MIR -80 182 38 376 313 29 0 chr17 35667292 35667430 -49771050 + MIR SINE MIR 20 159 -51 409 281 65 81 chr17 35667679 35667864 -49770616 + MIR3 SINE MIR 27 208 0 225 94 0 0 chr17 35668570 35668602 -49769878 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 211 302 0 0 chr17 35668604 35668657 -49769823 - L2 LINE L2 -7 3306 3254 347 291 55 24 chr17 35668695 35668860 -49769620 - L2 LINE L2 -166 3106 2937 217 246 35 0 chr17 35668927 35668984 -49769496 - L2 LINE L2 -15 3298 3240 * 428 238 133 0 chr17 35668982 35669087 -49769393 + MIR SINE MIR 117 235 -27 353 332 71 22 chr17 35669447 35669759 -49768721 + L2 LINE L2 2734 3059 -213 252 155 0 20 chr17 35669799 35669849 -49768631 - HsTC2 DNA Tc2 -4 1894 53 243 61 0 0 chr17 35670013 35670046 -49768434 + (CAAT)n Simple_repeat Simple_repeat 1 33 0 1081 256 120 32 chr17 35670057 35670555 -49767925 - L2 LINE L2 -49 3264 2713 249 139 481 0 chr17 35670591 35670670 -49767810 + L2 LINE L2 3153 3269 -3 257 280 139 0 chr17 35671033 35671174 -49767306 - MIR SINE MIR -36 172 10 522 154 11 0 chr17 35671374 35671465 -49767015 + MIR SINE MIR 38 129 -79 697 292 97 89 chr17 35671744 35672370 -49766110 + L2 LINE L2 2580 3211 -61 404 222 101 0 chr17 35672473 35672572 -49765908 - L2 LINE L2 -5 3308 3200 209 160 0 20 chr17 35672801 35672851 -49765629 + CT-rich Low_complexity Low_complexity 2 50 0 354 273 55 67 chr17 35673153 35673238 -49765242 + MIR3 SINE MIR 2 86 -122 1561 196 0 31 chr17 35673238 35673524 -49764956 - AluJo SINE Alu -24 288 12 354 273 55 67 chr17 35673524 35673603 -49764877 + MIR3 SINE MIR 86 164 -44 539 239 18 61 chr17 35673849 35674012 -49764468 + MIR3 SINE MIR 2 157 -51 385 314 27 38 chr17 35674844 35675029 -49763451 - MIR3 SINE MIR -1 207 25 387 297 27 0 chr17 35675471 35675582 -49762898 + MIR3 SINE MIR 9 122 -86 276 209 45 60 chr17 35675792 35675859 -49762621 + MER91C DNA MER1_type 34 99 -41 513 291 19 25 chr17 35676408 35676566 -49761914 + MIR SINE MIR 53 209 -53 311 288 144 15 chr17 35676597 35676729 -49761751 - MIR3 SINE MIR -49 159 11 2559 138 7 2 chr17 35676746 35677160 -49761320 - L1MB3 LINE L1 0 6183 5768 213 279 16 16 chr17 35677377 35677438 -49761042 - MER5A DNA MER1_type 0 189 129 382 222 7 82 chr17 35678181 35678316 -49760164 + L2 LINE L2 2943 3067 -205 185 0 0 39 chr17 35678382 35678408 -49760072 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 358 185 67 0 chr17 35679314 35679403 -49759077 - L1MD3 LINE L1 -1 7994 7726 420 250 0 0 chr17 35680475 35680559 -49757921 - MIR SINE MIR -57 151 68 467 171 45 27 chr17 35681044 35681155 -49757325 - Charlie8 DNA MER1_type -2253 164 52 826 213 98 32 chr17 35681157 35681505 -49756975 + L1MC5 LINE L1 7537 7907 -54 2271 82 0 7 chr17 35681658 35681963 -49756517 + AluSc SINE Alu 1 303 0 1268 199 0 5 chr17 35681983 35682204 -49756276 + MER58A DNA MER1_type 2 221 -3 235 175 0 0 chr17 35682513 35682553 -49755927 + MIR SINE MIR 113 152 -110 358 306 58 8 chr17 35683040 35683161 -49755319 + MIR SINE MIR 130 256 -6 2157 120 0 19 chr17 35683310 35683665 -49754815 - AluSx SINE Alu 0 312 1 1570 175 3 58 chr17 35683665 35683974 -49754506 - AluJo SINE Alu -10 302 11 1195 168 53 5 chr17 35684145 35684353 -49754127 - MER20 DNA MER1_type 0 219 2 321 140 0 0 chr17 35684465 35684522 -49753958 + (ATG)n Simple_repeat Simple_repeat 3 59 0 196 373 49 29 chr17 35684709 35684811 -49753669 - MIR SINE MIR -61 147 60 670 201 191 16 chr17 35684963 35685152 -49753328 - MIR SINE MIR -39 223 2 714 244 120 26 chr17 35685597 35685831 -49752649 + MIR SINE MIR 6 258 -4 231 270 162 27 chr17 35686035 35686146 -49752334 + MLT1K LTR MaLR 209 334 -254 282 324 0 0 chr17 35686299 35686404 -49752076 + MLT1K LTR MaLR 484 588 0 3112 178 28 29 chr17 35687179 35687831 -49750649 + L1MB8 LINE L1 5526 6176 -2 227 275 44 0 chr17 35687846 35687937 -49750543 + HAL1 LINE L1 2413 2507 0 180 0 0 0 chr17 35687967 35687987 -49750493 + (A)n Simple_repeat Simple_repeat 1 20 0 435 316 59 15 chr17 35688007 35688143 -49750337 - MIR SINE MIR -108 154 13 307 243 131 19 chr17 35688603 35688710 -49749770 + MIR SINE MIR 93 211 -51 215 347 65 0 chr17 35688990 35689114 -49749366 + L2 LINE L2 3140 3271 -1 246 204 0 0 chr17 35689115 35689159 -49749321 - MIR3 SINE MIR -14 194 151 290 252 35 80 chr17 35689373 35689505 -49748975 - MIR SINE MIR -63 145 14 248 258 32 0 chr17 35689789 35689851 -49748629 + CT-rich Low_complexity Low_complexity 2 65 0 188 226 32 65 chr17 35689960 35690022 -49748458 - L2 LINE L2 -79 3234 3175 282 337 5 76 chr17 35690520 35690704 -49747776 + L2 LINE L2 3098 3268 -4 381 131 0 0 chr17 35691454 35691515 -49746965 + (GGAA)n Simple_repeat Simple_repeat 4 64 0 552 186 10 0 chr17 35691614 35691711 -49746769 + MER5A DNA MER1_type 9 106 -83 630 264 84 0 chr17 35691928 35692095 -49746385 - MIR SINE MIR -1 261 81 303 387 50 0 chr17 35693222 35693403 -49745077 - MIR SINE MIR 0 262 73 359 215 0 0 chr17 35694035 35694100 -49744380 + MER91 DNA MER1_type 2 66 -74 215 222 0 0 chr17 35694284 35694320 -49744160 + L2 LINE L2 2987 3022 -250 320 254 76 25 chr17 35694493 35694611 -49743869 + L2 LINE L2 3185 3308 -5 516 257 85 52 chr17 35695317 35695554 -49742926 + MIR SINE MIR 8 261 -1 233 224 0 0 chr17 35695828 35695877 -49742603 + MIR SINE MIR 91 139 -123 196 262 24 0 chr17 35696456 35696507 -49741973 - MIR SINE MIR -98 164 113 194 143 0 0 chr17 35697335 35697363 -49741117 + MER5C DNA MER1_type 1 28 -296 287 326 107 55 chr17 35697677 35697987 -49740493 - L2 LINE L2 0 3272 2947 480 35 0 0 chr17 35698057 35698115 -49740365 + (GGAGA)n Simple_repeat Simple_repeat 4 61 0 670 229 279 38 chr17 35698184 35698424 -49740056 - MLT1G LTR MaLR 0 590 298 305 256 244 27 chr17 35698461 35698719 -49739761 + L2 LINE L2 2951 3264 -8 848 273 108 30 chr17 35698887 35699507 -49738973 + L2 LINE L2 2643 3313 0 267 219 268 0 chr17 35700468 35700550 -49737930 - L2 LINE L2 0 3313 3210 227 354 54 14 chr17 35700579 35700726 -49737754 - MIR SINE MIR -7 255 103 357 288 93 7 chr17 35700885 35701024 -49737456 - MIR SINE MIR -13 249 99 487 345 52 0 chr17 35701724 35701898 -49736582 - MIR3 SINE MIR -6 202 20 285 283 35 44 chr17 35701913 35702026 -49736454 + MIR SINE MIR 3 114 -148 404 280 55 48 chr17 35702312 35702485 -49735995 - MIR SINE MIR -48 160 10 288 243 27 94 chr17 35703041 35703216 -49735264 - MIR3 SINE MIR -16 192 28 469 177 2 3 chr17 35703758 35703844 -49734636 + MER5A DNA MER1_type 29 102 -76 366 311 67 8 chr17 35703906 35704040 -49734440 - MIR SINE MIR -36 172 31 519 339 62 15 chr17 35704483 35704743 -49733737 - L3 LINE CR1 -344 1233 962 335 281 46 48 chr17 35704978 35705146 -49733334 - MIR SINE MIR -62 146 31 817 303 26 4 chr17 35705748 35705982 -49732498 + MIR SINE MIR 9 247 -15 414 221 12 0 chr17 35705982 35706068 -49732412 + MIR3 SINE MIR 113 199 -9 388 243 35 38 chr17 35706204 35706368 -49732112 - MIR SINE MIR -46 216 60 656 284 233 6 chr17 35706613 35706944 -49731536 + L3 LINE CR1 981 1386 -191 746 139 64 35 chr17 35708106 35708279 -49730201 + MER53 DNA DNA 9 186 -3 426 282 16 8 chr17 35708526 35708650 -49729830 - MIR3 SINE MIR -69 139 15 470 274 252 23 chr17 35709025 35709331 -49729149 + L3 LINE CR1 1003 1378 -199 281 222 167 14 chr17 35709327 35709399 -49729081 + MIR SINE MIR 42 124 -84 * 214 293 56 153 chr17 35709828 35710169 -49728311 + L2 LINE L2 2915 3222 -50 579 305 151 4 chr17 35710186 35710465 -49728015 + L2 LINE L2 2994 3313 0 1222 281 181 8 chr17 35710514 35710988 -49727492 + MLT1K LTR MaLR 33 588 0 263 220 68 0 chr17 35711026 35711085 -49727395 + L2 LINE L2 3249 3311 -2 587 228 108 42 chr17 35711676 35711917 -49726563 - L1MC5 LINE L1 -36 7925 7669 360 64 0 0 chr17 35712189 35712236 -49726244 + (GA)n Simple_repeat Simple_repeat 2 48 0 400 253 39 65 chr17 35712267 35712421 -49726059 + MLT1G1 LTR MaLR 441 590 -5 1480 208 150 83 chr17 35712438 35713317 -49725163 - L1MC5 LINE L1 -297 7664 6727 210 267 207 22 chr17 35713793 35713928 -49724552 + MIR SINE MIR 43 202 -60 978 93 0 0 chr17 35713958 35714097 -49724383 + (TTTCC)n Simple_repeat Simple_repeat 4 142 0 783 32 0 0 chr17 35714098 35714192 -49724288 + (TTTC)n Simple_repeat Simple_repeat 3 96 0 1871 119 45 4 chr17 35714192 35714461 -49724019 - AluJo SINE Alu -32 280 1 271 265 0 0 chr17 35714793 35714861 -49723619 - MIR SINE MIR 0 262 195 1406 264 40 18 chr17 35714868 35715364 -49723116 + L2 LINE L2 2583 3102 -211 285 288 0 0 chr17 35715374 35715447 -49723033 + L2 LINE L2 3241 3313 0 256 254 101 72 chr17 35715450 35715588 -49722892 - MIR SINE MIR -64 198 57 2617 194 91 52 chr17 35716152 35716929 -49721551 - L1ME1 LINE L1 -20 6146 5339 401 306 41 53 chr17 35717134 35717304 -49721176 - MIR3 SINE MIR -25 183 16 402 263 153 24 chr17 35718586 35718770 -49719710 + MIR SINE MIR 3 208 -54 281 389 42 6 chr17 35719054 35719221 -49719259 - MIR3 SINE MIR -6 202 30 192 158 0 0 chr17 35719593 35719631 -49718849 + (CAG)n Simple_repeat Simple_repeat 2 39 0 582 63 0 0 chr17 35719813 35719892 -49718588 + (TCCA)n Simple_repeat Simple_repeat 1 79 0 683 237 81 15 chr17 35719992 35720190 -49718290 + LTR33 LTR ERVL 1 211 -310 330 276 41 0 chr17 35720418 35720516 -49717964 + MIR SINE MIR 81 182 -80 207 336 45 18 chr17 35720512 35720622 -49717858 - MIR SINE MIR -141 121 9 * 423 245 50 14 chr17 35720993 35721132 -49717348 - MIR SINE MIR -45 217 74 196 325 218 19 chr17 35721269 35721577 -49716903 + L2 LINE L2 1589 1957 -1357 1363 255 72 14 chr17 35721583 35722217 -49716263 - L2 LINE L2 0 3313 2648 288 327 112 52 chr17 35722255 35723248 -49715232 + L2 LINE L2 2005 3104 -168 575 315 52 14 chr17 35723253 35723466 -49715014 - MIR SINE MIR -13 249 29 316 283 145 22 chr17 35723508 35723646 -49714834 + L2 LINE L2 3115 3269 -3 391 240 68 27 chr17 35724591 35724737 -49713743 - MIR3 SINE MIR -11 197 46 345 47 0 0 chr17 35725219 35725262 -49713218 + (TG)n Simple_repeat Simple_repeat 1 43 0 220 278 56 33 chr17 35726210 35726300 -49712180 - L2 LINE L2 -22 3250 3159 300 335 74 17 chr17 35726388 35726564 -49711916 - MIR3 SINE MIR -3 205 20 192 184 20 20 chr17 35726740 35726789 -49711691 - L2 LINE L2 0 3272 3224 777 241 42 51 chr17 35728148 35728384 -49710096 - MIR SINE MIR -1 261 28 197 195 73 0 chr17 35729027 35729068 -49709412 - L2 LINE L2 -19 3253 3210 422 231 19 81 chr17 35729436 35729596 -49708884 + MIR3 SINE MIR 5 154 -54 583 221 93 47 chr17 35729701 35729873 -49708607 + MIR SINE MIR 63 242 -20 186 103 0 0 chr17 35729906 35729935 -49708545 + (TCC)n Simple_repeat Simple_repeat 2 30 0 209 305 0 17 chr17 35730400 35730459 -49708021 + MIR3 SINE MIR 125 182 -26 520 295 22 0 chr17 35730705 35730844 -49707636 + MIR3 SINE MIR 44 185 -23 195 162 0 0 chr17 35731021 35731058 -49707422 + CT-rich Low_complexity Low_complexity 1 37 0 186 43 0 0 chr17 35731571 35731594 -49706886 + (TAA)n Simple_repeat Simple_repeat 1 23 0 794 245 77 34 chr17 35731595 35731828 -49706652 - MIR SINE MIR -8 254 12 31 0 0 0 chr17 35732212 35732243 -49706237 + AT_rich Low_complexity Low_complexity 1 31 0 184 0 30 61 chr17 35732962 35732995 -49705485 + (TTTTTG)n Simple_repeat Simple_repeat 2 33 0 958 182 13 0 chr17 35734797 35734956 -49703524 + FRAM SINE Alu 3 163 -13 209 226 43 11 chr17 35735020 35735113 -49703367 + (TA)n Simple_repeat Simple_repeat 2 97 0 285 227 192 17 chr17 35735126 35735298 -49703182 - L1M4 LINE L1 -3477 2669 2468 2450 71 0 19 chr17 35735298 35735609 -49702871 - AluY SINE Alu -6 305 1 383 287 110 43 chr17 35735626 35735725 -49702755 - L1M4 LINE L1 -2697 3449 3358 2123 87 4 0 chr17 35735725 35735989 -49702491 - AluSc SINE Alu -6 303 39 383 287 110 43 chr17 35735989 35736098 -49702382 - L1M4 LINE L1 -2788 3358 3227 576 99 0 12 chr17 35736099 35736180 -49702300 - AluSc SINE Alu -13 296 217 234 0 0 0 chr17 35736609 35736635 -49701845 + (CA)n Simple_repeat Simple_repeat 2 27 0 182 154 0 77 chr17 35736635 35736726 -49701754 + (TA)n Simple_repeat Simple_repeat 1 84 0 324 214 48 36 chr17 35736790 35736874 -49701606 - L1MC4 LINE L1 -1339 6703 6619 2275 101 7 0 chr17 35737325 35737623 -49700857 - AluSp SINE Alu -13 300 1 1931 132 15 0 chr17 35737634 35737907 -49700573 - AluSc SINE Alu -14 295 19 2175 135 0 0 chr17 35738063 35738359 -49700121 - AluSx SINE Alu -14 298 3 1830 168 25 0 chr17 35739046 35739331 -49699149 + AluJb SINE Alu 1 292 -20 524 261 149 63 chr17 35739950 35740172 -49698308 + MIR SINE MIR 3 243 -19 2429 97 3 0 chr17 35741070 35741379 -49697101 + AluSg SINE Alu 1 310 0 713 216 25 10 chr17 35741381 35741580 -49696900 + LOR1-int LTR ERV1 1839 2040 -6080 966 193 39 43 chr17 35741589 35741822 -49696658 - MER50 LTR ERV1 -1 733 502 2287 112 6 6 chr17 35741855 35742168 -49696312 + AluSq SINE Alu 1 313 0 442 185 47 57 chr17 35742181 35742303 -49696177 + L1P5 LINE L1 5315 5437 -727 1778 96 112 0 chr17 35742303 35742608 -49695872 + AluSg SINE Alu 1 333 0 442 185 47 57 chr17 35742608 35742669 -49695811 + L1P5 LINE L1 5437 5497 -667 474 321 64 0 chr17 35743427 35743614 -49694866 + MIR SINE MIR 46 244 -18 * 615 250 77 12 chr17 35743611 35743779 -49694701 - MIR SINE MIR -49 213 35 394 274 48 43 chr17 35743984 35744119 -49694361 + MIR SINE MIR 30 161 -60 392 241 60 35 chr17 35744116 35744232 -49694248 + MIR SINE MIR 18 136 -126 * 873 216 132 13 chr17 35744289 35744516 -49693964 + MIR SINE MIR 3 256 -6 587 227 45 56 chr17 35745460 35745658 -49692822 + MIR SINE MIR 47 242 -20 3015 159 30 40 chr17 35746449 35746513 -49691967 - L1MB2 LINE L1 0 6171 6108 2025 152 3 3 chr17 35746513 35746822 -49691658 - AluJb SINE Alu -3 309 1 3015 159 30 40 chr17 35746822 35747362 -49691118 - L1MB2 LINE L1 -63 6108 5573 193 297 68 14 chr17 35747777 35747851 -49690629 + MIR3 SINE MIR 115 192 -16 336 260 32 69 chr17 35748539 35748699 -49689781 - MIR SINE MIR -58 150 3 278 252 35 47 chr17 35748780 35748919 -49689561 + MIR SINE MIR 31 162 -89 234 279 156 7 chr17 35749185 35749339 -49689141 - MIR3 SINE MIR -11 197 21 711 304 51 5 chr17 35750566 35750780 -49687700 + MIR SINE MIR 21 244 -18 283 385 47 7 chr17 35750788 35750936 -49687544 + L2 LINE L2 3106 3259 -13 201 74 0 0 chr17 35750936 35750963 -49687517 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 381 310 94 35 chr17 35750969 35751140 -49687340 + L3 LINE CR1 1395 1575 -2 227 308 187 0 chr17 35751294 35751401 -49687079 + L2 LINE L2 3146 3272 0 1860 169 3 0 chr17 35752137 35752527 -49685953 + AluJb SINE Alu 1 391 0 244 351 54 12 chr17 35752542 35752710 -49685770 - MIR3 SINE MIR -11 197 23 585 293 37 16 chr17 35754023 35754386 -49684094 - HAL1 LINE L1 -47 2460 2069 235 174 0 22 chr17 35754443 35754489 -49683991 + MLT1J2 LTR MaLR 67 111 -339 1418 272 127 18 chr17 35754812 35755433 -49683047 - HAL1 LINE L1 -566 1941 1253 327 279 145 88 chr17 35755486 35755769 -49682711 - MLT1H LTR MaLR -13 536 238 853 147 7 0 chr17 35755775 35755911 -49682569 + MER66B LTR ERV1 350 486 0 568 301 86 5 chr17 35755912 35756098 -49682382 + MIR SINE MIR 32 232 -30 210 233 0 0 chr17 35756717 35756760 -49681720 - MIR SINE MIR -61 147 105 546 247 66 18 chr17 35757274 35757440 -49681040 + MIR SINE MIR 89 262 0 429 250 44 106 chr17 35757512 35757692 -49680788 + MER5B DNA MER1_type 4 172 -6 334 290 74 40 chr17 35758025 35758201 -49680279 - MIR3 SINE MIR -22 186 5 269 314 29 39 chr17 35759584 35759686 -49678794 + MIR SINE MIR 41 141 -67 289 224 206 28 chr17 35759970 35760077 -49678403 + L2 LINE L2 3147 3272 0 778 266 148 0 chr17 35760199 35760455 -49678025 - MLT1I LTR MaLR -15 394 101 256 236 69 0 chr17 35760471 35760543 -49677937 - MLT1J2 LTR MaLR -276 174 98 * 374 284 35 21 chr17 35760532 35760673 -49677807 - MLT1I LTR MaLR -261 148 6 232 371 114 0 chr17 35760834 35760939 -49677541 - L2 LINE L2 -17 3255 3139 264 233 0 0 chr17 35761373 35761446 -49677034 + GA-rich Low_complexity Low_complexity 4 76 0 2256 116 55 19 chr17 35761514 35761875 -49676605 + THE1C LTR MaLR 1 374 -1 389 331 90 39 chr17 35762058 35762552 -49675928 + L2 LINE L2 2739 3272 0 228 306 48 0 chr17 35762560 35762622 -49675858 - L3 LINE CR1 -20 1557 1493 846 220 86 0 chr17 35762628 35762814 -49675666 + MER58A DNA MER1_type 1 202 -22 27 0 0 0 chr17 35763103 35763130 -49675350 + AT_rich Low_complexity Low_complexity 1 27 0 183 361 0 0 chr17 35763235 35763296 -49675184 - L3 LINE CR1 -194 1383 1323 236 360 54 18 chr17 35763566 35763677 -49674803 + L3 LINE CR1 345 459 -1118 300 296 151 16 chr17 35763798 35763984 -49674496 - MIR SINE MIR -32 230 20 199 320 160 10 chr17 35764173 35764273 -49674207 + L3 LINE CR1 1083 1197 -380 228 303 89 76 chr17 35765152 35765466 -49673014 - L2 LINE L2 -410 2904 2587 960 215 25 5 chr17 35766486 35766686 -49671794 + MER63A DNA MER1_type 7 210 0 351 299 54 54 chr17 35767319 35767486 -49670994 + MIR3 SINE MIR 1 167 -41 591 195 86 23 chr17 35768369 35768543 -49669937 + L3 LINE CR1 1348 1532 -45 278 222 0 0 chr17 35768583 35768637 -49669843 + MIR SINE MIR 191 244 -18 185 267 22 0 chr17 35768650 35768695 -49669785 + L3 LINE CR1 1510 1555 -22 240 366 56 7 chr17 35770439 35770581 -49667899 + MIR3 SINE MIR 11 159 -49 255 288 12 0 chr17 35770674 35770754 -49667726 - MER103 DNA DNA -75 91 11 181 278 226 9 chr17 35770922 35771037 -49667443 - MIR SINE MIR -21 241 102 241 236 73 0 chr17 35771223 35771278 -49667202 + MIR SINE MIR 9 67 -195 313 250 52 10 chr17 35771750 35771846 -49666634 + MIR SINE MIR 84 183 -79 191 304 176 10 chr17 35773055 35773157 -49665323 + MIR SINE MIR 35 153 -109 340 257 48 38 chr17 35774163 35774268 -49664212 - L2 LINE L2 0 3313 3208 276 211 53 53 chr17 35775187 35775282 -49663198 - MIR SINE MIR -77 131 37 420 351 87 11 chr17 35775969 35776154 -49662326 - MIR SINE MIR -44 218 20 470 288 89 16 chr17 35776323 35776514 -49661966 - MIR SINE MIR -47 215 11 376 339 42 5 chr17 35777439 35777628 -49660852 + L2 LINE L2 2671 2866 -448 342 323 51 71 chr17 35777674 35777968 -49660512 + L2 LINE L2 2931 3218 -54 533 208 149 0 chr17 35777973 35778123 -49660357 + MER5A DNA MER1_type 4 178 -11 208 289 183 10 chr17 35778379 35778483 -49659997 - MIR SINE MIR -89 173 52 265 278 76 62 chr17 35778956 35779100 -49659380 - MIR3 SINE MIR -15 193 48 695 272 10 63 chr17 35779179 35779441 -49659039 - MIR SINE MIR -2 260 11 320 261 32 83 chr17 35780045 35780202 -49658278 + MIR SINE MIR 68 216 -46 1827 270 53 72 chr17 35780365 35781306 -49657174 + L1ME LINE L1 6 794 -5188 275 320 20 61 chr17 35781307 35781454 -49657026 - MIR SINE MIR -111 151 11 1394 250 84 5 chr17 35782335 35782763 -49655717 + L1ME3A LINE L1 5706 6167 -3 220 299 63 5 chr17 35782923 35783037 -49655443 - MIR SINE MIR -61 147 41 304 273 86 50 chr17 35783208 35783347 -49655133 + MIR3 SINE MIR 51 194 -14 228 295 0 64 chr17 35783494 35783572 -49654908 - L2 LINE L2 0 3272 3200 309 322 21 42 chr17 35783675 35783818 -49654662 - L2 LINE L2 -216 3056 2917 384 267 185 15 chr17 35784697 35784832 -49653648 - MER5B DNA MER1_type -19 159 2 425 293 9 9 chr17 35784834 35784950 -49653530 + L2 LINE L2 3149 3264 -8 266 300 59 41 chr17 35785098 35785268 -49653212 - MIR SINE MIR -72 190 18 226 322 51 17 chr17 35785449 35785567 -49652913 + MIR3 SINE MIR 2 123 -85 26 0 0 0 chr17 35786478 35786504 -49651976 + AT_rich Low_complexity Low_complexity 1 26 0 205 279 127 38 chr17 35788164 35788243 -49650237 - MIR3 SINE MIR -32 176 91 521 300 100 38 chr17 35788409 35788649 -49649831 + MIR SINE MIR 1 255 -7 352 347 53 76 chr17 35788678 35788940 -49649540 + L2 LINE L2 2994 3249 -23 248 275 14 14 chr17 35789711 35789780 -49648700 + GA-rich Low_complexity Low_complexity 3 71 0 434 287 61 39 chr17 35789832 35790013 -49648467 + MIR SINE MIR 28 212 -50 278 261 23 11 chr17 35790271 35790359 -49648121 - MIR3 SINE MIR -52 156 68 370 317 46 62 chr17 35790493 35790752 -49647728 + MIR SINE MIR 8 262 0 645 101 0 0 chr17 35791334 35791433 -49647047 + (TCCA)n Simple_repeat Simple_repeat 4 102 0 198 339 92 73 chr17 35791464 35791682 -49646798 - L2 LINE L2 -50 3222 3001 264 30 0 0 chr17 35792174 35792207 -49646273 + (TG)n Simple_repeat Simple_repeat 1 33 0 239 0 32 0 chr17 35792206 35792237 -49646243 + (GA)n Simple_repeat Simple_repeat 1 32 0 * 2562 70 0 0 chr17 35793072 35793374 -49645106 + AluY SINE Alu 6 307 -4 260 325 60 20 chr17 35793590 35793741 -49644739 - MIR SINE MIR -22 240 84 286 234 142 2 chr17 35794281 35794403 -49644077 - MIR SINE MIR -65 143 45 381 274 150 16 chr17 35794844 35795084 -49643396 + L2 LINE L2 2747 3018 -254 298 284 34 11 chr17 35795285 35795373 -49643107 + MIR SINE MIR 104 193 -69 198 302 63 40 chr17 35795518 35795644 -49642836 + MIR SINE MIR 46 174 -88 428 264 32 45 chr17 35796248 35796403 -49642077 + MIR SINE MIR 63 215 -47 726 273 16 5 chr17 35796440 35796634 -49641846 + MIR SINE MIR 7 202 -60 250 287 49 25 chr17 35797066 35797188 -49641292 + LTR67 LTR ERVL 428 552 -5 504 333 52 0 chr17 35797256 35797430 -49641050 + MIR SINE MIR 65 247 -15 351 248 17 44 chr17 35797684 35797874 -49640606 + GA-rich Low_complexity Low_complexity 1 184 0 238 316 105 18 chr17 35798159 35798273 -49640207 + MIR SINE MIR 47 170 -92 373 16 95 31 chr17 35799746 35799810 -49638670 + L1PA8 LINE L1 6081 6147 -7 1443 165 34 79 chr17 35800327 35800390 -49638090 - MLT1A1 LTR MaLR 0 365 301 2006 105 3 34 chr17 35800390 35800715 -49637765 + AluSq SINE Alu 1 316 0 1443 165 34 79 chr17 35800715 35801031 -49637449 - MLT1A1 LTR MaLR -64 301 2 2186 73 0 0 chr17 35801463 35801723 -49636757 - AluY SINE Alu -51 260 1 1088 203 58 120 chr17 35801936 35802335 -49636145 - MLT1A2 LTR MaLR 0 374 1 1898 285 92 47 chr17 35802623 35803693 -49634787 + L2 LINE L2 2195 3313 0 3197 197 40 36 chr17 35803693 35804447 -49634033 + L1MB7 LINE L1 5376 6135 -49 2348 94 0 19 chr17 35804447 35804756 -49633724 + AluY SINE Alu 1 303 -8 3197 197 40 36 chr17 35804756 35804804 -49633676 + L1MB7 LINE L1 6135 6181 -3 225 0 0 0 chr17 35805080 35805105 -49633375 + (GGGA)n Simple_repeat Simple_repeat 2 26 0 502 298 42 47 chr17 35805671 35805886 -49632594 - MIR SINE MIR -18 244 31 289 200 0 125 chr17 35806654 35806734 -49631746 + MLT1I LTR MaLR 70 135 -274 244 309 144 39 chr17 35807191 35807372 -49631108 - L2 LINE L2 -177 3095 2896 23 0 0 0 chr17 35807468 35807491 -49630989 + AT_rich Low_complexity Low_complexity 1 23 0 201 260 0 41 chr17 35808993 35809066 -49629414 + CT-rich Low_complexity Low_complexity 4 73 0 1382 48 0 0 chr17 35809306 35809473 -49629007 - L1PA4 LINE L1 -5 6150 5984 2495 14 0 0 chr17 35809473 35809764 -49628716 + L1PA4 LINE L1 5683 5973 -182 886 268 71 4 chr17 35810168 35810405 -49628075 - MIR SINE MIR -1 261 9 223 342 53 18 chr17 35810405 35810519 -49627961 - MER5A DNA MER1_type 0 189 72 517 298 53 27 chr17 35810893 35811081 -49627399 + MIR SINE MIR 70 262 0 * 1012 291 4 0 chr17 35811038 35811279 -49627201 - MIR SINE MIR -5 257 16 471 257 117 40 chr17 35811469 35811691 -49626789 - L2 LINE L2 0 3313 3075 2530 224 86 40 chr17 35811703 35812545 -49625935 - L2 LINE L2 -361 2953 2074 369 277 107 124 chr17 35812732 35812867 -49625613 - L2 LINE L2 0 3272 3136 963 159 87 48 chr17 35812867 35813074 -49625406 + MER20 DNA MER1_type 1 215 -4 369 277 107 124 chr17 35813074 35813350 -49625130 - L2 LINE L2 -136 3136 2868 491 285 38 0 chr17 35813779 35813937 -49624543 + MIR3 SINE MIR 38 201 -7 303 314 29 20 chr17 35814656 35814758 -49623722 - MIR3 SINE MIR -47 161 59 449 281 38 25 chr17 35814888 35815277 -49623203 - L1ME4a LINE L1 -30 6091 5650 612 301 98 59 chr17 35815538 35816097 -49622383 - MLT1K LTR MaLR -3 585 5 723 235 37 123 chr17 35816802 35817190 -49621290 - MLT1J1 LTR MaLR -6 440 99 2315 105 0 0 chr17 35817190 35817485 -49620995 + AluSx SINE Alu 1 295 -17 723 235 37 123 chr17 35817485 35817577 -49620903 - MLT1J1 LTR MaLR -347 99 1 432 67 0 0 chr17 35819382 35819442 -49619038 + (CA)n Simple_repeat Simple_repeat 2 61 0 470 364 85 26 chr17 35819958 35820419 -49618061 - L1ME LINE L1 -355 5807 5320 272 415 0 6 chr17 35821456 35821620 -49616860 + L2 LINE L2 1045 1207 -2107 379 314 109 25 chr17 35821737 35822059 -49616421 + L2 LINE L2 1543 1891 -1423 3118 133 9 11 chr17 35822138 35823377 -49615103 - L1PA13 LINE L1 -11 6152 4842 486 198 30 10 chr17 35823544 35823645 -49614835 + MIR SINE MIR 25 127 -135 224 226 98 43 chr17 35823853 35824017 -49614463 + L2 LINE L2 2447 2619 -695 1781 153 13 7 chr17 35824087 35824388 -49614092 + AluJo SINE Alu 2 304 -8 288 296 187 60 chr17 35824448 35824796 -49613684 + L2 LINE L2 2872 3263 -9 211 312 9 55 chr17 35825040 35825149 -49613331 - L2 LINE L2 -208 3064 2961 201 74 0 0 chr17 35825541 35825568 -49612912 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2608 19 7 3 chr17 35825757 35826067 -49612413 - AluY SINE Alu 0 311 1 263 255 147 52 chr17 35826099 35826425 -49612055 + L1M4 LINE L1 2805 3161 -2985 362 284 14 68 chr17 35826456 35826604 -49611876 - MER5A DNA MER1_type 0 189 50 325 284 0 67 chr17 35826487 35826621 -49611859 + MER5A DNA MER1_type 43 167 -22 * 1815 117 81 0 chr17 35827109 35827382 -49611098 - AluSx SINE Alu -17 295 1 248 262 16 0 chr17 35827430 35827491 -49610989 + MLT1K LTR MaLR 527 588 0 1934 138 10 0 chr17 35827697 35827994 -49610486 - AluSx SINE Alu -12 300 1 333 294 49 42 chr17 35828694 35828837 -49609643 + MLT1J1 LTR MaLR 19 162 -284 367 326 44 30 chr17 35829489 35829624 -49608856 - L2 LINE L2 0 3272 3136 392 217 152 0 chr17 35830296 35830388 -49608092 + MIR SINE MIR 79 184 -78 378 270 0 17 chr17 35830388 35830503 -49607977 + (CATATA)n Simple_repeat Simple_repeat 2 114 0 242 289 67 0 chr17 35830503 35830593 -49607887 - L1MC4 LINE L1 -1333 6709 6614 219 36 0 0 chr17 35830593 35830621 -49607859 + (TA)n Simple_repeat Simple_repeat 2 29 0 266 281 12 81 chr17 35831260 35831420 -49607060 + MER5A DNA MER1_type 21 169 -20 207 318 12 12 chr17 35831606 35831691 -49606789 - MIR SINE MIR 0 262 178 199 301 106 8 chr17 35831825 35831948 -49606532 - L2 LINE L2 -585 2729 2595 431 285 95 25 chr17 35831967 35832125 -49606355 - MIR SINE MIR -81 181 13 249 250 31 16 chr17 35832408 35832472 -49606008 - L2 LINE L2 0 3313 3249 425 218 64 18 chr17 35832992 35833102 -49605378 + MIR SINE MIR 71 185 -77 434 355 57 26 chr17 35833477 35833742 -49604738 - L1ME4a LINE L1 -125 5996 5724 777 246 148 5 chr17 35834054 35834257 -49604223 - MIR SINE MIR 0 262 31 300 354 57 19 chr17 35834247 35834405 -49604075 + MIR SINE MIR 29 192 -70 * 292 246 0 0 chr17 35835565 35835626 -49602854 - L2 LINE L2 0 3313 3253 580 304 40 40 chr17 35835979 35836226 -49602254 + MIR SINE MIR 11 257 -5 188 200 17 0 chr17 35836610 35836670 -49601810 + GA-rich Low_complexity Low_complexity 1 61 0 2996 237 120 46 chr17 35837691 35838101 -49600379 + L2 LINE L2 1783 2161 -1152 383 169 26 0 chr17 35838101 35838178 -49600302 - MER116 DNA Mariner -1 79 1 2996 237 120 46 chr17 35838178 35838923 -49599557 + L2 LINE L2 2161 3024 -289 2041 124 0 10 chr17 35838923 35839222 -49599258 + AluSx SINE Alu 1 296 -16 2996 237 120 46 chr17 35839222 35839290 -49599190 + L2 LINE L2 3024 3086 -227 397 260 147 54 chr17 35839611 35839869 -49598611 - L2 LINE L2 -32 3281 3000 353 295 39 32 chr17 35839903 35840059 -49598421 + MLT1K LTR MaLR 188 344 -244 336 24 0 0 chr17 35840778 35840819 -49597661 + (CA)n Simple_repeat Simple_repeat 2 42 0 363 325 49 20 chr17 35840842 35841045 -49597435 - L1MC4a LINE L1 -1889 5919 5711 1000 231 168 40 chr17 35841502 35841931 -49596549 + MLT1J LTR MaLR 28 511 0 560 285 20 20 chr17 35842053 35842204 -49596276 + MIR3 SINE MIR 37 187 -21 193 323 129 32 chr17 35842323 35842478 -49596002 + L2 LINE L2 3101 3270 -2 219 390 122 5 chr17 35842650 35842855 -49595625 + MIR SINE MIR 20 248 -14 379 319 68 18 chr17 35843429 35843592 -49594888 + MIR SINE MIR 34 204 -58 351 327 55 0 chr17 35843630 35843740 -49594740 - MIR SINE MIR -73 189 74 1776 139 17 0 chr17 35844597 35844891 -49593589 - AluSx SINE Alu 0 312 14 1367 196 8 4 chr17 35844901 35845188 -49593292 - AluJo SINE Alu 0 309 22 392 316 22 7 chr17 35845207 35845343 -49593137 - MIR3 SINE MIR -62 146 9 331 224 113 33 chr17 35845463 35845596 -49592884 - MIR SINE MIR -67 195 47 525 261 149 63 chr17 35846419 35846641 -49591839 - MIR SINE MIR -19 243 3 1308 212 51 0 chr17 35847996 35848288 -49590192 + AluJo SINE Alu 1 307 -5 297 51 0 0 chr17 35848297 35848336 -49590144 + (GGAA)n Simple_repeat Simple_repeat 3 41 0 262 293 35 26 chr17 35849025 35849141 -49589339 + L1MC/D LINE L1 5607 5723 -2085 674 175 140 35 chr17 35849997 35850168 -49588312 - MER5A DNA MER1_type 0 189 1 357 93 0 0 chr17 35850394 35850448 -49588032 + (GA)n Simple_repeat Simple_repeat 1 54 0 444 266 141 21 chr17 35850847 35851039 -49587441 + MIR SINE MIR 14 228 -34 2008 97 38 0 chr17 35851096 35851385 -49587095 + AluSq SINE Alu 1 300 -13 391 239 87 27 chr17 35851584 35851768 -49586712 + L1 LINE L1 4881 5075 -1071 2099 58 38 45 chr17 35851778 35852125 -49586355 - L1PA8 LINE L1 0 6172 5861 198 150 0 0 chr17 35854638 35854678 -49583802 + (T)n Simple_repeat Simple_repeat 1 40 0 534 238 27 131 chr17 35855204 35855283 -49583197 + MLT1I LTR MaLR 62 148 -261 2343 64 7 0 chr17 35855283 35855579 -49582901 + AluY SINE Alu 1 298 -13 534 238 27 131 chr17 35855579 35855873 -49582607 + MLT1I LTR MaLR 148 396 -13 418 238 70 87 chr17 35856823 35857167 -49581313 + L1ME3 LINE L1 5619 5956 -214 472 312 14 14 chr17 35857400 35857538 -49580942 - MIR3 SINE MIR -6 202 65 532 308 106 62 chr17 35857620 35857900 -49580580 + L2 LINE L2 2469 2770 -544 1978 137 3 10 chr17 35857900 35858213 -49580267 - AluSx SINE Alu 0 312 2 532 308 106 62 chr17 35858213 35858289 -49580191 + L2 LINE L2 2770 2841 -473 374 302 47 0 chr17 35858290 35858419 -49580061 + LTR16C LTR ERVL 324 458 -33 369 321 236 20 chr17 35858460 35858765 -49579715 + L2 LINE L2 2943 3313 0 197 293 91 10 chr17 35859519 35859618 -49578862 + MIR SINE MIR 82 188 -74 822 280 73 5 chr17 35860606 35860824 -49577656 + MIR SINE MIR 28 260 -2 521 303 92 3 chr17 35860849 35861153 -49577327 - L2 LINE L2 -1184 2130 1800 384 252 27 27 chr17 35862050 35862161 -49576319 + MER45A DNA AcHobo 68 178 0 373 288 82 22 chr17 35862416 35862600 -49575880 - MIR SINE MIR -29 233 39 311 308 83 26 chr17 35863196 35863352 -49575128 + MIR3 SINE MIR 21 185 -23 405 273 149 0 chr17 35864069 35864190 -49574290 - MIR3 SINE MIR -48 160 22 653 222 155 26 chr17 35864533 35864727 -49573753 - MIR SINE MIR -31 231 13 252 0 0 0 chr17 35864810 35864838 -49573642 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 187 206 0 0 chr17 35865315 35865349 -49573131 - L2 LINE L2 -339 2975 2942 267 210 173 12 chr17 35866096 35866177 -49572303 + L2 LINE L2 3214 3307 -6 832 65 0 9 chr17 35866290 35866422 -49572058 - AluSg/x SINE Alu 0 309 179 228 256 156 22 chr17 35866481 35866571 -49571909 - MIR SINE MIR -69 139 38 1332 77 10 3 chr17 35867570 35867770 -49570710 + L1P3 LINE L1 5605 5799 -355 361 113 0 0 chr17 35867744 35867797 -49570683 + L1PA11 LINE L1 6121 6173 -1 * 290 272 168 24 chr17 35867994 35868119 -49570361 + MIR3 SINE MIR 18 160 -48 192 315 105 49 chr17 35868425 35868587 -49569893 - L2 LINE L2 -229 3043 2873 1645 149 40 20 chr17 35869053 35869355 -49569125 + AluJo SINE Alu 1 308 -4 750 101 84 0 chr17 35869361 35869480 -49569000 + FRAM SINE Alu 44 172 -4 256 333 97 0 chr17 35870753 35870867 -49567613 + MIR SINE MIR 60 184 -78 375 290 65 45 chr17 35871248 35871403 -49567077 - MIR3 SINE MIR -14 194 37 197 245 97 110 chr17 35872001 35872156 -49566324 + MIR SINE MIR 20 172 -90 245 294 182 21 chr17 35872189 35872332 -49566148 - MIR SINE MIR -36 226 61 245 135 19 0 chr17 35872388 35872440 -49566040 + (CA)n Simple_repeat Simple_repeat 2 54 0 326 251 147 80 chr17 35873427 35873590 -49564890 - MIR3 SINE MIR -2 206 33 254 262 83 41 chr17 35876335 35876480 -49562000 + MIR3 SINE MIR 36 186 -22 2165 121 0 0 chr17 35876503 35876793 -49561687 + AluSx SINE Alu 1 290 -22 398 258 20 24 chr17 35877396 35877521 -49560959 - MIR SINE MIR -63 145 42 1843 137 0 11 chr17 35878144 35878414 -49560066 + AluSx SINE Alu 43 309 -3 361 315 48 13 chr17 35878457 35878771 -49559709 + L1M4 LINE L1 3342 3666 -2480 1119 121 50 11 chr17 35879147 35879329 -49559151 - L1PA10 LINE L1 -3 6165 5977 3490 130 0 0 chr17 35879331 35879899 -49558581 + L1P LINE L1 4675 5242 -904 358 257 26 9 chr17 35879927 35880040 -49558440 + LTR33 LTR ERVL 403 517 -4 287 226 0 0 chr17 35880193 35880246 -49558234 + MER5A DNA MER1_type 134 186 -3 253 274 53 11 chr17 35880439 35880534 -49557946 - HERV16 LTR ERVL -3810 1186 1088 764 148 0 0 chr17 35880548 35880676 -49557804 - L1MA3 LINE L1 0 6305 6178 3846 171 15 13 chr17 35880680 35882082 -49556398 - L1 LINE L1 -3087 4478 3073 * 10022 166 41 13 chr17 35882078 35883882 -49554598 - L1 LINE L1 -5699 1866 12 449 305 90 11 chr17 35884173 35884350 -49554130 + MIR SINE MIR 33 223 -39 429 218 0 0 chr17 35884348 35884426 -49554054 - MER5A DNA MER1_type -111 78 1 * 392 273 10 0 chr17 35884697 35884796 -49553684 + HERV16 LTR ERVL 1720 1819 -3177 307 248 0 59 chr17 35884800 35884901 -49553579 - MER53 DNA DNA 0 189 95 487 257 53 39 chr17 35884929 35885135 -49553345 + HERV16 LTR ERVL 1882 2090 -3674 511 195 81 16 chr17 35886785 35886908 -49551572 - L1ME3 LINE L1 -159 6003 5873 773 10 42 0 chr17 35886914 35887010 -49551470 - L1PA4 LINE L1 -3 6152 6053 1928 91 12 0 chr17 35887387 35887639 -49550841 + AluSx SINE Alu 1 255 -57 1265 273 75 0 chr17 35887680 35888135 -49550345 - L1ME3 LINE L1 -348 5816 5328 5320 168 27 8 chr17 35888146 35890128 -49548352 - L1PB3 LINE L1 -10 6144 4122 897 267 50 28 chr17 35890124 35890626 -49547854 - L1ME3 LINE L1 -804 5342 4830 * 1357 231 12 80 chr17 35890641 35891130 -49547350 + MLT2B1 LTR ERVL 2 457 -63 198 0 0 0 chr17 35891137 35891159 -49547321 + (TC)n Simple_repeat Simple_repeat 2 23 0 195 114 0 0 chr17 35891159 35891194 -49547286 + (TAGA)n Simple_repeat Simple_repeat 4 38 0 649 268 20 0 chr17 35891303 35891501 -49546979 - L1ME3 LINE L1 -1300 4846 4645 12057 211 25 15 chr17 35891523 35894170 -49544310 + L1PA15 LINE L1 2027 4709 -1456 232 27 54 0 chr17 35894170 35894207 -49544273 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 12057 211 25 15 chr17 35894207 35895292 -49543188 + L1PA15 LINE L1 4709 5783 -382 420 111 0 0 chr17 35895295 35895367 -49543113 + L1PA8 LINE L1 3288 3359 -2787 13228 110 11 7 chr17 35895468 35895525 -49542955 + L1PA8 LINE L1 3341 3396 -2776 2084 129 3 10 chr17 35895525 35895827 -49542653 + AluSq SINE Alu 6 305 -8 13228 110 11 7 chr17 35895827 35898629 -49539851 + L1PA8 LINE L1 3396 6163 -9 2142 193 0 2 chr17 35898638 35899031 -49539449 + L1PA15 LINE L1 5769 6160 -5 1387 210 93 21 chr17 35899038 35899076 -49539404 - L1ME3 LINE L1 -1526 4620 4586 2051 86 15 55 chr17 35899076 35899401 -49539079 - L1PA13 LINE L1 -3 6160 5849 1387 210 93 21 chr17 35899401 35899876 -49538604 - L1ME3 LINE L1 -1560 4586 4070 810 273 54 13 chr17 35900015 35900403 -49538077 + L1ME LINE L1 2607 3010 -3136 2319 82 7 0 chr17 35900407 35900700 -49537780 + AluSq SINE Alu 1 295 -18 819 40 0 0 chr17 35901468 35901567 -49536913 + SVA Other Other 1286 1384 -2 222 62 0 0 chr17 35901806 35901838 -49536642 + (CA)n Simple_repeat Simple_repeat 2 33 0 3083 277 70 43 chr17 35902464 35904866 -49533614 + L1ME LINE L1 2995 5462 -700 2827 52 0 0 chr17 35904866 35905212 -49533268 - L1PA7 LINE L1 -4 6150 5805 3083 277 70 43 chr17 35905212 35905275 -49533205 + L1ME LINE L1 5462 5522 -640 213 132 0 0 chr17 35905292 35905330 -49533150 + (CA)n Simple_repeat Simple_repeat 1 38 0 3105 211 94 90 chr17 35905378 35906275 -49532205 - L1MC4 LINE L1 -140 7902 6995 2049 139 0 7 chr17 35906275 35906577 -49531903 - AluSx SINE Alu -12 300 1 3105 211 94 90 chr17 35906577 35907117 -49531363 - L1MC4 LINE L1 -1047 6995 6459 9970 121 41 19 chr17 35907433 35909924 -49528556 + L1PBa LINE L1 1321 3863 -2999 358 167 0 0 chr17 35911356 35911422 -49527058 - MLT1A1 LTR MaLR 0 365 300 27 49 0 0 chr17 35911644 35911685 -49526795 + AT_rich Low_complexity Low_complexity 1 41 0 30 69 0 0 chr17 35911970 35912028 -49526452 + AT_rich Low_complexity Low_complexity 1 58 0 1205 192 19 15 chr17 35914374 35914635 -49523845 - L1MC2 LINE L1 -266 6078 5817 1777 162 74 8 chr17 35914659 35915053 -49523427 - L1MB2 LINE L1 -3 6168 5749 * 4049 226 28 19 chr17 35915050 35916239 -49522241 - L1MB2 LINE L1 -1323 4823 3624 466 168 47 9 chr17 35916239 35916346 -49522134 - LTR56 LTR ERV1 -138 307 197 346 341 78 26 chr17 35916410 35916680 -49521800 - L1ME4a LINE L1 -266 5855 5572 400 222 104 52 chr17 35916766 35916978 -49521502 + L1ME3 LINE L1 5937 6159 -3 353 336 32 24 chr17 35917549 35917674 -49520806 + MIR3 SINE MIR 30 155 -53 361 298 54 12 chr17 35917681 35917849 -49520631 + MER117 DNA MER1_type 3 177 -20 258 360 93 7 chr17 35918969 35919108 -49519372 - MIR3 SINE MIR -2 206 56 208 283 40 105 chr17 35919256 35919408 -49519072 + MER5A DNA MER1_type 36 177 -1 407 279 18 9 chr17 35919409 35919520 -49518960 - MIR3 SINE MIR -48 160 49 728 277 45 4 chr17 35920504 35920746 -49517734 - MLT1I LTR MaLR -155 254 3 848 133 0 0 chr17 35921706 35921826 -49516654 - FLAM_C SINE Alu -12 121 2 584 225 27 0 chr17 35922217 35922328 -49516152 - MER81 DNA DNA 0 114 1 204 241 0 0 chr17 35922413 35922471 -49516009 + (TA)n Simple_repeat Simple_repeat 1 58 0 261 297 52 19 chr17 35922472 35922684 -49515796 - L1ME4a LINE L1 -158 5963 5745 34 42 0 0 chr17 35922684 35922732 -49515748 + AT_rich Low_complexity Low_complexity 1 48 0 2000 114 29 4 chr17 35922877 35923158 -49515322 + AluSx SINE Alu 1 288 -24 776 279 54 41 chr17 35923396 35923712 -49514768 + MLT1E2 LTR MaLR 81 400 -226 962 212 32 41 chr17 36124344 36124647 -49313833 - L1MA9 LINE L1 -4 6293 6011 402 271 66 42 chr17 36124712 36124878 -49313602 + L2 LINE L2 3103 3272 -41 297 225 0 0 chr17 36124902 36124991 -49313489 + GA-rich Low_complexity Low_complexity 4 92 0 712 176 0 17 chr17 36124996 36125115 -49313365 + FRAM SINE Alu 40 156 -20 197 322 17 0 chr17 36125143 36125202 -49313278 + L3 LINE CR1 1517 1576 -1 412 286 99 6 chr17 36125602 36125773 -49312707 + MER5A DNA MER1_type 1 187 -2 1843 116 55 41 chr17 36126248 36126540 -49311940 - AluSq SINE Alu -17 296 1 184 160 0 80 chr17 36126761 36126811 -49311669 + MIR SINE MIR 105 150 -58 1937 160 3 0 chr17 36126868 36127162 -49311318 - AluJb SINE Alu -15 297 3 2454 52 0 39 chr17 36127184 36127490 -49310990 - AluY SINE Alu -17 294 1 401 244 126 16 chr17 36127635 36127762 -49310718 + MER5A DNA MER1_type 46 186 -3 1144 144 0 0 chr17 36128533 36128693 -49309787 - FRAM SINE Alu -16 160 1 276 343 21 43 chr17 36130394 36130534 -49307946 - MIR SINE MIR -112 150 14 253 280 213 47 chr17 36130991 36131141 -49307339 - MIR SINE MIR -80 182 8 1059 118 0 0 chr17 36131656 36131791 -49306689 + AluSq/x SINE Alu 1 135 -177 2188 101 4 0 chr17 36131791 36132105 -49306375 + AluSg SINE Alu 1 315 0 2015 144 7 7 chr17 36132298 36132597 -49305883 - AluJo SINE Alu -13 299 1 316 194 0 14 chr17 36132726 36132798 -49305682 - AluS SINE Alu 0 300 230 432 311 59 70 chr17 36132955 36133704 -49304776 + L1MEc LINE L1 237 2410 -937 418 302 89 22 chr17 36133709 36133934 -49304546 + L1MEc LINE L1 2390 2629 -3517 2066 139 7 0 chr17 36134082 36134369 -49304111 + AluSx SINE Alu 7 295 -17 242 302 160 0 chr17 36134369 36134475 -49304005 + MER5A DNA MER1_type 66 188 -1 1715 193 13 0 chr17 36134784 36135084 -49303396 - AluJo SINE Alu -8 304 1 4070 93 22 5 chr17 36135679 36136328 -49302152 - L1PB1 LINE L1 -270 5881 5223 24 0 0 0 chr17 36137646 36137670 -49300810 + AT_rich Low_complexity Low_complexity 1 24 0 783 149 0 0 chr17 36137672 36137786 -49300694 - FRAM SINE Alu -62 114 1 580 225 8 0 chr17 36138780 36138909 -49299571 + Zaphod DNA AcHobo 3877 4006 -25 307 111 0 0 chr17 36139542 36139587 -49298893 - MLT1K LTR MaLR -6 582 538 1409 211 28 7 chr17 36140534 36140819 -49297661 - AluSq SINE Alu -22 291 1 1398 189 7 60 chr17 36140850 36141152 -49297328 - AluSg SINE Alu -24 286 1 216 0 0 0 chr17 36141161 36141185 -49297295 + (TTTTG)n Simple_repeat Simple_repeat 4 27 0 2753 181 61 93 chr17 36141194 36142028 -49296452 + SVA Other Other 62 868 -518 1010 266 12 4 chr17 36142885 36143129 -49295351 + MIR SINE MIR 16 261 -1 267 219 105 48 chr17 36143159 36143247 -49295233 + L2 LINE L2 3138 3234 -38 2404 92 0 0 chr17 36143247 36143550 -49294930 + AluSx SINE Alu 1 303 -9 267 219 105 48 chr17 36143550 36143566 -49294914 + L2 LINE L2 3234 3248 -24 239 266 80 35 chr17 36143696 36143809 -49294671 - MIR3 SINE MIR -52 156 39 1774 122 88 27 chr17 36144619 36144913 -49293567 - AluJb SINE Alu 0 312 1 265 57 0 0 chr17 36145194 36145229 -49293251 + Alu SINE Alu 255 289 -13 2239 104 10 3 chr17 36145824 36146121 -49292359 - AluSx SINE Alu -13 299 1 894 226 94 13 chr17 36146304 36146539 -49291941 - MER87 LTR ERV1 0 541 288 1451 176 44 44 chr17 36146640 36146779 -49291701 - AluJb SINE Alu -40 272 131 2132 126 13 10 chr17 36146779 36147081 -49291399 - AluSx SINE Alu -9 303 1 1451 176 44 44 chr17 36147081 36147213 -49291267 - AluJb SINE Alu -180 132 1 310 185 0 0 chr17 36147215 36147269 -49291211 + MER3 DNA MER1_type 155 208 -1 279 221 29 114 chr17 36147297 36147391 -49291089 - L1MC4a LINE L1 -1893 5915 5835 2361 105 0 0 chr17 36147391 36147687 -49290793 - AluSp SINE Alu -17 296 1 279 221 29 114 chr17 36147687 36147732 -49290748 - L1MC4a LINE L1 -1973 5835 5788 1700 170 14 24 chr17 36148197 36148491 -49289989 + AluJo SINE Alu 1 291 -21 446 0 19 0 chr17 36148625 36148679 -49289801 + (TAAAA)n Simple_repeat Simple_repeat 2 56 0 354 228 24 24 chr17 36148708 36148831 -49289649 - L1ME3A LINE L1 -208 5962 5840 446 146 109 0 chr17 36148857 36148967 -49289513 + Charlie5 DNA MER1_type 2 123 -2489 544 155 58 0 chr17 36148969 36149072 -49289408 + Charlie5 DNA MER1_type 2234 2342 -270 1863 164 3 3 chr17 36149075 36149368 -49289112 - AluJb SINE Alu -9 303 11 21 0 0 0 chr17 36149388 36149409 -49289071 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr17 36149446 36149468 -49289012 + AT_rich Low_complexity Low_complexity 1 22 0 719 132 110 45 chr17 36149481 36149761 -49288719 + Charlie5 DNA MER1_type 2365 2579 -33 447 268 23 42 chr17 36149848 36150045 -49288435 - L1ME3A LINE L1 -348 5836 5645 2191 105 10 7 chr17 36150715 36151020 -49287460 + AluSx SINE Alu 3 308 -4 381 324 118 49 chr17 36151077 36151281 -49287199 + L1MC/D LINE L1 5281 5498 -623 24 0 0 0 chr17 36152081 36152105 -49286375 + AT_rich Low_complexity Low_complexity 1 24 0 1690 185 99 143 chr17 36152417 36152732 -49285748 + LTR8 LTR ERV1 1 329 -362 1884 121 38 0 chr17 36152732 36152997 -49285483 + AluSx SINE Alu 1 275 -37 221 0 35 0 chr17 36153002 36153031 -49285449 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 1690 185 99 143 chr17 36153031 36153058 -49285422 + LTR8 LTR ERV1 333 360 -331 4708 142 16 46 chr17 36153058 36153877 -49284603 - LTR25 LTR ERV1 0 794 1 1690 185 99 143 chr17 36153877 36153900 -49284580 + LTR8 LTR ERV1 360 382 -309 2515 53 7 0 chr17 36153900 36154199 -49284281 + AluY SINE Alu 1 301 -10 1690 185 99 143 chr17 36154199 36154586 -49283894 + LTR8 LTR ERV1 382 691 0 2306 72 10 3 chr17 36155465 36155770 -49282710 - AluSq SINE Alu -6 307 1 646 266 102 13 chr17 36156478 36156714 -49281766 - MIR SINE MIR -7 255 3 2124 151 3 0 chr17 36156906 36157217 -49281263 + AluJb SINE Alu 1 312 0 578 178 68 51 chr17 36157815 36157933 -49280547 - FLAM_A SINE Alu -12 121 2 1495 196 77 0 chr17 36158838 36159123 -49279357 + AluJo SINE Alu 1 307 -5 433 137 53 53 chr17 36159505 36159600 -49278880 + MIR3 SINE MIR 62 156 -52 2402 84 0 3 chr17 36159762 36160059 -49278421 - AluY SINE Alu -15 296 1 436 164 16 131 chr17 36160760 36160830 -49277650 - MIR SINE MIR -1 261 208 2268 93 0 17 chr17 36160830 36161153 -49277327 - AluSx SINE Alu 0 319 2 436 164 16 131 chr17 36161153 36161203 -49277277 - MIR SINE MIR -54 208 154 2299 112 0 0 chr17 36161527 36161822 -49276658 - AluSx SINE Alu -17 295 1 2196 120 3 7 chr17 36161829 36161997 -49276483 - AluSx SINE Alu -13 299 131 378 0 0 0 chr17 36161997 36162039 -49276441 + (TG)n Simple_repeat Simple_repeat 1 42 0 2196 120 3 7 chr17 36162039 36162170 -49276310 - AluSx SINE Alu -181 131 1 900 150 0 0 chr17 36162211 36162344 -49276136 + AluSq/x SINE Alu 1 133 -180 306 182 0 0 chr17 36162589 36162644 -49275836 + Alu SINE Alu 239 293 -7 1969 146 13 0 chr17 36162819 36163120 -49275360 - AluY SINE Alu -6 305 1 2264 95 14 0 chr17 36163122 36163416 -49275064 - AluSq SINE Alu -15 298 1 1577 179 19 4 chr17 36163463 36163725 -49274755 - AluJo SINE Alu -46 266 1 275 218 91 36 chr17 36163731 36163896 -49274584 - L1ME LINE L1 -731 5431 5258 1160 172 0 20 chr17 36163955 36164013 -49274467 - MER20 DNA MER1_type -1 218 160 336 94 0 0 chr17 36164013 36164066 -49274414 + (TG)n Simple_repeat Simple_repeat 2 54 0 1160 172 0 20 chr17 36164066 36164211 -49274269 - MER20 DNA MER1_type -59 160 19 2096 125 10 22 chr17 36164251 36164562 -49273918 + AluSx SINE Alu 5 311 -1 1242 283 75 11 chr17 36164566 36165233 -49273247 - L1ME LINE L1 -1053 5093 4384 2342 91 0 7 chr17 36165246 36165544 -49272936 - AluSx SINE Alu -16 296 1 803 168 0 0 chr17 36165560 36165685 -49272795 - FLAM_C SINE Alu -7 126 2 1626 209 7 13 chr17 36165809 36166116 -49272364 - AluJo SINE Alu -6 306 2 182 150 25 0 chr17 36166153 36166193 -49272287 + (TA)n Simple_repeat Simple_repeat 1 41 0 407 273 56 14 chr17 36166452 36166595 -49271885 + MIR3 SINE MIR 24 172 -36 403 271 52 0 chr17 36166681 36166775 -49271705 - MER81 DNA DNA 0 114 16 4377 136 18 24 chr17 36166775 36166943 -49271537 - LTR39 LTR ERV1 0 783 615 2302 110 7 13 chr17 36166943 36167252 -49271228 - AluSx SINE Alu -5 307 1 4377 136 18 24 chr17 36167252 36167824 -49270656 - LTR39 LTR ERV1 -168 615 48 1377 157 57 90 chr17 36167964 36168263 -49270217 + AluJo SINE Alu 1 289 -23 756 176 8 0 chr17 36168293 36168412 -49270068 + FLAM_C SINE Alu 2 121 -22 213 65 0 0 chr17 36168412 36168443 -49270037 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 395 213 187 65 chr17 36168443 36168598 -49269882 + MER5A DNA MER1_type 15 188 -1 250 170 31 0 chr17 36168628 36168688 -49269792 - MIR SINE MIR -64 144 107 221 260 60 0 chr17 36168696 36168746 -49269734 - L2 LINE L2 0 3272 3220 293 247 41 72 chr17 36168747 36168844 -49269636 - MIR3 SINE MIR -102 106 13 2102 130 0 19 chr17 36169497 36169667 -49268813 - AluSx SINE Alu -11 301 129 243 61 0 0 chr17 36169667 36169700 -49268780 + (TG)n Simple_repeat Simple_repeat 2 34 0 2251 95 3 0 chr17 36169700 36169984 -49268496 - AluSp SINE Alu -28 285 1 2102 130 0 19 chr17 36169984 36170119 -49268361 - AluSx SINE Alu -181 131 1 1989 167 0 0 chr17 36170290 36170595 -49267885 - AluJo SINE Alu -5 307 3 384 263 178 0 chr17 36170866 36170984 -49267496 - MIR SINE MIR -11 251 113 881 165 0 0 chr17 36171003 36171136 -49267344 - AluSq/x SINE Alu -179 133 1 296 132 0 38 chr17 36171136 36171189 -49267291 - AluJo SINE Alu -166 136 86 261 323 47 19 chr17 36171206 36171334 -49267146 + MIR SINE MIR 6 141 -67 1852 169 68 74 chr17 36171479 36171532 -49266948 - L1M3 LINE L1 -740 5440 5388 2025 110 43 3 chr17 36171532 36171814 -49266666 - AluSq SINE Alu -20 293 1 2489 47 0 13 chr17 36171821 36172119 -49266361 - AluY SINE Alu -17 294 1 1852 169 68 74 chr17 36172119 36172334 -49266146 - L1M3 LINE L1 -798 5382 5167 2021 152 0 3 chr17 36172334 36172630 -49265850 - AluJb SINE Alu -17 295 1 1852 169 68 74 chr17 36172630 36172814 -49265666 - L1M3 LINE L1 -1013 5167 4983 2489 84 0 0 chr17 36172814 36173123 -49265357 - AluSg SINE Alu -1 309 1 1852 169 68 74 chr17 36173123 36173355 -49265125 - L1M3 LINE L1 -1197 4983 4769 1420 133 155 47 chr17 36173559 36173851 -49264629 + MSTA LTR MaLR 60 392 -36 2440 97 3 0 chr17 36173851 36174161 -49264319 - AluSq SINE Alu -2 311 1 1420 133 155 47 chr17 36174161 36174190 -49264290 + MSTA LTR MaLR 392 416 -12 708 289 74 11 chr17 36174194 36174583 -49263897 - L1ME3A LINE L1 -311 5859 5449 2393 66 0 3 chr17 36174583 36174884 -49263596 - AluSg SINE Alu -10 300 1 25 31 0 0 chr17 36175054 36175086 -49263394 + AT_rich Low_complexity Low_complexity 1 32 0 863 66 0 0 chr17 36176325 36176431 -49262049 + FLAM_C SINE Alu 6 111 -32 180 77 0 0 chr17 36176584 36176610 -49261870 + (TTCA)n Simple_repeat Simple_repeat 2 27 0 611 303 59 31 chr17 36176613 36176936 -49261544 - L2 LINE L2 -15 3298 2967 459 187 0 0 chr17 36177101 36177176 -49261304 - AluS SINE Alu -236 76 2 1765 147 74 0 chr17 36177177 36177462 -49261018 - AluSx SINE Alu -6 306 1 2294 107 0 10 chr17 36177488 36177798 -49260682 - AluSx SINE Alu -5 307 1 830 239 161 53 chr17 36177912 36178267 -49260213 - L2 LINE L2 -526 2788 2396 815 242 28 11 chr17 36178290 36178305 -49260175 - AluJo/FRAM SINE Alu 0 312 299 2453 87 10 0 chr17 36178305 36178615 -49259865 - AluSp SINE Alu 0 313 1 815 242 28 11 chr17 36178615 36178777 -49259703 - AluJo/FRAM SINE Alu -13 299 132 579 253 214 67 chr17 36178808 36179196 -49259284 - L2 LINE L2 -958 2356 1912 303 162 54 153 chr17 36179719 36179788 -49258692 + MER69A DNA AcHobo 1 57 -2469 2392 95 0 0 chr17 36179788 36180084 -49258396 - AluSx SINE Alu -16 296 1 303 162 54 153 chr17 36180084 36180125 -49258355 + MER69A DNA AcHobo 57 100 -77 1719 166 29 0 chr17 36180441 36180719 -49257761 - AluJo SINE Alu -18 294 9 386 253 74 0 chr17 36180770 36180865 -49257615 + MER5A DNA MER1_type 8 109 -80 951 233 43 0 chr17 36182767 36182977 -49255503 - MIR SINE MIR -31 231 13 2229 81 34 3 chr17 36187518 36187859 -49250621 - AluY SINE Alu 0 350 1 2438 75 0 3 chr17 36189150 36189445 -49249035 + AluSp SINE Alu 1 294 -19 1397 191 4 0 chr17 36189582 36189812 -49248668 - AluJo SINE Alu -81 231 1 2114 133 0 0 chr17 36189832 36190178 -49248302 - AluSq SINE Alu 0 346 1 305 197 138 110 chr17 36190188 36190358 -49248122 + L1ME3A LINE L1 5931 6110 -60 816 196 0 0 chr17 36190358 36190491 -49247989 + FLAM_C SINE Alu 1 133 0 305 197 138 110 chr17 36190491 36190538 -49247942 + L1ME3A LINE L1 6110 6154 -16 366 61 0 0 chr17 36190752 36190801 -49247679 + (TG)n Simple_repeat Simple_repeat 1 49 0 198 0 0 0 chr17 36190801 36190823 -49247657 + (TGG)n Simple_repeat Simple_repeat 3 24 0 286 247 0 62 chr17 36191113 36191194 -49247286 + MIR3 SINE MIR 130 205 -3 754 254 16 5 chr17 36191379 36191568 -49246912 + MER58C DNA MER1_type 15 205 -10 2339 76 34 0 chr17 36191571 36191862 -49246618 + AluSx SINE Alu 3 303 -9 26 74 0 0 chr17 36191976 36192030 -49246450 + AT_rich Low_complexity Low_complexity 1 54 0 581 242 23 0 chr17 36193048 36193176 -49245304 - MER5A DNA MER1_type -22 167 37 1213 166 38 0 chr17 36194273 36194484 -49243996 + MER20 DNA MER1_type 1 219 0 213 282 17 17 chr17 36194901 36194978 -49243502 - MIR SINE MIR -34 174 97 298 226 151 34 chr17 36195342 36195488 -49242992 + MER69A DNA AcHobo 5 167 -10 616 194 24 8 chr17 36195625 36195749 -49242731 - LTR39 LTR ERV1 0 783 658 526 73 0 0 chr17 36196035 36196103 -49242377 + Alu SINE Alu 2 69 -242 336 208 39 13 chr17 36196297 36196374 -49242106 + MER91A DNA MER1_type 26 104 -92 375 299 24 8 chr17 36197723 36197850 -49240630 - MLT1H LTR MaLR -326 223 95 2049 182 35 68 chr17 36198278 36198789 -49239691 + LTR10E LTR ERV1 115 608 -25 2389 102 13 0 chr17 36198816 36199119 -49239361 + AluSx SINE Alu 1 307 -5 2166 128 0 0 chr17 36199529 36199825 -49238655 + AluSx SINE Alu 1 296 -16 2295 104 0 3 chr17 36200523 36200830 -49237650 + AluSq SINE Alu 7 312 -1 932 110 110 0 chr17 36200863 36200999 -49237481 + AluSg SINE Alu 1 151 -159 1130 116 0 0 chr17 36201699 36201854 -49236626 - AluSc SINE Alu -5 304 150 2414 57 10 24 chr17 36202001 36202297 -49236183 + AluY SINE Alu 1 292 -19 219 36 0 0 chr17 36202541 36202569 -49235911 + (CAAAAA)n Simple_repeat Simple_repeat 2 29 0 2373 101 3 0 chr17 36202933 36203230 -49235250 - AluSg SINE Alu -12 298 1 1795 161 40 6 chr17 36203370 36203692 -49234788 - LTR28 LTR ERV1 -687 333 1 3919 108 16 23 chr17 36203692 36204133 -49234347 - Tigger1 DNA MER2_type -175 2243 1806 2465 86 0 0 chr17 36204133 36204436 -49234044 + AluSq SINE Alu 1 303 -10 3919 108 16 23 chr17 36204436 36204613 -49233867 - Tigger1 DNA MER2_type -612 1806 1629 2308 96 0 3 chr17 36204613 36204906 -49233574 - AluSc SINE Alu -13 296 5 4894 106 47 0 chr17 36204911 36205655 -49232825 - Tigger1 DNA MER2_type -905 1513 735 2320 101 0 9 chr17 36206558 36206874 -49231606 + AluSq SINE Alu 1 313 0 457 84 28 0 chr17 36206890 36206961 -49231519 + MADE1 DNA Mariner 7 79 -1 209 228 35 18 chr17 36206997 36207054 -49231426 - MIR SINE MIR -63 145 88 198 270 48 16 chr17 36207124 36207187 -49231293 - MIR SINE MIR 0 262 198 2322 108 3 0 chr17 36207384 36207691 -49230789 + AluSq SINE Alu 6 313 0 2578 114 28 2 chr17 36207793 36208188 -49230292 - MER21A LTR ERV1 -10 921 517 893 251 124 60 chr17 36208182 36208565 -49229915 + LTR1B LTR ERV1 33 463 -363 * 2349 99 0 0 chr17 36208565 36208859 -49229621 - AluSx SINE Alu -18 294 1 893 251 124 60 chr17 36208859 36209021 -49229459 + LTR1B LTR ERV1 463 613 -213 798 163 103 36 chr17 36209223 36209352 -49229128 - MER21A LTR ERV1 -428 435 316 1899 169 0 3 chr17 36209352 36209653 -49228827 - AluJb SINE Alu -12 300 1 798 163 103 36 chr17 36209653 36209849 -49228631 - MER21A LTR ERV1 -547 316 36 4399 116 14 41 chr17 36209849 36210556 -49227924 - LTR8 LTR ERV1 -3 688 1 798 163 103 36 chr17 36210556 36210595 -49227885 - MER21A LTR ERV1 -827 36 1 1252 199 60 38 chr17 36210654 36210873 -49227607 + MER33 DNA MER1_type 1 231 -2354 2225 114 0 3 chr17 36210873 36211170 -49227310 + AluSx SINE Alu 5 300 -12 1252 199 60 38 chr17 36211170 36211267 -49227213 + MER33 DNA MER1_type 231 324 0 2308 116 0 3 chr17 36211290 36211593 -49226887 - AluSx SINE Alu -10 302 1 258 298 165 13 chr17 36211594 36211721 -49226759 - MIR SINE MIR -7 255 98 2281 157 0 3 chr17 36211721 36212059 -49226421 + MER1B DNA MER1_type 1 337 0 258 298 165 13 chr17 36212059 36212089 -49226391 - MIR SINE MIR -164 98 74 956 77 32 26 chr17 36212095 36212251 -49226229 + L1MA3 LINE L1 5873 6029 -276 1827 207 110 78 chr17 36212380 36213099 -49225381 - LTR1B LTR ERV1 -84 742 1 1596 98 29 36 chr17 36213099 36213219 -49225261 + L1MA2 LINE L1 6027 6146 -158 1952 164 13 0 chr17 36213219 36213524 -49224956 + AluJb SINE Alu 1 309 -3 1596 98 29 36 chr17 36213524 36213680 -49224800 + L1MA2 LINE L1 6146 6301 -3 2408 81 0 3 chr17 36213772 36214067 -49224413 - AluY SINE Alu -17 294 1 24 0 0 0 chr17 36214067 36214091 -49224389 + AT_rich Low_complexity Low_complexity 1 24 0 327 292 0 31 chr17 36214133 36214229 -49224251 - MIR SINE MIR -93 115 23 783 246 99 16 chr17 36214253 36214505 -49223975 - L3 LINE CR1 -27 1550 1278 1559 189 16 31 chr17 36215344 36215661 -49222819 + AluJo SINE Alu 1 312 0 2051 219 13 5 chr17 36215772 36216164 -49222316 - MSTD LTR MaLR 0 396 2 442 304 101 42 chr17 36216216 36216433 -49222047 - MIR SINE MIR -15 247 18 284 255 0 28 chr17 36216459 36216565 -49221915 - L1MC5 LINE L1 -51 7910 7808 2245 87 45 0 chr17 36216580 36216868 -49221612 - AluSq SINE Alu -12 301 1 1086 78 0 42 chr17 36216868 36217010 -49221470 - AluSq/x SINE Alu -177 136 1 305 222 28 0 chr17 36217021 36217093 -49221387 - L1MC5 LINE L1 -186 7775 7702 2098 79 45 0 chr17 36217393 36217658 -49220822 + AluSp SINE Alu 15 291 -22 429 141 0 0 chr17 36217658 36217729 -49220751 + (GGGAA)n Simple_repeat Simple_repeat 1 71 0 423 0 0 0 chr17 36217798 36217845 -49220635 + (TG)n Simple_repeat Simple_repeat 1 47 0 243 79 0 0 chr17 36218078 36218116 -49220364 + (TG)n Simple_repeat Simple_repeat 2 39 0 1824 152 20 26 chr17 36218317 36218619 -49219861 + AluJb SINE Alu 1 300 -12 2183 99 0 23 chr17 36218641 36218943 -49219537 + AluSx SINE Alu 1 295 -17 2273 99 10 0 chr17 36219502 36219796 -49218684 - AluSx SINE Alu -14 298 2 357 47 0 0 chr17 36220274 36220317 -49218163 + L2 LINE L2 3262 3304 -9 271 253 40 0 chr17 36220317 36220392 -49218088 + GA-rich Low_complexity Low_complexity 4 81 0 619 300 162 48 chr17 36220499 36220662 -49217818 - L2 LINE L2 -775 2539 2396 2325 116 0 6 chr17 36220662 36220973 -49217507 - AluSx SINE Alu -3 309 1 619 300 162 48 chr17 36220973 36221745 -49216735 - L2 LINE L2 -918 2396 1497 215 411 0 0 chr17 36221841 36221914 -49216566 - MIR SINE MIR -138 124 52 * 380 274 90 112 chr17 36221911 36222323 -49216157 - L2 LINE L2 -27 3245 2843 829 280 143 42 chr17 36222363 36222916 -49215564 - L2 LINE L2 -561 2753 2145 2099 144 13 0 chr17 36222964 36223269 -49215211 + AluJb SINE Alu 1 309 -3 2269 107 13 7 chr17 36223375 36223684 -49214796 + AluSx SINE Alu 1 311 -1 1146 122 10 51 chr17 36223686 36223883 -49214597 + AluSg/x SINE Alu 120 308 -2 1130 265 103 72 chr17 36224757 36225103 -49213377 + L1ME LINE L1 58 392 -5727 2535 81 0 0 chr17 36225103 36225411 -49213069 + AluY SINE Alu 1 308 -3 1130 265 103 72 chr17 36225411 36225520 -49212960 + L1ME LINE L1 392 496 -5623 2042 119 0 51 chr17 36225520 36225854 -49212626 + AluSq SINE Alu 1 313 0 1130 265 103 72 chr17 36225854 36226127 -49212353 + L1ME LINE L1 496 759 -5360 2332 103 0 7 chr17 36226127 36226437 -49212043 + AluSc SINE Alu 1 308 -1 1130 265 103 72 chr17 36226437 36226687 -49211793 + L1ME LINE L1 759 1068 -5051 1936 137 11 0 chr17 36226728 36227013 -49211467 + AluJo SINE Alu 14 301 -11 180 77 0 0 chr17 36227013 36227039 -49211441 + (GGGGA)n Simple_repeat Simple_repeat 1 26 0 491 261 86 60 chr17 36227048 36227242 -49211238 + L1ME LINE L1 1214 1402 -1088 2305 109 10 6 chr17 36227242 36227554 -49210926 + AluSq SINE Alu 1 313 0 491 261 86 60 chr17 36227554 36227735 -49210745 + L1ME LINE L1 1402 1617 -873 350 327 43 63 chr17 36228458 36228761 -49209719 + L1ME LINE L1 1829 2125 -4185 360 0 0 0 chr17 36228818 36228858 -49209622 + (CA)n Simple_repeat Simple_repeat 2 41 0 2196 96 0 0 chr17 36228893 36229164 -49209316 + AluSx SINE Alu 12 282 -30 182 150 25 0 chr17 36229165 36229205 -49209275 + (TA)n Simple_repeat Simple_repeat 1 41 0 1578 199 7 20 chr17 36229242 36229544 -49208936 + AluJo SINE Alu 2 299 -13 784 168 0 0 chr17 36229673 36229798 -49208682 + FLAM_C SINE Alu 2 126 -7 2340 87 0 7 chr17 36229814 36230112 -49208368 + AluSx SINE Alu 1 296 -16 1342 274 78 14 chr17 36230125 36230792 -49207688 + L1ME LINE L1 4367 5076 -1053 2063 125 10 22 chr17 36230796 36231107 -49207373 - AluSx SINE Alu -1 311 5 1231 172 0 20 chr17 36231147 36231292 -49207188 + MER20 DNA MER1_type 19 160 -59 336 94 0 0 chr17 36231292 36231345 -49207135 + (CA)n Simple_repeat Simple_repeat 2 54 0 1231 172 0 20 chr17 36231345 36231403 -49207077 + MER20 DNA MER1_type 160 218 -1 940 239 73 90 chr17 36231462 36231633 -49206847 + L1ME LINE L1 5241 5414 -731 1553 179 19 4 chr17 36231633 36231895 -49206585 + AluJo SINE Alu 1 266 -46 940 239 73 90 chr17 36231895 36231942 -49206538 + L1ME LINE L1 5414 5460 -685 2462 67 3 0 chr17 36231942 36232240 -49206240 + AluSx SINE Alu 1 299 -13 940 239 73 90 chr17 36232240 36232584 -49205896 + L1ME LINE L1 5460 5794 -351 1522 130 155 47 chr17 36232636 36232665 -49205815 - MSTA LTR MaLR -12 416 392 2429 93 3 0 chr17 36232665 36232975 -49205505 + AluSq SINE Alu 1 311 -2 1522 130 155 47 chr17 36232975 36233267 -49205213 - MSTA LTR MaLR -36 392 60 3671 156 55 93 chr17 36233471 36233703 -49204777 + L1MB3 LINE L1 4769 5008 -1175 2469 84 0 0 chr17 36233703 36234012 -49204468 + AluSg SINE Alu 1 309 -1 3671 156 55 93 chr17 36234012 36234196 -49204284 + L1MB3 LINE L1 5008 5198 -985 1991 152 0 3 chr17 36234196 36234492 -49203988 + AluJb SINE Alu 1 295 -17 3671 156 55 93 chr17 36234492 36234707 -49203773 + L1MB3 LINE L1 5198 5420 -763 2485 47 0 13 chr17 36234707 36235005 -49203475 + AluY SINE Alu 1 294 -17 2008 110 43 3 chr17 36235012 36235294 -49203186 + AluSq SINE Alu 1 293 -20 3671 156 55 93 chr17 36235294 36235553 -49202927 + L1MB3 LINE L1 5426 5693 -490 2373 93 7 7 chr17 36235553 36235863 -49202617 + AluSq SINE Alu 1 310 -3 3671 156 55 93 chr17 36235863 36235910 -49202570 + L1MB3 LINE L1 5693 5740 -443 2313 67 0 54 chr17 36235910 36236225 -49202255 + AluSq SINE Alu 1 298 -15 3671 156 55 93 chr17 36236225 36236759 -49201721 + L1MB3 LINE L1 5740 6131 -52 2533 69 0 0 chr17 36236759 36237062 -49201418 + AluSg SINE Alu 1 303 -7 3671 156 55 93 chr17 36237062 36237111 -49201369 + L1MB3 LINE L1 6131 6180 -3 2171 107 0 46 chr17 36237252 36237578 -49200902 - AluSx SINE Alu -1 311 1 1670 187 7 17 chr17 36237579 36237878 -49200602 - AluJo SINE Alu -16 296 1 2214 113 10 0 chr17 36237902 36238195 -49200285 - AluSx SINE Alu -16 296 1 1830 157 7 17 chr17 36238529 36238822 -49199658 - AluJb SINE Alu -22 290 1 2017 161 0 0 chr17 36239233 36239543 -49198937 + AluSx SINE Alu 1 310 -2 2160 123 0 7 chr17 36240113 36240414 -49198066 + AluSx SINE Alu 5 303 -9 943 194 0 6 chr17 36240500 36240660 -49197820 + AluJb SINE Alu 136 294 -18 750 189 18 53 chr17 36240716 36240906 -49197574 - FAM SINE Alu 0 175 1 2218 122 3 0 chr17 36240916 36241220 -49197260 - AluSx SINE Alu -7 305 1 263 247 68 0 chr17 36241267 36241340 -49197140 + MIR3 SINE MIR 108 185 -23 23 0 0 0 chr17 36241792 36241815 -49196665 + AT_rich Low_complexity Low_complexity 1 23 0 1342 79 6 6 chr17 36241817 36241994 -49196486 - AluSq SINE Alu -4 309 133 200 33 0 33 chr17 36241994 36242024 -49196456 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2208 102 0 3 chr17 36242024 36242309 -49196171 - AluSx SINE Alu -28 284 1 3576 88 45 18 chr17 36242310 36242824 -49195656 - L1MC1 LINE L1 -229 6104 5577 1074 146 6 0 chr17 36242825 36242983 -49195497 + FRAM SINE Alu 1 158 -18 384 168 0 15 chr17 36242992 36243066 -49195414 + AluJb SINE Alu 67 126 -176 850 86 18 0 chr17 36243077 36243200 -49195280 - L1MC/D LINE L1 -586 5588 5468 2265 108 0 10 chr17 36243214 36243521 -49194959 + AluSx SINE Alu 4 307 -5 302 274 45 62 chr17 36243794 36243973 -49194507 - L1ME4a LINE L1 -2 6119 5944 249 228 18 0 chr17 36244109 36244166 -49194314 + MIR SINE MIR 89 146 -62 1480 126 105 4 chr17 36244325 36244564 -49193916 - AluJb SINE Alu -1 311 49 256 114 0 0 chr17 36244575 36244610 -49193870 + Alu SINE Alu 2 36 -266 2382 101 3 0 chr17 36244729 36245036 -49193444 + AluSx SINE Alu 2 309 -3 2495 64 0 22 chr17 36245066 36245377 -49193103 + AluY SINE Alu 1 304 -7 1372 153 77 35 chr17 36245845 36245882 -49192598 + MLT1J LTR MaLR 6 40 -471 1995 141 13 0 chr17 36245882 36246181 -49192299 - AluSx SINE Alu -9 303 1 1372 153 77 35 chr17 36246181 36246554 -49191926 + MLT1J LTR MaLR 40 485 -26 1212 173 0 5 chr17 36246787 36246978 -49191502 - AluJ SINE Alu -12 300 111 213 213 0 0 chr17 36246992 36247039 -49191441 + (TATATG)n Simple_repeat Simple_repeat 2 48 0 189 0 0 0 chr17 36247039 36247060 -49191420 + (CA)n Simple_repeat Simple_repeat 2 22 0 323 303 0 0 chr17 36247061 36247150 -49191330 - L1MC4 LINE L1 -1339 6703 6615 310 287 23 0 chr17 36247075 36247162 -49191318 + L1MC4 LINE L1 6614 6702 -1340 * 237 250 23 0 chr17 36247163 36247251 -49191229 - L1MC4 LINE L1 -1339 6703 6614 285 98 0 0 chr17 36247257 36247298 -49191182 + (TA)n Simple_repeat Simple_repeat 1 41 0 811 111 0 26 chr17 36247298 36247415 -49191065 - AluJ SINE Alu -186 126 13 950 144 0 13 chr17 36247427 36247580 -49190900 - FRAM SINE Alu -11 165 15 1927 138 0 10 chr17 36247584 36247875 -49190605 - AluSq SINE Alu -20 293 6 207 173 0 39 chr17 36247887 36247939 -49190541 + T-rich Low_complexity Low_complexity 6 55 0 1980 90 83 42 chr17 36247974 36248263 -49190217 - AluSx SINE Alu -11 301 1 1303 125 90 39 chr17 36248272 36248426 -49190054 - L1MB3 LINE L1 -2 6181 6007 2215 117 3 3 chr17 36248426 36248725 -49189755 + AluSx SINE Alu 1 299 -13 1303 125 90 39 chr17 36248725 36248826 -49189654 - L1MB3 LINE L1 -176 6007 5913 2472 52 0 0 chr17 36248829 36249119 -49189361 + AluY SINE Alu 1 290 -21 1470 126 61 82 chr17 36249128 36249422 -49189058 + AluSx SINE Alu 1 288 -24 207 100 0 0 chr17 36249463 36249493 -49188987 + (ATG)n Simple_repeat Simple_repeat 2 31 0 23 0 0 0 chr17 36249614 36249637 -49188843 + AT_rich Low_complexity Low_complexity 1 23 0 298 248 51 74 chr17 36249662 36249710 -49188770 + L1ME4a LINE L1 5684 5732 -389 2225 112 0 0 chr17 36249710 36250006 -49188474 + AluSx SINE Alu 11 306 -6 298 248 51 74 chr17 36250006 36250117 -49188363 + L1ME4a LINE L1 5732 5822 -299 239 200 50 33 chr17 36250145 36250205 -49188275 + L1ME4a LINE L1 5976 6036 -85 1806 154 33 26 chr17 36250292 36250475 -49188005 - AluJo SINE Alu -5 307 120 234 0 0 0 chr17 36250475 36250501 -49187979 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 1806 154 33 26 chr17 36250501 36250622 -49187858 - AluJo SINE Alu -192 120 1 1918 147 0 11 chr17 36250650 36250935 -49187545 + AluSx SINE Alu 1 282 -30 2223 121 0 16 chr17 36250995 36251308 -49187172 - AluSx SINE Alu -4 308 1 2163 103 3 0 chr17 36251448 36251758 -49186722 + AluSp SINE Alu 1 311 0 347 253 74 0 chr17 36252247 36252342 -49186138 - MER5A DNA MER1_type -80 109 8 1690 166 29 0 chr17 36252393 36252671 -49185809 + AluJo SINE Alu 9 294 -18 328 162 54 153 chr17 36252987 36253028 -49185452 - MER69A DNA AcHobo -2426 100 57 2373 95 0 0 chr17 36253028 36253324 -49185156 + AluSx SINE Alu 1 296 -16 328 162 54 153 chr17 36253324 36253393 -49185087 - MER69A DNA AcHobo -2469 57 1 433 256 242 49 chr17 36253957 36254304 -49184176 + L2 LINE L2 1943 2356 -958 786 236 28 11 chr17 36254335 36254497 -49183983 + FRAM SINE Alu 1 163 -149 2428 87 10 0 chr17 36254497 36254807 -49183673 + AluSp SINE Alu 1 313 0 786 236 28 11 chr17 36254807 36254822 -49183658 + FRAM SINE Alu 163 176 0 711 239 161 53 chr17 36254845 36255200 -49183280 + L2 LINE L2 2396 2788 -526 2271 107 0 10 chr17 36255314 36255624 -49182856 + AluSx SINE Alu 1 307 -5 1759 133 74 0 chr17 36255650 36255935 -49182545 + AluJb SINE Alu 1 306 -6 438 187 0 0 chr17 36255936 36256011 -49182469 + AluS SINE Alu 2 76 -237 474 316 56 28 chr17 36256176 36256499 -49181981 + L2 LINE L2 2967 3298 -15 180 77 0 0 chr17 36256502 36256528 -49181952 + (TGAA)n Simple_repeat Simple_repeat 2 27 0 864 66 0 0 chr17 36256681 36256787 -49181693 - FLAM_C SINE Alu -32 111 6 25 31 0 0 chr17 36258026 36258058 -49180422 + AT_rich Low_complexity Low_complexity 1 32 0 2204 88 0 3 chr17 36258228 36258525 -49179955 + AluSg SINE Alu 1 296 -14 2223 79 3 33 chr17 36258831 36259136 -49179344 - AluY SINE Alu -15 296 1 1875 92 0 113 chr17 36259579 36259907 -49178573 + AluSx SINE Alu 1 291 -11 1470 122 126 16 chr17 36260041 36260181 -49178299 - AluSg1 SINE Alu 0 305 182 1741 120 0 0 chr17 36260181 36260415 -49178065 - AluSx SINE Alu -78 234 1 1470 122 126 16 chr17 36260415 36260551 -49177929 - AluSg1 SINE Alu -123 182 1 1772 145 16 45 chr17 36260628 36260975 -49177505 + AluJo SINE Alu 8 312 0 274 135 0 0 chr17 36261046 36261083 -49177397 - Alu SINE Alu -263 37 1 2258 111 3 0 chr17 36261252 36261549 -49176931 + AluSx SINE Alu 1 298 -14 2048 109 36 0 chr17 36262075 36262395 -49176085 - AluSp SINE Alu 0 330 1 180 111 0 0 chr17 36262563 36262590 -49175890 + (ATG)n Simple_repeat Simple_repeat 2 28 0 2369 119 0 0 chr17 36263797 36264107 -49174373 + AluSx SINE Alu 1 310 -2 695 192 8 0 chr17 36264451 36264576 -49173904 - FLAM_A SINE Alu -7 126 1 1094 118 0 7 chr17 36264622 36264774 -49173706 + AluJ SINE Alu 1 151 -161 673 192 16 0 chr17 36264939 36265064 -49173416 + AluJ SINE Alu 157 283 -29 303 28 0 0 chr17 36265068 36265104 -49173376 + (CA)n Simple_repeat Simple_repeat 1 36 0 2263 123 10 0 chr17 36265120 36265428 -49173052 - AluSx SINE Alu -1 311 1 484 189 0 11 chr17 36265649 36265739 -49172741 + AluJo SINE Alu 125 213 -99 1368 142 75 37 chr17 36266475 36266600 -49171880 + AluJo SINE Alu 29 148 -164 2293 95 10 0 chr17 36266600 36266894 -49171586 + AluSc SINE Alu 1 297 -12 1368 142 75 37 chr17 36266894 36267036 -49171444 + AluJo SINE Alu 148 306 -6 2277 123 0 0 chr17 36268115 36268423 -49170057 - AluSq SINE Alu -5 308 1 1301 92 0 0 chr17 36268579 36268742 -49169738 - AluY SINE Alu -16 295 133 2434 87 0 0 chr17 36268742 36269042 -49169438 - AluSg SINE Alu -1 309 10 1388 130 20 0 chr17 36269084 36269284 -49169196 + AluSg/x SINE Alu 94 297 -13 2387 84 0 3 chr17 36269326 36269623 -49168857 - AluY SINE Alu -15 296 1 394 164 16 131 chr17 36270324 36270394 -49168086 - MIR SINE MIR -1 261 208 2256 93 0 17 chr17 36270394 36270717 -49167763 - AluSx SINE Alu 0 319 2 394 164 16 131 chr17 36270717 36270767 -49167713 - MIR SINE MIR -54 208 154 2281 112 0 0 chr17 36271091 36271386 -49167094 - AluSx SINE Alu -17 295 1 2173 120 3 7 chr17 36271393 36271561 -49166919 - AluSx SINE Alu -13 299 131 378 0 0 0 chr17 36271561 36271603 -49166877 + (TG)n Simple_repeat Simple_repeat 1 42 0 2173 120 3 7 chr17 36271603 36271734 -49166746 - AluSx SINE Alu -181 131 1 890 150 0 0 chr17 36271775 36271908 -49166572 + AluSq/x SINE Alu 1 133 -180 328 182 0 0 chr17 36272153 36272208 -49166272 + Alu SINE Alu 241 295 -7 1943 144 13 0 chr17 36272386 36272684 -49165796 - AluY SINE Alu -9 302 1 2111 123 14 0 chr17 36272686 36272978 -49165502 - AluSq SINE Alu -15 298 3 1888 168 7 0 chr17 36273235 36273533 -49164947 + AluJb SINE Alu 1 300 -12 1500 192 49 0 chr17 36273538 36273829 -49164651 + AluJo SINE Alu 1 300 -12 904 134 0 8 chr17 36274129 36274263 -49164217 + FLAM_C SINE Alu 1 133 0 383 129 14 29 chr17 36274278 36274348 -49164132 + Alu SINE Alu 233 301 0 2088 148 14 0 chr17 36274375 36274727 -49163753 + L1MB4 LINE L1 5824 6180 0 520 102 0 23 chr17 36274735 36274823 -49163657 + L1MB8 LINE L1 6093 6178 0 811 210 25 6 chr17 36274834 36274991 -49163489 + AluJ SINE Alu 138 297 -15 2029 152 25 52 chr17 36274998 36275251 -49163229 + L1MB8 LINE L1 5442 5681 -503 1849 154 0 13 chr17 36275251 36275594 -49162886 - AluJb SINE Alu 0 312 1 2029 152 25 52 chr17 36275594 36275742 -49162738 + L1MB8 LINE L1 5681 5832 -352 1094 53 29 100 chr17 36275741 36275810 -49162670 + L1PA11 LINE L1 5996 6068 -106 * 1181 92 0 6 chr17 36275810 36275974 -49162506 + L1PA7 LINE L1 5992 6154 0 1094 53 29 100 chr17 36275974 36276074 -49162406 + L1PA11 LINE L1 6068 6153 -21 1831 148 5 56 chr17 36276079 36276214 -49162266 + L1MB8 LINE L1 5808 5948 -230 2149 104 3 7 chr17 36276214 36276521 -49161959 + AluSx SINE Alu 1 306 -6 1831 148 5 56 chr17 36276521 36276776 -49161704 + L1MB8 LINE L1 5948 6178 0 2236 95 0 7 chr17 36276796 36277101 -49161379 - AluY SINE Alu -8 303 1 1430 143 83 30 chr17 36277122 36277387 -49161093 + AluJo SINE Alu 3 281 -31 943 162 0 23 chr17 36277408 36277581 -49160899 - AluSg/x SINE Alu -9 301 133 355 298 35 0 chr17 36277582 36277698 -49160782 - L1MC4 LINE L1 -1339 6703 6613 386 120 27 93 chr17 36277591 36277666 -49160814 + L1MCa LINE L1 1995 2064 -4362 314 284 23 23 chr17 36277669 36277757 -49160723 - L1MC4 LINE L1 -1339 6703 6616 * 363 190 0 66 chr17 36277728 36277825 -49160655 + L1MC4 LINE L1 1996 6985 -1337 346 284 43 23 chr17 36277817 36277958 -49160522 - L1MC4 LINE L1 -1339 6703 6613 * 329 215 46 0 chr17 36277948 36278013 -49160467 + L1MCa LINE L1 1996 2063 -4363 * 359 274 71 0 chr17 36277968 36278052 -49160428 - L1MC4 LINE L1 -1340 6702 6613 * 385 274 85 0 chr17 36278043 36278160 -49160320 - L1MC4 LINE L1 -1139 6701 6550 334 258 0 43 chr17 36278179 36278272 -49160208 - L1MC4 LINE L1 -1341 6701 6613 314 278 22 33 chr17 36278263 36278280 -49160200 - L1MC4 LINE L1 -1341 6701 6685 * 917 110 0 11 chr17 36278280 36278462 -49160018 + (TA)n Simple_repeat Simple_repeat 1 180 0 314 278 22 33 chr17 36278462 36278534 -49159946 - L1MC4 LINE L1 -1357 6685 6613 * 318 243 0 14 chr17 36278492 36278562 -49159918 + L1MCa LINE L1 1996 2064 -4362 * 351 318 0 14 chr17 36278517 36278664 -49159816 - L1MC4 LINE L1 -1339 6703 6613 311 252 53 46 chr17 36278568 36278699 -49159781 + L1MCa LINE L1 1933 2064 -4362 * 378 132 0 0 chr17 36278703 36278779 -49159701 + (TA)n Simple_repeat Simple_repeat 1 76 0 2311 71 0 0 chr17 36278779 36279074 -49159406 - AluY SINE Alu -16 295 1 889 131 0 0 chr17 36279079 36279209 -49159271 - AluSq/x SINE Alu -180 133 4 228 135 0 0 chr17 36279857 36279894 -49158586 + (CA)n Simple_repeat Simple_repeat 2 38 0 1258 95 0 22 chr17 36279894 36280007 -49158473 - AluSc SINE Alu -65 244 135 2362 73 3 0 chr17 36280007 36280308 -49158172 - AluY SINE Alu -9 302 1 1258 95 0 22 chr17 36280308 36280373 -49158107 - AluSc SINE Alu -174 135 70 618 216 0 0 chr17 36280373 36280484 -49157996 - FLAM_C SINE Alu -31 112 2 393 22 0 0 chr17 36280491 36280537 -49157943 + (CA)n Simple_repeat Simple_repeat 1 46 0 2004 96 36 0 chr17 36280539 36280819 -49157661 - AluSx SINE Alu -22 290 1 29 28 0 0 chr17 36281332 36281368 -49157112 + AT_rich Low_complexity Low_complexity 1 36 0 1978 110 7 4 chr17 36282109 36282416 -49156064 - AluSg SINE Alu 0 308 1 463 153 118 118 chr17 36282565 36282735 -49155745 + L1MC5 LINE L1 7762 7931 -30 1654 156 7 14 chr17 36282753 36283035 -49155445 + AluJb SINE Alu 1 280 -32 338 250 0 57 chr17 36283035 36283123 -49155357 - L1MC4 LINE L1 -1314 6728 6646 222 139 0 47 chr17 36283126 36283169 -49155311 - L2 LINE L2 -4 3309 3269 1058 180 4 69 chr17 36283183 36283259 -49155221 + AluJo SINE Alu 64 143 -169 2066 126 7 0 chr17 36283259 36283568 -49154912 + AluSx SINE Alu 1 311 -1 1058 180 4 69 chr17 36283568 36283736 -49154744 + AluJo SINE Alu 143 292 -20 1589 189 0 10 chr17 36283750 36284046 -49154434 + AluJo SINE Alu 1 293 -19 470 349 35 42 chr17 36284121 36284405 -49154075 - L2 LINE L2 -390 2924 2643 245 326 45 103 chr17 36284404 36284646 -49153834 + L2 LINE L2 3030 3257 -15 * 2838 13 0 0 chr17 36284762 36285080 -49153400 + AluYb8 SINE Alu 1 318 0 348 272 228 22 chr17 36285204 36285340 -49153140 + L2 LINE L2 3109 3272 0 213 39 0 0 chr17 36285379 36285405 -49153075 + (TA)n Simple_repeat Simple_repeat 2 27 0 2205 100 3 0 chr17 36285406 36285717 -49152763 - AluSx SINE Alu 0 312 1 21 36 0 0 chr17 36286494 36286522 -49151958 + AT_rich Low_complexity Low_complexity 1 28 0 430 274 17 20 chr17 36286522 36286669 -49151811 - MIR SINE MIR -62 146 31 2279 78 0 3 chr17 36286761 36287067 -49151413 + AluY SINE Alu 1 305 -6 1744 109 0 0 chr17 36287121 36287359 -49151121 + AluSx SINE Alu 50 287 -25 29 0 0 0 chr17 36287359 36287388 -49151092 + AT_rich Low_complexity Low_complexity 1 29 0 240 235 0 0 chr17 36288107 36288158 -49150322 + (TA)n Simple_repeat Simple_repeat 1 51 0 885 160 7 0 chr17 36288380 36288553 -49149927 + FRAM SINE Alu 2 175 0 1981 131 0 7 chr17 36289502 36289799 -49148681 - AluSx SINE Alu -16 296 2 2161 68 3 55 chr17 36290541 36290850 -49147630 + AluSg SINE Alu 2 294 -16 23 33 0 0 chr17 36292074 36292104 -49146376 + AT_rich Low_complexity Low_complexity 1 30 0 1817 134 21 3 chr17 36292327 36292611 -49145869 - AluSx SINE Alu -23 289 1 1822 127 3 56 chr17 36292621 36292945 -49145535 - AluSg SINE Alu -3 307 1 216 0 0 0 chr17 36292954 36292978 -49145502 + (TTTTG)n Simple_repeat Simple_repeat 4 27 0 1946 108 4 7 chr17 36292978 36293251 -49145229 - AluSx SINE Alu -32 280 9 6689 57 3 81 chr17 36293458 36294771 -49143709 + SVA Other Other 432 1434 0 2062 125 0 10 chr17 36294918 36295231 -49143249 + AluSq SINE Alu 1 310 -3 735 190 0 7 chr17 36296422 36296564 -49141916 - FLAM_C SINE Alu -1 142 2 2152 113 3 0 chr17 36296658 36296968 -49141512 - AluSx SINE Alu -1 311 1 2141 119 0 0 chr17 36297089 36297400 -49141080 - AluSx SINE Alu -1 311 1 375 23 0 0 chr17 36297589 36297633 -49140847 + (CA)n Simple_repeat Simple_repeat 2 45 0 180 111 0 0 chr17 36298799 36298826 -49139654 + (T)n Simple_repeat Simple_repeat 1 27 0 2148 86 38 0 chr17 36299736 36300026 -49138454 + AluSg1 SINE Alu 1 301 -8 1124 133 0 11 chr17 36300026 36300207 -49138273 + AluSg/x SINE Alu 134 312 0 2187 98 3 0 chr17 36300213 36300499 -49137981 + AluSp SINE Alu 1 287 -26 259 297 14 14 chr17 36300518 36300592 -49137888 - MIR SINE MIR -187 75 2 995 105 0 0 chr17 36300751 36300884 -49137596 - FLAM_C SINE Alu 0 133 1 414 0 0 0 chr17 36301033 36301079 -49137401 + (TTTA)n Simple_repeat Simple_repeat 3 48 0 1587 61 0 0 chr17 36301082 36301278 -49137202 - AluY SINE Alu -31 280 85 229 305 171 2 chr17 36302096 36302249 -49136231 + MIR3 SINE MIR 2 183 -69 207 0 0 0 chr17 36302824 36302847 -49135633 + (CA)n Simple_repeat Simple_repeat 2 24 0 232 145 16 32 chr17 36302865 36302927 -49135553 + (CA)n Simple_repeat Simple_repeat 2 62 0 186 103 0 0 chr17 36303144 36303173 -49135307 + (CA)n Simple_repeat Simple_repeat 1 29 0 195 42 0 0 chr17 36303520 36303544 -49134936 + (CAGCC)n Simple_repeat Simple_repeat 3 26 0 1753 141 3 61 chr17 36306450 36306572 -49131908 + AluJo SINE Alu 1 129 -183 1919 112 32 4 chr17 36306572 36306850 -49131630 - AluSx SINE Alu -13 299 14 1753 141 3 61 chr17 36306850 36307054 -49131426 + AluJo SINE Alu 129 308 -4 210 171 0 0 chr17 36307305 36307340 -49131140 + A-rich Low_complexity Low_complexity 1 35 0 637 279 228 13 chr17 36307478 36307845 -49130635 + L2 LINE L2 2555 2842 -471 2162 109 3 3 chr17 36307845 36308149 -49130331 - AluSq SINE Alu -9 304 1 2005 102 17 24 chr17 36308156 36308451 -49130029 - AluSx SINE Alu -19 293 1 637 279 228 13 chr17 36308451 36308647 -49129833 + L2 LINE L2 2846 3264 -49 360 94 0 0 chr17 36310002 36310055 -49128425 + (TG)n Simple_repeat Simple_repeat 2 54 0 414 268 65 0 chr17 36310540 36310663 -49127817 + MIR SINE MIR 76 206 -56 2224 92 3 3 chr17 36310706 36311009 -49127471 - AluSx SINE Alu -9 303 1 304 311 62 25 chr17 36311090 36311251 -49127229 - MIR SINE MIR -12 250 84 203 145 40 105 chr17 36312269 36312345 -49126135 + (CCCTAA)n Simple_repeat Simple_repeat 6 76 0 2047 111 0 26 chr17 36312635 36312941 -49125539 + AluSx SINE Alu 1 298 -14 266 295 180 16 chr17 36313214 36313336 -49125144 - MIR SINE MIR -35 227 86 2076 111 0 0 chr17 36313706 36313995 -49124485 + AluSx SINE Alu 1 289 -23 477 264 61 31 chr17 36313995 36314158 -49124322 + MER5A DNA MER1_type 17 184 -5 1382 206 49 61 chr17 36314171 36314516 -49123964 + MER58B DNA MER1_type 1 341 0 1870 144 7 0 chr17 36314681 36314965 -49123515 + AluSx SINE Alu 1 286 -26 302 0 0 26 chr17 36314967 36315006 -49123474 + (TGAA)n Simple_repeat Simple_repeat 3 40 0 2204 96 0 3 chr17 36315101 36315403 -49123077 - AluSg SINE Alu -9 301 1 357 262 39 0 chr17 36316761 36316864 -49121616 + MIR3 SINE MIR 82 188 -20 256 200 92 0 chr17 36317169 36317234 -49121246 - MIR SINE MIR -113 149 79 252 245 255 0 chr17 36317319 36317425 -49121055 - MER94 DNA DNA -1 133 1 249 266 271 36 chr17 36318107 36318155 -49120325 - MIR SINE MIR -24 238 203 1750 149 7 17 chr17 36318155 36318483 -49119997 - AluSx SINE Alu 0 312 1 249 266 271 36 chr17 36318483 36318626 -49119854 - MIR SINE MIR -59 203 2 1783 143 3 13 chr17 36318649 36318950 -49119530 - AluJo SINE Alu -10 302 5 1107 215 213 35 chr17 36318983 36319178 -49119302 + L1ME3A LINE L1 5392 5551 -619 2030 92 16 30 chr17 36319178 36319483 -49118997 - AluY SINE Alu -10 301 1 1107 215 213 35 chr17 36319483 36319775 -49118705 + L1ME3A LINE L1 5551 5966 -204 266 232 125 18 chr17 36319810 36319922 -49118558 + LTR37B LTR ERV1 51 174 -294 328 207 93 125 chr17 36319985 36320109 -49118371 + LTR37B LTR ERV1 198 324 -144 2259 110 0 0 chr17 36320109 36320418 -49118062 - AluSx SINE Alu -3 309 1 328 207 93 125 chr17 36320418 36320573 -49117907 + LTR37B LTR ERV1 324 468 0 1290 180 36 102 chr17 36321041 36321346 -49117134 + AluJo SINE Alu 3 287 -15 307 222 56 14 chr17 36321403 36321475 -49117005 - MIR SINE MIR -79 183 109 2159 115 0 6 chr17 36321726 36322040 -49116440 + AluSx SINE Alu 1 312 0 738 109 78 55 chr17 36322221 36322349 -49116131 + FLAM_C SINE Alu 3 133 0 1694 168 3 0 chr17 36322368 36322660 -49115820 + AluJo SINE Alu 1 293 -19 2342 75 0 7 chr17 36322662 36322968 -49115512 + AluY SINE Alu 1 304 -7 514 316 6 18 chr17 36323050 36323221 -49115259 - MER5A DNA MER1_type -2 187 19 2366 84 0 0 chr17 36324039 36324336 -49114144 - AluSc SINE Alu -12 297 1 1611 159 7 66 chr17 36324337 36324626 -49113854 - AluJo SINE Alu -18 294 23 1993 88 70 18 chr17 36324699 36324983 -49113497 + AluSx SINE Alu 1 299 -13 259 248 25 83 chr17 36325004 36325125 -49113355 - MER112 DNA MER1_type -144 116 3 483 299 13 57 chr17 36326493 36326759 -49111721 - MIR SINE MIR 0 262 5 183 288 14 41 chr17 36327105 36327178 -49111302 + L3b LINE CR1 1350 1420 -163 347 248 24 2 chr17 36327899 36328013 -49110467 + MIR SINE MIR 38 152 -62 332 253 228 6 chr17 36328301 36328459 -49110021 + MIR3 SINE MIR 5 197 -11 1911 92 38 20 chr17 36329114 36329407 -49109073 + AluSx SINE Alu 2 299 -13 765 124 31 23 chr17 36329431 36329560 -49108920 + FLAM_C SINE Alu 13 142 -1 2037 133 0 10 chr17 36329691 36329999 -49108481 + AluJb SINE Alu 1 305 -7 571 289 129 0 chr17 36330130 36330331 -49108149 - MIR SINE MIR 0 262 36 213 327 25 66 chr17 36331004 36331131 -49107349 - MIR SINE MIR -62 146 45 465 237 69 40 chr17 36331311 36331484 -49106996 + MER5A DNA MER1_type 7 184 -5 482 322 78 24 chr17 36331514 36331719 -49106761 + MIR SINE MIR 17 232 -30 279 203 0 0 chr17 36331719 36331778 -49106702 + (CA)n Simple_repeat Simple_repeat 1 59 0 360 0 0 0 chr17 36332137 36332177 -49106303 + (TG)n Simple_repeat Simple_repeat 2 41 0 1662 185 20 0 chr17 36332618 36332916 -49105564 - AluJo SINE Alu -8 304 1 231 337 79 0 chr17 36333025 36333126 -49105354 + MIR SINE MIR 106 214 -48 428 248 51 22 chr17 36333156 36333293 -49105187 + MIR SINE MIR 68 208 -54 183 80 0 0 chr17 36333511 36333536 -49104944 + (CACCC)n Simple_repeat Simple_repeat 3 27 0 2037 125 87 12 chr17 36334944 36335279 -49103201 - MER46B DNA MER2_type 0 236 2 2159 100 0 3 chr17 36335299 36335616 -49102864 + AluSg SINE Alu 1 316 0 503 287 122 16 chr17 36335631 36335819 -49102661 - MIR SINE MIR -43 219 12 264 177 48 16 chr17 36335892 36335954 -49102526 - MIR3 SINE MIR -21 187 124 369 260 96 51 chr17 36335970 36336147 -49102333 + L2 LINE L2 3129 3313 0 2097 123 10 0 chr17 36336151 36336444 -49102036 + AluSx SINE Alu 1 296 -16 227 215 77 0 chr17 36336983 36337048 -49101432 + MIR SINE MIR 59 128 -80 786 180 7 0 chr17 36337695 36337834 -49100646 + FLAM_C SINE Alu 1 140 -3 527 108 10 0 chr17 36338545 36338647 -49099833 + (GA)n Simple_repeat Simple_repeat 1 103 0 300 293 49 24 chr17 36339386 36339509 -49098971 - MIR SINE MIR -48 214 89 2045 105 0 0 chr17 36339764 36340041 -49098439 + AluSx SINE Alu 27 303 -9 2290 85 3 13 chr17 36340041 36340356 -49098124 + AluSq SINE Alu 1 313 0 186 43 0 0 chr17 36340966 36340989 -49097491 + (A)n Simple_repeat Simple_repeat 1 23 0 238 180 33 49 chr17 36341053 36341114 -49097366 + MIR3 SINE MIR 116 175 -33 1647 159 69 3 chr17 36341323 36341613 -49096867 - AluJb SINE Alu -3 309 1 2236 84 20 0 chr17 36342183 36342480 -49096000 + AluSx SINE Alu 1 303 -9 1063 132 23 87 chr17 36343264 36343483 -49094997 + AluJb SINE Alu 108 312 0 219 244 0 0 chr17 36343509 36343554 -49094926 + MIR SINE MIR 205 249 -13 1965 125 17 7 chr17 36343591 36343905 -49094575 - AluSx SINE Alu 0 312 1 229 286 0 78 chr17 36344889 36344966 -49093514 + L2 LINE L2 3200 3270 -2 27 29 0 0 chr17 36345230 36345264 -49093216 + AT_rich Low_complexity Low_complexity 1 34 0 2023 116 16 13 chr17 36345272 36345583 -49092897 + AluSx SINE Alu 1 312 0 261 75 0 0 chr17 36345730 36345770 -49092710 + (GGATG)n Simple_repeat Simple_repeat 3 42 0 259 341 71 0 chr17 36346208 36346334 -49092146 + MIR SINE MIR 3 137 -125 205 235 39 0 chr17 36346371 36346422 -49092058 + MIR SINE MIR 138 190 -72 393 314 58 12 chr17 36347409 36347581 -49090899 + MIR SINE MIR 64 243 -19 1989 56 116 4 chr17 36347727 36347995 -49090485 + AluY SINE Alu 1 298 -13 1996 112 0 11 chr17 36348065 36348385 -49090095 + AluSx SINE Alu 1 317 0 1281 116 0 0 chr17 36348386 36348558 -49089922 + AluSg/x SINE Alu 135 306 -4 315 0 0 0 chr17 36349637 36349672 -49088808 + (CA)n Simple_repeat Simple_repeat 1 35 0 23 33 0 0 chr17 36351168 36351198 -49087282 + AT_rich Low_complexity Low_complexity 1 30 0 268 164 0 33 chr17 36351655 36351716 -49086764 + L2 LINE L2 3255 3313 0 242 268 171 12 chr17 36352527 36352646 -49085834 - MIR SINE MIR -63 145 33 645 27 0 0 chr17 36355365 36355438 -49083042 + tRNA-Cys-TGC tRNA tRNA 1 73 -2 210 71 0 0 chr17 36355516 36355544 -49082936 + (A)n Simple_repeat Simple_repeat 1 28 0 957 123 159 0 chr17 36355946 36356109 -49082371 - MER5A DNA MER1_type 0 189 1 629 41 0 0 chr17 36357011 36357084 -49081396 - tRNA-Cys-TGC tRNA tRNA -2 73 1 1930 82 0 79 chr17 36357234 36357552 -49080928 + AluSg SINE Alu 1 293 -17 1983 90 55 17 chr17 36357625 36357915 -49080565 - AluSg SINE Alu -9 301 1 207 0 0 0 chr17 36357925 36357948 -49080532 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2051 113 3 0 chr17 36358009 36358291 -49080189 - AluSp SINE Alu -30 283 1 319 58 0 186 chr17 36358403 36358489 -49079991 + AluSp/q SINE Alu 234 303 0 1686 138 56 0 chr17 36358491 36358795 -49079685 + L1MB1 LINE L1 5813 6133 -35 1595 167 89 11 chr17 36358797 36359079 -49079401 + AluJb SINE Alu 2 305 -7 244 238 0 48 chr17 36359080 36359143 -49079337 - L2 LINE L2 -679 2635 2576 2311 172 15 77 chr17 36359146 36359260 -49079220 - MLT1D LTR MaLR -2 503 384 2215 108 0 0 chr17 36359260 36359556 -49078924 + AluSg SINE Alu 1 296 -14 2311 172 15 77 chr17 36359556 36359977 -49078503 - MLT1D LTR MaLR -121 384 1 2085 129 3 0 chr17 36360020 36360331 -49078149 + AluSx SINE Alu 1 312 0 2111 131 0 3 chr17 36360332 36360644 -49077836 + AluSq SINE Alu 2 312 -1 2215 91 3 3 chr17 36360824 36361132 -49077348 + AluY SINE Alu 1 308 -3 509 340 127 0 chr17 36361133 36361401 -49077079 - L2 LINE L2 -1924 1390 1089 183 308 8 90 chr17 36361404 36361492 -49076988 - L2 LINE L2 -33 3280 3205 1969 120 24 0 chr17 36361492 36361784 -49076696 + AluSx SINE Alu 1 299 -13 183 308 8 90 chr17 36361784 36361828 -49076652 - L2 LINE L2 -108 3205 3159 2336 60 7 0 chr17 36361838 36362139 -49076341 + AluSp SINE Alu 1 303 -10 2011 92 3 19 chr17 36362374 36362688 -49075792 + AluY SINE Alu 1 309 -2 593 54 0 14 chr17 36362966 36363040 -49075440 + tRNA-Cys-TGC tRNA tRNA 1 73 -2 2116 107 7 0 chr17 36363310 36363601 -49074879 - AluSx SINE Alu -19 293 1 2225 52 0 45 chr17 36363617 36363927 -49074553 - AluY SINE Alu -15 296 1 835 208 63 53 chr17 36363948 36364207 -49074273 + Charlie1b DNA MER1_type 44 310 -2451 1434 178 87 8 chr17 36364207 36364492 -49073988 - AluJb SINE Alu 0 306 1 835 208 63 53 chr17 36364492 36364548 -49073932 + Charlie1b DNA MER1_type 310 364 -159 28 71 0 0 chr17 36364671 36364727 -49073753 + GC_rich Low_complexity Low_complexity 1 56 0 1923 129 0 37 chr17 36365008 36365325 -49073155 - AluSq SINE Alu 0 306 1 1197 195 70 79 chr17 36365423 36365461 -49073019 - Charlie1b DNA MER1_type -2240 521 484 2284 101 0 7 chr17 36365461 36365769 -49072711 - AluSx SINE Alu -6 306 1 2111 108 3 0 chr17 36365770 36366065 -49072415 - AluSp SINE Alu -17 296 1 1197 195 70 79 chr17 36366065 36366245 -49072235 - Charlie1b DNA MER1_type -2277 484 304 1530 150 87 0 chr17 36366245 36366519 -49071961 + AluJb SINE Alu 11 306 0 1197 195 70 79 chr17 36366519 36366777 -49071703 - Charlie1b DNA MER1_type -2457 304 44 2182 56 7 36 chr17 36366798 36367102 -49071378 + AluY SINE Alu 1 295 -16 1551 104 0 9 chr17 36367118 36367339 -49071141 + AluSp SINE Alu 1 219 -94 279 213 28 46 chr17 36367810 36367918 -49070562 + (CGGGG)n Simple_repeat Simple_repeat 4 109 0 25 0 0 0 chr17 36368011 36368036 -49070444 + GC_rich Low_complexity Low_complexity 1 25 0 197 283 67 42 chr17 36368826 36368946 -49069534 + L3 LINE CR1 1188 1310 -267 247 302 0 0 chr17 36369850 36369913 -49068567 - MIR SINE MIR -61 147 85 1232 142 19 52 chr17 36371108 36371293 -49067187 - L1M4 LINE L1 -567 5617 5442 2185 112 3 0 chr17 36371293 36371596 -49066884 - AluSx SINE Alu -8 304 1 1232 142 19 52 chr17 36371596 36371677 -49066803 - L1M4 LINE L1 -742 5442 5360 2101 137 0 0 chr17 36371678 36371984 -49066496 - AluSx SINE Alu -6 306 1 811 142 0 0 chr17 36371990 36372117 -49066363 - FLAM_C SINE Alu -5 138 12 1288 136 24 93 chr17 36372129 36372322 -49066158 - L1M4 LINE L1 -776 5370 5214 2471 97 0 0 chr17 36372322 36372633 -49065847 - AluSx SINE Alu -1 311 1 1288 136 24 93 chr17 36372633 36372815 -49065665 - L1M4 LINE L1 -932 5214 5021 464 144 0 22 chr17 36372816 36372906 -49065574 - FLAM_C SINE Alu -2 141 54 385 180 3 20 chr17 36372932 36372955 -49065525 - L1 LINE L1 -1086 5060 5038 2159 168 54 5 chr17 36372955 36373396 -49065084 - L1MB1 LINE L1 -1 6167 5705 385 180 3 20 chr17 36373396 36373493 -49064987 - L1 LINE L1 -1108 5038 4940 2022 148 0 3 chr17 36373548 36373852 -49064628 - AluJb SINE Alu 0 312 10 2461 82 3 0 chr17 36373906 36374210 -49064270 + AluSx SINE Alu 1 305 -7 2408 88 0 0 chr17 36374221 36374516 -49063964 + AluSx SINE Alu 1 295 -17 335 137 41 41 chr17 36374954 36375027 -49063453 - L1MB1 LINE L1 -317 5851 5779 1402 190 21 4 chr17 36375040 36375282 -49063198 + AluJb SINE Alu 35 280 -32 252 0 0 0 chr17 36375282 36375310 -49063170 + (CAAT)n Simple_repeat Simple_repeat 4 31 0 2346 77 0 23 chr17 36375354 36375654 -49062826 - AluY SINE Alu -18 293 1 1463 163 90 10 chr17 36375664 36375953 -49062527 - AluJo SINE Alu 0 312 1 1224 83 12 153 chr17 36376725 36376979 -49061501 - AluY SINE Alu -1 310 93 1345 135 8 81 chr17 36376998 36377257 -49061223 - AluJb SINE Alu -33 279 40 2356 64 3 41 chr17 36377972 36378286 -49060194 - AluY SINE Alu -9 302 1 939 181 0 0 chr17 36378296 36378451 -49060029 - AluSg/x SINE Alu 0 312 158 764 128 0 0 chr17 36378451 36378560 -49059920 - AluJb SINE Alu -197 115 7 718 208 6 6 chr17 36378679 36378838 -49059642 - AluSg/x SINE Alu 0 310 152 367 324 28 0 chr17 36379703 36379848 -49058632 - MIR SINE MIR -112 150 2 2275 119 0 3 chr17 36379882 36380194 -49058286 - AluSq SINE Alu -2 311 1 349 191 0 29 chr17 36380626 36380694 -49057786 - AluYb8 SINE Alu -6 302 237 554 94 35 0 chr17 36380697 36380782 -49057698 + AluS SINE Alu 4 91 -221 2176 121 0 29 chr17 36383274 36383588 -49054892 - AluSx SINE Alu -7 305 1 220 208 0 0 chr17 36383983 36384036 -49054444 + A-rich Low_complexity Low_complexity 2 54 0 411 83 0 0 chr17 36384742 36384802 -49053678 + (CA)n Simple_repeat Simple_repeat 2 61 0 216 0 0 0 chr17 36386882 36386906 -49051574 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 1825 132 40 4 chr17 36386908 36387181 -49051299 - AluSx SINE Alu -29 283 1 2355 73 7 10 chr17 36387665 36387966 -49050514 - AluSp SINE Alu -13 300 1 1010 114 0 0 chr17 36387990 36388121 -49050359 - AluSg SINE Alu -179 131 1 434 198 47 0 chr17 36388123 36388209 -49050271 - AluJ/FLAM SINE Alu -222 90 1 222 333 61 10 chr17 36388352 36388451 -49050029 - L2 LINE L2 0 3272 3169 368 218 127 9 chr17 36388776 36388886 -49049594 + L2 LINE L2 3191 3313 0 213 336 34 34 chr17 36389230 36389438 -49049042 - L2 LINE L2 -1066 2248 2041 410 63 0 16 chr17 36389762 36389825 -49048655 + (TG)n Simple_repeat Simple_repeat 2 63 0 2255 106 0 3 chr17 36389879 36390172 -49048308 + AluSx SINE Alu 1 292 -20 1672 171 0 4 chr17 36390200 36390457 -49048023 + AluJb SINE Alu 34 289 -23 1071 101 0 7 chr17 36390492 36390630 -49047850 + AluSq/x SINE Alu 1 137 -175 2290 59 0 56 chr17 36391849 36392173 -49046307 - AluY SINE Alu -5 306 1 268 350 31 38 chr17 36394042 36394202 -49044278 - L3b LINE CR1 -11 1572 1414 2356 93 0 26 chr17 36394470 36394780 -49043700 + AluSx SINE Alu 1 302 -10 311 146 55 82 chr17 36394857 36394892 -49043588 + HAL1 LINE L1 1231 1265 -1242 1647 153 17 49 chr17 36394892 36395179 -49043301 + AluJo SINE Alu 2 279 -33 311 146 55 82 chr17 36395179 36395253 -49043227 + HAL1 LINE L1 1265 1337 -1170 316 254 11 103 chr17 36395256 36395441 -49043039 + HAL1 LINE L1 2035 2202 -305 931 129 0 14 chr17 36395530 36395669 -49042811 + AluSq/x SINE Alu 1 137 -176 2208 86 10 42 chr17 36395669 36395982 -49042498 + AluSx SINE Alu 1 303 -9 2146 105 0 42 chr17 36396361 36396674 -49041806 - AluSp SINE Alu -13 300 1 1005 147 6 0 chr17 36396956 36397113 -49041367 + FRAM SINE Alu 1 158 -8 367 168 0 15 chr17 36397122 36397196 -49041284 + AluJb SINE Alu 67 126 -176 808 86 18 0 chr17 36397207 36397330 -49041150 - L1MC/D LINE L1 -596 5588 5468 2247 125 3 0 chr17 36397344 36397649 -49040831 + AluSx SINE Alu 4 309 -3 2522 64 0 22 chr17 36397679 36397990 -49040490 + AluY SINE Alu 1 304 -7 1324 158 77 35 chr17 36398458 36398495 -49039985 + MLT1J LTR MaLR 6 40 -471 2031 141 13 0 chr17 36398495 36398794 -49039686 - AluSx SINE Alu -9 303 1 1324 158 77 35 chr17 36398794 36399167 -49039313 + MLT1J LTR MaLR 40 485 -26 1242 173 0 5 chr17 36399400 36399591 -49038889 - AluJ SINE Alu -12 300 111 318 208 0 0 chr17 36399602 36399655 -49038825 + L1MC4 LINE L1 6650 6702 -1340 370 322 0 0 chr17 36399662 36399752 -49038728 - L1MC4 LINE L1 -1339 6703 6614 837 103 0 26 chr17 36399755 36399872 -49038608 - AluJ SINE Alu -186 126 13 969 144 0 13 chr17 36399884 36400037 -49038443 - FRAM SINE Alu -11 165 15 1965 141 0 10 chr17 36400041 36400332 -49038148 - AluSq SINE Alu -20 293 6 207 173 0 39 chr17 36400344 36400396 -49038084 + T-rich Low_complexity Low_complexity 6 55 0 805 107 149 20 chr17 36400419 36400431 -49038049 - L1MB3 LINE L1 0 6184 6175 2000 90 83 42 chr17 36400431 36400720 -49037760 - AluSx SINE Alu -11 301 1 805 107 149 20 chr17 36400720 36400882 -49037598 - L1MB3 LINE L1 -9 6175 6007 2287 101 0 13 chr17 36400883 36401189 -49037291 + AluSx SINE Alu 1 302 -10 2025 129 0 37 chr17 36401327 36401648 -49036832 + AluSq SINE Alu 1 310 0 2008 125 10 16 chr17 36401889 36402201 -49036279 - AluSx SINE Alu -2 310 1 1786 235 85 16 chr17 36402439 36402834 -49035646 + L2 LINE L2 2389 2830 -484 1937 121 7 14 chr17 36402834 36403116 -49035364 - AluSx SINE Alu -23 289 10 1786 235 85 16 chr17 36403116 36403235 -49035245 + L2 LINE L2 2830 2939 -375 1371 183 55 26 chr17 36403245 36403369 -49035111 - AluJo SINE Alu -29 283 164 180 0 0 0 chr17 36403369 36403389 -49035091 + (TTTTA)n Simple_repeat Simple_repeat 1 20 0 1947 133 0 14 chr17 36403389 36403674 -49034806 - AluSx SINE Alu -31 281 1 1371 183 55 26 chr17 36403674 36403821 -49034659 - AluJo SINE Alu -147 165 3 1914 125 10 14 chr17 36403836 36404125 -49034355 - AluSx SINE Alu -14 298 11 335 191 0 0 chr17 36404125 36404188 -49034292 - AluSg/x SINE Alu -156 144 82 1209 145 9 53 chr17 36404188 36404278 -49034202 - AluSx SINE Alu -94 218 126 2076 70 3 44 chr17 36404278 36404600 -49033880 - AluSp SINE Alu 0 310 1 1209 145 9 53 chr17 36404600 36404736 -49033744 - AluSx SINE Alu -186 126 1 230 232 0 0 chr17 36404754 36404823 -49033657 + (TA)n Simple_repeat Simple_repeat 2 70 0 230 51 51 0 chr17 36404824 36404863 -49033617 + (TAGA)n Simple_repeat Simple_repeat 2 42 0 718 70 0 0 chr17 36404869 36404969 -49033511 + AluSp/q SINE Alu 213 312 -1 2273 73 0 7 chr17 36405520 36405807 -49032673 - AluSg SINE Alu -25 285 1 236 27 0 54 chr17 36405820 36405857 -49032623 - U2 snRNA snRNA -153 35 1 516 184 22 140 chr17 36405861 36406089 -49032391 + L2 LINE L2 3113 3313 0 2163 103 7 13 chr17 36406148 36406449 -49032031 + AluSx SINE Alu 1 299 -13 551 95 0 63 chr17 36408321 36408451 -49030029 - AluSg/x SINE Alu 0 309 199 1161 124 12 0 chr17 36408495 36408664 -49029816 - AluSg/x SINE Alu -10 300 130 547 200 22 30 chr17 36410004 36410139 -49028341 + AluJb SINE Alu 70 203 -109 216 0 0 0 chr17 36410491 36410515 -49027965 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 1138 155 11 6 chr17 36410685 36410859 -49027621 - AluSq SINE Alu -96 217 43 1678 130 52 26 chr17 36411106 36411376 -49027104 + AluSg SINE Alu 1 277 -33 479 217 101 8 chr17 36412035 36412164 -49026316 + MER5B DNA MER1_type 35 175 -3 1842 150 25 0 chr17 36412215 36412501 -49025979 + AluSx SINE Alu 3 295 -17 553 282 35 6 chr17 36412670 36412844 -49025636 - AluJo SINE Alu -19 293 115 1755 106 4 0 chr17 36412905 36413131 -49025349 + AluSx SINE Alu 1 227 -85 1135 100 0 0 chr17 36413192 36413342 -49025138 - AluSq SINE Alu -43 270 121 2384 82 6 13 chr17 36413345 36413660 -49024820 - AluSp SINE Alu 0 313 1 269 208 0 11 chr17 36413828 36413901 -49024579 + AluSp SINE Alu 121 186 -117 966 168 62 0 chr17 36413928 36414089 -49024391 + FRAM SINE Alu 1 162 -14 2340 87 7 7 chr17 36414091 36414389 -49024091 + AluY SINE Alu 1 298 -13 2221 121 0 3 chr17 36414399 36414697 -49023783 + AluSq SINE Alu 1 297 -16 2302 117 3 0 chr17 36414697 36415005 -49023475 + AluSq SINE Alu 4 312 -1 2435 87 0 13 chr17 36415020 36415154 -49023326 + AluSg SINE Alu 1 135 -175 2460 67 0 10 chr17 36415154 36415454 -49023026 + AluY SINE Alu 1 297 -14 2435 87 0 13 chr17 36415454 36415629 -49022851 + AluSg SINE Alu 135 306 -4 1060 150 53 0 chr17 36415658 36415845 -49022635 + AluSg/x SINE Alu 106 302 -8 1666 198 3 0 chr17 36415977 36416275 -49022205 + AluSq SINE Alu 1 299 -14 896 116 0 22 chr17 36416311 36416449 -49022031 + AluSq/x SINE Alu 2 136 -176 1364 128 202 8 chr17 36416449 36416692 -49021788 + AluSg1 SINE Alu 16 305 -4 2573 60 3 0 chr17 36416705 36417005 -49021475 + AluSp SINE Alu 1 301 -12 2244 97 21 0 chr17 36417015 36417305 -49021175 + AluSx SINE Alu 1 296 -16 812 152 0 0 chr17 36417306 36417438 -49021042 + AluSg/x SINE Alu 132 263 -47 273 161 49 0 chr17 36417446 36417527 -49020953 + (TA)n Simple_repeat Simple_repeat 2 86 0 2113 124 0 0 chr17 36417530 36417812 -49020668 + AluSx SINE Alu 1 282 -30 917 18 9 0 chr17 36417812 36417923 -49020557 + (TAGA)n Simple_repeat Simple_repeat 1 112 0 2159 97 0 4 chr17 36417935 36418254 -49020226 + AluSg1 SINE Alu 3 320 0 2523 35 11 0 chr17 36418328 36418615 -49019865 - AluY SINE Alu -21 290 1 1438 166 90 10 chr17 36418624 36418913 -49019567 - AluJo SINE Alu 0 312 1 1211 87 12 153 chr17 36419685 36419939 -49018541 - AluY SINE Alu -1 310 93 1321 133 8 95 chr17 36419958 36420221 -49018259 - AluJb SINE Alu -33 279 40 2356 64 3 41 chr17 36420938 36421252 -49017228 - AluY SINE Alu -9 302 1 939 181 0 0 chr17 36421261 36421416 -49017064 - AluSg/x SINE Alu 0 310 156 764 128 0 0 chr17 36421416 36421525 -49016955 - AluJb SINE Alu -197 115 7 2458 102 0 3 chr17 36421643 36421956 -49016524 - AluSx SINE Alu 0 312 1 1014 132 40 7 chr17 36421974 36422126 -49016354 - FRAM SINE Alu -19 157 1 217 0 0 0 chr17 36422134 36422158 -49016322 + (TTTTA)n Simple_repeat Simple_repeat 2 75 0 1944 123 0 0 chr17 36422158 36422418 -49016062 - AluSx SINE Alu -29 283 24 22 35 0 0 chr17 36422436 36422465 -49016015 + AT_rich Low_complexity Low_complexity 1 29 0 626 281 130 0 chr17 36422502 36422576 -49015904 - MIR SINE MIR 0 262 199 2118 105 21 0 chr17 36422576 36422862 -49015618 + AluSx SINE Alu 1 292 -20 626 281 130 0 chr17 36422862 36423018 -49015462 - MIR SINE MIR -63 199 2 2300 115 0 3 chr17 36423052 36423364 -49015116 - AluSq SINE Alu -2 311 1 349 191 0 29 chr17 36423796 36423864 -49014616 - AluYb8 SINE Alu -6 302 237 2386 92 3 16 chr17 36423864 36424180 -49014300 + AluSx SINE Alu 1 312 0 1499 188 4 0 chr17 36424189 36424428 -49014052 - AluJb SINE Alu -60 252 13 2419 83 0 3 chr17 36424545 36424845 -49013635 + AluSg SINE Alu 1 299 -11 2551 53 7 3 chr17 36425951 36426250 -49012230 + AluY SINE Alu 1 300 -11 806 138 0 65 chr17 36426259 36426397 -49012083 + FLAM_C SINE Alu 1 129 -14 284 187 0 27 chr17 36426417 36426492 -49011988 + (TATATG)n Simple_repeat Simple_repeat 2 74 0 1919 92 52 15 chr17 36426509 36426781 -49011699 - AluSx SINE Alu -30 282 1 540 95 0 0 chr17 36426965 36427039 -49011441 + tRNA-Cys-TGC tRNA tRNA 1 74 -1 2365 74 3 7 chr17 36427375 36427671 -49010809 + AluSg SINE Alu 1 295 -15 1787 86 0 5 chr17 36427670 36427892 -49010588 + AluSg/x SINE Alu 74 294 -16 * 2483 75 13 0 chr17 36427892 36428199 -49010281 + AluY SINE Alu 1 311 0 370 324 158 27 chr17 36428204 36428328 -49010152 + HAL1 LINE L1 880 986 -1521 2031 114 45 0 chr17 36428328 36428617 -49009863 + AluSq SINE Alu 2 303 -10 2545 74 3 3 chr17 36428619 36428930 -49009550 + AluY SINE Alu 1 311 0 370 324 158 27 chr17 36428930 36429176 -49009304 + HAL1 LINE L1 986 1302 -1205 198 103 0 0 chr17 36429176 36429205 -49009275 + (GGAA)n Simple_repeat Simple_repeat 1 29 0 1969 66 117 12 chr17 36429216 36429502 -49008978 + AluY SINE Alu 1 313 0 1973 147 3 23 chr17 36429572 36429879 -49008601 - AluJo SINE Alu -11 301 1 240 250 157 19 chr17 36429893 36430001 -49008479 - MER113 DNA MER1_type? -3 518 396 964 185 0 19 chr17 36430031 36430188 -49008292 - FRAM SINE Alu -22 154 1 281 143 0 0 chr17 36430222 36430264 -49008216 + Alu SINE Alu 1 42 -261 484 233 10 0 chr17 36430327 36430430 -49008050 + FLAM_A SINE Alu 8 111 -31 2447 74 0 7 chr17 36430500 36430797 -49007683 + AluSc SINE Alu 1 295 -14 2664 141 15 93 chr17 36430842 36431193 -49007287 - L1MB8 LINE L1 -1 6177 5800 2181 107 3 0 chr17 36431193 36431483 -49006997 - AluY SINE Alu -10 301 11 2664 141 15 93 chr17 36431483 36431599 -49006881 - L1MB8 LINE L1 -378 5800 5677 1506 173 71 42 chr17 36431599 36431882 -49006598 - AluSx SINE Alu -21 291 1 2664 141 15 93 chr17 36431882 36431942 -49006538 - L1MB8 LINE L1 -501 5677 5708 2209 122 0 7 chr17 36431942 36432246 -49006234 + AluSx SINE Alu 1 302 -10 2664 141 15 93 chr17 36432246 36432381 -49006099 - L1MB8 LINE L1 -469 5709 5565 879 170 0 0 chr17 36432396 36432537 -49005943 - FLAM_C SINE Alu -2 141 1 30 0 0 0 chr17 36432545 36432575 -49005905 + AT_rich Low_complexity Low_complexity 1 30 0 2186 108 3 7 chr17 36432576 36432862 -49005618 - AluSx SINE Alu -27 285 1 1916 140 7 0 chr17 36432865 36433143 -49005337 - AluJb SINE Alu -19 293 14 2501 80 3 3 chr17 36433205 36433516 -49004964 - AluSp SINE Alu -2 311 1 2232 113 3 13 chr17 36433518 36433828 -49004652 - AluSq SINE Alu -4 309 3 491 227 26 83 chr17 36433843 36433989 -49004491 + L1M4 LINE L1 4255 4387 -1759 2027 114 0 0 chr17 36433989 36434311 -49004169 + AluSx SINE Alu 21 342 0 491 227 26 83 chr17 36434311 36434391 -49004089 + L1M4 LINE L1 4387 4470 -1676 932 145 0 21 chr17 36434391 36434522 -49003958 + FLAM_C SINE Alu 1 130 -182 1830 113 79 10 chr17 36434522 36434814 -49003666 + AluSq SINE Alu 1 312 -1 932 145 0 21 chr17 36434814 36434827 -49003653 + FLAM_C SINE Alu 130 142 -170 2387 70 17 0 chr17 36436055 36436354 -49002126 - AluSp SINE Alu -9 304 1 881 151 26 116 chr17 36436764 36436996 -49001484 - MER20 DNA MER1_type 0 219 9 249 291 13 0 chr17 36436998 36437099 -49001381 + GA-rich Low_complexity Low_complexity 1 102 0 2402 87 3 10 chr17 36437302 36437611 -49000869 + AluSg SINE Alu 1 307 -3 2297 70 49 7 chr17 36437621 36437908 -49000572 + AluY SINE Alu 1 299 -12 240 88 0 0 chr17 36437908 36437942 -49000538 + Alu SINE Alu 134 167 -136 2294 105 3 0 chr17 36438397 36438691 -48999789 + AluSp SINE Alu 2 296 -17 2012 111 38 3 chr17 36438691 36438980 -48999500 + AluSg SINE Alu 1 299 -11 2139 118 13 7 chr17 36439174 36439480 -48999000 - AluSx SINE Alu -4 308 1 404 317 92 26 chr17 36439936 36440163 -48998317 + MIR SINE MIR 6 247 -15 1676 178 25 4 chr17 36440530 36440656 -48997824 + AluJo SINE Alu 1 123 -191 1912 153 22 35 chr17 36440656 36440787 -48997693 + AluSx SINE Alu 1 132 -180 2253 101 37 0 chr17 36440787 36441084 -48997396 + AluSx SINE Alu 1 308 -4 2221 105 7 16 chr17 36441088 36441392 -48997088 + AluSx SINE Alu 1 301 -11 1912 153 22 35 chr17 36441392 36441568 -48996912 + AluSx SINE Alu 135 309 -3 1676 178 25 4 chr17 36441568 36441749 -48996731 + AluJo SINE Alu 123 314 0 2599 52 13 0 chr17 36442141 36442447 -48996033 - AluY SINE Alu -1 310 1 2343 117 0 0 chr17 36442454 36442763 -48995717 - AluSg SINE Alu -1 309 1 185 0 0 39 chr17 36442763 36442789 -48995691 + (TTA)n Simple_repeat Simple_repeat 2 26 0 2165 99 0 20 chr17 36442789 36442941 -48995539 - AluSx SINE Alu -26 286 132 222 37 0 0 chr17 36442941 36442968 -48995512 + (TTA)n Simple_repeat Simple_repeat 2 28 0 2198 113 0 0 chr17 36442968 36443252 -48995228 - AluSc SINE Alu -25 284 1 2165 99 0 20 chr17 36443252 36443390 -48995090 - AluSx SINE Alu -178 134 1 2107 137 0 3 chr17 36443400 36443700 -48994780 - AluSg SINE Alu -11 299 1 2059 130 7 3 chr17 36443777 36444070 -48994410 + AluSg SINE Alu 1 294 -16 1927 142 16 26 chr17 36444207 36444516 -48993964 + AluJo SINE Alu 1 306 -6 2037 110 18 4 chr17 36445187 36445479 -48993001 - AluSx SINE Alu 0 302 7 2518 58 0 19 chr17 36445991 36446300 -48992180 - AluY SINE Alu -8 303 1 1255 64 19 0 chr17 36446329 36446485 -48991995 + AluYa5 SINE Alu 151 309 -2 460 222 0 0 chr17 36446497 36446596 -48991884 - L1MB3 LINE L1 -78 6105 6007 2491 81 0 0 chr17 36446598 36446907 -48991573 + AluY SINE Alu 1 309 -2 1840 166 0 0 chr17 36446915 36447192 -48991288 + AluJb SINE Alu 1 277 -35 2079 125 0 50 chr17 36447263 36447584 -48990896 - AluSx SINE Alu -7 305 1 1146 92 0 114 chr17 36447599 36447783 -48990697 - AluSg/x SINE Alu -17 293 131 1691 85 5 0 chr17 36448118 36448330 -48990150 - AluSp SINE Alu -17 296 84 2370 88 7 0 chr17 36448522 36448819 -48989661 + AluSp SINE Alu 1 299 -14 2355 84 0 26 chr17 36449197 36449505 -48988975 - AluY SINE Alu -9 302 3 2227 112 0 16 chr17 36449507 36449810 -48988670 - AluSg SINE Alu -12 298 1 2099 124 7 10 chr17 36449817 36450115 -48988365 - AluSx SINE Alu -9 303 7 252 149 0 0 chr17 36450181 36450228 -48988252 + (GAA)n Simple_repeat Simple_repeat 2 48 0 335 325 68 0 chr17 36450341 36450458 -48988022 - L2 LINE L2 0 3272 3148 2551 66 3 0 chr17 36451309 36451613 -48986867 - AluSx SINE Alu -7 305 1 420 208 139 0 chr17 36451658 36451759 -48986721 - FLAM_A SINE Alu -7 135 21 1428 97 0 31 chr17 36451786 36451962 -48986518 - AluSp SINE Alu -4 309 138 2126 134 3 0 chr17 36451962 36452260 -48986220 - AluSp SINE Alu -14 299 1 1428 97 0 31 chr17 36452260 36452279 -48986201 - AluSp SINE Alu -175 138 120 2359 102 3 0 chr17 36452353 36452656 -48985824 - AluSg SINE Alu -6 304 1 2408 94 10 3 chr17 36452673 36452982 -48985498 - AluY SINE Alu 0 311 1 1795 184 3 0 chr17 36452985 36453284 -48985196 - AluJo SINE Alu -12 300 1 2558 71 0 3 chr17 36453411 36453719 -48984761 - AluSx SINE Alu -5 307 1 2064 146 3 0 chr17 36454647 36454942 -48983538 + AluSx SINE Alu 1 296 -16 727 248 0 12 chr17 36454950 36455111 -48983369 + AluJo SINE Alu 127 285 -27 853 161 0 0 chr17 36455147 36455271 -48983209 + FLAM_C SINE Alu 3 126 -17 506 293 33 87 chr17 36455302 36455455 -48983025 - HAL1 LINE L1 -72 2435 2275 1980 155 0 37 chr17 36455455 36455633 -48982847 - AluSx SINE Alu -1 311 128 2460 90 0 0 chr17 36455633 36455932 -48982548 - AluSp SINE Alu -12 301 3 2315 81 27 3 chr17 36455938 36456234 -48982246 - AluSx SINE Alu -9 303 1 1980 155 0 37 chr17 36456234 36456371 -48982109 - AluSx SINE Alu -189 123 1 506 293 33 87 chr17 36456371 36456641 -48981839 - HAL1 LINE L1 -232 2275 2035 341 147 55 73 chr17 36456644 36456717 -48981763 - HAL1 LINE L1 -1170 1337 1265 1669 154 18 42 chr17 36456717 36457002 -48981478 - AluJo SINE Alu -33 279 2 341 147 55 73 chr17 36457002 36457037 -48981443 - HAL1 LINE L1 -1242 1265 1231 2445 84 0 0 chr17 36457114 36457411 -48981069 - AluSx SINE Alu -15 297 1 259 338 45 32 chr17 36457679 36457836 -48980644 + L3b LINE CR1 1414 1572 -11 2581 58 0 7 chr17 36459674 36459982 -48978498 + AluY SINE Alu 1 306 -5 266 209 29 48 chr17 36461106 36461213 -48977267 + (CGGGG)n Simple_repeat Simple_repeat 1 104 0 25 0 0 0 chr17 36461309 36461334 -48977146 + GC_rich Low_complexity Low_complexity 1 25 0 203 250 75 50 chr17 36462134 36462254 -48976226 + L3 LINE CR1 1188 1310 -267 236 302 0 0 chr17 36463158 36463221 -48975259 - MIR SINE MIR -61 147 85 1324 142 19 52 chr17 36464414 36464599 -48973881 - L1M4 LINE L1 -567 5617 5442 2264 116 3 0 chr17 36464599 36464902 -48973578 - AluSx SINE Alu -8 304 1 1324 142 19 52 chr17 36464902 36464983 -48973497 - L1M4 LINE L1 -742 5442 5360 2198 137 0 0 chr17 36464984 36465290 -48973190 - AluSx SINE Alu -6 306 1 839 142 0 0 chr17 36465296 36465423 -48973057 - FLAM_C SINE Alu -5 138 12 1389 127 26 98 chr17 36465435 36465629 -48972851 - L1M4 LINE L1 -776 5370 5214 2482 96 0 0 chr17 36465629 36465941 -48972539 - AluSx SINE Alu 0 312 1 1389 127 26 98 chr17 36465941 36466123 -48972357 - L1M4 LINE L1 -932 5214 5021 400 165 0 22 chr17 36466124 36466215 -48972265 - FLAM_C SINE Alu -1 142 54 385 180 3 20 chr17 36466241 36466264 -48972216 - L1 LINE L1 -1086 5060 5038 2141 170 54 5 chr17 36466264 36466705 -48971775 - L1MB1 LINE L1 -1 6167 5705 385 180 3 20 chr17 36466705 36466802 -48971678 - L1 LINE L1 -1108 5038 4940 2022 148 0 3 chr17 36466857 36467161 -48971319 - AluJb SINE Alu 0 312 10 2461 82 3 0 chr17 36467215 36467519 -48970961 + AluSx SINE Alu 1 305 -7 2422 85 0 0 chr17 36467530 36467825 -48970655 + AluSx SINE Alu 1 295 -17 335 137 41 41 chr17 36468263 36468336 -48970144 - L1MB1 LINE L1 -317 5851 5779 1443 187 20 4 chr17 36468349 36468595 -48969885 + AluJb SINE Alu 35 284 -28 2334 80 0 23 chr17 36468651 36468951 -48969529 - AluY SINE Alu -18 293 1 181 304 89 0 chr17 36468958 36469037 -48969443 + L2 LINE L2 3182 3267 -5 2418 80 26 0 chr17 36469050 36469352 -48969128 + AluSp SINE Alu 1 310 -3 315 275 9 28 chr17 36469362 36469471 -48969009 - L2 LINE L2 -494 2820 2714 2211 111 0 0 chr17 36470002 36470281 -48968199 + AluSg SINE Alu 1 279 -31 494 113 0 0 chr17 36470282 36470353 -48968127 - AluS SINE Alu -239 72 2 423 252 7 22 chr17 36470626 36470642 -48967838 - L1MA10 LINE L1 -4 6330 6315 967 201 57 38 chr17 36470642 36470905 -48967575 - L1ME2 LINE L1 -9 6155 5888 1726 163 13 48 chr17 36471619 36471798 -48966682 - AluJo SINE Alu -10 302 137 1807 115 32 8 chr17 36471798 36472051 -48966429 - AluSq SINE Alu -15 298 40 1726 163 13 48 chr17 36472051 36472184 -48966296 - AluJo SINE Alu -175 137 1 2328 82 0 0 chr17 36472259 36472539 -48965941 + AluY SINE Alu 1 280 -31 379 0 0 0 chr17 36472539 36472581 -48965899 + (TAAA)n Simple_repeat Simple_repeat 4 168 0 206 279 0 44 chr17 36472747 36472815 -48965665 - L2 LINE L2 -2 3311 3247 2188 118 0 13 chr17 36472861 36473176 -48965304 + AluSq SINE Alu 1 311 -2 227 241 19 0 chr17 36473308 36473362 -48965118 - L2 LINE L2 -208 3064 3010 1462 188 83 0 chr17 36473446 36473722 -48964758 + AluJo SINE Alu 1 299 -13 2168 89 6 22 chr17 36475053 36475369 -48963111 - AluSq SINE Alu -2 311 1 275 272 12 0 chr17 36475967 36476048 -48962432 - L1ME3A LINE L1 -9 6161 6080 259 282 261 7 chr17 36476057 36476199 -48962281 - MER5A DNA MER1_type -5 184 7 908 108 0 23 chr17 36476223 36476353 -48962127 + AluJo SINE Alu 1 127 -185 2129 113 3 3 chr17 36476862 36477164 -48961316 + AluSq SINE Alu 5 306 -7 2291 70 6 29 chr17 36477540 36477853 -48960627 - AluSq SINE Alu -7 306 1 1040 158 12 0 chr17 36478778 36478942 -48959538 + AluJo SINE Alu 133 298 -14 1914 149 0 0 chr17 36478942 36479238 -48959242 + AluJb SINE Alu 1 296 -16 278 302 75 4 chr17 36479713 36479835 -48958645 - MIR SINE MIR -31 177 48 310 311 52 121 chr17 36481775 36482254 -48956226 + L2 LINE L2 2826 3271 -1 1716 154 4 4 chr17 36483415 36483694 -48954786 + AluJo SINE Alu 22 300 -12 863 200 6 0 chr17 36483695 36483855 -48954625 + AluJb SINE Alu 134 294 -18 1023 108 12 30 chr17 36484101 36484267 -48954213 - AluSc SINE Alu 0 309 147 2299 139 26 55 chr17 36484267 36484489 -48953991 - L1MB3 LINE L1 -45 6138 5911 1965 97 64 17 chr17 36484489 36484787 -48953693 + AluSp SINE Alu 1 312 -1 2299 139 26 55 chr17 36484787 36484872 -48953608 - L1MB3 LINE L1 -272 5911 5825 2360 80 0 6 chr17 36484872 36485183 -48953297 - AluSc SINE Alu 0 309 1 2299 139 26 55 chr17 36485183 36485212 -48953268 - L1MB3 LINE L1 -358 5825 5797 1432 210 20 10 chr17 36485212 36485507 -48952973 + AluJo SINE Alu 1 298 -14 2295 61 0 14 chr17 36485507 36485795 -48952685 + AluY SINE Alu 1 286 -21 207 0 0 0 chr17 36485795 36485818 -48952662 + (CA)n Simple_repeat Simple_repeat 2 24 0 2299 139 26 55 chr17 36485822 36485887 -48952593 - L1MB3 LINE L1 -385 5798 5747 1510 206 46 90 chr17 36485887 36485961 -48952519 - MLT2D LTR ERVL 0 414 338 2449 68 0 6 chr17 36485961 36486272 -48952208 - AluY SINE Alu -2 309 1 1510 206 46 90 chr17 36486272 36486630 -48951850 - MLT2D LTR ERVL -76 338 1 2299 139 26 55 chr17 36486630 36486693 -48951787 - L1MB3 LINE L1 -436 5747 5684 185 363 12 0 chr17 36487282 36487362 -48951118 - MIR3 SINE MIR -31 177 97 333 215 224 0 chr17 36487548 36487655 -48950825 + MER112 DNA MER1_type 34 164 -96 674 101 0 73 chr17 36487658 36487767 -48950713 - Tigger7 DNA MER2_type 0 2587 2487 * 2702 155 45 23 chr17 36487744 36487878 -48950602 - Tigger7 DNA MER2_type -1961 526 396 2070 110 10 3 chr17 36487878 36488169 -48950311 + AluSx SINE Alu 1 293 -19 2702 155 45 23 chr17 36488169 36488549 -48949931 - Tigger7 DNA MER2_type -2091 396 1 233 323 21 0 chr17 36488549 36488636 -48949844 + MER112 DNA MER1_type 166 254 -6 1704 170 0 3 chr17 36488729 36489012 -48949468 - AluJo SINE Alu -30 282 1 637 102 31 0 chr17 36489187 36489285 -48949195 - AluJb SINE Alu -5 307 207 195 296 56 0 chr17 36489300 36489371 -48949109 + L2 LINE L2 3134 3208 -64 211 200 0 0 chr17 36489552 36489597 -48948883 + GA-rich Low_complexity Low_complexity 2 46 0 189 74 0 0 chr17 36493217 36493244 -48945236 + (TG)n Simple_repeat Simple_repeat 2 28 0 1601 166 64 0 chr17 36495260 36495543 -48942937 + AluJb SINE Alu 1 301 -11 21 0 0 0 chr17 36495608 36495629 -48942851 + GC_rich Low_complexity Low_complexity 1 21 0 766 162 221 0 chr17 36495738 36495892 -48942588 + MER5A DNA MER1_type 1 188 -1 428 282 74 0 chr17 36495940 36496089 -48942391 + MER5B DNA MER1_type 18 177 -1 355 326 154 0 chr17 36496205 36496380 -48942100 + MIR SINE MIR 49 250 -12 2386 69 0 7 chr17 36496957 36497261 -48941219 + AluSg SINE Alu 1 302 -8 2147 108 13 3 chr17 36497378 36497684 -48940796 - AluSx SINE Alu -3 309 1 304 252 39 58 chr17 36498554 36498657 -48939823 + MIR SINE MIR 53 153 -109 240 267 67 19 chr17 36498683 36498788 -48939692 + L2 LINE L2 2288 2397 -917 232 0 0 0 chr17 36499344 36499370 -48939110 + U6 snRNA snRNA 1 26 -81 2233 77 13 7 chr17 36499392 36499691 -48938789 - AluSp SINE Alu -12 301 1 345 295 50 14 chr17 36499691 36499830 -48938650 - MIR SINE MIR -79 183 40 2414 70 0 10 chr17 36500912 36501226 -48937254 + AluY SINE Alu 1 311 0 1498 197 45 3 chr17 36501262 36501552 -48936928 + Tigger5 DNA MER2_type 3 304 -2019 2151 75 7 0 chr17 36501692 36501994 -48936486 - AluY SINE Alu 0 304 1 1756 154 13 16 chr17 36502114 36502425 -48936055 + AluJo SINE Alu 1 310 -2 1352 116 11 0 chr17 36502805 36502994 -48935486 + AluSq SINE Alu 1 191 -122 1711 101 0 0 chr17 36502996 36503224 -48935256 - AluSc SINE Alu -81 228 1 2108 122 3 0 chr17 36503226 36503521 -48934959 - AluSx SINE Alu -15 297 2 1678 126 43 47 chr17 36503579 36503880 -48934600 + AluSx SINE Alu 2 301 -11 2057 127 10 0 chr17 36503966 36504265 -48934215 + AluSx SINE Alu 1 302 -10 557 100 110 70 chr17 36505026 36505042 -48933438 + U6 snRNA snRNA 1 15 -92 306 0 0 0 chr17 36505042 36505076 -48933404 + (CA)n Simple_repeat Simple_repeat 1 34 0 216 0 0 0 chr17 36505075 36505099 -48933381 + (TA)n Simple_repeat Simple_repeat 2 25 0 * 557 100 110 70 chr17 36505076 36505099 -48933381 + U6 snRNA snRNA 15 36 -71 2262 64 3 14 chr17 36505099 36505395 -48933085 - AluY SINE Alu -18 293 1 557 100 110 70 chr17 36505395 36505477 -48933003 + U6 snRNA snRNA 36 104 -3 1553 146 112 8 chr17 36505488 36505755 -48932725 + AluJo SINE Alu 1 295 -7 279 232 121 30 chr17 36505938 36506037 -48932443 - MIR3 SINE MIR -8 200 93 2177 122 0 0 chr17 36506259 36506571 -48931909 - AluSx SINE Alu 0 312 1 2221 110 0 0 chr17 36506980 36507279 -48931201 + AluSx SINE Alu 1 299 -13 210 242 129 0 chr17 36508358 36508420 -48930060 - L2 LINE L2 0 3313 3244 217 259 0 0 chr17 36508427 36508481 -48929999 + L2 LINE L2 3213 3266 -6 694 13 0 0 chr17 36508904 36508981 -48929499 + tRNA-Asn-AAC tRNA tRNA 1 77 0 191 53 0 79 chr17 36508986 36509024 -48929456 + (T)n Simple_repeat Simple_repeat 1 35 0 184 214 143 122 chr17 36510144 36510242 -48928238 + L2 LINE L2 3146 3245 -27 223 68 0 45 chr17 36512368 36512412 -48926068 + (TCCCC)n Simple_repeat Simple_repeat 2 43 0 223 89 0 44 chr17 36512492 36512537 -48925943 + (TCCC)n Simple_repeat Simple_repeat 1 43 0 27 62 0 0 chr17 36513147 36513195 -48925285 + GC_rich Low_complexity Low_complexity 1 48 0 465 211 108 72 chr17 36515104 36515226 -48923254 + MIR3 SINE MIR 23 154 -54 1944 128 7 13 chr17 36515226 36515402 -48923078 - AluSg1 SINE Alu -6 303 128 2226 81 0 7 chr17 36515402 36515698 -48922782 - AluSc SINE Alu -5 304 11 1944 128 7 13 chr17 36515698 36515826 -48922654 - AluSg1 SINE Alu -181 128 1 465 211 108 72 chr17 36515826 36515869 -48922611 + MIR3 SINE MIR 154 194 -14 2262 110 0 0 chr17 36516105 36516415 -48922065 + AluSx SINE Alu 3 312 0 1834 131 27 20 chr17 36517368 36517666 -48920814 + AluSx SINE Alu 1 300 -12 888 150 0 96 chr17 36519466 36519653 -48918827 - AluJb SINE Alu -8 304 136 2371 82 0 0 chr17 36519978 36520281 -48918199 - AluY SINE Alu -8 303 1 285 246 297 22 chr17 36522747 36522825 -48915655 - MER5A DNA MER1_type -6 183 128 2351 76 3 3 chr17 36522825 36523128 -48915352 - AluSg SINE Alu -7 303 1 285 246 297 22 chr17 36523128 36523187 -48915293 - MER5A DNA MER1_type -61 128 8 324 156 0 248 chr17 36523229 36523282 -48915198 + MER5B DNA MER1_type 70 134 -44 1821 159 27 0 chr17 36523282 36523578 -48914902 - AluSq SINE Alu -9 304 1 324 156 0 248 chr17 36523578 36523591 -48914889 + MER5B DNA MER1_type 134 148 -30 1709 116 89 20 chr17 36523591 36523884 -48914596 - AluSp SINE Alu 0 313 1 324 156 0 248 chr17 36523884 36523896 -48914584 + MER5B DNA MER1_type 148 161 -17 2515 58 0 0 chr17 36523896 36524206 -48914274 - AluY SINE Alu -1 310 1 324 156 0 248 chr17 36524206 36524266 -48914214 + MER5B DNA MER1_type 161 175 -3 26 0 0 0 chr17 36525656 36525682 -48912798 + AT_rich Low_complexity Low_complexity 1 26 0 223 250 19 0 chr17 36527563 36527615 -48910865 + MIR SINE MIR 3 55 -207 291 28 0 0 chr17 36527784 36527820 -48910660 + (TG)n Simple_repeat Simple_repeat 2 37 0 182 308 266 7 chr17 36527910 36528053 -48910427 + L3 LINE CR1 1295 1474 -103 210 188 213 75 chr17 36528054 36528115 -48910365 - MIR SINE MIR -79 129 53 1427 151 38 38 chr17 36528115 36528406 -48910074 - AluJb SINE Alu -21 291 1 210 188 213 75 chr17 36528406 36528424 -48910056 - MIR SINE MIR -155 53 39 1010 74 0 0 chr17 36528838 36528959 -48909521 + 5S rRNA rRNA 1 121 0 237 181 56 14 chr17 36530273 36530345 -48908135 + (CTGGGG)n Simple_repeat Simple_repeat 1 75 0 213 243 18 36 chr17 36530369 36530480 -48908000 + (CCCG)n Simple_repeat Simple_repeat 3 111 0 2232 92 27 0 chr17 36532943 36533238 -48905242 - AluSx SINE Alu -9 303 1 220 208 0 0 chr17 36533610 36533663 -48904817 + A-rich Low_complexity Low_complexity 2 54 0 411 83 0 0 chr17 36534352 36534412 -48904068 + (CA)n Simple_repeat Simple_repeat 2 61 0 219 88 0 0 chr17 36535868 36535902 -48902578 + (CTG)n Simple_repeat Simple_repeat 3 36 0 216 0 0 0 chr17 36536476 36536500 -48901980 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 1380 93 6 0 chr17 36536502 36536685 -48901795 - AluSg/x SINE Alu -29 281 98 300 345 90 28 chr17 36536692 36536717 -48901763 - L1MC4a LINE L1 -1550 6258 6236 2396 80 0 0 chr17 36536717 36537016 -48901464 + AluSq SINE Alu 2 300 -13 300 345 90 28 chr17 36537016 36537167 -48901313 - L1MC4a LINE L1 -1572 6236 6071 1801 144 36 13 chr17 36537233 36537538 -48900942 - AluJb SINE Alu 0 312 1 210 250 0 68 chr17 36538738 36538826 -48899654 + G-rich Low_complexity Low_complexity 5 86 0 264 277 27 54 chr17 36539173 36539285 -48899195 - MIR SINE MIR -104 158 50 * 568 326 79 9 chr17 36539244 36539471 -48899009 + MIR SINE MIR 20 262 0 253 246 31 0 chr17 36539482 36539547 -48898933 - MIR SINE MIR -110 98 32 377 291 198 17 chr17 36539642 36539879 -48898601 + L2 LINE L2 3032 3311 -2 223 203 0 34 chr17 36540411 36540470 -48898010 + G-rich Low_complexity Low_complexity 3 59 0 285 278 165 9 chr17 36542095 36542210 -48896270 + MIR SINE MIR 18 150 -58 314 152 35 44 chr17 36542277 36542370 -48896110 - 7SLRNA srpRNA srpRNA -6 314 252 2427 64 0 0 chr17 36542370 36542666 -48895814 - AluSq SINE Alu -17 296 1 314 152 35 44 chr17 36542666 36542687 -48895793 - 7SLRNA srpRNA srpRNA -68 252 232 294 269 90 64 chr17 36544468 36544712 -48893768 + MIR SINE MIR 20 258 -4 264 100 0 0 chr17 36544953 36544993 -48893487 + (GGA)n Simple_repeat Simple_repeat 2 41 0 270 372 71 10 chr17 36545602 36545798 -48892682 + L2 LINE L2 2871 3078 -194 2290 92 0 16 chr17 36545989 36546303 -48892177 - AluSq SINE Alu -4 309 1 730 236 28 6 chr17 36546477 36546655 -48891825 + MIR SINE MIR 16 197 -65 205 333 71 42 chr17 36549084 36549252 -48889228 - MIR3 SINE MIR -27 181 9 255 274 73 61 chr17 36549527 36549691 -48888789 + L2 LINE L2 1814 1979 -1335 735 197 0 8 chr17 36549921 36550053 -48888427 + MER94 DNA DNA 4 134 0 234 312 50 78 chr17 36550068 36550350 -48888130 + L2 LINE L2 2470 2743 -571 531 278 41 46 chr17 36550694 36550888 -48887592 + MIR SINE MIR 70 262 0 315 359 73 9 chr17 36550898 36551118 -48887362 + L2 LINE L2 3005 3238 -34 203 236 255 19 chr17 36551586 36551689 -48886791 + L2 LINE L2 3006 3083 -189 1023 208 19 33 chr17 36551689 36551834 -48886646 + MER3 DNA MER1_type 1 144 -65 2087 113 7 10 chr17 36551834 36552144 -48886336 - AluSx SINE Alu -3 309 1 1023 208 19 33 chr17 36552144 36552210 -48886270 + MER3 DNA MER1_type 144 209 0 203 236 255 19 chr17 36552210 36552263 -48886217 + L2 LINE L2 3083 3199 -73 644 288 120 54 chr17 36552274 36552642 -48885838 + L2 LINE L2 2922 3313 0 377 256 44 15 chr17 36553368 36553505 -48884975 + L1MC5 LINE L1 7785 7925 -36 47 33 0 0 chr17 36554946 36555007 -48883473 + GC_rich Low_complexity Low_complexity 1 61 0 230 111 0 79 chr17 36555145 36555208 -48883272 + (CGGGGG)n Simple_repeat Simple_repeat 3 60 0 286 172 0 23 chr17 36555224 36555311 -48883169 + CT-rich Low_complexity Low_complexity 2 86 0 341 189 39 31 chr17 36555496 36555623 -48882857 + (CCCG)n Simple_repeat Simple_repeat 3 130 0 363 292 153 14 chr17 36556010 36556154 -48882326 - L2 LINE L2 0 3272 3109 21 0 0 0 chr17 36556775 36556796 -48881684 + GC_rich Low_complexity Low_complexity 1 21 0 490 320 13 7 chr17 36557539 36557692 -48880788 - MIR SINE MIR -66 196 43 375 274 124 20 chr17 36558024 36558177 -48880303 + MIR SINE MIR 77 245 -17 24 53 0 0 chr17 36558369 36558407 -48880073 + GC_rich Low_complexity Low_complexity 1 38 0 397 247 110 32 chr17 36558857 36559011 -48879469 + MIR SINE MIR 22 187 -75 375 253 88 7 chr17 36559566 36559710 -48878770 + MIR3 SINE MIR 39 208 0 2274 93 3 0 chr17 36559803 36560113 -48878367 - AluY SINE Alu 0 311 1 263 305 53 63 chr17 36560179 36560532 -48877948 - L2 LINE L2 0 3272 2924 2165 94 10 7 chr17 36560532 36560830 -48877650 + AluSg1 SINE Alu 1 299 -10 1219 91 0 18 chr17 36560830 36560995 -48877485 + AluSg/x SINE Alu 134 295 -17 262 333 167 0 chr17 36561237 36561477 -48877003 - L2 LINE L2 -1222 2092 1813 339 278 139 0 chr17 36561617 36561732 -48876748 - MIR SINE MIR 0 262 132 310 270 214 0 chr17 36561737 36561863 -48876617 + MIR3 SINE MIR 55 207 -1 2358 67 7 0 chr17 36561930 36562228 -48876252 - AluSp SINE Alu -13 300 1 959 114 0 0 chr17 36562249 36562380 -48876100 - AluSg SINE Alu -179 131 1 470 209 47 0 chr17 36562382 36562468 -48876012 - AluJ/FLAM SINE Alu -222 90 1 240 369 45 19 chr17 36562611 36562768 -48875712 - L2 LINE L2 0 3313 3153 376 218 127 9 chr17 36563033 36563143 -48875337 + L2 LINE L2 3191 3313 0 204 232 256 24 chr17 36563238 36563363 -48875117 - L2 LINE L2 -843 2471 2318 332 345 29 24 chr17 36563486 36563692 -48874788 - L2 LINE L2 -1067 2247 2041 392 66 0 16 chr17 36564015 36564076 -48874404 + (TG)n Simple_repeat Simple_repeat 2 61 0 2396 84 0 3 chr17 36564128 36564439 -48874041 + AluSg SINE Alu 1 310 0 1992 112 21 14 chr17 36564834 36565121 -48873359 - AluSg SINE Alu -21 289 1 2027 137 0 0 chr17 36565138 36565430 -48873050 + AluSx SINE Alu 1 292 -20 1602 171 0 4 chr17 36565458 36565715 -48872765 + AluJb SINE Alu 34 289 -23 2235 122 0 0 chr17 36565750 36566062 -48872418 + AluSq SINE Alu 1 312 -1 926 220 43 56 chr17 36566066 36566370 -48872110 - L1ME2 LINE L1 -9 6155 5856 1648 230 120 29 chr17 36567171 36567552 -48870928 + L2 LINE L2 2366 2808 -506 2187 117 7 0 chr17 36567552 36567859 -48870621 + AluSx SINE Alu 3 311 -1 1648 230 120 29 chr17 36567859 36567994 -48870486 + L2 LINE L2 2808 2929 -385 1874 149 3 3 chr17 36568050 36568338 -48870142 - AluJb SINE Alu -23 289 2 605 227 76 91 chr17 36568340 36568367 -48870113 + L2 LINE L2 3053 3079 -234 1931 110 48 7 chr17 36568367 36568664 -48869816 + AluSq SINE Alu 1 308 0 605 227 76 91 chr17 36568664 36568899 -48869581 + L2 LINE L2 3079 3312 -1 189 291 63 70 chr17 36570418 36570498 -48867982 + MIR SINE MIR 65 145 -117 2176 110 7 3 chr17 36570498 36570806 -48867674 - AluSx SINE Alu -3 309 1 189 291 63 70 chr17 36570806 36570883 -48867597 + MIR SINE MIR 145 221 -41 439 266 108 37 chr17 36570966 36571207 -48867273 + L1MC5 LINE L1 7311 7568 -393 1352 171 145 15 chr17 36571209 36571330 -48867150 + AluJo SINE Alu 1 105 -207 234 0 0 0 chr17 36571330 36571356 -48867124 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 1052 9 0 0 chr17 36571356 36571472 -48867008 + L1PA5 LINE L1 6027 6170 0 232 36 0 0 chr17 36571472 36571500 -48866980 + (TAAA)n Simple_repeat Simple_repeat 2 180 0 497 216 14 58 chr17 36571502 36571641 -48866839 + FLAM_A SINE Alu 1 133 0 439 273 0 35 chr17 36571645 36571788 -48866692 + L1MC5 LINE L1 7559 7696 -265 210 236 0 0 chr17 36571779 36571834 -48866646 + (TATATG)n Simple_repeat Simple_repeat 5 59 0 * 1967 126 21 0 chr17 36571834 36572120 -48866360 - AluSx SINE Alu -20 292 1 886 207 0 0 chr17 36572209 36572373 -48866107 + FRAM SINE Alu 1 164 -2 2410 87 0 10 chr17 36572382 36572681 -48865799 + AluY SINE Alu 1 296 -15 2308 119 0 0 chr17 36572833 36573135 -48865345 - AluSx SINE Alu -10 302 1 269 310 50 20 chr17 36573207 36573407 -48865073 - L2 LINE L2 -211 3061 2856 2316 113 0 0 chr17 36573497 36573798 -48864682 + AluSx SINE Alu 1 301 -11 429 189 0 0 chr17 36573862 36573936 -48864544 - FLAM_A SINE Alu -57 85 12 1507 129 0 52 chr17 36573943 36573989 -48864491 + AluJb SINE Alu 80 127 -185 2323 86 7 0 chr17 36573989 36574281 -48864199 - AluSp SINE Alu -19 294 1 1507 129 0 52 chr17 36574281 36574466 -48864014 + AluJb SINE Alu 127 299 -13 636 317 144 16 chr17 36574561 36575261 -48863219 - L2 LINE L2 -841 2473 1684 2053 126 3 28 chr17 36575478 36575796 -48862684 - AluSx SINE Alu -2 310 1 297 283 43 0 chr17 36575969 36576061 -48862419 + L2 LINE L2 3177 3272 0 2346 102 3 0 chr17 36576252 36576557 -48861923 - AluSx SINE Alu -6 306 1 1903 158 0 20 chr17 36576584 36576882 -48861598 - AluJo SINE Alu -15 297 6 410 217 70 43 chr17 36576929 36577044 -48861436 + L2 LINE L2 3160 3277 -36 292 114 129 14 chr17 36577044 36577114 -48861366 - MER53 DNA DNA 0 189 112 2053 109 6 59 chr17 36577140 36577462 -48861018 - AluSq SINE Alu -8 305 1 921 179 62 110 chr17 36577531 36577818 -48860662 + L1MC5 LINE L1 7381 7643 -318 2169 137 0 13 chr17 36577818 36578124 -48860356 - AluSx SINE Alu -10 302 1 921 179 62 110 chr17 36578124 36578254 -48860226 + L1MC5 LINE L1 7643 7778 -183 1903 164 23 3 chr17 36578270 36578575 -48859905 + AluJb SINE Alu 1 311 -1 2232 124 0 19 chr17 36578607 36578921 -48859559 - AluSx SINE Alu -4 308 1 2394 52 42 3 chr17 36578939 36579228 -48859252 - AluY SINE Alu -11 300 1 405 205 67 5 chr17 36579228 36579341 -48859139 + L1ME2 LINE L1 6053 6155 -9 1391 186 46 11 chr17 36579342 36579622 -48858858 - AluJb SINE Alu -12 300 11 440 224 48 16 chr17 36579653 36579778 -48858702 + L1MC5 LINE L1 7785 7913 -48 419 323 8 8 chr17 36579816 36579949 -48858531 - MIR SINE MIR -114 148 16 498 227 70 0 chr17 36580115 36580243 -48858237 + MIR SINE MIR 7 143 -119 2088 112 6 38 chr17 36580244 36580417 -48858063 - AluSx SINE Alu -9 303 126 279 0 0 0 chr17 36580417 36580448 -48858032 + (TTTA)n Simple_repeat Simple_repeat 1 31 0 2126 112 4 0 chr17 36580449 36580726 -48857754 - AluSc SINE Alu -31 278 1 2088 112 6 38 chr17 36580726 36580863 -48857617 - AluSx SINE Alu -185 127 1 1905 188 72 53 chr17 36580874 36580925 -48857555 + L1MB7 LINE L1 5536 5585 -599 1845 162 26 7 chr17 36580925 36581227 -48857253 - AluJb SINE Alu -4 308 1 1905 188 72 53 chr17 36581227 36581254 -48857226 + L1MB7 LINE L1 5585 5610 -574 1870 148 6 19 chr17 36581254 36581565 -48856915 + AluJo SINE Alu 1 307 -5 1905 188 72 53 chr17 36581565 36581781 -48856699 + L1MB7 LINE L1 5610 5820 -364 2376 91 3 0 chr17 36581781 36582078 -48856402 + AluSp SINE Alu 1 298 -15 1905 188 72 53 chr17 36582078 36582309 -48856171 + L1MB7 LINE L1 5820 6073 -111 2265 87 35 0 chr17 36582309 36582596 -48855884 + AluSx SINE Alu 1 297 -15 1040 149 13 0 chr17 36582597 36582751 -48855729 + AluY SINE Alu 133 288 -23 411 150 68 2 chr17 36582758 36582857 -48855623 + L1MB8 LINE L1 6062 6174 0 2386 79 0 3 chr17 36582864 36583154 -48855326 + AluSc SINE Alu 1 289 -20 206 229 186 0 chr17 36583157 36583227 -48855253 + MIR SINE MIR 159 241 -21 392 262 58 0 chr17 36583600 36583703 -48854777 - MIR SINE MIR -74 188 80 414 0 0 0 chr17 36584151 36584197 -48854283 + (TG)n Simple_repeat Simple_repeat 2 47 0 576 265 73 18 chr17 36584732 36584951 -48853529 - L2 LINE L2 0 3313 3083 205 179 107 0 chr17 36585288 36585344 -48853136 - L2 LINE L2 0 3313 3252 23 101 0 0 chr17 36585861 36585940 -48852540 + GC_rich Low_complexity Low_complexity 1 79 0 24 32 0 0 chr17 36586110 36586141 -48852339 + GC_rich Low_complexity Low_complexity 1 31 0 186 43 0 0 chr17 36589081 36589104 -48849376 + (TGGGGG)n Simple_repeat Simple_repeat 1 23 0 723 225 175 81 chr17 36589709 36589775 -48848705 - MLT1D LTR MaLR -4 501 443 2300 94 0 7 chr17 36589775 36590072 -48848408 + AluSc SINE Alu 1 295 -14 723 225 175 81 chr17 36590072 36590463 -48848017 - MLT1D LTR MaLR -62 443 1 1639 146 6 73 chr17 36592374 36592690 -48845790 + AluJo SINE Alu 6 300 -12 252 286 66 11 chr17 36592819 36592910 -48845570 + L2 LINE L2 3214 3309 -4 438 219 112 9 chr17 36593197 36593346 -48845134 - MIR SINE MIR -50 212 38 451 238 50 56 chr17 36593366 36593468 -48845012 - MIR SINE MIR -1 261 158 2209 109 0 3 chr17 36593468 36593803 -48844677 - AluSx SINE Alu 0 334 1 451 238 50 56 chr17 36593803 36593859 -48844621 - MIR SINE MIR -104 158 103 193 171 49 0 chr17 36594136 36594177 -48844303 + MIR SINE MIR 109 151 -57 1773 178 3 16 chr17 36594224 36594390 -48844090 - AluJb SINE Alu -12 300 133 2414 98 0 0 chr17 36594390 36594696 -48843784 - AluSg SINE Alu -4 306 1 2106 95 21 32 chr17 36594698 36594983 -48843497 - AluSx SINE Alu -16 296 15 1773 178 3 16 chr17 36594983 36595117 -48843363 - AluJb SINE Alu -180 132 1 1353 261 66 5 chr17 36595164 36595590 -48842890 - L1ME3 LINE L1 -17 6145 5694 2332 117 0 0 chr17 36595590 36595898 -48842582 - AluSx SINE Alu -4 308 1 1353 261 66 5 chr17 36595898 36595914 -48842566 - L1ME3 LINE L1 -468 5694 5680 192 381 46 53 chr17 36595935 36596216 -48842264 - L2 LINE L2 -16 3256 2978 218 232 73 0 chr17 36596576 36596658 -48841822 - L2 LINE L2 -786 2528 2441 1768 149 13 48 chr17 36596822 36597131 -48841349 + AluJb SINE Alu 8 305 -7 241 210 0 48 chr17 36597142 36597204 -48841276 + GA-rich Low_complexity Low_complexity 1 59 0 542 287 88 27 chr17 36597234 36597646 -48840834 + MLT1J LTR MaLR 21 499 -12 22 35 0 0 chr17 36597741 36597770 -48840710 + AT_rich Low_complexity Low_complexity 1 29 0 2062 125 7 3 chr17 36597872 36598167 -48840313 + AluJb SINE Alu 1 296 -16 231 218 0 0 chr17 36598515 36598570 -48839910 + (CA)n Simple_repeat Simple_repeat 1 55 0 2321 113 3 6 chr17 36598592 36598903 -48839577 + AluSx SINE Alu 1 310 -2 1823 187 3 0 chr17 36598907 36599212 -48839268 + AluJb SINE Alu 1 306 -6 1220 158 0 0 chr17 36599219 36599402 -48839078 + FRAM SINE Alu 1 175 -1 2048 89 19 0 chr17 36599402 36599661 -48838819 + AluSg SINE Alu 33 296 -14 2090 105 46 0 chr17 36599661 36599946 -48838534 + AluSx SINE Alu 1 298 -14 1675 173 0 30 chr17 36600582 36600701 -48837779 + AluJo SINE Alu 1 122 -190 2645 44 0 0 chr17 36600701 36600997 -48837483 - AluY SINE Alu -15 296 1 1675 173 0 30 chr17 36600997 36601178 -48837302 + AluJo SINE Alu 122 292 -20 403 263 196 15 chr17 36602527 36602660 -48835820 + MER5A DNA MER1_type 27 183 -6 2178 87 3 17 chr17 36603763 36604050 -48834430 - AluSx SINE Alu -6 306 24 2328 57 35 3 chr17 36604074 36604357 -48834123 - AluY SINE Alu -6 305 14 2166 118 31 0 chr17 36604357 36604644 -48833836 - AluSx SINE Alu -14 298 3 1626 123 30 105 chr17 36605082 36605414 -48833066 - AluYb8 SINE Alu -7 311 5 1114 154 51 28 chr17 36606728 36606942 -48831538 + MER20 DNA MER1_type 1 219 0 203 377 87 14 chr17 36606969 36607107 -48831373 + L2 LINE L2 3163 3310 -3 2263 128 0 0 chr17 36607390 36607694 -48830786 + AluSq SINE Alu 1 304 -9 1219 142 0 0 chr17 36607695 36607871 -48830609 + AluSg/x SINE Alu 135 310 0 602 259 40 81 chr17 36608087 36608166 -48830314 + MIR SINE MIR 14 95 -167 2460 58 7 10 chr17 36608166 36608460 -48830020 - AluY SINE Alu -18 293 1 602 259 40 81 chr17 36608460 36608627 -48829853 + MIR SINE MIR 95 250 -12 311 133 0 0 chr17 36608640 36608729 -48829751 - Alu SINE Alu 0 328 240 1555 172 20 40 chr17 36608804 36609100 -48829380 - AluJo SINE Alu -20 292 3 1391 144 0 47 chr17 36609137 36609373 -48829107 + AluJb SINE Alu 85 309 -3 2562 239 35 29 chr17 36609420 36609746 -48828734 + L1MEc LINE L1 38 361 -6035 2345 94 3 3 chr17 36609746 36610045 -48828435 + AluSq SINE Alu 1 299 -14 2562 239 35 29 chr17 36610045 36610437 -48828043 + L1MEc LINE L1 361 760 -5636 1917 143 21 3 chr17 36610441 36610728 -48827752 + AluSg SINE Alu 1 292 -18 216 0 0 0 chr17 36610729 36610753 -48827727 + (CAAT)n Simple_repeat Simple_repeat 2 25 0 2208 134 0 0 chr17 36610755 36611061 -48827419 + AluSx SINE Alu 1 306 -6 1988 145 0 0 chr17 36611062 36611370 -48827110 + AluSx SINE Alu 1 308 0 503 231 62 78 chr17 36611439 36611582 -48826898 + L1MEc LINE L1 2215 2359 -4037 1577 182 61 10 chr17 36611582 36611879 -48826601 + AluJb SINE Alu 1 312 0 503 231 62 78 chr17 36611879 36611950 -48826530 + L1MEc LINE L1 2359 2427 -3969 2440 77 3 3 chr17 36611950 36612248 -48826232 + AluSp SINE Alu 1 298 -15 503 231 62 78 chr17 36612248 36612274 -48826206 + L1MEc LINE L1 2427 2452 -3944 284 262 56 9 chr17 36612318 36612425 -48826055 - L1ME3 LINE L1 -8 6154 6043 2213 108 0 3 chr17 36612425 36612711 -48825769 - AluSx SINE Alu -12 300 16 903 154 0 0 chr17 36612721 36612857 -48825623 - AluSq/x SINE Alu -175 137 2 1448 144 0 0 chr17 36612954 36613155 -48825325 - AluSg/x SINE Alu -38 274 74 282 125 0 0 chr17 36613155 36613195 -48825285 - Alu SINE Alu -268 40 1 618 150 4 33 chr17 36613225 36613360 -48825120 - L1ME3A LINE L1 -206 5968 5834 1348 163 88 46 chr17 36613360 36613643 -48824837 - AluJb SINE Alu -17 295 1 812 169 0 0 chr17 36613645 36613781 -48824699 - FLAM_C SINE Alu -5 138 3 1134 284 76 23 chr17 36613785 36614727 -48823753 - L1ME3A LINE L1 -351 5815 4776 2210 106 7 10 chr17 36614731 36615033 -48823447 - AluSx SINE Alu -11 301 1 885 226 72 16 chr17 36615040 36615080 -48823400 - L1ME3A LINE L1 -1868 4278 4242 2386 80 3 7 chr17 36615080 36615382 -48823098 - AluY SINE Alu -10 301 1 885 226 72 16 chr17 36615382 36615623 -48822857 - L1ME3A LINE L1 -1904 4242 3982 3777 212 95 50 chr17 36615663 36616105 -48822375 - L1ME2 LINE L1 0 6233 5812 2131 125 3 0 chr17 36616105 36616408 -48822072 + AluSx SINE Alu 3 306 -6 3777 212 95 50 chr17 36616408 36616707 -48821773 - L1ME2 LINE L1 -421 5812 5528 2252 68 47 0 chr17 36616707 36616985 -48821495 - AluSx SINE Alu -21 291 1 3777 212 95 50 chr17 36616985 36617039 -48821441 - L1ME2 LINE L1 -705 5528 5478 1963 147 3 10 chr17 36617039 36617331 -48821149 - AluJb SINE Alu -22 290 1 3777 212 95 50 chr17 36617331 36617839 -48820641 - L1ME2 LINE L1 -755 5478 4994 2561 71 3 0 chr17 36617839 36618147 -48820333 - AluY SINE Alu -2 309 1 3777 212 95 50 chr17 36618147 36619103 -48819377 - L1ME2 LINE L1 -1239 4994 3842 854 150 0 0 chr17 36619115 36619248 -48819232 + AluJo/FLAM SINE Alu 1 133 -169 1418 191 4 12 chr17 36619251 36619507 -48818973 + AluJo SINE Alu 46 299 -13 2349 91 3 3 chr17 36619576 36619872 -48818608 - AluSp SINE Alu -17 296 1 2276 123 3 0 chr17 36619878 36620187 -48818293 - AluSx SINE Alu -2 310 1 997 261 30 65 chr17 36620189 36620439 -48818041 - L1ME2 LINE L1 -2390 3825 3568 2209 103 7 0 chr17 36620439 36620770 -48817710 - AluSx SINE Alu 0 333 1 997 261 30 65 chr17 36620770 36620794 -48817686 - L1ME2 LINE L1 -2647 3568 3545 2314 106 3 0 chr17 36620794 36621096 -48817384 - AluSg SINE Alu -7 303 1 997 261 30 65 chr17 36621096 36621355 -48817125 - L1ME2 LINE L1 -2670 3545 3309 2363 95 6 16 chr17 36621372 36621687 -48816793 - AluSx SINE Alu 0 312 1 2416 219 63 68 chr17 36621733 36622503 -48815977 - L1ME2 LINE L1 -2869 3346 2574 1709 171 3 16 chr17 36622503 36622818 -48815662 - AluJo SINE Alu -1 311 1 2416 219 63 68 chr17 36622818 36622938 -48815542 - L1ME2 LINE L1 -3641 2574 2459 2069 123 0 22 chr17 36622938 36623255 -48815225 - AluSx SINE Alu 0 312 3 2416 219 63 68 chr17 36623255 36623372 -48815108 - L1ME2 LINE L1 -3756 2459 2343 850 154 0 21 chr17 36623378 36623521 -48814959 - FLAM_C SINE Alu -1 142 3 655 226 41 0 chr17 36623524 36623719 -48814761 - L1ME2 LINE L1 -4001 2395 2193 974 302 128 65 chr17 36623719 36623927 -48814553 - L2 LINE L2 -605 2709 2516 2151 94 3 7 chr17 36623927 36624225 -48814255 + AluSx SINE Alu 1 297 -15 974 302 128 65 chr17 36624225 36624245 -48814235 - L2 LINE L2 -798 2516 2499 1835 102 43 139 chr17 36624245 36624618 -48813862 - MER1B DNA MER1_type 0 337 1 974 302 128 65 chr17 36624618 36625026 -48813454 - L2 LINE L2 -815 2499 2118 2309 94 0 0 chr17 36625026 36625334 -48813146 + AluSg SINE Alu 1 308 -2 974 302 128 65 chr17 36625334 36625372 -48813108 - L2 LINE L2 -1196 2118 2084 2331 86 3 3 chr17 36625372 36625685 -48812795 - AluSp SINE Alu 0 313 1 974 302 128 65 chr17 36625685 36625859 -48812621 - L2 LINE L2 -1230 2084 1804 1131 103 0 0 chr17 36625859 36626014 -48812466 + AluSg/x SINE Alu 131 285 -27 1102 191 0 0 chr17 36626014 36626208 -48812272 + L1PB3 LINE L1 5951 6144 -10 442 239 49 84 chr17 36626219 36626298 -48812182 - MLT1I LTR MaLR -240 169 96 2205 59 38 10 chr17 36626298 36626588 -48811892 - AluY SINE Alu -13 298 1 442 239 49 84 chr17 36626588 36626650 -48811830 - MLT1I LTR MaLR -313 96 33 2127 102 0 0 chr17 36626678 36626962 -48811518 - AluSg SINE Alu -26 284 1 451 378 9 22 chr17 36626984 36627206 -48811274 - L2 LINE L2 -1970 1344 1126 1967 127 3 7 chr17 36627219 36627519 -48810961 - AluSx SINE Alu -9 303 5 397 262 29 0 chr17 36627562 36627665 -48810815 + L2 LINE L2 3206 3311 -2 889 152 0 0 chr17 36627690 36627822 -48810658 + FLAM_C SINE Alu 2 133 0 1851 116 29 0 chr17 36627871 36628184 -48810296 + AluSx SINE Alu 1 321 0 336 125 0 0 chr17 36628239 36628303 -48810177 + (TG)n Simple_repeat Simple_repeat 2 65 0 471 230 0 10 chr17 36628338 36628438 -48810042 + MER44D DNA MER2_type 1 369 -240 6241 31 12 3 chr17 36628453 36629217 -48809263 - SVA Other Other 0 1386 635 1020 89 122 24 chr17 36629245 36629492 -48808988 - SVA Other Other -520 866 596 1169 48 0 34 chr17 36629520 36629729 -48808751 - SVA Other Other -520 866 665 5429 68 80 5 chr17 36629744 36630548 -48807932 - SVA Other Other -520 866 3 687 121 85 7 chr17 36630550 36630575 -48807905 + MER44D DNA MER2_type 425 447 -2044 2268 113 0 0 chr17 36630575 36630886 -48807594 - AluSx SINE Alu -1 311 1 687 121 85 7 chr17 36630886 36631001 -48807479 + MER44D DNA MER2_type 447 576 -33 2270 103 0 0 chr17 36631024 36631334 -48807146 + AluSg SINE Alu 1 310 0 1850 147 3 0 chr17 36631395 36631703 -48806777 - AluJb SINE Alu 0 309 1 1048 88 0 7 chr17 36631703 36631839 -48806641 - AluSq/x SINE Alu -178 135 1 495 270 80 6 chr17 36631850 36632013 -48806467 - MLT1K LTR MaLR -72 516 342 758 238 15 81 chr17 36632042 36632315 -48806165 - MLT1K LTR MaLR -324 264 10 403 319 40 116 chr17 36632319 36632520 -48805960 - L1MC/D LINE L1 -757 5389 5174 1567 169 63 25 chr17 36632520 36632804 -48805676 + AluJo SINE Alu 3 297 -15 403 319 40 116 chr17 36632804 36632962 -48805518 - L1MC/D LINE L1 -972 5174 5270 2194 101 0 0 chr17 36632962 36633260 -48805220 - AluSq SINE Alu -15 298 1 403 319 40 116 chr17 36633260 36633600 -48804880 - L1MC/D LINE L1 -875 5271 4906 2143 98 0 13 chr17 36633878 36634184 -48804296 + AluSx SINE Alu 11 312 0 24 0 0 0 chr17 36634184 36634208 -48804272 + AT_rich Low_complexity Low_complexity 1 24 0 431 292 127 25 chr17 36634455 36634942 -48803538 - L1MC/D LINE L1 -1459 4687 4151 798 241 79 28 chr17 36634994 36635284 -48803196 - L1ME1 LINE L1 -5 6161 5857 2276 93 0 0 chr17 36635293 36635593 -48802887 + AluSx SINE Alu 1 300 -12 1078 148 17 0 chr17 36635593 36635769 -48802711 + AluSg/x SINE Alu 132 310 0 884 172 91 60 chr17 36635786 36636010 -48802470 - L1ME1 LINE L1 -773 5586 5370 1604 149 44 37 chr17 36636010 36636175 -48802305 - AluJb SINE Alu -14 298 129 2339 75 0 25 chr17 36636175 36636493 -48801987 - AluSx SINE Alu -2 310 1 1604 149 44 37 chr17 36636493 36636623 -48801857 - AluJb SINE Alu -183 129 1 884 172 91 60 chr17 36636623 36636634 -48801846 - L1ME1 LINE L1 -989 5370 5361 1852 129 26 0 chr17 36636634 36636949 -48801531 - AluSx SINE Alu 0 325 4 884 172 91 60 chr17 36636949 36637080 -48801400 - L1ME1 LINE L1 -998 5361 5203 2253 98 3 0 chr17 36637081 36637387 -48801093 - AluSx SINE Alu -5 307 1 1074 179 0 0 chr17 36637387 36637566 -48800914 - FRAM SINE Alu -3 173 1 1878 158 7 0 chr17 36637570 36637867 -48800613 - AluJb SINE Alu -12 300 2 1845 244 106 35 chr17 36637867 36638109 -48800371 - L1ME1 LINE L1 -1241 4905 4682 2140 119 3 3 chr17 36638109 36638420 -48800060 - AluSx SINE Alu -1 311 1 1845 244 106 35 chr17 36638420 36638954 -48799526 - L1ME1 LINE L1 -1464 4682 4074 2207 109 0 3 chr17 36639277 36639581 -48798899 + AluSx SINE Alu 1 303 -9 194 321 36 36 chr17 36639932 36640016 -48798464 - L2 LINE L2 -2781 533 450 335 175 0 0 chr17 36640282 36640339 -48798141 + MIR SINE MIR 90 146 -62 237 312 13 0 chr17 36641024 36641101 -48797379 + L2 LINE L2 3229 3306 -7 * 328 286 222 0 chr17 36641082 36641208 -48797272 - MIR SINE MIR -6 256 103 296 259 50 86 chr17 36641257 36641371 -48797109 + MIR3 SINE MIR 3 115 -93 1771 132 30 0 chr17 36641371 36641664 -48796816 - AluSx SINE Alu 0 309 9 296 259 50 86 chr17 36641664 36641686 -48796794 + MIR3 SINE MIR 115 136 -72 2337 87 0 0 chr17 36641831 36642140 -48796340 + AluY SINE Alu 1 309 -2 484 303 82 0 chr17 36642155 36642350 -48796130 + MIR SINE MIR 28 238 -24 210 37 0 0 chr17 36642451 36642478 -48796002 + (TC)n Simple_repeat Simple_repeat 2 28 0 1730 148 46 11 chr17 36642478 36642762 -48795718 - AluJb SINE Alu -18 294 1 188 304 98 68 chr17 36643050 36643316 -48795164 + L2 LINE L2 2820 3093 -179 379 267 114 0 chr17 36643933 36644038 -48794442 + MIR SINE MIR 28 144 -118 1160 160 0 0 chr17 36644551 36644732 -48793748 - AluJb SINE Alu 0 312 132 2000 132 13 0 chr17 36644833 36645137 -48793343 + AluSx SINE Alu 1 308 -4 1812 141 16 29 chr17 36645156 36645356 -48793124 - AluJb SINE Alu -4 308 112 2279 97 0 0 chr17 36645356 36645654 -48792826 + AluSg SINE Alu 1 298 -12 1812 141 16 29 chr17 36645654 36645765 -48792715 - AluJb SINE Alu -200 112 1 2227 105 0 22 chr17 36645782 36646097 -48792383 - AluSc SINE Alu -1 308 1 189 340 14 48 chr17 36646546 36646693 -48791787 - L2 LINE L2 -215 3057 2916 246 32 0 0 chr17 36646694 36646725 -48791755 + (TG)n Simple_repeat Simple_repeat 2 32 0 331 265 20 10 chr17 36646838 36646936 -48791544 - MER5C DNA MER1_type -1 323 225 457 133 214 0 chr17 36646959 36647057 -48791423 - MER5C DNA MER1_type -205 119 1 1846 83 0 0 chr17 36647421 36647651 -48790829 + AluSx SINE Alu 21 250 -62 1447 161 84 21 chr17 36648086 36648372 -48790108 - L1MB5 LINE L1 -10 6164 5861 741 194 0 0 chr17 36648388 36648512 -48789968 - FLAM_C SINE Alu -18 125 2 931 178 33 0 chr17 36648513 36648765 -48789715 - L1MB5 LINE L1 -311 5873 5503 221 206 0 32 chr17 36649179 36649242 -48789238 + CT-rich Low_complexity Low_complexity 4 64 0 2171 99 7 0 chr17 36649403 36649706 -48788774 - AluSx SINE Alu -6 306 2 2211 105 3 3 chr17 36649738 36650042 -48788438 - AluSq SINE Alu -9 304 1 316 118 0 0 chr17 36650298 36650349 -48788131 + AluSp/q SINE Alu 249 299 -4 2353 93 0 0 chr17 36650361 36650673 -48787807 + AluSx SINE Alu 1 312 0 417 255 21 0 chr17 36650673 36650767 -48787713 + MER5A DNA MER1_type 64 159 -30 31 0 0 0 chr17 36654606 36654637 -48783843 + GC_rich Low_complexity Low_complexity 1 31 0 28 0 0 0 chr17 36654693 36654721 -48783759 + GC_rich Low_complexity Low_complexity 1 28 0 357 302 7 13 chr17 36654736 36654885 -48783595 + (CG)n Simple_repeat Simple_repeat 1 148 0 57 85 0 0 chr17 36654912 36655053 -48783427 + GC_rich Low_complexity Low_complexity 1 141 0 241 230 23 23 chr17 36655159 36655246 -48783234 + G-rich Low_complexity Low_complexity 4 90 0 291 262 8 56 chr17 36655401 36655527 -48782953 + G-rich Low_complexity Low_complexity 4 123 0 348 143 36 0 chr17 36657511 36657595 -48780885 + CT-rich Low_complexity Low_complexity 1 87 0 216 111 0 0 chr17 36658536 36658572 -48779908 + (GGGA)n Simple_repeat Simple_repeat 3 38 0 294 255 11 75 chr17 36658731 36658919 -48779561 + CT-rich Low_complexity Low_complexity 1 176 0 390 115 0 0 chr17 36659076 36659137 -48779343 + (TG)n Simple_repeat Simple_repeat 2 62 0 503 256 71 12 chr17 36659499 36659667 -48778813 + MIR3 SINE MIR 17 194 -14 253 275 12 12 chr17 36660690 36660770 -48777710 + MIR SINE MIR 175 254 -8 298 297 0 85 chr17 36661049 36661167 -48777313 + L3b LINE CR1 1276 1383 -200 420 216 133 20 chr17 36661448 36661599 -48776881 + MIR3 SINE MIR 13 181 -27 255 125 0 0 chr17 36661730 36661770 -48776710 + (CA)n Simple_repeat Simple_repeat 2 41 0 731 298 55 8 chr17 36663048 36663286 -48775194 + MIR SINE MIR 1 249 -13 237 333 0 0 chr17 36664890 36664962 -48773518 + (TG)n Simple_repeat Simple_repeat 1 72 0 231 250 0 0 chr17 36665179 36665227 -48773253 + (TTTA)n Simple_repeat Simple_repeat 1 48 0 2207 82 0 0 chr17 36665243 36665523 -48772957 + AluSg SINE Alu 1 280 -30 306 281 37 0 chr17 36665541 36665623 -48772857 - L2 LINE L2 -15 3298 3214 585 296 63 14 chr17 36665953 36666176 -48772304 + MIR SINE MIR 22 255 -7 290 211 0 0 chr17 36666708 36666765 -48771715 - L3 LINE CR1 -103 1474 1418 465 356 28 0 chr17 36667073 36667253 -48771227 - MIR SINE MIR -2 260 76 183 193 0 158 chr17 36668040 36668097 -48770383 - L2 LINE L2 -15 3298 3251 * 606 297 68 0 chr17 36668071 36668276 -48770204 - MIR SINE MIR -31 231 14 217 371 35 0 chr17 36669245 36669361 -48769119 + L3 LINE CR1 1045 1164 -413 465 270 86 18 chr17 36669996 36670159 -48768321 + MIR SINE MIR 20 193 -69 2074 114 7 0 chr17 36670223 36670513 -48767967 + AluSx SINE Alu 1 292 -20 581 67 0 0 chr17 36671543 36671618 -48766862 + AluS SINE Alu 1 75 -238 186 167 0 0 chr17 36672663 36672699 -48765781 + CT-rich Low_complexity Low_complexity 2 37 0 247 308 15 0 chr17 36672707 36672772 -48765708 - MIR SINE MIR -72 136 71 263 302 0 0 chr17 36674235 36674298 -48764182 + MIR SINE MIR 86 148 -60 186 71 0 0 chr17 36675473 36675501 -48762979 + (TG)n Simple_repeat Simple_repeat 1 28 0 198 167 0 0 chr17 36675881 36675917 -48762563 + CT-rich Low_complexity Low_complexity 1 36 0 2423 77 3 0 chr17 36676906 36677217 -48761263 + AluSq SINE Alu 1 312 -1 192 191 26 0 chr17 36677297 36677352 -48761128 - MIR SINE MIR -57 151 97 1853 125 10 27 chr17 36677390 36677685 -48760795 + AluJb SINE Alu 7 296 -16 243 239 68 8 chr17 36679078 36679195 -48759285 + MER113 DNA MER1_type? 37 160 -361 2203 116 0 3 chr17 36679323 36679634 -48758846 - AluSg SINE Alu 0 310 1 1720 188 3 10 chr17 36679635 36679938 -48758542 + AluJo SINE Alu 12 312 0 358 302 69 0 chr17 36680168 36680284 -48758196 + MIR SINE MIR 49 172 -90 264 59 0 0 chr17 36680447 36680481 -48757999 + (TG)n Simple_repeat Simple_repeat 2 35 0 29 28 0 0 chr17 36682037 36682073 -48756407 + GC_rich Low_complexity Low_complexity 1 36 0 243 342 104 42 chr17 36683548 36683788 -48754692 - L2 LINE L2 -182 3090 2836 228 333 184 9 chr17 36684768 36684882 -48753598 + L2 LINE L2 3137 3270 -2 1742 126 41 38 chr17 36685210 36685503 -48752977 + AluJb SINE Alu 1 294 -18 22 70 0 0 chr17 36687792 36687835 -48750645 + GC_rich Low_complexity Low_complexity 1 43 0 28 29 0 0 chr17 36687899 36687934 -48750546 + GC_rich Low_complexity Low_complexity 1 35 0 180 97 0 0 chr17 36687957 36687988 -48750492 + (CGG)n Simple_repeat Simple_repeat 1 31 0 309 227 13 40 chr17 36689411 36689486 -48748994 - L2 LINE L2 0 3272 3200 239 320 170 0 chr17 36691993 36692193 -48746287 + L2 LINE L2 2827 3060 -212 622 279 39 17 chr17 36693365 36693544 -48744936 + MIR SINE MIR 2 184 -78 1142 201 201 0 chr17 36693554 36693813 -48744667 + AluJb SINE Alu 1 311 -1 699 46 0 0 chr17 36693821 36693908 -48744572 + (GGAA)n Simple_repeat Simple_repeat 2 88 0 225 0 0 0 chr17 36693911 36693936 -48744544 + (CAAAA)n Simple_repeat Simple_repeat 3 27 0 471 239 82 14 chr17 36694027 36694195 -48744285 - MER5B DNA MER1_type -3 175 5 220 230 27 27 chr17 36694215 36694289 -48744191 - L3 LINE CR1 -117 1460 1387 188 65 0 32 chr17 36695396 36695427 -48743053 + (TATATG)n Simple_repeat Simple_repeat 2 31 0 204 40 0 0 chr17 36696005 36696030 -48742450 + (CCCCCA)n Simple_repeat Simple_repeat 4 28 0 331 271 25 37 chr17 36696805 36697016 -48741464 + CT-rich Low_complexity Low_complexity 1 208 0 23 0 0 0 chr17 36698970 36698993 -48739487 + GC_rich Low_complexity Low_complexity 1 23 0 245 298 107 0 chr17 36699571 36699655 -48738825 + MIR3 SINE MIR 91 183 -25 192 284 222 0 chr17 36699921 36700002 -48738478 - L2 LINE L2 -35 3237 3139 433 267 78 0 chr17 36700510 36700626 -48737854 + MIR3 SINE MIR 63 187 -21 223 261 46 0 chr17 36700747 36700812 -48737668 + MIR SINE MIR 103 170 -92 334 242 81 0 chr17 36703327 36703426 -48735054 + MIR SINE MIR 32 138 -70 1023 201 11 0 chr17 36704448 36704622 -48733858 + MER45A DNA AcHobo 1 176 -2 202 306 61 20 chr17 36705086 36705184 -48733296 + MIR SINE MIR 33 134 -128 1276 239 65 11 chr17 36705219 36705591 -48732889 - MLT1J1 LTR MaLR -3 443 52 383 365 0 0 chr17 36705594 36705731 -48732749 + MIR SINE MIR 123 259 -3 2251 88 7 0 chr17 36706068 36706365 -48732115 + AluSp SINE Alu 1 299 -14 2207 90 0 26 chr17 36706740 36707050 -48731430 - AluY SINE Alu -7 304 3 2116 112 0 16 chr17 36707052 36707355 -48731125 - AluSg SINE Alu -12 298 1 1998 127 7 10 chr17 36707360 36707660 -48730820 - AluSx SINE Alu -7 305 7 252 149 0 0 chr17 36707726 36707773 -48730707 + (GAA)n Simple_repeat Simple_repeat 2 48 0 364 325 68 0 chr17 36707886 36708003 -48730477 - L2 LINE L2 0 3272 3148 2421 66 3 0 chr17 36708854 36709157 -48729323 - AluSx SINE Alu -8 304 1 466 232 125 0 chr17 36709202 36709314 -48729166 - FLAM_A SINE Alu -7 135 10 1312 103 0 0 chr17 36709330 36709504 -48728976 - AluSp SINE Alu -6 307 134 2150 97 3 3 chr17 36709504 36709803 -48728677 - AluSq SINE Alu -14 299 1 1970 146 3 0 chr17 36710731 36711026 -48727454 + AluSx SINE Alu 1 296 -16 794 253 0 12 chr17 36711034 36711200 -48727280 + AluJo SINE Alu 127 290 -22 812 161 0 0 chr17 36711231 36711355 -48727125 + FLAM_C SINE Alu 3 126 -17 447 293 33 87 chr17 36711386 36711539 -48726941 - HAL1 LINE L1 -72 2435 2275 1921 157 0 25 chr17 36711539 36711717 -48726763 - AluSx SINE Alu -1 311 130 2350 90 0 0 chr17 36711717 36712016 -48726464 - AluSp SINE Alu -12 301 3 2193 87 27 3 chr17 36712018 36712317 -48726163 - AluSx SINE Alu -6 306 1 1921 157 0 25 chr17 36712317 36712454 -48726026 - AluSx SINE Alu -183 129 1 447 293 33 87 chr17 36712454 36712724 -48725756 - HAL1 LINE L1 -232 2275 2035 303 147 55 73 chr17 36712727 36712800 -48725680 - HAL1 LINE L1 -1170 1337 1265 1592 154 18 42 chr17 36712800 36713085 -48725395 - AluJo SINE Alu -33 279 2 303 147 55 73 chr17 36713085 36713120 -48725360 - HAL1 LINE L1 -1242 1265 1231 2319 89 0 16 chr17 36713179 36713494 -48724986 - AluSx SINE Alu -2 310 1 296 338 45 32 chr17 36713762 36713919 -48724561 + L3b LINE CR1 1414 1572 -11 2455 58 0 10 chr17 36715757 36716066 -48722414 + AluY SINE Alu 1 306 -5 2138 79 7 4 chr17 36717063 36717376 -48721104 + AluY SINE Alu 1 314 0 202 279 0 44 chr17 36717542 36717610 -48720870 - L2 LINE L2 -2 3311 3247 2046 116 0 28 chr17 36717656 36717976 -48720504 + AluSq SINE Alu 1 311 -2 230 241 19 0 chr17 36718108 36718162 -48720318 - L2 LINE L2 -208 3064 3010 1450 212 72 3 chr17 36718247 36718539 -48719941 + AluJo SINE Alu 1 312 0 2198 82 6 25 chr17 36719899 36720216 -48718264 - AluSq SINE Alu -2 311 1 273 272 12 0 chr17 36720820 36720901 -48717579 - L1ME3A LINE L1 -9 6161 6080 260 282 261 7 chr17 36720910 36721052 -48717428 - MER5A DNA MER1_type -5 184 7 969 108 0 23 chr17 36721076 36721206 -48717274 + AluJo SINE Alu 1 127 -185 2124 108 3 19 chr17 36721719 36722026 -48716454 + AluSq SINE Alu 5 306 -7 2377 73 6 32 chr17 36722406 36722722 -48715758 - AluSq SINE Alu -5 308 1 990 168 12 0 chr17 36723665 36723826 -48714654 + AluJo SINE Alu 137 299 -3 1925 157 0 10 chr17 36723826 36724125 -48714355 + AluJb SINE Alu 1 296 -16 243 313 69 30 chr17 36724605 36724736 -48713744 - MIR3 SINE MIR -31 177 42 259 315 45 9 chr17 36727055 36727166 -48711314 + L2 LINE L2 3180 3294 -19 1726 157 3 31 chr17 36728351 36728638 -48709842 + AluJo SINE Alu 22 300 -12 888 223 6 6 chr17 36728639 36728805 -48709675 + AluJb SINE Alu 134 299 -13 1091 108 12 30 chr17 36729077 36729243 -48709237 - AluSc SINE Alu 0 309 147 1460 160 25 7 chr17 36729243 36729466 -48709014 - L1MB3 LINE L1 -45 6138 5908 2094 100 60 20 chr17 36729466 36729766 -48708714 + AluSp SINE Alu 1 312 -1 1460 160 25 7 chr17 36729766 36729817 -48708663 - L1MB3 LINE L1 -275 5908 5859 2249 66 0 75 chr17 36729853 36730188 -48708292 - AluY SINE Alu 0 311 2 1983 134 0 23 chr17 36730190 36730495 -48707985 - AluSg SINE Alu -12 298 1 2111 134 0 16 chr17 36730502 36730808 -48707672 - AluSx SINE Alu -5 307 7 249 200 0 0 chr17 36730888 36730938 -48707542 + GA-rich Low_complexity Low_complexity 2 51 0 216 362 32 11 chr17 36731175 36731269 -48707211 - L2 LINE L2 -29 3243 3148 2174 89 0 49 chr17 36732129 36732456 -48706024 - AluSx SINE Alu -1 311 1 420 208 139 0 chr17 36732503 36732604 -48705876 - FLAM_A SINE Alu -7 135 21 1281 92 0 78 chr17 36732631 36732813 -48705667 - AluSp SINE Alu -4 309 143 2023 160 3 10 chr17 36732813 36733119 -48705361 - AluSp SINE Alu -9 304 1 1281 92 0 78 chr17 36733119 36733142 -48705338 - AluSp SINE Alu -170 143 120 2088 126 0 31 chr17 36733226 36733544 -48704936 - AluSq SINE Alu -5 308 1 2238 110 0 25 chr17 36733564 36733882 -48704598 - AluY SINE Alu -1 310 1 1634 179 3 29 chr17 36733885 36734193 -48704287 - AluJo SINE Alu -12 300 1 2347 67 0 29 chr17 36734322 36734637 -48703843 - AluSx SINE Alu -6 306 1 1900 151 3 11 chr17 36735573 36735858 -48702622 + AluSx SINE Alu 1 283 -29 2091 114 3 29 chr17 36735877 36736185 -48702295 + AluY SINE Alu 3 302 -9 1565 130 0 0 chr17 36736661 36736877 -48701603 + AluSg/x SINE Alu 67 282 -30 734 0 12 0 chr17 36736877 36736963 -48701517 + (TAGA)n Simple_repeat Simple_repeat 1 87 0 310 287 191 0 chr17 36787787 36787902 -48650578 - L2 LINE L2 0 3313 3177 398 286 43 81 chr17 36787914 36787983 -48650497 - MIR SINE MIR -14 248 178 2337 71 3 3 chr17 36787983 36788293 -48650187 - AluY SINE Alu -1 310 1 398 286 43 81 chr17 36788293 36788433 -48650047 - MIR SINE MIR -84 178 47 359 287 51 72 chr17 36788488 36788683 -48649797 - L2 LINE L2 -210 3062 2872 434 256 199 6 chr17 36788929 36789085 -48649395 - MER5A DNA MER1_type 0 189 4 236 300 12 38 chr17 36792683 36792763 -48645717 - MIR3 SINE MIR -25 183 106 461 100 0 0 chr17 36792847 36792907 -48645573 + FRAM/FAM SINE Alu 9 68 -108 268 247 71 12 chr17 36792939 36793024 -48645456 + MIR3 SINE MIR 116 205 -3 2121 106 10 7 chr17 36793235 36793537 -48644943 - AluSx SINE Alu -9 303 1 213 279 0 33 chr17 36794698 36794759 -48643721 - MIR SINE MIR -124 138 80 336 221 0 13 chr17 36794775 36794852 -48643628 + AluJo SINE Alu 1 76 -226 460 95 0 0 chr17 36794852 36794915 -48643565 - AluJo SINE Alu -15 297 235 894 148 49 7 chr17 36794915 36795057 -48643423 - AluJo SINE Alu -152 160 13 1228 150 52 5 chr17 36795063 36795256 -48643224 + AluJo SINE Alu 76 277 -35 194 314 181 0 chr17 36795348 36795453 -48643027 - L2 LINE L2 -182 3090 2967 2296 95 0 7 chr17 36795688 36795993 -48642487 + AluSc SINE Alu 1 303 -6 225 299 38 45 chr17 36796013 36796170 -48642310 - L2 LINE L2 -286 2986 2831 2205 91 3 7 chr17 36796351 36796647 -48641833 + AluSp SINE Alu 1 295 -18 1236 111 0 11 chr17 36796663 36796844 -48641636 + AluSq SINE Alu 120 298 -15 297 207 46 46 chr17 36797019 36797106 -48641374 + L2 LINE L2 3183 3269 -44 2195 77 13 16 chr17 36797354 36797664 -48640816 + AluSx SINE Alu 1 309 -3 242 312 83 0 chr17 36797666 36797775 -48640705 - L2 LINE L2 -15 3257 3140 191 244 0 22 chr17 36797860 36797905 -48640575 - L2 LINE L2 -90 3223 3180 818 246 56 32 chr17 36798570 36798822 -48639658 - MIR SINE MIR -3 259 2 1331 136 0 68 chr17 36798843 36799017 -48639463 - AluJo SINE Alu -7 305 150 2786 10 0 0 chr17 36799017 36799328 -48639152 - AluY SINE Alu 0 311 1 1331 136 0 68 chr17 36799328 36799388 -48639092 - AluJo SINE Alu -162 150 87 207 0 0 0 chr17 36799388 36799411 -48639069 + (T)n Simple_repeat Simple_repeat 1 23 0 1518 149 0 13 chr17 36799425 36799653 -48638827 - AluJo SINE Alu -85 227 3 278 242 73 89 chr17 36800816 36800940 -48637540 + MIR3 SINE MIR 9 130 -78 1626 161 30 13 chr17 36800947 36801246 -48637234 - AluJb SINE Alu -3 309 6 257 240 19 39 chr17 36802630 36802734 -48635746 + CT-rich Low_complexity Low_complexity 1 102 0 * 288 333 6 13 chr17 36802693 36802849 -48635631 + C-rich Low_complexity Low_complexity 1 155 0 201 178 278 22 chr17 36803100 36803190 -48635290 + MIR SINE MIR 34 146 -62 399 41 0 0 chr17 36803968 36804017 -48634463 + (TG)n Simple_repeat Simple_repeat 1 49 0 66 73 0 0 chr17 36804321 36804457 -48634023 + GC_rich Low_complexity Low_complexity 1 136 0 24 32 0 0 chr17 36804499 36804530 -48633950 + GC_rich Low_complexity Low_complexity 1 31 0 30 77 0 0 chr17 36804664 36804729 -48633751 + GC_rich Low_complexity Low_complexity 1 65 0 253 253 13 0 chr17 36805518 36805597 -48632883 + G-rich Low_complexity Low_complexity 5 84 0 288 232 40 40 chr17 36805871 36806022 -48632458 + (CAGAGA)n Simple_repeat Simple_repeat 6 156 0 1781 160 6 13 chr17 36806491 36806804 -48631676 - AluSx SINE Alu -1 311 1 2099 89 6 38 chr17 36807414 36807730 -48630750 - AluSq SINE Alu -7 306 1 629 258 165 0 chr17 36809107 36809289 -48629191 - MIR SINE MIR -35 227 16 203 304 38 114 chr17 36809845 36810029 -48628451 + MIR SINE MIR 20 189 -73 2219 108 0 9 chr17 36810332 36810647 -48627833 + AluSx SINE Alu 1 312 0 1139 140 0 0 chr17 36810647 36810811 -48627669 + AluSg/x SINE Alu 134 297 -15 183 319 0 0 chr17 36810811 36810858 -48627622 - L2 LINE L2 -21 3292 3246 595 229 151 21 chr17 36811683 36811875 -48626605 - MIR SINE MIR -6 256 40 21 57 0 0 chr17 36814246 36814281 -48624199 + GC_rich Low_complexity Low_complexity 1 35 0 1506 224 0 10 chr17 36814658 36814971 -48623509 - AluJb SINE Alu -2 310 1 1596 189 11 3 chr17 36814971 36815256 -48623224 - AluJo SINE Alu -15 297 11 183 42 0 0 chr17 36815641 36815665 -48622815 + (TTCC)n Simple_repeat Simple_repeat 1 24 0 451 332 89 16 chr17 36816067 36816257 -48622223 + MIR SINE MIR 20 223 -39 1316 251 30 77 chr17 36816761 36817394 -48621086 - L1ME1 LINE L1 -310 5856 5254 779 197 0 0 chr17 36817427 36817554 -48620926 + FLAM_C SINE Alu 1 127 -16 4721 256 42 29 chr17 36817560 36819340 -48619140 - L1ME1 LINE L1 -905 5241 3438 358 309 8 40 chr17 36821007 36821133 -48617347 + MIR3 SINE MIR 72 193 -15 2213 121 0 7 chr17 36821170 36821476 -48617004 + AluSg SINE Alu 1 304 -6 4830 87 2 2 chr17 36823973 36824607 -48613873 - THE1B-int LTR MaLR -946 634 1 1979 144 18 85 chr17 36824607 36824649 -48613831 - THE1B LTR MaLR 0 364 321 207 0 0 0 chr17 36824649 36824672 -48613808 + (CAA)n Simple_repeat Simple_repeat 2 24 0 1979 144 18 85 chr17 36824672 36825019 -48613461 - THE1B LTR MaLR -43 321 1 255 286 0 26 chr17 36825434 36825511 -48612969 - MIR3 SINE MIR -34 174 100 221 186 0 0 chr17 36826887 36826930 -48611550 - L2 LINE L2 -4 3309 3267 513 179 0 0 chr17 36827076 36827154 -48611326 - AluJ/FLAM SINE Alu -233 79 2 2203 133 10 0 chr17 36827205 36827514 -48610966 - AluSx SINE Alu 0 312 1 240 35 0 0 chr17 36827532 36827561 -48610919 + (TTTA)n Simple_repeat Simple_repeat 3 31 0 1630 197 7 0 chr17 36827563 36827842 -48610638 - AluJb SINE Alu -31 281 1 1432 159 45 98 chr17 36827848 36828210 -48610270 - L1MB7 LINE L1 -11 6173 5830 2393 205 6 28 chr17 36828210 36828707 -48609773 - MER66B LTR ERV1 0 486 1 1432 159 45 98 chr17 36828707 36828722 -48609758 - L1MB7 LINE L1 -354 5830 5816 1778 149 0 64 chr17 36828722 36829051 -48609429 - AluSx SINE Alu 0 312 5 295 202 90 11 chr17 36829404 36829493 -48608987 - MLT1J2 LTR MaLR 0 450 355 388 248 52 60 chr17 36829498 36829707 -48608773 - MLT1I LTR MaLR -140 310 71 301 312 21 0 chr17 36829751 36829844 -48608636 - MIR3 SINE MIR -110 98 4 240 319 55 11 chr17 36833394 36833485 -48604995 - L2 LINE L2 -10 3262 3168 1356 278 53 55 chr17 36834655 36834724 -48603756 - L2 LINE L2 -1 3312 3244 2135 142 0 3 chr17 36834724 36835033 -48603447 - AluSx SINE Alu -4 308 1 1356 278 53 55 chr17 36835033 36835724 -48602756 - L2 LINE L2 -69 3244 2553 197 261 0 0 chr17 36836460 36836506 -48601974 + MIR SINE MIR 161 206 -56 302 250 70 47 chr17 36836628 36836756 -48601724 - L2 LINE L2 -4 3309 3179 1832 103 0 11 chr17 36837173 36837470 -48601010 - AluY SINE Alu 0 317 24 1326 219 84 22 chr17 36837528 36837885 -48600595 - MLT1B LTR MaLR -11 379 1 269 336 69 23 chr17 36837951 36838082 -48600398 + L2 LINE L2 2956 3092 -180 2148 117 14 0 chr17 36838313 36838603 -48599877 - AluSx SINE Alu -18 294 1 209 250 0 0 chr17 36839330 36839378 -48599102 + C-rich Low_complexity Low_complexity 1 48 0 1788 113 0 79 chr17 36840568 36840860 -48597620 + AluSx SINE Alu 29 297 -15 257 288 14 0 chr17 36840861 36840934 -48597546 + MIR SINE MIR 152 225 -37 1372 195 26 15 chr17 36841734 36842006 -48596474 + AluJb SINE Alu 5 279 -33 2622 37 0 0 chr17 36842015 36842312 -48596168 - AluY SINE Alu -14 297 1 808 235 0 19 chr17 36842938 36843100 -48595380 + FRAM SINE Alu 5 163 -3 267 193 88 0 chr17 36843106 36843163 -48595317 + AluSp SINE Alu 131 192 -111 971 85 0 8 chr17 36843166 36843296 -48595184 + Tigger1 DNA MER2_type 1330 1458 -960 1872 111 0 37 chr17 36843296 36843594 -48594886 - AluSx SINE Alu -19 293 7 1690 108 127 19 chr17 36843609 36843877 -48594603 - AluSg1 SINE Alu -12 297 1 3450 102 14 10 chr17 36844020 36844522 -48593958 - L1P LINE L1 -1131 5015 4512 4791 75 7 8 chr17 36844522 36845128 -48593352 + L1PA7 LINE L1 5544 6154 0 326 252 117 18 chr17 36845129 36845240 -48593240 - L2 LINE L2 -26 3287 3166 402 283 57 98 chr17 36845317 36845758 -48592722 + L2 LINE L2 2868 3290 -23 204 67 0 0 chr17 36845811 36845841 -48592639 + (TG)n Simple_repeat Simple_repeat 1 30 0 399 350 164 15 chr17 36846004 36846413 -48592067 + L2 LINE L2 2265 2734 -580 282 293 78 66 chr17 36846461 36846628 -48591852 + L2 LINE L2 2877 3045 -227 610 235 63 99 chr17 36846826 36847047 -48591433 - MIR SINE MIR -2 260 48 2097 142 0 3 chr17 36847478 36847788 -48590692 + AluSx SINE Alu 1 309 -3 258 215 177 0 chr17 36848291 36848370 -48590110 + L2 LINE L2 3208 3300 -13 1550 143 25 45 chr17 36849198 36849484 -48588996 + AluJo SINE Alu 1 280 -32 747 279 183 54 chr17 36849776 36850449 -48588031 + L2 LINE L2 2302 3047 -266 482 259 9 9 chr17 36851077 36851193 -48587287 - MIR SINE MIR -146 116 1 473 304 113 48 chr17 36851273 36851687 -48586793 - L3 LINE CR1 -99 1478 1038 431 240 96 19 chr17 36851890 36851994 -48586486 + MIR3 SINE MIR 46 157 -51 336 268 82 42 chr17 36852059 36852224 -48586256 - MIR SINE MIR -61 201 34 452 168 11 21 chr17 36853558 36853653 -48584827 - L1M4 LINE L1 -960 5186 5093 465 67 17 0 chr17 36853656 36853716 -48584764 - AluJ/FLAM SINE Alu -250 62 2 1306 168 21 144 chr17 36853871 36853981 -48584499 - L1M4 LINE L1 -1124 5022 4900 2387 87 7 0 chr17 36853981 36854281 -48584199 - AluY SINE Alu -9 302 1 1306 168 21 144 chr17 36854281 36854594 -48583886 - L1M4 LINE L1 -1246 4900 4651 * 4255 196 41 56 chr17 36854593 36854834 -48583646 - L1M4 LINE L1 -1889 4257 4014 2069 138 0 0 chr17 36854834 36855130 -48583350 - AluJb SINE Alu -16 296 1 4255 196 41 56 chr17 36855130 36855412 -48583068 - L1M4 LINE L1 -2132 4014 3729 1876 156 0 23 chr17 36855412 36855720 -48582760 - AluSx SINE Alu -11 301 1 4255 196 41 56 chr17 36855720 36856137 -48582343 - L1M4 LINE L1 -2417 3729 3307 216 0 0 0 chr17 36856137 36856161 -48582319 + (TG)n Simple_repeat Simple_repeat 1 24 0 1945 129 7 0 chr17 36856161 36856441 -48582039 - AluSx SINE Alu -30 282 1 4255 196 41 56 chr17 36856441 36856672 -48581808 - L1M4 LINE L1 -2837 3309 3101 1787 84 0 13 chr17 36857203 36857441 -48581039 + AluSq SINE Alu 77 311 -2 446 239 153 45 chr17 36857529 36857647 -48580833 + MIR SINE MIR 49 194 -68 1937 204 49 10 chr17 36857647 36858054 -48580426 - MSTB LTR MaLR 0 426 4 446 239 153 45 chr17 36858054 36858111 -48580369 + MIR SINE MIR 194 243 -19 326 287 55 66 chr17 36858133 36858314 -48580166 - MIR SINE MIR -56 206 28 547 191 127 25 chr17 36859579 36859736 -48578744 - MIR SINE MIR -70 192 20 180 0 0 0 chr17 36860765 36860785 -48577695 + (TG)n Simple_repeat Simple_repeat 2 21 0 2941 72 23 48 chr17 36861032 36861465 -48577015 + L1PA6 LINE L1 5733 6154 0 210 71 0 0 chr17 36861867 36861895 -48576585 + (GA)n Simple_repeat Simple_repeat 1 28 0 284 263 92 0 chr17 36862194 36862270 -48576210 + L2 LINE L2 3231 3313 0 350 243 0 14 chr17 36862272 36862342 -48576138 + L2 LINE L2 3204 3272 0 2466 55 0 19 chr17 36863197 36863508 -48574972 + AluY SINE Alu 1 305 -6 24 0 0 0 chr17 36865283 36865307 -48573173 + AT_rich Low_complexity Low_complexity 1 24 0 442 253 82 41 chr17 36865996 36866166 -48572314 + MER104 DNA MER2_type 1 177 -3 625 343 48 30 chr17 36866346 36866743 -48571737 - L2 LINE L2 -420 2894 2491 366 334 45 28 chr17 36869548 36869714 -48568766 + MIR SINE MIR 8 174 -62 875 222 88 5 chr17 36869911 36870105 -48568375 - MIR SINE MIR -46 216 7 184 213 43 21 chr17 36870140 36870187 -48568293 - L2 LINE L2 -3 3310 3263 315 0 0 0 chr17 36875876 36875909 -48562571 + (CA)n Simple_repeat Simple_repeat 1 68 0 315 0 0 0 chr17 36875909 36875944 -48562536 + (CA)n Simple_repeat Simple_repeat 2 36 0 438 106 0 0 chr17 36877531 36877597 -48560883 - L1MB5 LINE L1 -6 6168 6103 279 0 0 0 chr17 36878849 36878880 -48559600 + (TG)n Simple_repeat Simple_repeat 1 31 0 26 50 0 0 chr17 36879093 36879133 -48559347 + GC_rich Low_complexity Low_complexity 1 40 0 182 105 26 0 chr17 36879207 36879245 -48559235 + (CCCCG)n Simple_repeat Simple_repeat 1 39 0 1050 146 29 6 chr17 36881441 36881612 -48556868 - AluJb SINE Alu -51 261 87 529 324 48 9 chr17 36881778 36881988 -48556492 + MIR SINE MIR 35 252 -10 2396 91 0 3 chr17 36881995 36882302 -48556178 + AluSx SINE Alu 1 306 -6 883 161 6 52 chr17 36883802 36883976 -48554504 + FRAM SINE Alu 1 166 0 2108 106 14 3 chr17 36884006 36884319 -48554161 + AluSx SINE Alu 1 316 0 180 0 0 0 chr17 36884326 36884346 -48554134 + (GA)n Simple_repeat Simple_repeat 1 20 0 1292 172 5 0 chr17 36884355 36884553 -48553927 - AluJb SINE Alu -27 285 87 370 239 238 1 chr17 36884560 36884749 -48553731 - MIR SINE MIR -11 251 20 871 168 0 14 chr17 36885337 36885480 -48553000 - AluJb SINE Alu -16 296 156 293 509 39 0 chr17 36885538 36885697 -48552783 + AluJ/monomer SINE Alu 1 36 -267 1512 99 12 129 chr17 36885740 36885822 -48552658 + Tigger1 DNA MER2_type 1512 1602 -816 2178 111 0 3 chr17 36885822 36886110 -48552370 + AluSx SINE Alu 7 293 -19 1512 99 12 129 chr17 36886110 36886360 -48552120 + Tigger1 DNA MER2_type 1602 1805 -613 681 172 0 39 chr17 36886360 36886488 -48551992 - FLAM_A SINE Alu -17 125 3 3453 130 46 28 chr17 36886491 36886786 -48551694 + Tigger1 DNA MER2_type 1798 2086 -332 2564 60 0 3 chr17 36886786 36887087 -48551393 + AluY SINE Alu 1 300 -11 3453 130 46 28 chr17 36887087 36887399 -48551081 + Tigger1 DNA MER2_type 2086 2416 -2 216 369 43 7 chr17 36887436 36887577 -48550903 + L3b LINE CR1 1298 1443 -140 213 121 0 0 chr17 36889487 36889520 -48548960 + (T)n Simple_repeat Simple_repeat 1 33 0 222 171 0 0 chr17 36889863 36889904 -48548576 + (CA)n Simple_repeat Simple_repeat 2 42 0 2165 105 7 10 chr17 36890749 36891043 -48547437 - AluSg SINE Alu -15 295 3 21 0 0 0 chr17 36891996 36892017 -48546463 + AT_rich Low_complexity Low_complexity 1 21 0 2140 119 10 16 chr17 36894396 36894708 -48543772 - AluSg SINE Alu 0 310 1 1329 196 13 27 chr17 36894976 36895277 -48543203 + AluSq SINE Alu 5 301 -12 508 331 73 25 chr17 36895473 36895829 -48542651 + L2 LINE L2 2879 3251 -62 327 291 39 19 chr17 36895885 36895988 -48542492 - L3 LINE CR1 -150 1427 1323 193 262 33 74 chr17 36896023 36896145 -48542335 - L2 LINE L2 -335 2978 2862 282 264 94 71 chr17 36896248 36896460 -48542020 - L3 LINE CR1 -259 1318 1102 2136 113 0 3 chr17 36896838 36897157 -48541323 - AluSg SINE Alu 0 318 1 315 0 0 0 chr17 36897341 36897376 -48541104 + (CA)n Simple_repeat Simple_repeat 1 35 0 195 155 119 107 chr17 36897536 36897620 -48540860 + MIR SINE MIR 70 154 -108 2270 88 41 3 chr17 36898076 36898371 -48540109 - AluSx SINE Alu -6 306 1 278 140 0 35 chr17 36898795 36898852 -48539628 + FLAM SINE Alu 57 111 -22 478 138 23 23 chr17 36898945 36899032 -48539448 + L2 LINE L2 3225 3311 -2 380 243 59 55 chr17 36899214 36899363 -48539117 - MIR SINE MIR -68 140 1 600 247 47 26 chr17 36899489 36899679 -48538801 - MLT1L LTR MaLR 0 615 422 2424 87 7 3 chr17 36899687 36899996 -48538484 - AluSg SINE Alu 0 310 1 2110 120 0 7 chr17 36899999 36900317 -48538163 - AluSg SINE Alu 0 316 1 2442 83 0 3 chr17 36900317 36900629 -48537851 - AluY SINE Alu 0 311 1 1689 161 34 7 chr17 36900629 36900920 -48537560 - AluJb SINE Alu -13 299 1 2042 116 0 20 chr17 36900931 36901234 -48537246 - AluSx SINE Alu -2 310 14 521 208 179 48 chr17 36901263 36901470 -48537010 - MLT1L LTR MaLR -341 274 41 2021 126 10 0 chr17 36902639 36903026 -48535454 + AluSp SINE Alu 1 390 0 852 249 23 34 chr17 36903036 36903301 -48535179 - AluJo SINE Alu -46 266 5 337 226 113 17 chr17 36903735 36903850 -48534630 - MER5A DNA MER1_type 0 189 64 192 135 0 0 chr17 36904362 36904399 -48534081 + (TCCCC)n Simple_repeat Simple_repeat 1 37 0 183 42 0 0 chr17 36905029 36905053 -48533427 + (T)n Simple_repeat Simple_repeat 1 24 0 211 187 0 107 chr17 36906532 36906607 -48531873 + A-rich Low_complexity Low_complexity 1 67 0 213 211 42 0 chr17 36906680 36906751 -48531729 + (TA)n Simple_repeat Simple_repeat 1 74 0 3730 123 2 5 chr17 36906911 36907470 -48531010 + THE1B-int LTR MaLR 1024 1580 0 920 179 17 12 chr17 36907470 36907643 -48530837 + THE1B LTR MaLR 1 174 -190 324 308 231 18 chr17 36907914 36908356 -48530124 + L2 LINE L2 1744 2279 -1035 416 327 77 70 chr17 36909211 36909811 -48528669 + L2 LINE L2 2670 3270 -2 180 0 0 0 chr17 36912214 36912234 -48526246 + (TAAAAA)n Simple_repeat Simple_repeat 5 24 0 182 179 107 18 chr17 36912905 36912961 -48525519 + L2 LINE L2 2698 2758 -556 872 233 48 12 chr17 36913541 36913790 -48524690 - MIR SINE MIR 0 262 5 205 29 29 29 chr17 36915686 36915721 -48522759 + (TTTTA)n Simple_repeat Simple_repeat 2 36 0 1498 164 29 74 chr17 36915735 36915927 -48522553 - AluJb SINE Alu -16 296 122 195 69 0 0 chr17 36915927 36915956 -48522524 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 1498 164 29 74 chr17 36915956 36916073 -48522407 - AluJb SINE Alu -190 122 1 396 271 8 17 chr17 36916378 36916496 -48521984 - MIR SINE MIR -99 163 47 482 330 33 41 chr17 36916510 36916780 -48521700 - MER102b DNA MER1_type -1 340 73 185 211 0 0 chr17 36916865 36916903 -48521577 - MIR SINE MIR -224 38 1 301 308 267 0 chr17 36916932 36917127 -48521353 - L3 LINE CR1 -212 1365 1119 440 297 109 0 chr17 36918752 36918917 -48519563 + MIR3 SINE MIR 1 183 -25 236 303 63 42 chr17 36921565 36921707 -48516773 - MIR3 SINE MIR -11 197 53 332 246 203 7 chr17 36922005 36922143 -48516337 - MIR SINE MIR -63 199 35 2073 135 0 3 chr17 36924397 36924709 -48513771 - AluJb SINE Alu -1 311 1 2911 199 47 3 chr17 36925600 36926257 -48512223 - L1 LINE L1 -847 5299 4614 266 351 50 11 chr17 36926268 36926547 -48511933 - L3 LINE CR1 -118 1459 1170 337 344 8 0 chr17 36926768 36926893 -48511587 - L3 LINE CR1 -406 1171 1046 1813 152 10 13 chr17 36926919 36927228 -48511252 - AluSx SINE Alu -4 308 1 313 299 171 11 chr17 36927236 36927423 -48511057 - MIR SINE MIR -26 236 20 470 357 77 21 chr17 36927882 36928563 -48509917 + L2 LINE L2 2554 3269 -3 241 266 43 14 chr17 36928822 36928961 -48509519 - L1ME4a LINE L1 -3 6118 5976 361 255 80 21 chr17 36928966 36929154 -48509326 - L1ME4a LINE L1 -216 5905 5707 433 301 8 8 chr17 36929838 36929961 -48508519 - MER5B DNA MER1_type -52 126 4 208 95 16 0 chr17 36930152 36930191 -48508289 + MIR SINE MIR 114 152 -110 588 106 24 0 chr17 36930853 36930938 -48507542 - AluS SINE Alu -223 89 3 1890 130 18 0 chr17 36930945 36931229 -48507251 - AluSx SINE Alu -21 291 3 180 188 0 0 chr17 36931358 36931390 -48507090 - L2 LINE L2 -19 3294 3263 330 198 198 0 chr17 36931413 36931504 -48506976 - MIR SINE MIR -63 145 37 205 326 11 22 chr17 36931496 36931585 -48506895 + L2 LINE L2 3184 3271 -1 * 281 308 33 0 chr17 36932291 36932382 -48506098 + C-rich Low_complexity Low_complexity 4 97 0 1882 126 3 10 chr17 36932885 36933178 -48505302 - AluJo SINE Alu -21 291 1 551 321 106 17 chr17 36933321 36933726 -48504754 - L2 LINE L2 -2 3270 2830 189 333 111 0 chr17 36933788 36933869 -48504611 - L2 LINE L2 -710 2604 2515 260 347 25 33 chr17 36933916 36934037 -48504443 - MIR SINE MIR -82 180 61 1605 139 4 0 chr17 36934636 36934881 -48503599 - AluSx SINE Alu -66 246 1 704 168 0 60 chr17 36934881 36935030 -48503450 - AluJo SINE Alu -171 141 2 189 143 61 41 chr17 36935030 36935079 -48503401 + MIR SINE MIR 113 162 -100 380 198 37 0 chr17 36935251 36935332 -48503148 - L2 LINE L2 -13 3259 3176 284 252 221 0 chr17 36935449 36935580 -48502900 + MIR3 SINE MIR 30 189 -19 711 226 53 21 chr17 36936173 36936363 -48502117 + MIR SINE MIR 11 206 -56 194 302 95 74 chr17 36939529 36939718 -48498762 + MIR SINE MIR 67 259 -3 856 275 171 37 chr17 36940492 36940925 -48497555 - LTR33A LTR ERVL -6 517 27 223 331 54 54 chr17 36941843 36942121 -48496359 - L2 LINE L2 -493 2821 2544 236 363 67 22 chr17 36943257 36943392 -48495088 + L2 LINE L2 3125 3265 -7 719 257 21 16 chr17 36943436 36943623 -48494857 + MIR SINE MIR 61 248 -14 508 278 85 6 chr17 36944335 36944511 -48493969 - MIR SINE MIR 0 262 73 258 136 0 0 chr17 36944628 36944672 -48493808 + (TGGA)n Simple_repeat Simple_repeat 1 44 0 213 316 0 0 chr17 36945369 36945448 -48493032 + (TG)n Simple_repeat Simple_repeat 2 80 0 1138 130 0 6 chr17 36946172 36946349 -48492131 + AluSg/x SINE Alu 131 306 -4 364 300 56 44 chr17 36946386 36946546 -48491934 - MIR SINE MIR -76 186 25 1884 128 16 16 chr17 36946650 36946955 -48491525 - AluJb SINE Alu -7 305 1 219 325 215 5 chr17 36947953 36948153 -48490327 - L2 LINE L2 -376 2938 2697 2228 85 0 13 chr17 36948166 36948473 -48490007 + AluSg SINE Alu 1 303 -7 810 178 0 14 chr17 36948483 36948629 -48489851 + FRAM SINE Alu 11 154 -22 2509 46 0 3 chr17 36948745 36949049 -48489431 + AluY SINE Alu 1 303 -8 21 0 0 0 chr17 36950646 36950667 -48487813 + GC_rich Low_complexity Low_complexity 1 21 0 243 311 175 28 chr17 36950933 36951258 -48487222 + L2 LINE L2 2449 2821 -493 286 339 182 29 chr17 36951414 36951656 -48486824 + L2 LINE L2 2992 3270 -2 226 298 48 0 chr17 36952232 36952316 -48486164 + L3 LINE CR1 1323 1410 -167 2025 95 0 18 chr17 36952397 36952712 -48485768 - AluSx SINE Alu 0 314 5 1326 172 66 90 chr17 36952884 36953261 -48485219 + MLT1A2 LTR MaLR 1 368 -6 510 234 150 6 chr17 36953368 36953535 -48484945 + MIR SINE MIR 69 259 -3 1994 129 7 7 chr17 36953757 36954059 -48484421 - AluSx SINE Alu -10 302 1 1747 139 7 13 chr17 36954402 36954705 -48483775 + AluJo SINE Alu 5 305 -7 448 257 46 33 chr17 36955409 36955561 -48482919 + MIR SINE MIR 98 251 -11 535 305 144 35 chr17 36956083 36956384 -48482096 + L2 LINE L2 1314 1581 -1732 1970 125 0 11 chr17 36956384 36956702 -48481778 - AluJb SINE Alu 0 315 1 535 305 144 35 chr17 36956702 36957049 -48481431 + L2 LINE L2 1581 3313 0 473 219 7 44 chr17 36957072 36957134 -48481346 - L1M4 LINE L1 -2472 3674 3611 2064 112 10 10 chr17 36957134 36957439 -48481041 - AluSg SINE Alu -5 305 1 473 219 7 44 chr17 36957439 36957513 -48480967 - L1M4 LINE L1 -2535 3611 3543 50 80 0 0 chr17 36957513 36957626 -48480854 + AT_rich Low_complexity Low_complexity 1 113 0 1443 222 55 20 chr17 36957626 36957865 -48480615 - L1M4 LINE L1 -2579 3567 3338 2271 94 0 0 chr17 36957865 36958172 -48480308 + AluY SINE Alu 1 307 -4 1443 222 55 20 chr17 36958172 36958383 -48480097 - L1M4 LINE L1 -2808 3338 3101 718 250 38 22 chr17 36958409 36958593 -48479887 - MIR SINE MIR -74 188 2 304 315 0 11 chr17 36960539 36960631 -48477849 + G-rich Low_complexity Low_complexity 3 93 0 352 263 134 28 chr17 36962262 36962509 -48475971 + HAL1 LINE L1 1361 1633 -874 1891 117 3 11 chr17 36962512 36962795 -48475685 - AluSx SINE Alu -13 299 19 932 197 0 0 chr17 36962985 36963163 -48475317 - FRAM SINE Alu -3 173 1 2173 125 0 0 chr17 36963286 36963591 -48474889 + AluSq SINE Alu 1 305 -8 2023 133 0 9 chr17 36963952 36964267 -48474213 + AluSx SINE Alu 1 312 0 429 277 75 6 chr17 36964304 36964463 -48474017 + MIR SINE MIR 88 257 -5 616 175 162 32 chr17 36964892 36965046 -48473434 - AluJb SINE Alu 0 312 139 480 226 93 3 chr17 36965163 36965331 -48473149 - MIR SINE MIR -23 239 52 921 210 28 6 chr17 36965350 36965531 -48472949 + MER20 DNA MER1_type 31 215 -4 260 274 0 49 chr17 36965645 36965747 -48472733 + MIR SINE MIR 33 129 -79 1595 152 57 17 chr17 36966001 36966297 -48472183 + AluJb SINE Alu 1 308 -4 582 188 39 16 chr17 36966943 36967071 -48471409 + MIR SINE MIR 21 151 -111 430 238 20 0 chr17 36968323 36968424 -48470056 - MER91A DNA MER1_type -93 103 1 946 106 0 7 chr17 36968522 36968686 -48469794 + AluSg/x SINE Alu 154 312 0 266 269 32 43 chr17 36969225 36969318 -48469162 - MIR3 SINE MIR -32 176 85 392 370 105 24 chr17 36969908 36970327 -48468153 + L1M3 LINE L1 4617 5069 -1077 2037 132 0 22 chr17 36970410 36970729 -48467751 + AluSx SINE Alu 1 312 0 2339 102 0 0 chr17 36970742 36971055 -48467425 + AluSq SINE Alu 1 313 0 372 283 47 34 chr17 36971081 36971364 -48467116 + L1M3 LINE L1 5191 5451 -729 422 178 0 0 chr17 36971388 36971461 -48467019 + AluJ/FLAM SINE Alu 5 77 -235 2032 124 11 0 chr17 36971566 36971849 -48466631 - AluSx SINE Alu -26 286 1 756 287 73 21 chr17 36971854 36972237 -48466243 + L1MC4a LINE L1 5464 5819 -302 1183 163 39 5 chr17 36972269 36972472 -48466008 - MER63A DNA MER1_type 0 210 1 753 239 64 14 chr17 36972568 36972786 -48465694 + MIR SINE MIR 2 230 -32 180 0 0 0 chr17 36972885 36972905 -48465575 + (A)n Simple_repeat Simple_repeat 1 20 0 1742 146 7 39 chr17 36972909 36973217 -48465263 + AluJo SINE Alu 7 304 -8 759 293 55 65 chr17 36973725 36974095 -48464385 + L2 LINE L2 2914 3281 -32 979 159 53 92 chr17 36974095 36974322 -48464158 + MER20 DNA MER1_type 1 218 -1 759 293 55 65 chr17 36974322 36974354 -48464126 + L2 LINE L2 3281 3312 -1 694 242 91 25 chr17 36976204 36976402 -48462078 + MER58C DNA MER1_type 5 215 0 218 260 68 68 chr17 36976408 36976554 -48461926 + L2 LINE L2 2919 3064 -208 311 250 95 60 chr17 36977099 36977267 -48461213 + MIR3 SINE MIR 27 200 -8 930 169 25 6 chr17 36977690 36977850 -48460630 - AluJo SINE Alu -18 294 132 1211 148 33 102 chr17 36977891 36978027 -48460453 + AluSx SINE Alu 21 126 -186 2521 43 0 3 chr17 36978027 36978331 -48460149 + AluY SINE Alu 1 303 -8 1211 148 33 102 chr17 36978331 36978498 -48459982 + AluSx SINE Alu 126 303 -9 749 171 0 24 chr17 36978500 36978623 -48459857 - AluJo SINE Alu -189 123 4 1910 128 0 16 chr17 36978641 36978816 -48459664 - AluSx SINE Alu -4 308 139 2430 62 0 3 chr17 36978816 36979120 -48459360 - AluY SINE Alu -8 303 1 1910 128 0 16 chr17 36979120 36979257 -48459223 - AluSx SINE Alu -173 139 1 382 364 8 0 chr17 36979257 36979389 -48459091 + L3 LINE CR1 1370 1502 -75 366 287 31 23 chr17 36980140 36980269 -48458211 + MIR SINE MIR 16 145 -117 2170 82 14 10 chr17 36980770 36981064 -48457416 + AluSc SINE Alu 1 295 -14 213 280 151 0 chr17 36981447 36981540 -48456940 - MIR SINE MIR -87 175 69 34 42 0 0 chr17 36981779 36981827 -48456653 + GC_rich Low_complexity Low_complexity 1 48 0 443 325 107 14 chr17 36982249 36982594 -48455886 + L2 LINE L2 1735 2111 -1203 574 165 116 0 chr17 36982648 36982769 -48455711 + MER20 DNA MER1_type 85 219 0 189 0 0 0 chr17 36982805 36982826 -48455654 + (TCTCC)n Simple_repeat Simple_repeat 1 21 0 1030 317 154 12 chr17 36982826 36983800 -48454680 + L2 LINE L2 2165 3272 0 234 316 61 18 chr17 36984105 36984219 -48454261 + MIR3 SINE MIR 66 184 -24 2168 118 0 9 chr17 36985273 36985588 -48452892 + AluSq SINE Alu 1 312 -1 486 294 68 6 chr17 36986025 36986188 -48452292 - MIR SINE MIR -70 192 20 2129 86 0 54 chr17 36986245 36986560 -48451920 + AluSx SINE Alu 1 298 -14 566 293 46 13 chr17 36986590 36986784 -48451696 - MIR SINE MIR -33 229 33 379 356 114 17 chr17 36986885 36987121 -48451359 + L2 LINE L2 2540 2798 -516 2335 104 0 0 chr17 36988117 36988424 -48450056 + AluSx SINE Alu 1 307 -5 441 197 0 0 chr17 36988469 36988535 -48449945 + AluJ/FLAM SINE Alu 3 68 -244 2155 94 0 10 chr17 36988535 36988832 -48449648 + AluSx SINE Alu 1 294 -18 188 284 0 75 chr17 36988992 36989059 -48449421 - L2 LINE L2 -72 3241 3180 215 274 0 0 chr17 36990488 36990539 -48447941 + L2 LINE L2 3143 3193 -79 319 324 123 20 chr17 36991220 36991464 -48447016 + L2 LINE L2 2910 3178 -94 322 276 8 0 chr17 36991504 36991766 -48446714 + GA-rich Low_complexity Low_complexity 1 264 0 189 0 0 0 chr17 36991773 36991794 -48446686 + (TGGA)n Simple_repeat Simple_repeat 3 23 0 186 209 0 0 chr17 36991890 36991933 -48446547 + (TGGA)n Simple_repeat Simple_repeat 3 45 0 231 61 0 0 chr17 36995113 36995146 -48443334 + (TG)n Simple_repeat Simple_repeat 1 33 0 343 302 72 36 chr17 36996826 36996890 -48441590 - L2 LINE L2 -6 3266 3206 2257 105 0 7 chr17 36996890 36997194 -48441286 + AluSx SINE Alu 1 302 -10 2183 82 14 7 chr17 36997194 36997487 -48440993 + AluSg SINE Alu 1 295 -15 343 302 72 36 chr17 36997487 36997560 -48440920 - L2 LINE L2 -65 3207 3123 288 349 40 26 chr17 36999356 36999508 -48438972 - MIR3 SINE MIR -14 194 41 327 358 51 11 chr17 37000524 37000700 -48437780 - MIR3 SINE MIR -18 190 8 211 298 0 0 chr17 37001617 37001630 -48436850 - L2 LINE L2 0 3313 3301 185 65 32 0 chr17 37001630 37001661 -48436819 + (CAGTT)n Simple_repeat Simple_repeat 2 33 0 211 298 0 0 chr17 37001661 37001704 -48436776 - L2 LINE L2 -11 3302 3257 421 330 12 0 chr17 37001757 37001930 -48436550 + (CA)n Simple_repeat Simple_repeat 1 175 0 232 265 12 24 chr17 37001979 37002062 -48436418 + (CA)n Simple_repeat Simple_repeat 1 82 0 610 82 206 10 chr17 37002203 37002300 -48436180 + AluSg SINE Alu 1 116 -194 1784 83 79 4 chr17 37002300 37002552 -48435928 + AluSg SINE Alu 22 292 -18 246 370 71 49 chr17 37003308 37003532 -48434948 + L3 LINE CR1 1286 1514 -63 278 265 48 0 chr17 37004220 37004303 -48434177 - L3b LINE CR1 -174 1409 1323 437 279 102 0 chr17 37005261 37005408 -48433072 - MIR SINE MIR -55 207 46 409 238 177 30 chr17 37006676 37006862 -48431618 + MIR SINE MIR 34 251 -11 198 0 0 0 chr17 37006873 37006895 -48431585 + (CAT)n Simple_repeat Simple_repeat 3 24 0 378 335 86 10 chr17 37006913 37007122 -48431358 + MIR SINE MIR 26 250 -12 699 297 113 3 chr17 37007250 37007587 -48430893 - MLT1K LTR MaLR -9 579 206 588 270 75 11 chr17 37008126 37008300 -48430180 + MIR3 SINE MIR 21 205 -3 480 292 114 52 chr17 37008591 37008819 -48429661 - MIR SINE MIR -31 231 1 766 256 134 25 chr17 37008869 37009146 -48429334 - L2 LINE L2 -1 3312 3006 602 296 59 10 chr17 37009164 37009376 -48429104 + MIR SINE MIR 37 261 -1 241 245 43 53 chr17 37009475 37009569 -48428911 + MIR3 SINE MIR 11 103 -105 358 287 60 8 chr17 37009672 37009803 -48428677 + MIR SINE MIR 57 192 -35 478 254 99 22 chr17 37010373 37010554 -48427926 + MIR3 SINE MIR 7 201 -7 1408 278 102 24 chr17 37011516 37012266 -48426214 + L2 LINE L2 2436 3251 -62 507 303 74 6 chr17 37012428 37012590 -48425890 + MIR3 SINE MIR 31 203 -5 349 266 61 3 chr17 37012643 37012766 -48425714 + MIR SINE MIR 21 153 -63 251 247 14 14 chr17 37012980 37013053 -48425427 - L1M4 LINE L1 -1339 4807 4735 1948 145 0 7 chr17 37014326 37014630 -48423850 + AluJb SINE Alu 1 302 -10 222 318 208 5 chr17 37014737 37014929 -48423551 - L3 LINE CR1 -174 1403 1173 635 314 12 58 chr17 37015137 37015286 -48423194 + MIR SINE MIR 12 147 -115 2123 118 3 0 chr17 37015286 37015582 -48422898 + AluSx SINE Alu 2 298 -14 635 314 12 58 chr17 37015582 37015674 -48422806 + MIR SINE MIR 147 242 -20 511 318 108 40 chr17 37015763 37016087 -48422393 + L2 LINE L2 2926 3271 -1 864 331 21 7 chr17 37016100 37016384 -48422096 - L3 LINE CR1 -682 895 608 383 365 0 0 chr17 37016403 37016540 -48421940 - MIR SINE MIR -3 259 123 1276 241 62 13 chr17 37016543 37016917 -48421563 + MLT1J1 LTR MaLR 52 443 -3 228 313 50 20 chr17 37016952 37017051 -48421429 - MIR SINE MIR -128 134 33 1023 201 11 0 chr17 37017517 37017691 -48420789 - MER45A DNA AcHobo -2 176 1 1071 161 0 0 chr17 37218371 37218551 -48219929 - AluJb SINE Alu -121 191 12 23 0 0 0 chr17 37218561 37218584 -48219896 + AT_rich Low_complexity Low_complexity 1 23 0 1957 135 10 0 chr17 37218587 37218891 -48219589 - AluSq SINE Alu -6 307 1 1688 158 3 7 chr17 37218893 37219196 -48219284 - AluSp SINE Alu -10 303 2 881 128 0 0 chr17 37219200 37219333 -48219147 - FLAM_C SINE Alu 0 133 1 200 231 0 0 chr17 37219413 37219452 -48219028 - MIR SINE MIR -8 254 216 2009 123 20 0 chr17 37220724 37221026 -48217454 + AluSx SINE Alu 1 308 -4 1923 57 21 39 chr17 37221028 37221311 -48217169 + AluY SINE Alu 23 300 -11 23 62 0 0 chr17 37223117 37223149 -48215331 + GC_rich Low_complexity Low_complexity 1 32 0 244 241 0 0 chr17 37224164 37224222 -48214258 + A-rich Low_complexity Low_complexity 1 58 0 1461 194 7 33 chr17 37225021 37225325 -48213155 + AluJo SINE Alu 2 297 -5 198 103 0 0 chr17 37225325 37225354 -48213126 + (TA)n Simple_repeat Simple_repeat 2 30 0 26 0 0 0 chr17 37225359 37225385 -48213095 + AT_rich Low_complexity Low_complexity 1 26 0 401 151 0 27 chr17 37225392 37225465 -48213015 + AluS SINE Alu 2 72 -240 1662 95 3 88 chr17 37225526 37225678 -48212802 - AluSx SINE Alu -41 271 154 1964 91 18 7 chr17 37225678 37225963 -48212517 - AluSg SINE Alu -22 288 1 1662 95 3 88 chr17 37225963 37226106 -48212374 - AluSx SINE Alu -158 154 1 1692 128 6 44 chr17 37226108 37226428 -48212052 - AluSx SINE Alu -2 310 3 29 0 0 0 chr17 37226428 37226457 -48212023 + AT_rich Low_complexity Low_complexity 1 29 0 1406 148 0 47 chr17 37226535 37226852 -48211628 - AluSq SINE Alu -11 302 1 1021 256 13 4 chr17 37227307 37227541 -48210939 + MER8 DNA MER2_type 1 236 -3 1367 146 47 53 chr17 37227667 37227968 -48210512 - AluSc SINE Alu -10 299 1 277 219 31 16 chr17 37228044 37228108 -48210372 - MER81 DNA DNA 0 114 50 612 186 0 0 chr17 37228510 37228612 -48209868 + AluSg/x SINE Alu 192 293 -19 1926 101 18 4 chr17 37228619 37228896 -48209584 - AluSx SINE Alu -31 281 1 213 352 62 22 chr17 37229568 37229747 -48208733 - L2 LINE L2 -788 2526 2341 256 170 21 21 chr17 37230123 37230170 -48208310 + Alu SINE Alu 1 47 -254 406 214 0 10 chr17 37230272 37230370 -48208110 + AluSg/x SINE Alu 201 297 -13 2354 77 0 3 chr17 37230370 37230682 -48207798 + AluY SINE Alu 1 311 0 1259 97 115 52 chr17 37230863 37231151 -48207329 + AluSg SINE Alu 2 307 -3 1257 215 35 0 chr17 37231301 37231585 -48206895 + AluJo SINE Alu 1 294 -8 2000 129 3 3 chr17 37231830 37232125 -48206355 - AluSc SINE Alu -14 295 1 1200 164 30 50 chr17 37232130 37232428 -48206052 - AluJb SINE Alu -20 292 1 960 142 6 27 chr17 37232466 37232649 -48205831 - AluSg/x SINE Alu -14 296 118 219 241 19 19 chr17 37232674 37232728 -48205752 + MER5B DNA MER1_type 125 178 0 1094 171 8 159 chr17 37232991 37233137 -48205343 + AluJo SINE Alu 3 169 -133 1900 108 42 7 chr17 37233137 37233423 -48205057 + AluSg SINE Alu 1 296 -14 1576 150 51 11 chr17 37233429 37233560 -48204920 + AluSx SINE Alu 4 128 -184 1855 134 38 0 chr17 37233560 37233851 -48204629 + AluSx SINE Alu 1 302 -10 1576 150 51 11 chr17 37233851 37233992 -48204488 + AluSx SINE Alu 128 287 -25 1094 171 8 159 chr17 37233992 37234190 -48204290 + AluJo SINE Alu 174 301 -1 1119 189 8 42 chr17 37234707 37234972 -48203508 - AluJb SINE Alu -17 295 40 1607 164 23 23 chr17 37235045 37235350 -48203130 + AluSx SINE Alu 1 305 -7 658 154 0 0 chr17 37235413 37235517 -48202963 - FRAM SINE Alu -18 158 55 228 250 0 0 chr17 37235847 37235907 -48202573 + A-rich Low_complexity Low_complexity 1 60 0 270 0 0 0 chr17 37236116 37236146 -48202334 + (TTTTA)n Simple_repeat Simple_repeat 2 31 0 2185 76 14 0 chr17 37236151 37236428 -48202052 - AluSc SINE Alu -27 282 2 1930 109 6 26 chr17 37237050 37237363 -48201117 - AluSx SINE Alu -5 307 1 21 0 0 0 chr17 37237366 37237387 -48201093 + AT_rich Low_complexity Low_complexity 1 21 0 2256 98 3 0 chr17 37237636 37237943 -48200537 - AluSp SINE Alu -4 309 2 1866 108 3 59 chr17 37237953 37238295 -48200185 - AluSc SINE Alu 0 309 1 518 248 0 31 chr17 37240793 37240922 -48197558 - L2 LINE L2 0 3272 3148 192 326 58 0 chr17 37241020 37241106 -48197374 - L2 LINE L2 -1182 2132 2042 203 297 62 0 chr17 37241855 37241919 -48196561 + L2 LINE L2 3191 3258 -55 2035 121 17 0 chr17 37241971 37242438 -48196042 + AluSx SINE Alu 6 477 0 180 0 0 0 chr17 37242438 37242458 -48196022 + (GGAA)n Simple_repeat Simple_repeat 1 20 0 2390 168 47 7 chr17 37243341 37243805 -48194675 + L1MB3 LINE L1 5698 6180 -3 1818 116 0 23 chr17 37243825 37244126 -48194354 + AluSg SINE Alu 9 302 -8 1956 136 0 3 chr17 37244151 37244453 -48194027 + AluSx SINE Alu 1 301 -11 2084 108 0 7 chr17 37244647 37244953 -48193527 + AluSc SINE Alu 1 304 -5 714 130 17 0 chr17 37244964 37245079 -48193401 + AluSp SINE Alu 9 125 -188 521 151 27 75 chr17 37245634 37245780 -48192700 + AluSq/x SINE Alu 11 149 -163 430 154 13 13 chr17 37245960 37246038 -48192442 + AluSc SINE Alu 2 79 -230 297 68 0 0 chr17 37246046 37246090 -48192390 + (TAAA)n Simple_repeat Simple_repeat 2 45 0 1457 207 7 3 chr17 37246216 37246520 -48191960 + AluJb SINE Alu 1 305 -7 2194 103 0 0 chr17 37246571 37246871 -48191609 + AluSx SINE Alu 5 304 -8 1528 175 3 29 chr17 37246882 37247190 -48191290 + AluSx SINE Alu 4 303 -9 645 141 20 0 chr17 37247200 37247299 -48191181 + U6 snRNA snRNA 2 102 -5 1556 158 3 23 chr17 37247478 37247781 -48190699 + AluSx SINE Alu 1 297 -15 2123 110 0 0 chr17 37247850 37248149 -48190331 + AluSg SINE Alu 1 299 -11 707 187 8 22 chr17 37248156 37248271 -48190209 + AluJb SINE Alu 2 116 -196 1728 140 4 0 chr17 37248271 37248550 -48189930 + AluY SINE Alu 1 280 -31 707 187 8 22 chr17 37248550 37248568 -48189912 + AluJb SINE Alu 116 133 -179 2080 91 7 14 chr17 37248605 37248902 -48189578 + AluSq SINE Alu 1 295 -18 1974 114 0 13 chr17 37249627 37249935 -48188545 + AluSg SINE Alu 1 304 -6 1567 110 9 0 chr17 37250020 37250247 -48188233 + AluSx SINE Alu 1 229 -83 287 257 14 14 chr17 37250347 37250421 -48188059 - AluSp SINE Alu -101 202 129 277 297 8 8 chr17 37250474 37250602 -48187878 - FLAM_C SINE Alu -5 128 1 1470 141 0 55 chr17 37251304 37251482 -48186998 - AluSq SINE Alu -14 299 144 2154 93 6 22 chr17 37251482 37251795 -48186685 - AluSx SINE Alu -4 308 1 1470 141 0 55 chr17 37251795 37251928 -48186552 - AluSq SINE Alu -169 144 5 1987 107 0 0 chr17 37252360 37252632 -48185848 + AluSc SINE Alu 5 276 -33 232 231 19 0 chr17 37254791 37254843 -48183637 + (CAGAGA)n Simple_repeat Simple_repeat 2 54 0 206 170 43 0 chr17 37255271 37255318 -48183162 + GA-rich Low_complexity Low_complexity 4 52 0 1397 149 24 31 chr17 37258441 37258730 -48179750 - AluSc SINE Alu -9 290 4 271 381 54 18 chr17 37259986 37260154 -48178326 - MIR SINE MIR -55 207 34 2082 106 0 3 chr17 37260406 37260689 -48177791 + AluSq SINE Alu 1 282 -31 297 0 0 0 chr17 37260694 37260727 -48177753 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 2194 64 7 7 chr17 37260727 37261036 -48177444 + AluY SINE Alu 1 309 0 224 192 58 0 chr17 37262329 37262381 -48176099 + CT-rich Low_complexity Low_complexity 2 56 0 211 262 0 0 chr17 37262579 37262621 -48175859 + G-rich Low_complexity Low_complexity 2 43 0 243 286 0 0 chr17 37262688 37262751 -48175729 + GA-rich Low_complexity Low_complexity 2 64 0 198 118 0 0 chr17 37262925 37262959 -48175521 + (TG)n Simple_repeat Simple_repeat 1 34 0 339 222 0 0 chr17 37263220 37263301 -48175179 + A-rich Low_complexity Low_complexity 1 81 0 2088 75 3 29 chr17 37263918 37264226 -48174254 + AluSg SINE Alu 1 300 -10 2016 109 3 10 chr17 37265135 37265439 -48173041 - AluSx SINE Alu -10 302 1 384 265 75 20 chr17 37265628 37265775 -48172705 + MIR SINE MIR 47 201 -61 1115 147 90 5 chr17 37265868 37266079 -48172401 + L1MD2 LINE L1 5663 5891 -468 829 209 60 35 chr17 37266081 37266282 -48172198 + AluJo SINE Alu 6 211 -101 847 189 0 68 chr17 37266294 37266484 -48171996 - AluSg/x SINE Alu -3 309 133 553 184 0 0 chr17 37266485 37266583 -48171897 + AluJo SINE Alu 203 300 -12 2010 202 53 9 chr17 37266583 37267019 -48171461 + L1MD2 LINE L1 5890 6344 -15 186 205 103 0 chr17 37267475 37267514 -48170966 + L2 LINE L2 3212 3254 -18 945 251 40 12 chr17 37267949 37268196 -48170284 - MIR SINE MIR -6 256 3 1559 176 59 10 chr17 37269953 37270124 -48168356 - AluJb SINE Alu -9 303 111 513 0 0 0 chr17 37270124 37270181 -48168299 + (TG)n Simple_repeat Simple_repeat 2 58 0 1559 176 59 10 chr17 37270181 37270298 -48168182 - AluJb SINE Alu -201 111 1 24 0 0 0 chr17 37270724 37270748 -48167732 + AT_rich Low_complexity Low_complexity 1 24 0 2042 92 14 27 chr17 37270748 37271043 -48167437 - AluY SINE Alu -20 291 1 2068 82 0 54 chr17 37271097 37271413 -48167067 - AluSc SINE Alu -10 299 1 2002 93 0 17 chr17 37273012 37273302 -48165178 + AluSx SINE Alu 18 302 -10 419 215 0 0 chr17 37274967 37275046 -48163434 + MIR3 SINE MIR 97 175 -33 343 61 0 0 chr17 37275046 37275095 -48163385 - AluSx SINE Alu -1 300 252 1368 111 0 15 chr17 37275096 37275295 -48163185 - AluSx SINE Alu -116 196 1 369 43 0 0 chr17 37276026 37276073 -48162407 + (GA)n Simple_repeat Simple_repeat 1 47 0 2313 81 0 7 chr17 37278679 37278987 -48159493 + AluSp SINE Alu 1 306 -7 716 99 0 81 chr17 37279597 37279635 -48158845 + U6 snRNA snRNA 1 41 -66 2162 72 0 23 chr17 37279635 37279940 -48158540 + AluY SINE Alu 1 298 -13 716 99 0 81 chr17 37279940 37280012 -48158468 + U6 snRNA snRNA 41 102 -5 1852 111 0 40 chr17 37280026 37280350 -48158130 + AluY SINE Alu 1 311 0 2114 85 0 7 chr17 37280353 37280636 -48157844 + AluSx SINE Alu 22 302 -10 1190 178 56 26 chr17 37280645 37280915 -48157565 + AluJo SINE Alu 1 278 -34 2278 69 13 3 chr17 37281329 37281633 -48156847 + AluSp SINE Alu 1 307 -6 790 125 6 65 chr17 37281636 37281804 -48156676 + AluSg/x SINE Alu 153 310 0 186 43 0 0 chr17 37281827 37281850 -48156630 + (GGGTG)n Simple_repeat Simple_repeat 4 26 0 2209 112 3 3 chr17 37283483 37283796 -48154684 + AluSp SINE Alu 1 313 0 1865 105 10 57 chr17 37283802 37284116 -48154364 + AluSq SINE Alu 1 299 -14 616 204 48 60 chr17 37284305 37284472 -48154008 + MIR3 SINE MIR 36 200 -8 2296 51 45 3 chr17 37284651 37284943 -48153537 + AluY SINE Alu 1 304 -7 228 254 75 37 chr17 37287210 37287344 -48151136 - L3b LINE CR1 -187 1396 1258 462 18 0 0 chr17 37287362 37287417 -48151063 + (TATG)n Simple_repeat Simple_repeat 2 56 0 1058 145 0 16 chr17 37287417 37287603 -48150877 - AluSg/x SINE Alu -28 284 102 1750 114 37 4 chr17 37288457 37288773 -48149707 + AluSg SINE Alu 1 325 0 24 0 0 0 chr17 37293734 37293758 -48144722 + AT_rich Low_complexity Low_complexity 1 24 0 549 100 0 0 chr17 37294173 37294263 -48144217 + (GA)n Simple_repeat Simple_repeat 2 91 0 21 0 0 0 chr17 37296890 37296911 -48141569 + AT_rich Low_complexity Low_complexity 1 21 0 447 202 96 10 chr17 37297151 37297255 -48141225 + MER81 DNA DNA 2 114 0 1999 110 3 19 chr17 37297739 37298047 -48140433 + AluSx SINE Alu 1 303 -9 2023 114 0 20 chr17 37298159 37298465 -48140015 + AluSx SINE Alu 1 300 -12 394 105 0 64 chr17 37298512 37298618 -48139862 + AluSx SINE Alu 1 70 -233 1232 178 5 5 chr17 37298718 37298960 -48139520 + AluSx SINE Alu 65 306 0 393 272 101 59 chr17 37300931 37301100 -48137380 + MER5B DNA MER1_type 3 178 0 1724 123 79 14 chr17 37301983 37302275 -48136205 + AluSp SINE Alu 2 312 -1 748 152 14 51 chr17 37302369 37302507 -48135973 + AluJo/FLAM SINE Alu 1 133 -169 2109 114 0 7 chr17 37302507 37302806 -48135674 + AluSx SINE Alu 1 297 -15 1856 128 27 10 chr17 37302806 37303103 -48135377 + AluSx SINE Alu 1 302 -10 1322 98 67 62 chr17 37303105 37303226 -48135254 + AluSq SINE Alu 1 125 -188 2050 107 10 10 chr17 37303226 37303536 -48134944 + AluSp SINE Alu 1 310 -3 1322 98 67 62 chr17 37303536 37303638 -48134842 + AluSq SINE Alu 125 225 -88 246 32 0 0 chr17 37303656 37303687 -48134793 + (CAA)n Simple_repeat Simple_repeat 2 32 0 1800 100 48 4 chr17 37303688 37303982 -48134498 + AluSx SINE Alu 2 307 0 1290 198 10 41 chr17 37304496 37304789 -48133691 + AluJo SINE Alu 16 299 -13 1462 129 108 32 chr17 37304802 37305080 -48133400 + AluSx SINE Alu 11 309 -3 1133 188 6 74 chr17 37305184 37305509 -48132971 + AluSq SINE Alu 1 303 0 1809 139 0 4 chr17 37305548 37305814 -48132666 + AluSq SINE Alu 1 265 -48 203 231 15 15 chr17 37305847 37305912 -48132568 + A-rich Low_complexity Low_complexity 1 65 0 227 171 0 0 chr17 37305930 37305965 -48132515 - Alu SINE Alu -232 70 36 925 191 7 77 chr17 37305966 37306133 -48132347 + AluJb SINE Alu 26 164 -148 1395 185 0 13 chr17 37306133 37306436 -48132044 + AluSg SINE Alu 1 299 -11 925 191 7 77 chr17 37306436 37306567 -48131913 + AluJb SINE Alu 164 303 -9 2192 96 0 3 chr17 37307462 37307764 -48130716 + AluY SINE Alu 1 301 -10 1353 166 44 41 chr17 37307778 37308073 -48130407 + AluJo SINE Alu 6 301 -11 302 326 83 50 chr17 37308154 37308335 -48130145 + L2 LINE L2 3082 3268 -4 1047 133 0 41 chr17 37309216 37309412 -48129068 - AluSc SINE Alu -9 300 113 527 239 150 51 chr17 37309425 37309718 -48128762 + L1ME1 LINE L1 5841 6162 -4 275 206 29 49 chr17 37309714 37309816 -48128664 + L1MD3 LINE L1 7911 8041 -1 * 721 175 8 0 chr17 37309820 37309940 -48128540 + FLAM_C SINE Alu 1 121 -12 1113 211 48 28 chr17 37310907 37311196 -48127284 + AluSp SINE Alu 7 301 -12 2177 110 3 7 chr17 37311396 37311686 -48126794 + AluSg SINE Alu 1 289 -21 1552 193 3 10 chr17 37311686 37311992 -48126488 + AluSg SINE Alu 1 304 -6 806 236 24 28 chr17 37312143 37312355 -48126125 + AluJo SINE Alu 1 211 -101 1454 179 0 30 chr17 37312375 37312672 -48125808 + AluSq SINE Alu 1 288 -25 1586 168 20 56 chr17 37313282 37313586 -48124894 + AluJb SINE Alu 1 293 -19 617 225 50 21 chr17 37313653 37313851 -48124629 - MIR SINE MIR -13 249 50 212 154 0 0 chr17 37315818 37315857 -48122623 + C-rich Low_complexity Low_complexity 5 43 0 2423 80 0 3 chr17 37316690 37317003 -48121477 - AluSx SINE Alu 0 312 1 1524 131 0 122 chr17 37317004 37317340 -48121140 - AluJb SINE Alu -5 297 3 295 333 103 18 chr17 37317467 37317632 -48120848 - MIR SINE MIR -74 188 10 336 295 104 64 chr17 37317826 37317999 -48120481 - MIR SINE MIR -42 220 41 1013 184 3 100 chr17 37318073 37318404 -48120076 - AluJo SINE Alu 0 302 4 1807 135 23 16 chr17 37318459 37318763 -48119717 + AluSc SINE Alu 1 306 -3 874 144 15 0 chr17 37318850 37318982 -48119498 + AluSx SINE Alu 1 134 -179 1636 101 3 125 chr17 37318983 37319328 -48119152 + AluYb8 SINE Alu 1 303 -15 809 188 0 66 chr17 37319458 37319655 -48118825 + AluSg/x SINE Alu 102 285 -27 1070 156 0 42 chr17 37319711 37319903 -48118577 + AluSx SINE Alu 125 308 -2 1054 228 114 22 chr17 37319909 37320181 -48118299 + AluJo SINE Alu 5 301 -1 2391 74 7 10 chr17 37320187 37320486 -48117994 + AluSp SINE Alu 2 299 -14 2431 84 0 3 chr17 37320487 37320795 -48117685 + AluSp SINE Alu 1 307 -6 687 119 0 80 chr17 37320796 37320947 -48117533 + Tigger4(Zombi) DNA MER2_type 2513 2651 -80 21 0 0 0 chr17 37371370 37371391 -48067089 + GC_rich Low_complexity Low_complexity 1 21 0 2485 59 0 0 chr17 37373734 37374038 -48064442 + AluY SINE Alu 1 304 -7 604 195 0 47 chr17 37374052 37374180 -48064300 + FLAM_C SINE Alu 3 124 -19 22 0 0 0 chr17 37374187 37374209 -48064271 + AT_rich Low_complexity Low_complexity 1 22 0 385 303 119 38 chr17 37374232 37374323 -48064157 - MIR SINE MIR -43 219 137 2000 116 14 3 chr17 37374323 37374616 -48063864 + AluSq SINE Alu 1 296 -17 385 303 119 38 chr17 37374616 37374709 -48063771 - MIR SINE MIR -125 137 20 1882 146 58 0 chr17 37375498 37375793 -48062687 + AluJo SINE Alu 1 312 0 1842 157 7 7 chr17 37375840 37376146 -48062334 + AluJo SINE Alu 4 309 -3 21 57 0 0 chr17 37376891 37376926 -48061554 + GC_rich Low_complexity Low_complexity 1 35 0 887 304 97 19 chr17 37378076 37378487 -48059993 + L3 LINE CR1 1130 1572 -5 625 279 34 6 chr17 37378645 37378824 -48059656 + MIR SINE MIR 28 211 -51 2185 96 0 16 chr17 37378926 37379229 -48059251 + AluSg SINE Alu 1 298 -12 2335 60 0 0 chr17 37379229 37379546 -48058934 + AluY SINE Alu 1 317 0 2175 89 14 0 chr17 37379553 37379844 -48058636 + AluY SINE Alu 1 295 -16 197 225 125 62 chr17 37379846 37379926 -48058554 - MIR3 SINE MIR -48 160 76 301 270 113 62 chr17 37380696 37381051 -48057429 - L2 LINE L2 -2 3270 2898 626 141 0 20 chr17 37381454 37381553 -48056927 - AluJ/FLAM SINE Alu -210 102 6 558 241 48 0 chr17 37381577 37381743 -48056737 + L1MC4a LINE L1 5765 5938 -1870 384 137 359 0 chr17 37381770 37381887 -48056593 + Charlie8 DNA MER1_type 106 264 -2153 213 39 0 0 chr17 37382037 37382063 -48056417 + (CTG)n Simple_repeat Simple_repeat 3 28 0 1833 152 10 7 chr17 37382588 37382878 -48055602 - AluJb SINE Alu -17 295 5 821 78 0 5 chr17 37383578 37383720 -48054760 + AluSx SINE Alu 83 296 -13 185 65 32 0 chr17 37383811 37383842 -48054638 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 302 292 192 8 chr17 37383842 37383962 -48054518 - L2 LINE L2 -13 3259 3118 270 262 25 66 chr17 37384216 37384338 -48054142 + MIR3 SINE MIR 44 160 -48 305 255 85 0 chr17 37384361 37384440 -48054040 + MIR SINE MIR 136 228 -34 2171 125 0 3 chr17 37384440 37384752 -48053728 + AluSq SINE Alu 1 311 -2 305 255 85 0 chr17 37384752 37384778 -48053702 + MIR SINE MIR 228 250 -12 936 205 0 21 chr17 37384782 37384972 -48053508 - AluJb SINE Alu -6 306 121 23 33 0 0 chr17 37384994 37385024 -48053456 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr17 37387145 37387166 -48051314 + GC_rich Low_complexity Low_complexity 1 21 0 212 358 16 32 chr17 37387388 37387511 -48050969 - L2 LINE L2 -547 2767 2647 1616 178 10 23 chr17 37387599 37387730 -48050750 + AluJb SINE Alu 1 132 -180 2152 100 21 3 chr17 37387730 37388019 -48050461 + AluSg SINE Alu 1 294 -16 1616 178 10 23 chr17 37388019 37388191 -48050289 + AluJb SINE Alu 132 300 -12 790 167 0 62 chr17 37388220 37388249 -48050231 + MIR SINE MIR 4 33 -229 2306 87 3 0 chr17 37388249 37388547 -48049933 + AluY SINE Alu 1 299 -12 790 167 0 62 chr17 37388547 37388679 -48049801 + MIR SINE MIR 33 155 -107 2045 90 83 0 chr17 37388779 37389067 -48049413 + AluSx SINE Alu 1 312 0 2043 142 3 19 chr17 37389081 37389398 -48049082 + AluSx SINE Alu 1 312 0 395 244 73 41 chr17 37389504 37389627 -48048853 - MIR SINE MIR -59 203 77 2325 97 3 0 chr17 37389665 37389973 -48048507 + AluSx SINE Alu 1 309 -3 222 305 86 52 chr17 37390026 37390200 -48048280 - L2 LINE L2 -92 3221 3042 279 0 0 0 chr17 37390491 37390522 -48047958 + (TG)n Simple_repeat Simple_repeat 2 32 0 189 0 0 0 chr17 37390720 37390741 -48047739 + (TGAA)n Simple_repeat Simple_repeat 1 21 0 303 93 0 0 chr17 37391690 37391733 -48046747 + (TG)n Simple_repeat Simple_repeat 1 43 0 348 217 200 42 chr17 37393294 37393414 -48045066 - MIR SINE MIR -71 191 53 2032 113 30 0 chr17 37393433 37393733 -48044747 + AluSx SINE Alu 1 309 -3 409 348 55 6 chr17 37393773 37393954 -48044526 - L2 LINE L2 -5 3308 3119 322 235 76 17 chr17 37393981 37394100 -48044380 - MIR SINE MIR -109 153 28 2179 114 7 0 chr17 37394686 37394994 -48043486 - AluSp SINE Alu 0 313 4 191 289 53 0 chr17 37394994 37395070 -48043410 + MIR SINE MIR 65 144 -118 226 118 98 0 chr17 37395225 37395276 -48043204 + MER53 DNA DNA 1 56 -133 1961 114 37 10 chr17 37395281 37395580 -48042900 - AluSx SINE Alu -1 311 5 2030 130 3 13 chr17 37395582 37395883 -48042597 - AluSx SINE Alu -13 299 2 1703 179 0 10 chr17 37395897 37396194 -48042286 - AluJo SINE Alu -13 299 6 21 36 0 0 chr17 37396198 37396226 -48042254 + AT_rich Low_complexity Low_complexity 1 28 0 828 88 0 0 chr17 37396227 37396340 -48042140 + AluSg/x SINE Alu 189 301 -8 539 171 9 0 chr17 37396341 37396452 -48042028 + MER53 DNA DNA 73 184 -5 224 326 22 11 chr17 37396655 37396744 -48041736 - L2 LINE L2 -527 2787 2698 1841 60 0 21 chr17 37396756 37396991 -48041489 + AluY SINE Alu 1 230 -81 1384 73 17 0 chr17 37396991 37397170 -48041310 + AluSp SINE Alu 87 268 -45 2109 117 0 3 chr17 37397185 37397484 -48040996 + AluSx SINE Alu 1 298 -14 2351 90 0 0 chr17 37397983 37398293 -48040187 + AluSg SINE Alu 1 310 0 505 255 224 10 chr17 37399707 37399899 -48038581 - MIR SINE MIR -6 256 24 1142 114 13 0 chr17 37400167 37400325 -48038155 - AluSq SINE Alu -20 293 134 2172 84 20 7 chr17 37400325 37400624 -48037856 - AluY SINE Alu -8 303 1 543 242 54 7 chr17 37400624 37400773 -48037707 - MIR3 SINE MIR -12 196 41 2319 80 7 3 chr17 37401463 37401765 -48036715 - AluSg SINE Alu -7 303 1 2040 118 6 22 chr17 37402343 37402657 -48035823 + AluSx SINE Alu 1 309 -3 2209 97 13 0 chr17 37403359 37403659 -48034821 + AluSg SINE Alu 1 304 -6 21 36 0 0 chr17 37404112 37404140 -48034340 + AT_rich Low_complexity Low_complexity 1 28 0 556 226 52 0 chr17 37404485 37404600 -48033880 - FLAM_A SINE Alu -12 121 1 1898 123 3 20 chr17 37404657 37404958 -48033522 - AluSg SINE Alu -14 296 1 24 0 0 0 chr17 37404961 37404985 -48033495 + AT_rich Low_complexity Low_complexity 1 24 0 1601 117 4 0 chr17 37405003 37405233 -48033247 + AluSx SINE Alu 1 231 -81 258 286 41 0 chr17 37405274 37405372 -48033108 - L1M4 LINE L1 -1118 5028 4927 469 87 22 87 chr17 37405373 37405465 -48033015 - AluSp/q SINE Alu -7 306 221 1740 118 9 75 chr17 37405691 37405832 -48032648 + AluSx SINE Alu 3 152 -160 2013 96 0 0 chr17 37405832 37406104 -48032376 + AluSc SINE Alu 1 272 -37 246 32 0 0 chr17 37406106 37406137 -48032343 + (CAA)n Simple_repeat Simple_repeat 1 31 0 1740 118 9 75 chr17 37406137 37406324 -48032156 + AluSx SINE Alu 153 312 0 652 243 116 21 chr17 37406815 37407004 -48031476 - MIR SINE MIR -49 213 7 35 24 0 0 chr17 37407442 37407484 -48030996 + AT_rich Low_complexity Low_complexity 1 42 0 21 0 0 0 chr17 37407530 37407551 -48030929 + AT_rich Low_complexity Low_complexity 1 21 0 1871 83 112 7 chr17 37408769 37409045 -48029435 - AluSg SINE Alu -5 305 1 224 209 0 0 chr17 37410821 37410864 -48027616 + (CAGAGA)n Simple_repeat Simple_repeat 2 44 0 206 170 43 0 chr17 37411299 37411346 -48027134 + GA-rich Low_complexity Low_complexity 4 52 0 2285 65 10 0 chr17 37414433 37414724 -48023756 - AluSg SINE Alu -16 294 1 736 116 39 39 chr17 37414967 37415096 -48023384 + AluJo/FLAM SINE Alu 2 130 -172 1560 106 122 4 chr17 37415097 37415351 -48023129 + AluSx SINE Alu 28 311 -1 203 161 18 0 chr17 37416204 37416260 -48022220 + (CGG)n Simple_repeat Simple_repeat 2 58 0 24 32 0 0 chr17 37417087 37417118 -48021362 + GC_rich Low_complexity Low_complexity 1 31 0 24 0 0 0 chr17 37419518 37419542 -48018938 + AT_rich Low_complexity Low_complexity 1 24 0 2234 89 0 7 chr17 37419548 37419851 -48018629 + AluSg SINE Alu 1 301 -9 477 285 71 33 chr17 37420141 37420212 -48018268 - MIR SINE MIR -15 247 180 2001 81 12 56 chr17 37420212 37420535 -48017945 - AluSg SINE Alu -1 309 1 477 285 71 33 chr17 37420535 37420697 -48017783 - MIR SINE MIR -82 180 12 420 203 40 0 chr17 37420777 37420851 -48017629 - AluJ/FLAM SINE Alu -224 78 2 961 107 43 0 chr17 37421315 37421455 -48017025 + AluSq/x SINE Alu 1 146 -167 346 279 43 125 chr17 37421504 37421544 -48016936 + MIR3 SINE MIR 17 59 -149 2355 70 0 7 chr17 37421544 37421846 -48016634 - AluY SINE Alu -10 301 2 346 279 43 125 chr17 37421846 37421901 -48016579 + MIR3 SINE MIR 59 117 -91 2230 114 0 0 chr17 37421901 37422207 -48016273 - AluSq SINE Alu -7 306 1 346 279 43 125 chr17 37422207 37422318 -48016162 + MIR3 SINE MIR 117 207 -1 2153 104 3 0 chr17 37423079 37423378 -48015102 - AluSx SINE Alu -12 300 1 2014 123 20 0 chr17 37423662 37423964 -48014516 + AluSx SINE Alu 1 308 -4 2107 54 22 18 chr17 37423966 37424242 -48014238 + AluY SINE Alu 23 299 -12 29 0 0 0 chr17 37425185 37425214 -48013266 + AT_rich Low_complexity Low_complexity 1 29 0 2102 104 10 0 chr17 37425214 37425513 -48012967 - AluSq SINE Alu -11 302 1 1669 131 73 0 chr17 37425515 37425790 -48012690 - AluSp SINE Alu -18 295 1 2035 133 7 0 chr17 37426055 37426363 -48012117 - AluSx SINE Alu -2 310 1 1785 132 34 3 chr17 37426364 37426659 -48011821 - AluSg SINE Alu -6 304 1 206 219 85 61 chr17 37426991 37427073 -48011407 + MIR SINE MIR 54 137 -71 771 139 7 49 chr17 37427237 37427381 -48011099 - FLAM_C SINE Alu 0 143 6 1918 126 11 0 chr17 37427469 37427754 -48010726 - AluSg1 SINE Alu -21 288 1 1582 148 61 11 chr17 37427785 37427942 -48010538 - AluJb SINE Alu -21 291 113 2168 92 0 20 chr17 37427942 37428246 -48010234 - AluSx SINE Alu -14 298 1 1582 148 61 11 chr17 37428246 37428365 -48010115 - AluJb SINE Alu -199 113 1 2064 114 0 0 chr17 37428678 37428984 -48009496 - AluY SINE Alu 0 306 1 2354 78 0 7 chr17 37429391 37429700 -48008780 - AluSq SINE Alu -5 308 2 2369 72 0 3 chr17 37429740 37430045 -48008435 + AluSc SINE Alu 2 305 -4 1679 179 0 10 chr17 37430050 37430346 -48008134 - AluSx SINE Alu -19 293 1 1712 168 37 48 chr17 37430578 37430643 -48007837 - MER47A DNA MER2_type -1976 347 283 1970 147 0 0 chr17 37430643 37430942 -48007538 + AluJo SINE Alu 1 299 -13 2243 84 3 0 chr17 37430946 37431243 -48007237 + AluSq SINE Alu 5 302 -11 1712 168 37 48 chr17 37431243 37431523 -48006957 - MER47A DNA MER2_type -2043 280 1 1864 132 20 3 chr17 37431878 37432174 -48006306 - AluSx SINE Alu -11 301 1 1345 127 147 4 chr17 37432189 37432457 -48006023 - AluSg1 SINE Alu 0 304 2 2235 88 14 0 chr17 37432475 37432771 -48005709 - AluSc SINE Alu -9 300 1 400 148 0 0 chr17 37433191 37433259 -48005221 - AluJ/FRAM SINE Alu -13 289 228 914 178 0 0 chr17 37433293 37433450 -48005030 - FRAM SINE Alu -24 152 1 1879 103 40 26 chr17 37433544 37433846 -48004634 - AluSg SINE Alu -4 306 1 35 54 0 22 chr17 37433939 37433976 -48004504 + AT_rich Low_complexity Low_complexity 1 37 -53 2008 124 3 0 chr17 37433976 37434275 -48004205 - AluSc SINE Alu -9 300 1 1507 199 7 3 chr17 37434277 37434569 -48003911 - AluJo SINE Alu -19 293 1 35 54 0 22 chr17 37434569 37434620 -48003860 + AT_rich Low_complexity Low_complexity 38 90 0 2293 77 3 3 chr17 37434631 37434930 -48003550 + AluSx SINE Alu 1 299 -13 589 263 8 0 chr17 37435048 37435181 -48003299 - FLAM_C SINE Alu -8 135 2 2184 97 0 26 chr17 37435335 37435646 -48002834 - AluSc SINE Alu -6 303 1 1303 218 10 30 chr17 37435670 37435968 -48002512 - AluJo SINE Alu -8 294 3 2266 80 0 0 chr17 37436058 37436359 -48002121 - AluY SINE Alu -10 301 1 2084 97 7 3 chr17 37436406 37436706 -48001774 - AluSc SINE Alu -8 301 1 1668 173 3 10 chr17 37436706 37437001 -48001479 - AluJb SINE Alu -8 304 12 1722 146 20 20 chr17 37437021 37437323 -48001157 - AluJo SINE Alu -10 302 1 2125 105 0 0 chr17 37437347 37437643 -48000837 - AluSq SINE Alu -17 296 1 998 280 78 77 chr17 37437720 37438507 -47999973 - L2 LINE L2 -4 3309 2519 1247 136 0 126 chr17 37438531 37438714 -47999766 - AluJo SINE Alu -20 292 158 1582 183 13 7 chr17 37438714 37439020 -47999460 - AluJo SINE Alu -4 308 1 1247 136 0 126 chr17 37439020 37439130 -47999350 - AluJo SINE Alu -154 158 36 1086 148 21 160 chr17 37439136 37439283 -47999197 - L1M3 LINE L1 -561 5610 5444 2114 72 58 0 chr17 37439283 37439575 -47998905 - AluSp SINE Alu -4 309 1 1086 148 21 160 chr17 37439575 37439610 -47998870 - L1M3 LINE L1 -727 5444 5406 2215 88 0 3 chr17 37439610 37439906 -47998574 + AluSx SINE Alu 1 295 -17 1086 148 21 160 chr17 37439906 37440060 -47998420 - L1M3 LINE L1 -765 5406 5320 582 244 31 0 chr17 37440062 37440189 -47998291 - FLAM_A SINE Alu -7 135 5 376 101 58 0 chr17 37440193 37440262 -47998218 - L1M LINE L1 -2457 5328 5256 714 149 88 41 chr17 37440282 37440476 -47998004 - L1M4 LINE L1 -5458 1084 882 1236 176 64 22 chr17 37440511 37440649 -47997831 - AluJo SINE Alu -32 280 149 5264 67 17 31 chr17 37440649 37440718 -47997762 - LTR8 LTR ERV1 0 691 623 2386 52 0 10 chr17 37440718 37441027 -47997453 + AluY SINE Alu 1 306 -5 5264 67 17 31 chr17 37441027 37441658 -47996822 - LTR8 LTR ERV1 -68 623 1 1236 176 64 22 chr17 37441658 37441786 -47996694 - AluJo SINE Alu -163 149 3 2865 216 104 50 chr17 37441788 37442373 -47996107 - L1M4 LINE L1 -5650 892 340 2071 95 0 3 chr17 37442373 37442683 -47995797 - AluSg SINE Alu 0 309 1 2865 216 104 50 chr17 37442683 37442849 -47995631 - L1M4 LINE L1 -6202 340 184 1418 128 49 8 chr17 37442849 37443092 -47995388 - L1MA4A LINE L1 -11 6292 6040 2865 216 104 50 chr17 37443092 37443184 -47995296 - L1M4 LINE L1 -6358 184 1 2149 82 4 0 chr17 37443436 37443715 -47994765 + AluSc SINE Alu 1 280 -29 195 42 0 0 chr17 37443718 37443742 -47994738 + (GAAAA)n Simple_repeat Simple_repeat 3 26 0 1835 122 0 41 chr17 37443968 37444262 -47994218 - AluSx SINE Alu -18 294 13 2039 117 3 10 chr17 37444274 37444581 -47993899 - AluSq SINE Alu -8 305 1 180 283 50 0 chr17 37445369 37445429 -47993051 - L2 LINE L2 -214 3058 2996 2064 97 7 36 chr17 37445596 37445904 -47992576 + AluSq SINE Alu 1 299 -14 2351 72 3 0 chr17 37445978 37446282 -47992198 - AluSc SINE Alu -4 305 1 389 336 75 68 chr17 37446398 37446693 -47991787 + HAL1 LINE L1 154 450 -2057 1247 106 0 0 chr17 37446693 37446863 -47991617 + AluSg/x SINE Alu 134 303 -9 316 337 15 74 chr17 37446876 37447078 -47991402 + HAL1 LINE L1 436 625 -1882 22 0 0 0 chr17 37447161 37447183 -47991297 + AT_rich Low_complexity Low_complexity 1 22 0 1850 114 53 0 chr17 37447303 37447584 -47990896 - AluSp SINE Alu -17 296 1 2629 16 0 29 chr17 37447700 37448016 -47990464 - AluY SINE Alu -4 307 1 1874 138 3 3 chr17 37448016 37448312 -47990168 - AluSx SINE Alu -16 296 1 781 206 0 61 chr17 37448394 37448574 -47989906 - FRAM SINE Alu -14 162 1 1333 201 61 4 chr17 37448587 37448865 -47989615 + AluJo SINE Alu 1 294 -8 1079 95 0 7 chr17 37448870 37449017 -47989463 + AluSg SINE Alu 1 146 -164 1787 109 24 0 chr17 37449017 37449264 -47989216 + AluSg SINE Alu 51 303 -7 234 352 16 32 chr17 37449267 37449392 -47989088 - L3 LINE CR1 -822 755 633 2274 102 0 0 chr17 37449569 37449872 -47988608 + AluY SINE Alu 4 306 -5 1904 157 0 10 chr17 37450121 37450414 -47988066 - AluJo SINE Alu -22 290 1 1687 132 13 72 chr17 37450443 37450747 -47987733 + AluSx SINE Alu 1 286 -26 24 85 0 0 chr17 37450747 37450806 -47987674 + AT_rich Low_complexity Low_complexity 1 59 0 1333 269 141 26 chr17 37450851 37450906 -47987574 + HAL1 LINE L1 1154 1201 -1306 2295 128 0 0 chr17 37450906 37451212 -47987268 + AluSx SINE Alu 3 308 -4 1333 269 141 26 chr17 37451212 37451338 -47987142 + HAL1 LINE L1 1201 1311 -1196 2284 100 3 3 chr17 37451338 37451638 -47986842 + AluY SINE Alu 1 300 -11 1333 269 141 26 chr17 37451638 37452177 -47986303 + HAL1 LINE L1 1311 1958 -549 644 196 196 0 chr17 37452380 37452523 -47985957 + FAM SINE Alu 1 171 -4 228 163 23 0 chr17 37453562 37453605 -47984875 - MLT1H LTR MaLR -15 580 537 900 227 32 106 chr17 37453667 37453888 -47984592 - MLT1H LTR MaLR -185 364 177 1744 172 13 3 chr17 37453888 37454190 -47984290 - AluJb SINE Alu -7 305 1 900 227 32 106 chr17 37454190 37454316 -47984164 - MLT1H LTR MaLR -372 177 43 2307 108 0 7 chr17 37454332 37454637 -47983843 + AluSx SINE Alu 3 305 -7 1697 177 23 16 chr17 37454680 37454990 -47983490 - AluJb SINE Alu 0 312 1 921 121 0 29 chr17 37455064 37455204 -47983276 + FLAM_C SINE Alu 1 136 -7 2083 81 7 48 chr17 37455207 37455529 -47982951 + AluSp SINE Alu 1 310 0 2143 108 14 10 chr17 37455603 37455898 -47982582 + AluSx SINE Alu 1 296 -16 1584 72 5 0 chr17 37455898 37456091 -47982389 + AluSp SINE Alu 1 194 -119 705 173 0 0 chr17 37456092 37456202 -47982278 - AluJo/FLAM SINE Alu -201 111 2 2370 76 0 20 chr17 37456212 37456515 -47981965 - AluY SINE Alu -14 297 1 701 176 0 8 chr17 37456586 37456705 -47981775 - FLAM_C SINE Alu -24 119 2 2333 93 0 0 chr17 37456715 37457005 -47981475 - AluY SINE Alu -21 290 1 608 257 43 11 chr17 37457198 37457422 -47981058 + MLT2E LTR ERVL 343 628 0 234 290 30 38 chr17 37457423 37457554 -47980926 + MST-int LTR MaLR 3 132 -1519 918 291 99 12 chr17 37457702 37458046 -47980434 - MLT2E LTR ERVL -254 374 1 1672 168 94 13 chr17 37458110 37458491 -47979989 - L1MB3 LINE L1 -9 6174 5763 * 2138 172 58 72 chr17 37458475 37458903 -47979577 - L1ME1 LINE L1 -237 5929 5496 1847 90 86 0 chr17 37458903 37459158 -47979322 - AluSq SINE Alu -16 297 21 2138 172 58 72 chr17 37459158 37459170 -47979310 - L1ME1 LINE L1 -670 5496 5485 1405 144 50 77 chr17 37459170 37459469 -47979011 - AluSx SINE Alu -21 291 1 2138 172 58 72 chr17 37459469 37459777 -47978703 - L1ME1 LINE L1 -681 5485 5180 2230 126 3 0 chr17 37459810 37460120 -47978360 - AluSx SINE Alu -1 311 1 2067 169 11 49 chr17 37460120 37460582 -47977898 + MLT2B2 LTR ERVL 15 514 -1 477 199 125 97 chr17 37460586 37460802 -47977678 + L1MCa LINE L1 1738 2033 -4467 780 163 39 13 chr17 37460813 37460966 -47977514 + FRAM SINE Alu 1 156 -20 1458 202 29 101 chr17 37461091 37461227 -47977253 + L1M4 LINE L1 4764 4908 -1238 2316 90 7 7 chr17 37461227 37461528 -47976952 - AluSp SINE Alu -12 301 1 1458 202 29 101 chr17 37461528 37461557 -47976923 + L1M4 LINE L1 4908 4938 -1208 1806 161 3 30 chr17 37461557 37461855 -47976625 + AluJb SINE Alu 1 290 -22 1762 199 0 0 chr17 37461865 37462156 -47976324 + AluJb SINE Alu 1 291 -21 1458 202 29 101 chr17 37462156 37462284 -47976196 + L1M4 LINE L1 4947 5083 -1063 2319 99 0 3 chr17 37462284 37462587 -47975893 - AluSg SINE Alu -8 302 1 1458 202 29 101 chr17 37462587 37462641 -47975839 + L1M4 LINE L1 5083 5139 -1007 2515 75 3 0 chr17 37462641 37462947 -47975533 - AluSq SINE Alu -6 307 1 1458 202 29 101 chr17 37462947 37463100 -47975380 + L1M4 LINE L1 5139 5241 -905 288 164 0 6 chr17 37463122 37463186 -47975294 + Alu SINE Alu 1 43 -258 456 154 13 0 chr17 37463186 37463264 -47975216 - AluJ/FLAM SINE Alu -221 91 13 2162 109 3 3 chr17 37463289 37463598 -47974882 + AluSq SINE Alu 1 309 0 21 0 0 0 chr17 37463771 37463792 -47974688 + AT_rich Low_complexity Low_complexity 1 21 0 290 306 27 18 chr17 37463915 37464026 -47974454 - L2 LINE L2 -12 3260 3149 309 252 209 7 chr17 37464301 37464440 -47974040 - MER104 DNA Tc2 0 180 14 766 110 15 52 chr17 37464443 37464579 -47973901 - L1MB2 LINE L1 -10 6161 6031 2271 89 0 11 chr17 37464597 37464921 -47973559 + AluSc SINE Alu 1 321 0 1550 154 140 0 chr17 37464926 37465219 -47973261 - MER44D DNA MER2_type -1 608 5 1106 278 98 12 chr17 37465287 37465694 -47972786 - MLT1J LTR MaLR -13 498 57 2114 132 10 3 chr17 37465810 37466120 -47972360 - AluSx SINE Alu 0 312 1 704 183 8 0 chr17 37466146 37466272 -47972208 - FLAM_A SINE Alu -6 127 1 2355 98 0 3 chr17 37467161 37467468 -47971012 - AluSq SINE Alu -7 306 1 582 229 10 90 chr17 37467572 37467773 -47970707 - MER5A DNA MER1_type -3 186 2 1963 128 37 0 chr17 37468004 37468302 -47970178 - AluSp SINE Alu -2 311 3 522 77 0 135 chr17 37468513 37468569 -47969911 - MER46B DNA MER2_type -2673 58 145 2564 57 0 0 chr17 37468569 37468866 -47969614 - AluY SINE Alu -14 297 1 522 77 0 135 chr17 37468866 37468913 -47969567 - MER46B DNA MER2_type -2585 146 94 741 253 6 0 chr17 37468913 37469079 -47969401 - AluJb SINE Alu -9 303 137 312 137 20 0 chr17 37469079 37469130 -47969350 + Tigger4(Zombi) DNA MER2_type 45 96 -2635 459 107 0 0 chr17 37469168 37469243 -47969237 - Alu SINE Alu -2 310 236 2278 120 0 0 chr17 37469243 37469551 -47968929 - AluSx SINE Alu -4 308 1 1520 180 19 0 chr17 37469551 37469807 -47968673 + AluJo SINE Alu 26 286 -26 202 320 13 13 chr17 37469852 37469930 -47968550 + L3 LINE CR1 1122 1199 -378 699 179 0 0 chr17 37469931 37470043 -47968437 + AluJo/FLAM SINE Alu 3 114 -198 2431 77 3 0 chr17 37470043 37470340 -47968140 - AluSc SINE Alu -11 298 1 333 26 0 0 chr17 37470363 37470401 -47968079 - MER4E LTR ERV1 -76 690 653 7568 37 5 1 chr17 37470534 37471825 -47966655 + L1PA5 LINE L1 4859 6151 -3 1594 161 3 64 chr17 37472170 37472481 -47965999 - AluJo SINE Alu -20 292 1 417 107 0 0 chr17 37472482 37472538 -47965942 - AluJb SINE Alu -167 145 90 262 330 33 0 chr17 37472544 37472635 -47965845 - L2 LINE L2 -19 3253 3160 2051 134 10 0 chr17 37472680 37472970 -47965510 + AluSq SINE Alu 1 293 -20 224 294 159 16 chr17 37473252 37473378 -47965102 + L2 LINE L2 3164 3307 -6 1901 150 0 19 chr17 37473703 37474017 -47964463 - AluSx SINE Alu -4 308 1 1052 195 0 10 chr17 37474154 37474359 -47964121 - AluJb SINE Alu -14 298 96 2176 124 0 3 chr17 37474359 37474658 -47963822 + AluSg1 SINE Alu 1 298 -11 1242 132 0 0 chr17 37474658 37474825 -47963655 + AluSg/x SINE Alu 132 298 -12 642 191 0 0 chr17 37474829 37474934 -47963546 - AluJ SINE Alu -205 107 3 248 266 202 0 chr17 37474962 37475056 -47963424 + MIR SINE MIR 122 234 -28 1797 156 0 56 chr17 37475619 37475788 -47962692 - AluJb SINE Alu -10 302 158 2410 70 0 7 chr17 37475788 37476087 -47962393 - AluY SINE Alu -14 297 1 1797 156 0 56 chr17 37476087 37476237 -47962243 - AluJb SINE Alu -154 158 1 255 310 103 9 chr17 37476427 37476543 -47961937 - L2 LINE L2 -592 2722 2596 291 297 0 0 chr17 37476825 37476899 -47961581 - MLT1I LTR MaLR -268 141 68 922 179 52 107 chr17 37477839 37477995 -47960485 - L1MC4a LINE L1 0 7808 7645 1912 93 48 48 chr17 37477995 37478126 -47960354 + AluSx SINE Alu 5 135 -177 2271 89 3 0 chr17 37478126 37478418 -47960062 + AluSg SINE Alu 1 293 -17 1912 93 48 48 chr17 37478418 37478576 -47959904 + AluSx SINE Alu 134 294 -18 2073 68 39 25 chr17 37478584 37478863 -47959617 + AluSc SINE Alu 10 292 -17 922 179 52 107 chr17 37478863 37478988 -47959492 - L1MC4a LINE L1 -170 7638 7534 983 234 10 0 chr17 37479062 37479259 -47959221 - AluJb SINE Alu -38 274 76 282 111 0 153 chr17 37479262 37479334 -47959146 - AluJo SINE Alu -159 143 83 2004 135 7 3 chr17 37479334 37479622 -47958858 - AluSx SINE Alu -9 303 15 1399 217 97 50 chr17 37479636 37479956 -47958524 - L1MC4a LINE L1 -319 7489 7185 7153 51 29 21 chr17 37479956 37481575 -47956905 - SVA Other Other -723 1386 1 1399 217 97 50 chr17 37481575 37481670 -47956810 - L1MC4a LINE L1 -623 7185 7096 2283 117 0 0 chr17 37481670 37481977 -47956503 - AluSg SINE Alu -3 307 1 1399 217 97 50 chr17 37481977 37482117 -47956363 - L1MC4a LINE L1 -712 7096 6906 195 42 0 0 chr17 37482379 37482403 -47956077 + (TCCCC)n Simple_repeat Simple_repeat 1 24 0 1135 185 122 20 chr17 37482408 37482662 -47955818 - AluJo SINE Alu -32 280 1 1506 87 5 5 chr17 37482913 37483109 -47955371 - AluSg/x SINE Alu -5 305 110 3672 87 6 2 chr17 37483117 37483602 -47954878 - LTR15 LTR ERV1 -6 487 1 833 108 0 0 chr17 37483602 37483713 -47954767 - AluYb8 SINE Alu -207 111 1 10419 69 17 8 chr17 37484028 37485347 -47953133 - SVA Other Other 0 1386 57 287 24 0 24 chr17 37485350 37485391 -47953089 + (GGGAGA)n Simple_repeat Simple_repeat 4 43 0 635 215 23 0 chr17 37485422 37485552 -47952928 + FLAM_A SINE Alu 1 133 0 1417 206 14 24 chr17 37485570 37485680 -47952800 - MER68 LTR ERV1 0 562 452 2445 79 3 0 chr17 37485680 37485984 -47952496 + AluY SINE Alu 1 305 -6 1417 206 14 24 chr17 37485984 37486160 -47952320 - MER68 LTR ERV1 -110 452 279 778 165 31 0 chr17 37486150 37486277 -47952203 - MER68 LTR ERV1 -431 131 1 * 226 224 0 20 chr17 37486409 37486458 -47952022 + MIR SINE MIR 8 55 -207 358 217 0 0 chr17 37486569 37486638 -47951842 + MLT1A1 LTR MaLR 293 361 -4 393 318 91 48 chr17 37486839 37487091 -47951389 - L2 LINE L2 -13 3259 2997 357 123 0 77 chr17 37487091 37487120 -47951360 + AluJo SINE Alu 109 132 -170 1936 153 20 0 chr17 37487120 37487420 -47951060 + AluSx SINE Alu 1 306 -6 357 123 0 77 chr17 37487420 37487455 -47951025 + AluJo SINE Alu 132 168 -134 2177 122 0 3 chr17 37487901 37488189 -47950291 - AluSx SINE Alu -25 287 1 2212 115 3 16 chr17 37488194 37488506 -47949974 - AluSx SINE Alu 0 312 5 1780 184 14 3 chr17 37488512 37488805 -47949675 - AluJo SINE Alu -16 296 1 4158 195 57 75 chr17 37488818 37489456 -47949024 - L1MC4 LINE L1 -141 7901 7253 1525 194 14 7 chr17 37489456 37489750 -47948730 - AluJo SINE Alu -16 296 1 4158 195 57 75 chr17 37489750 37490244 -47948236 - L1MC4 LINE L1 -789 7253 6790 2493 77 3 3 chr17 37490244 37490555 -47947925 - AluSq SINE Alu -2 311 1 4158 195 57 75 chr17 37490555 37490649 -47947831 - L1MC4 LINE L1 -1252 6790 6696 1374 90 0 0 chr17 37490653 37490830 -47947650 + AluY SINE Alu 133 309 -2 729 219 153 29 chr17 37491002 37491273 -47947207 - L1MD3 LINE L1 -1223 6585 6296 250 309 0 0 chr17 37491280 37491335 -47947145 + AluJo SINE Alu 1 55 -247 2043 142 3 16 chr17 37491335 37491638 -47946842 + AluSx SINE Alu 1 299 -13 1498 156 0 39 chr17 37491638 37491892 -47946588 + AluJo SINE Alu 44 289 -23 1329 171 0 9 chr17 37491892 37492114 -47946366 - AluJb SINE Alu -23 289 70 2233 169 54 10 chr17 37492241 37492649 -47945831 - MSTB LTR MaLR 0 426 1 792 252 192 9 chr17 37492679 37492996 -47945484 - L1ME LINE L1 -5520 550 176 541 279 29 0 chr17 37493001 37493137 -47945343 - L1ME LINE L1 -5925 145 6 334 231 33 50 chr17 37493142 37493263 -47945217 - L1MC4a LINE L1 -1639 6169 6051 1757 162 14 14 chr17 37493309 37493599 -47944881 - AluJb SINE Alu -22 290 1 2153 99 20 7 chr17 37493937 37494230 -47944250 + AluSx SINE Alu 1 297 -15 471 245 49 28 chr17 37494230 37494373 -47944107 - MER5A DNA MER1_type -32 157 12 2204 62 26 49 chr17 37494442 37494747 -47943733 + AluSg SINE Alu 1 298 -12 2491 71 3 0 chr17 37495252 37495549 -47942931 + AluY SINE Alu 1 298 -13 1394 91 0 0 chr17 37495549 37495725 -47942755 + AluY SINE Alu 133 308 -3 33 0 0 0 chr17 37496016 37496049 -47942431 + AT_rich Low_complexity Low_complexity 1 33 0 631 168 134 17 chr17 37496342 37496461 -47942019 - FLAM_C SINE Alu 0 133 1 2431 94 0 7 chr17 37496717 37497025 -47941455 - AluSq SINE Alu -7 306 1 2047 111 3 44 chr17 37497034 37497349 -47941131 - AluSg SINE Alu -8 302 1 1801 167 31 3 chr17 37497634 37497928 -47940552 + AluSq SINE Alu 1 302 -11 21 0 0 0 chr17 37498226 37498247 -47940233 + AT_rich Low_complexity Low_complexity 1 21 0 785 162 15 29 chr17 37498610 37498746 -47939734 + FLAM_C SINE Alu 2 135 -8 2070 113 38 0 chr17 37498824 37499116 -47939364 - AluSg SINE Alu -7 303 1 2205 104 3 0 chr17 37499263 37499552 -47938928 - AluSg SINE Alu -20 290 1 2195 93 3 10 chr17 37499750 37500062 -47938418 - AluSp SINE Alu 0 313 1 238 100 0 0 chr17 37500069 37500109 -47938371 - L1MB3 LINE L1 0 6183 6144 238 260 96 0 chr17 37500325 37500398 -47938082 - L1MC5 LINE L1 -62 7899 7820 2509 61 3 0 chr17 37500521 37500831 -47937649 + AluY SINE Alu 1 311 0 399 274 66 77 chr17 37500876 37500991 -47937489 - L1M4 LINE L1 -1300 4846 4731 2112 114 0 0 chr17 37500991 37501272 -47937208 + AluSg SINE Alu 1 281 -29 399 274 66 77 chr17 37501272 37501518 -47936962 - L1M4 LINE L1 -1415 4731 4489 2017 101 0 20 chr17 37501519 37501817 -47936663 - AluSx SINE Alu -20 292 1 2111 228 98 20 chr17 37501840 37502205 -47936275 - L1MC4 LINE L1 -962 7080 6656 201 74 0 0 chr17 37502205 37502232 -47936248 + (TG)n Simple_repeat Simple_repeat 2 28 0 2111 228 98 20 chr17 37502232 37502415 -47936065 - L1MC4 LINE L1 -1386 6656 6489 786 248 26 0 chr17 37502423 37502576 -47935904 - FRAM SINE Alu -16 160 4 519 31 0 0 chr17 37502649 37502714 -47935766 + (TC)n Simple_repeat Simple_repeat 1 65 0 180 0 0 0 chr17 37503107 37503127 -47935353 + (TA)n Simple_repeat Simple_repeat 1 20 0 745 138 109 0 chr17 37503190 37503329 -47935151 + L1MB7 LINE L1 5357 5511 -667 744 84 0 0 chr17 37503329 37503424 -47935056 + AluSq/x SINE Alu 42 136 -176 2261 111 3 7 chr17 37503424 37503730 -47934750 + AluSx SINE Alu 1 305 -7 530 186 0 93 chr17 37503730 37503859 -47934621 + L1MB7 LINE L1 5506 5622 -552 1656 149 16 58 chr17 37503860 37504169 -47934311 + AluSx SINE Alu 1 296 -16 2035 152 77 12 chr17 37504170 37504572 -47933908 + L1MB7 LINE L1 5715 6142 -42 2336 99 3 0 chr17 37504586 37504889 -47933591 + AluSp SINE Alu 1 304 -9 2219 112 3 6 chr17 37504988 37505301 -47933179 + AluSx SINE Alu 1 312 0 2239 111 0 0 chr17 37505304 37505602 -47932878 + AluSg SINE Alu 1 298 -12 2388 72 3 13 chr17 37505645 37505952 -47932528 + AluY SINE Alu 1 304 -7 2198 103 3 0 chr17 37506094 37506386 -47932094 - AluSg SINE Alu -17 293 1 479 145 63 138 chr17 37507271 37507332 -47931148 - LTR45B LTR ERV1 0 489 425 1687 168 7 32 chr17 37507332 37507507 -47930973 - AluJo SINE Alu -6 306 141 2200 116 3 10 chr17 37507507 37507817 -47930663 - AluSx SINE Alu -4 308 1 1687 168 7 32 chr17 37507817 37507950 -47930530 - AluJo SINE Alu -171 141 6 479 145 63 138 chr17 37507950 37508047 -47930433 - LTR45B LTR ERV1 -64 425 343 1677 148 29 35 chr17 37508343 37508654 -47929826 - AluJb SINE Alu -3 309 1 1750 115 43 0 chr17 37508662 37508953 -47929527 - AluSx SINE Alu 0 349 48 338 123 15 15 chr17 37508953 37509018 -47929462 + AluSp/q SINE Alu 239 303 0 1690 152 68 13 chr17 37509194 37509504 -47928976 - LTR49-int LTR ERV1 -651 5680 5354 606 115 13 0 chr17 37509504 37509582 -47928898 + AluSp SINE Alu 115 193 -120 25 53 0 18 chr17 37509634 37509656 -47928824 + AT_rich Low_complexity Low_complexity 1 22 -34 2282 95 0 3 chr17 37509656 37509952 -47928528 + AluY SINE Alu 1 295 -16 25 53 0 18 chr17 37509952 37509986 -47928494 + AT_rich Low_complexity Low_complexity 22 56 0 1347 192 0 88 chr17 37510009 37510243 -47928237 - AluJo SINE Alu -13 299 101 900 158 0 0 chr17 37510243 37510376 -47928104 + FLAM_C SINE Alu 1 133 0 1347 192 0 88 chr17 37510376 37510469 -47928011 - AluJo SINE Alu -211 101 1 2212 119 0 3 chr17 37510531 37510833 -47927647 - AluSx SINE Alu -11 301 1 516 229 15 46 chr17 37510875 37511006 -47927474 + MIR SINE MIR 120 246 -16 432 273 150 20 chr17 37511072 37511369 -47927111 + L2 LINE L2 2938 3267 -5 869 197 15 6 chr17 37511854 37512195 -47926285 + L1M4 LINE L1 4741 5165 -981 1104 114 0 18 chr17 37512202 37512369 -47926111 + AluSg/x SINE Alu 136 299 -13 1343 223 11 15 chr17 37512369 37512505 -47925975 - AluJo SINE Alu -40 272 137 2240 109 3 6 chr17 37512505 37512817 -47925663 - AluSq SINE Alu -2 311 1 1343 223 11 15 chr17 37512817 37512953 -47925527 - AluJo SINE Alu -175 137 1 766 209 0 8 chr17 37512964 37513098 -47925382 - FLAM_C SINE Alu 0 133 1 1650 139 96 4 chr17 37513463 37513743 -47924737 + AluSx SINE Alu 1 306 -6 987 186 29 6 chr17 37513751 37513923 -47924557 + AluJb SINE Alu 118 293 -19 1698 178 3 13 chr17 37513933 37514237 -47924243 + AluJo SINE Alu 3 303 -9 1670 180 39 0 chr17 37514545 37514828 -47923652 + AluJb SINE Alu 1 294 -18 697 61 0 0 chr17 37515522 37515604 -47922876 + AluY SINE Alu 213 294 -17 1521 194 10 14 chr17 37515711 37515848 -47922632 + AluJb SINE Alu 1 137 -175 2433 77 0 0 chr17 37515848 37516146 -47922334 + AluY SINE Alu 1 298 -13 1521 194 10 14 chr17 37516146 37516297 -47922183 + AluJb SINE Alu 137 288 -24 1480 154 32 83 chr17 37516619 37516794 -47921686 - AluJo SINE Alu -16 296 142 2355 82 0 0 chr17 37516794 37517075 -47921405 - AluSx SINE Alu -31 281 1 1480 154 32 83 chr17 37517075 37517211 -47921269 - AluJo SINE Alu -170 142 1 645 111 0 44 chr17 37518196 37518286 -47920194 + AluS SINE Alu 5 90 -222 2111 133 3 0 chr17 37518404 37518705 -47919775 - AluSx SINE Alu -10 302 1 2313 67 0 7 chr17 37518710 37519021 -47919459 - AluY SINE Alu 0 309 1 21 0 0 0 chr17 37519769 37519790 -47918690 + AT_rich Low_complexity Low_complexity 1 21 0 1678 180 24 7 chr17 37519790 37520084 -47918396 - AluJo SINE Alu -13 299 1 1398 177 21 43 chr17 37520124 37520406 -47918074 + AluJb SINE Alu 25 300 -12 32 0 0 0 chr17 37520415 37520447 -47918033 + AT_rich Low_complexity Low_complexity 1 32 0 2116 137 0 3 chr17 37520484 37520777 -47917703 + AluSx SINE Alu 1 292 -20 346 217 0 0 chr17 37520781 37520841 -47917639 + AluJ/FLAM SINE Alu 1 60 -242 408 223 57 109 chr17 37520843 37521018 -47917462 - MER21B LTR ERV1 -425 438 273 556 104 13 0 chr17 37521033 37521110 -47917370 - MADE1 DNA Mariner 0 80 3 402 240 31 31 chr17 37521116 37521212 -47917268 - MER21B LTR ERV1 -767 96 1 23 33 0 0 chr17 37521242 37521272 -47917208 + AT_rich Low_complexity Low_complexity 1 30 0 2443 81 0 0 chr17 37521933 37522242 -47916238 - AluY SINE Alu -2 309 1 498 250 247 30 chr17 37522475 37522714 -47915766 + L1MC4a LINE L1 5643 5829 -1979 198 0 0 0 chr17 37522714 37522736 -47915744 + (TA)n Simple_repeat Simple_repeat 2 23 0 498 250 247 30 chr17 37522736 37522824 -47915656 + L1MC4a LINE L1 5829 6041 -1767 1842 143 43 0 chr17 37522966 37523246 -47915234 + AluSx SINE Alu 1 292 -20 867 181 66 72 chr17 37523304 37523540 -47914940 - L1MC5 LINE L1 -36 7925 7690 1621 119 171 8 chr17 37523540 37523791 -47914689 - AluSg SINE Alu -8 292 1 867 181 66 72 chr17 37523791 37523874 -47914606 - L1MC5 LINE L1 -271 7690 7608 1537 152 65 35 chr17 37523954 37524244 -47914236 + AluJb SINE Alu 1 299 -13 872 171 0 0 chr17 37524247 37524376 -47914104 + FLAM_C SINE Alu 2 130 -3 750 304 100 66 chr17 37524383 37524998 -47913482 + L1M4 LINE L1 35 628 -5768 2377 94 0 3 chr17 37524998 37525295 -47913185 + AluSx SINE Alu 1 296 -16 750 304 100 66 chr17 37525295 37525428 -47913052 + L1M4 LINE L1 628 755 -5641 2438 76 0 7 chr17 37525428 37525729 -47912751 + AluSx SINE Alu 1 299 -13 750 304 100 66 chr17 37525729 37525799 -47912681 + L1M4 LINE L1 755 882 -5514 632 110 40 20 chr17 37525802 37525902 -47912578 + AluSp/q SINE Alu 204 305 -8 1002 191 12 0 chr17 37525963 37526125 -47912355 + FAM SINE Alu 1 164 -11 246 235 87 17 chr17 37526191 37526306 -47912174 + L1M4 LINE L1 2339 2461 -3754 1462 244 46 87 chr17 37526328 37526786 -47911694 + L1M4 LINE L1 2639 3115 -3100 2223 127 0 3 chr17 37526786 37527094 -47911386 + AluSx SINE Alu 1 307 -5 1462 244 46 87 chr17 37527094 37527261 -47911219 + L1M4 LINE L1 3115 3233 -2982 2467 54 3 0 chr17 37527261 37527556 -47910924 + AluY SINE Alu 1 296 -15 1462 244 46 87 chr17 37527556 37527650 -47910830 + L1M4 LINE L1 3233 3329 -2886 1762 181 7 0 chr17 37527658 37527946 -47910534 + AluJo SINE Alu 1 290 -22 1171 270 56 74 chr17 37527970 37528492 -47909988 + L1M4 LINE L1 4051 4581 -1634 2257 114 0 13 chr17 37528492 37528808 -47909672 - AluSx SINE Alu 0 312 1 1171 270 56 74 chr17 37528808 37528851 -47909629 + L1M4 LINE L1 4581 4623 -1592 1585 177 41 10 chr17 37528851 37529145 -47909335 - AluJb SINE Alu -9 303 1 1171 270 56 74 chr17 37529145 37529455 -47909025 + L1M4 LINE L1 4623 4911 -1304 272 194 16 0 chr17 37529456 37529518 -47908962 + L1M4 LINE L1 5181 5243 -972 2108 111 17 3 chr17 37529519 37529807 -47908673 + AluSg SINE Alu 2 293 -17 22 0 0 0 chr17 37529876 37529898 -47908582 + AT_rich Low_complexity Low_complexity 1 22 0 490 268 0 51 chr17 37529906 37530044 -47908436 + FLAM_A SINE Alu 1 131 -2 1839 214 29 10 chr17 37530046 37530253 -47908227 + L1M4 LINE L1 5257 5459 -788 2113 107 20 20 chr17 37530253 37530552 -47907928 + AluSx SINE Alu 3 301 -11 1839 214 29 10 chr17 37530552 37530816 -47907664 + L1M4 LINE L1 5459 5736 -511 1690 182 26 16 chr17 37530816 37531123 -47907357 + AluJo SINE Alu 1 310 -2 1839 214 29 10 chr17 37531123 37531144 -47907336 + L1M4 LINE L1 5736 5755 -492 487 206 128 111 chr17 37531136 37531310 -47907170 + L1MC5 LINE L1 7510 7679 -282 * 2393 88 0 3 chr17 37531310 37531615 -47906865 + AluSg SINE Alu 1 304 -6 487 206 128 111 chr17 37531615 37531712 -47906768 + L1MC5 LINE L1 7679 7773 -188 1969 102 4 0 chr17 37531712 37531966 -47906514 - AluSq SINE Alu -20 293 39 487 206 128 111 chr17 37531966 37532006 -47906474 + L1MC5 LINE L1 7773 7811 -150 1799 161 10 3 chr17 37532006 37532297 -47906183 + AluSx SINE Alu 1 293 -19 487 206 128 111 chr17 37532297 37532380 -47906100 + L1MC5 LINE L1 7811 7913 -48 25 51 0 0 chr17 37533076 37533115 -47905365 + AT_rich Low_complexity Low_complexity 1 39 0 1635 139 121 4 chr17 37533317 37533590 -47904890 + AluSg1 SINE Alu 1 305 -4 285 281 0 24 chr17 37533723 37533805 -47904675 + MER116 DNA Mariner 1 80 0 1965 142 0 10 chr17 37533837 37534132 -47904348 + AluJo SINE Alu 1 292 -20 902 144 0 0 chr17 37534953 37535092 -47903388 + AluJb SINE Alu 169 307 -5 1052 157 92 5 chr17 37535092 37535277 -47903203 + MER46A DNA MER2_type 34 234 -2 1875 168 3 0 chr17 37537457 37537749 -47900731 + AluJb SINE Alu 1 293 -19 762 181 62 28 chr17 37537918 37538093 -47900387 - AluSg/x SINE Alu 0 312 133 2159 109 3 10 chr17 37538095 37538261 -47900219 - AluSx SINE Alu -12 300 135 1660 86 0 14 chr17 37538261 37538482 -47899998 - AluSg/x SINE Alu -11 301 84 2159 109 3 10 chr17 37538482 37538609 -47899871 - AluSx SINE Alu -177 135 9 1679 167 25 7 chr17 37538619 37538901 -47899579 - AluJb SINE Alu -25 287 1 1765 160 7 10 chr17 37539001 37539289 -47899191 - AluJo SINE Alu -15 297 11 1975 103 37 0 chr17 37539352 37539644 -47898836 - AluSx SINE Alu 0 302 1 2296 106 0 3 chr17 37539671 37539972 -47898508 + AluSx SINE Alu 1 300 -12 1992 124 0 0 chr17 37540095 37540368 -47898112 + AluSx SINE Alu 21 293 -19 214 192 13 39 chr17 37540395 37540473 -47898007 + (CATATA)n Simple_repeat Simple_repeat 6 81 0 2191 121 13 3 chr17 37540739 37541044 -47897436 - AluSp SINE Alu -5 308 1 667 183 0 56 chr17 37541573 37541699 -47896781 - FLAM_A SINE Alu -9 133 15 411 58 0 0 chr17 37541814 37541866 -47896614 + Alu SINE Alu 2 52 -260 2168 80 0 0 chr17 37541866 37542130 -47896350 - AluSg SINE Alu -46 264 1 441 134 8 55 chr17 37542137 37542264 -47896216 + (TTCC)n Simple_repeat Simple_repeat 1 121 0 1728 140 104 0 chr17 37542275 37542554 -47895926 - AluSx SINE Alu -4 308 1 1946 121 29 21 chr17 37542809 37543117 -47895363 + AluSx SINE Alu 1 310 0 490 179 236 0 chr17 37544035 37544141 -47894339 - FLAM_C SINE Alu -11 132 2 481 198 0 21 chr17 37544177 37544273 -47894207 - AluJo SINE Alu -92 220 127 598 220 47 112 chr17 37544307 37544344 -47894136 - MIR SINE MIR -38 224 186 1852 167 0 3 chr17 37544344 37544632 -47893848 + AluJo SINE Alu 1 287 -25 598 220 47 112 chr17 37544632 37544683 -47893797 - MIR SINE MIR -76 186 133 2313 89 21 0 chr17 37544683 37544974 -47893506 - AluSg SINE Alu -13 297 1 598 220 47 112 chr17 37544974 37545098 -47893382 - MIR SINE MIR -129 133 25 1949 118 89 0 chr17 37545204 37545484 -47892996 + AluSx SINE Alu 1 305 -7 1974 148 30 10 chr17 37545786 37546091 -47892389 - AluSx SINE Alu -1 311 1 2258 100 0 3 chr17 37546115 37546406 -47892074 - AluSc SINE Alu -17 292 3 784 159 0 0 chr17 37546420 37546546 -47891934 - FLAM_C SINE Alu -7 126 1 2581 71 0 0 chr17 37546888 37547196 -47891284 - AluSx SINE Alu -4 308 1 2270 108 0 10 chr17 37547950 37548246 -47890234 - AluSx SINE Alu -15 297 5 22 56 0 0 chr17 37548449 37548485 -47889995 + AT_rich Low_complexity Low_complexity 1 36 0 1748 168 49 7 chr17 37548598 37548714 -47889766 + AluJo SINE Alu 3 113 -199 2398 88 10 0 chr17 37548714 37549019 -47889461 + AluSp SINE Alu 1 308 -5 2602 60 0 13 chr17 37549019 37549334 -47889146 + AluY SINE Alu 1 311 0 1748 168 49 7 chr17 37549334 37549502 -47888978 + AluJo SINE Alu 112 300 -12 2146 125 0 10 chr17 37550126 37550431 -47888049 - AluSq SINE Alu 0 313 12 514 193 18 105 chr17 37551156 37551226 -47887254 - AluJo/FRAM SINE Alu -22 290 215 2141 118 6 29 chr17 37551226 37551541 -47886939 - AluSx SINE Alu -4 308 1 514 193 18 105 chr17 37551541 37551641 -47886839 - AluJo/FRAM SINE Alu -97 215 135 1875 114 100 7 chr17 37551865 37551994 -47886486 + AluSx SINE Alu 1 117 -195 2291 120 7 0 chr17 37551994 37552295 -47886185 + AluSx SINE Alu 3 305 -7 1875 114 100 7 chr17 37552295 37552446 -47886034 + AluSx SINE Alu 117 307 -5 1220 195 17 30 chr17 37552474 37552710 -47885770 + AluJo SINE Alu 9 241 -71 1380 160 30 63 chr17 37552726 37552995 -47885485 + AluJo SINE Alu 37 296 -16 1711 165 6 47 chr17 37554794 37554980 -47883500 - AluJo SINE Alu -4 308 139 1803 167 7 3 chr17 37554980 37555279 -47883201 - AluJb SINE Alu -12 300 1 1711 165 6 47 chr17 37555279 37555413 -47883067 - AluJo SINE Alu -173 139 1 2441 79 0 13 chr17 37555491 37555795 -47882685 - AluY SINE Alu -11 300 1 1941 113 4 0 chr17 37555931 37556187 -47882293 + AluSq SINE Alu 1 257 -56 393 86 17 0 chr17 37556287 37556345 -47882135 + AluSq SINE Alu 233 291 -12 698 47 0 0 chr17 37556621 37556707 -47881773 + AluSq/x SINE Alu 54 139 -174 1133 54 0 0 chr17 37556707 37556836 -47881644 - AluY SINE Alu -182 129 1 29 60 0 0 chr17 37558000 37558050 -47880430 + AT_rich Low_complexity Low_complexity 1 50 0 2335 102 10 3 chr17 37558630 37558935 -47879545 - AluSx SINE Alu -5 307 1 777 134 0 0 chr17 37559300 37559454 -47879026 - FLAM_A SINE Alu 0 154 1 26 30 0 0 chr17 37559580 37559613 -47878867 + AT_rich Low_complexity Low_complexity 1 33 0 1967 98 8 0 chr17 37561405 37561661 -47876819 + AluSg1 SINE Alu 51 308 -1 2229 141 0 0 chr17 37562292 37562598 -47875882 - AluSx SINE Alu -6 306 1 2081 90 61 0 chr17 37562797 37563075 -47875405 - AluSp SINE Alu -18 295 1 2304 87 7 0 chr17 37563179 37563479 -47875001 - AluY SINE Alu -9 302 1 1635 132 48 58 chr17 37563557 37563852 -47874628 - AluJo SINE Alu -20 292 1 296 243 29 0 chr17 37564367 37564437 -47874043 + L2 LINE L2 3241 3312 -1 243 234 64 32 chr17 37564484 37564578 -47873902 + MIR SINE MIR 33 129 -79 363 23 0 0 chr17 37564636 37564680 -47873800 + (CA)n Simple_repeat Simple_repeat 2 45 0 2340 81 37 7 chr17 37564764 37565062 -47873418 + AluSq SINE Alu 5 311 -2 2413 98 0 0 chr17 37566475 37566782 -47871698 + AluSx SINE Alu 1 307 -5 202 323 83 10 chr17 37567684 37567780 -47870700 + MIR3 SINE MIR 10 112 -96 2383 100 0 3 chr17 37568866 37569175 -47869305 + AluSx SINE Alu 1 308 -4 347 336 94 0 chr17 37570931 37571080 -47867400 - MIR SINE MIR -19 243 81 * 396 340 7 14 chr17 37571078 37571225 -47867255 - MIR3 SINE MIR -43 165 20 185 274 14 55 chr17 37572256 37572329 -47866151 + MIR3 SINE MIR 99 168 -40 2329 103 0 13 chr17 37572415 37572727 -47865753 - AluSx SINE Alu -4 308 1 842 215 0 11 chr17 37572736 37572913 -47865567 - FAM SINE Alu 0 175 1 1989 143 3 16 chr17 37573398 37573705 -47864775 - AluJb SINE Alu -9 303 1 191 220 20 0 chr17 37573814 37573864 -47864616 + MIR SINE MIR 85 135 -73 2141 110 21 0 chr17 37573981 37574271 -47864209 - AluSp SINE Alu -17 296 1 1329 114 81 76 chr17 37574516 37574608 -47863872 + AluSx SINE Alu 49 139 -173 3013 9 0 0 chr17 37574608 37574926 -47863554 + AluYb8 SINE Alu 1 318 0 1329 114 81 76 chr17 37574926 37575069 -47863411 + AluSx SINE Alu 139 285 -27 2142 116 14 0 chr17 37575387 37575681 -47862799 + AluSx SINE Alu 1 298 -14 2049 131 14 0 chr17 37576645 37576935 -47861545 + AluSx SINE Alu 1 294 -18 2414 105 0 0 chr17 37576971 37577277 -47861203 + AluY SINE Alu 1 306 -5 216 206 127 0 chr17 37577551 37577614 -47860866 - MIR SINE MIR -66 196 126 615 192 33 0 chr17 37578343 37578463 -47860017 - FLAM_A SINE Alu -9 124 1 2192 138 3 0 chr17 37578580 37578885 -47859595 + AluSx SINE Alu 1 306 -6 1042 142 31 0 chr17 37578889 37579051 -47859429 + AluSg/x SINE Alu 129 295 -15 23 0 0 0 chr17 37580796 37580819 -47857661 + AT_rich Low_complexity Low_complexity 1 23 0 2570 67 0 0 chr17 37580820 37581117 -47857363 + AluSx SINE Alu 1 297 -15 271 252 65 59 chr17 37581800 37581958 -47856522 - MIR SINE MIR -55 153 29 239 217 17 61 chr17 37582684 37582826 -47855654 + G-rich Low_complexity Low_complexity 1 135 0 201 163 0 61 chr17 37583620 37583669 -47854811 + C-rich Low_complexity Low_complexity 3 48 0 399 298 0 0 chr17 37587129 37587414 -47851066 + (TG)n Simple_repeat Simple_repeat 1 285 0 2339 80 0 0 chr17 37589229 37589529 -47848951 - AluY SINE Alu -11 300 1 271 250 193 57 chr17 37589530 37589706 -47848774 + MIR SINE MIR 63 262 0 2114 125 0 0 chr17 37589724 37590028 -47848452 + AluSx SINE Alu 1 304 -8 1698 145 76 0 chr17 37590036 37590312 -47848168 - AluJo SINE Alu -15 297 1 2197 88 0 19 chr17 37590314 37590622 -47847858 - AluSg SINE Alu -8 302 1 2126 100 4 0 chr17 37590654 37590957 -47847523 + AluSp SINE Alu 1 304 0 417 189 256 0 chr17 37590957 37591047 -47847433 - AluJo/FLAM SINE Alu -188 114 2 2171 113 0 0 chr17 37591050 37591369 -47847111 - AluSg SINE Alu 0 319 1 2072 123 3 3 chr17 37591389 37591691 -47846789 - AluSq SINE Alu -11 302 1 1930 128 10 3 chr17 37591868 37592156 -47846324 - AluSg SINE Alu -18 292 3 1656 126 49 8 chr17 37592158 37592405 -47846075 - AluSg SINE Alu -19 291 35 1984 131 3 0 chr17 37592417 37592720 -47845760 - AluSx SINE Alu 0 304 1 377 229 29 67 chr17 37592991 37593179 -47845301 + MIR SINE MIR 3 185 -58 243 267 0 35 chr17 37595195 37595281 -47843199 + CT-rich Low_complexity Low_complexity 3 85 0 288 312 108 45 chr17 37596759 37596937 -47841543 + MIR SINE MIR 13 200 -62 1289 175 13 0 chr17 37597091 37597319 -47841161 - AluJo SINE Alu -1 311 81 237 279 87 10 chr17 37597572 37597676 -47840804 + MIR SINE MIR 74 185 -77 2159 75 0 11 chr17 37597703 37598033 -47840447 - AluSc SINE Alu 0 327 1 1929 105 10 46 chr17 37598115 37598273 -47840207 - AluSx SINE Alu -18 294 151 2179 111 3 0 chr17 37598273 37598571 -47839909 - AluSg SINE Alu -11 299 1 1929 105 10 46 chr17 37598571 37598717 -47839763 - AluSx SINE Alu -161 151 1 256 252 19 28 chr17 37598717 37598824 -47839656 + MIR SINE MIR 101 206 -56 633 216 111 40 chr17 37598869 37599058 -47839422 + MIR SINE MIR 16 221 -41 1972 138 0 0 chr17 37599058 37599371 -47839109 + AluSx SINE Alu 1 312 0 676 244 108 79 chr17 37599415 37599575 -47838905 - L1MC4 LINE L1 0 8042 7888 930 129 0 0 chr17 37599575 37599707 -47838773 + FLAM_C SINE Alu 2 133 0 676 244 108 79 chr17 37599707 37599762 -47838718 - L1MC4 LINE L1 -154 7888 7836 2217 120 0 16 chr17 37599762 37600079 -47838401 - AluSx SINE Alu 0 312 1 676 244 108 79 chr17 37600079 37600175 -47838305 - L1MC4 LINE L1 -206 7836 7744 1944 127 10 7 chr17 37600175 37600466 -47838014 - AluSq SINE Alu -16 297 6 676 244 108 79 chr17 37600466 37600535 -47837945 - L1MC4 LINE L1 -298 7744 7678 1993 123 0 33 chr17 37600535 37600835 -47837645 - AluSx SINE Alu -22 290 1 2259 89 30 0 chr17 37600843 37601145 -47837335 - AluY SINE Alu 0 311 1 2158 99 41 0 chr17 37601146 37601440 -47837040 - AluY SINE Alu -5 306 1 676 244 108 79 chr17 37601440 37601602 -47836878 - L1MC4 LINE L1 -369 7673 7470 405 313 46 0 chr17 37601612 37601743 -47836737 + MIR SINE MIR 126 262 0 1668 156 29 19 chr17 37601769 37602076 -47836404 + AluJo SINE Alu 1 310 -2 377 308 113 22 chr17 37602584 37602769 -47835711 + MIR3 SINE MIR 4 205 -3 398 233 67 17 chr17 37604015 37604135 -47834345 - MIR3 SINE MIR -49 159 34 2199 79 38 7 chr17 37607291 37607583 -47830897 - AluSq SINE Alu -8 305 5 381 22 0 0 chr17 37607667 37607713 -47830767 + (TG)n Simple_repeat Simple_repeat 2 47 0 272 234 64 32 chr17 37607771 37607865 -47830615 - MIR SINE MIR -79 129 33 339 294 221 36 chr17 37607912 37608188 -47830292 - L2 LINE L2 -1 3271 2945 329 355 147 37 chr17 37608251 37608497 -47829983 - L2 LINE L2 -494 2820 2602 1535 144 45 55 chr17 37608497 37608809 -47829671 + AluJo SINE Alu 1 309 -3 329 355 147 37 chr17 37608809 37608870 -47829610 - L2 LINE L2 -712 2602 2549 2335 85 7 0 chr17 37608870 37609177 -47829303 + AluSg SINE Alu 1 309 -1 329 355 147 37 chr17 37609177 37609190 -47829290 - L2 LINE L2 -765 2549 2539 2156 107 27 0 chr17 37609190 37609490 -47828990 + AluSx SINE Alu 1 308 -4 329 355 147 37 chr17 37609490 37609627 -47828853 - L2 LINE L2 -775 2539 2418 2055 136 7 0 chr17 37609627 37609936 -47828544 + AluSx SINE Alu 1 311 -1 329 355 147 37 chr17 37609936 37609993 -47828487 - L2 LINE L2 -896 2418 2246 249 295 171 31 chr17 37610018 37610147 -47828333 - MIR SINE MIR -108 154 8 2230 113 0 0 chr17 37610277 37610587 -47827893 + AluSx SINE Alu 3 312 0 1775 104 30 190 chr17 37611027 37611348 -47827132 - LTR12 LTR ERV1 -234 1946 1575 2427 81 0 0 chr17 37611348 37611658 -47826822 - AluSg SINE Alu 0 310 1 1775 104 30 190 chr17 37611658 37611906 -47826574 - LTR12 LTR ERV1 -605 1575 55 234 250 0 0 chr17 37611906 37611958 -47826522 - LTR30 LTR ERV1 -670 52 1 209 390 0 0 chr17 37612024 37612083 -47826397 + L2 LINE L2 3123 3181 -91 1539 146 47 25 chr17 37612088 37612392 -47826088 + AluJb SINE Alu 5 314 0 195 42 0 0 chr17 37612455 37612479 -47826001 + (TGAA)n Simple_repeat Simple_repeat 3 26 0 219 203 0 0 chr17 37612532 37612591 -47825889 + T-rich Low_complexity Low_complexity 1 59 0 330 337 119 24 chr17 37613130 37613668 -47824812 - L2 LINE L2 -48 3224 2606 341 250 0 0 chr17 37616150 37616218 -47822262 + MER5A DNA MER1_type 4 71 -118 944 61 0 38 chr17 37616223 37616354 -47822126 + AluSq/x SINE Alu 1 126 -186 252 0 0 0 chr17 37616354 37616382 -47822098 + (CAA)n Simple_repeat Simple_repeat 3 30 0 1972 105 0 11 chr17 37616384 37616661 -47821819 + AluSx SINE Alu 1 274 -38 645 116 0 0 chr17 37616661 37616756 -47821724 + AluSg/x SINE Alu 212 306 -3 1625 139 75 0 chr17 37616760 37617112 -47821368 + AluSx SINE Alu 1 312 0 250 299 264 0 chr17 37617113 37617200 -47821280 + MER5A DNA MER1_type 74 183 -6 832 119 0 77 chr17 37617200 37617343 -47821137 + FLAM_C SINE Alu 1 132 -1 212 264 104 28 chr17 37617373 37617479 -47821001 + L2 LINE L2 3139 3252 -20 266 325 13 0 chr17 37617777 37617854 -47820626 + MIR SINE MIR 79 156 -106 2135 96 0 4 chr17 37617862 37618143 -47820337 + AluSx SINE Alu 12 291 -21 782 262 0 24 chr17 37618385 37618595 -47819885 + MIR SINE MIR 33 237 -25 2139 109 7 13 chr17 37618636 37618940 -47819540 + AluSx SINE Alu 1 302 -10 221 226 38 0 chr17 37619218 37619271 -47819209 + MIR SINE MIR 75 129 -133 519 297 13 13 chr17 37619361 37619516 -47818964 + MIR SINE MIR 29 183 -79 743 279 48 15 chr17 37620028 37620102 -47818378 - L2 LINE L2 -82 3231 3161 2129 110 33 3 chr17 37620102 37620401 -47818079 - AluSq SINE Alu -5 308 1 743 279 48 15 chr17 37620401 37620595 -47817885 - L2 LINE L2 -152 3161 2954 183 259 129 12 chr17 37620594 37620679 -47817801 + MIR SINE MIR 97 191 -71 * 815 202 29 12 chr17 37620682 37620855 -47817625 - L2 LINE L2 -3 3310 3135 2371 90 0 0 chr17 37620855 37621167 -47817313 + AluSp SINE Alu 1 312 -1 1387 172 0 23 chr17 37621176 37621432 -47817048 + AluJo SINE Alu 63 312 0 743 197 0 7 chr17 37621480 37621617 -47816863 + FLAM_A SINE Alu 6 141 -1 198 291 29 29 chr17 37621635 37621738 -47816742 - L2 LINE L2 -229 3084 2982 1886 143 3 13 chr17 37621819 37622120 -47816360 - AluJb SINE Alu -13 299 2 554 117 0 11 chr17 37622256 37622350 -47816130 + (TCCC)n Simple_repeat Simple_repeat 4 96 0 2139 62 0 18 chr17 37622364 37622640 -47815840 - AluY SINE Alu -40 271 1 2283 93 3 0 chr17 37622642 37622944 -47815536 - AluSp SINE Alu -10 303 1 285 287 33 57 chr17 37622944 37623066 -47815414 - L2 LINE L2 -11 3261 3143 388 296 90 64 chr17 37623162 37623395 -47815085 + L2 LINE L2 3030 3268 -4 2118 118 10 0 chr17 37623930 37624235 -47814245 + AluSx SINE Alu 1 308 -4 1280 102 0 0 chr17 37624235 37624412 -47814068 + AluSg/x SINE Alu 134 310 -2 2170 66 16 20 chr17 37624800 37625103 -47813377 - AluSc SINE Alu -7 302 1 2411 41 7 0 chr17 37625398 37625690 -47812790 - AluY SINE Alu -17 294 1 629 41 0 0 chr17 37625889 37625962 -47812518 + tRNA-Cys-TGC tRNA tRNA 1 73 -2 629 41 0 0 chr17 37626646 37626719 -47811761 + tRNA-Cys-TGC tRNA tRNA 1 73 -2 601 158 189 0 chr17 37626839 37626966 -47811514 + MER5A DNA MER1_type 1 151 -38 708 108 10 0 chr17 37626968 37627070 -47811410 + FRAM SINE Alu 59 161 -15 414 0 0 0 chr17 37627071 37627117 -47811363 + (CA)n Simple_repeat Simple_repeat 2 47 0 243 88 0 0 chr17 37627647 37627681 -47810799 + (T)n Simple_repeat Simple_repeat 1 34 0 360 244 28 39 chr17 37628743 37628923 -47809557 + C-rich Low_complexity Low_complexity 3 180 0 502 240 62 8 chr17 37630291 37630420 -47808060 + MIR SINE MIR 18 153 -55 227 316 13 0 chr17 37630856 37630935 -47807545 + L3b LINE CR1 1296 1375 -208 193 262 184 39 chr17 37631481 37631584 -47806896 + MIR SINE MIR 30 147 -61 797 158 0 0 chr17 37631590 37631710 -47806770 + FLAM_C SINE Alu 3 122 -21 1116 66 0 0 chr17 37631717 37631854 -47806626 + AluSx SINE Alu 1 137 -175 22 35 0 0 chr17 37631868 37631897 -47806583 + AT_rich Low_complexity Low_complexity 1 29 0 1194 132 11 0 chr17 37631899 37632081 -47806399 + AluSx SINE Alu 127 310 0 798 184 40 33 chr17 37632084 37632236 -47806244 + AluJo/FRAM SINE Alu 137 289 -13 293 269 289 29 chr17 37632399 37632641 -47805839 + L2 LINE L2 2976 3280 -33 186 103 0 0 chr17 37632650 37632679 -47805801 + (TGAG)n Simple_repeat Simple_repeat 1 29 0 270 136 0 0 chr17 37632752 37632796 -47805684 + (TCCCC)n Simple_repeat Simple_repeat 5 48 0 717 159 98 54 chr17 37632980 37633196 -47805284 - LTR26E LTR ERV1 0 622 344 2443 75 0 7 chr17 37633196 37633503 -47804977 + AluSg SINE Alu 1 305 -5 717 159 98 54 chr17 37633503 37633571 -47804909 - LTR26E LTR ERV1 -278 344 280 1223 131 0 0 chr17 37633574 37633750 -47804730 - FRAM SINE Alu -8 168 1 38 0 0 0 chr17 37633750 37633788 -47804692 + AT_rich Low_complexity Low_complexity 1 38 0 1269 187 127 26 chr17 37633790 37634057 -47804423 - AluJo SINE Alu -8 294 1 2118 128 0 0 chr17 37634081 37634385 -47804095 + AluSx SINE Alu 1 304 -8 706 94 0 0 chr17 37634385 37634481 -47803999 - LTR26E LTR ERV1 -526 96 1 437 335 54 10 chr17 37634518 37634721 -47803759 - MIR SINE MIR -48 214 3 201 175 0 0 chr17 37634794 37634834 -47803646 + C-rich Low_complexity Low_complexity 4 43 0 930 252 46 0 chr17 37635350 37635588 -47802892 + MIR SINE MIR 14 262 0 310 314 15 57 chr17 37636086 37636313 -47802167 - MIR SINE MIR -25 237 20 2303 94 3 0 chr17 37637287 37637596 -47800884 - AluSq SINE Alu -3 310 1 1708 159 0 43 chr17 37637618 37637920 -47800560 + AluJb SINE Alu 1 289 -23 481 318 35 6 chr17 37638016 37638189 -47800291 - MER117 DNA MER1_type -16 181 4 916 163 0 65 chr17 37638257 37638441 -47800039 + MER20 DNA MER1_type 16 187 -32 4566 144 43 28 chr17 37638443 37639119 -47799361 + L1MB3 LINE L1 5305 5998 -185 1724 172 3 13 chr17 37639119 37639422 -47799058 + AluJo SINE Alu 1 300 -12 4566 144 43 28 chr17 37639422 37639610 -47798870 + L1MB3 LINE L1 5998 6182 -1 345 100 20 0 chr17 37639616 37639666 -47798814 + MER20 DNA MER1_type 169 219 0 639 170 16 129 chr17 37639769 37639847 -47798633 + MER5B DNA MER1_type 1 86 -92 2411 69 0 0 chr17 37639847 37640151 -47798329 + AluY SINE Alu 1 304 -7 639 170 16 129 chr17 37640151 37640247 -47798233 + MER5B DNA MER1_type 86 153 -25 409 326 122 13 chr17 37640247 37640477 -47798003 + MIR SINE MIR 4 258 -4 244 260 0 21 chr17 37641495 37641591 -47796889 + (TG)n Simple_repeat Simple_repeat 1 94 0 21 0 0 0 chr17 37641664 37641685 -47796795 + AT_rich Low_complexity Low_complexity 1 21 0 2603 270 91 64 chr17 37641688 37642216 -47796264 - HAL1 LINE L1 -6 2501 1989 1527 188 33 10 chr17 37642216 37642520 -47795960 + AluJb SINE Alu 1 311 -1 2603 270 91 64 chr17 37642520 37642874 -47795606 - HAL1 LINE L1 -518 1989 1646 2075 111 0 14 chr17 37642874 37643171 -47795309 - AluSx SINE Alu -11 301 9 2603 270 91 64 chr17 37643171 37643808 -47794672 - HAL1 LINE L1 -861 1646 939 225 188 62 62 chr17 37643823 37643903 -47794577 + MER96B DNA MER1_type? 182 261 -156 921 104 0 8 chr17 37643903 37644037 -47794443 + FLAM_C SINE Alu 1 133 -10 714 181 19 25 chr17 37644039 37644199 -47794281 + MER96B DNA MER1_type? 257 415 -2 244 324 81 36 chr17 37644593 37644658 -47793822 + MER5A DNA MER1_type 68 141 -48 180 0 0 0 chr17 37644658 37644678 -47793802 + (TTG)n Simple_repeat Simple_repeat 2 21 0 244 324 81 36 chr17 37644678 37644723 -47793757 + MER5A DNA MER1_type 141 183 -6 2087 113 3 7 chr17 37644755 37645057 -47793423 - AluSx SINE Alu -11 301 1 578 338 92 36 chr17 37645264 37645764 -47792716 + L3 LINE CR1 705 1232 -345 2001 144 3 3 chr17 37645796 37646108 -47792372 - AluSx SINE Alu 0 312 1 2444 68 10 0 chr17 37646168 37646476 -47792004 - AluY SINE Alu 0 311 1 304 236 16 89 chr17 37646476 37646525 -47791955 + L2 LINE L2 3115 3166 -147 1815 143 0 26 chr17 37646525 37646832 -47791648 + AluJo SINE Alu 1 299 -13 304 236 16 89 chr17 37646832 37646905 -47791575 + L2 LINE L2 3166 3228 -85 2200 117 3 0 chr17 37648801 37649110 -47789370 + AluSx SINE Alu 3 312 0 245 313 0 12 chr17 37649183 37649266 -47789214 + MIR SINE MIR 35 116 -146 3799 133 47 64 chr17 37649544 37649590 -47788890 - L1MB5 LINE L1 0 6174 6129 1936 93 25 7 chr17 37649590 37649896 -47788584 + AluSx SINE Alu 1 311 0 3799 133 47 64 chr17 37649896 37649976 -47788504 - L1MB5 LINE L1 -45 6129 6049 1966 157 0 0 chr17 37649976 37650281 -47788199 - AluJb SINE Alu -7 305 1 3799 133 47 64 chr17 37650281 37650645 -47787835 - L1MB5 LINE L1 -125 6049 5680 1033 52 0 58 chr17 37650645 37650836 -47787644 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 2069 93 0 4 chr17 37650837 37651115 -47787365 - AluSc SINE Alu -32 277 1 2189 120 0 0 chr17 37651115 37651415 -47787065 - AluSx SINE Alu -11 301 2 3799 133 47 64 chr17 37651415 37651426 -47787054 - L1MB5 LINE L1 -493 5681 5671 2171 105 0 3 chr17 37651426 37651722 -47786758 - AluSg SINE Alu -14 296 2 3799 133 47 64 chr17 37651722 37651932 -47786548 - L1MB5 LINE L1 -503 5671 5468 2249 82 0 7 chr17 37651932 37652224 -47786256 + AluSq SINE Alu 1 290 -23 443 267 0 0 chr17 37652243 37652333 -47786147 - L1MC4 LINE L1 -1339 6703 6614 399 21 0 0 chr17 37652359 37652407 -47786073 + (GA)n Simple_repeat Simple_repeat 2 49 0 784 127 7 86 chr17 37652410 37652483 -47785997 - L1M4 LINE L1 -710 5464 5387 2204 64 54 10 chr17 37652483 37652778 -47785702 - AluY SINE Alu -3 308 1 784 127 7 86 chr17 37652778 37652921 -47785559 - L1M4 LINE L1 -787 5387 5271 266 253 145 0 chr17 37653228 37653311 -47785169 + MIR SINE MIR 103 197 -65 305 307 40 0 chr17 37653434 37653535 -47784945 + MER5A DNA MER1_type 2 106 -83 3296 165 39 19 chr17 37653550 37654143 -47784337 + MER6A DNA MER2_type 1 605 0 2343 87 0 0 chr17 37654180 37654480 -47784000 - AluSq SINE Alu -13 300 1 558 339 28 3 chr17 37654533 37654819 -47783661 + L1ME4a LINE L1 5654 5946 -175 1627 152 7 14 chr17 37655350 37655633 -47782847 + AluJb SINE Alu 17 297 -15 517 269 113 0 chr17 37655671 37655831 -47782649 - MIR SINE MIR -74 188 11 1798 143 3 3 chr17 37655853 37656139 -47782341 - AluJo SINE Alu -24 288 3 435 223 29 0 chr17 37656271 37656374 -47782106 - MER5A DNA MER1_type -80 109 4 266 366 41 45 chr17 37656848 37656962 -47781518 - MIR SINE MIR -2 260 147 2163 102 3 0 chr17 37656962 37657257 -47781223 + AluSq SINE Alu 1 296 -17 266 366 41 45 chr17 37657257 37657388 -47781092 - MIR SINE MIR -115 147 16 1102 271 49 49 chr17 37657909 37658045 -47780435 - MLT1J LTR MaLR -143 368 233 1931 98 91 7 chr17 37658045 37658331 -47780149 - AluSx SINE Alu -2 310 1 1791 126 8 0 chr17 37658340 37658601 -47779879 - AluSx SINE Alu -13 299 37 1102 271 49 49 chr17 37658601 37658820 -47779660 - MLT1J LTR MaLR -285 226 3 1147 265 17 17 chr17 37659017 37659311 -47779169 - MER4D LTR ERV1 -36 867 574 902 128 0 23 chr17 37659311 37659444 -47779036 + FLAM_C SINE Alu 1 130 -3 1304 98 26 41 chr17 37659458 37659693 -47778787 + AluSp SINE Alu 1 305 -8 794 141 134 47 chr17 37659696 37659845 -47778635 + AluJo SINE Alu 137 298 -4 1553 99 144 15 chr17 37660038 37660301 -47778179 + AluSg1 SINE Alu 1 297 -12 1775 107 54 4 chr17 37660320 37660600 -47777880 - MER49 LTR ERV1 -629 294 1 1821 139 3 3 chr17 37660699 37660986 -47777494 - AluJb SINE Alu -22 290 4 956 106 21 0 chr17 37660997 37661139 -47777341 - L1MA5A LINE L1 -4 6293 6149 1978 136 7 3 chr17 37661951 37662259 -47776221 + AluSq SINE Alu 4 312 -1 395 176 8 42 chr17 37662275 37662394 -47776086 + GA-rich Low_complexity Low_complexity 2 116 0 1536 156 0 41 chr17 37662701 37662971 -47775509 - AluJo SINE Alu -21 291 33 266 277 109 10 chr17 37663287 37663388 -47775092 + MLT1L LTR MaLR 372 482 -133 186 252 54 108 chr17 37664034 37664145 -47774335 - L2 LINE L2 0 3272 3168 2123 99 6 16 chr17 37664307 37664619 -47773861 - AluSx SINE Alu -3 309 1 304 278 33 11 chr17 37664620 37664710 -47773770 + MIR SINE MIR 98 189 -73 294 331 71 7 chr17 37666014 37666168 -47772312 - L2 LINE L2 -214 3058 2895 623 259 6 19 chr17 37666280 37666442 -47772038 - MLT1J LTR MaLR -131 380 221 1910 125 3 33 chr17 37666587 37666890 -47771590 - AluJb SINE Alu -14 298 5 1962 203 26 34 chr17 37667070 37667539 -47770941 - MLT1C LTR MaLR -2 465 1 1269 114 0 0 chr17 37667831 37668007 -47770473 + AluSg/x SINE Alu 137 312 0 2124 115 0 0 chr17 37668869 37669164 -47769316 + AluSx SINE Alu 1 295 -17 1942 100 60 0 chr17 37670312 37670593 -47767887 - AluSx SINE Alu -14 298 1 267 269 179 41 chr17 37672444 37672589 -47765891 + MIR SINE MIR 98 262 0 622 297 43 92 chr17 37673088 37673502 -47764978 - L2 LINE L2 -1 3271 2878 2304 96 0 6 chr17 37673502 37673816 -47764664 + AluSx SINE Alu 1 312 0 679 182 53 8 chr17 37673840 37673972 -47764508 + FLAM_C SINE Alu 1 138 -5 469 335 136 32 chr17 37674011 37674453 -47764027 - L2 LINE L2 -579 2735 2248 439 267 50 56 chr17 37674955 37675135 -47763345 + MIR3 SINE MIR 19 197 -11 217 287 74 56 chr17 37675537 37675645 -47762835 - L2 LINE L2 -5 3267 3158 1628 188 3 0 chr17 37675661 37675948 -47762532 - AluJo SINE Alu -20 292 5 564 336 55 0 chr17 37676083 37676300 -47762180 + MIR SINE MIR 3 231 -31 2369 79 0 0 chr17 37676588 37676891 -47761589 - AluSx SINE Alu -9 303 1 1176 169 49 56 chr17 37676895 37677208 -47761272 - AluJo SINE Alu 0 311 1 2043 76 4 0 chr17 37677224 37677487 -47760993 - AluY SINE Alu -15 296 33 345 24 0 0 chr17 37677704 37677746 -47760734 + (TG)n Simple_repeat Simple_repeat 2 43 0 718 331 68 18 chr17 37677770 37678096 -47760384 - L1MC4a LINE L1 -1926 5882 5541 274 283 20 20 chr17 37678194 37678293 -47760187 + MIR SINE MIR 159 257 -5 551 186 10 0 chr17 37879472 37879569 -47558911 - AluSg/x SINE Alu -77 233 136 1775 135 4 0 chr17 37879605 37879872 -47558608 + AluSx SINE Alu 40 307 -5 1506 203 196 30 chr17 37879975 37880281 -47558199 + MER50 LTR ERV1 235 634 -100 2219 85 0 7 chr17 37880281 37880574 -47557906 - AluSx SINE Alu -21 291 1 1506 203 196 30 chr17 37880574 37880696 -47557784 + MER50 LTR ERV1 634 734 0 1654 167 0 8 chr17 37880696 37880960 -47557520 - AluJb SINE Alu -47 265 4 2049 124 0 10 chr17 37880979 37881277 -47557203 - AluSx SINE Alu -17 295 1 1273 89 0 11 chr17 37881781 37881960 -47556520 - AluSg/x SINE Alu -1 311 135 295 293 85 32 chr17 37882096 37882284 -47556196 - L1MC4a LINE L1 -1882 5926 5729 2144 112 0 3 chr17 37882284 37882579 -47555901 + AluSg SINE Alu 1 294 -16 2173 98 0 7 chr17 37883126 37883423 -47555057 - AluSg SINE Alu -15 295 1 1297 175 26 69 chr17 37883432 37883609 -47554871 - AluJo SINE Alu -21 291 131 2156 112 0 10 chr17 37883609 37883913 -47554567 - AluSx SINE Alu -11 301 1 1297 175 26 69 chr17 37883913 37884038 -47554442 - AluJo SINE Alu -181 131 2 240 35 0 0 chr17 37884097 37884126 -47554354 + (TTG)n Simple_repeat Simple_repeat 2 30 0 809 172 8 8 chr17 37884206 37884340 -47554140 + AluJo SINE Alu 2 135 -177 1896 136 4 0 chr17 37884358 37884638 -47553842 + AluSx SINE Alu 1 281 -31 374 222 95 8 chr17 37884857 37884983 -47553497 - L2 LINE L2 -612 2702 2566 2048 122 0 0 chr17 37885084 37885378 -47553102 - AluSx SINE Alu -18 294 1 227 348 3 26 chr17 37885532 37885665 -47552815 + MIR SINE MIR 60 146 -62 2345 95 0 0 chr17 37885716 37886022 -47552458 - AluSq SINE Alu -7 306 1 748 184 6 58 chr17 37886030 37886102 -47552378 - L1MA10 LINE L1 -1 6333 6259 2173 110 3 0 chr17 37886102 37886401 -47552079 - AluSp SINE Alu -13 300 1 748 184 6 58 chr17 37886401 37886502 -47551978 - L1MA10 LINE L1 -75 6259 6169 612 219 59 35 chr17 37886564 37886733 -47551747 - AluJo SINE Alu -17 295 123 187 153 35 49 chr17 37886967 37887111 -47551369 + C-rich Low_complexity Low_complexity 3 144 0 923 169 97 0 chr17 37887281 37887435 -47551045 - FAM SINE Alu -6 169 1 2202 102 0 3 chr17 37887441 37887745 -47550735 - AluSq SINE Alu -10 303 1 968 182 0 17 chr17 37887844 37888020 -47550460 - AluJb SINE Alu -5 307 135 2260 87 0 3 chr17 37888032 37888361 -47550119 - AluSq SINE Alu 0 313 1 21 0 0 0 chr17 37888371 37888392 -47550088 + AT_rich Low_complexity Low_complexity 1 21 0 1646 173 35 0 chr17 37888668 37888951 -47549529 - AluJo SINE Alu -19 293 1 246 160 0 0 chr17 37889022 37889072 -47549408 + T-rich Low_complexity Low_complexity 1 50 0 2061 121 3 0 chr17 37889089 37889387 -47549093 - AluSx SINE Alu -12 300 2 2151 109 0 0 chr17 37889396 37889689 -47548791 - AluSg SINE Alu -17 293 1 1173 126 25 15 chr17 37889958 37890157 -47548323 - L1MD2 LINE L1 -3 6356 6156 189 0 0 0 chr17 37890161 37890182 -47548298 + (TG)n Simple_repeat Simple_repeat 1 21 0 296 333 36 16 chr17 37890437 37890624 -47547856 - MIR SINE MIR -56 206 12 787 134 0 0 chr17 37891261 37891380 -47547100 + AluSg/x SINE Alu 181 299 -11 323 193 0 143 chr17 37891381 37891436 -47547044 - L1MB8 LINE L1 -43 6135 6104 2237 103 0 0 chr17 37891436 37891736 -47546744 + AluSg SINE Alu 1 300 -10 323 193 0 143 chr17 37891736 37891799 -47546681 - L1MB8 LINE L1 -74 6104 6034 2235 69 7 3 chr17 37891809 37892097 -47546383 + AluSx SINE Alu 1 289 -23 21 0 0 0 chr17 37892097 37892118 -47546362 + AT_rich Low_complexity Low_complexity 1 21 0 1731 152 7 0 chr17 37892130 37892406 -47546074 + AluJb SINE Alu 1 278 -34 189 0 0 0 chr17 37892406 37892427 -47546053 + (TC)n Simple_repeat Simple_repeat 2 22 0 21 0 0 0 chr17 37892427 37892448 -47546032 + AT_rich Low_complexity Low_complexity 1 21 0 810 133 8 0 chr17 37892448 37892568 -47545912 - FLAM_C SINE Alu -21 122 2 2074 127 0 0 chr17 37892737 37893037 -47545443 + AluSg SINE Alu 1 300 -10 316 191 0 32 chr17 37893037 37893100 -47545380 - L1MB8 LINE L1 -84 6094 6034 2129 102 3 7 chr17 37893110 37893405 -47545075 + AluSx SINE Alu 1 294 -18 1127 158 5 0 chr17 37893447 37893631 -47544849 + AluJo SINE Alu 3 187 -125 201 108 0 0 chr17 37893671 37893708 -47544772 + (G)n Simple_repeat Simple_repeat 1 37 0 2234 77 13 0 chr17 37894065 37894365 -47544115 - AluY SINE Alu -7 304 1 1750 129 11 31 chr17 37894373 37894533 -47543947 - AluSx SINE Alu -18 294 132 2152 118 0 3 chr17 37894533 37894838 -47543642 - AluSx SINE Alu -8 304 1 2163 112 0 10 chr17 37894841 37895155 -47543325 - AluSx SINE Alu -1 311 1 1750 129 11 31 chr17 37895155 37895277 -47543203 - AluSx SINE Alu -182 130 14 2167 84 27 0 chr17 37896447 37896744 -47541736 + AluSg SINE Alu 1 305 -5 2142 79 40 0 chr17 37899183 37899461 -47539019 + AluSc SINE Alu 1 289 -20 1025 156 6 12 chr17 37899461 37899620 -47538860 - AluJo/FRAM SINE Alu -6 296 137 1990 122 3 10 chr17 37899791 37900094 -47538386 - AluJb SINE Alu -11 301 1 203 152 65 0 chr17 37900310 37900356 -47538124 + C-rich Low_complexity Low_complexity 4 52 0 244 156 67 0 chr17 37901822 37901867 -47536613 - MIR SINE MIR -151 111 64 1770 168 0 10 chr17 37901867 37902171 -47536309 - AluJo SINE Alu -11 301 1 288 0 0 0 chr17 37902209 37902241 -47536239 + (TG)n Simple_repeat Simple_repeat 2 33 0 778 124 41 16 chr17 37902242 37902363 -47536117 - AluSg/x SINE Alu -19 291 168 183 111 28 0 chr17 37903872 37903908 -47534572 - L2 LINE L2 0 3313 3277 1947 65 91 4 chr17 37904199 37904474 -47534006 - AluSx SINE Alu -13 299 1 2137 104 3 3 chr17 37904476 37904773 -47533707 - AluSx SINE Alu -15 297 1 1614 99 5 0 chr17 37905305 37905526 -47532954 + AluSg/x SINE Alu 88 309 -1 1717 148 7 4 chr17 37905543 37905820 -47532660 + AluJb SINE Alu 14 291 -21 191 156 0 0 chr17 37905827 37905859 -47532621 + L2 LINE L2 3222 3253 -19 556 192 22 71 chr17 37906434 37906616 -47531864 + L2 LINE L2 3141 3313 0 2123 90 3 10 chr17 37906637 37906747 -47531733 + AluSx SINE Alu 26 135 -177 2032 114 3 10 chr17 37906747 37907073 -47531407 + AluSx SINE Alu 1 312 0 2123 90 3 10 chr17 37907073 37907251 -47531229 + AluSx SINE Alu 135 312 0 204 306 14 0 chr17 37907252 37907324 -47531156 + (CACG)n Simple_repeat Simple_repeat 3 75 0 347 314 101 12 chr17 37907824 37907993 -47530487 + MIR SINE MIR 4 187 -75 1221 113 11 0 chr17 37908442 37908619 -47529861 - AluSg/x SINE Alu 0 310 132 2496 46 0 3 chr17 37908619 37908923 -47529557 - AluY SINE Alu -8 303 1 1652 163 10 7 chr17 37908979 37909267 -47529213 + AluJo SINE Alu 1 289 -23 24 20 0 60 chr17 37910502 37910552 -47527928 + AT_rich Low_complexity Low_complexity 1 47 0 2091 100 31 3 chr17 37912868 37913157 -47525323 - AluSx SINE Alu -15 297 1 1819 121 0 15 chr17 37913161 37913433 -47525047 - AluSx SINE Alu -15 297 30 185 0 40 0 chr17 37913906 37913931 -47524549 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 806 191 0 0 chr17 37913937 37914078 -47524402 - FRAM SINE Alu -33 143 3 23 0 0 0 chr17 37914298 37914321 -47524159 + AT_rich Low_complexity Low_complexity 1 23 0 892 176 171 29 chr17 37914351 37914395 -47524085 + AluJo SINE Alu 1 37 -275 1547 167 188 16 chr17 37914395 37914779 -47523701 - LTR7 LTR ERV1 0 450 1 892 176 171 29 chr17 37914779 37914939 -47523541 + AluJo SINE Alu 37 234 -78 1365 154 4 17 chr17 37914939 37915009 -47523471 + AluSg/x SINE Alu 67 136 -176 1868 112 11 0 chr17 37915009 37915269 -47523211 + AluSp SINE Alu 39 301 -12 1365 154 4 17 chr17 37915269 37915431 -47523049 + AluSg/x SINE Alu 136 296 -16 504 32 0 0 chr17 37915437 37915499 -47522981 + (CA)n Simple_repeat Simple_repeat 2 63 0 450 326 148 17 chr17 37915541 37915561 -47522919 - L1ME LINE L1 -373 5748 5732 1911 134 7 3 chr17 37915561 37915853 -47522627 + AluSx SINE Alu 1 293 -19 450 326 148 17 chr17 37915853 37916068 -47522412 - L1ME LINE L1 -389 5732 5482 1057 111 0 0 chr17 37916216 37916369 -47522111 + AluSg/x SINE Alu 153 305 -5 2100 94 7 0 chr17 37916374 37916697 -47521783 + AluSq SINE Alu 1 325 0 2300 90 6 0 chr17 37916697 37917008 -47521472 + AluSp SINE Alu 1 313 0 1786 155 24 3 chr17 37917164 37917460 -47521020 - AluJb SINE Alu 0 312 11 1874 116 25 7 chr17 37917514 37917790 -47520690 - AluSx SINE Alu -26 286 6 2182 91 0 3 chr17 37918519 37918833 -47519647 - AluSq SINE Alu 0 313 1 2239 92 0 0 chr17 37918836 37919129 -47519351 - AluSx SINE Alu -19 293 1 404 188 0 12 chr17 37919150 37919230 -47519250 - MIR SINE MIR -94 168 90 1842 141 28 3 chr17 37919245 37919535 -47518945 - AluSx SINE Alu -15 297 1 1726 171 10 7 chr17 37919557 37919867 -47518613 - AluJb SINE Alu -1 311 1 21 0 0 0 chr17 37919879 37919900 -47518580 + AT_rich Low_complexity Low_complexity 1 21 0 2102 101 0 0 chr17 37919900 37920187 -47518293 - AluSg SINE Alu -23 287 1 1962 136 7 0 chr17 37920676 37920986 -47517494 + AluJo SINE Alu 1 312 0 2300 84 0 3 chr17 37921258 37921556 -47516924 + AluSq SINE Alu 1 297 -16 1096 117 0 6 chr17 37921556 37921719 -47516761 + AluSg/x SINE Alu 134 295 -17 987 176 151 29 chr17 37921719 37921991 -47516489 + AluSx SINE Alu 6 310 -2 234 250 0 17 chr17 37922000 37922060 -47516420 - MIR SINE MIR -172 90 32 242 340 73 40 chr17 37922962 37923112 -47515368 + MIR SINE MIR 105 259 -3 24 0 0 0 chr17 37923689 37923713 -47514767 + GC_rich Low_complexity Low_complexity 1 24 0 1891 131 34 3 chr17 37924825 37925123 -47513357 + AluSx SINE Alu 1 307 -5 1237 182 68 44 chr17 37925132 37925279 -47513201 + AluSq SINE Alu 1 143 -160 1493 88 4 40 chr17 37925279 37925506 -47512974 + AluSq SINE Alu 1 219 -94 1237 182 68 44 chr17 37925506 37925654 -47512826 + AluSq SINE Alu 143 303 0 1335 150 72 101 chr17 37925659 37925804 -47512676 + AluJo SINE Alu 2 150 -196 227 27 0 54 chr17 37925804 37925841 -47512639 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 1335 150 72 101 chr17 37925841 37926049 -47512431 + AluJo SINE Alu 150 346 0 638 192 56 0 chr17 37926060 37926185 -47512295 + FLAM_C SINE Alu 1 132 -1 1281 177 22 0 chr17 37926195 37926421 -47512059 + AluJo SINE Alu 1 231 -81 1520 138 142 4 chr17 37926425 37926604 -47511876 + AluJb SINE Alu 5 233 -69 2052 94 24 10 chr17 37926604 37926902 -47511578 + AluSc SINE Alu 1 302 -7 1520 138 142 4 chr17 37926902 37926983 -47511497 + AluJb SINE Alu 233 301 -1 470 245 94 13 chr17 37926995 37927154 -47511326 + L1MC/D LINE L1 5508 5679 -2129 407 248 0 20 chr17 37927155 37927256 -47511224 + L2 LINE L2 3212 3310 -3 863 134 8 8 chr17 37927557 37927691 -47510789 + AluSq/x SINE Alu 1 134 -179 939 138 0 69 chr17 37927946 37928073 -47510407 - AluSq SINE Alu -53 260 149 2231 80 0 3 chr17 37928073 37928359 -47510121 - AluSq SINE Alu -18 295 11 939 138 0 69 chr17 37928359 37928420 -47510060 - AluSq SINE Alu -164 149 85 286 167 0 24 chr17 37928420 37928481 -47509999 - AluSc SINE Alu -51 248 204 1528 186 0 61 chr17 37928877 37929205 -47509275 + AluJo SINE Alu 5 312 0 437 263 68 0 chr17 37929230 37929363 -47509117 + MIR SINE MIR 4 145 -117 2108 98 3 7 chr17 37929369 37929665 -47508815 + AluSp SINE Alu 3 297 -16 804 103 0 0 chr17 37929689 37929796 -47508684 + AluSc SINE Alu 176 318 0 292 28 0 0 chr17 37929796 37929832 -47508648 + (CAA)n Simple_repeat Simple_repeat 2 180 0 1927 128 0 3 chr17 37929901 37930183 -47508297 + AluSx SINE Alu 6 286 -26 2287 74 6 10 chr17 37930543 37930855 -47507625 + AluSq SINE Alu 1 311 -2 1559 134 9 0 chr17 37930986 37931217 -47507263 - AluSx SINE Alu -74 238 6 1298 159 18 62 chr17 37931305 37931489 -47506991 - AluJb SINE Alu -14 298 128 2187 97 17 0 chr17 37931489 37931787 -47506693 - AluSx SINE Alu -9 303 1 1298 159 18 62 chr17 37931787 37931878 -47506602 - AluJb SINE Alu -184 128 35 2363 92 0 0 chr17 37932834 37933138 -47505342 + AluSg SINE Alu 1 304 -6 2070 92 0 14 chr17 37933555 37933877 -47504603 + AluSg SINE Alu 1 310 0 302 273 31 75 chr17 37935166 37935327 -47503153 + MIR SINE MIR 28 181 -81 606 160 0 0 chr17 37935332 37935426 -47503054 - FRAM SINE Alu -10 166 73 1471 79 117 0 chr17 37936332 37936546 -47501934 + AluSg/x SINE Alu 72 310 -2 243 273 250 23 chr17 37936600 37936728 -47501752 - MIR SINE MIR -92 170 14 212 228 0 63 chr17 37939221 37939300 -47499180 + (CCGGG)n Simple_repeat Simple_repeat 3 76 0 419 274 134 6 chr17 37939940 37940104 -47498376 + MIR SINE MIR 32 216 -46 200 291 36 35 chr17 37940145 37940265 -47498215 - MIR SINE MIR -61 147 74 2185 108 0 9 chr17 37940509 37940824 -47497656 + AluSx SINE Alu 1 312 0 2197 102 0 0 chr17 37940889 37941184 -47497296 + AluSx SINE Alu 1 295 -17 212 333 17 42 chr17 37941287 37941407 -47497073 - L2 LINE L2 0 3313 3197 671 157 0 10 chr17 37942037 37942139 -47496341 - AluJ/FLAM SINE Alu -210 102 2 288 0 0 0 chr17 37942178 37942210 -47496270 + (TG)n Simple_repeat Simple_repeat 2 33 0 1946 111 50 0 chr17 37942211 37942490 -47495990 - AluSx SINE Alu -19 293 1 2183 88 3 7 chr17 37942985 37943282 -47495198 + AluSx SINE Alu 1 296 -16 1951 123 3 20 chr17 37943717 37944018 -47494462 - AluSx SINE Alu -16 296 1 1367 157 134 76 chr17 37944479 37944533 -47493947 - MSTD LTR MaLR -2 394 345 1755 172 3 3 chr17 37944533 37944830 -47493650 - AluJb SINE Alu -15 297 1 1367 157 134 76 chr17 37944830 37945118 -47493362 - MSTD LTR MaLR -51 345 32 2249 107 0 3 chr17 37945259 37945567 -47492913 - AluSx SINE Alu -5 307 1 2271 94 3 3 chr17 37946066 37946375 -47492105 - AluSc SINE Alu 0 309 1 1369 222 100 14 chr17 37946971 37947332 -47491148 + L1ME3 LINE L1 5635 6026 -136 339 212 0 0 chr17 37947341 37947407 -47491073 + L1ME3 LINE L1 6067 6132 -30 306 153 0 0 chr17 37947436 37947495 -47490985 - Alu SINE Alu -1 300 242 1825 150 0 20 chr17 37947495 37947795 -47490685 + AluJb SINE Alu 6 299 -13 2139 115 3 0 chr17 37948178 37948483 -47489997 + AluSx SINE Alu 1 306 -6 920 229 44 10 chr17 37948852 37949057 -47489423 - MER58A DNA MER1_type -1 223 12 2038 95 25 0 chr17 37949467 37949790 -47488690 - AluY SINE Alu 0 311 1 1877 142 3 0 chr17 37949790 37950078 -47488402 - AluSx SINE Alu -4 308 19 1778 108 54 48 chr17 37950231 37950405 -47488075 - AluSx SINE Alu -15 297 119 2272 85 0 25 chr17 37950405 37950721 -47487759 - AluY SINE Alu -3 308 1 1778 108 54 48 chr17 37950721 37950841 -47487639 - AluSx SINE Alu -193 119 1 1434 244 158 55 chr17 37950856 37951325 -47487155 + L2 LINE L2 2120 2539 -774 1990 115 10 26 chr17 37951325 37951637 -47486843 - AluSx SINE Alu -5 307 1 1434 244 158 55 chr17 37951637 37952250 -47486230 + L2 LINE L2 2539 3309 -4 301 285 277 22 chr17 37952308 37952650 -47485830 + L2 LINE L2 2623 3048 -265 270 95 0 0 chr17 37953469 37953511 -47484969 + (CCG)n Simple_repeat Simple_repeat 2 43 0 2196 92 6 22 chr17 37953975 37954320 -47484160 - AluY SINE Alu 0 340 1 555 225 236 0 chr17 37954576 37954754 -47483726 + MIR SINE MIR 15 234 -28 1504 153 10 48 chr17 37954874 37955168 -47483312 + AluSq SINE Alu 2 284 -29 2164 89 0 7 chr17 37955941 37956244 -47482236 + AluSg SINE Alu 1 301 -9 2066 84 3 55 chr17 37956252 37956562 -47481918 + AluSc SINE Alu 1 294 -15 1486 154 117 8 chr17 37956576 37956842 -47481638 + AluSg1 SINE Alu 1 295 -14 1702 147 27 3 chr17 37956844 37957136 -47481344 + AluSx SINE Alu 1 299 -13 2288 78 0 0 chr17 37957522 37957816 -47480664 - AluY SINE Alu -17 294 1 524 220 0 0 chr17 37961157 37961266 -47477214 + FLAM_C SINE Alu 34 142 -1 2157 102 7 0 chr17 37961333 37961627 -47476853 + AluSg SINE Alu 1 296 -14 619 152 19 0 chr17 37961638 37961743 -47476737 + FLAM_C SINE Alu 2 108 -35 2098 98 0 7 chr17 37962605 37962882 -47475598 + AluSx SINE Alu 2 276 -36 2061 115 3 13 chr17 37962948 37963253 -47475227 + AluSx SINE Alu 1 302 -10 2219 85 0 13 chr17 37963264 37963570 -47474910 + AluY SINE Alu 1 302 -9 2076 118 7 0 chr17 37963589 37963885 -47474595 - AluSx SINE Alu -14 298 1 389 303 30 23 chr17 37963889 37964021 -47474459 - MIR SINE MIR -70 192 60 2037 107 0 0 chr17 37964199 37964517 -47473963 + AluSg SINE Alu 1 318 0 474 276 126 11 chr17 37965243 37965417 -47473063 + MER117 DNA MER1_type 1 194 -3 263 329 105 20 chr17 37965571 37965722 -47472758 - MIR3 SINE MIR -65 143 3 2327 83 0 3 chr17 37965746 37966058 -47472422 - AluY SINE Alu 0 311 1 190 254 284 0 chr17 37966402 37966469 -47472011 - MIR SINE MIR 0 262 177 870 218 6 0 chr17 37966471 37966641 -47471839 - AluJb SINE Alu -8 304 134 2014 136 0 3 chr17 37966641 37966949 -47471531 - AluJb SINE Alu -5 307 1 447 233 0 4 chr17 37966958 37967064 -47471416 - MIR SINE MIR -62 146 55 283 331 111 25 chr17 37967228 37967400 -47471080 + MIR SINE MIR 38 233 -29 2083 97 31 0 chr17 37967400 37967689 -47470791 + AluSq SINE Alu 1 298 -15 283 331 111 25 chr17 37967689 37967718 -47470762 + MIR SINE MIR 233 258 -4 2396 76 0 0 chr17 37968428 37968732 -47469748 - AluSg SINE Alu -6 304 1 220 260 13 26 chr17 37968812 37968889 -47469591 + L2 LINE L2 2892 2967 -305 31 0 0 0 chr17 37970236 37970267 -47468213 + GC_rich Low_complexity Low_complexity 1 31 0 22 35 0 0 chr17 37971387 37971416 -47467064 + GC_rich Low_complexity Low_complexity 1 29 0 418 276 121 50 chr17 37972509 37972708 -47465772 + MIR SINE MIR 16 228 -34 1046 110 39 0 chr17 37973006 37973160 -47465320 - AluSg/x SINE Alu -19 291 132 1526 112 4 33 chr17 37973160 37973402 -47465078 - AluSg/x SINE Alu 0 312 78 1053 168 5 15 chr17 37973518 37973715 -47464765 - AluSx SINE Alu -113 199 5 2112 70 35 0 chr17 37973731 37974015 -47464465 - AluY SINE Alu -17 294 1 1064 84 7 0 chr17 37974597 37974763 -47463717 - AluSq SINE Alu 0 308 142 575 164 10 0 chr17 37974764 37974868 -47463612 + AluSg/x SINE Alu 206 310 0 1300 153 0 62 chr17 37974883 37975125 -47463355 + AluJo SINE Alu 1 227 -85 430 335 25 15 chr17 37975405 37975605 -47462875 - AluJb SINE Alu -103 209 8 1668 75 0 0 chr17 37975627 37975839 -47462641 - AluY SINE Alu -18 293 82 344 291 109 23 chr17 37975929 37976104 -47462376 + MIR SINE MIR 53 242 -20 260 196 0 0 chr17 37976658 37976709 -47461771 - MIR SINE MIR -74 134 84 1885 141 24 3 chr17 37976739 37977037 -47461443 + AluJo SINE Alu 1 304 -8 279 218 0 0 chr17 37977037 37977092 -47461388 + MER91 DNA MER1_type 142 196 0 565 184 9 18 chr17 37977508 37977622 -47460858 - AluJb SINE Alu -17 295 183 1096 180 19 14 chr17 37977666 37977739 -47460741 - AluSx SINE Alu -100 212 141 2257 86 3 3 chr17 37977739 37978040 -47460440 - AluSx SINE Alu -11 301 1 1096 180 19 14 chr17 37978040 37978177 -47460303 - AluSx SINE Alu -171 141 1 189 0 0 0 chr17 37978177 37978198 -47460282 + (T)n Simple_repeat Simple_repeat 1 21 0 995 182 56 5 chr17 37978257 37978455 -47460025 + AluJb SINE Alu 90 297 -15 754 186 0 0 chr17 37978455 37978573 -47459907 - AluJo/FLAM SINE Alu -193 119 2 1437 197 33 7 chr17 37978585 37978889 -47459591 - AluJo SINE Alu 0 312 1 1867 118 79 13 chr17 37978904 37979209 -47459271 - MER1B DNA MER1_type 0 339 15 611 214 77 73 chr17 37979401 37979472 -47459008 + L2 LINE L2 2831 2900 -372 1560 149 68 37 chr17 37979472 37979768 -47458712 - AluJo SINE Alu -7 305 1 611 214 77 73 chr17 37979768 37979944 -47458536 + L2 LINE L2 2900 3079 -193 607 191 129 45 chr17 37980029 37980070 -47458410 - MER3 DNA MER1_type -16 193 157 2300 100 3 3 chr17 37980070 37980380 -47458100 + AluSx SINE Alu 1 310 -2 607 191 129 45 chr17 37980380 37980434 -47458046 - MER3 DNA MER1_type -52 157 109 2130 77 35 7 chr17 37980434 37980720 -47457760 + AluSc SINE Alu 1 294 -15 607 191 129 45 chr17 37980720 37980801 -47457679 - MER3 DNA MER1_type -100 109 1 1226 187 76 4 chr17 37981877 37982174 -47456306 + AluSx SINE Alu 1 316 0 325 339 56 78 chr17 37983397 37983754 -47454726 - L2 LINE L2 -4 3268 2920 207 335 145 11 chr17 37983755 37983934 -47454546 - MIR SINE MIR 0 262 60 226 288 98 30 chr17 37984162 37984294 -47454186 - MIR SINE MIR -68 194 54 1831 114 40 0 chr17 37984376 37984649 -47453831 - AluSc SINE Alu -25 284 1 1659 129 13 55 chr17 37984730 37984871 -47453609 + AluSx SINE Alu 1 146 -166 2260 105 3 0 chr17 37984871 37985175 -47453305 + AluSq SINE Alu 1 305 -8 1659 129 13 55 chr17 37985175 37985342 -47453138 + AluSx SINE Alu 146 296 -16 323 185 8 46 chr17 37985373 37985503 -47452977 + GA-rich Low_complexity Low_complexity 2 126 0 1812 122 87 3 chr17 37985662 37985949 -47452531 + AluSx SINE Alu 2 312 0 2263 84 3 0 chr17 37985949 37986292 -47452188 + AluY SINE Alu 1 311 0 233 293 162 0 chr17 37986478 37986577 -47451903 - MIR SINE MIR -39 223 109 1556 149 40 53 chr17 37986931 37987097 -47451383 + MER47A DNA MER2_type 1 163 -2160 2244 89 0 3 chr17 37987097 37987399 -47451081 - AluSq SINE Alu -12 301 1 1556 149 40 53 chr17 37987399 37987553 -47450927 + MER47A DNA MER2_type 163 317 -49 883 221 67 0 chr17 37987589 37987784 -47450696 - AluJb SINE Alu -11 301 94 280 158 35 18 chr17 37987785 37987842 -47450638 + MER47A DNA MER2_type 309 366 0 2349 87 3 0 chr17 37987860 37988172 -47450308 - AluSp SINE Alu 0 313 1 388 209 19 29 chr17 37989345 37989450 -47449030 + MIR SINE MIR 30 133 -75 1001 276 99 84 chr17 37990320 37990407 -47448073 - MER115 DNA AcHobo -4 689 605 2286 94 0 10 chr17 37990407 37990714 -47447766 + AluSx SINE Alu 1 304 -8 1001 276 99 84 chr17 37990714 37991262 -47447218 - MER115 DNA AcHobo -88 605 41 2076 97 16 23 chr17 37991262 37991571 -47446909 + AluY SINE Alu 1 307 -4 1680 170 20 13 chr17 37991613 37991919 -47446561 + AluJb SINE Alu 1 308 -4 327 104 0 0 chr17 37992191 37992239 -47446241 + (TG)n Simple_repeat Simple_repeat 2 49 0 198 0 0 0 chr17 37992315 37992337 -47446143 + (TG)n Simple_repeat Simple_repeat 1 22 0 2321 88 0 3 chr17 37992403 37992711 -47445769 - AluSp SINE Alu -6 307 1 232 305 291 10 chr17 37993029 37993232 -47445248 + L3b LINE CR1 1298 1557 -26 324 0 0 0 chr17 37993580 37993616 -47444864 + (CA)n Simple_repeat Simple_repeat 2 37 0 249 242 76 0 chr17 37994202 37994268 -47444212 + MIR SINE MIR 158 228 -34 263 258 156 48 chr17 37994463 37994630 -47443850 + L2 LINE L2 1330 1514 -1800 1505 156 103 128 chr17 37994637 37995200 -47443280 + LTR49 LTR ERV1 1 660 -47 2051 91 42 3 chr17 37995200 37995486 -47442994 + AluSg SINE Alu 1 297 -13 219 146 0 0 chr17 37995621 37995662 -47442818 + (A)n Simple_repeat Simple_repeat 1 41 0 380 234 37 9 chr17 37995918 37996025 -47442455 + L1ME4a LINE L1 6011 6120 -1 299 259 86 12 chr17 37996289 37996370 -47442110 + L2 LINE L2 3178 3264 -8 224 303 118 20 chr17 37996807 37996959 -47441521 - MIR SINE MIR -67 195 29 286 257 14 0 chr17 37997789 37997859 -47440621 + MLT1I LTR MaLR 72 142 -267 2022 108 0 4 chr17 37997970 37998247 -47440233 + AluSq SINE Alu 23 298 -15 10643 31 4 93 chr17 37998288 37999807 -47438673 + SVA Other Other 3 1386 0 2328 74 0 7 chr17 38000027 38000324 -47438156 - AluSq SINE Alu -18 295 1 759 160 0 23 chr17 38000325 38000456 -47438024 - FRAM SINE Alu -8 168 41 2989 81 24 7 chr17 38000459 38000879 -47437601 + MLT2A1 LTR ERVL 18 444 0 707 268 16 16 chr17 38001873 38002063 -47436417 - MIR SINE MIR -44 218 29 1686 87 0 0 chr17 38002068 38002287 -47436193 - AluSq SINE Alu -94 219 1 869 204 0 19 chr17 38002295 38002452 -47436028 - AluJb SINE Alu -10 302 149 2162 129 3 0 chr17 38002592 38002902 -47435578 - AluSx SINE Alu -1 311 1 1836 144 3 3 chr17 38002905 38003213 -47435267 - AluJb SINE Alu 0 308 1 512 286 58 13 chr17 38005573 38005759 -47432721 - MIR SINE MIR -11 197 2 495 266 22 67 chr17 38005869 38006039 -47432441 - MIR3 SINE MIR -9 199 36 2012 129 0 3 chr17 38006039 38006333 -47432147 - AluSx SINE Alu -19 293 1 495 266 22 67 chr17 38006333 38006361 -47432119 - MIR3 SINE MIR -172 36 8 411 301 118 30 chr17 38008361 38008564 -47429916 + MIR SINE MIR 15 235 -27 453 216 137 0 chr17 38009158 38009297 -47429183 + MIR SINE MIR 47 204 -58 699 304 38 15 chr17 38009315 38009581 -47428899 + L2 LINE L2 2212 2483 -831 428 121 30 0 chr17 38009712 38009778 -47428702 - AluSg/x SINE Alu -41 268 201 * 557 87 0 0 chr17 38009776 38009845 -47428635 + Alu SINE Alu 222 290 -19 1624 192 4 0 chr17 38009853 38010164 -47428316 + AluJb SINE Alu 1 312 0 1608 151 34 4 chr17 38010195 38010460 -47428020 - AluJb SINE Alu -5 307 35 363 310 173 15 chr17 38011793 38011990 -47426490 - MIR SINE MIR -15 247 20 2008 116 27 0 chr17 38012102 38012395 -47426085 + AluSx SINE Alu 1 301 -11 2336 100 0 0 chr17 38014953 38015263 -47423217 + AluSx SINE Alu 1 310 -2 428 265 191 0 chr17 38017343 38017398 -47421082 - MER91A DNA MER1_type 0 196 153 2292 34 45 7 chr17 38017398 38017690 -47420790 - AluY SINE Alu -8 303 1 428 265 191 0 chr17 38017690 38017796 -47420684 - MER91A DNA MER1_type -43 153 4 1289 142 5 5 chr17 38018447 38018651 -47419829 + AluJo SINE Alu 1 204 -108 316 277 138 51 chr17 38018806 38019059 -47419421 + L2 LINE L2 2903 3177 -95 2046 137 0 9 chr17 38019660 38019975 -47418505 - AluSx SINE Alu 0 312 1 21 36 0 0 chr17 38020243 38020271 -47418209 + AT_rich Low_complexity Low_complexity 1 28 0 1488 92 0 10 chr17 38020690 38020896 -47417584 + AluSq SINE Alu 1 204 -109 201 184 20 0 chr17 38020910 38020959 -47417521 + A-rich Low_complexity Low_complexity 1 50 0 1438 186 13 46 chr17 38020961 38021267 -47417213 - AluJb SINE Alu -16 296 1 191 276 32 89 chr17 38021542 38021665 -47416815 - MIR SINE MIR 0 262 147 523 326 19 56 chr17 38021668 38021935 -47416545 - MIR SINE MIR -4 258 2 263 182 0 0 chr17 38022647 38022691 -47415789 + Alu SINE Alu 1 44 -259 850 167 39 19 chr17 38022757 38022913 -47415567 + FAM SINE Alu 1 44 -5 2176 128 0 0 chr17 38022929 38023241 -47415239 + AluSx SINE Alu 1 312 0 2030 131 3 0 chr17 38023244 38023542 -47414938 + AluSx SINE Alu 1 299 -13 2142 95 0 0 chr17 38023933 38024250 -47414230 + AluSx SINE Alu 1 317 0 570 170 0 29 chr17 38024692 38024919 -47413561 + AluJo SINE Alu 2 297 -15 2007 147 3 0 chr17 38024924 38025236 -47413244 + AluSp SINE Alu 1 313 0 226 264 19 0 chr17 38025251 38025304 -47413176 - MER58 DNA MER1_type -161 54 1 1538 146 11 21 chr17 38025324 38025605 -47412875 + AluJo SINE Alu 1 278 -34 2222 92 0 13 chr17 38026416 38026721 -47411759 + AluSq SINE Alu 1 301 -12 2031 122 3 14 chr17 38027268 38027563 -47410917 + AluSx SINE Alu 1 292 -20 2337 82 0 7 chr17 38028242 38028545 -47409935 + AluSp SINE Alu 1 301 -12 454 230 35 9 chr17 38028856 38028969 -47409511 - MLT1I LTR MaLR -23 386 271 21 36 0 0 chr17 38029287 38029315 -47409165 + AT_rich Low_complexity Low_complexity 1 28 0 256 213 0 0 chr17 38029319 38029366 -47409114 + MER57A LTR ERV1 291 337 -66 30 0 1 15 chr17 38029367 38029386 -47409094 + AT_rich Low_complexity Low_complexity 1 13 -17 2300 57 7 17 chr17 38029386 38029683 -47408797 + AluSq SINE Alu 2 295 -18 30 0 1 15 chr17 38029683 38029701 -47408779 + AT_rich Low_complexity Low_complexity 13 30 0 1411 166 133 19 chr17 38029701 38029972 -47408508 + AluJb SINE Alu 1 302 0 1289 189 23 23 chr17 38030008 38030273 -47408207 - AluJo SINE Alu -9 303 39 230 56 28 0 chr17 38030373 38030409 -47408071 + (TTTA)n Simple_repeat Simple_repeat 1 37 0 1200 176 118 39 chr17 38030409 38030664 -47407816 - AluJo SINE Alu -36 276 2 180 77 0 0 chr17 38030667 38030693 -47407787 + (TTTTA)n Simple_repeat Simple_repeat 2 27 0 1582 174 0 24 chr17 38030697 38030985 -47407495 - AluJo SINE Alu -31 281 1 1934 144 0 7 chr17 38031662 38031961 -47406519 - AluJo SINE Alu -15 297 1 2107 112 0 10 chr17 38032914 38033218 -47405262 + AluSx SINE Alu 1 301 -11 967 155 19 0 chr17 38033221 38033382 -47405098 + AluSg/x SINE Alu 140 303 -7 733 202 8 0 chr17 38033427 38033556 -47404924 + FLAM_A SINE Alu 4 133 0 477 77 192 0 chr17 38033564 38033642 -47404838 + L1MA2 LINE L1 6208 6300 -4 278 290 80 30 chr17 38034053 38034153 -47404327 - MIR3 SINE MIR -47 161 57 307 267 22 0 chr17 38036962 38037052 -47401428 - MIR SINE MIR -86 176 85 2061 102 0 3 chr17 38037088 38037395 -47401085 - AluSx SINE Alu 0 306 1 2117 91 3 13 chr17 38037975 38038273 -47400207 + AluSx SINE Alu 1 295 -17 302 313 76 9 chr17 38038334 38038558 -47399922 + L2 LINE L2 2818 3056 -257 1696 136 6 87 chr17 38038757 38039080 -47399400 + AluJo SINE Alu 14 310 -2 2215 78 0 10 chr17 38039082 38039376 -47399104 + AluY SINE Alu 21 311 0 209 231 67 106 chr17 38039393 38039421 -47399059 + L2 LINE L2 2700 2728 -586 1484 204 3 19 chr17 38039421 38039730 -47398750 + AluJo SINE Alu 1 304 -8 209 231 67 106 chr17 38039730 38039805 -47398675 + L2 LINE L2 2728 2799 -515 434 276 162 55 chr17 38039863 38039929 -47398551 + L2 LINE L2 2966 3024 -289 1929 116 43 20 chr17 38039929 38040231 -47398249 - AluJb SINE Alu -3 309 1 434 276 162 55 chr17 38040231 38040472 -47398008 + L2 LINE L2 3024 3306 -7 1998 140 0 0 chr17 38041204 38041496 -47396984 - AluSx SINE Alu -19 293 2 1351 167 163 8 chr17 38041815 38042072 -47396408 - AluJb SINE Alu -5 297 1 2400 73 0 6 chr17 38042456 38042769 -47395711 + AluY SINE Alu 1 311 0 1894 134 11 0 chr17 38042821 38043098 -47395382 + AluSq SINE Alu 1 280 -33 219 172 111 0 chr17 38043106 38043205 -47395275 + GA-rich Low_complexity Low_complexity 3 112 0 795 80 21 64 chr17 38043206 38043393 -47395087 + (GGGAA)n Simple_repeat Simple_repeat 2 180 0 2120 107 3 3 chr17 38047465 38047763 -47390717 + AluSx SINE Alu 1 298 -14 1301 206 10 14 chr17 38050521 38050813 -47387667 + AluJb SINE Alu 5 295 -17 2147 107 10 0 chr17 38050816 38051115 -47387365 + AluSx SINE Alu 1 302 -10 290 229 16 0 chr17 38051737 38051798 -47386682 + L2 LINE L2 3252 3313 0 406 311 26 7 chr17 38051891 38052042 -47386438 - L3 LINE CR1 -1 1576 1423 212 341 37 0 chr17 38052080 38052162 -47386318 - L3 LINE CR1 -244 1333 1249 487 285 140 20 chr17 38052296 38052496 -47385984 - MIR SINE MIR -14 248 25 2423 93 0 0 chr17 38103975 38104287 -47334193 + AluSx SINE Alu 1 312 0 577 246 0 14 chr17 38106260 38106398 -47332082 + MIR3 SINE MIR 3 138 -70 270 236 19 19 chr17 38106956 38107062 -47331418 - Charlie8 DNA MER1_type -2271 146 41 711 126 0 42 chr17 38107122 38107241 -47331239 + FLAM_C SINE Alu 28 141 -2 2072 125 10 0 chr17 38107245 38107541 -47330939 + AluSx SINE Alu 1 299 -13 237 258 52 52 chr17 38107634 38107731 -47330749 + L2 LINE L2 3176 3272 0 379 320 93 0 chr17 38108834 38108984 -47329496 - MIR3 SINE MIR -15 193 30 1757 128 50 30 chr17 38109039 38109337 -47329143 + AluJb SINE Alu 1 304 -8 2363 91 3 0 chr17 38109338 38109647 -47328833 + AluSp SINE Alu 1 310 -3 2495 53 0 0 chr17 38109922 38110221 -47328259 - AluY SINE Alu -12 299 1 1164 37 0 0 chr17 38110221 38110355 -47328125 - AluY SINE Alu -177 134 1 356 365 98 0 chr17 38110412 38110626 -47327854 - MIR SINE MIR -5 257 23 344 352 94 27 chr17 38110645 38111310 -47327170 + L2 LINE L2 2555 3272 0 1887 152 0 23 chr17 38111315 38111625 -47326855 + AluJo SINE Alu 1 303 -9 582 168 0 0 chr17 38111647 38111742 -47326738 + FLAM_C SINE Alu 40 134 -9 2057 103 7 36 chr17 38111858 38112034 -47326446 - AluSx SINE Alu -1 311 146 2419 67 0 3 chr17 38112034 38112333 -47326147 - AluY SINE Alu -13 298 1 2057 103 7 36 chr17 38112333 38112457 -47326023 - AluSx SINE Alu -166 146 20 533 318 244 23 chr17 38112617 38112661 -47325819 + L2 LINE L2 1911 1944 -1370 2321 78 0 3 chr17 38112661 38112954 -47325526 - AluSg SINE Alu -18 292 1 533 318 244 23 chr17 38112954 38113257 -47325223 + L2 LINE L2 1944 2179 -1135 1882 138 6 32 chr17 38113257 38113569 -47324911 + AluJo SINE Alu 1 304 -8 533 318 244 23 chr17 38113569 38113871 -47324609 + L2 LINE L2 2179 2705 -609 556 78 0 0 chr17 38113883 38113960 -47324520 + Alu SINE Alu 221 297 -12 289 336 45 54 chr17 38114045 38114488 -47323992 + L2 LINE L2 2832 3270 -2 979 117 102 51 chr17 38114783 38114980 -47323500 - MER3 DNA MER1_type -2 207 1 21 95 0 0 chr17 38115477 38115540 -47322940 + GC_rich Low_complexity Low_complexity 1 63 0 25 114 0 0 chr17 38115684 38115807 -47322673 + GC_rich Low_complexity Low_complexity 1 123 0 312 241 111 9 chr17 38116430 38116538 -47321942 + MIR SINE MIR 34 152 -110 218 273 64 55 chr17 38119393 38119503 -47318977 - MIR SINE MIR -69 139 29 2230 116 0 0 chr17 38119578 38119881 -47318599 - AluSx SINE Alu -9 303 1 1599 156 3 60 chr17 38121479 38121591 -47316889 + AluJo SINE Alu 1 118 -187 2269 137 39 20 chr17 38121591 38121948 -47316532 + THE1B LTR MaLR 1 364 0 1599 156 3 60 chr17 38121948 38122157 -47316323 + AluJo SINE Alu 118 305 0 367 283 121 22 chr17 38122157 38122338 -47316142 + MIR SINE MIR 37 231 -31 456 19 0 0 chr17 38122493 38122546 -47315934 + (TG)n Simple_repeat Simple_repeat 1 53 0 2206 109 7 0 chr17 38122668 38122971 -47315509 + AluSx SINE Alu 1 305 -7 2139 113 13 3 chr17 38123661 38123962 -47314518 - AluSx SINE Alu -8 304 1 219 281 9 95 chr17 38124155 38124365 -47314115 + L2 LINE L2 3035 3226 -46 2084 115 0 7 chr17 38124614 38124931 -47313549 - AluSx SINE Alu 0 312 1 1857 140 7 3 chr17 38125719 38126011 -47312469 - AluSx SINE Alu -6 306 14 228 174 0 0 chr17 38126168 38126214 -47312266 + L2 LINE L2 3268 3313 0 2347 115 0 0 chr17 38126217 38126529 -47311951 - AluSx SINE Alu 0 312 1 193 209 23 70 chr17 38126674 38126760 -47311720 + L2 LINE L2 2931 3012 -260 2144 108 3 7 chr17 38128263 38128568 -47309912 + AluSq SINE Alu 9 312 -1 561 30 0 0 chr17 38129071 38129138 -47309342 + (CA)n Simple_repeat Simple_repeat 1 67 0 1804 130 77 63 chr17 38129429 38129582 -47308898 + MLT1B LTR MaLR 1 150 -240 2009 120 0 17 chr17 38129582 38129881 -47308599 - AluSx SINE Alu -16 296 3 1950 129 0 14 chr17 38129884 38130164 -47308316 - AluSx SINE Alu -30 282 7 1804 130 77 63 chr17 38130164 38130384 -47308096 + MLT1B LTR MaLR 151 383 -7 790 181 8 0 chr17 38130713 38130846 -47307634 - AluJo SINE Alu -178 134 1 518 217 101 79 chr17 38130846 38131035 -47307445 + MIR SINE MIR 20 212 -50 2156 97 0 7 chr17 38131059 38131377 -47307103 - AluSc SINE Alu 0 309 1 1473 189 108 65 chr17 38131620 38131805 -47306675 + MLT1C LTR MaLR 1 177 -290 2183 118 0 7 chr17 38131805 38132111 -47306369 + AluSg SINE Alu 1 304 -6 1473 189 108 65 chr17 38132111 38132369 -47306111 + MLT1C LTR MaLR 177 463 -4 270 388 25 12 chr17 38133301 38133461 -47305019 - MIR3 SINE MIR -38 170 9 342 298 60 48 chr17 38133474 38133530 -47304950 - MIR SINE MIR 0 262 208 595 201 0 79 chr17 38133530 38133669 -47304811 - FLAM_A SINE Alu -2 131 4 342 298 60 48 chr17 38133669 38133780 -47304700 - MIR SINE MIR -54 208 93 180 0 0 0 chr17 38134061 38134081 -47304399 + (TCTG)n Simple_repeat Simple_repeat 1 20 0 218 269 31 92 chr17 38134691 38134779 -47303701 + MIR3 SINE MIR 60 152 -56 2135 116 13 0 chr17 38134779 38135080 -47303400 + AluSq SINE Alu 1 305 -8 2448 49 3 3 chr17 38135081 38135386 -47303094 + AluY SINE Alu 1 305 -6 218 269 31 92 chr17 38135386 38135425 -47303055 + MIR3 SINE MIR 151 181 -27 184 313 45 15 chr17 38136546 38136613 -47301867 - L3b LINE CR1 -225 1358 1290 22 0 0 0 chr17 38137734 38137756 -47300724 + GC_rich Low_complexity Low_complexity 1 22 0 251 264 39 140 chr17 38138093 38138178 -47300302 - MIR SINE MIR -72 190 131 2104 105 11 0 chr17 38138178 38138464 -47300016 + AluSq SINE Alu 6 294 -19 251 264 39 140 chr17 38138464 38138556 -47299924 - MIR SINE MIR -131 131 31 519 301 121 20 chr17 38138963 38139309 -47299171 + L2 LINE L2 2890 3270 -2 401 96 14 41 chr17 38139340 38139413 -47299067 + L1MB8 LINE L1 6107 6177 -1 2277 78 3 3 chr17 38139413 38139707 -47298773 - AluSc SINE Alu -15 294 1 839 302 167 3 chr17 38139854 38140208 -47298272 - L3 LINE CR1 -3 1574 1163 2443 63 0 0 chr17 38140511 38140811 -47297669 - AluY SINE Alu -10 301 2 222 302 107 13 chr17 38140874 38141023 -47297457 - L3 LINE CR1 -550 1027 865 609 263 58 54 chr17 38141228 38141358 -47297122 - MIR SINE MIR -7 255 122 2457 65 0 3 chr17 38141358 38141667 -47296813 + AluY SINE Alu 1 308 -3 609 263 58 54 chr17 38141667 38141760 -47296720 - MIR SINE MIR -140 122 31 283 271 21 52 chr17 38142076 38142172 -47296308 + L2 LINE L2 3220 3312 -1 436 291 73 24 chr17 38142219 38142384 -47296096 + MIR SINE MIR 77 249 -13 280 276 19 67 chr17 38142377 38142482 -47295998 - MIR SINE MIR -94 168 69 * 274 279 56 114 chr17 38143864 38144070 -47294410 + MIR3 SINE MIR 7 198 -62 1524 137 73 67 chr17 38144079 38144221 -47294259 + AluJb SINE Alu 1 141 -171 294 95 0 0 chr17 38144221 38144263 -47294217 + (TA)n Simple_repeat Simple_repeat 2 43 0 1524 137 73 67 chr17 38144263 38144420 -47294060 + AluJb SINE Alu 141 302 -10 1461 164 85 51 chr17 38144424 38144717 -47293763 + AluJo SINE Alu 1 303 -9 472 240 147 7 chr17 38145919 38146069 -47292411 + MIR SINE MIR 79 249 -13 423 208 36 119 chr17 38146067 38146235 -47292245 - L2 LINE L2 -4 3309 3156 * 483 273 58 70 chr17 38146332 38146410 -47292070 - MER5B DNA MER1_type -4 174 97 1864 120 46 7 chr17 38146410 38146693 -47291787 - AluSx SINE Alu -18 294 1 483 273 58 70 chr17 38146693 38146786 -47291694 - MER5B DNA MER1_type -81 97 5 332 233 118 19 chr17 38146801 38146927 -47291553 - MER5A DNA MER1_type -6 172 46 570 78 13 0 chr17 38147278 38147355 -47291125 - AluS SINE Alu -235 78 1 947 153 0 0 chr17 38147674 38147811 -47290669 + AluJo SINE Alu 7 143 -169 2146 115 3 0 chr17 38147813 38148117 -47290363 + AluSx SINE Alu 1 305 -7 530 170 62 0 chr17 38148127 38148218 -47290262 + LTR64 LTR ERVK 1 102 -456 2192 92 0 16 chr17 38148218 38148524 -47289956 - AluY SINE Alu -10 301 1 530 170 62 0 chr17 38148524 38148544 -47289936 + LTR64 LTR ERVK 102 119 -439 683 156 67 17 chr17 38148546 38148725 -47289755 + MER4-int LTR ERV1 3831 4018 -2580 2256 119 0 0 chr17 38148725 38149037 -47289443 - AluSx SINE Alu 0 312 1 1361 171 77 18 chr17 38149088 38149374 -47289106 + AluJo SINE Alu 9 311 -1 365 193 51 37 chr17 38149376 38149508 -47288972 + MER4-int LTR ERV1 4067 4748 -1850 1830 149 10 29 chr17 38149627 38149935 -47288545 - AluJo SINE Alu -10 302 1 1554 127 0 0 chr17 38150033 38150245 -47288235 + AluSx SINE Alu 1 212 -100 1108 167 0 102 chr17 38150245 38150291 -47288189 + AluJb SINE Alu 78 127 -185 1800 137 19 54 chr17 38150291 38150604 -47287876 - AluSx SINE Alu -10 302 1 1108 167 0 102 chr17 38150604 38150615 -47287865 + AluJb SINE Alu 127 138 -174 2223 97 0 3 chr17 38150615 38150915 -47287565 - AluSg SINE Alu -11 299 1 1108 167 0 102 chr17 38150915 38151101 -47287379 + AluJb SINE Alu 138 297 -15 22 0 0 0 chr17 38151104 38151126 -47287354 + AT_rich Low_complexity Low_complexity 1 22 0 1804 129 37 0 chr17 38151128 38151420 -47287060 + AluSx SINE Alu 1 302 0 2291 96 0 0 chr17 38151438 38151739 -47286741 + AluSx SINE Alu 1 301 -11 2122 72 29 7 chr17 38151847 38152126 -47286354 - AluSp SINE Alu -13 300 16 996 146 15 39 chr17 38152456 38152661 -47285819 + LTR64 LTR ERVK 1 200 -358 729 179 0 15 chr17 38152661 38152795 -47285685 + FLAM_C SINE Alu 1 132 -11 774 173 61 2 chr17 38152795 38153070 -47285410 + LTR64 LTR ERVK 191 545 -13 294 281 67 0 chr17 38153080 38153169 -47285311 + MIR SINE MIR 163 257 -5 280 192 68 14 chr17 38153219 38153292 -47285188 - MIR SINE MIR -93 169 93 794 152 0 15 chr17 38153878 38154010 -47284470 - AluJb SINE Alu -46 266 137 285 224 28 75 chr17 38154029 38154136 -47284344 + L2 LINE L2 2604 2705 -609 1313 128 51 0 chr17 38154146 38154368 -47284112 + AluJb SINE Alu 85 312 0 431 329 143 18 chr17 38155041 38155296 -47283184 + L2 LINE L2 2825 3047 -225 2368 78 10 3 chr17 38155296 38155603 -47282877 - AluSx SINE Alu -3 309 1 431 329 143 18 chr17 38155603 38155631 -47282849 + L2 LINE L2 3047 3070 -202 2268 53 43 0 chr17 38155631 38155913 -47282567 + AluYa5 SINE Alu 1 294 -17 431 329 143 18 chr17 38155913 38156026 -47282454 + L2 LINE L2 3070 3272 0 1544 154 27 57 chr17 38156193 38156491 -47281989 + AluJo SINE Alu 21 309 -3 301 281 117 23 chr17 38156997 38157125 -47281355 + MIR3 SINE MIR 5 144 -64 1911 130 3 17 chr17 38157136 38157437 -47281043 + AluSx SINE Alu 1 297 -15 1999 139 0 13 chr17 38158587 38158903 -47279577 - AluSx SINE Alu 0 312 1 2188 111 3 0 chr17 38159003 38159301 -47279179 - AluSq SINE Alu -14 299 1 276 331 11 17 chr17 38159462 38159640 -47278840 + GA-rich Low_complexity Low_complexity 3 179 0 2545 242 60 19 chr17 38160861 38161527 -47276953 - MER115 DNA AcHobo 0 693 1 917 267 52 0 chr17 38162087 38162319 -47276161 - MIR SINE MIR -7 255 12 190 284 49 25 chr17 38162660 38162741 -47275739 + L2 LINE L2 3007 3089 -183 185 125 0 21 chr17 38163498 38163546 -47274934 + (CGGGG)n Simple_repeat Simple_repeat 1 47 0 1950 145 0 3 chr17 38164927 38165231 -47273249 - AluSx SINE Alu -9 303 1 1471 191 56 30 chr17 38165248 38165552 -47272928 + AluJb SINE Alu 1 312 0 2054 104 7 10 chr17 38165556 38165845 -47272635 + AluSx SINE Alu 1 288 -24 232 280 106 15 chr17 38165969 38166040 -47272440 + L1MA10 LINE L1 6180 6243 -91 2171 107 0 16 chr17 38166040 38166348 -47272132 + AluSq SINE Alu 1 303 -10 232 280 106 15 chr17 38166348 38166408 -47272072 + L1MA10 LINE L1 6243 6323 -11 300 330 57 65 chr17 38167522 38167801 -47270679 + L2 LINE L2 2578 2854 -460 1919 122 42 14 chr17 38167818 38168105 -47270375 - AluSx SINE Alu -17 295 1 574 303 0 7 chr17 38168379 38168534 -47269946 + MIR SINE MIR 47 200 -62 1941 96 66 0 chr17 38168969 38169240 -47269240 + AluSg SINE Alu 9 297 -13 1057 184 0 5 chr17 38171011 38171362 -47267118 + AluJo SINE Alu 119 468 0 2287 97 0 7 chr17 38171533 38171843 -47266637 + AluSx SINE Alu 1 308 -4 1729 145 13 33 chr17 38172097 38172400 -47266080 + AluJo SINE Alu 1 297 -15 205 179 0 90 chr17 38172912 38172979 -47265501 + C-rich Low_complexity Low_complexity 5 65 0 2685 156 124 49 chr17 38173346 38173917 -47264563 + LTR18B LTR ERVL 1 614 0 374 282 38 53 chr17 38174137 38174268 -47264212 - MIR SINE MIR -62 146 18 560 305 96 34 chr17 38174506 38174631 -47263849 - L2 LINE L2 -3 3269 3153 2266 82 17 0 chr17 38174631 38174923 -47263557 + AluSx SINE Alu 1 297 -15 2348 87 0 3 chr17 38174923 38175234 -47263246 + AluSg SINE Alu 1 310 0 560 305 96 34 chr17 38175234 38175612 -47262868 - L2 LINE L2 -118 3154 2726 262 239 17 0 chr17 38176079 38176146 -47262334 - MIR SINE MIR -65 143 82 203 236 0 18 chr17 38178955 38179010 -47259470 + G-rich Low_complexity Low_complexity 4 57 0 452 293 48 20 chr17 38181046 38181246 -47257234 - MIR SINE MIR -24 238 27 1881 130 16 32 chr17 38181453 38181769 -47256711 + AluJb SINE Alu 1 311 -1 318 267 163 29 chr17 38183909 38184081 -47254399 + MER117 DNA MER1_type 1 195 -2 301 204 7 48 chr17 38186157 38186304 -47252176 + (CTGGGG)n Simple_repeat Simple_repeat 6 146 0 475 106 0 106 chr17 38186881 38186985 -47251495 + FLAM_A SINE Alu 44 136 -6 1007 100 0 0 chr17 38186992 38187122 -47251358 + FLAM_C SINE Alu 1 130 -3 1895 77 19 15 chr17 38188483 38188743 -47249737 + AluSx SINE Alu 52 312 0 2619 39 0 3 chr17 38188744 38189054 -47249426 + AluY SINE Alu 2 310 -1 2231 96 17 0 chr17 38189053 38189354 -47249126 + AluSq SINE Alu 1 306 -7 * 468 216 0 10 chr17 38191063 38191165 -47247315 - MIR SINE MIR -133 129 29 2424 77 0 0 chr17 38191368 38191678 -47246802 + AluY SINE Alu 1 310 -1 280 286 0 12 chr17 38192140 38192224 -47246256 + L1ME3 LINE L1 5631 5713 -2095 1676 139 61 3 chr17 38192549 38192844 -47245636 - AluJb SINE Alu 0 312 1 1641 164 32 11 chr17 38192845 38193125 -47245355 - AluJo SINE Alu -14 298 13 207 314 29 20 chr17 38195059 38195161 -47243319 - MIR SINE MIR -85 123 21 216 0 0 0 chr17 38195981 38196005 -47242475 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 371 215 6 0 chr17 38196387 38196564 -47241916 + (CA)n Simple_repeat Simple_repeat 2 179 0 1030 139 115 103 chr17 38197561 38197813 -47240667 - AluJo SINE Alu -19 293 39 201 337 24 0 chr17 38197848 38197931 -47240549 - MIR SINE MIR -115 147 63 231 200 0 0 chr17 38198505 38198550 -47239930 - MER5B DNA MER1_type 0 178 134 204 257 129 0 chr17 38198700 38198770 -47239710 + MIR SINE MIR 67 145 -117 1045 138 6 6 chr17 38199443 38199603 -47238877 + AluSg/x SINE Alu 129 288 -22 1620 141 59 24 chr17 38199983 38200273 -47238207 - AluSg SINE Alu 0 310 11 784 149 33 0 chr17 38200278 38200399 -47238081 - AluJb SINE Alu -11 301 177 195 286 181 23 chr17 38200401 38200534 -47237946 - MER5A DNA MER1_type -9 180 27 333 236 182 18 chr17 38200414 38200524 -47237956 + MER5B DNA MER1_type 25 152 -26 396 283 72 45 chr17 38201458 38201698 -47236782 + MIR SINE MIR 5 260 -2 340 244 115 51 chr17 38201708 38201864 -47236616 - MIR3 SINE MIR -6 202 37 2211 105 0 0 chr17 38202042 38202346 -47236134 + AluSx SINE Alu 2 305 -7 315 250 58 8 chr17 38202357 38202477 -47236003 + L1ME3 LINE L1 6035 6160 -2 2352 82 0 0 chr17 38202624 38202929 -47235551 + AluSc SINE Alu 1 305 -4 3665 72 4 8 chr17 38204192 38204677 -47233803 + L1PA4 LINE L1 5670 6152 -3 226 239 83 65 chr17 38204686 38204916 -47233564 + L1ME LINE L1 5677 5910 -211 360 0 0 0 chr17 38204975 38205015 -47233465 + (TG)n Simple_repeat Simple_repeat 1 40 0 1873 159 3 0 chr17 38205060 38205350 -47233130 + AluJo SINE Alu 1 291 -21 1623 111 13 4 chr17 38206427 38206661 -47231819 - AluY SINE Alu -18 293 58 1946 152 0 0 chr17 38207508 38207810 -47230670 + AluSx SINE Alu 1 302 -10 543 198 87 68 chr17 38207810 38207954 -47230526 - L1MC3 LINE L1 -816 6969 6818 1892 143 7 0 chr17 38207954 38208240 -47230240 - AluSx SINE Alu -24 288 1 543 198 87 68 chr17 38208240 38208297 -47230183 - L1MC3 LINE L1 -967 6818 6764 212 204 23 0 chr17 38208900 38208944 -47229536 + (CA)n Simple_repeat Simple_repeat 2 46 0 233 263 13 26 chr17 38208981 38209057 -47229423 - MIR3 SINE MIR -20 188 114 22 80 0 0 chr17 38209181 38209231 -47229249 + GC_rich Low_complexity Low_complexity 1 50 0 675 220 148 5 chr17 38210920 38211129 -47227351 - MIR SINE MIR -22 240 2 415 280 70 19 chr17 38211713 38211870 -47226610 + MIR3 SINE MIR 21 185 -23 189 206 0 0 chr17 38213515 38213549 -47224931 + L2 LINE L2 3249 3282 -31 2326 90 0 6 chr17 38213698 38214010 -47224470 - AluSg SINE Alu 0 310 1 183 243 0 62 chr17 38214017 38214082 -47224398 + L2 LINE L2 2915 2977 -300 423 253 0 11 chr17 38214376 38214471 -47224009 + AluJb SINE Alu 135 228 -84 443 238 59 0 chr17 38214529 38214630 -47223850 - AluJb SINE Alu -68 244 138 437 243 22 54 chr17 38214658 38214843 -47223637 + AluSg SINE Alu 2 180 -130 248 317 10 19 chr17 38214967 38215071 -47223409 - AluSg/x SINE Alu -107 195 93 920 112 0 0 chr17 38215601 38215726 -47222754 + AluJb SINE Alu 1 125 -187 447 323 124 26 chr17 38216093 38216319 -47222161 - MIR SINE MIR -10 252 5 1971 153 0 0 chr17 38216811 38217112 -47221368 + AluJb SINE Alu 4 304 -8 2291 97 0 7 chr17 38217112 38217421 -47221059 + AluSx SINE Alu 1 308 -4 473 151 0 0 chr17 38217573 38217646 -47220834 + AluSp/q SINE Alu 229 301 -12 469 275 50 30 chr17 38217672 38217756 -47220724 - L1MC4 LINE L1 -507 7535 7454 1253 215 136 0 chr17 38217756 38218058 -47220422 - MER2 DNA MER2_type -1 343 1 469 275 50 30 chr17 38218058 38218173 -47220307 - L1MC4 LINE L1 -588 7454 7332 1579 161 18 7 chr17 38218256 38218529 -47219951 + AluJb SINE Alu 32 307 -5 261 0 0 0 chr17 38219534 38219563 -47218917 + (A)n Simple_repeat Simple_repeat 1 29 0 1628 76 97 69 chr17 38219565 38219854 -47218626 + AluSq SINE Alu 1 297 -16 512 245 45 19 chr17 38219953 38220108 -47218372 - MIR SINE MIR -102 160 2 2348 67 0 3 chr17 38220144 38220442 -47218038 + AluY SINE Alu 1 297 -14 222 316 0 51 chr17 38220998 38221077 -47217403 + MIR SINE MIR 47 121 -141 2168 114 3 0 chr17 38221485 38221782 -47216698 + AluSx SINE Alu 1 298 -14 2300 96 0 3 chr17 38222121 38222433 -47216047 + AluSx SINE Alu 1 311 -1 2226 52 21 7 chr17 38224237 38224525 -47213955 - AluSx SINE Alu -15 297 6 457 286 77 10 chr17 38225285 38225481 -47212999 - L1MC4 LINE L1 0 8042 7834 1947 113 3 37 chr17 38225483 38225819 -47212661 - AluSx SINE Alu 0 312 1 1896 93 0 0 chr17 38225829 38226077 -47212403 - AluSp SINE Alu -6 307 60 701 108 100 85 chr17 38226132 38226213 -47212267 + AluJo/FLAM SINE Alu 1 86 -216 2059 120 0 19 chr17 38226213 38226521 -47211959 + AluSx SINE Alu 1 302 -10 701 108 100 85 chr17 38226521 38226569 -47211911 + AluJo/FLAM SINE Alu 86 132 -170 1807 151 17 3 chr17 38226807 38227098 -47211382 - AluJb SINE Alu -17 295 1 457 202 85 16 chr17 38227394 38227523 -47210957 - MIR SINE MIR 0 262 125 410 334 101 49 chr17 38227550 38227915 -47210565 + L2 LINE L2 2883 3266 -6 2012 120 17 0 chr17 38227967 38228268 -47210212 - AluSg SINE Alu -4 306 1 2292 95 0 3 chr17 38228276 38228582 -47209898 - AluSp SINE Alu -8 305 1 362 214 0 28 chr17 38229227 38229372 -47209108 + CT-rich Low_complexity Low_complexity 1 141 0 3553 39 4 4 chr17 38229586 38230270 -47208210 - L1P1 LINE L1 -401 5754 5071 741 235 77 72 chr17 38230269 38230351 -47208129 - L1ME LINE L1 -428 5693 5613 * 2025 98 69 0 chr17 38230351 38230629 -47207851 - AluSg SINE Alu -15 295 1 741 235 77 72 chr17 38230629 38230957 -47207523 - L1ME LINE L1 -508 5613 5256 759 154 0 8 chr17 38231225 38231348 -47207132 + FLAM_A SINE Alu 1 122 -11 33 0 0 0 chr17 38231348 38231381 -47207099 + AT_rich Low_complexity Low_complexity 1 33 0 343 100 17 0 chr17 38231478 38231538 -47206942 + Alu SINE Alu 242 302 0 385 200 61 35 chr17 38231571 38231686 -47206794 + FLAM_C SINE Alu 1 118 -15 7180 117 37 38 chr17 38231945 38232655 -47205825 + Tigger3b DNA MER2_type 2 711 -2317 2394 88 3 3 chr17 38232655 38232961 -47205519 + AluSx SINE Alu 1 306 -6 7180 117 37 38 chr17 38232961 38233481 -47204999 + Tigger3b DNA MER2_type 711 1230 -1 2322 101 0 0 chr17 38234056 38234353 -47204127 - AluSx SINE Alu -15 297 1 2226 104 3 0 chr17 38234907 38235194 -47203286 + AluSx SINE Alu 1 288 -24 375 277 91 16 chr17 38235731 38235939 -47202541 + MIR SINE MIR 38 262 0 2127 92 24 10 chr17 38236253 38236546 -47201934 + AluSx SINE Alu 1 297 -15 2084 122 0 7 chr17 38237329 38237625 -47200855 - AluSx SINE Alu -14 298 5 21 36 0 0 chr17 38237652 38237680 -47200800 + AT_rich Low_complexity Low_complexity 1 28 0 42 86 0 0 chr17 38237697 38237802 -47200678 + AT_rich Low_complexity Low_complexity 1 105 0 703 208 0 0 chr17 38237850 38237970 -47200510 - FLAM_A SINE Alu -12 121 2 1719 182 0 0 chr17 38238005 38238285 -47200195 - AluJb SINE Alu -9 303 24 2280 119 7 0 chr17 38238905 38239215 -47199265 - AluSx SINE Alu 0 312 1 2236 105 17 0 chr17 38239507 38239803 -47198677 - AluSx SINE Alu -11 301 1 2461 72 0 7 chr17 38240151 38240456 -47198024 - AluY SINE Alu -8 303 1 2075 129 3 7 chr17 38241244 38241538 -47196942 + AluSx SINE Alu 1 293 -19 478 272 138 12 chr17 38241778 38242032 -47196448 + L2 LINE L2 3028 3313 0 2230 80 21 7 chr17 38242153 38242442 -47196038 - AluSc SINE Alu -16 293 1 336 294 0 0 chr17 38242451 38242536 -47195944 + L2 LINE L2 3188 3272 0 2313 88 17 0 chr17 38243105 38243402 -47195078 - AluSx SINE Alu -9 303 2 467 263 51 32 chr17 38244458 38244614 -47193866 + MIR SINE MIR 104 262 0 510 17 0 0 chr17 38244759 38244818 -47193662 + (TCCA)n Simple_repeat Simple_repeat 2 60 0 1625 173 0 60 chr17 38244818 38245118 -47193362 - AluJo SINE Alu -30 282 1 2176 82 11 7 chr17 38245118 38245397 -47193083 - AluSg1 SINE Alu -9 300 21 2442 87 0 0 chr17 38245634 38245934 -47192546 + AluSc SINE Alu 1 300 -9 195 179 104 0 chr17 38246259 38246326 -47192154 - MIR SINE MIR -50 212 139 2810 166 64 57 chr17 38246331 38246511 -47191969 + L1MB7 LINE L1 5511 5688 -496 2142 99 0 56 chr17 38246511 38246833 -47191647 + AluSx SINE Alu 1 304 -8 2810 166 64 57 chr17 38246833 38247321 -47191159 + L1MB7 LINE L1 5688 6184 0 1084 82 8 0 chr17 38247725 38247859 -47190621 + AluSp SINE Alu 1 135 -178 2603 23 16 7 chr17 38247860 38248167 -47190313 + SVA Other Other 1067 1376 -10 360 0 0 0 chr17 38248450 38248490 -47189990 + (TG)n Simple_repeat Simple_repeat 1 40 0 2028 158 3 0 chr17 38248535 38248846 -47189634 + AluJb SINE Alu 1 312 0 1920 148 31 0 chr17 38249187 38249477 -47189003 + AluSx SINE Alu 1 299 -13 1388 146 66 114 chr17 38249546 38249717 -47188763 - Charlie5 DNA MER1_type 0 2624 2446 1731 148 0 11 chr17 38249717 38249981 -47188499 + AluJb SINE Alu 35 295 -17 1388 146 66 114 chr17 38249981 38250220 -47188260 - Charlie5 DNA MER1_type -178 2446 2234 680 181 8 8 chr17 38250229 38250356 -47188124 - MER3 DNA MER1_type -41 168 42 723 98 20 0 chr17 38250435 38250537 -47187943 + L1PA10 LINE L1 6065 6168 0 2105 115 27 0 chr17 38250594 38250889 -47187591 - AluSq SINE Alu -9 304 2 911 134 0 0 chr17 38251093 38251220 -47187260 + FLAM_C SINE Alu 1 127 -6 2258 119 0 0 chr17 38251695 38251998 -47186482 - AluSx SINE Alu -9 303 1 289 81 0 0 chr17 38252426 38252463 -47186017 + tRNA-Glu-GAG tRNA tRNA 1 37 -38 21 57 0 0 chr17 38253184 38253219 -47185261 + AT_rich Low_complexity Low_complexity 1 35 0 444 268 71 0 chr17 38253222 38253334 -47185146 + L2 LINE L2 3190 3309 -4 992 171 203 16 chr17 38253352 38253506 -47184974 - MER44D DNA MER2_type -1923 568 444 2485 80 0 10 chr17 38253506 38253817 -47184663 - AluY SINE Alu -3 308 1 992 171 203 16 chr17 38253817 38253913 -47184567 - MER44D DNA MER2_type -2047 444 1 756 163 0 0 chr17 38254014 38254137 -47184343 + FLAM_C SINE Alu 1 123 -10 1427 133 9 89 chr17 38254258 38254312 -47184168 - L1MB3 LINE L1 -3 6180 6123 1894 120 62 0 chr17 38254312 38254586 -47183894 - AluSx SINE Alu -21 291 1 1427 133 9 89 chr17 38254586 38254846 -47183634 - L1MB3 LINE L1 -60 6123 5891 2359 79 0 3 chr17 38255293 38255584 -47182896 - AluSc SINE Alu -19 290 1 345 210 25 0 chr17 38255584 38255665 -47182815 + Charlie5 DNA MER1_type 2542 2624 0 559 168 5 17 chr17 38255821 38255958 -47182522 - L1MB3 LINE L1 -200 5981 5852 2227 88 3 3 chr17 38256361 38256646 -47181834 - AluSc SINE Alu -19 290 6 260 271 31 31 chr17 38256650 38256789 -47181691 + CT-rich Low_complexity Low_complexity 1 139 0 21 0 0 0 chr17 38257086 38257107 -47181373 + AT_rich Low_complexity Low_complexity 1 21 0 1545 140 0 18 chr17 38257113 38257341 -47181139 - AluJo SINE Alu -61 251 28 22 0 0 0 chr17 38257528 38257550 -47180930 + AT_rich Low_complexity Low_complexity 1 22 0 784 217 0 0 chr17 38257622 38257774 -47180706 + FRAM SINE Alu 1 152 -24 312 27 0 0 chr17 38258317 38258354 -47180126 + (GAAA)n Simple_repeat Simple_repeat 1 37 0 248 363 62 18 chr17 38258934 38259047 -47179433 - L2 LINE L2 -8 3264 3147 2393 92 0 3 chr17 38259435 38259740 -47178740 - AluSg SINE Alu -2 308 5 2417 87 0 0 chr17 38260519 38260819 -47177661 - AluY SINE Alu -11 300 1 218 208 21 0 chr17 38260896 38260944 -47177536 + (CTA)n Simple_repeat Simple_repeat 2 50 0 1923 149 0 3 chr17 38261505 38261794 -47176686 + AluJb SINE Alu 6 293 -19 2286 111 0 3 chr17 38262046 38262352 -47176128 - AluSx SINE Alu -7 305 1 1830 176 13 0 chr17 38263165 38263466 -47175014 - AluJo SINE Alu -7 305 1 1766 176 3 17 chr17 38263495 38263796 -47174684 - AluJo SINE Alu -15 297 1 816 187 41 18 chr17 38264661 38264832 -47173648 - AluJo SINE Alu -16 296 122 29 94 0 0 chr17 38265044 38265129 -47173351 + AT_rich Low_complexity Low_complexity 1 85 0 1664 168 0 21 chr17 38265503 38265638 -47172842 + AluSg SINE Alu 1 137 -173 2508 72 0 3 chr17 38265638 38265942 -47172538 + AluSq SINE Alu 1 303 -10 1664 168 0 21 chr17 38265942 38266086 -47172394 + AluSg SINE Alu 137 274 -36 2532 70 0 3 chr17 38266086 38266388 -47172092 + AluSc SINE Alu 1 301 -8 884 189 0 33 chr17 38266388 38266568 -47171912 + AluSc SINE Alu 132 305 -4 279 235 62 12 chr17 38266621 38266702 -47171778 - L1ME LINE L1 -304 5817 5733 2073 146 0 9 chr17 38267071 38267386 -47171094 + AluJo SINE Alu 1 312 0 558 282 57 27 chr17 38267763 38268061 -47170419 - L1MC4 LINE L1 0 8042 7736 1178 141 0 6 chr17 38268091 38268268 -47170212 - AluSx SINE Alu -16 294 119 28 71 0 0 chr17 38268268 38268324 -47170156 + AT_rich Low_complexity Low_complexity 1 56 0 2931 16 0 3 chr17 38268326 38268640 -47169840 - SVA Other Other -7 1379 1067 1005 126 0 0 chr17 38268641 38268776 -47169704 - AluSx SINE Alu -177 135 1 973 189 265 11 chr17 38268801 38269156 -47169324 - L1MC4 LINE L1 -401 7641 7197 205 349 0 0 chr17 38269280 38269346 -47169134 + CT-rich Low_complexity Low_complexity 2 67 0 2332 111 0 0 chr17 38269719 38270016 -47168464 + AluSx SINE Alu 1 297 -15 229 98 0 0 chr17 38270102 38270143 -47168337 - Alu SINE Alu -2 301 261 1350 185 0 14 chr17 38270552 38270768 -47167712 + AluSg/x SINE Alu 90 302 -10 1743 146 31 14 chr17 38271360 38271648 -47166832 - AluJo SINE Alu -19 293 1 474 284 116 31 chr17 38271942 38272167 -47166313 - MIR SINE MIR -6 256 13 2232 110 0 10 chr17 38272225 38272525 -47165955 - AluSx SINE Alu -15 297 1 741 167 14 28 chr17 38273136 38273280 -47165200 - FLAM_C SINE Alu 0 143 2 2018 129 45 3 chr17 38273296 38273582 -47164898 - AluSx SINE Alu -14 298 1 189 107 0 0 chr17 38273715 38273743 -47164737 + (CA)n Simple_repeat Simple_repeat 1 28 0 2272 79 0 54 chr17 38274293 38274609 -47163871 - AluSq SINE Alu -14 299 1 182 37 37 0 chr17 38276704 38276731 -47161749 + (CCTG)n Simple_repeat Simple_repeat 2 29 0 351 332 32 5 chr17 38276766 38276956 -47161524 + MIR SINE MIR 34 228 -34 342 275 101 0 chr17 38278323 38278432 -47160048 - L2 LINE L2 -16 3256 3137 815 38 22 60 chr17 38278501 38278819 -47159661 + (TG)n Simple_repeat Simple_repeat 1 305 0 640 252 0 0 chr17 38279147 38279278 -47159202 - FLAM_C SINE Alu -1 132 2 2393 79 3 10 chr17 38279284 38279587 -47158893 - AluSq SINE Alu -12 301 1 277 136 0 0 chr17 38280947 38280991 -47157489 - Alu SINE Alu -2 300 257 1591 152 15 8 chr17 38280952 38281216 -47157264 - AluJb SINE Alu -17 295 30 1985 105 0 0 chr17 38281650 38281927 -47156553 - AluSx SINE Alu -4 308 32 1256 253 53 107 chr17 38282010 38282125 -47156355 + L1MC4 LINE L1 7332 7452 -590 1178 209 139 3 chr17 38282125 38282427 -47156053 + MER2 DNA MER2_type 1 343 -1 1256 253 53 107 chr17 38282427 38282549 -47155931 + L1MC4 LINE L1 7452 7579 -463 2126 114 0 0 chr17 38282549 38282838 -47155642 - AluSq SINE Alu -24 289 1 1256 253 53 107 chr17 38282838 38283129 -47155351 + L1MC4 LINE L1 7579 7884 -158 2428 70 0 0 chr17 38283129 38283431 -47155049 + AluSp SINE Alu 1 302 -11 1256 253 53 107 chr17 38283431 38283446 -47155034 + L1MC4 LINE L1 7884 7898 -144 1931 109 3 37 chr17 38283446 38283777 -47154703 + AluSx SINE Alu 1 321 0 1256 253 53 107 chr17 38283777 38283980 -47154500 + L1MC4 LINE L1 7898 8042 0 22 0 0 0 chr17 38284501 38284523 -47153957 + AT_rich Low_complexity Low_complexity 1 22 0 314 136 0 17 chr17 38284976 38285035 -47153445 + (TTCC)n Simple_repeat Simple_repeat 4 61 0 1927 113 3 11 chr17 38285253 38285536 -47152944 + AluSx SINE Alu 1 281 -31 183 42 0 0 chr17 38285539 38285563 -47152917 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1658 118 0 0 chr17 38285762 38285991 -47152489 - AluSx SINE Alu -21 291 63 23 0 0 0 chr17 38286091 38286114 -47152366 + GC_rich Low_complexity Low_complexity 1 23 0 267 152 0 0 chr17 38286429 38286475 -47152005 + C-rich Low_complexity Low_complexity 1 46 0 204 245 0 0 chr17 38286543 38286596 -47151884 + (TATATG)n Simple_repeat Simple_repeat 2 54 0 230 122 0 0 chr17 38286598 38286639 -47151841 + LTR66 LTR ERVL 398 438 -172 262 261 23 0 chr17 38286644 38286732 -47151748 - L1MC4 LINE L1 -1339 6703 6614 249 292 0 0 chr17 38286656 38286745 -47151735 + L1MC4 LINE L1 6614 6702 -1340 * 330 294 64 28 chr17 38286750 38286859 -47151621 - L1MC4 LINE L1 -1339 6703 6591 1164 160 9 5 chr17 38287199 38287411 -47151069 + AluJo SINE Alu 88 300 -12 743 188 0 0 chr17 38287573 38287690 -47150790 + FLAM_C SINE Alu 2 118 -25 2055 97 21 0 chr17 38287712 38288001 -47150479 + AluSg SINE Alu 1 295 -15 429 172 81 0 chr17 38288837 38288936 -47149544 + MIR SINE MIR 32 138 -70 2227 97 7 0 chr17 38289261 38289560 -47148920 - AluSx SINE Alu -10 302 2 1660 166 3 3 chr17 38289567 38289857 -47148623 - AluJb SINE Alu -9 303 14 2146 97 0 0 chr17 38291198 38291488 -47146992 + AluSg SINE Alu 14 303 -7 1932 103 21 7 chr17 38291488 38291779 -47146701 + AluSx SINE Alu 1 295 -17 1024 143 12 0 chr17 38291779 38291940 -47146540 + AluSg/x SINE Alu 134 296 -16 394 130 39 0 chr17 38293090 38293167 -47145313 - L1MB4 LINE L1 0 6180 6101 180 0 0 0 chr17 38293228 38293248 -47145232 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 742 142 53 0 chr17 38293253 38293366 -47145114 - AluSg/x SINE Alu -57 255 137 2186 118 0 0 chr17 38293367 38293672 -47144808 - AluSx SINE Alu -7 305 1 348 300 27 0 chr17 38293926 38294036 -47144444 + MIR3 SINE MIR 50 162 -46 1063 192 22 9 chr17 38294040 38294264 -47144216 - AluJo SINE Alu 0 312 86 800 149 0 8 chr17 38294282 38294416 -47144064 - AluJo SINE Alu -175 137 5 362 200 0 3 chr17 38294545 38294623 -47143857 + AluS SINE Alu 1 60 -243 1146 147 5 5 chr17 38294623 38294813 -47143667 + AluSg/x SINE Alu 113 302 -7 356 283 63 72 chr17 38295211 38295242 -47143238 + HAL1b LINE L1 1110 1140 -208 1619 199 0 3 chr17 38295242 38295543 -47142937 + AluJo SINE Alu 1 300 -12 356 283 63 72 chr17 38295543 38295748 -47142732 + HAL1b LINE L1 1140 1344 -4 33 56 0 0 chr17 38295817 38295871 -47142609 + AT_rich Low_complexity Low_complexity 1 54 0 1972 116 0 22 chr17 38295898 38296209 -47142271 - AluSx SINE Alu -8 304 1 227 211 42 105 chr17 38297005 38297100 -47141380 - MSR1 Satellite Satellite 0 111 23 227 211 42 105 chr17 38297125 38297320 -47141160 - MSR1 Satellite Satellite 0 182 1 227 211 42 105 chr17 38297425 38297520 -47140960 - MSR1 Satellite Satellite 0 111 23 227 211 42 105 chr17 38297545 38297640 -47140840 - MSR1 Satellite Satellite 0 111 23 1780 125 30 43 chr17 38298117 38298420 -47140060 + AluJb SINE Alu 1 299 -13 701 224 0 8 chr17 38299030 38299146 -47139334 + FLAM_C SINE Alu 1 117 -185 195 42 0 0 chr17 38299146 38299170 -47139310 + (TGAA)n Simple_repeat Simple_repeat 2 25 0 701 224 0 8 chr17 38299170 38299187 -47139293 + FLAM_C SINE Alu 117 133 -169 2108 104 10 0 chr17 38299224 38299521 -47138959 + AluSp SINE Alu 2 301 -12 1046 201 0 63 chr17 38299532 38299771 -47138709 + AluJo SINE Alu 1 224 -88 197 377 79 19 chr17 38300448 38300663 -47137817 + L2 LINE L2 2857 3084 -229 1047 218 32 0 chr17 38300858 38301074 -47137406 - MER58A DNA MER1_type 0 224 2 2150 110 3 3 chr17 38301348 38301647 -47136833 + AluSx SINE Alu 1 299 -13 566 223 223 6 chr17 38301726 38301901 -47136579 - MIR SINE MIR -15 247 35 186 352 57 19 chr17 38301981 38302086 -47136394 + L2 LINE L2 2867 2975 -338 1500 115 8 29 chr17 38302095 38302339 -47136141 + AluJo SINE Alu 66 304 -8 2225 93 10 0 chr17 38302600 38302901 -47135579 - AluSc SINE Alu -5 304 1 412 300 110 26 chr17 38302974 38303284 -47135196 - L1M4 LINE L1 -1833 4313 3978 2306 84 0 0 chr17 38303289 38303587 -47134893 + AluY SINE Alu 1 298 -13 316 169 0 0 chr17 38304015 38304074 -47134406 - LTR54 LTR ERV1 -49 461 403 398 170 185 52 chr17 38304100 38304235 -47134245 - MER105 DNA DNA -22 182 30 275 118 141 0 chr17 38304965 38305050 -47133430 - L1ME4a LINE L1 -10 6111 6015 838 175 39 0 chr17 38305078 38305232 -47133248 + AluJb SINE Alu 137 296 -16 30 0 0 0 chr17 38305287 38305317 -47133163 + AT_rich Low_complexity Low_complexity 1 30 0 180 0 0 0 chr17 38305400 38305420 -47133060 + (TTTG)n Simple_repeat Simple_repeat 3 22 0 684 134 0 0 chr17 38305433 38305530 -47132950 - AluJ/FLAM SINE Alu -214 98 2 2008 124 0 0 chr17 38305545 38305851 -47132629 - AluSx SINE Alu 0 306 1 1864 129 25 0 chr17 38306160 38306469 -47132011 + AluSq SINE Alu 1 316 0 1523 162 42 25 chr17 38306894 38307178 -47131302 + AluJo SINE Alu 1 289 -23 319 355 61 10 chr17 38307407 38307604 -47130876 + MIR SINE MIR 2 208 -54 2254 93 0 7 chr17 38307689 38307999 -47130481 - AluY SINE Alu -3 308 1 420 227 23 38 chr17 38308375 38308507 -47129973 - MIR SINE MIR -1 261 132 192 214 0 0 chr17 38308632 38308688 -47129792 + C-rich Low_complexity Low_complexity 1 56 0 525 209 0 27 chr17 38308751 38308861 -47129619 - AluJb SINE Alu -30 282 176 22 35 0 0 chr17 38308865 38308894 -47129586 + AT_rich Low_complexity Low_complexity 1 29 0 1926 161 3 0 chr17 38309216 38309527 -47128953 - AluJo SINE Alu 0 312 1 360 0 0 0 chr17 38309572 38309612 -47128868 + (CA)n Simple_repeat Simple_repeat 1 40 0 945 236 62 83 chr17 38309671 38309901 -47128579 - L1ME4a LINE L1 -211 5910 5677 7995 13 0 0 chr17 38309901 38310992 -47127488 - L1PA3 LINE L1 0 6155 5071 945 236 62 83 chr17 38310992 38311075 -47127405 - L1ME4a LINE L1 -444 5677 5594 1905 98 69 0 chr17 38311075 38311351 -47127129 - AluSg SINE Alu -15 295 1 945 236 62 83 chr17 38311351 38311679 -47126801 - L1ME4a LINE L1 -527 5594 5256 768 154 0 8 chr17 38311947 38312070 -47126410 + FLAM_A SINE Alu 1 122 -11 33 0 0 0 chr17 38312070 38312103 -47126377 + AT_rich Low_complexity Low_complexity 1 33 0 339 100 17 0 chr17 38312200 38312260 -47126220 + Alu SINE Alu 242 302 0 397 200 61 35 chr17 38312293 38312408 -47126072 + FLAM_C SINE Alu 1 118 -15 4162 108 49 47 chr17 38312667 38313377 -47125103 + Tigger3b DNA MER2_type 2 713 -518 2143 110 3 0 chr17 38313377 38313677 -47124803 + AluSx SINE Alu 1 301 -11 460 277 91 16 chr17 38314201 38314409 -47124071 + MIR SINE MIR 38 262 0 234 0 0 0 chr17 38317731 38317757 -47120723 + (A)n Simple_repeat Simple_repeat 1 26 0 547 206 61 73 chr17 38318498 38318690 -47119790 + MIR3 SINE MIR 4 197 -11 22 0 0 0 chr17 38319440 38319462 -47119018 + GC_rich Low_complexity Low_complexity 1 22 0 26 74 0 0 chr17 38319620 38319674 -47118806 + GC_rich Low_complexity Low_complexity 1 54 0 32 0 0 0 chr17 38319850 38319882 -47118598 + GC_rich Low_complexity Low_complexity 1 32 0 200 205 51 0 chr17 38321010 38321049 -47117431 + L2 LINE L2 3208 3248 -24 2306 90 0 6 chr17 38321193 38321505 -47116975 - AluSg SINE Alu 0 310 1 188 227 0 62 chr17 38321512 38321577 -47116903 + L2 LINE L2 2915 2977 -300 183 250 0 0 chr17 38321770 38321810 -47116670 + L2 LINE L2 3271 3310 -3 976 123 5 96 chr17 38321872 38321969 -47116511 + AluJb SINE Alu 135 208 -104 1308 155 66 69 chr17 38321969 38322148 -47116332 - AluJo SINE Alu 0 302 123 2204 85 0 3 chr17 38322148 38322442 -47116038 + AluSg SINE Alu 1 293 -17 1308 155 66 69 chr17 38322442 38322565 -47115915 - AluJo SINE Alu -179 123 1 976 123 5 96 chr17 38322565 38322654 -47115826 + AluJb SINE Alu 208 304 -8 430 238 122 20 chr17 38322659 38322806 -47115674 + MIR SINE MIR 51 212 -50 2185 83 3 45 chr17 38322955 38323268 -47115212 + AluSp SINE Alu 1 300 -13 343 120 0 186 chr17 38324265 38324302 -47114178 + MIR SINE MIR 51 93 -115 2433 55 0 0 chr17 38324302 38324613 -47113867 + AluY SINE Alu 1 311 0 343 120 0 186 chr17 38324613 38324699 -47113781 + MIR SINE MIR 93 150 -58 193 260 20 0 chr17 38325588 38325638 -47112842 - L2 LINE L2 -1 3312 3262 333 325 168 14 chr17 38325745 38325782 -47112698 - MIR SINE MIR -19 243 213 1982 108 0 52 chr17 38325782 38326089 -47112391 - AluSx SINE Alu -21 291 1 333 325 168 14 chr17 38326089 38326260 -47112220 - MIR SINE MIR -49 213 3 2222 99 0 0 chr17 38327714 38328016 -47110464 - AluSq SINE Alu -11 302 1 2211 106 0 6 chr17 38328530 38328841 -47109639 - AluSx SINE Alu -3 309 1 2295 72 0 41 chr17 38329387 38329705 -47108775 + AluSp SINE Alu 1 305 -8 325 242 154 23 chr17 38330258 38330389 -47108091 + MIR3 SINE MIR 49 202 -6 317 259 9 89 chr17 38331185 38331297 -47107183 + MIR3 SINE MIR 82 184 -24 212 204 23 0 chr17 38331444 38331488 -47106992 + (CA)n Simple_repeat Simple_repeat 2 46 0 233 263 13 26 chr17 38331525 38331601 -47106879 - MIR3 SINE MIR -20 188 114 25 75 0 0 chr17 38331725 38331778 -47106702 + GC_rich Low_complexity Low_complexity 1 53 0 181 294 20 0 chr17 38333526 38333577 -47104903 + MIR SINE MIR 40 91 -117 346 285 70 19 chr17 38334132 38334290 -47104190 + MIR SINE MIR 8 173 -89 3811 112 0 19 chr17 38334308 38334842 -47103638 - MER1A DNA MER1_type -3 524 1 2244 104 3 3 chr17 38334884 38335193 -47103287 + AluSp SINE Alu 1 309 -4 453 187 33 0 chr17 38335671 38335762 -47102718 + MIR SINE MIR 34 127 -135 2339 85 10 0 chr17 38335766 38336073 -47102407 - AluY SINE Alu 0 311 2 2151 81 0 11 chr17 38336094 38336377 -47102103 - AluSg SINE Alu -30 280 1 180 195 0 24 chr17 38336379 38336420 -47102060 + MIR SINE MIR 125 164 -98 2229 113 0 0 chr17 38336643 38336954 -47101526 - AluSx SINE Alu -1 311 1 210 369 88 42 chr17 38336990 38337382 -47101098 - L2 LINE L2 -4 3268 2831 2217 88 0 3 chr17 38337382 38337678 -47100802 + AluSx SINE Alu 1 295 -17 210 369 88 42 chr17 38337678 38337726 -47100754 - L2 LINE L2 -441 2831 2787 402 239 11 0 chr17 38338080 38338168 -47100312 - L2 LINE L2 -333 2980 2892 825 83 0 0 chr17 38338351 38338460 -47100020 - AluSg/x SINE Alu -16 294 186 190 275 121 22 chr17 38339295 38339386 -47099094 + L2 LINE L2 3155 3254 -18 462 320 39 20 chr17 38339404 38339607 -47098873 - MIR SINE MIR -53 209 3 246 225 14 0 chr17 38340006 38340077 -47098403 - L1M4 LINE L1 -3044 3102 3031 1082 168 11 0 chr17 38340077 38340262 -47098218 - AluSg/x SINE Alu 0 312 126 210 71 0 0 chr17 38340388 38340416 -47098064 + (TTTG)n Simple_repeat Simple_repeat 3 30 0 1543 160 4 26 chr17 38340417 38340686 -47097794 - AluSx SINE Alu -49 263 1 2121 103 10 0 chr17 38341619 38341909 -47096571 - AluSx SINE Alu -18 294 2 2249 67 0 51 chr17 38341922 38342236 -47096244 - AluY SINE Alu -13 298 1 522 322 30 0 chr17 38342679 38342881 -47095599 - MIR SINE MIR -21 241 34 182 37 37 0 chr17 38342916 38342943 -47095537 + (CAGG)n Simple_repeat Simple_repeat 2 29 0 702 152 0 0 chr17 38344999 38345104 -47093376 - AluJb SINE Alu -206 106 2 483 204 18 9 chr17 38345105 38345272 -47093208 - Tigger5 DNA MER2_type -2101 222 7 1558 185 21 11 chr17 38345336 38345623 -47092857 + AluJo SINE Alu 1 290 -22 185 315 0 0 chr17 38345646 38345700 -47092780 - L2 LINE L2 -35 3278 3225 1786 124 10 70 chr17 38346101 38346415 -47092065 + AluSx SINE Alu 1 295 -17 2211 93 7 0 chr17 38346415 38346706 -47091774 + AluSq SINE Alu 1 293 -20 2017 152 0 0 chr17 38346877 38347180 -47091300 + AluSp SINE Alu 1 303 -10 364 297 196 10 chr17 38347235 38347522 -47090958 - L2 LINE L2 -235 3078 2741 1875 144 7 0 chr17 38348369 38348661 -47089819 + AluJo SINE Alu 1 294 -18 2234 106 3 0 chr17 38348670 38348981 -47089499 + AluSp SINE Alu 1 312 -1 356 218 5 153 chr17 38350111 38350169 -47088311 + MIR3 SINE MIR 22 87 -121 2269 98 0 0 chr17 38350169 38350466 -47088014 - AluSx SINE Alu -12 300 4 356 218 5 153 chr17 38350466 38350609 -47087871 + MIR3 SINE MIR 87 193 -15 528 307 70 13 chr17 38353057 38353299 -47085181 + MIR SINE MIR 6 258 -4 253 360 50 10 chr17 38353415 38353515 -47084965 + MIR SINE MIR 43 146 -62 253 284 108 0 chr17 38353683 38353785 -47084695 - MIR SINE MIR -56 152 40 207 0 0 0 chr17 38354228 38354251 -47084229 + (TG)n Simple_repeat Simple_repeat 2 24 0 273 75 0 0 chr17 38354538 38354578 -47083902 + (GA)n Simple_repeat Simple_repeat 2 41 0 241 279 0 0 chr17 38356088 38356156 -47082324 + G-rich Low_complexity Low_complexity 2 69 0 225 65 0 0 chr17 38356829 38356860 -47081620 + (A)n Simple_repeat Simple_repeat 1 31 0 2232 78 13 23 chr17 38358297 38358605 -47079875 - AluY SINE Alu -6 305 1 1011 238 70 17 chr17 38359527 38359673 -47078807 + MER33 DNA MER1_type 6 143 -2442 1906 122 61 0 chr17 38359673 38359967 -47078513 - AluSx SINE Alu 0 312 1 1011 238 70 17 chr17 38359967 38360119 -47078361 + MER33 DNA MER1_type 143 320 -4 930 188 11 0 chr17 38361392 38361568 -47076912 - AluSg/x SINE Alu -1 309 132 1888 134 7 19 chr17 38361568 38361875 -47076605 - AluSq SINE Alu -10 303 1 1870 139 17 0 chr17 38362408 38362709 -47075771 + AluSx SINE Alu 1 306 -6 2197 113 0 0 chr17 38362709 38363018 -47075462 + AluSx SINE Alu 1 309 -3 2195 103 3 0 chr17 38363897 38364198 -47074282 + AluSx SINE Alu 1 302 -10 714 178 31 8 chr17 38364381 38364397 -47074083 - FLAM_C SINE Alu -169 133 119 225 0 0 0 chr17 38364397 38364422 -47074058 + (TG)n Simple_repeat Simple_repeat 2 26 0 714 178 31 8 chr17 38364422 38364534 -47073946 - FLAM_C SINE Alu -183 119 2 1907 141 9 31 chr17 38364555 38364874 -47073606 - AluJb SINE Alu 0 312 1 1253 162 5 9 chr17 38365273 38365489 -47072991 - AluJb SINE Alu -12 300 86 2174 101 3 3 chr17 38367489 38367796 -47070684 + AluSc SINE Alu 2 308 -1 2397 67 3 0 chr17 38369014 38369311 -47069169 - AluSg SINE Alu -12 298 1 2065 148 0 0 chr17 38369675 38369986 -47068494 + AluJo SINE Alu 1 311 -1 2085 102 0 11 chr17 38369986 38370271 -47068209 + AluSg SINE Alu 1 282 -28 195 42 0 0 chr17 38370714 38370738 -47067742 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 780 263 115 11 chr17 38370784 38371160 -47067320 - L1ME3A LINE L1 -211 5951 5536 2050 116 31 0 chr17 38371217 38371509 -47066971 + AluSg SINE Alu 3 303 -7 600 261 119 31 chr17 38371536 38371796 -47066684 - L1ME4a LINE L1 -3 6118 5836 1946 132 27 0 chr17 38371854 38372149 -47066331 - AluSx SINE Alu -9 303 1 2300 93 10 0 chr17 38373555 38373865 -47064615 - AluSp SINE Alu 0 313 1 2430 58 13 3 chr17 38373870 38374178 -47064302 - AluY SINE Alu 0 311 1 565 111 0 0 chr17 38374330 38374411 -47064069 + Tigger3(Golem) DNA MER2_type 13 93 -2936 1172 171 14 24 chr17 38374422 38374632 -47063848 + Tigger3(Golem) DNA MER2_type 2818 3025 -4 1670 181 0 0 chr17 38375108 38375400 -47063080 + AluJb SINE Alu 14 305 -7 1950 103 21 7 chr17 38375400 38375691 -47062789 + AluSx SINE Alu 1 295 -17 1039 147 12 0 chr17 38375691 38375854 -47062626 + AluSg/x SINE Alu 132 296 -14 403 130 39 0 chr17 38377002 38377079 -47061401 - L1MB4 LINE L1 0 6180 6101 180 0 0 0 chr17 38377140 38377160 -47061320 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 745 133 42 70 chr17 38377165 38377279 -47061201 - AluSg/x SINE Alu -57 253 142 2208 118 0 0 chr17 38377279 38377584 -47060896 - AluSx SINE Alu -7 305 1 745 133 42 70 chr17 38377584 38377612 -47060868 - AluSg/x SINE Alu -168 142 115 351 300 27 0 chr17 38377838 38377948 -47060532 + MIR3 SINE MIR 50 162 -46 1102 192 22 9 chr17 38377952 38378176 -47060304 - AluJo SINE Alu 0 312 86 814 149 0 8 chr17 38378194 38378328 -47060152 - AluJo SINE Alu -175 137 5 351 200 0 3 chr17 38378457 38378535 -47059945 + AluS SINE Alu 1 60 -243 1165 147 5 5 chr17 38378535 38378725 -47059755 + AluSg/x SINE Alu 113 302 -7 398 289 58 74 chr17 38379095 38379154 -47059326 + HAL1b LINE L1 1110 1168 -4953 1663 199 0 3 chr17 38379154 38379455 -47059025 + AluJo SINE Alu 1 300 -12 398 289 58 74 chr17 38379455 38379672 -47058808 + HAL1b LINE L1 1168 6121 0 33 56 0 0 chr17 38379729 38379783 -47058697 + AT_rich Low_complexity Low_complexity 1 54 0 1994 116 0 22 chr17 38379810 38380121 -47058359 - AluSx SINE Alu -8 304 1 227 211 42 105 chr17 38380917 38381012 -47057468 - MSR1 Satellite Satellite 0 111 23 227 211 42 105 chr17 38381117 38381212 -47057268 - MSR1 Satellite Satellite 0 111 23 227 211 42 105 chr17 38381237 38381332 -47057148 - MSR1 Satellite Satellite 0 111 23 1780 125 30 43 chr17 38381809 38382112 -47056368 + AluJb SINE Alu 1 299 -13 701 224 0 8 chr17 38382722 38382838 -47055642 + FLAM_C SINE Alu 1 117 -185 195 42 0 0 chr17 38382838 38382862 -47055618 + (TGAA)n Simple_repeat Simple_repeat 2 25 0 701 224 0 8 chr17 38382862 38382879 -47055601 + FLAM_C SINE Alu 117 133 -169 2108 104 10 0 chr17 38382916 38383213 -47055267 + AluSp SINE Alu 2 301 -12 1046 201 0 63 chr17 38383224 38383463 -47055017 + AluJo SINE Alu 1 224 -88 197 377 79 19 chr17 38384140 38384355 -47054125 + L2 LINE L2 2857 3084 -229 1047 218 32 0 chr17 38384550 38384766 -47053714 - MER58A DNA MER1_type 0 224 2 2150 110 3 3 chr17 38385040 38385339 -47053141 + AluSx SINE Alu 1 299 -13 566 223 223 6 chr17 38385418 38385593 -47052887 - MIR SINE MIR -15 247 35 186 352 57 19 chr17 38385673 38385778 -47052702 + L2 LINE L2 2867 2975 -338 1500 115 8 29 chr17 38385787 38386031 -47052449 + AluJo SINE Alu 66 304 -8 2244 90 10 0 chr17 38386291 38386592 -47051888 - AluSc SINE Alu -5 304 1 412 300 110 26 chr17 38386665 38386975 -47051505 - L1M4 LINE L1 -1833 4313 3978 2311 71 0 3 chr17 38386980 38387274 -47051206 + AluSc SINE Alu 1 293 -16 2046 100 0 17 chr17 38387274 38387573 -47050907 + AluSc SINE Alu 1 294 -15 781 144 0 8 chr17 38387574 38387692 -47050788 - AluJo/FLAM SINE Alu -195 117 1 267 281 60 0 chr17 38387699 38387821 -47050659 - L1P LINE L1 -2477 3669 3547 2376 83 3 0 chr17 38387823 38388135 -47050345 + AluSp SINE Alu 1 313 0 1727 175 0 16 chr17 38388715 38389018 -47049462 - AluJb SINE Alu -14 298 1 2167 90 16 13 chr17 38389746 38390058 -47048422 + AluSq SINE Alu 1 313 0 2725 119 39 2 chr17 38390411 38390824 -47047656 + MSTA LTR MaLR 1 428 0 759 124 7 97 chr17 38391520 38391665 -47046815 - FLAM_C SINE Alu -1 132 1 1227 176 110 15 chr17 38391731 38392003 -47046477 - AluJb SINE Alu -14 298 1 392 296 151 11 chr17 38392041 38392227 -47046253 + MIR SINE MIR 45 256 -6 2114 113 7 0 chr17 38392614 38392914 -47045566 + AluSp SINE Alu 1 302 -11 1391 140 8 25 chr17 38393190 38393426 -47045054 - AluJo SINE Alu -80 232 1 1043 174 15 64 chr17 38393609 38393690 -47044790 - Charlie5 DNA MER1_type 0 2624 2541 2349 88 0 0 chr17 38393690 38393997 -47044483 + AluSc SINE Alu 1 307 -2 1043 174 15 64 chr17 38393997 38394088 -47044392 - Charlie5 DNA MER1_type -83 2541 2467 1416 176 83 0 chr17 38394088 38394366 -47044114 - AluJb SINE Alu -11 301 1 1043 174 15 64 chr17 38394366 38394457 -47044023 - Charlie5 DNA MER1_type -157 2467 2373 1289 121 54 31 chr17 38394607 38394831 -47043649 - AluSg/x SINE Alu -11 299 71 252 229 0 33 chr17 38394834 38394895 -47043585 + AluSq/x SINE Alu 76 134 -169 2268 76 0 0 chr17 38394898 38395186 -47043294 + AluSg SINE Alu 1 288 -22 603 126 0 0 chr17 38395423 38395510 -47042970 + AluSg/x SINE Alu 212 298 -11 1574 133 63 3 chr17 38395634 38395905 -47042575 + MER33 DNA MER1_type 1 284 -40 2181 117 0 0 chr17 38395909 38396247 -47042233 + AluSx SINE Alu 5 342 0 272 204 0 0 chr17 38396252 38396306 -47042174 + MER33 DNA MER1_type 309 362 -1 1708 161 7 3 chr17 38396422 38396713 -47041767 - AluJo SINE Alu -20 292 1 2159 94 17 0 chr17 38397009 38397307 -47041173 - AluSg SINE Alu -7 303 1 2249 101 0 0 chr17 38397366 38397663 -47040817 + AluSg SINE Alu 1 297 -13 316 169 0 0 chr17 38398091 38398150 -47040330 - LTR54 LTR ERV1 -49 461 403 398 170 185 52 chr17 38398176 38398311 -47040169 - MER105 DNA DNA -22 182 30 275 118 141 0 chr17 38399041 38399126 -47039354 - L1ME4a LINE L1 -10 6111 6015 838 175 39 0 chr17 38399154 38399308 -47039172 + AluJb SINE Alu 137 296 -16 30 0 0 0 chr17 38399363 38399393 -47039087 + AT_rich Low_complexity Low_complexity 1 30 0 180 0 0 0 chr17 38399476 38399496 -47038984 + (TTTG)n Simple_repeat Simple_repeat 3 22 0 684 134 0 0 chr17 38399509 38399606 -47038874 - AluJ/FLAM SINE Alu -214 98 2 2008 124 0 0 chr17 38399621 38399927 -47038553 - AluSx SINE Alu 0 306 1 1864 129 25 0 chr17 38400236 38400545 -47037935 + AluSq SINE Alu 1 316 0 1523 162 42 25 chr17 38400970 38401254 -47037226 + AluJo SINE Alu 1 289 -23 319 355 61 10 chr17 38401483 38401680 -47036800 + MIR SINE MIR 2 208 -54 2254 93 0 7 chr17 38401765 38402075 -47036405 - AluY SINE Alu -3 308 1 867 206 18 96 chr17 38402451 38402618 -47035862 - MIR SINE MIR -1 261 121 2497 56 0 0 chr17 38402618 38402921 -47035559 + AluY SINE Alu 1 303 -8 867 206 18 96 chr17 38402921 38403025 -47035455 - MIR SINE MIR -141 121 11 885 118 0 22 chr17 38403036 38403171 -47035309 - FLAM_C SINE Alu 0 133 2 2173 111 3 0 chr17 38403202 38403500 -47034980 + AluSp SINE Alu 1 299 -14 382 307 93 57 chr17 38403544 38403844 -47034636 + L3 LINE CR1 971 1281 -296 282 253 117 45 chr17 38403916 38404038 -47034442 + MER5B DNA MER1_type 1 138 -40 2004 107 10 10 chr17 38404038 38404336 -47034144 + AluSq SINE Alu 1 298 -15 282 253 117 45 chr17 38404336 38404367 -47034113 + MER5B DNA MER1_type 138 165 -13 299 298 21 0 chr17 38404438 38404532 -47033948 + MER5B DNA MER1_type 9 104 -74 343 339 27 54 chr17 38404605 38404971 -47033509 - L2 LINE L2 -524 2790 2369 415 323 37 6 chr17 38405221 38405382 -47033098 + L2 LINE L2 2617 2782 -532 716 226 28 60 chr17 38405388 38405605 -47032875 + MIR SINE MIR 32 241 -21 220 198 198 0 chr17 38405691 38405772 -47032708 + L2 LINE L2 2862 2958 -314 212 313 0 16 chr17 38405779 38405843 -47032637 - MIR SINE MIR -198 64 2 * 435 239 15 104 chr17 38405843 38405969 -47032511 + L2 LINE L2 3199 3312 -1 1791 149 0 27 chr17 38406295 38406591 -47031889 - AluJb SINE Alu -24 288 1 1506 108 0 0 chr17 38407419 38407622 -47030858 - AluSq SINE Alu -110 203 1 1403 239 118 18 chr17 38407881 38408373 -47030107 + MLT1G LTR MaLR 2 590 0 2279 100 0 0 chr17 38408484 38408794 -47029686 - AluSg SINE Alu 0 310 1 1738 249 38 59 chr17 38408818 38409229 -47029251 + L2 LINE L2 2151 2548 -766 2001 148 0 0 chr17 38409229 38409534 -47028946 + AluSx SINE Alu 1 305 -7 1738 249 38 59 chr17 38409534 38409697 -47028783 + L2 LINE L2 2548 2713 -601 2142 104 0 3 chr17 38409703 38410011 -47028469 + AluSx SINE Alu 6 312 0 1081 133 6 22 chr17 38410012 38410193 -47028287 + AluSg/x SINE Alu 118 295 -15 727 234 258 31 chr17 38410197 38410686 -47027794 + L2 LINE L2 2710 3312 -1 769 176 15 0 chr17 38410897 38411028 -47027452 + FLAM_A SINE Alu 1 133 0 1670 138 0 0 chr17 38411291 38411561 -47026919 - AluSx SINE Alu 0 308 39 3227 84 4 34 chr17 38411578 38411919 -47026561 - L1PA14 LINE L1 0 6161 5835 1962 100 11 4 chr17 38411919 38412226 -47026254 + AluSg SINE Alu 1 309 0 3227 84 4 34 chr17 38412226 38412357 -47026123 - L1PA14 LINE L1 -326 5835 5702 1567 171 13 44 chr17 38412478 38412794 -47025686 - AluJo SINE Alu 0 312 7 1823 114 71 0 chr17 38412810 38413091 -47025389 - AluSx SINE Alu -11 301 1 2268 61 0 58 chr17 38413091 38413403 -47025077 - AluSx SINE Alu -18 294 1 1620 128 86 21 chr17 38413458 38413748 -47024732 - AluSx SINE Alu -3 309 1 379 205 26 0 chr17 38413764 38413842 -47024638 - L1MEd LINE L1 -6037 82 3 657 308 23 52 chr17 38413844 38414191 -47024289 - L2 LINE L2 -753 2561 2225 2137 94 0 16 chr17 38414228 38414535 -47023945 + AluSp SINE Alu 1 302 -11 1947 116 0 30 chr17 38414539 38414840 -47023640 + AluSq SINE Alu 1 292 -21 4052 143 51 12 chr17 38414855 38415540 -47022940 + L1MC2 LINE L1 5442 6153 -191 838 243 0 0 chr17 38415540 38415713 -47022767 + FRAM SINE Alu 1 173 -3 962 168 42 0 chr17 38415719 38415909 -47022571 + L1MC2 LINE L1 6132 6329 -15 2080 114 10 3 chr17 38415909 38416217 -47022263 + AluSq SINE Alu 1 310 -3 1273 131 5 0 chr17 38416219 38416418 -47022062 + AluSg/x SINE Alu 109 308 -2 25 0 0 0 chr17 38416421 38416446 -47022034 + AT_rich Low_complexity Low_complexity 1 25 0 2422 44 14 0 chr17 38416447 38416742 -47021738 + AluY SINE Alu 1 299 -12 2294 98 0 7 chr17 38417165 38417472 -47021008 + AluSq SINE Alu 1 305 -8 275 183 268 63 chr17 38417553 38417695 -47020785 - MIR SINE MIR -86 176 6 30 27 0 0 chr17 38418347 38418384 -47020096 + AT_rich Low_complexity Low_complexity 1 37 0 2195 100 3 3 chr17 38418389 38418700 -47019780 + AluSp SINE Alu 3 313 0 2217 103 0 0 chr17 38418711 38419012 -47019468 + AluSg SINE Alu 1 301 -9 948 194 11 0 chr17 38419026 38419206 -47019274 + Charlie1 DNA MER1_type 1834 2015 -746 1527 82 0 0 chr17 38419208 38419404 -47019076 + AluSc SINE Alu 101 296 -13 2243 86 0 0 chr17 38419406 38419698 -47018782 + AluY SINE Alu 1 292 -19 888 135 147 0 chr17 38420074 38420230 -47018250 - AluSg/x SINE Alu -4 306 128 1292 84 0 0 chr17 38420824 38420991 -47017489 - AluSg/x SINE Alu -9 301 135 2003 125 13 3 chr17 38421085 38421388 -47017092 - AluSx SINE Alu -6 306 1 1967 97 42 7 chr17 38422875 38423164 -47015316 - AluSg SINE Alu -11 299 1 2206 91 0 13 chr17 38423223 38423530 -47014950 - AluSx SINE Alu -9 303 1 1107 185 10 0 chr17 38423559 38423764 -47014716 + AluJo SINE Alu 86 292 -20 553 369 53 4 chr17 38423771 38424015 -47014465 - MIR SINE MIR 0 262 7 2342 56 0 23 chr17 38424285 38424590 -47013890 + AluY SINE Alu 1 298 -13 195 322 68 48 chr17 38424868 38425014 -47013466 + L2 LINE L2 2887 3035 -237 783 254 125 9 chr17 38425084 38425308 -47013172 - MIR SINE MIR 0 262 13 2307 80 10 0 chr17 38425485 38425784 -47012696 - AluY SINE Alu -9 302 1 1954 113 0 0 chr17 38425924 38426198 -47012282 - AluSx SINE Alu -38 274 1 927 96 0 37 chr17 38426208 38426344 -47012136 - FLAM_C SINE Alu -2 131 1 187 279 0 0 chr17 38426879 38426922 -47011558 + MIR SINE MIR 205 247 -15 2194 46 4 7 chr17 38426950 38427270 -47011210 - AluY SINE Alu 0 320 2 1850 141 0 3 chr17 38427399 38427689 -47010791 - AluJb SINE Alu -15 297 9 330 200 0 0 chr17 38427822 38427877 -47010603 + MER3 DNA MER1_type 2 56 -153 2123 120 0 0 chr17 38428068 38428367 -47010113 + AluSx SINE Alu 1 299 -13 2282 87 0 3 chr17 38428842 38429141 -47009339 + AluSg SINE Alu 3 300 -10 238 261 92 69 chr17 38429180 38429310 -47009170 + MIR SINE MIR 55 187 -75 197 128 0 26 chr17 38429337 38429376 -47009104 + (TTTC)n Simple_repeat Simple_repeat 3 40 0 529 211 19 0 chr17 38429431 38429535 -47008945 - FLAM_A SINE Alu -36 106 1 1752 108 12 15 chr17 38433527 38433615 -47004865 + AluSg SINE Alu 44 131 -179 2201 107 0 0 chr17 38433615 38433914 -47004566 + AluSq SINE Alu 1 299 -14 1752 108 12 15 chr17 38433914 38434084 -47004396 + AluSg SINE Alu 131 301 -9 2052 110 45 0 chr17 38434155 38434446 -47004034 - AluSq SINE Alu -9 304 1 1538 187 26 30 chr17 38434472 38434777 -47003703 + AluJo SINE Alu 1 304 -8 2391 68 10 7 chr17 38434801 38435109 -47003371 + AluSq SINE Alu 1 309 -4 2017 138 0 0 chr17 38435195 38435491 -47002989 + AluSx SINE Alu 1 296 -16 306 375 46 29 chr17 38435512 38435752 -47002728 + L2 LINE L2 2852 3095 -177 725 256 24 49 chr17 38435831 38436077 -47002403 - MIR SINE MIR 0 262 23 24 0 0 0 chr17 38436184 38436208 -47002272 + AT_rich Low_complexity Low_complexity 1 24 0 2127 100 3 0 chr17 38436215 38436504 -47001976 + AluSx SINE Alu 1 290 -22 725 205 42 96 chr17 38436510 38436749 -47001731 - MIR SINE MIR 0 262 37 383 103 0 0 chr17 38436776 38436834 -47001646 - LTR26B LTR ERV1 -473 58 1 2363 76 0 10 chr17 38437167 38437481 -47000999 - AluY SINE Alu 0 311 1 829 160 23 74 chr17 38437481 38437648 -47000832 - AluSg/x SINE Alu -16 294 135 188 277 134 17 chr17 38437762 38437881 -47000599 + L2 LINE L2 2827 2959 -313 2202 118 0 6 chr17 38438010 38438323 -47000157 - AluSx SINE Alu -1 311 1 2085 94 3 62 chr17 38438323 38438643 -46999837 - AluSx SINE Alu -11 301 1 1438 163 3 113 chr17 38438646 38438983 -46999497 - AluJb SINE Alu -1 301 2 1994 57 0 60 chr17 38439392 38439674 -46998806 - AluY SINE Alu -9 302 38 403 227 10 18 chr17 38439801 38439927 -46998553 + MIR SINE MIR 32 153 -63 1046 83 0 0 chr17 38440018 38440150 -46998330 + AluSp SINE Alu 1 132 -181 2047 103 7 7 chr17 38440152 38440452 -46998028 + AluSq SINE Alu 1 300 -13 348 262 47 0 chr17 38440457 38440564 -46997916 + MIR SINE MIR 151 262 0 2342 77 3 0 chr17 38440844 38441142 -46997338 - AluSp SINE Alu -1 312 14 451 103 29 0 chr17 38441146 38441214 -46997266 + AluSg/x SINE Alu 218 287 -22 412 93 0 0 chr17 38441217 38441271 -46997209 + Alu SINE Alu 3 56 -254 702 152 0 0 chr17 38441514 38441619 -46996861 - AluJb SINE Alu -206 106 2 506 214 298 12 chr17 38441620 38441788 -46996692 - Tigger5 DNA MER2_type -2101 222 7 1520 186 25 7 chr17 38441852 38442137 -46996343 + AluJo SINE Alu 1 290 -22 190 406 0 0 chr17 38442159 38442260 -46996220 - L2 LINE L2 -34 3238 3138 1786 124 10 70 chr17 38442614 38442928 -46995552 + AluSx SINE Alu 1 295 -17 2103 90 7 10 chr17 38442928 38443218 -46995262 + AluSq SINE Alu 1 289 -24 674 252 0 0 chr17 38443236 38443367 -46995113 + FLAM_C SINE Alu 2 132 -1 815 38 22 60 chr17 38443695 38444013 -46994467 + (CA)n Simple_repeat Simple_repeat 1 305 0 343 294 92 0 chr17 38444082 38444201 -46994279 + L2 LINE L2 3137 3266 -6 450 346 30 0 chr17 38445547 38445749 -46992731 - MIR SINE MIR -21 241 34 182 37 37 0 chr17 38445784 38445811 -46992669 + (CAGG)n Simple_repeat Simple_repeat 2 29 0 2279 103 0 3 chr17 38447946 38448257 -46990223 + AluSx SINE Alu 1 310 -2 1762 183 0 0 chr17 38448268 38448563 -46989917 + AluJo SINE Alu 1 295 -17 243 277 73 66 chr17 38448563 38448700 -46989780 + L1MC4a LINE L1 5633 5770 -2038 275 281 210 14 chr17 38448701 38448982 -46989498 + L1MC4a LINE L1 5830 6165 -1643 2322 66 7 3 chr17 38450241 38450546 -46987934 - AluSp SINE Alu -3 310 5 2058 122 16 0 chr17 38450552 38450856 -46987624 - AluSx SINE Alu -3 309 1 380 259 65 9 chr17 38450899 38451007 -46987473 - MER5A DNA MER1_type -68 121 8 1643 152 65 0 chr17 38452052 38452329 -46986151 - AluJo SINE Alu -15 297 3 1665 143 47 40 chr17 38452420 38452536 -46985944 + AluJo SINE Alu 1 115 -197 186 43 0 0 chr17 38452536 38452559 -46985921 + (TAAA)n Simple_repeat Simple_repeat 1 23 0 1665 143 47 40 chr17 38452559 38452742 -46985738 + AluJo SINE Alu 115 302 -10 2322 64 0 7 chr17 38452742 38453038 -46985442 + AluY SINE Alu 1 294 -17 1731 138 35 0 chr17 38453247 38453555 -46984925 - AluSx SINE Alu 0 312 1 2113 97 4 0 chr17 38453583 38453862 -46984618 + AluSc SINE Alu 1 280 -29 207 100 0 0 chr17 38453862 38453892 -46984588 + (TAAG)n Simple_repeat Simple_repeat 2 31 0 342 0 0 0 chr17 38454249 38454287 -46984193 + (TG)n Simple_repeat Simple_repeat 1 38 0 2014 128 13 0 chr17 38454602 38454900 -46983580 + AluSx SINE Alu 1 302 -10 2304 97 3 3 chr17 38454900 38455211 -46983269 + AluSp SINE Alu 1 311 -2 424 272 49 49 chr17 38455325 38455385 -46983095 - L2 LINE L2 -97 3216 3157 1960 98 3 80 chr17 38455385 38455712 -46982768 + AluSx SINE Alu 1 302 -10 424 272 49 49 chr17 38455712 38455835 -46982645 - L2 LINE L2 -155 3158 3033 1369 191 51 0 chr17 38455837 38456136 -46982344 - AluJo SINE Alu 0 323 12 520 323 56 5 chr17 38456147 38456342 -46982138 - L2 LINE L2 -277 3036 2832 378 255 16 138 chr17 38456378 38456444 -46982036 - L1ME4a LINE L1 -199 5922 5850 2235 91 0 10 chr17 38456444 38456741 -46981739 + AluSx SINE Alu 1 294 -18 378 255 16 138 chr17 38456741 38456863 -46981617 - L1ME4a LINE L1 -271 5850 5768 1854 157 3 0 chr17 38456863 38457156 -46981324 + AluJo SINE Alu 3 296 -16 378 255 16 138 chr17 38457156 38457213 -46981267 - L1ME4a LINE L1 -353 5768 5706 670 282 50 64 chr17 38457726 38457848 -46980632 - L3 LINE CR1 -11 1566 1444 2133 117 7 0 chr17 38457848 38458148 -46980332 + AluSx SINE Alu 1 302 -10 670 282 50 64 chr17 38458148 38458323 -46980157 - L3 LINE CR1 -133 1444 1273 1814 148 17 3 chr17 38458534 38458831 -46979649 + AluSx SINE Alu 1 301 -11 321 68 0 0 chr17 38460211 38460255 -46978225 + (TG)n Simple_repeat Simple_repeat 2 45 0 809 61 0 0 chr17 38462840 38462939 -46975541 - AluY SINE Alu -219 99 1 31 0 0 0 chr17 38463158 38463189 -46975291 + AT_rich Low_complexity Low_complexity 1 31 0 1266 77 29 0 chr17 38463189 38463359 -46975121 - AluSq SINE Alu -138 175 1 338 284 52 0 chr17 38463499 38463633 -46974847 + L1MB7 LINE L1 5893 6033 -151 2015 117 6 25 chr17 38463638 38463955 -46974525 - AluSx SINE Alu -1 311 1 477 0 0 0 chr17 38463968 38464021 -46974459 + (TTTTA)n Simple_repeat Simple_repeat 3 55 0 257 186 0 0 chr17 38464024 38464067 -46974413 - MER57A LTR ERV1 -65 338 296 634 136 79 7 chr17 38464067 38464207 -46974273 + L1MB8 LINE L1 6024 6173 -5 1648 162 6 41 chr17 38464210 38464524 -46973956 + AluJo SINE Alu 1 303 -9 1428 134 14 9 chr17 38464720 38464943 -46973537 + AluJo SINE Alu 84 307 -5 445 169 12 0 chr17 38464948 38465031 -46973449 + MER67C LTR ERV1 361 444 -266 * 1547 153 24 44 chr17 38465015 38465032 -46973448 + MER67C LTR ERV1 343 359 -351 2166 93 7 29 chr17 38465032 38465342 -46973138 + AluSq SINE Alu 1 303 -10 1547 153 24 44 chr17 38465342 38465429 -46973051 + MER67C LTR ERV1 359 446 -264 2320 107 0 0 chr17 38465429 38465739 -46972741 + AluSx SINE Alu 1 310 -2 1547 153 24 44 chr17 38465739 38465965 -46972515 + MER67C LTR ERV1 446 669 -41 2217 107 10 0 chr17 38465965 38466275 -46972205 - AluSq SINE Alu 0 313 1 1826 155 13 0 chr17 38466832 38467135 -46971345 - AluJo SINE Alu -5 307 1 510 269 7 28 chr17 38467142 38467287 -46971193 - MIR SINE MIR -90 172 31 255 103 0 0 chr17 38467455 38467494 -46970986 + (CTG)n Simple_repeat Simple_repeat 3 41 0 235 288 113 25 chr17 38468866 38468974 -46969506 - MIR SINE MIR -54 208 111 2124 129 3 0 chr17 38468974 38469277 -46969203 + AluSx SINE Alu 1 304 -8 1981 119 7 7 chr17 38469277 38469572 -46968908 + AluSx SINE Alu 1 295 -17 235 288 113 25 chr17 38469572 38469622 -46968858 - MIR SINE MIR -150 112 35 1153 262 78 24 chr17 38471609 38471979 -46966501 + LTR16C LTR ERVL 89 478 -13 764 183 15 0 chr17 38472512 38472643 -46965837 + FLAM_A SINE Alu 1 133 0 256 319 128 7 chr17 38472978 38473119 -46965361 + L2 LINE L2 3095 3252 -20 2191 121 0 3 chr17 38473128 38473442 -46965038 + AluSq SINE Alu 1 313 0 1405 187 45 10 chr17 38473628 38473917 -46964563 + AluJo SINE Alu 1 299 -13 2504 45 10 0 chr17 38473918 38474226 -46964254 + AluY SINE Alu 1 311 0 423 206 0 0 chr17 38474241 38474254 -46964226 + GA-rich Low_complexity Low_complexity 3 15 -89 2354 93 3 0 chr17 38474254 38474566 -46963914 + AluSp SINE Alu 1 313 0 423 206 0 0 chr17 38474566 38474654 -46963826 + GA-rich Low_complexity Low_complexity 14 104 0 1837 153 6 31 chr17 38474662 38474983 -46963497 + AluSq SINE Alu 1 313 0 373 322 69 23 chr17 38475862 38476036 -46962444 - MIR SINE MIR -2 260 79 192 289 69 81 chr17 38476253 38476426 -46962054 - L2 LINE L2 -189 3083 2913 219 69 0 0 chr17 38476527 38476556 -46961924 + (CTG)n Simple_repeat Simple_repeat 3 31 0 1236 150 181 19 chr17 38477282 38477542 -46960938 + AluJo SINE Alu 1 302 0 476 58 0 14 chr17 38477558 38477627 -46960853 + (GGAA)n Simple_repeat Simple_repeat 3 70 0 2748 121 25 16 chr17 38477934 38478374 -46960106 + MLT1C LTR MaLR 24 467 0 2084 126 0 0 chr17 38478395 38478740 -46959740 + AluSx SINE Alu 1 312 0 330 250 207 6 chr17 38479194 38479360 -46959120 - MIR SINE MIR -59 203 5 21 82 0 0 chr17 38479997 38480046 -46958434 + GC_rich Low_complexity Low_complexity 1 49 0 803 206 153 5 chr17 38481502 38481711 -46956769 - MIR SINE MIR -21 241 2 438 280 70 19 chr17 38482295 38482452 -46956028 + MIR3 SINE MIR 21 185 -23 1792 117 9 66 chr17 38483537 38483687 -46954793 + AluJo SINE Alu 1 125 -187 2223 86 17 0 chr17 38483687 38483977 -46954503 + AluSp SINE Alu 1 295 -18 1792 117 9 66 chr17 38483977 38484143 -46954337 + AluJo SINE Alu 125 299 -13 2268 119 3 0 chr17 38484213 38484524 -46953956 + AluSx SINE Alu 1 312 0 243 313 0 0 chr17 38485556 38485620 -46952860 - L2 LINE L2 -2 3311 3248 226 361 83 8 chr17 38485752 38485885 -46952595 - L2 LINE L2 -5 3267 3125 186 301 91 51 chr17 38486050 38486226 -46952254 - L2 LINE L2 -208 3064 2882 423 282 64 13 chr17 38486699 38486855 -46951625 - MIR SINE MIR -48 214 51 1067 134 12 6 chr17 38486863 38487035 -46951445 + AluSc SINE Alu 83 255 -54 2376 62 16 7 chr17 38487035 38487342 -46951138 + AluY SINE Alu 1 310 -1 535 256 70 83 chr17 38488277 38488453 -46950027 + MIR SINE MIR 9 183 -79 414 0 0 0 chr17 38488453 38488499 -46949981 + (TG)n Simple_repeat Simple_repeat 2 47 0 535 256 70 83 chr17 38488499 38488564 -46949916 + MIR SINE MIR 183 247 -15 1790 94 117 8 chr17 38488564 38488830 -46949650 + AluSc SINE Alu 1 295 -14 260 257 100 0 chr17 38489513 38489583 -46948897 - L2 LINE L2 -294 2978 2902 * 523 352 78 28 chr17 38489579 38490159 -46948321 + L2 LINE L2 2365 2973 -341 279 336 172 0 chr17 38490385 38490501 -46947979 + L2 LINE L2 3117 3252 -20 208 200 0 0 chr17 38490980 38491025 -46947455 - MIR SINE MIR -75 133 89 214 191 43 0 chr17 38491050 38491097 -46947383 - L2 LINE L2 -3 3269 3221 211 301 11 43 chr17 38491167 38491260 -46947220 + L2 LINE L2 3159 3248 -24 2105 129 0 0 chr17 38491656 38491959 -46946521 + AluSx SINE Alu 1 303 -9 2430 81 0 0 chr17 38491966 38492276 -46946204 + AluY SINE Alu 2 311 0 1981 155 0 0 chr17 38492362 38492672 -46945808 - AluSg SINE Alu 0 310 1 362 326 50 7 chr17 38492737 38492878 -46945602 - L2 LINE L2 -5 3267 3121 2273 119 3 0 chr17 38493470 38493781 -46944699 + AluSx SINE Alu 1 312 0 231 302 16 0 chr17 38494813 38494876 -46943604 - L2 LINE L2 -2 3311 3248 221 349 91 8 chr17 38495008 38495140 -46943340 - L2 LINE L2 -5 3267 3125 423 282 64 13 chr17 38495952 38496108 -46942372 - MIR SINE MIR -48 214 51 1067 134 12 6 chr17 38496116 38496288 -46942192 + AluSc SINE Alu 83 255 -54 2376 62 16 7 chr17 38496288 38496595 -46941885 + AluY SINE Alu 1 310 -1 535 256 70 83 chr17 38497530 38497706 -46940774 + MIR SINE MIR 9 183 -79 414 0 0 0 chr17 38497706 38497752 -46940728 + (TG)n Simple_repeat Simple_repeat 2 47 0 535 256 70 83 chr17 38497752 38497817 -46940663 + MIR SINE MIR 183 247 -15 1790 94 117 8 chr17 38497817 38498083 -46940397 + AluSc SINE Alu 1 295 -14 260 257 100 0 chr17 38498766 38498836 -46939644 - L2 LINE L2 -294 2978 2902 * 300 344 41 44 chr17 38498832 38499152 -46939328 + L2 LINE L2 2365 2683 -631 324 206 82 10 chr17 38499464 38499561 -46938919 - MIR SINE MIR -70 138 35 2308 102 0 9 chr17 38501265 38501580 -46936900 - AluSx SINE Alu 0 312 1 2211 95 13 0 chr17 38501580 38501882 -46936598 - AluSx SINE Alu -4 308 1 321 285 88 57 chr17 38503204 38503397 -46935083 - L2 LINE L2 -5 3308 3110 2137 123 0 0 chr17 38503487 38503780 -46934700 + AluSx SINE Alu 1 293 -19 1691 110 49 4 chr17 38504189 38504435 -46934045 + AluSx SINE Alu 56 312 0 532 287 94 5 chr17 38504445 38504647 -46933833 + MIR SINE MIR 37 256 -6 2322 84 6 6 chr17 38505151 38505462 -46933018 + AluY SINE Alu 1 311 0 359 294 110 7 chr17 38505469 38505605 -46932875 + MER5A DNA MER1_type 40 189 0 207 0 0 0 chr17 38506888 38506911 -46931569 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1668 176 6 32 chr17 38506915 38507227 -46931253 + AluJo SINE Alu 1 304 -8 296 229 28 107 chr17 38507229 38507429 -46931051 + Charlie8 DNA MER1_type 148 1406 -1011 261 246 103 15 chr17 38507433 38507588 -46930892 - MER5A DNA MER1_type -11 178 58 2271 96 3 3 chr17 38509068 38509380 -46929100 - AluSp SINE Alu -1 312 1 1649 82 143 4 chr17 38509630 38509908 -46928572 - AluSg1 SINE Alu 0 313 2 461 111 56 0 chr17 38510415 38510487 -46927993 - MADE1 DNA Mariner -4 76 1 792 161 0 0 chr17 38510508 38510632 -46927848 - FLAM_C SINE Alu -19 124 1 1845 155 14 0 chr17 38510834 38511131 -46927349 + AluSx SINE Alu 1 301 -11 1710 180 0 3 chr17 38511133 38511416 -46927064 - AluJo SINE Alu -30 282 1 2767 139 82 57 chr17 38511476 38512016 -46926464 + MLT2B3 LTR ERVL 1 553 -1 314 320 88 7 chr17 38512091 38512238 -46926242 + MLT1K LTR MaLR 216 374 -214 1937 134 3 0 chr17 38512238 38512545 -46925935 - AluSx SINE Alu 0 308 1 442 241 0 48 chr17 38512555 38512691 -46925789 - MLT1A2 LTR MaLR -216 158 28 1971 151 13 0 chr17 38512691 38512990 -46925490 + AluSx SINE Alu 2 304 -8 649 127 0 17 chr17 38513010 38513128 -46925352 + (GAAA)n Simple_repeat Simple_repeat 1 116 0 719 238 111 41 chr17 38513456 38513700 -46924780 + MIR SINE MIR 2 262 0 217 205 0 0 chr17 38513758 38513797 -46924683 + CT-rich Low_complexity Low_complexity 3 41 0 222 298 0 0 chr17 38514023 38514080 -46924400 + A-rich Low_complexity Low_complexity 5 61 0 954 168 0 0 chr17 38514467 38514622 -46923858 - FRAM SINE Alu -18 158 4 2013 122 0 44 chr17 38515015 38515334 -46923146 - AluSx SINE Alu -7 305 1 673 121 40 0 chr17 38516927 38517026 -46921454 + FLAM_C SINE Alu 14 116 -27 2345 68 6 3 chr17 38517070 38517381 -46921099 - AluSp SINE Alu -1 312 1 2189 114 0 7 chr17 38517766 38518073 -46920407 - AluSx SINE Alu -7 305 1 24 0 0 0 chr17 38519415 38519439 -46919041 + AT_rich Low_complexity Low_complexity 1 24 0 2211 109 3 6 chr17 38519876 38520189 -46918291 - AluSp SINE Alu -1 312 1 2217 109 0 3 chr17 38520189 38520491 -46917989 - AluSx SINE Alu -11 301 1 1971 156 3 0 chr17 38520492 38520799 -46917681 - AluJb SINE Alu -4 308 1 762 242 16 21 chr17 38521836 38522030 -46916450 + MER106A DNA MER1_type 1 193 -43 2095 87 63 0 chr17 38522030 38522316 -46916164 + AluSc SINE Alu 1 304 -5 1818 116 98 3 chr17 38522323 38522608 -46915872 + AluSx SINE Alu 1 312 0 847 134 0 8 chr17 38522673 38522800 -46915680 + AluJb SINE Alu 1 126 -186 1269 143 4 48 chr17 38523792 38524023 -46914457 - AluJo SINE Alu -7 305 85 2156 115 3 0 chr17 38524029 38524325 -46914155 - AluSx SINE Alu -13 299 3 1831 98 0 56 chr17 38524329 38524616 -46913864 - AluSx SINE Alu -14 298 28 1659 136 32 44 chr17 38524775 38525091 -46913389 + AluJb SINE Alu 1 312 0 2114 114 0 16 chr17 38525383 38525690 -46912790 - AluSx SINE Alu -8 304 3 715 214 8 0 chr17 38525903 38526029 -46912451 - FLAM_A SINE Alu -6 127 1 191 132 0 110 chr17 38526391 38526482 -46911998 + (TCCCC)n Simple_repeat Simple_repeat 2 82 0 584 303 39 6 chr17 38526742 38526920 -46911560 + MIR3 SINE MIR 15 198 -10 1951 145 10 6 chr17 38526922 38527233 -46911247 + AluJb SINE Alu 1 312 0 1462 111 32 161 chr17 38527456 38527577 -46910903 + AluJo SINE Alu 5 140 -162 2095 148 7 0 chr17 38527577 38527887 -46910593 + AluSx SINE Alu 1 312 0 1462 111 32 161 chr17 38527887 38528107 -46910373 + AluJo SINE Alu 140 302 0 2095 176 80 84 chr17 38528591 38528665 -46909815 + MER7C DNA MER2_type 2 75 -2953 1997 140 0 16 chr17 38528665 38528972 -46909508 + AluSx SINE Alu 1 302 -10 2095 176 80 84 chr17 38528972 38529232 -46909248 + MER7C DNA MER2_type 75 335 -2693 1624 101 0 5 chr17 38529232 38529450 -46909030 - AluSq SINE Alu -91 222 6 2095 176 80 84 chr17 38529450 38529718 -46908762 + MER7C DNA MER2_type 335 602 0 2459 68 3 0 chr17 38529720 38530027 -46908453 - AluSp SINE Alu -5 308 1 1634 148 18 7 chr17 38530090 38530374 -46908106 + L1MA4 LINE L1 6013 6299 -1 1823 160 0 29 chr17 38530413 38530725 -46907755 + AluJo SINE Alu 8 310 -2 2188 102 10 0 chr17 38530782 38530793 -46907687 - AluSx SINE Alu 0 312 303 247 62 0 0 chr17 38530793 38530825 -46907655 + (TTA)n Simple_repeat Simple_repeat 2 180 0 2188 102 10 0 chr17 38530825 38531107 -46907373 - AluSx SINE Alu -9 303 1 306 0 0 0 chr17 38531379 38531413 -46907067 + (TG)n Simple_repeat Simple_repeat 2 35 0 222 91 0 0 chr17 38533934 38533967 -46904513 + (CACCC)n Simple_repeat Simple_repeat 5 37 0 1602 139 41 71 chr17 38535411 38535705 -46902775 - AluJb SINE Alu -25 287 3 1161 60 0 0 chr17 38535738 38535872 -46902608 + AluSg1 SINE Alu 1 134 -175 1800 86 74 4 chr17 38535872 38536115 -46902365 + AluSp SINE Alu 1 260 -53 266 176 0 73 chr17 38536233 38536301 -46902179 + AluYb8 SINE Alu 246 308 0 529 295 20 7 chr17 38536468 38536617 -46901863 - MIR3 SINE MIR -41 167 17 2274 112 0 16 chr17 38537255 38537569 -46900911 - AluSc SINE Alu 0 309 1 243 119 0 0 chr17 38537569 38537611 -46900869 - AluJb SINE Alu -3 298 257 1531 140 0 0 chr17 38537611 38537825 -46900655 - AluJb SINE Alu -87 225 12 1023 149 17 29 chr17 38537831 38538005 -46900475 - AluJb SINE Alu -3 309 138 2247 88 0 46 chr17 38538300 38538460 -46900020 - AluSx SINE Alu -19 293 152 2413 84 0 0 chr17 38538460 38538756 -46899724 - AluY SINE Alu -15 296 1 2247 88 0 46 chr17 38538756 38538902 -46899578 - AluSx SINE Alu -160 152 1 2254 124 0 0 chr17 38538968 38539267 -46899213 - AluSq SINE Alu -14 299 1 374 262 154 0 chr17 38539321 38539470 -46899010 - L1MC4a LINE L1 -1897 5911 5740 1976 149 0 43 chr17 38539521 38539843 -46898637 - AluJb SINE Alu -4 308 1 1965 106 74 3 chr17 38540531 38540815 -46897665 - AluSq SINE Alu -9 304 1 2150 85 53 0 chr17 38540815 38541096 -46897384 - AluSx SINE Alu -16 296 1 1646 189 7 33 chr17 38541106 38541412 -46897068 - AluJb SINE Alu -14 298 1 1514 139 0 0 chr17 38542194 38542417 -46896063 + AluJb SINE Alu 84 306 -6 515 138 224 0 chr17 38542444 38542560 -46895920 - FLAM_C SINE Alu 0 143 2 2079 141 3 31 chr17 38542695 38543015 -46895465 - AluJb SINE Alu -1 311 1 489 156 222 0 chr17 38543027 38543117 -46895363 - FLAM_C SINE Alu -19 124 15 480 156 42 0 chr17 38543178 38543274 -46895206 - L1MB8 LINE L1 -7 6171 6072 2120 166 87 80 chr17 38543358 38543656 -46894824 - MER92B LTR ERV1 -47 589 295 1861 89 0 4 chr17 38543656 38543893 -46894587 - AluSp SINE Alu -15 298 63 2120 166 87 80 chr17 38543893 38543920 -46894560 - MER92B LTR ERV1 -341 295 270 2303 101 7 0 chr17 38543920 38544216 -46894264 - AluSx SINE Alu -8 304 7 2120 166 87 80 chr17 38544216 38544474 -46894006 - MER92B LTR ERV1 -366 270 1 1614 146 42 0 chr17 38544474 38544762 -46893718 - L1MB7 LINE L1 -154 6030 5731 812 166 14 0 chr17 38544762 38544901 -46893579 - FRAM SINE Alu -15 161 21 2335 100 0 0 chr17 38544915 38545204 -46893276 - AluSg SINE Alu -21 289 1 195 386 75 4 chr17 38545245 38545499 -46892981 + L2 LINE L2 2400 2671 -643 253 393 58 13 chr17 38545533 38545757 -46892723 - L2 LINE L2 -635 2679 2446 2325 107 0 3 chr17 38545757 38546055 -46892425 + AluSx SINE Alu 1 297 -15 651 207 25 84 chr17 38546056 38546100 -46892380 + L1MC5 LINE L1 7022 7067 -911 1991 148 24 0 chr17 38546100 38546391 -46892089 + AluSq SINE Alu 1 298 -15 651 207 25 84 chr17 38546391 38546587 -46891893 + L1MC5 LINE L1 7067 7245 -733 829 123 0 0 chr17 38546660 38546774 -46891706 + AluJb SINE Alu 183 296 -16 701 246 28 5 chr17 38546774 38546985 -46891495 + L1MC5 LINE L1 7662 7877 -84 534 202 150 64 chr17 38546991 38547224 -46891256 - MER2 DNA MER2_type -3 342 90 705 43 0 0 chr17 38547224 38547317 -46891163 + (TATTG)n Simple_repeat Simple_repeat 2 94 0 2207 101 0 0 chr17 38547318 38547606 -46890874 - AluSx SINE Alu -24 288 1 253 323 42 10 chr17 38547617 38547713 -46890767 + MIR SINE MIR 149 247 -15 2199 104 7 7 chr17 38548399 38548688 -46889792 + AluSx SINE Alu 1 289 -23 2415 91 3 0 chr17 38548688 38548986 -46889494 + AluSx SINE Alu 1 299 -13 2312 119 3 0 chr17 38549143 38549455 -46889025 - AluSq SINE Alu 0 313 1 2238 98 17 3 chr17 38549502 38549799 -46888681 - AluSx SINE Alu -11 301 1 1667 214 88 35 chr17 38549825 38550371 -46888109 - L1MC4 LINE L1 -138 7904 7330 1150 207 13 9 chr17 38550375 38550559 -46887921 - AluSg/x SINE Alu -14 298 111 201 39 0 0 chr17 38550559 38550585 -46887895 + (GA)n Simple_repeat Simple_repeat 1 26 0 1150 207 13 9 chr17 38550585 38550632 -46887848 - AluSg/x SINE Alu -201 111 66 1843 138 18 4 chr17 38550632 38550907 -46887573 + AluSx SINE Alu 1 279 -33 38 22 0 0 chr17 38551038 38551083 -46887397 + AT_rich Low_complexity Low_complexity 1 45 0 562 105 0 0 chr17 38551084 38551160 -46887320 - AluJ/FLAM SINE Alu -235 77 2 2149 86 25 18 chr17 38551162 38551463 -46887017 - AluSx SINE Alu 0 303 1 1452 167 3 109 chr17 38551464 38551793 -46886687 - AluJo SINE Alu -6 296 3 372 167 17 0 chr17 38551818 38551878 -46886602 - U7 snRNA snRNA -2 61 1 2306 111 3 0 chr17 38551992 38552299 -46886181 - AluSx SINE Alu -1 311 4 746 117 23 8 chr17 38552301 38552429 -46886051 + L1MB8 LINE L1 6047 6176 -2 753 194 31 0 chr17 38552484 38552613 -46885867 - FLAM_C SINE Alu 0 133 1 255 216 103 10 chr17 38552649 38552746 -46885734 + L1MC4a LINE L1 6164 6269 -1539 1158 246 42 67 chr17 38552747 38553227 -46885253 + L1MC4a LINE L1 6397 6864 -944 479 278 37 51 chr17 38553231 38553447 -46885033 + L1ME LINE L1 472 684 -5846 863 223 0 0 chr17 38553472 38553629 -46884851 + FAM SINE Alu 1 157 -18 1886 122 107 0 chr17 38553629 38553899 -46884581 - AluSx SINE Alu -10 302 4 194 105 26 0 chr17 38553915 38553953 -46884527 + (CAA)n Simple_repeat Simple_repeat 2 40 0 364 240 107 16 chr17 38553955 38554076 -46884404 + L1ME LINE L1 719 850 -5680 1182 115 0 0 chr17 38554105 38554261 -46884219 + AluJb SINE Alu 157 312 0 906 136 0 0 chr17 38554365 38554490 -46883990 - FLAM_C SINE Alu -18 125 1 2829 169 21 4 chr17 38554490 38555018 -46883462 - L1MB8 LINE L1 -142 6036 5500 1466 140 0 35 chr17 38555046 38555122 -46883358 + AluSx SINE Alu 63 140 -164 2266 117 0 0 chr17 38555122 38555429 -46883051 + AluY SINE Alu 1 307 -4 1466 140 0 35 chr17 38555429 38555602 -46882878 + AluSx SINE Alu 140 304 0 388 90 75 0 chr17 38555604 38555671 -46882809 - L1MB8 LINE L1 -13 6165 6094 405 0 0 0 chr17 38555739 38555784 -46882696 + (TG)n Simple_repeat Simple_repeat 2 46 0 1370 119 0 0 chr17 38555791 38555968 -46882512 - AluSc SINE Alu -15 294 118 1100 231 51 27 chr17 38556020 38556174 -46882306 - AluJo SINE Alu 0 302 153 198 0 0 0 chr17 38556174 38556196 -46882284 + (TA)n Simple_repeat Simple_repeat 2 23 0 1100 231 51 27 chr17 38556196 38556336 -46882144 - AluJo SINE Alu -149 153 1 2283 95 10 3 chr17 38556348 38556642 -46881838 - AluSx SINE Alu -16 296 1 1475 156 53 34 chr17 38556642 38556962 -46881518 - L1MB4 LINE L1 -43 6137 5812 22 35 0 0 chr17 38556964 38556993 -46881487 + AT_rich Low_complexity Low_complexity 1 29 0 2098 127 3 25 chr17 38556997 38557312 -46881168 + AluSx SINE Alu 3 310 -2 642 89 0 0 chr17 38557315 38557405 -46881075 + (GA)n Simple_repeat Simple_repeat 1 90 0 2041 161 89 51 chr17 38557408 38557473 -46881007 + L1ME LINE L1 1523 1584 -4956 2437 75 3 10 chr17 38557473 38557781 -46880699 + AluY SINE Alu 1 306 -5 2041 161 89 51 chr17 38557781 38558159 -46880321 + L1ME LINE L1 1584 1946 -4594 2269 120 0 0 chr17 38558159 38558459 -46880021 + AluSx SINE Alu 1 300 -12 2041 161 89 51 chr17 38558459 38558539 -46879941 + L1ME LINE L1 1946 2021 -4519 2403 52 42 3 chr17 38558539 38558828 -46879652 + AluY SINE Alu 12 311 0 2041 161 89 51 chr17 38558828 38558872 -46879608 + L1ME LINE L1 2021 2114 -4426 1281 171 8 21 chr17 38558872 38559112 -46879368 - MLT1B LTR MaLR 0 390 154 1041 66 44 0 chr17 38559114 38559251 -46879229 + AluSp SINE Alu 1 143 -170 2072 112 0 24 chr17 38559288 38559575 -46878905 - AluSx SINE Alu -32 280 1 2341 114 0 6 chr17 38559586 38559901 -46878579 - AluSp SINE Alu 0 313 1 535 146 100 9 chr17 38559901 38560011 -46878469 - MLT1B LTR MaLR -270 120 1 7655 46 4 37 chr17 38560033 38561626 -46876854 + SVA Other Other 1 1385 -1 1785 148 27 133 chr17 38561643 38561834 -46876646 + L1ME LINE L1 2110 2320 -4220 2526 97 0 0 chr17 38561834 38562145 -46876335 + AluSx SINE Alu 1 311 -1 1785 148 27 133 chr17 38562145 38562243 -46876237 + L1ME LINE L1 2320 2427 -4113 2728 27 0 3 chr17 38562243 38562544 -46875936 + AluY SINE Alu 1 300 -11 1785 148 27 133 chr17 38562544 38562710 -46875770 + L1ME LINE L1 2427 2609 -3931 1565 172 45 35 chr17 38562710 38563000 -46875480 - AluJo SINE Alu -19 293 1 1785 148 27 133 chr17 38563000 38563068 -46875412 + L1ME LINE L1 2609 2683 -3857 2151 124 0 7 chr17 38563068 38563366 -46875114 + AluSx SINE Alu 1 296 -16 2279 84 7 17 chr17 38563368 38563654 -46874826 + AluSp SINE Alu 1 285 -28 198 0 0 0 chr17 38563654 38563676 -46874804 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 1785 148 27 133 chr17 38563686 38563735 -46874745 + L1ME LINE L1 2684 2629 -3911 2334 107 7 0 chr17 38563735 38564043 -46874437 - AluSx SINE Alu 0 312 3 1425 233 3 7 chr17 38564077 38564373 -46874107 + AluJo SINE Alu 1 295 -17 1630 144 115 15 chr17 38564375 38564645 -46873835 + AluSg1 SINE Alu 1 297 -12 257 371 48 9 chr17 38564646 38564751 -46873729 - L2 LINE L2 -20 3293 3185 2162 107 3 25 chr17 38565494 38565813 -46872667 + AluSx SINE Alu 1 312 0 1613 180 26 62 chr17 38565831 38565983 -46872497 + MLT1C LTR MaLR 59 215 -252 2278 123 7 0 chr17 38565983 38566293 -46872187 + AluSx SINE Alu 1 312 0 1613 180 26 62 chr17 38566293 38566490 -46871990 + MLT1C LTR MaLR 215 417 -50 1777 142 0 48 chr17 38566490 38566800 -46871680 - AluJb SINE Alu -17 295 1 2083 144 3 0 chr17 38566802 38567107 -46871373 - AluSq SINE Alu -7 306 1 1613 180 26 62 chr17 38567107 38567175 -46871305 + MLT1C LTR MaLR 418 465 -2 2108 125 3 7 chr17 38567484 38567781 -46870699 - AluSq SINE Alu -17 296 1 684 170 7 35 chr17 38567935 38568076 -46870404 + MIR SINE MIR 114 250 -12 418 290 47 9 chr17 38568107 38568214 -46870266 + L2 LINE L2 3141 3251 -21 232 250 17 17 chr17 38569385 38569445 -46869035 + MIR SINE MIR 88 147 -61 1938 88 81 0 chr17 38569591 38569874 -46868606 + AluSg SINE Alu 1 306 -4 2332 73 19 35 chr17 38569874 38570188 -46868292 + AluSg SINE Alu 1 309 -1 30 27 0 0 chr17 38570417 38570454 -46868026 + GC_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr17 38572960 38572981 -46865499 + AT_rich Low_complexity Low_complexity 1 21 0 1978 103 21 14 chr17 38573097 38573398 -46865082 + AluSg SINE Alu 3 310 0 1896 146 7 32 chr17 38573528 38573837 -46864643 + AluJo SINE Alu 1 301 -11 2354 105 3 6 chr17 38574010 38574323 -46864157 - AluSx SINE Alu 0 312 1 31 44 0 0 chr17 38574352 38574397 -46864083 + AT_rich Low_complexity Low_complexity 1 45 0 832 136 0 8 chr17 38574397 38574515 -46863965 - FLAM_C SINE Alu -15 118 2 1567 216 83 48 chr17 38574515 38574602 -46863878 - L1ME2 LINE L1 -32 6132 6050 2033 93 100 4 chr17 38574602 38574881 -46863599 - AluSx SINE Alu -4 308 3 1567 216 83 48 chr17 38574881 38575256 -46863224 - L1ME2 LINE L1 -114 6050 5646 2579 148 30 19 chr17 38575256 38575683 -46862797 - Tigger2a DNA MER2_type 0 434 3 1567 216 83 48 chr17 38575683 38575764 -46862716 - L1ME2 LINE L1 -518 5646 5569 207 282 0 28 chr17 38575957 38575971 -46862509 + (TATG)n Simple_repeat Simple_repeat 4 17 -55 2368 94 0 7 chr17 38575971 38576279 -46862201 - AluSg SINE Alu -4 306 1 207 282 0 28 chr17 38576279 38576335 -46862145 + (TATG)n Simple_repeat Simple_repeat 17 72 0 258 300 0 0 chr17 38576400 38576460 -46862020 + L2 LINE L2 3205 3264 -8 2146 133 0 3 chr17 38576568 38576870 -46861610 - AluSx SINE Alu -11 301 1 2206 105 3 10 chr17 38576872 38577167 -46861313 - AluSx SINE Alu -19 293 1 2328 92 3 7 chr17 38577267 38577559 -46860921 + AluSx SINE Alu 5 295 -17 2537 58 0 0 chr17 38578447 38578740 -46859740 + AluY SINE Alu 1 293 -18 587 289 112 35 chr17 38578747 38578979 -46859501 - MIR SINE MIR -6 256 7 25 51 0 0 chr17 38579432 38579471 -46859009 + AT_rich Low_complexity Low_complexity 1 39 0 3386 83 10 8 chr17 38579829 38580312 -46858168 - L1MA4A LINE L1 -12 6291 5808 234 0 0 0 chr17 38580424 38580450 -46858030 + (TTTTA)n Simple_repeat Simple_repeat 2 27 0 1608 190 0 8 chr17 38580460 38580728 -46857752 - AluSx SINE Alu -46 266 1 2282 103 0 16 chr17 38580904 38581215 -46857265 - AluSx SINE Alu -6 306 1 1776 108 4 0 chr17 38581226 38581477 -46857003 - AluSq SINE Alu -17 296 45 2126 109 0 0 chr17 38582420 38582714 -46855766 + AluSx SINE Alu 1 294 -18 2444 53 0 7 chr17 38582718 38583019 -46855461 + AluY SINE Alu 1 299 -12 1841 148 7 0 chr17 38583031 38583321 -46855159 + AluJb SINE Alu 1 292 -20 2074 133 0 0 chr17 38583631 38583932 -46854548 - AluSx SINE Alu -9 303 3 33 25 0 0 chr17 38583976 38584016 -46854464 + AT_rich Low_complexity Low_complexity 1 40 0 2292 72 0 0 chr17 38584023 38584314 -46854166 + AluSg SINE Alu 1 291 -19 668 236 81 0 chr17 38584406 38584554 -46853926 + MER5A DNA MER1_type 30 189 0 2147 99 3 3 chr17 38585586 38585880 -46852600 - AluSg SINE Alu -16 294 1 1458 86 101 0 chr17 38587003 38587212 -46851268 - MER30 DNA MER1_type 0 230 1 261 0 0 0 chr17 38588165 38588194 -46850286 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 3611 35 0 9 chr17 38589519 38589949 -46848531 + L1PA5 LINE L1 5725 6150 -4 25 0 0 0 chr17 38589949 38589974 -46848506 + AT_rich Low_complexity Low_complexity 1 25 0 1980 123 0 17 chr17 38590490 38590790 -46847690 - AluSx SINE Alu -17 295 1 1776 138 3 14 chr17 38592494 38592791 -46845689 - AluJb SINE Alu -7 305 12 1842 137 23 20 chr17 38592795 38593101 -46845379 - AluSx SINE Alu -5 307 1 814 183 0 0 chr17 38593142 38593284 -46845196 + FLAM_C SINE Alu 2 143 0 1940 138 3 0 chr17 38593431 38593720 -46844760 - AluSx SINE Alu -22 290 1 1994 157 0 0 chr17 38593720 38594026 -46844454 - AluJb SINE Alu -6 306 1 2222 106 3 0 chr17 38594194 38594496 -46843984 + AluSx SINE Alu 1 303 -9 2077 116 0 17 chr17 38594994 38595158 -46843322 - AluSx SINE Alu -15 297 139 2091 130 0 0 chr17 38595158 38595465 -46843015 - AluSx SINE Alu -5 307 1 2077 116 0 17 chr17 38595465 38595602 -46842878 - AluSx SINE Alu -173 139 1 2164 50 18 7 chr17 38595616 38595942 -46842538 - AluY SINE Alu 0 329 1 2247 105 0 3 chr17 38596423 38596736 -46841744 - AluSx SINE Alu 0 312 1 1531 140 18 36 chr17 38597108 38597429 -46841051 - AluJo SINE Alu 0 312 16 186 43 0 0 chr17 38597522 38597545 -46840935 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 2272 86 0 0 chr17 38597718 38598010 -46840470 + AluSg SINE Alu 1 292 -18 2288 77 0 10 chr17 38599033 38599346 -46839134 + AluY SINE Alu 1 310 -1 216 143 20 20 chr17 38599435 38599484 -46838996 + (CATAG)n Simple_repeat Simple_repeat 1 49 0 231 296 0 0 chr17 38599485 38599539 -46838941 - MIR SINE MIR -62 146 93 190 247 144 62 chr17 38599632 38599729 -46838751 - L2 LINE L2 -26 3246 3142 1427 174 62 10 chr17 38600053 38600322 -46838158 - AluJo SINE Alu -7 305 19 2067 108 10 7 chr17 38600322 38600618 -46837862 + AluSx SINE Alu 1 297 -15 1427 174 62 10 chr17 38600618 38600636 -46837844 - AluJo SINE Alu -293 19 3 2160 97 0 25 chr17 38600649 38600969 -46837511 - AluSq SINE Alu -1 312 1 202 284 231 50 chr17 38600976 38601539 -46836941 - L2 LINE L2 -608 2706 2042 461 215 19 0 chr17 38601929 38602036 -46836444 - L1MA10 LINE L1 -11 6323 6215 1279 175 6 117 chr17 38602288 38602613 -46835867 - AluJo SINE Alu -12 290 2 267 140 20 0 chr17 38602613 38602663 -46835817 - AluJo SINE Alu -166 136 86 807 146 7 22 chr17 38602664 38602801 -46835679 - AluJo SINE Alu -176 136 2 2240 67 0 55 chr17 38602887 38603070 -46835410 - AluY SINE Alu 0 311 152 2088 105 3 10 chr17 38603070 38603375 -46835105 - AluSq SINE Alu -10 303 1 2240 67 0 55 chr17 38603375 38603520 -46834960 - AluY SINE Alu -159 152 1 708 139 0 9 chr17 38603520 38603628 -46834852 + FLAM_C SINE Alu 27 133 -10 1955 105 0 0 chr17 38603679 38603945 -46834535 + AluSq SINE Alu 1 266 -47 2264 89 0 3 chr17 38604017 38604319 -46834161 + AluSp SINE Alu 1 301 -12 1996 133 0 7 chr17 38604326 38604619 -46833861 + AluSx SINE Alu 1 291 -21 1336 196 10 87 chr17 38605107 38605419 -46833061 + AluJo SINE Alu 2 289 -13 1806 112 35 14 chr17 38605556 38605841 -46832639 + AluSx SINE Alu 3 293 -19 875 141 8 0 chr17 38606225 38606353 -46832127 + FLAM_A SINE Alu 1 129 -4 465 148 0 12 chr17 38606357 38606438 -46832042 - MADE1 DNA Mariner 0 80 1 1781 85 125 0 chr17 38607420 38607692 -46830788 + AluSx SINE Alu 5 310 -2 1813 122 14 10 chr17 38608180 38608468 -46830012 + AluSx SINE Alu 1 289 -23 536 142 53 89 chr17 38608475 38608644 -46829836 + L1MC5 LINE L1 7384 7546 -415 1854 136 10 7 chr17 38608645 38608947 -46829533 + AluSx SINE Alu 1 303 -9 304 127 9 136 chr17 38608968 38609016 -46829464 + L1MC5 LINE L1 7611 7639 -322 2223 92 0 10 chr17 38609016 38609320 -46829160 + AluSg1 SINE Alu 1 301 -8 304 127 9 136 chr17 38609320 38609381 -46829099 + L1MC5 LINE L1 7639 7706 -255 795 60 0 35 chr17 38609382 38609498 -46828982 + AluSc SINE Alu 2 113 -196 606 125 0 0 chr17 38609496 38609584 -46828896 + Alu SINE Alu 218 305 -6 * 1539 121 59 22 chr17 38609592 38609890 -46828590 + AluSq SINE Alu 1 308 0 346 200 0 0 chr17 38609890 38609955 -46828525 + L1MC5 LINE L1 7702 7766 -195 26 30 0 0 chr17 38610138 38610171 -46828309 + AT_rich Low_complexity Low_complexity 1 33 0 2247 54 7 0 chr17 38610174 38610473 -46828007 + AluY SINE Alu 1 301 0 2198 111 0 0 chr17 38610817 38611124 -46827356 + AluSx SINE Alu 1 307 -5 2108 108 3 3 chr17 38611135 38611431 -46827049 + AluSx SINE Alu 1 296 -16 814 141 0 35 chr17 38611587 38611729 -46826751 + FLAM_C SINE Alu 3 139 -4 1756 173 3 6 chr17 38611832 38612144 -46826336 + AluJb SINE Alu 1 311 -1 2194 116 0 3 chr17 38613046 38613356 -46825124 - AluSg SINE Alu -1 309 1 2013 121 3 25 chr17 38613388 38613703 -46824777 + AluSx SINE Alu 1 308 -4 191 306 0 0 chr17 38616260 38616309 -46822171 + MER5B DNA MER1_type 3 51 -127 1989 115 3 26 chr17 38616696 38616862 -46821618 - AluSg SINE Alu -12 298 141 2055 112 0 13 chr17 38616862 38617167 -46821313 - AluSx SINE Alu -9 303 3 1989 115 3 26 chr17 38617167 38617305 -46821175 - AluSg SINE Alu -169 141 1 603 245 95 66 chr17 38617310 38617455 -46821025 - L1MC/D LINE L1 -1985 5823 5684 2022 130 0 3 chr17 38617455 38617756 -46820724 - AluSx SINE Alu -12 300 1 603 245 95 66 chr17 38617756 38617883 -46820597 - L1MC/D LINE L1 -2124 5684 5543 390 305 0 46 chr17 38617893 38618044 -46820436 - MER5A DNA MER1_type -45 144 1 306 312 109 55 chr17 38621903 38622323 -46816157 - L2 LINE L2 0 3272 2830 1656 110 4 27 chr17 38622933 38623196 -46815284 + AluSx SINE Alu 1 257 -55 392 264 125 64 chr17 38623214 38623370 -46815110 - L2 LINE L2 -1217 2097 1952 2091 84 24 7 chr17 38623370 38623657 -46814823 + AluSx SINE Alu 1 292 -20 392 264 125 64 chr17 38623657 38623795 -46814685 - L2 LINE L2 -1362 1952 1785 459 140 29 118 chr17 38626841 38626873 -46811607 + MER53 DNA DNA 3 36 -153 2280 88 0 13 chr17 38626873 38627179 -46811301 + AluSx SINE Alu 1 302 -10 459 140 29 118 chr17 38627179 38627195 -46811285 + MER53 DNA DNA 36 52 -137 2230 84 0 7 chr17 38627195 38627492 -46810988 + AluSp SINE Alu 1 295 -18 459 140 29 118 chr17 38627492 38627578 -46810902 + MER53 DNA DNA 52 126 -63 2108 96 0 10 chr17 38628694 38629010 -46809470 + AluSx SINE Alu 3 312 0 3361 180 46 40 chr17 38635151 38635553 -46802927 + L1MB8 LINE L1 4781 5179 -999 2255 71 3 10 chr17 38635553 38635850 -46802630 + AluSx SINE Alu 2 296 -16 3361 180 46 40 chr17 38635850 38636172 -46802308 + L1MB8 LINE L1 5179 5498 -680 2420 53 0 7 chr17 38636172 38636471 -46802009 + AluY SINE Alu 1 297 -14 3361 180 46 40 chr17 38636471 38636586 -46801894 + L1MB8 LINE L1 5498 5611 -567 2151 111 0 0 chr17 38636586 38636875 -46801605 + AluSg SINE Alu 1 289 -21 3361 180 46 40 chr17 38636875 38637389 -46801091 + L1MB8 LINE L1 5611 6135 -43 1154 133 0 0 chr17 38637389 38637547 -46800933 - AluSg/x SINE Alu -21 291 134 2184 95 10 0 chr17 38637547 38637841 -46800639 - AluSq SINE Alu -16 297 1 2079 107 3 7 chr17 38638116 38638447 -46800033 - AluSq SINE Alu 0 313 1 2505 61 0 0 chr17 38638475 38638785 -46799695 - AluY SINE Alu -1 310 1 1281 168 84 35 chr17 38639408 38639693 -46798787 + AluSx SINE Alu 1 299 -3 243 0 0 0 chr17 38639725 38639752 -46798728 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 1406 172 0 0 chr17 38639857 38640089 -46798391 - AluJb SINE Alu -41 271 40 1544 169 30 34 chr17 38640118 38640155 -46798325 - AluJb SINE Alu -16 296 260 3722 116 4 4 chr17 38640155 38640666 -46797814 - MER9 LTR ERVK 0 511 1 1544 169 30 34 chr17 38640666 38640924 -46797556 - AluJb SINE Alu -52 260 2 426 228 31 24 chr17 38641034 38641161 -46797319 + MIR3 SINE MIR 15 142 -66 234 150 0 0 chr17 38641161 38641201 -46797279 - MER41A LTR ERV1 0 554 515 2458 54 0 3 chr17 38641272 38641570 -46796910 + AluY SINE Alu 2 298 -13 862 154 26 0 chr17 38641583 38641662 -46796818 + MER84 LTR ERVI 7 83 -424 1662 146 54 17 chr17 38641662 38641957 -46796523 + AluSx SINE Alu 1 306 -6 862 154 26 0 chr17 38641957 38642033 -46796447 + MER84 LTR ERVI 83 166 -341 21 0 0 0 chr17 38642035 38642056 -46796424 + AT_rich Low_complexity Low_complexity 1 21 0 1081 217 0 0 chr17 38642056 38642268 -46796212 - MLT1A1 LTR MaLR -57 308 97 892 132 31 0 chr17 38642310 38642469 -46796011 + MER84 LTR ERVI 285 448 -59 456 108 14 0 chr17 38642539 38642613 -46795867 + Alu SINE Alu 231 305 -6 1210 194 4 13 chr17 38642727 38642959 -46795521 - AluJb SINE Alu -40 272 43 1628 174 31 14 chr17 38642992 38643279 -46795201 - AluJo SINE Alu -19 293 2 397 252 31 24 chr17 38643389 38643516 -46794964 + MIR3 SINE MIR 15 142 -66 249 150 0 0 chr17 38643516 38643556 -46794924 - MER41B LTR ERV1 0 635 596 381 132 44 0 chr17 38643625 38643693 -46794787 + MER84 LTR ERVI 7 77 -430 422 153 0 0 chr17 38643693 38643752 -46794728 + AluSx SINE Alu 25 83 -230 206 244 12 47 chr17 38643755 38643841 -46794639 + (CGG)n Simple_repeat Simple_repeat 3 85 0 * 218 204 0 0 chr17 38643798 38643842 -46794638 + (CAG)n Simple_repeat Simple_repeat 1 44 0 28 29 0 0 chr17 38643859 38643894 -46794586 + GC_rich Low_complexity Low_complexity 1 35 0 291 122 0 0 chr17 38643909 38643958 -46794522 + (CCG)n Simple_repeat Simple_repeat 2 50 0 2311 54 0 0 chr17 38644209 38644516 -46793964 - AluY SINE Alu 0 311 5 2511 62 0 0 chr17 38644523 38644831 -46793649 - AluY SINE Alu -3 308 1 968 142 58 0 chr17 38645934 38646089 -46792391 + AluSx SINE Alu 71 234 -76 254 228 0 0 chr17 38646093 38646150 -46792330 + MER84 LTR ERVI 74 130 -377 186 71 0 0 chr17 38646153 38646181 -46792299 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 1849 112 0 51 chr17 38646183 38646331 -46792149 - AluSx SINE Alu -33 279 152 2350 70 3 0 chr17 38646331 38646632 -46791848 - AluY SINE Alu -8 303 2 1849 112 0 51 chr17 38646632 38646777 -46791703 - AluSx SINE Alu -160 152 1 2583 125 26 2 chr17 38646780 38647237 -46791243 - MER41B LTR ERV1 -167 468 1 472 332 89 38 chr17 38647324 38647716 -46790764 + L2 LINE L2 2861 3272 0 25 105 0 0 chr17 38648028 38648123 -46790357 + GC_rich Low_complexity Low_complexity 1 95 0 30 77 0 0 chr17 38648184 38648249 -46790231 + GC_rich Low_complexity Low_complexity 1 65 0 396 306 32 16 chr17 38648470 38648594 -46789886 + MIR SINE MIR 60 185 -77 1008 73 7 0 chr17 38649407 38649543 -46788937 + AluY SINE Alu 1 137 -174 276 64 0 0 chr17 38649545 38649592 -46788888 + Alu SINE Alu 261 307 -1 357 299 145 45 chr17 38649780 38650001 -46788479 + L2 LINE L2 3030 3272 0 2273 92 3 0 chr17 38650551 38650846 -46787634 + AluSx SINE Alu 1 296 -16 563 207 27 0 chr17 38650847 38650958 -46787522 + MIR SINE MIR 31 144 -118 207 191 0 0 chr17 38651134 38651176 -46787304 + L2 LINE L2 3006 3047 -225 2088 124 0 0 chr17 38651555 38651854 -46786626 + AluSx SINE Alu 13 311 -1 1895 82 19 4 chr17 38651856 38652123 -46786357 + L1PA8 LINE L1 5902 6172 0 2392 81 0 0 chr17 38652126 38652434 -46786046 + AluY SINE Alu 1 308 -3 190 276 57 9 chr17 38652489 38652594 -46785886 - L2 LINE L2 -274 2998 2889 323 326 118 0 chr17 38653083 38653227 -46785253 + MIR SINE MIR 10 170 -92 198 0 0 0 chr17 38653537 38653559 -46784921 + (CAG)n Simple_repeat Simple_repeat 1 22 0 303 303 41 25 chr17 38653568 38653617 -46784863 + MER5A DNA MER1_type 62 109 -80 2025 112 10 7 chr17 38653617 38653778 -46784702 - AluSq SINE Alu -16 297 133 2164 114 0 3 chr17 38653778 38654075 -46784405 - AluSx SINE Alu -16 296 1 2025 112 10 7 chr17 38654075 38654209 -46784271 - AluSq SINE Alu -180 133 1 1882 163 0 0 chr17 38654213 38654501 -46783979 - AluSx SINE Alu -20 292 5 303 303 41 25 chr17 38654501 38654568 -46783912 + MER5A DNA MER1_type 111 185 -4 189 0 0 0 chr17 38656285 38656306 -46782174 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 961 166 0 12 chr17 38656306 38656453 -46782027 - AluSg/x SINE Alu -32 280 134 1981 149 0 0 chr17 38656453 38656748 -46781732 - AluSx SINE Alu -17 295 1 961 166 0 12 chr17 38656748 38656763 -46781717 - AluSg/x SINE Alu -178 134 120 1714 197 8 36 chr17 38656804 38657195 -46781285 - MER21A LTR ERV1 0 931 552 297 140 18 0 chr17 38657201 38657258 -46781222 - Alu SINE Alu -2 300 243 1374 189 29 32 chr17 38657258 38657539 -46780941 - AluJb SINE Alu -32 280 1 2249 148 57 82 chr17 38657541 38658103 -46780377 - MER21A LTR ERV1 -374 557 10 262 248 9 0 chr17 38659598 38659684 -46778796 - MIR SINE MIR -75 133 45 229 268 0 0 chr17 38659804 38659860 -46778620 + (CTGGGG)n Simple_repeat Simple_repeat 2 57 0 231 188 0 0 chr17 38660328 38660376 -46778104 + (CTGGGG)n Simple_repeat Simple_repeat 3 50 0 838 137 0 15 chr17 38660556 38660687 -46777793 + AluJo SINE Alu 1 129 -173 527 153 12 0 chr17 38660703 38660788 -46777692 + AluJo SINE Alu 195 280 -32 271 195 61 152 chr17 38660971 38661040 -46777440 + MIR SINE MIR 71 145 -117 1893 122 87 0 chr17 38661040 38661328 -46777152 - AluSp SINE Alu 0 313 1 271 195 61 152 chr17 38661328 38661422 -46777058 + MIR SINE MIR 145 219 -43 1158 294 85 26 chr17 38662383 38662887 -46775593 + L2 LINE L2 2167 2700 -614 1989 131 0 0 chr17 38662892 38663183 -46775297 + AluSp SINE Alu 5 295 -18 1786 149 31 3 chr17 38663200 38663489 -46774991 + AluSq SINE Alu 1 297 -16 558 132 0 94 chr17 38663489 38663595 -46774885 + AluJo SINE Alu 88 183 -129 805 173 0 0 chr17 38663595 38663728 -46774752 - AluJo/FLAM SINE Alu -179 133 1 2292 147 64 57 chr17 38663730 38664274 -46774206 - MER21A LTR ERV1 -374 557 10 360 305 130 6 chr17 38665722 38665899 -46772581 - MIR SINE MIR -29 233 35 269 135 19 0 chr17 38666020 38666072 -46772408 + (CTGGGG)n Simple_repeat Simple_repeat 6 58 0 213 178 0 0 chr17 38666537 38666582 -46771898 + (CTGGGG)n Simple_repeat Simple_repeat 6 50 0 594 136 5 6 chr17 38666783 38667026 -46771454 + AluJo SINE Alu 1 280 -32 306 223 68 95 chr17 38667211 38667264 -46771216 + MIR SINE MIR 76 129 -133 1988 103 72 0 chr17 38667264 38667555 -46770925 - AluSp SINE Alu -1 312 1 306 223 68 95 chr17 38667555 38667649 -46770831 + MIR SINE MIR 129 219 -43 1114 275 96 37 chr17 38668605 38669114 -46769366 + L2 LINE L2 2167 2705 -609 1884 137 17 3 chr17 38669120 38669412 -46769068 + AluSq SINE Alu 1 296 -17 2203 112 0 3 chr17 38669414 38669726 -46768754 + AluSq SINE Alu 1 311 -2 1186 193 0 5 chr17 38669743 38669956 -46768524 + AluJo SINE Alu 87 298 -14 2023 102 7 0 chr17 38669956 38670230 -46768250 + AluSx SINE Alu 1 276 -36 2210 109 7 0 chr17 38670230 38670532 -46767948 + AluSx SINE Alu 1 304 -8 355 203 0 0 chr17 38670686 38670755 -46767725 - MSTD LTR MaLR -246 150 82 1254 132 0 49 chr17 38670758 38670963 -46767517 - AluSx SINE Alu -117 195 1 318 176 37 111 chr17 38670963 38670993 -46767487 - MSTD LTR MaLR -328 100 69 1632 168 7 36 chr17 38670993 38671296 -46767184 + AluJo SINE Alu 2 295 -17 318 176 37 111 chr17 38671296 38671373 -46767107 - MSTD LTR MaLR -359 69 1 401 262 216 73 chr17 38671373 38671678 -46766802 + L2 LINE L2 2776 3155 -158 2275 91 10 3 chr17 38671678 38671986 -46766494 - AluSx SINE Alu -2 310 1 401 262 216 73 chr17 38671986 38672097 -46766383 + L2 LINE L2 3155 3249 -64 190 286 0 0 chr17 38672333 38672382 -46766098 + L2 LINE L2 3044 3092 -221 350 214 82 0 chr17 38672386 38672484 -46765996 - MER69 DNA AcHobo -11 2515 2410 2462 37 0 49 chr17 38672684 38673011 -46765469 - AluY SINE Alu 0 311 1 2081 81 7 0 chr17 38673012 38673284 -46765196 - AluSp SINE Alu -35 278 5 196 324 15 15 chr17 38673389 38673457 -46765023 + MIR SINE MIR 117 184 -78 194 373 36 9 chr17 38673522 38673632 -46764848 + MIR SINE MIR 33 145 -63 244 284 0 27 chr17 38675206 38675280 -46763200 + MER5A DNA MER1_type 87 158 -31 233 363 39 73 chr17 38678082 38678261 -46760219 + MIR SINE MIR 13 185 -77 246 364 0 0 chr17 38678277 38678365 -46760115 - L2 LINE L2 -40 3232 3145 2494 42 0 7 chr17 38679777 38680086 -46758394 + AluY SINE Alu 1 307 -4 255 186 169 0 chr17 38681438 38681497 -46756983 + L2 LINE L2 3201 3269 -3 22 0 0 0 chr17 38682234 38682256 -46756224 + AT_rich Low_complexity Low_complexity 1 22 0 2415 67 3 22 chr17 38682338 38682652 -46755828 - AluY SINE Alu -3 308 1 2188 101 38 0 chr17 38682836 38683124 -46755356 - AluSx SINE Alu -13 299 1 42 0 0 0 chr17 38684351 38684393 -46754087 + AT_rich Low_complexity Low_complexity 1 42 0 400 181 6 31 chr17 38686316 38686477 -46752003 + CT-rich Low_complexity Low_complexity 1 156 0 1974 124 0 0 chr17 38686478 38686745 -46751735 - AluSx SINE Alu -39 273 7 983 171 29 96 chr17 38686949 38687188 -46751292 + MER58A DNA MER1_type 1 223 -1 1498 98 10 5 chr17 38687501 38687706 -46750774 + AluSg/x SINE Alu 105 310 -2 409 137 11 11 chr17 38687706 38687801 -46750679 + (TA)n Simple_repeat Simple_repeat 2 96 0 243 0 0 0 chr17 38687801 38687828 -46750652 + (CA)n Simple_repeat Simple_repeat 2 28 0 2327 94 0 3 chr17 38687843 38688141 -46750339 + AluSc SINE Alu 5 301 -8 2057 147 3 10 chr17 38688152 38688452 -46750028 + AluSx SINE Alu 1 298 -14 1159 243 45 14 chr17 38688916 38689238 -46749242 - AluJb SINE Alu 0 332 2 231 188 0 0 chr17 38689428 38689476 -46749004 + (CTGGGG)n Simple_repeat Simple_repeat 3 50 0 830 137 0 15 chr17 38689656 38689787 -46748693 + AluJo SINE Alu 1 129 -173 538 123 12 0 chr17 38689807 38689888 -46748592 + AluJo SINE Alu 199 280 -32 319 180 66 150 chr17 38690068 38690140 -46748340 + MIR SINE MIR 67 119 -143 2008 115 87 0 chr17 38690140 38690428 -46748052 - AluSp SINE Alu 0 313 1 319 180 66 150 chr17 38690428 38690522 -46747958 + MIR SINE MIR 119 219 -43 1168 277 96 37 chr17 38691482 38691991 -46746489 + L2 LINE L2 2167 2705 -609 1973 137 17 3 chr17 38691997 38692289 -46746191 + AluSq SINE Alu 1 296 -17 2293 112 0 3 chr17 38692291 38692603 -46745877 + AluSq SINE Alu 1 311 -2 1223 190 0 5 chr17 38692620 38692831 -46745649 + AluJo SINE Alu 87 296 -16 2148 98 7 0 chr17 38692833 38693107 -46745373 + AluSx SINE Alu 1 276 -36 2300 109 7 0 chr17 38693107 38693409 -46745071 + AluSx SINE Alu 1 304 -8 2096 79 13 73 chr17 38693701 38694042 -46744438 + AluY SINE Alu 8 311 0 248 271 186 0 chr17 38694043 38694172 -46744308 - L2 LINE L2 -202 3070 2918 295 342 145 5 chr17 38694280 38694473 -46744007 - L2 LINE L2 -557 2757 2538 833 156 14 0 chr17 38694484 38694625 -46743855 + FLAM_C SINE Alu 1 143 0 213 284 105 84 chr17 38694660 38694899 -46743581 - L2 LINE L2 -840 2474 2231 1692 133 27 30 chr17 38696193 38696493 -46741987 + AluJo SINE Alu 1 299 -13 2447 58 10 0 chr17 38696928 38697222 -46741258 + AluY SINE Alu 1 297 -14 2284 113 3 6 chr17 38698723 38699034 -46739446 + AluSx SINE Alu 2 311 -1 1852 104 15 22 chr17 38699072 38699341 -46739139 + AluSq SINE Alu 26 292 -21 2361 111 0 0 chr17 38701776 38702074 -46736406 - AluSq SINE Alu -15 298 1 1943 133 13 32 chr17 38702500 38702808 -46735672 + AluJb SINE Alu 7 308 -4 1314 181 76 14 chr17 38706226 38706502 -46731978 - AluY SINE Alu -18 293 1 724 90 189 0 chr17 38706502 38706613 -46731867 - AluSg SINE Alu -177 133 2 2134 134 3 3 chr17 38706626 38706924 -46731556 - AluSx SINE Alu -14 298 1 773 200 0 15 chr17 38706953 38707088 -46731392 + FLAM_A SINE Alu 1 133 0 1895 163 3 3 chr17 38707406 38707700 -46730780 - AluJb SINE Alu -18 294 1 2171 119 0 10 chr17 38707885 38708178 -46730302 + AluSx SINE Alu 1 290 -22 955 188 0 24 chr17 38708188 38708353 -46730127 + FRAM SINE Alu 1 158 -18 1943 167 0 0 chr17 38708356 38708649 -46729831 + AluJb SINE Alu 1 293 -19 2226 99 0 10 chr17 38708652 38708967 -46729513 + AluSx SINE Alu 2 312 0 2202 98 7 16 chr17 38709305 38709610 -46728870 - AluSq SINE Alu -11 302 1 261 287 18 161 chr17 38710203 38710409 -46728071 + MIR SINE MIR 26 203 -5 261 299 68 43 chr17 38710500 38710617 -46727863 - MIR3 SINE MIR -25 183 64 1586 142 24 109 chr17 38710636 38710974 -46727506 + AluYb8 SINE Alu 1 309 -9 1387 205 42 7 chr17 38710985 38711292 -46727188 + L1M4 LINE L1 3567 3884 -2262 333 199 76 61 chr17 38711297 38711334 -46727146 + L1MC5 LINE L1 7561 7596 -365 2527 63 7 3 chr17 38711334 38711637 -46726843 + AluY SINE Alu 1 304 -7 333 199 76 61 chr17 38711637 38711730 -46726750 + L1MC5 LINE L1 7596 7693 -268 1593 174 14 14 chr17 38711875 38712168 -46726312 + AluJb SINE Alu 1 293 -19 2108 128 7 0 chr17 38712240 38712528 -46725952 + AluSx SINE Alu 1 290 -22 2265 71 3 30 chr17 38712528 38712825 -46725655 + AluY SINE Alu 1 289 -22 1201 83 7 0 chr17 38712987 38713131 -46725349 + AluSg/x SINE Alu 68 212 -98 184 239 162 148 chr17 38713234 38713339 -46725141 - MER5A DNA MER1_type 0 189 87 1622 154 26 51 chr17 38713339 38713650 -46724830 - AluJb SINE Alu -9 303 1 1874 149 7 7 chr17 38713654 38713949 -46724531 - AluJo SINE Alu -17 295 1 184 239 162 148 chr17 38713949 38713980 -46724500 - MER5A DNA MER1_type -104 85 46 1025 168 22 0 chr17 38714017 38714202 -46724278 - MER5A DNA MER1_type 0 189 1 577 216 54 27 chr17 38714288 38714473 -46724007 - MLT1J LTR MaLR -33 478 289 1971 138 24 10 chr17 38714508 38714805 -46723675 + AluJb SINE Alu 1 301 -11 437 163 11 0 chr17 38714805 38714897 -46723583 + GA-rich Low_complexity Low_complexity 2 94 0 241 217 121 24 chr17 38714945 38715028 -46723452 - MLT1L LTR MaLR -343 272 182 689 224 0 0 chr17 38715110 38715226 -46723254 + FLAM_A SINE Alu 1 116 -17 804 211 167 0 chr17 38715229 38715409 -46723071 - AluJo SINE Alu -17 295 86 218 240 20 0 chr17 38715504 38715554 -46722926 + MIR SINE MIR 93 143 -65 445 285 48 24 chr17 38715562 38715727 -46722753 - MER20B DNA MER1_type -18 201 32 1138 174 77 5 chr17 38715778 38715973 -46722507 - AluJo SINE Alu -18 294 86 2008 147 30 0 chr17 38715998 38716297 -46722183 - AluSx SINE Alu -4 308 1 193 321 0 0 chr17 38716308 38716364 -46722116 + L2 LINE L2 574 629 -2685 303 91 0 0 chr17 38716430 38716474 -46722006 + MADE1 DNA Mariner 1 44 -36 1956 137 33 3 chr17 38716474 38716773 -46721707 - AluSg SINE Alu -2 308 1 791 181 0 0 chr17 38716775 38716913 -46721567 - AluSg/x SINE Alu -1 309 172 831 221 72 50 chr17 38717045 38717307 -46721173 + AluJo SINE Alu 44 311 -1 2301 101 0 0 chr17 38717425 38717721 -46720759 - AluSx SINE Alu -16 296 1 299 221 31 117 chr17 38718262 38718425 -46720055 + L1 LINE L1 4181 4329 -1817 2296 92 3 0 chr17 38718425 38718717 -46719763 - AluY SINE Alu -18 293 1 31 82 0 0 chr17 38718726 38718799 -46719681 + AT_rich Low_complexity Low_complexity 1 73 0 983 202 22 36 chr17 38718801 38718975 -46719505 - AluJb SINE Alu -10 302 130 324 0 0 0 chr17 38718975 38719011 -46719469 + (TG)n Simple_repeat Simple_repeat 2 37 0 983 202 22 36 chr17 38719011 38719059 -46719421 - AluJb SINE Alu -182 130 83 1268 134 0 0 chr17 38719069 38719254 -46719226 - AluJb SINE Alu 0 304 120 648 173 18 0 chr17 38719297 38719407 -46719073 - AluJb SINE Alu -178 134 23 274 177 48 0 chr17 38719407 38719469 -46719011 - L1MB3 LINE L1 -42 6141 6077 21 0 0 0 chr17 38719489 38719510 -46718970 + AT_rich Low_complexity Low_complexity 1 21 0 1551 157 46 75 chr17 38719511 38719672 -46718808 - AluJo SINE Alu -11 301 152 2096 106 60 0 chr17 38719672 38719956 -46718524 - AluSx SINE Alu -11 301 1 1551 157 46 75 chr17 38719956 38720100 -46718380 - AluJo SINE Alu -160 152 5 604 195 9 0 chr17 38720160 38720273 -46718207 + FLAM_C SINE Alu 1 114 -19 189 132 0 0 chr17 38720407 38720445 -46718035 + (TAAAAA)n Simple_repeat Simple_repeat 3 40 0 806 98 8 23 chr17 38720445 38720577 -46717903 - MER2 DNA MER2_type -135 210 81 1963 136 17 0 chr17 38720578 38720873 -46717607 - AluSx SINE Alu 0 312 13 377 233 67 0 chr17 38720892 38720982 -46717498 - MER2 DNA MER2_type -249 96 1 2331 104 7 0 chr17 38722657 38722955 -46715525 + AluSx SINE Alu 1 300 -12 947 171 18 18 chr17 38722960 38723130 -46715350 + AluJb SINE Alu 130 299 -13 256 154 0 0 chr17 38723200 38723239 -46715241 - MER81 DNA DNA -75 39 1 307 304 73 13 chr17 38723511 38723665 -46714815 - MIR SINE MIR -64 144 8 1192 123 0 0 chr17 38723717 38723880 -46714600 - AluSg/x SINE Alu -10 302 140 912 244 94 74 chr17 38724190 38724415 -46714065 + MLT1L LTR MaLR 135 354 -261 2648 172 49 31 chr17 38724415 38724926 -46713554 - MLT2B1 LTR ERVL 0 520 1 912 244 94 74 chr17 38724926 38725014 -46713466 + MLT1L LTR MaLR 354 439 -176 1984 151 3 35 chr17 38725014 38725331 -46713149 + AluJb SINE Alu 1 307 -5 912 244 94 74 chr17 38725331 38725474 -46713006 + MLT1L LTR MaLR 439 601 -14 1348 96 0 17 chr17 38725593 38725771 -46712709 + AluSq SINE Alu 137 311 -2 2223 119 3 0 chr17 38725771 38726066 -46712414 + AluSx SINE Alu 1 296 -16 585 194 48 13 chr17 38726083 38726277 -46712203 + LTR54 LTR ERV1 167 397 -113 2178 93 11 0 chr17 38727331 38727637 -46710843 + AluSp SINE Alu 1 309 0 285 170 0 0 chr17 38727642 38727695 -46710785 + L1PA16 LINE L1 6114 6166 0 2457 86 0 16 chr17 38727729 38728042 -46710438 + AluY SINE Alu 1 308 -3 2481 66 3 0 chr17 38728165 38728468 -46710012 + AluY SINE Alu 1 304 -7 213 292 83 31 chr17 38728894 38728990 -46709490 + L2 LINE L2 3168 3268 -4 2218 130 3 0 chr17 38729521 38729820 -46708660 + AluSx SINE Alu 1 300 -12 2100 143 0 3 chr17 38729862 38730170 -46708310 + AluSx SINE Alu 4 310 -2 1825 185 3 0 chr17 38730249 38730546 -46707934 + AluJo SINE Alu 1 298 -14 386 263 151 18 chr17 38730571 38730856 -46707624 + L1MC5 LINE L1 7605 7927 -34 803 229 46 11 chr17 38730960 38731135 -46707345 + AluJo SINE Alu 113 293 -19 2229 120 0 3 chr17 38731141 38731441 -46707039 + AluSx SINE Alu 1 299 -13 1664 67 5 0 chr17 38731447 38731656 -46706824 + AluY SINE Alu 10 219 -92 1561 154 26 51 chr17 38731858 38732169 -46706311 - AluJb SINE Alu -9 303 1 1215 173 5 9 chr17 38732173 38732387 -46706093 - AluJb SINE Alu -17 295 83 2083 135 3 3 chr17 38732582 38732885 -46705595 + AluSx SINE Alu 1 303 -9 434 249 28 28 chr17 38732886 38733063 -46705417 - L1MB7 LINE L1 -13 6171 5995 537 363 71 8 chr17 38733077 38733207 -46705273 - L1ME LINE L1 -516 5605 5485 1775 152 10 24 chr17 38733207 38733503 -46704977 + AluJb SINE Alu 1 292 -20 537 363 71 8 chr17 38733503 38733612 -46704868 - L1ME LINE L1 -636 5485 5351 2565 40 0 0 chr17 38734243 38734547 -46703933 + AluY SINE Alu 1 304 -7 22 0 0 0 chr17 38734693 38734715 -46703765 + AT_rich Low_complexity Low_complexity 1 22 0 1606 181 0 44 chr17 38734940 38735261 -46703219 + AluJo SINE Alu 6 312 0 2236 106 7 0 chr17 38736258 38736561 -46701919 + AluSx SINE Alu 1 305 -7 1923 74 0 16 chr17 38736918 38737176 -46701304 + AluY SINE Alu 56 309 -2 1850 126 14 10 chr17 38737267 38737561 -46700919 + AluSq SINE Alu 7 301 -12 1972 160 0 3 chr17 38737768 38738074 -46700406 + AluJb SINE Alu 1 305 -7 2289 98 0 3 chr17 38738074 38738380 -46700100 + AluSp SINE Alu 1 305 -8 353 187 40 0 chr17 38741313 38741388 -46697092 - MIR SINE MIR -32 230 153 601 253 50 50 chr17 38741388 38741509 -46696971 + MER46C DNA MER2_type 1 121 -217 2293 93 0 6 chr17 38741509 38741821 -46696659 - AluSg SINE Alu 0 310 1 601 253 50 50 chr17 38741821 38741996 -46696484 + MER46C DNA MER2_type 120 297 -41 1117 103 0 0 chr17 38742096 38742251 -46696229 + AluSg/x SINE Alu 137 291 -21 256 313 0 0 chr17 38742252 38742319 -46696161 - MIR SINE MIR -194 68 2 1444 172 111 14 chr17 38743554 38743833 -46694647 + AluJb SINE Alu 1 306 -6 1057 117 0 49 chr17 38746263 38746426 -46692054 - AluJb SINE Alu -12 300 146 236 157 0 59 chr17 38746562 38746613 -46691867 - MIR SINE MIR -62 200 153 1507 96 5 5 chr17 38746614 38746823 -46691657 - AluY SINE Alu -17 294 86 1842 132 4 4 chr17 38746923 38747203 -46691277 + AluSx SINE Alu 26 305 -7 984 150 6 42 chr17 38747203 38747370 -46691110 + AluJb SINE Alu 134 294 -18 364 241 38 0 chr17 38747431 38747510 -46690970 - MIR SINE MIR 0 262 181 2038 89 46 40 chr17 38747684 38747857 -46690623 - AluSp SINE Alu -7 306 129 2420 43 7 3 chr17 38747857 38748156 -46690324 - AluY SINE Alu -11 300 1 2038 89 46 40 chr17 38748156 38748286 -46690194 - AluSp SINE Alu -184 129 1 2211 96 3 0 chr17 38748505 38748797 -46689683 - AluSq SINE Alu -20 293 1 2144 96 7 3 chr17 38748799 38749092 -46689388 - AluSx SINE Alu -18 294 1 761 164 0 8 chr17 38749094 38749228 -46689252 - FLAM_A SINE Alu 0 133 1 341 311 35 23 chr17 38749845 38750085 -46688395 + L1 LINE L1 4895 5137 -1009 672 106 0 106 chr17 38750087 38750164 -46688316 + AluJo/FLAM SINE Alu 1 60 -242 1225 149 128 43 chr17 38750164 38750445 -46688035 - AluJo SINE Alu -5 307 3 672 106 0 106 chr17 38750445 38750499 -46687981 + AluJo/FLAM SINE Alu 60 118 -184 831 126 197 0 chr17 38750518 38750701 -46687779 + MER21A LTR ERV1 1 219 -712 * 2653 161 57 35 chr17 38750700 38750876 -46687604 + MER21A LTR ERV1 373 544 -387 1905 134 7 7 chr17 38750876 38751175 -46687305 - AluSx SINE Alu -13 299 1 2653 161 57 35 chr17 38751175 38751545 -46686935 + MER21A LTR ERV1 544 931 0 4108 156 45 3 chr17 38751545 38752296 -46686184 + MER21A-int LTR ERV1 1 783 -3408 2220 103 0 0 chr17 38752296 38752588 -46685892 + AluSx SINE Alu 1 292 -20 591 156 11 0 chr17 38752588 38752678 -46685802 + AluJo/F(R)AM SINE Alu 134 224 -88 2028 104 45 0 chr17 38752692 38752981 -46685499 + AluSg SINE Alu 1 302 -8 2031 81 70 7 chr17 38752981 38753266 -46685214 + AluSp SINE Alu 1 303 -10 1988 123 3 17 chr17 38753283 38753584 -46684896 + AluSx SINE Alu 1 297 -15 1153 151 38 30 chr17 38753584 38753980 -46684500 - LTR54 LTR ERV1 -38 472 2 3091 133 94 24 chr17 38753981 38754558 -46683922 + L1MB3 LINE L1 5522 6146 -37 1876 122 7 43 chr17 38754558 38754862 -46683618 + AluJo SINE Alu 1 293 -19 3091 133 94 24 chr17 38754862 38754902 -46683578 + L1MB3 LINE L1 6146 6182 -1 204 209 0 23 chr17 38755021 38755064 -46683416 + C-rich Low_complexity Low_complexity 1 42 0 2429 197 32 38 chr17 38757242 38757842 -46680638 + MER21B LTR ERV1 98 693 -170 231 161 32 32 chr17 38757842 38757904 -46680576 - Tigger5 DNA MER2_type 0 2323 2262 1800 176 3 0 chr17 38757905 38758201 -46680279 + AluJo SINE Alu 1 297 -15 2025 124 0 7 chr17 38758206 38758504 -46679976 + AluSx SINE Alu 1 296 -16 229 200 0 0 chr17 38758551 38758593 -46679887 - Tigger5 DNA MER2_type -2268 55 14 331 233 0 0 chr17 38758593 38758666 -46679814 - Tigger5 DNA MER2_type 0 2323 2251 262 200 0 0 chr17 38758635 38758690 -46679790 - Tigger5 DNA MER2_type -2268 55 1 * 483 233 17 8 chr17 38758690 38758809 -46679671 + MER21B LTR ERV1 692 811 -52 1851 157 7 16 chr17 38759410 38759546 -46678934 + AluSx SINE Alu 1 137 -175 2185 108 3 0 chr17 38759546 38759842 -46678638 + AluSx SINE Alu 1 297 -15 1851 157 7 16 chr17 38759842 38760010 -46678470 + AluSx SINE Alu 137 302 -10 1092 163 0 0 chr17 38760010 38760176 -46678304 + AluJb SINE Alu 134 299 -13 410 270 54 20 chr17 38760513 38760661 -46677819 + L2 LINE L2 3154 3306 -7 248 70 23 0 chr17 38760726 38760769 -46677711 + (TA)n Simple_repeat Simple_repeat 1 44 0 688 175 83 0 chr17 38760777 38760897 -46677583 - FLAM_C SINE Alu -12 131 2 2289 67 0 0 chr17 38760902 38761230 -46677250 - AluY SINE Alu 0 328 1 355 267 340 31 chr17 38764289 38764342 -46674138 + L2 LINE L2 2804 2839 -474 2455 57 0 0 chr17 38764342 38764640 -46673840 - AluY SINE Alu -13 298 1 355 267 340 31 chr17 38764640 38764695 -46673785 + L2 LINE L2 2839 2876 -437 2029 81 48 0 chr17 38764695 38764994 -46673486 - AluSc SINE Alu 0 309 1 355 267 340 31 chr17 38764994 38765266 -46673214 + L2 LINE L2 2876 3303 -10 31 26 0 0 chr17 38765981 38766019 -46672461 + GC_rich Low_complexity Low_complexity 1 38 0 213 239 11 34 chr17 38766063 38766151 -46672329 + (CGGGG)n Simple_repeat Simple_repeat 1 86 0 232 265 69 59 chr17 38767696 38767798 -46670682 + MER91A DNA MER1_type 74 176 -20 22 0 0 0 chr17 38768190 38768212 -46670268 + GC_rich Low_complexity Low_complexity 1 22 0 302 235 29 69 chr17 38768594 38768696 -46669784 + MIR SINE MIR 21 118 -90 722 243 20 7 chr17 38770546 38770698 -46667782 + MIR3 SINE MIR 3 156 -52 215 61 30 0 chr17 38770977 38771010 -46667470 + (CCCCCT)n Simple_repeat Simple_repeat 1 34 0 24 53 0 0 chr17 38771442 38771480 -46667000 + GC_rich Low_complexity Low_complexity 1 38 0 212 250 0 18 chr17 38772529 38772585 -46665895 + GA-rich Low_complexity Low_complexity 2 56 0 24 0 0 0 chr17 38772830 38772854 -46665626 + GC_rich Low_complexity Low_complexity 1 24 0 26 50 0 0 chr17 38772910 38772950 -46665530 + GC_rich Low_complexity Low_complexity 1 40 0 1970 135 0 16 chr17 38773471 38773774 -46664706 - AluJo SINE Alu -14 298 1 37 23 0 0 chr17 38773991 38774035 -46664445 + GC_rich Low_complexity Low_complexity 1 44 0 242 132 19 0 chr17 38774220 38774273 -46664207 + (CGGGG)n Simple_repeat Simple_repeat 5 58 0 416 340 86 50 chr17 38774491 38774770 -46663710 - L3b LINE CR1 -101 1482 1194 417 236 42 116 chr17 38774805 38775021 -46663459 - L3 LINE CR1 -14 1563 1364 22 56 0 0 chr17 38775184 38775220 -46663260 + GC_rich Low_complexity Low_complexity 1 36 0 24 32 0 0 chr17 38775490 38775521 -46662959 + GC_rich Low_complexity Low_complexity 1 31 0 380 293 0 53 chr17 38776689 38776822 -46661658 + MIR SINE MIR 59 184 -78 2270 64 4 0 chr17 38776886 38777200 -46661280 - AluSx SINE Alu 0 315 1 423 162 19 9 chr17 38777893 38777998 -46660482 + GA-rich Low_complexity Low_complexity 2 107 0 332 309 0 10 chr17 38778046 38778143 -46660337 + MIR SINE MIR 74 169 -93 245 152 20 19 chr17 38778445 38778557 -46659923 + GA-rich Low_complexity Low_complexity 1 112 0 251 293 0 38 chr17 38778966 38779072 -46659408 + (CTGGGG)n Simple_repeat Simple_repeat 1 102 0 214 361 0 22 chr17 38779017 38779197 -46659283 + (TTGGGG)n Simple_repeat Simple_repeat 5 180 0 * 331 300 11 22 chr17 38779148 38779328 -46659152 + (CTGGGG)n Simple_repeat Simple_repeat 1 178 0 206 306 28 21 chr17 38779277 38779421 -46659059 + (TTGGGG)n Simple_repeat Simple_repeat 2 146 0 * 201 328 172 5 chr17 38780325 38780529 -46657951 - L2 LINE L2 -216 3056 2819 2321 76 3 7 chr17 38780529 38780833 -46657647 + AluSg SINE Alu 1 303 -7 375 262 82 12 chr17 38781444 38781570 -46656910 + MIR SINE MIR 5 140 -68 749 155 0 23 chr17 38782142 38782271 -46656209 + FLAM_C SINE Alu 1 126 -7 288 0 0 0 chr17 38782356 38782388 -46656092 + (T)n Simple_repeat Simple_repeat 1 32 0 186 330 75 21 chr17 38782535 38782629 -46655851 - MIR SINE MIR -57 151 53 2133 78 0 0 chr17 38783071 38783328 -46655152 - AluY SINE Alu -54 257 1 467 189 11 0 chr17 38783329 38783419 -46655061 - AluJb SINE Alu -99 213 123 1956 158 6 3 chr17 38783432 38783743 -46654737 - AluSx SINE Alu 0 312 1 2390 116 3 0 chr17 38784174 38784485 -46653995 + AluSx SINE Alu 1 312 0 651 128 0 0 chr17 38784485 38784594 -46653886 + (GA)n Simple_repeat Simple_repeat 1 109 0 1870 99 128 7 chr17 38784824 38785097 -46653383 + AluSg SINE Alu 2 307 -3 1015 136 0 0 chr17 38785097 38785237 -46653243 + AluSg/x SINE Alu 137 276 -36 192 40 0 0 chr17 38785238 38785263 -46653217 + (CAAA)n Simple_repeat Simple_repeat 1 25 0 240 35 0 0 chr17 38785318 38785347 -46653133 + (TC)n Simple_repeat Simple_repeat 2 30 0 387 0 0 0 chr17 38785349 38785392 -46653088 + (CA)n Simple_repeat Simple_repeat 1 43 0 238 32 0 0 chr17 38785702 38785733 -46652747 - AluY SINE Alu -271 31 1 1769 184 0 16 chr17 38785766 38786075 -46652405 + AluJb SINE Alu 1 304 -8 2561 66 0 0 chr17 38786342 38786645 -46651835 + AluY SINE Alu 1 303 -8 2451 67 3 22 chr17 38786853 38787168 -46651312 - AluSc SINE Alu 0 309 1 695 114 23 68 chr17 38787168 38787300 -46651180 - AluSg SINE Alu -180 130 5 1106 121 24 18 chr17 38787306 38787472 -46651008 - AluSg/x SINE Alu -17 295 129 861 93 0 50 chr17 38787556 38787695 -46650785 - AluSg/x SINE Alu 0 312 181 599 173 8 30 chr17 38787697 38787830 -46650650 + AluJb SINE Alu 181 310 -2 391 150 17 0 chr17 38787989 38788049 -46650431 + AluSx SINE Alu 2 62 -239 1864 119 0 0 chr17 38788149 38788392 -46650088 + AluSx SINE Alu 57 299 -13 289 328 145 28 chr17 38788545 38789076 -46649404 + L2 LINE L2 1057 1649 -1665 611 209 78 114 chr17 38789137 38789190 -46649290 - Charlie4a DNA MER1_type -1453 508 455 1999 91 80 11 chr17 38789190 38789477 -46649003 - AluSx SINE Alu -3 309 3 611 209 78 114 chr17 38789477 38789669 -46648811 - Charlie4a DNA MER1_type -1506 455 274 1945 135 7 43 chr17 38789669 38789973 -46648507 - AluJo SINE Alu -18 294 2 611 209 78 114 chr17 38789973 38790033 -46648447 - Charlie4a DNA MER1_type -1687 274 213 2223 119 10 0 chr17 38790479 38790781 -46647699 - AluSx SINE Alu -7 305 1 2059 167 0 0 chr17 38790820 38791119 -46647361 - AluJb SINE Alu -13 299 1 282 141 0 18 chr17 38791255 38791319 -46647161 + MIR SINE MIR 74 137 -71 * 323 296 0 11 chr17 38791312 38791400 -46647080 - L2 LINE L2 0 3272 3186 2348 113 3 0 chr17 38791950 38792260 -46646220 - AluSq SINE Alu -2 311 1 803 178 0 0 chr17 38792297 38792415 -46646065 - AluJb SINE Alu -194 118 1 1670 162 33 39 chr17 38792649 38792982 -46645498 + MER21B LTR ERV1 363 693 -170 258 161 32 32 chr17 38792982 38793044 -46645436 - Tigger5 DNA MER2_type 0 2323 2262 1906 172 3 0 chr17 38793045 38793341 -46645139 + AluJo SINE Alu 1 297 -15 2225 122 0 0 chr17 38793346 38793642 -46644838 + AluSx SINE Alu 1 296 -16 250 200 0 0 chr17 38793689 38793731 -46644749 - Tigger5 DNA MER2_type -2268 55 14 361 233 0 0 chr17 38793731 38793804 -46644676 - Tigger5 DNA MER2_type 0 2323 2251 528 225 17 8 chr17 38793827 38793947 -46644533 + MER21B LTR ERV1 691 811 -52 1944 157 7 16 chr17 38794548 38794684 -46643796 + AluSx SINE Alu 1 137 -175 2290 108 3 0 chr17 38794684 38794980 -46643500 + AluSx SINE Alu 1 297 -15 1944 157 7 16 chr17 38794980 38795149 -46643331 + AluSx SINE Alu 137 303 -9 1140 163 0 0 chr17 38795149 38795315 -46643165 + AluJb SINE Alu 134 299 -13 288 0 0 0 chr17 38795656 38795688 -46642792 + (T)n Simple_repeat Simple_repeat 1 32 0 255 366 67 0 chr17 38795800 38795934 -46642546 - MIR SINE MIR -74 188 46 347 316 17 8 chr17 38796442 38796559 -46641921 - MIR3 SINE MIR -49 159 42 2262 113 3 0 chr17 38798933 38799234 -46639246 - AluSx SINE Alu -10 302 1 1255 79 0 67 chr17 38799559 38799737 -46638743 + AluSg/x SINE Alu 134 299 -11 302 331 77 24 chr17 38801292 38801461 -46637019 + MIR3 SINE MIR 25 202 -6 2559 58 0 10 chr17 38802144 38802453 -46636027 - AluY SINE Alu -5 306 1 1615 129 7 61 chr17 38802970 38803061 -46635419 + AluJo SINE Alu 37 131 -181 2312 103 14 0 chr17 38803061 38803353 -46635127 - AluSg SINE Alu -14 296 1 2378 105 0 0 chr17 38803360 38803665 -46634815 - AluSq SINE Alu -7 306 2 1615 129 7 61 chr17 38803665 38803844 -46634636 + AluJo SINE Alu 137 300 -12 1924 128 0 11 chr17 38804176 38804442 -46634038 - AluSx SINE Alu -49 263 1 476 222 60 0 chr17 38804445 38804562 -46633918 + MIR3 SINE MIR 82 205 -3 190 289 0 0 chr17 38805464 38805509 -46632971 - MIR SINE MIR -56 206 162 2412 89 3 0 chr17 38805519 38805812 -46632668 - AluSp SINE Alu -15 298 5 992 94 0 8 chr17 38805989 38806117 -46632363 + AluSg/x SINE Alu 167 293 -19 868 168 0 0 chr17 38806191 38806316 -46632164 + FLAM_C SINE Alu 1 125 -18 47 0 0 0 chr17 38806316 38806363 -46632117 + AT_rich Low_complexity Low_complexity 1 47 0 180 0 0 0 chr17 38806546 38806566 -46631914 + (CCCCCT)n Simple_repeat Simple_repeat 3 22 0 23 0 0 0 chr17 38807505 38807528 -46630952 + AT_rich Low_complexity Low_complexity 1 23 0 324 0 0 0 chr17 38807743 38807779 -46630701 + (TG)n Simple_repeat Simple_repeat 1 36 0 321 26 0 0 chr17 38807828 38807866 -46630614 + (TG)n Simple_repeat Simple_repeat 2 39 0 330 87 0 0 chr17 38808105 38808151 -46630329 + (CCCCAG)n Simple_repeat Simple_repeat 5 50 0 23 33 0 0 chr17 38809066 38809096 -46629384 + AT_rich Low_complexity Low_complexity 1 30 0 210 37 0 0 chr17 38809110 38809137 -46629343 + (CTGTG)n Simple_repeat Simple_repeat 5 31 0 2195 112 0 11 chr17 38812464 38812775 -46625705 - AluSx SINE Alu 0 308 1 2323 93 0 29 chr17 38813554 38813865 -46624615 + AluSx SINE Alu 1 302 -10 2294 108 7 0 chr17 38814820 38815115 -46623365 - AluSg SINE Alu -13 297 1 1660 163 13 35 chr17 38815700 38816013 -46622467 + AluJb SINE Alu 1 306 -6 2016 136 10 7 chr17 38816562 38816857 -46621623 - AluSx SINE Alu -16 296 1 878 113 73 0 chr17 38816857 38816981 -46621499 - AluSq/x SINE Alu -176 136 4 2516 81 0 0 chr17 38817671 38817967 -46620513 + AluSx SINE Alu 1 296 -16 180 0 0 0 chr17 38819600 38819620 -46618860 + (CAGGA)n Simple_repeat Simple_repeat 1 20 0 1549 198 30 0 chr17 38819918 38820221 -46618259 - AluJo SINE Alu 0 312 1 1809 103 0 36 chr17 38820405 38820490 -46617990 + AluSx SINE Alu 54 140 -172 2457 86 3 0 chr17 38820490 38820792 -46617688 + AluSx SINE Alu 1 303 -9 1809 103 0 36 chr17 38820792 38820959 -46617521 + AluSx SINE Alu 140 297 -15 961 183 0 6 chr17 38820959 38821128 -46617352 + FRAM SINE Alu 1 165 -11 249 57 0 0 chr17 38821188 38821223 -46617257 + (CAG)n Simple_repeat Simple_repeat 2 36 0 1077 104 0 0 chr17 38821919 38822054 -46616426 + AluJo SINE Alu 1 135 -177 2478 81 3 0 chr17 38822054 38822362 -46616118 + AluSq SINE Alu 1 309 -4 1055 151 42 0 chr17 38822896 38823062 -46615418 - FRAM SINE Alu -7 169 1 323 303 30 23 chr17 38823177 38823309 -46615171 - MIR3 SINE MIR -70 138 6 394 300 5 43 chr17 38823357 38823567 -46614913 + MARNA DNA Mariner 162 363 -223 353 240 43 94 chr17 38824162 38824509 -46613971 + L1MCa LINE L1 1906 2215 -4211 252 81 81 0 chr17 38824509 38824583 -46613897 + (TA)n Simple_repeat Simple_repeat 1 80 0 1544 151 107 0 chr17 38824583 38824835 -46613645 - AluJb SINE Alu -23 289 11 502 241 166 76 chr17 38824861 38825066 -46613414 + L1MC4 LINE L1 7311 7496 -546 2252 104 10 3 chr17 38825066 38825364 -46613116 + AluSp SINE Alu 1 300 -13 502 241 166 76 chr17 38825364 38825410 -46613070 + L1MC4 LINE L1 7496 7536 -506 192 40 0 0 chr17 38825410 38825435 -46613045 + (CAAAA)n Simple_repeat Simple_repeat 3 27 0 502 241 166 76 chr17 38825435 38825703 -46612777 + L1MC4 LINE L1 7536 7978 -64 2019 135 0 32 chr17 38827923 38828235 -46610245 + AluSx SINE Alu 11 312 0 304 310 60 60 chr17 38828345 38828529 -46609951 + L1ME4a LINE L1 5769 5952 -169 2178 84 34 0 chr17 38829116 38829413 -46609067 - AluSp SINE Alu -6 307 1 216 97 0 0 chr17 38830143 38830174 -46608306 + (GAAA)n Simple_repeat Simple_repeat 2 32 0 1863 173 0 22 chr17 38830190 38830332 -46608148 + AluJo SINE Alu 1 145 -167 2447 67 10 3 chr17 38830332 38830632 -46607848 + AluY SINE Alu 1 302 -9 1863 173 0 22 chr17 38830632 38830729 -46607751 + AluJo SINE Alu 145 305 -7 467 139 0 0 chr17 38830729 38830801 -46607679 + Alu SINE Alu 234 305 -7 2402 112 0 0 chr17 38830804 38831109 -46607371 + AluSq SINE Alu 1 305 -8 2397 72 3 3 chr17 38831557 38831849 -46606631 + AluSc SINE Alu 1 292 -17 1993 123 50 13 chr17 38832965 38833266 -46605214 + AluSx SINE Alu 1 312 0 23 0 0 0 chr17 38833297 38833320 -46605160 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr17 38833328 38833349 -46605131 + AT_rich Low_complexity Low_complexity 1 21 0 2432 91 0 0 chr17 38833349 38833647 -46604833 + AluSc SINE Alu 1 298 -11 938 135 0 0 chr17 38833797 38833930 -46604550 - FLAM_C SINE Alu 0 133 1 2374 104 0 0 chr17 38834229 38834528 -46603952 - AluSx SINE Alu -13 299 1 1050 119 83 67 chr17 38834539 38834732 -46603748 - AluJo SINE Alu 0 312 117 516 198 0 0 chr17 38834753 38834844 -46603636 + FRAM SINE Alu 69 159 -17 2242 110 0 7 chr17 38834868 38835167 -46603313 - AluSq SINE Alu -16 297 1 2118 157 0 0 chr17 38835191 38835503 -46602977 - AluSx SINE Alu 0 312 1 1390 199 50 17 chr17 38835594 38835891 -46602589 - AluJo SINE Alu 0 312 6 28 22 0 22 chr17 38836143 38836174 -46602306 + AT_rich Low_complexity Low_complexity 1 32 -13 2190 122 0 10 chr17 38836174 38836470 -46602010 - AluSx SINE Alu -19 293 1 28 22 0 22 chr17 38836470 38836484 -46601996 + AT_rich Low_complexity Low_complexity 32 45 0 2525 61 0 3 chr17 38836607 38836904 -46601576 + AluY SINE Alu 1 296 -15 1824 167 0 0 chr17 38837280 38837591 -46600889 + AluJb SINE Alu 9 319 0 2228 113 0 32 chr17 38837596 38837905 -46600575 + AluSx SINE Alu 3 301 -11 2360 108 0 0 chr17 38837907 38838213 -46600267 + AluSg SINE Alu 3 308 -2 1032 137 0 71 chr17 38838669 38838682 -46599798 + AluSg/x SINE Alu 120 132 -178 216 0 0 0 chr17 38838682 38838706 -46599774 + (TTAAA)n Simple_repeat Simple_repeat 2 25 0 1032 137 0 71 chr17 38838706 38838789 -46599691 + AluSg/x SINE Alu 132 198 -112 2398 83 3 0 chr17 38838789 38839090 -46599390 + AluY SINE Alu 1 302 -9 1032 137 0 71 chr17 38839090 38839189 -46599291 + AluSg/x SINE Alu 198 302 -8 649 110 0 0 chr17 38839191 38839282 -46599198 + AluSg/x SINE Alu 206 296 -14 2413 100 0 0 chr17 38839719 38840020 -46598460 - AluSx SINE Alu -11 301 1 2139 137 3 13 chr17 38840713 38841019 -46597461 + AluJb SINE Alu 1 303 -9 263 315 90 0 chr17 38841280 38841369 -46597111 - L2 LINE L2 -1 3271 3175 1301 147 11 0 chr17 38841385 38841575 -46596905 - AluJb SINE Alu -120 192 1 286 321 69 8 chr17 38841854 38841985 -46596495 + L2 LINE L2 2139 2277 -1037 713 189 33 50 chr17 38842048 38842184 -46596296 + MER5B DNA MER1_type 1 135 -43 2351 74 3 17 chr17 38842184 38842480 -46596000 + AluSp SINE Alu 1 292 -21 713 189 33 50 chr17 38842480 38842523 -46595957 + MER5B DNA MER1_type 135 177 -1 251 330 90 47 chr17 38842638 38842871 -46595609 + MIR SINE MIR 20 262 0 2330 168 70 71 chr17 38842898 38843271 -46595209 - L1MC4a LINE L1 0 7808 7436 2050 118 20 0 chr17 38843271 38843567 -46594913 + AluSq SINE Alu 1 302 -11 2330 168 70 71 chr17 38843567 38843675 -46594805 - L1MC4a LINE L1 -372 7436 7329 816 164 0 16 chr17 38843675 38843803 -46594677 + FLAM_C SINE Alu 2 127 -6 2077 112 0 59 chr17 38843807 38844129 -46594351 + AluSx SINE Alu 1 303 -9 2330 168 70 71 chr17 38844129 38844260 -46594220 - L1MC4a LINE L1 -482 7326 7191 22 70 0 0 chr17 38844659 38844702 -46593778 + GC_rich Low_complexity Low_complexity 1 43 0 544 188 215 0 chr17 38845213 38845357 -46593123 + MER96 DNA MER1_type? 1 175 0 1763 163 20 10 chr17 38845987 38846282 -46592198 + AluJo SINE Alu 1 298 -14 2067 130 10 3 chr17 38846282 38846580 -46591900 + AluSx SINE Alu 1 301 -11 2099 125 7 0 chr17 38846583 38846880 -46591600 + AluSx SINE Alu 1 299 -13 298 207 43 165 chr17 38846964 38847128 -46591352 + L2 LINE L2 3166 3309 -4 1935 149 7 10 chr17 38847309 38847610 -46590870 + AluSq SINE Alu 1 300 -13 2007 148 0 7 chr17 38847763 38848061 -46590419 + AluJb SINE Alu 3 298 -14 1643 124 60 23 chr17 38848253 38848519 -46589961 + AluSx SINE Alu 12 287 -25 1383 184 54 40 chr17 38849104 38849216 -46589264 + AluJo SINE Alu 3 112 -201 2380 72 10 0 chr17 38849216 38849507 -46588973 + AluSc SINE Alu 1 294 -15 1383 184 54 40 chr17 38849507 38849701 -46588779 + AluJo SINE Alu 112 313 0 1619 97 14 0 chr17 38849755 38849962 -46588518 + AluY SINE Alu 85 294 -17 378 96 0 0 chr17 38850013 38850065 -46588415 - AluSp/q SINE Alu -10 293 242 2841 7 0 0 chr17 38850165 38850465 -46588015 - AluY SINE Alu -11 300 1 1875 136 27 30 chr17 38850793 38851088 -46587392 - AluSx SINE Alu -18 294 1 1845 102 66 36 chr17 38851295 38851596 -46586884 + AluSq SINE Alu 1 309 0 717 165 8 15 chr17 38851686 38851819 -46586661 + FRAM SINE Alu 1 40 0 654 212 0 9 chr17 38851855 38851968 -46586512 + FLAM_C SINE Alu 7 118 -25 1704 168 3 41 chr17 38852020 38852156 -46586324 + AluJo SINE Alu 1 123 -189 2281 57 7 4 chr17 38852156 38852466 -46586014 + AluY SINE Alu 1 311 0 1704 168 3 41 chr17 38852466 38852619 -46585861 + AluJo SINE Alu 123 280 -32 1410 164 105 42 chr17 38852621 38852725 -46585755 + AluSg SINE Alu 7 103 -207 2429 84 3 0 chr17 38852725 38853024 -46585456 + AluSp SINE Alu 1 300 -13 2491 56 0 13 chr17 38853027 38853329 -46585151 + AluY SINE Alu 3 300 -11 1410 164 105 42 chr17 38853329 38853506 -46584974 + AluSg SINE Alu 104 310 0 207 218 0 0 chr17 38853507 38853562 -46584918 + GA-rich Low_complexity Low_complexity 2 56 0 1146 142 6 0 chr17 38853626 38853795 -46584685 + AluSx SINE Alu 1 170 -142 2257 205 35 33 chr17 38854129 38854189 -46584291 + L1ME1 LINE L1 5267 5325 -841 2234 114 10 0 chr17 38854189 38854486 -46583994 + AluSg SINE Alu 1 300 -10 2257 205 35 33 chr17 38854486 38855024 -46583456 + L1ME1 LINE L1 5325 5866 -300 1893 111 7 62 chr17 38855036 38855324 -46583156 + AluSx SINE Alu 1 272 -40 298 259 95 52 chr17 38855432 38855548 -46582932 - L2 LINE L2 -27 3286 3166 2099 125 7 0 chr17 38855632 38855929 -46582551 - AluSx SINE Alu -13 299 1 2067 130 10 3 chr17 38855932 38856231 -46582249 - AluSx SINE Alu -11 301 1 1763 163 20 10 chr17 38856231 38856525 -46581955 - AluJo SINE Alu -14 298 1 544 188 215 0 chr17 38857155 38857299 -46581181 - MER96 DNA MER1_type? 0 175 1 22 70 0 0 chr17 38857810 38857853 -46580627 + GC_rich Low_complexity Low_complexity 1 43 0 2330 168 70 71 chr17 38858252 38858383 -46580097 + L1MC4a LINE L1 7191 7321 -487 2077 112 0 59 chr17 38858383 38858705 -46579775 - AluSx SINE Alu -9 303 1 816 164 0 16 chr17 38858709 38858837 -46579643 - FLAM_C SINE Alu -6 127 2 2330 168 70 71 chr17 38858837 38858945 -46579535 + L1MC4a LINE L1 7324 7431 -377 2050 118 20 0 chr17 38858945 38859241 -46579239 - AluSq SINE Alu -11 302 1 2330 168 70 71 chr17 38859241 38859614 -46578866 + L1MC4a LINE L1 7431 7808 0 251 330 90 47 chr17 38859641 38859874 -46578606 - MIR SINE MIR 0 262 20 713 189 33 50 chr17 38859989 38860032 -46578448 - MER5B DNA MER1_type -1 177 135 2351 74 3 17 chr17 38860032 38860328 -46578152 - AluSp SINE Alu -21 292 1 713 189 33 50 chr17 38860328 38860464 -46578016 - MER5B DNA MER1_type -43 135 1 286 321 69 8 chr17 38860527 38860658 -46577822 - L2 LINE L2 -1037 2277 2139 1832 195 0 6 chr17 38860937 38861250 -46577230 + AluJb SINE Alu 1 311 -1 212 219 47 31 chr17 38863123 38863187 -46575293 - MIR SINE MIR -16 246 182 1368 101 0 0 chr17 38863194 38863372 -46575108 - AluY SINE Alu -14 297 120 434 193 193 18 chr17 38863485 38863599 -46574881 + L2 LINE L2 3178 3311 -2 520 302 90 36 chr17 38863683 38863905 -46574575 - MIR SINE MIR -20 242 9 530 123 0 0 chr17 38864407 38864480 -46574000 + AluSg/x SINE Alu 196 268 -42 22 0 0 0 chr17 38864492 38864514 -46573966 + AT_rich Low_complexity Low_complexity 1 22 0 1331 218 95 3 chr17 38865200 38865484 -46572996 + AluJo SINE Alu 1 310 -2 297 287 10 47 chr17 38865532 38865685 -46572795 - MIR SINE MIR -65 143 1 1064 91 168 96 chr17 38865687 38865884 -46572596 - AluJb SINE Alu -15 297 87 248 288 0 27 chr17 38866544 38866617 -46571863 + MIR SINE MIR 36 106 -102 218 344 107 8 chr17 38866693 38866826 -46571654 - MIR SINE MIR -57 151 5 2328 90 7 0 chr17 38868074 38868363 -46570117 - AluSp SINE Alu -22 291 1 2300 90 7 7 chr17 38868363 38868673 -46569807 - AluSx SINE Alu -2 310 1 2190 108 0 13 chr17 38868731 38869036 -46569444 - AluY SINE Alu -10 301 1 1922 162 10 7 chr17 38869038 38869334 -46569146 - AluJb SINE Alu -15 297 1 2341 115 0 6 chr17 38869388 38869702 -46568778 - AluSx SINE Alu 0 312 1 234 276 87 24 chr17 38870059 38870186 -46568294 - L2 LINE L2 -652 2662 2528 640 201 146 7 chr17 38870318 38870462 -46568018 - FRAM SINE Alu -2 164 1 1266 150 0 41 chr17 38870488 38870647 -46567833 - AluSg/x SINE Alu -17 293 144 2078 88 35 18 chr17 38870647 38870931 -46567549 - AluSc SINE Alu -15 294 6 1266 150 0 41 chr17 38870931 38870991 -46567489 - AluSg/x SINE Alu -166 144 83 668 137 0 0 chr17 38870991 38871086 -46567394 - AluSg/x SINE Alu -62 250 156 33 68 0 0 chr17 38871195 38871239 -46567241 + GC_rich Low_complexity Low_complexity 1 44 0 1723 140 4 36 chr17 38873619 38873796 -46564684 - AluJb SINE Alu 0 311 146 2403 95 3 0 chr17 38873796 38874100 -46564380 - AluY SINE Alu -6 305 1 1723 140 4 36 chr17 38874100 38874229 -46564251 - AluJb SINE Alu -165 146 14 2007 134 7 7 chr17 38874729 38875019 -46563461 + AluSx SINE Alu 1 290 -22 1945 121 0 60 chr17 38875181 38875503 -46562977 + AluSg SINE Alu 2 305 0 219 327 45 9 chr17 38875781 38875891 -46562589 - L2 LINE L2 -652 2662 2549 1148 214 0 18 chr17 38875928 38876152 -46562328 + AluJo SINE Alu 1 220 -92 277 173 0 0 chr17 38876310 38876362 -46562118 + Alu SINE Alu 250 301 -1 228 273 0 0 chr17 38876366 38876410 -46562070 + G-rich Low_complexity Low_complexity 5 48 0 2220 126 3 0 chr17 38876544 38876853 -46561627 - AluSx SINE Alu -2 310 1 2439 60 3 0 chr17 38876863 38877179 -46561301 - AluSq SINE Alu 0 317 1 2210 114 3 0 chr17 38877907 38878206 -46560274 + AluSq SINE Alu 1 300 -13 537 219 124 78 chr17 38878277 38878519 -46559961 - MIR SINE MIR 0 262 10 182 182 0 121 chr17 38878675 38878741 -46559739 - MER5B DNA MER1_type -6 172 115 229 273 62 29 chr17 38879012 38879157 -46559323 - MIR SINE MIR -14 248 100 1849 152 31 10 chr17 38879158 38879447 -46559033 + AluJo SINE Alu 1 295 -17 1203 86 7 0 chr17 38879449 38879601 -46558879 + AluSx SINE Alu 1 153 -159 1970 66 58 0 chr17 38879603 38879846 -46558634 + AluSx SINE Alu 46 302 -10 284 253 297 0 chr17 38881375 38881466 -46557014 + MIR SINE MIR 124 241 -21 671 254 78 53 chr17 38881487 38881576 -46556904 + MIR SINE MIR 12 97 -165 2172 123 10 3 chr17 38881576 38881869 -46556611 + AluSx SINE Alu 1 295 -17 671 254 78 53 chr17 38881869 38882023 -46556457 + MIR SINE MIR 97 261 -1 474 264 45 45 chr17 38882135 38882313 -46556167 + MIR SINE MIR 23 200 -62 661 260 0 7 chr17 38882859 38883013 -46555467 + MIR SINE MIR 2 154 -108 1215 99 0 6 chr17 38883023 38883185 -46555295 + AluY SINE Alu 1 161 -150 1691 99 0 0 chr17 38883345 38883556 -46554924 + AluSg/x SINE Alu 87 297 -15 347 0 23 0 chr17 38883556 38883599 -46554881 + (TA)n Simple_repeat Simple_repeat 2 45 0 279 0 0 0 chr17 38883598 38883629 -46554851 + (TG)n Simple_repeat Simple_repeat 2 32 0 * 403 347 136 30 chr17 38883637 38884165 -46554315 - L2 LINE L2 -957 2357 1774 491 123 25 0 chr17 38884172 38884244 -46554236 + FLAM_A SINE Alu 42 118 -193 221 0 35 0 chr17 38884244 38884273 -46554207 + (TTTA)n Simple_repeat Simple_repeat 1 30 0 1852 149 16 23 chr17 38885876 38886184 -46552296 - AluJb SINE Alu -6 306 1 2450 92 7 0 chr17 38886571 38886876 -46551604 + AluSx SINE Alu 1 307 -5 487 350 56 42 chr17 38887232 38887735 -46550745 - L2 LINE L2 -2 3270 2764 2217 109 3 0 chr17 38888003 38888287 -46550193 + AluSx SINE Alu 13 297 -15 26 30 0 0 chr17 38889064 38889097 -46549383 + AT_rich Low_complexity Low_complexity 1 33 0 2487 70 0 0 chr17 38889184 38889485 -46548995 + AluY SINE Alu 6 306 -5 1897 148 6 49 chr17 38890173 38890312 -46548168 + AluJo SINE Alu 1 144 -168 2025 158 0 6 chr17 38890312 38890623 -46547857 + AluJb SINE Alu 1 309 -3 1897 148 6 49 chr17 38890623 38890807 -46547673 + AluJo SINE Alu 144 310 -2 1844 151 0 33 chr17 38890811 38891116 -46547364 + AluJo SINE Alu 1 295 -17 2457 88 3 16 chr17 38894105 38894422 -46544058 + AluSp SINE Alu 1 313 0 2268 102 0 26 chr17 38894435 38894748 -46543732 + AluY SINE Alu 2 306 -5 2290 78 4 0 chr17 38894959 38895240 -46543240 + AluSx SINE Alu 25 306 -6 242 322 103 26 chr17 38895325 38895558 -46542922 - L2 LINE L2 -1894 1420 1170 554 135 117 9 chr17 38895894 38896005 -46542475 + AluJo SINE Alu 20 142 -170 1508 158 69 43 chr17 38896007 38896310 -46542170 + AluJb SINE Alu 2 312 0 456 148 0 0 chr17 38897624 38897705 -46540775 - AluJ/FRAM SINE Alu 0 312 232 1493 136 3 105 chr17 38898309 38898595 -46539885 - AluJo SINE Alu -21 291 35 216 0 0 0 chr17 38899616 38899640 -46538840 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2190 103 0 4 chr17 38899643 38899924 -46538556 - AluSg SINE Alu -30 280 1 682 94 28 0 chr17 38899926 38900032 -46538448 - AluSc SINE Alu -11 298 190 2053 153 0 0 chr17 38900199 38900493 -46537987 + AluJo SINE Alu 1 294 -18 2399 106 3 0 chr17 38900495 38900806 -46537674 + AluSx SINE Alu 1 312 0 2159 120 7 3 chr17 38901447 38901747 -46536733 - AluSx SINE Alu -11 301 1 222 234 31 0 chr17 38903793 38903857 -46534623 + G-rich Low_complexity Low_complexity 2 67 0 323 316 129 41 chr17 38905886 38906303 -46532177 + L2 LINE L2 2325 2778 -536 348 341 22 22 chr17 38906357 38906583 -46531897 + L2 LINE L2 2870 3095 -177 225 269 108 62 chr17 38907700 38907830 -46530650 - MIR SINE MIR -70 192 57 21 0 0 0 chr17 38908104 38908125 -46530355 + GC_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr17 38908274 38908295 -46530185 + GC_rich Low_complexity Low_complexity 1 21 0 203 216 20 20 chr17 38908641 38908692 -46529788 + CT-rich Low_complexity Low_complexity 1 51 0 419 204 133 0 chr17 38908832 38908930 -46529550 + L2 LINE L2 3182 3292 -21 * 423 335 83 17 chr17 38908923 38909153 -46529327 - MIR SINE MIR -15 247 3 2207 108 0 14 chr17 38909282 38909578 -46528902 - AluSx SINE Alu -20 292 1 776 194 123 4 chr17 38909730 38909914 -46528566 - MER20 DNA MER1_type -1 218 1 236 233 138 52 chr17 38909949 38910065 -46528415 + MIR SINE MIR 131 256 -6 2289 73 0 28 chr17 38912260 38912584 -46525896 + AluSx SINE Alu 1 316 0 1976 164 7 3 chr17 38912597 38912907 -46525573 + AluJo SINE Alu 1 311 -1 226 245 0 0 chr17 38913113 38913166 -46525314 + L2 LINE L2 3257 3309 -4 2526 77 3 3 chr17 38914231 38914541 -46523939 + AluSp SINE Alu 2 311 -2 2079 116 34 3 chr17 38914550 38914844 -46523636 + AluSx SINE Alu 1 303 -9 394 316 121 5 chr17 38914954 38915144 -46523336 + MIR SINE MIR 45 256 -6 916 150 19 28 chr17 38915248 38915461 -46523019 - L1MB2 LINE L1 -7 6164 5954 458 265 34 27 chr17 38915503 38915650 -46522830 + L2 LINE L2 3163 3310 -3 318 312 102 13 chr17 38915821 38915978 -46522502 + MIR SINE MIR 84 254 -8 2217 102 31 0 chr17 38916090 38916383 -46522097 - AluSx SINE Alu -10 302 1 2590 44 0 7 chr17 38916730 38917027 -46521453 - AluY SINE Alu -16 295 1 883 186 0 87 chr17 38917122 38917353 -46521127 - L1MC4 LINE L1 -3 8039 7829 263 225 191 11 chr17 38922193 38922282 -46516198 - L2 LINE L2 -1 3271 3167 2423 112 0 0 chr17 38922343 38922656 -46515824 + AluSq SINE Alu 1 313 0 2521 60 3 22 chr17 38922657 38922974 -46515506 + AluY SINE Alu 1 311 0 1441 113 28 0 chr17 38923778 38923990 -46514490 + AluSg SINE Alu 1 218 -92 907 116 24 24 chr17 38924090 38924146 -46514334 + Tigger4(Zombi) DNA MER2_type 2535 2590 -141 2357 97 0 3 chr17 38924146 38924446 -46514034 + AluSx SINE Alu 1 299 -13 907 116 24 24 chr17 38924446 38924553 -46513927 + Tigger4(Zombi) DNA MER2_type 2589 2698 -33 689 317 102 35 chr17 38925724 38926519 -46511961 + L2 LINE L2 2423 3271 -1 2216 117 10 3 chr17 38927263 38927561 -46510919 + AluSx SINE Alu 1 300 -12 2340 113 3 0 chr17 38927582 38927892 -46510588 + AluSx SINE Alu 1 311 -1 2131 157 0 0 chr17 38927906 38928211 -46510269 + AluJb SINE Alu 1 305 -7 1508 176 23 47 chr17 38928441 38928742 -46509738 - AluJo SINE Alu -18 294 1 454 285 68 51 chr17 38930949 38931184 -46507296 + LTR16C LTR ERVL 71 309 -182 386 290 30 15 chr17 38931244 38931375 -46507105 + MER94 DNA DNA 2 134 0 606 221 92 33 chr17 38931897 38931942 -46506538 + L1MC5 LINE L1 7632 7673 -288 2109 101 18 4 chr17 38931942 38932247 -46506233 - AluSc SINE Alu 0 309 1 606 221 92 33 chr17 38932247 38932439 -46506041 + L1MC5 LINE L1 7673 7885 -76 283 271 133 26 chr17 38932479 38932630 -46505850 + L1ME2 LINE L1 5997 6163 -1 281 263 66 46 chr17 38932641 38932793 -46505687 + L1MC5 LINE L1 7771 7925 -36 2416 72 7 0 chr17 38932823 38933115 -46505365 + AluSc SINE Alu 6 299 -10 567 301 83 18 chr17 38933152 38933381 -46505099 - MIR SINE MIR 0 262 19 791 125 15 37 chr17 38933457 38933593 -46504887 - FLAM_C SINE Alu 0 133 1 1696 134 86 4 chr17 38933604 38933873 -46504607 - AluJo SINE Alu -20 292 2 775 223 52 16 chr17 38933891 38934084 -46504396 + MIR SINE MIR 63 262 0 2454 62 3 0 chr17 38934159 38934447 -46504033 - AluSx SINE Alu -23 289 1 273 276 53 0 chr17 38934480 38934556 -46503924 - MIR SINE MIR -62 146 67 2294 80 0 35 chr17 38935384 38935698 -46502782 + AluSx SINE Alu 4 306 -6 2233 85 11 4 chr17 38935698 38935979 -46502501 + AluSg SINE Alu 1 283 -27 582 249 139 9 chr17 38936018 38936300 -46502180 - L2 LINE L2 -277 3036 2727 533 175 7 42 chr17 38936311 38936454 -46502026 - L1MB8 LINE L1 -1 6177 6040 386 204 15 7 chr17 38936456 38936542 -46501938 - AluJ/FLAM SINE Alu -238 64 1 997 195 5 25 chr17 38936610 38936810 -46501670 - AluJb SINE Alu -15 297 102 354 109 0 0 chr17 38936810 38936865 -46501615 + Alu SINE Alu 242 296 -5 296 327 64 40 chr17 38937060 38937357 -46501123 - L1ME LINE L1 -466 5655 5352 202 157 20 20 chr17 38937576 38937627 -46500853 + CT-rich Low_complexity Low_complexity 2 52 0 297 0 0 0 chr17 38937658 38937691 -46500789 + (TG)n Simple_repeat Simple_repeat 2 34 0 2148 108 35 0 chr17 38937704 38937991 -46500489 - AluSx SINE Alu -15 297 1 554 218 0 104 chr17 38937992 38938009 -46500471 + L2 LINE L2 3141 3158 -155 2133 149 0 0 chr17 38938009 38938305 -46500175 - AluSx SINE Alu -16 296 1 554 218 0 104 chr17 38938305 38938480 -46500000 + L2 LINE L2 3158 3313 0 1990 141 28 0 chr17 38939412 38939703 -46498777 - AluJb SINE Alu -13 299 1 1718 180 7 3 chr17 38940147 38940442 -46498038 - AluJo SINE Alu -15 297 2 1981 124 28 7 chr17 38940607 38940742 -46497738 + AluSx SINE Alu 1 132 -180 2265 128 0 0 chr17 38940742 38941040 -46497440 + AluSx SINE Alu 1 298 -14 1981 124 28 7 chr17 38941040 38941195 -46497285 + AluSx SINE Alu 132 297 -15 1703 156 7 7 chr17 38941760 38942076 -46496404 - AluJb SINE Alu 0 316 1 2474 93 0 3 chr17 38942777 38943090 -46495390 - AluSx SINE Alu 0 312 1 279 296 102 0 chr17 38943736 38943844 -46494636 + MIR3 SINE MIR 75 193 -15 2101 126 0 3 chr17 38943966 38944272 -46494208 - AluSx SINE Alu 0 305 1 1988 137 0 14 chr17 38944272 38944565 -46493915 - AluSx SINE Alu -10 302 14 547 140 54 0 chr17 38945437 38945530 -46492950 + U6 snRNA snRNA 5 102 -5 38 0 0 0 chr17 38945531 38945569 -46492911 + AT_rich Low_complexity Low_complexity 1 38 0 198 103 0 0 chr17 38945611 38945640 -46492840 + (A)n Simple_repeat Simple_repeat 1 29 0 963 163 118 0 chr17 38945663 38945841 -46492639 + AluSg/x SINE Alu 105 303 -9 2133 118 3 0 chr17 38945848 38946159 -46492321 + AluSc SINE Alu 1 309 0 2415 54 0 0 chr17 38946166 38946444 -46492036 + AluY SINE Alu 34 311 0 185 348 27 37 chr17 38946465 38946652 -46491828 + L2 LINE L2 1879 2063 -1251 226 348 125 47 chr17 38946954 38947273 -46491207 + L2 LINE L2 2633 2976 -338 874 264 81 51 chr17 38947563 38947703 -46490777 + MLT1H LTR MaLR 39 173 -376 2246 120 7 0 chr17 38947703 38948012 -46490468 + AluSx SINE Alu 1 311 -1 874 264 81 51 chr17 38948012 38948341 -46490139 + MLT1H LTR MaLR 173 522 -27 1692 186 10 35 chr17 38948343 38948655 -46489825 - AluJo SINE Alu -1 311 8 890 269 35 31 chr17 38948709 38948773 -46489707 - MIR SINE MIR 0 262 200 2524 83 0 0 chr17 38948773 38949074 -46489406 + AluY SINE Alu 1 301 -10 890 269 35 31 chr17 38949074 38949269 -46489211 - MIR SINE MIR -62 200 2 2244 105 3 13 chr17 38949382 38949688 -46488792 - AluSq SINE Alu -10 303 1 192 83 62 21 chr17 38950376 38950424 -46488056 + GA-rich Low_complexity Low_complexity 2 51 0 1856 180 7 0 chr17 38950632 38950927 -46487553 + AluJb SINE Alu 1 297 -15 948 180 0 29 chr17 38950934 38951085 -46487395 + AluJb SINE Alu 144 291 -21 2326 114 3 0 chr17 38951085 38951393 -46487087 + AluSx SINE Alu 1 309 -3 948 180 0 29 chr17 38951393 38951413 -46487067 + AluJb SINE Alu 291 310 -2 1716 130 17 55 chr17 38952004 38952297 -46486183 - AluJb SINE Alu -30 282 1 769 269 0 0 chr17 38952396 38952567 -46485913 - MER5B DNA MER1_type -7 171 1 562 290 26 0 chr17 38952809 38952964 -46485516 + MIR SINE MIR 48 206 -56 2037 152 0 3 chr17 38953117 38953413 -46485067 + AluSx SINE Alu 1 295 -17 199 159 16 127 chr17 38953672 38953735 -46484745 + L2 LINE L2 3175 3230 -42 2406 95 0 3 chr17 38953743 38954047 -46484433 - AluSq SINE Alu -10 303 1 1665 177 3 30 chr17 38954260 38954560 -46483920 - AluJo SINE Alu -20 292 1 181 208 132 0 chr17 38954680 38954733 -46483747 - MIR SINE MIR -64 144 85 301 209 115 71 chr17 38954850 38954948 -46483532 + L1ME4a LINE L1 5717 5809 -312 2285 106 3 0 chr17 38954948 38955240 -46483240 + AluSx SINE Alu 1 293 -19 301 209 115 71 chr17 38955240 38955323 -46483157 + L1ME4a LINE L1 5809 5906 -215 497 161 0 80 chr17 38955806 38955918 -46482562 - L1MB8 LINE L1 -7 6171 6069 238 302 133 44 chr17 38956011 38956094 -46482386 + L2 LINE L2 3027 3101 -171 2258 100 10 3 chr17 38956094 38956385 -46482095 - AluSp SINE Alu -20 293 1 238 302 133 44 chr17 38956385 38956526 -46481954 + L2 LINE L2 3101 3271 -1 262 343 47 23 chr17 38956599 38956771 -46481709 + C-rich Low_complexity Low_complexity 4 179 0 942 107 0 0 chr17 38957678 38957800 -46480680 - AluJb SINE Alu -14 298 177 1659 79 0 0 chr17 38958612 38958814 -46479666 - AluSg SINE Alu -12 300 99 629 129 0 0 chr17 38959057 38959150 -46479330 - AluSg SINE Alu -216 94 2 1495 192 118 39 chr17 38959689 38960122 -46478358 + MLT1C LTR MaLR 1 467 0 1731 233 117 4 chr17 38960269 38960758 -46477722 - L1ME3A LINE L1 -5 6165 5622 273 57 0 0 chr17 38960759 38960794 -46477686 + (TC)n Simple_repeat Simple_repeat 2 36 0 721 117 10 0 chr17 38960867 38960970 -46477510 + FLAM_A SINE Alu 12 115 -27 3004 275 101 40 chr17 38961032 38961465 -46477015 - L2 LINE L2 -649 2665 2260 2463 68 14 0 chr17 38961465 38961761 -46476719 - AluSp SINE Alu -7 306 7 3004 275 101 40 chr17 38961761 38961814 -46476666 - L2 LINE L2 -1054 2260 2212 2771 27 0 0 chr17 38961814 38962115 -46476365 - AluY SINE Alu -10 301 1 3004 275 101 40 chr17 38962115 38963019 -46475461 - L2 LINE L2 -1102 2212 1188 562 241 54 83 chr17 38963549 38963790 -46474690 - MIR SINE MIR -26 236 3 1127 132 118 38 chr17 38964267 38964555 -46473925 + MER33 DNA MER1_type 1 311 -13 230 292 223 8 chr17 38964668 38964798 -46473682 + MIR3 SINE MIR 16 173 -35 258 253 30 20 chr17 38965286 38965385 -46473095 + (CGAG)n Simple_repeat Simple_repeat 1 100 0 288 0 0 0 chr17 38966300 38966332 -46472148 + (GA)n Simple_repeat Simple_repeat 1 32 0 1973 151 3 3 chr17 38966888 38967193 -46471287 - AluJb SINE Alu -1 311 7 2284 65 0 14 chr17 38967298 38967576 -46470904 - AluY SINE Alu -37 274 1 337 91 0 0 chr17 38967578 38967633 -46470847 + L1MB7 LINE L1 6114 6168 -16 2112 131 37 0 chr17 38968372 38968670 -46469810 - AluSx SINE Alu -3 309 1 233 241 12 24 chr17 38969359 38969442 -46469038 - L1MC5 LINE L1 -50 7911 7830 429 293 17 72 chr17 38970344 38970525 -46467955 - MIR SINE MIR -32 230 60 2308 114 3 0 chr17 38970979 38971286 -46467194 - AluSq SINE Alu -5 308 1 324 253 13 0 chr17 38971343 38971422 -46467058 - MIR SINE MIR 0 262 183 2192 198 24 4 chr17 38971463 38971927 -46466553 + L1MC4a LINE L1 6605 7077 -731 1875 119 53 30 chr17 38971936 38972221 -46466259 + L1MA8 LINE L1 5765 6063 -228 1980 144 10 17 chr17 38972221 38972520 -46465960 + AluJo SINE Alu 1 297 -15 1875 119 53 30 chr17 38972520 38972629 -46465851 + L1MA8 LINE L1 6063 6168 -123 969 216 0 0 chr17 38972630 38972801 -46465679 + FRAM SINE Alu 1 171 -5 197 274 142 0 chr17 38972813 38972919 -46465561 + L2 LINE L2 3193 3313 0 2001 142 17 0 chr17 38973082 38973370 -46465110 - AluSx SINE Alu -19 293 1 215 324 172 20 chr17 38976146 38976350 -46462130 - L2 LINE L2 -207 3065 2831 1164 149 11 0 chr17 38976746 38976921 -46461559 - AluSg/x SINE Alu -1 309 133 2296 105 10 0 chr17 38976922 38977228 -46461252 - AluSx SINE Alu -3 309 1 267 54 0 0 chr17 38977450 38977487 -46460993 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 606 187 0 72 chr17 38977487 38977626 -46460854 - FRAM SINE Alu -29 147 19 312 102 0 0 chr17 38977728 38977777 -46460703 + (TG)n Simple_repeat Simple_repeat 1 49 0 667 144 17 42 chr17 38978081 38978092 -46460388 + GA-rich Low_complexity Low_complexity 1 11 -516 2238 134 0 0 chr17 38978092 38978398 -46460082 + AluSx SINE Alu 1 306 -6 667 144 17 42 chr17 38978398 38978622 -46459858 + GA-rich Low_complexity Low_complexity 11 527 0 324 0 0 0 chr17 38978638 38978701 -46459779 + (CAAG)n Simple_repeat Simple_repeat 1 99 0 324 0 0 0 chr17 38978701 38978737 -46459743 + (CAAG)n Simple_repeat Simple_repeat 2 37 0 2555 84 0 0 chr17 38978737 38979046 -46459434 + AluSx SINE Alu 4 312 0 989 110 0 34 chr17 38979064 38979210 -46459270 + FLAM_C SINE Alu 3 143 0 385 262 0 0 chr17 38979218 38979302 -46459178 + AluJ/FRAM SINE Alu 219 302 0 1336 200 237 12 chr17 38979470 38979956 -46458524 + LTR61 LTR ERV1 1 595 0 2254 126 0 0 chr17 38980129 38980430 -46458050 + AluSx SINE Alu 1 301 -11 592 191 53 23 chr17 38980440 38980571 -46457909 + AluJo SINE Alu 3 137 -175 1282 108 0 0 chr17 38980671 38980838 -46457642 + AluY SINE Alu 133 299 -12 299 288 65 59 chr17 38981036 38981097 -46457383 + L2 LINE L2 3117 3176 -96 2330 112 3 0 chr17 38981097 38981401 -46457079 - AluSx SINE Alu -7 305 1 299 288 65 59 chr17 38981401 38981492 -46456988 + L2 LINE L2 3176 3270 -2 1939 157 0 23 chr17 38981653 38981958 -46456522 - AluJo SINE Alu -14 298 1 2339 114 0 13 chr17 38981966 38982144 -46456336 - AluSq SINE Alu -2 311 137 2223 130 0 0 chr17 38982144 38982445 -46456035 - AluSg1 SINE Alu -8 301 1 2339 114 0 13 chr17 38982445 38982581 -46455899 - AluSq SINE Alu -176 137 1 2234 93 0 42 chr17 38983402 38983714 -46454766 - AluSx SINE Alu -13 299 1 400 278 70 104 chr17 38984678 38984811 -46453669 + MIR SINE MIR 2 138 -124 2376 91 3 0 chr17 38984811 38985109 -46453371 + AluSp SINE Alu 1 299 -14 1977 101 0 22 chr17 38985113 38985409 -46453071 + AluSp SINE Alu 23 312 0 400 278 70 104 chr17 38985409 38985420 -46453060 + MIR SINE MIR 141 151 -111 2270 99 0 7 chr17 38985420 38985722 -46452758 + AluSq SINE Alu 1 300 -13 400 278 70 104 chr17 38985722 38985840 -46452640 + MIR SINE MIR 151 262 0 2489 76 0 0 chr17 38985948 38986250 -46452230 + AluY SINE Alu 1 302 -9 796 137 33 162 chr17 38986252 38986493 -46451987 - MER6B DNA MER2_type 0 210 1 445 306 137 9 chr17 38988963 38989182 -46449298 - MIR SINE MIR -3 259 13 1192 189 8 37 chr17 38992723 38992879 -46445601 - AluJb SINE Alu -18 294 146 1612 134 95 42 chr17 38992879 38993162 -46445318 - AluSx SINE Alu -14 298 1 1192 189 8 37 chr17 38993162 38993248 -46445232 - AluJb SINE Alu -166 146 59 699 172 167 48 chr17 38993494 38993621 -46444859 + MER3 DNA MER1_type 1 112 -97 357 24 0 0 chr17 38993621 38993663 -46444817 + (TA)n Simple_repeat Simple_repeat 2 43 0 1907 162 0 0 chr17 38993663 38993947 -46444533 - AluJb SINE Alu -28 284 1 699 172 167 48 chr17 38993947 38994004 -46444476 + MER3 DNA MER1_type 111 208 -1 424 206 284 26 chr17 38995625 38995819 -46442661 - HAL1b LINE L1 -27 1321 1078 244 45 0 45 chr17 38998689 38998733 -46439747 + (TTTTG)n Simple_repeat Simple_repeat 1 42 0 2295 105 16 0 chr17 38999937 39000241 -46438239 - AluSg SINE Alu -1 309 1 266 265 12 12 chr17 39002079 39002162 -46436318 + CT-rich Low_complexity Low_complexity 2 84 0 592 263 201 10 chr17 39002823 39003207 -46435273 + L1MC4a LINE L1 5716 6172 -1636 2400 97 7 0 chr17 39003953 39004262 -46434218 - AluSq SINE Alu -2 311 1 2358 100 3 0 chr17 39004947 39005247 -46433233 - AluSq SINE Alu -12 301 1 217 228 112 100 chr17 39005295 39005545 -46432935 + L2 LINE L2 1946 2198 -1116 1119 156 0 33 chr17 39005557 39005737 -46432743 - AluJb SINE Alu 0 312 139 995 180 0 23 chr17 39005837 39006009 -46432471 + FRAM SINE Alu 8 175 -1 874 264 81 51 chr17 39006011 39006340 -46432140 - MLT1H LTR MaLR -27 522 173 2246 120 7 0 chr17 39006340 39006649 -46431831 - AluSx SINE Alu -1 311 1 874 264 81 51 chr17 39006649 39006789 -46431691 - MLT1H LTR MaLR -376 173 39 226 348 125 47 chr17 39007079 39007398 -46431082 - L2 LINE L2 -338 2976 2633 185 348 27 37 chr17 39007700 39007887 -46430593 - L2 LINE L2 -1251 2063 1879 2385 58 0 0 chr17 39007908 39008186 -46430294 - AluY SINE Alu 0 311 34 2142 118 3 0 chr17 39008192 39008504 -46429976 - AluSc SINE Alu 0 309 1 963 163 118 0 chr17 39008511 39008689 -46429791 - AluSg/x SINE Alu -9 303 105 198 103 0 0 chr17 39008712 39008741 -46429739 + (T)n Simple_repeat Simple_repeat 1 29 0 38 0 0 0 chr17 39008783 39008821 -46429659 + AT_rich Low_complexity Low_complexity 1 38 0 533 151 54 0 chr17 39008822 39008915 -46429565 - U6 snRNA snRNA -5 102 5 1980 139 0 14 chr17 39009787 39010081 -46428399 + AluSx SINE Alu 14 303 -9 2095 126 0 3 chr17 39010081 39010387 -46428093 + AluSx SINE Alu 1 305 0 279 296 102 0 chr17 39010508 39010616 -46427864 - MIR3 SINE MIR -15 193 75 2358 83 0 7 chr17 39011263 39011564 -46426916 + AluSg SINE Alu 1 299 -11 2154 116 3 10 chr17 39012096 39012411 -46426069 + AluSg SINE Alu 1 313 0 388 247 12 0 chr17 39012412 39012493 -46425987 - MER63 DNA MER1_type -328 734 27 323 274 215 46 chr17 39012508 39012727 -46425753 + MIR SINE MIR 7 262 0 322 323 10 0 chr17 39012747 39012843 -46425637 - MIR SINE MIR -68 140 44 1831 113 74 28 chr17 39012926 39013209 -46425271 - AluJb SINE Alu -16 296 1 1727 154 0 33 chr17 39014282 39014625 -46423855 + AluJo SINE Alu 1 312 0 2133 146 0 9 chr17 39014826 39015141 -46423339 - AluJb SINE Alu 0 312 1 273 57 0 0 chr17 39015359 39015394 -46423086 + (TG)n Simple_repeat Simple_repeat 2 36 0 185 0 40 0 chr17 39015542 39015567 -46422913 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 725 159 0 0 chr17 39015567 39015680 -46422800 - FLAM_C SINE Alu -22 121 9 1718 180 7 3 chr17 39016684 39016979 -46421501 - AluJo SINE Alu -15 297 2 2150 108 35 0 chr17 39017144 39017431 -46421049 + AluSx SINE Alu 1 297 -15 297 0 0 0 chr17 39017444 39017477 -46421003 + (CA)n Simple_repeat Simple_repeat 2 34 0 202 157 20 20 chr17 39017508 39017559 -46420921 + GA-rich Low_complexity Low_complexity 2 52 0 2214 103 0 10 chr17 39017761 39018061 -46420419 + AluSx SINE Alu 1 297 -15 312 172 0 0 chr17 39018108 39018166 -46420314 + GA-rich Low_complexity Low_complexity 3 60 0 780 231 125 5 chr17 39018188 39018396 -46420084 - LTR16A LTR ERVL -11 439 207 1663 164 22 32 chr17 39018598 39018910 -46419570 + AluJo SINE Alu 4 312 0 686 288 17 29 chr17 39018932 39019172 -46419308 - L2 LINE L2 -246 3067 2831 415 233 68 10 chr17 39019233 39019336 -46419144 + L2 LINE L2 3164 3272 0 394 204 18 0 chr17 39019348 39019461 -46419019 + (TGGA)n Simple_repeat Simple_repeat 4 118 0 354 331 80 0 chr17 39019781 39019932 -46418548 - MIR3 SINE MIR -1 207 45 1630 181 17 10 chr17 39020032 39020324 -46418156 - AluJb SINE Alu -13 299 6 2425 84 0 0 chr17 39020409 39020705 -46417775 - AluSg SINE Alu -14 296 1 2266 102 7 20 chr17 39020705 39021008 -46417472 - AluSq SINE Alu -14 299 1 907 154 0 7 chr17 39021008 39021144 -46417336 - AluJo SINE Alu -177 135 1 2391 55 41 3 chr17 39021859 39022151 -46416329 - AluY SINE Alu -8 303 1 208 308 154 10 chr17 39022194 39022298 -46416182 + L3b LINE CR1 1354 1472 -111 651 297 177 6 chr17 39022298 39022711 -46415769 + L3 LINE CR1 988 1533 -44 307 343 10 0 chr17 39023664 39023763 -46414717 - L3 LINE CR1 -82 1495 1396 764 153 0 36 chr17 39024637 39024774 -46413706 - FLAM_A SINE Alu -1 132 1 2048 117 19 29 chr17 39024796 39025103 -46413377 - AluSx SINE Alu -8 304 1 2272 148 2 84 chr17 39025860 39026163 -46412317 - L1MB8 LINE L1 -42 6136 5810 1819 138 44 4 chr17 39026163 39026438 -46412042 + AluJo SINE Alu 1 286 -26 333 0 0 0 chr17 39026439 39026476 -46412004 + (TGAA)n Simple_repeat Simple_repeat 3 39 0 2272 148 2 84 chr17 39026476 39026713 -46411767 - L1MB8 LINE L1 -367 5811 5546 2041 141 3 13 chr17 39026823 39027135 -46411345 - AluJb SINE Alu -3 309 1 2095 108 22 0 chr17 39027683 39027988 -46410492 + AluSx SINE Alu 1 311 0 1519 195 13 44 chr17 39028005 39028148 -46410332 + AluJb SINE Alu 1 147 -165 2389 104 3 3 chr17 39028148 39028456 -46410024 + AluSx SINE Alu 1 308 -4 1519 195 13 44 chr17 39028456 39028630 -46409850 + AluJb SINE Alu 147 308 -4 213 292 31 15 chr17 39028754 39028819 -46409661 - MIR SINE MIR -64 144 79 2102 120 48 0 chr17 39029382 39029673 -46408807 + AluSx SINE Alu 1 305 -7 1873 133 7 41 chr17 39030434 39030728 -46407752 - AluJo SINE Alu -28 284 1 294 0 0 26 chr17 39031388 39031426 -46407054 + (TTTTG)n Simple_repeat Simple_repeat 2 60 0 2329 92 0 0 chr17 39031426 39031709 -46406771 - AluSx SINE Alu -29 283 1 242 28 0 28 chr17 39031990 39032026 -46406454 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 630 268 50 29 chr17 39032734 39032973 -46405507 - L1ME LINE L1 -322 5799 5556 1002 168 0 22 chr17 39033454 39033633 -46404847 - AluJb SINE Alu -1 311 137 2301 105 0 0 chr17 39033633 39033927 -46404553 - AluSx SINE Alu -18 294 1 1501 132 4 13 chr17 39033969 39034197 -46404283 + AluSg/x SINE Alu 75 300 -10 2670 49 0 0 chr17 39034199 39034503 -46403977 + AluY SINE Alu 2 305 -6 482 236 33 61 chr17 39034504 39034716 -46403764 - L1MC4 LINE L1 -50 7992 7787 434 123 0 86 chr17 39034946 39035027 -46403453 + AluJ/FRAM SINE Alu 224 297 -15 2399 143 121 36 chr17 39035084 39035391 -46403089 - LTR64 LTR ERVK -12 546 178 1588 144 0 9 chr17 39035391 39035620 -46402860 - AluJb SINE Alu -1 311 85 2399 143 121 36 chr17 39035620 39035815 -46402665 - LTR64 LTR ERVK -380 178 1 1404 131 0 0 chr17 39035838 39036029 -46402451 + AluY SINE Alu 1 191 -120 2232 102 3 47 chr17 39036384 39036706 -46401774 + AluSx SINE Alu 4 311 -1 21 0 0 0 chr17 39036936 39036957 -46401523 + AT_rich Low_complexity Low_complexity 1 21 0 871 0 0 0 chr17 39037064 39037157 -46401323 + HY4 scRNA scRNA 1 93 0 2167 111 0 7 chr17 39037211 39037509 -46400971 - AluY SINE Alu -15 296 1 930 198 6 17 chr17 39037736 39037908 -46400572 - AluJo SINE Alu -11 301 132 323 244 156 11 chr17 39037928 39038018 -46400462 + HAL1b LINE L1 964 1066 -282 2235 125 3 0 chr17 39038080 39038385 -46400095 - AluSq SINE Alu -7 306 1 549 140 252 9 chr17 39038439 39038546 -46399934 - AluJo SINE Alu -178 134 2 1477 105 0 19 chr17 39038575 39038784 -46399696 - AluSg/x SINE Alu -23 289 85 2758 42 0 0 chr17 39038792 39039103 -46399377 - AluY SINE Alu 0 311 1 1409 129 9 21 chr17 39039103 39039336 -46399144 - AluSq SINE Alu -3 310 81 658 153 0 10 chr17 39039443 39039541 -46398939 - AluJ/FLAM SINE Alu -213 99 3 669 302 114 31 chr17 39039548 39039777 -46398703 + L2 LINE L2 2359 2568 -746 2100 107 55 0 chr17 39039777 39040068 -46398412 - AluSq SINE Alu -6 307 1 669 302 114 31 chr17 39040068 39040225 -46398255 + L2 LINE L2 2568 2777 -537 750 178 0 8 chr17 39040243 39040361 -46398119 + FLAM_C SINE Alu 2 118 -25 2225 140 0 6 chr17 39040380 39040694 -46397786 - AluSx SINE Alu 0 312 1 2386 158 18 5 chr17 39040785 39041227 -46397253 + L1MB7 LINE L1 5679 6126 -58 1878 189 7 0 chr17 39041238 39041544 -46396936 - AluJo SINE Alu -4 308 1 2314 117 0 0 chr17 39041554 39041861 -46396619 - AluSq SINE Alu -2 311 5 2259 123 10 3 chr17 39041877 39042187 -46396293 - AluSx SINE Alu 0 312 1 359 118 0 27 chr17 39042187 39042260 -46396220 + L1MB7 LINE L1 6110 6178 0 419 272 129 84 chr17 39042264 39042746 -46395734 + L2 LINE L2 2778 3272 0 314 262 196 65 chr17 39043277 39043527 -46394953 - L1MC4 LINE L1 -996 7046 6830 2293 115 3 3 chr17 39043527 39043839 -46394641 + AluSx SINE Alu 1 312 0 314 262 196 65 chr17 39043839 39043850 -46394630 - L1MC4 LINE L1 -1212 6830 6822 2052 118 47 3 chr17 39043850 39044147 -46394333 + AluSg SINE Alu 1 310 0 314 262 196 65 chr17 39044147 39044233 -46394247 - L1MC4 LINE L1 -1220 6822 6563 21 36 0 0 chr17 39044246 39044274 -46394206 + AT_rich Low_complexity Low_complexity 1 28 0 741 171 23 0 chr17 39044276 39044405 -46394075 + FLAM_C SINE Alu 1 132 -1 466 193 0 0 chr17 39044834 39044917 -46393563 - FLAM_A SINE Alu -16 126 44 6439 40 12 7 chr17 39045124 39045872 -46392608 + SVA Other Other 635 1386 0 26 0 0 0 chr17 39045872 39045898 -46392582 + AT_rich Low_complexity Low_complexity 1 26 0 2199 123 3 10 chr17 39045935 39046243 -46392237 + AluSq SINE Alu 1 306 -7 421 314 80 73 chr17 39046324 39046350 -46392130 - L2 LINE L2 0 3272 3248 2194 139 0 0 chr17 39046350 39046651 -46391829 + AluSx SINE Alu 1 301 -11 421 314 80 73 chr17 39046651 39046712 -46391768 - L2 LINE L2 -24 3248 3189 1877 181 0 3 chr17 39046712 39047016 -46391464 + AluJb SINE Alu 1 303 -9 421 314 80 73 chr17 39047016 39047354 -46391126 - L2 LINE L2 -83 3189 2843 2191 132 0 0 chr17 39047530 39047834 -46390646 - AluSg SINE Alu -6 304 1 2002 134 20 3 chr17 39047839 39048137 -46390343 - AluSx SINE Alu -9 303 1 233 209 60 0 chr17 39048141 39048208 -46390272 - Charlie8 DNA MER1_type -2258 159 89 420 271 109 16 chr17 39048311 39048503 -46389977 + MIR SINE MIR 53 262 0 2261 107 7 0 chr17 39048612 39048902 -46389578 + AluSx SINE Alu 1 292 -20 2340 108 0 3 chr17 39050178 39050485 -46387995 - AluSx SINE Alu -6 306 1 2572 47 0 3 chr17 39050543 39050839 -46387641 - AluY SINE Alu -16 295 1 1261 135 33 49 chr17 39052078 39052323 -46386157 - L1MB8 LINE L1 -5 6173 5933 261 152 0 22 chr17 39052593 39052639 -46385841 + L2 LINE L2 3268 3312 -1 311 341 89 7 chr17 39052645 39052780 -46385700 - MIR SINE MIR -115 147 2 1926 150 0 20 chr17 39052837 39053143 -46385337 + AluSx SINE Alu 1 300 -12 1803 181 7 0 chr17 39053788 39054075 -46384405 - AluJo SINE Alu -23 289 1 2286 121 0 0 chr17 39054220 39054517 -46383963 + AluSx SINE Alu 1 297 -15 2228 102 3 0 chr17 39054722 39055029 -46383451 + AluSp SINE Alu 1 308 0 2512 47 7 13 chr17 39055975 39056275 -46382205 + AluY SINE Alu 1 298 -13 1403 173 0 13 chr17 39056359 39056584 -46381896 + AluJb SINE Alu 3 224 -88 826 200 30 24 chr17 39056615 39056780 -46381700 + FRAM SINE Alu 1 166 0 216 209 0 0 chr17 39057141 39057184 -46381296 + A-rich Low_complexity Low_complexity 1 43 0 379 338 120 32 chr17 39057346 39057562 -46380918 + L2 LINE L2 3031 3265 -7 2215 112 30 0 chr17 39057588 39057891 -46380589 + AluSx SINE Alu 1 312 0 1899 126 8 0 chr17 39058231 39058492 -46379988 + AluSx SINE Alu 38 300 -12 1557 167 4 25 chr17 39058497 39058773 -46379707 + AluJo SINE Alu 1 270 -42 2270 90 0 45 chr17 39058789 39059099 -46379381 + AluSg SINE Alu 1 296 -14 2015 147 20 0 chr17 39059101 39059407 -46379073 + AluJb SINE Alu 1 312 0 906 152 6 32 chr17 39060148 39060306 -46378174 - MER5A DNA MER1_type -34 155 2 2387 71 0 3 chr17 39060741 39061037 -46377443 + AluY SINE Alu 1 295 -16 2329 112 3 0 chr17 39061044 39061348 -46377132 + AluSx SINE Alu 2 306 -6 776 189 81 0 chr17 39061393 39061541 -46376939 + FAM SINE Alu 1 48 -1 2322 105 0 0 chr17 39061562 39061857 -46376623 + AluSx SINE Alu 1 295 -17 1535 140 18 113 chr17 39061866 39062195 -46376285 + AluJb SINE Alu 1 298 -14 466 313 69 28 chr17 39062419 39062636 -46375844 + MIR SINE MIR 18 243 -19 618 312 93 0 chr17 39062647 39062852 -46375628 + MIR SINE MIR 15 238 -24 658 71 0 0 chr17 39062968 39063052 -46375428 - HY4 scRNA scRNA -9 84 1 1016 117 93 0 chr17 39064198 39064360 -46374120 - AluJb SINE Alu -1 311 135 261 319 0 0 chr17 39064676 39064745 -46373735 + MIR SINE MIR 191 259 -3 210 37 0 0 chr17 39065514 39065541 -46372939 + (TTTTG)n Simple_repeat Simple_repeat 1 27 0 471 63 380 0 chr17 39065548 39065627 -46372853 - AluYa5 SINE Alu -48 263 155 694 140 0 0 chr17 39065727 39065827 -46372653 + AluSp/q SINE Alu 189 288 -25 709 136 0 0 chr17 39065835 39065938 -46372542 + AluY SINE Alu 2 104 -207 316 115 0 19 chr17 39065938 39065990 -46372490 + AluSp/q SINE Alu 205 255 -48 2165 134 0 3 chr17 39066115 39066421 -46372059 + AluSx SINE Alu 1 305 -7 2206 80 7 11 chr17 39066588 39066875 -46371605 + AluY SINE Alu 1 286 -25 2331 88 0 7 chr17 39067002 39067297 -46371183 + AluY SINE Alu 1 293 -18 2000 101 49 14 chr17 39067811 39068099 -46370381 + AluSc SINE Alu 1 298 -11 542 213 158 49 chr17 39068334 39068498 -46369982 - MER5A DNA MER1_type -6 183 2 2479 60 3 3 chr17 39068917 39069215 -46369265 - AluY SINE Alu -13 298 1 1886 143 7 27 chr17 39069217 39069511 -46368969 - AluSg SINE Alu -22 288 1 620 226 124 0 chr17 39069693 39069870 -46368610 + MIR SINE MIR 44 242 -20 2423 83 7 0 chr17 39069901 39070202 -46368278 - AluSx SINE Alu -9 303 1 772 145 73 0 chr17 39070203 39070327 -46368153 - FLAM_A SINE Alu 0 142 10 371 156 0 0 chr17 39070354 39070418 -46368062 - AluS SINE Alu -5 296 233 847 87 118 8 chr17 39070420 39070547 -46367933 - AluYb8 SINE Alu -176 142 2 2104 125 0 7 chr17 39070610 39070906 -46367574 - AluSq SINE Alu -18 295 2 2170 115 3 7 chr17 39070969 39071274 -46367206 - AluSq SINE Alu -9 304 1 264 263 38 25 chr17 39071274 39071354 -46367126 - L2 LINE L2 -7 3306 3226 301 89 0 0 chr17 39072044 39072089 -46366391 + Alu SINE Alu 1 45 -257 1579 108 5 5 chr17 39072089 39072302 -46366178 + AluSg/x SINE Alu 88 300 -12 1992 130 7 14 chr17 39072319 39072603 -46365877 + AluSx SINE Alu 1 282 -30 396 0 0 0 chr17 39072629 39072673 -46365807 + (TA)n Simple_repeat Simple_repeat 1 44 0 2235 118 0 0 chr17 39072835 39073132 -46365348 - AluY SINE Alu -12 299 3 834 164 0 0 chr17 39073135 39073263 -46365217 - AluSp/q SINE Alu 0 313 186 517 183 33 33 chr17 39073369 39073489 -46364991 + FRAM SINE Alu 40 159 -17 1826 71 0 0 chr17 39073492 39073718 -46364762 + AluY SINE Alu 86 311 0 2333 107 0 0 chr17 39074054 39074354 -46364126 + AluSc SINE Alu 1 300 -9 22 0 0 0 chr17 39074428 39074450 -46364030 + AT_rich Low_complexity Low_complexity 1 22 0 1712 156 3 28 chr17 39075239 39075522 -46362958 - AluJo SINE Alu -23 289 14 835 158 8 0 chr17 39075525 39075652 -46362828 - FLAM_A SINE Alu -5 128 1 2223 110 23 0 chr17 39076089 39076389 -46362091 - AluSx SINE Alu -5 307 1 345 280 0 0 chr17 39076488 39076563 -46361917 - HAL1 LINE L1 -731 1776 1702 510 100 0 14 chr17 39076727 39076797 -46361683 - Alu SINE Alu -248 70 2 2019 103 92 0 chr17 39076948 39077229 -46361251 - AluSq SINE Alu -6 307 1 481 197 143 41 chr17 39077405 39077552 -46360928 - L2 LINE L2 -9 3304 3143 1933 131 10 7 chr17 39077552 39077842 -46360638 - AluSx SINE Alu -21 291 1 551 181 17 17 chr17 39077971 39078087 -46360393 + AluJb SINE Alu 190 305 -7 368 158 0 37 chr17 39078121 39078203 -46360277 - L1MA8 LINE L1 -234 6057 5979 2135 96 3 20 chr17 39078764 39079085 -46359395 - AluSp SINE Alu 0 313 1 190 246 70 0 chr17 39079595 39079652 -46358828 - MIR3 SINE MIR -38 170 110 1495 171 96 43 chr17 39079841 39079996 -46358484 + MLT1A1 LTR MaLR 3 148 -217 2473 81 0 16 chr17 39079996 39080306 -46358174 + AluSq SINE Alu 1 305 -8 1495 171 96 43 chr17 39080306 39080495 -46357985 + MLT1A1 LTR MaLR 148 365 0 269 215 31 0 chr17 39080698 39080763 -46357717 + L1MC4a LINE L1 5875 5941 -1867 1822 184 7 3 chr17 39080820 39081119 -46357361 + AluJb SINE Alu 1 300 -12 2387 82 3 0 chr17 39081119 39081412 -46357068 + AluSq SINE Alu 1 294 -19 1027 157 0 7 chr17 39081474 39081627 -46356853 + AluSg/x SINE Alu 145 296 -16 573 225 162 9 chr17 39081847 39082069 -46356411 - L1M4 LINE L1 -3531 2615 2360 445 167 0 0 chr17 39082069 39082135 -46356345 + MER75 DNA T2_type 1 66 -448 2245 101 3 0 chr17 39082214 39082522 -46355958 + AluSc SINE Alu 1 309 0 943 154 7 0 chr17 39082522 39082671 -46355809 + AluSg/x SINE Alu 132 281 -29 242 273 108 22 chr17 39083261 39083297 -46355183 + L1MC/D LINE L1 5631 5662 -2146 2110 111 3 0 chr17 39083297 39083586 -46354894 + AluSq SINE Alu 1 290 -23 242 273 108 22 chr17 39083586 39083688 -46354792 + L1MC/D LINE L1 5662 5781 -2027 1648 138 17 37 chr17 39083709 39084007 -46354473 + AluSx SINE Alu 20 311 -1 205 300 81 69 chr17 39084608 39084855 -46353625 + L2 LINE L2 2939 3188 -84 997 161 0 12 chr17 39084928 39085123 -46353357 + AluJo SINE Alu 123 315 0 1094 102 48 6 chr17 39085235 39085401 -46353079 - AluSq SINE Alu -7 306 134 1494 127 4 4 chr17 39085401 39085629 -46352851 - AluSg/x SINE Alu -13 299 72 2379 72 0 10 chr17 39086432 39086738 -46351742 - AluY SINE Alu -8 303 1 335 146 85 24 chr17 39087576 39087658 -46350822 + L1 LINE L1 4019 4105 -2041 2729 13 0 0 chr17 39087658 39087964 -46350516 - AluY SINE Alu -5 306 1 595 181 53 23 chr17 39087964 39088097 -46350383 - AluJb SINE Alu -12 300 164 353 327 79 18 chr17 39088304 39088469 -46350011 - MIR SINE MIR -34 228 54 835 96 96 0 chr17 39088470 39088605 -46349875 - AluSg/x SINE Alu -1 311 164 332 303 95 39 chr17 39088710 39089010 -46349470 - L1MCa LINE L1 -1548 4878 1820 652 133 97 0 chr17 39089020 39089133 -46349347 - FLAM_C SINE Alu -18 125 2 888 280 45 55 chr17 39089313 39089510 -46348970 - L1MC4a LINE L1 -1883 5925 5728 2215 95 0 0 chr17 39089510 39089804 -46348676 - AluSq SINE Alu -18 295 2 888 280 45 55 chr17 39089804 39090028 -46348452 - L1MC4a LINE L1 -2080 5728 5508 1970 133 0 37 chr17 39090080 39090404 -46348076 - AluSx SINE Alu 0 312 1 1406 101 0 19 chr17 39090432 39090641 -46347839 - AluSg/x SINE Alu -23 287 83 2171 120 0 0 chr17 39090893 39091192 -46347288 + AluSx SINE Alu 1 299 -13 1745 151 25 0 chr17 39092044 39092329 -46346151 - AluJb SINE Alu -9 303 12 1545 91 5 0 chr17 39092436 39092645 -46345835 + AluSg/x SINE Alu 83 292 -18 702 342 42 27 chr17 39092649 39092825 -46345655 - L2 LINE L2 -624 2690 2518 2068 97 35 0 chr17 39092825 39093113 -46345367 + AluSx SINE Alu 12 309 -3 702 342 42 27 chr17 39093113 39093340 -46345140 - L2 LINE L2 -796 2518 2281 1439 159 104 11 chr17 39094113 39094383 -46344097 + AluJo SINE Alu 1 295 -17 2127 111 3 3 chr17 39094384 39094681 -46343799 + AluSc SINE Alu 1 297 -12 283 311 75 94 chr17 39094682 39094949 -46343531 - L2 LINE L2 -1 3271 3010 1636 164 37 3 chr17 39095114 39095412 -46343068 + AluJo SINE Alu 1 308 -4 1137 123 6 0 chr17 39095448 39095618 -46342862 - AluSg/x SINE Alu -15 295 125 303 261 27 101 chr17 39095946 39096134 -46342346 + L2 LINE L2 2892 3065 -248 211 321 37 0 chr17 39096217 39096298 -46342182 + L2 LINE L2 3226 3309 -4 186 133 0 0 chr17 39096593 39096623 -46341857 + (CCCTAG)n Simple_repeat Simple_repeat 5 34 0 2429 55 3 6 chr17 39097163 39097475 -46341005 + AluSx SINE Alu 1 311 -1 2405 39 0 0 chr17 39097475 39097758 -46340722 + AluY SINE Alu 1 283 -28 2076 94 4 0 chr17 39097916 39098193 -46340287 + AluSq SINE Alu 1 278 -35 399 41 0 0 chr17 39098741 39098790 -46339690 + (CA)n Simple_repeat Simple_repeat 2 50 0 1794 133 39 14 chr17 39098792 39099077 -46339403 + AluSx SINE Alu 1 292 -20 1653 140 19 8 chr17 39099088 39099352 -46339128 + AluSx SINE Alu 1 267 -45 198 0 0 0 chr17 39099356 39099378 -46339102 + (CA)n Simple_repeat Simple_repeat 1 22 0 2327 92 0 0 chr17 39099979 39100285 -46338195 + AluSg SINE Alu 1 306 -4 5508 73 33 56 chr17 39100370 39101257 -46337223 + SVA Other Other 1 866 -520 237 376 26 17 chr17 39101431 39101548 -46336932 - L2 LINE L2 -535 2779 2662 2239 104 0 16 chr17 39101694 39101831 -46336649 + AluSp SINE Alu 1 139 -174 2295 103 0 0 chr17 39101831 39102141 -46336339 + AluSx SINE Alu 3 312 0 2239 104 0 16 chr17 39102141 39102321 -46336159 + AluSp SINE Alu 139 313 0 364 114 0 29 chr17 39102340 39102410 -46336070 + (GAAA)n Simple_repeat Simple_repeat 4 71 0 2200 98 7 0 chr17 39102483 39102789 -46335691 + AluSq SINE Alu 1 308 -5 1983 134 0 3 chr17 39102814 39103121 -46335359 + AluSx SINE Alu 1 306 -6 1030 128 26 0 chr17 39103250 39103406 -46335074 + L1PA8 LINE L1 6006 6165 -7 2342 83 3 0 chr17 39103408 39103720 -46334760 + AluSp SINE Alu 1 313 0 262 298 18 44 chr17 39105016 39105130 -46333350 + L2 LINE L2 3202 3312 -1 729 94 86 26 chr17 39106338 39106455 -46332025 - FLAM_A SINE Alu -13 129 6 1786 162 0 3 chr17 39106675 39106972 -46331508 - AluJb SINE Alu -12 300 5 1946 116 0 20 chr17 39107222 39107347 -46331133 + AluSx SINE Alu 12 138 -174 2289 64 0 0 chr17 39107347 39107657 -46330823 + AluSc SINE Alu 1 310 0 1946 116 0 20 chr17 39107657 39107823 -46330657 + AluSx SINE Alu 138 298 -14 2304 73 3 3 chr17 39107828 39108130 -46330350 + AluY SINE Alu 1 302 -9 825 185 83 0 chr17 39108130 39108287 -46330193 + AluJb SINE Alu 135 304 -8 234 281 0 0 chr17 39108326 39108383 -46330097 + Charlie8 DNA MER1_type 220 276 -2141 291 348 0 0 chr17 39108625 39108714 -46329766 - L2 LINE L2 0 3272 3184 758 228 118 50 chr17 39108955 39109111 -46329369 + MIR SINE MIR 1 146 -116 2072 116 0 0 chr17 39109111 39109437 -46329043 + AluSx SINE Alu 1 326 0 758 228 118 50 chr17 39109437 39109558 -46328922 + MIR SINE MIR 146 257 -5 209 231 0 62 chr17 39109730 39109795 -46328685 + L2 LINE L2 3203 3263 -9 994 105 0 7 chr17 39110197 39110333 -46328147 + AluSq/x SINE Alu 1 137 -175 2055 108 24 0 chr17 39110333 39110630 -46327850 + AluSx SINE Alu 1 304 -8 220 227 0 15 chr17 39110641 39110707 -46327773 + MIR SINE MIR 48 112 -150 1464 142 27 112 chr17 39114610 39114757 -46323723 + AluYb8 SINE Alu 1 104 -214 2310 86 3 3 chr17 39114757 39115070 -46323410 + AluSp SINE Alu 1 313 0 1464 142 27 112 chr17 39115070 39115260 -46323220 + AluYb8 SINE Alu 104 309 -9 892 154 26 0 chr17 39115260 39115416 -46323064 + AluSq SINE Alu 137 296 -17 316 143 0 0 chr17 39115440 39115496 -46322984 - AluJb SINE Alu -2 300 245 960 158 7 0 chr17 39115496 39115648 -46322832 - AluJb SINE Alu -159 153 1 2263 95 3 0 chr17 39115773 39116078 -46322402 + AluSq SINE Alu 1 306 -7 480 298 8 0 chr17 39117428 39117559 -46320921 - MIR SINE MIR 0 262 131 287 323 121 35 chr17 39117638 39117836 -46320644 + MIR SINE MIR 40 254 -8 191 36 36 0 chr17 39117837 39117865 -46320615 + (TAA)n Simple_repeat Simple_repeat 1 29 0 2397 80 0 3 chr17 39119063 39119377 -46319103 + AluSp SINE Alu 1 313 0 22 56 0 0 chr17 39120562 39120598 -46317882 + GC_rich Low_complexity Low_complexity 1 36 0 182 118 29 0 chr17 39120649 39120683 -46317797 + (CGG)n Simple_repeat Simple_repeat 3 37 0 21 36 0 0 chr17 39120894 39120922 -46317558 + GC_rich Low_complexity Low_complexity 1 28 0 2171 79 27 3 chr17 39121077 39121369 -46317111 + AluSx SINE Alu 1 299 -13 2034 104 3 14 chr17 39121370 39121667 -46316813 + AluSx SINE Alu 1 294 -18 2348 48 20 3 chr17 39121667 39121960 -46316520 + AluY SINE Alu 1 298 -13 1014 169 11 0 chr17 39122238 39122416 -46316064 - AluJo SINE Alu -11 301 122 365 120 0 0 chr17 39122416 39122466 -46316014 - MER66A LTR ERV1 -141 337 288 812 140 49 21 chr17 39122466 39122609 -46315871 - AluJo SINE Alu -165 147 1 1481 80 175 16 chr17 39122679 39122930 -46315550 - AluSc SINE Alu -18 291 1 340 286 6 23 chr17 39123607 39123782 -46314698 + G-rich Low_complexity Low_complexity 6 177 0 22 0 0 0 chr17 39124253 39124275 -46314205 + GC_rich Low_complexity Low_complexity 1 22 0 2184 99 7 3 chr17 39124830 39125134 -46313346 + AluSx SINE Alu 1 305 -7 2375 63 3 31 chr17 39128076 39128394 -46310086 + AluY SINE Alu 1 309 -2 441 286 180 59 chr17 39128856 39129383 -46309097 - L2 LINE L2 0 3272 2675 861 156 0 67 chr17 39129434 39129614 -46308866 + FRAM SINE Alu 8 175 -1 2314 75 0 35 chr17 39130524 39130709 -46307771 - AluSc SINE Alu -2 307 136 2206 84 7 3 chr17 39130709 39131005 -46307475 - AluSp SINE Alu -16 297 1 2314 75 0 35 chr17 39131005 39131137 -46307343 - AluSc SINE Alu -173 136 1 1129 59 0 0 chr17 39131137 39131271 -46307209 - AluSq/x SINE Alu -177 136 3 2059 83 14 17 chr17 39131279 39131434 -46307046 - AluY SINE Alu -20 291 136 2532 47 0 0 chr17 39131434 39131734 -46306746 - AluY SINE Alu -11 300 1 2059 83 14 17 chr17 39131734 39131868 -46306612 - AluY SINE Alu -175 136 3 331 327 49 2 chr17 39132021 39132183 -46306297 + MIR SINE MIR 17 176 -56 217 206 41 27 chr17 39132230 39132303 -46306177 - L2 LINE L2 -194 3078 3005 452 32 0 0 chr17 39132411 39132473 -46306007 + SVA Other Other 1322 1383 -3 480 318 49 15 chr17 39133496 39133701 -46304779 + MIR SINE MIR 34 252 -10 1637 176 16 23 chr17 39134000 39134307 -46304173 + AluJo SINE Alu 1 305 -7 1414 150 105 11 chr17 39134314 39134580 -46303900 + AluJb SINE Alu 1 291 -21 352 253 65 21 chr17 39134580 39134718 -46303762 + MIR3 SINE MIR 35 178 -30 710 96 10 0 chr17 39135169 39135273 -46303207 - L1MB5 LINE L1 0 6174 6070 2452 56 3 0 chr17 39135300 39135604 -46302876 - AluY SINE Alu -6 305 1 1979 107 38 3 chr17 39135837 39136126 -46302354 - AluSq SINE Alu -14 299 1 381 22 0 0 chr17 39136585 39136631 -46301849 + (CA)n Simple_repeat Simple_repeat 2 47 0 288 232 152 40 chr17 39136808 39136907 -46301573 + MIR SINE MIR 44 153 -55 2135 113 3 3 chr17 39137155 39137466 -46301014 + AluSq SINE Alu 1 311 -2 217 219 0 0 chr17 39138451 39138492 -46299988 + (CA)n Simple_repeat Simple_repeat 2 42 0 2349 79 0 0 chr17 39138540 39138845 -46299635 - AluY SINE Alu -6 305 1 477 294 25 25 chr17 39138887 39139047 -46299433 + MIR SINE MIR 2 161 -101 1572 149 84 28 chr17 39139575 39139896 -46298584 - MER44D DNA MER2_type 0 609 1 428 170 252 63 chr17 39140074 39140233 -46298247 - MER5A DNA MER1_type 0 189 1 186 316 72 72 chr17 39141756 39141895 -46296585 + MIR SINE MIR 49 187 -75 1519 237 141 41 chr17 39142089 39142579 -46295901 + MLT1E2 LTR MaLR 2 540 -86 399 195 0 24 chr17 39142620 39142702 -46295778 - MIR SINE MIR -73 189 110 2082 119 7 0 chr17 39143258 39143560 -46294920 - AluSx SINE Alu -6 306 3 2201 96 3 3 chr17 39144381 39144682 -46293798 - AluSx SINE Alu -11 301 1 1322 91 0 0 chr17 39144682 39144857 -46293623 - AluSq SINE Alu -5 308 134 1648 128 0 16 chr17 39144857 39145108 -46293372 - AluSx SINE Alu -12 300 54 819 97 0 32 chr17 39145109 39145233 -46293247 + AluSc SINE Alu 176 295 -14 232 240 274 0 chr17 39145377 39145552 -46292928 + L1ME4a LINE L1 5837 6059 -62 1690 164 7 10 chr17 39145561 39145860 -46292620 - AluJo SINE Alu -14 298 1 227 184 158 66 chr17 39145979 39146055 -46292425 - L2 LINE L2 -3 3269 3187 712 207 24 35 chr17 39146203 39146231 -46292249 - AluJo SINE Alu -144 168 141 1632 143 79 7 chr17 39146231 39146511 -46291969 - AluJb SINE Alu -12 300 1 712 207 24 35 chr17 39146511 39146651 -46291829 - AluJo SINE Alu -171 141 2 2213 81 0 16 chr17 39146657 39146964 -46291516 - AluSc SINE Alu -7 302 1 1876 143 10 19 chr17 39146964 39147277 -46291203 - AluSx SINE Alu -1 311 1 200 176 0 0 chr17 39147992 39148026 -46290454 + CT-rich Low_complexity Low_complexity 2 35 0 2110 101 13 16 chr17 39148786 39149093 -46289387 + AluY SINE Alu 1 306 -5 2355 74 0 0 chr17 39150098 39150394 -46288086 - AluSg SINE Alu -14 296 1 656 234 29 0 chr17 39150600 39150737 -46287743 + MER3 DNA MER1_type 1 141 -68 1068 157 0 17 chr17 39150738 39150910 -46287570 - FRAM SINE Alu -13 163 1 326 167 0 0 chr17 39150914 39150968 -46287512 + MER3 DNA MER1_type 155 208 -1 450 0 0 0 chr17 39151240 39151290 -46287190 + (CA)n Simple_repeat Simple_repeat 2 51 0 1950 88 0 4 chr17 39151342 39151603 -46286877 - AluSg SINE Alu -14 296 37 2164 90 0 17 chr17 39151844 39152145 -46286335 + AluY SINE Alu 1 296 -15 2121 102 24 0 chr17 39152157 39152452 -46286028 + AluSp SINE Alu 1 302 -11 1812 165 0 3 chr17 39152907 39153204 -46285276 - AluJb SINE Alu -16 296 1 2162 88 3 23 chr17 39153208 39153513 -46284967 - AluSq SINE Alu -14 299 1 1596 164 0 58 chr17 39153829 39153966 -46284514 + AluSx SINE Alu 1 144 -168 1751 149 0 4 chr17 39153966 39154241 -46284239 + AluSx SINE Alu 1 274 -38 1596 164 0 58 chr17 39154241 39154413 -46284067 + AluSx SINE Alu 144 292 -20 937 246 12 48 chr17 39154419 39154638 -46283842 + MIR SINE MIR 20 230 -32 1605 168 16 20 chr17 39154638 39154942 -46283538 - AluJb SINE Alu -9 303 1 937 246 12 48 chr17 39154942 39154974 -46283506 + MIR SINE MIR 230 262 0 631 177 33 116 chr17 39154975 39155156 -46283324 + FRAM SINE Alu 1 166 0 347 313 69 77 chr17 39155201 39155434 -46283046 + MIR SINE MIR 20 250 -12 2099 102 0 37 chr17 39155691 39156014 -46282466 + AluSx SINE Alu 1 311 -1 2308 45 0 10 chr17 39156017 39156334 -46282146 + AluY SINE Alu 1 311 0 1237 120 0 0 chr17 39156334 39156509 -46281971 + AluSg/x SINE Alu 134 308 -4 1369 185 3 46 chr17 39156541 39156844 -46281636 + AluJo SINE Alu 1 290 -22 460 238 85 121 chr17 39157529 39157645 -46280835 + L2 LINE L2 2226 2345 -969 1923 108 3 31 chr17 39157645 39157933 -46280547 + AluSx SINE Alu 1 280 -32 414 0 0 0 chr17 39157933 39157979 -46280501 + (CAA)n Simple_repeat Simple_repeat 3 48 0 460 238 85 121 chr17 39157979 39158226 -46280254 + L2 LINE L2 2343 2577 -737 1936 101 0 47 chr17 39158362 39158536 -46279944 - AluSx SINE Alu 0 307 152 1711 100 119 11 chr17 39158536 39158805 -46279675 - AluSp SINE Alu -15 298 1 1936 101 0 47 chr17 39158805 39158948 -46279532 - AluSx SINE Alu -155 152 4 1799 125 3 56 chr17 39158966 39159270 -46279210 - AluSx SINE Alu -24 288 1 1932 142 6 6 chr17 39159307 39159618 -46278862 + AluSx SINE Alu 1 311 -1 634 316 135 28 chr17 39159619 39159974 -46278506 + L2 LINE L2 2916 3308 -5 2144 110 0 7 chr17 39160049 39160348 -46278132 - AluSx SINE Alu -15 297 1 220 291 0 0 chr17 39160506 39160561 -46277919 + (CATATA)n Simple_repeat Simple_repeat 2 56 0 1514 187 20 20 chr17 39160562 39160856 -46277624 - AluJo SINE Alu -16 296 3 1979 124 7 0 chr17 39161066 39161357 -46277123 - AluSx SINE Alu -16 296 4 2079 104 10 0 chr17 39161358 39161647 -46276833 - AluSp SINE Alu -15 298 7 189 0 0 0 chr17 39163103 39163124 -46275356 + (CAG)n Simple_repeat Simple_repeat 2 22 0 2265 86 0 0 chr17 39163291 39163592 -46274888 - AluY SINE Alu -9 302 2 2025 107 16 16 chr17 39163850 39164158 -46274322 + AluSp SINE Alu 1 308 -5 846 240 111 98 chr17 39164198 39164677 -46273803 - L3 LINE CR1 -188 1389 905 2000 129 3 0 chr17 39164870 39165172 -46273308 - AluSg SINE Alu -7 303 1 2313 79 3 3 chr17 39165276 39165581 -46272899 - AluSq SINE Alu -8 305 1 2212 89 0 16 chr17 39165703 39166017 -46272463 - AluSc SINE Alu 0 309 1 413 123 27 41 chr17 39166227 39166300 -46272180 + L1PA8 LINE L1 6086 6157 -15 371 77 0 0 chr17 39166300 39166352 -46272128 - Alu SINE Alu -2 298 247 216 0 0 0 chr17 39166354 39166378 -46272102 + (A)n Simple_repeat Simple_repeat 1 24 0 2404 61 0 0 chr17 39166461 39166756 -46271724 + AluY SINE Alu 1 295 -16 788 166 0 58 chr17 39166894 39167033 -46271447 + FLAM_C SINE Alu 1 131 -2 2221 94 3 0 chr17 39168398 39168697 -46269783 - AluSp SINE Alu -13 300 1 373 290 65 15 chr17 39169778 39169978 -46268502 + L1ME LINE L1 5476 5685 -436 288 239 87 11 chr17 39169986 39170078 -46268402 + L1ME LINE L1 5718 5816 -305 2142 77 0 18 chr17 39170186 39170509 -46267971 + AluY SINE Alu 1 318 0 1611 160 3 7 chr17 39170570 39170863 -46267617 + AluSp SINE Alu 1 292 -21 1393 167 3 58 chr17 39170875 39171032 -46267448 - AluJo SINE Alu -20 292 157 2196 90 3 13 chr17 39171032 39171332 -46267148 - AluSp SINE Alu -16 297 1 1393 167 3 58 chr17 39171332 39171468 -46267012 - AluJo SINE Alu -155 157 15 717 161 8 0 chr17 39171515 39171633 -46266847 + FLAM_C SINE Alu 1 119 -24 207 100 0 0 chr17 39172202 39172232 -46266248 + (TA)n Simple_repeat Simple_repeat 2 31 0 1996 125 0 7 chr17 39172232 39172521 -46265959 - AluSx SINE Alu -25 287 1 1119 137 11 0 chr17 39173237 39173412 -46265068 + AluSg/x SINE Alu 135 311 -1 619 133 13 40 chr17 39173425 39173575 -46264905 + GA-rich Low_complexity Low_complexity 3 148 0 192 229 0 0 chr17 39173937 39173972 -46264508 - MIR SINE MIR -10 252 218 1221 93 0 0 chr17 39174029 39174191 -46264289 - AluSg/x SINE Alu -14 296 135 1296 173 24 8 chr17 39174310 39174558 -46263922 + AluJb SINE Alu 37 288 -24 24 32 0 0 chr17 39174558 39174589 -46263891 + AT_rich Low_complexity Low_complexity 1 31 0 21 36 0 0 chr17 39175382 39175410 -46263070 + AT_rich Low_complexity Low_complexity 1 28 0 2110 116 0 10 chr17 39175797 39176098 -46262382 - AluSx SINE Alu -14 298 1 2069 95 3 7 chr17 39176180 39176500 -46261980 - AluSp SINE Alu 0 319 1 663 145 0 109 chr17 39176504 39176554 -46261926 - FLAM_C SINE Alu -179 123 69 2056 118 3 3 chr17 39176554 39176850 -46261630 - AluSx SINE Alu -16 296 1 663 145 0 109 chr17 39176850 39176937 -46261543 - FLAM_C SINE Alu -233 69 1 1765 112 100 0 chr17 39177383 39177673 -46260807 + AluSq SINE Alu 1 316 0 222 280 147 13 chr17 39178657 39178732 -46259748 - L2 LINE L2 -7 3265 3181 1371 78 0 6 chr17 39178781 39178961 -46259519 - AluSp SINE Alu -133 180 2 1683 142 18 21 chr17 39178988 39179270 -46259210 + AluJo SINE Alu 1 281 -31 412 160 19 66 chr17 39179277 39179383 -46259097 + FLAM_A SINE Alu 42 142 0 1843 145 50 0 chr17 39181624 39181921 -46256559 - AluSx SINE Alu 0 312 1 245 266 78 0 chr17 39181984 39182048 -46256432 - L2 LINE L2 -5 3308 3240 2281 87 6 19 chr17 39182323 39182497 -46255983 - AluSx SINE Alu -5 307 137 2463 81 0 0 chr17 39182497 39182795 -46255685 - AluY SINE Alu -13 298 1 2281 87 6 19 chr17 39182795 39182931 -46255549 - AluSx SINE Alu -175 137 1 879 111 8 0 chr17 39183723 39183849 -46254631 + AluSg/x SINE Alu 178 304 -6 390 42 0 0 chr17 39184566 39184614 -46253866 + (CA)n Simple_repeat Simple_repeat 1 48 0 210 227 23 0 chr17 39184756 39184800 -46253680 + L2 LINE L2 3222 3266 -6 679 282 93 34 chr17 39185488 39185843 -46252637 + L1ME4a LINE L1 5471 5846 -275 2385 103 3 0 chr17 39185846 39186157 -46252323 + AluSp SINE Alu 1 312 -1 1213 200 19 74 chr17 39186206 39186516 -46251964 - AluJb SINE Alu -8 294 2 1139 146 39 10 chr17 39186615 39186840 -46251640 - L1MB3 LINE L1 -34 6149 5936 312 216 0 0 chr17 39186849 39186900 -46251580 - MER66A LTR ERV1 -141 337 287 657 164 0 0 chr17 39186902 39187006 -46251474 - L1MB3 LINE L1 -232 5948 5845 1997 132 0 33 chr17 39187496 39187799 -46250681 + AluSx SINE Alu 1 293 -19 972 102 0 0 chr17 39188011 39188138 -46250342 - AluSp/q SINE Alu -11 302 176 1809 169 13 7 chr17 39188193 39188495 -46249985 + AluJb SINE Alu 1 304 -8 225 272 18 12 chr17 39188658 39188740 -46249740 + MIR SINE MIR 64 148 -62 2033 116 0 4 chr17 39188837 39189114 -46249366 - AluSx SINE Alu -11 301 26 215 150 0 25 chr17 39189183 39189223 -46249257 + (TG)n Simple_repeat Simple_repeat 1 39 0 1846 158 3 3 chr17 39193764 39194083 -46244397 + AluJb SINE Alu 1 319 0 2287 116 0 0 chr17 39194560 39194871 -46243609 + AluSx SINE Alu 2 312 0 1221 129 0 0 chr17 39194885 39195055 -46243425 + AluSc SINE Alu 130 299 -10 324 186 114 0 chr17 39195355 39195425 -46243055 + MIR3 SINE MIR 125 202 -6 732 128 64 86 chr17 39195433 39195620 -46242860 + L1PA15 LINE L1 5974 6156 -9 224 157 39 59 chr17 39195839 39195890 -46242590 - L2 LINE L2 -8 3264 3215 832 153 15 8 chr17 39195936 39196067 -46242413 + AluSq/x SINE Alu 2 133 -179 798 259 47 4 chr17 39196079 39196311 -46242169 + MIR SINE MIR 20 261 -1 1606 154 63 21 chr17 39196495 39196781 -46241699 - AluJo SINE Alu -14 298 1 39 18 0 18 chr17 39196802 39196834 -46241646 + AT_rich Low_complexity Low_complexity 1 33 -23 2012 115 10 34 chr17 39196834 39197130 -46241350 - AluSx SINE Alu -23 289 1 39 18 0 18 chr17 39197130 39197154 -46241326 + AT_rich Low_complexity Low_complexity 33 56 0 679 205 0 0 chr17 39197154 39197271 -46241209 - FLAM_C SINE Alu -25 118 2 2304 76 7 20 chr17 39197284 39197585 -46240895 - AluSp SINE Alu -15 298 2 2263 113 3 3 chr17 39197723 39198034 -46240446 - AluSp SINE Alu -2 311 1 752 145 24 8 chr17 39198512 39198636 -46239844 + FLAM_C SINE Alu 2 127 -16 1131 129 0 35 chr17 39198802 39198973 -46239507 - AluSg/x SINE Alu -15 297 133 849 91 34 17 chr17 39198988 39199164 -46239316 + (TA)n Simple_repeat Simple_repeat 2 180 0 2240 99 7 0 chr17 39199200 39199492 -46238988 - AluSx SINE Alu -18 294 1 1972 156 0 0 chr17 39199654 39199956 -46238524 - AluSg SINE Alu -8 302 1 2201 122 3 0 chr17 39199967 39200263 -46238217 - AluSx SINE Alu -15 297 1 1218 172 68 68 chr17 39200369 39200532 -46237948 - AluJo SINE Alu -16 296 134 2191 92 0 3 chr17 39200532 39200816 -46237664 - AluY SINE Alu -12 299 17 2309 101 0 0 chr17 39200819 39201116 -46237364 - AluSc SINE Alu -12 297 1 1591 186 28 7 chr17 39201118 39201408 -46237072 - AluJo SINE Alu -16 296 1 1218 172 68 68 chr17 39201408 39201533 -46236947 - AluJo SINE Alu -180 132 1 2389 95 0 0 chr17 39201647 39201951 -46236529 + AluSx SINE Alu 1 304 -8 609 206 28 0 chr17 39201975 39202082 -46236398 - FLAM_A SINE Alu -32 110 1 1596 99 0 0 chr17 39202287 39202488 -46235992 + AluSx SINE Alu 1 201 -111 335 96 0 0 chr17 39202488 39202569 -46235911 + AluSx SINE Alu 250 330 0 23 33 0 0 chr17 39202853 39202883 -46235597 + AT_rich Low_complexity Low_complexity 1 30 0 719 204 35 6 chr17 39202992 39203164 -46235316 - MER104 DNA MER2_type -3 177 1 1598 208 0 10 chr17 39203700 39204003 -46234477 - AluJo SINE Alu -12 300 1 313 252 145 38 chr17 39204159 39204290 -46234190 - L2 LINE L2 0 3313 3169 1869 128 43 4 chr17 39204327 39204608 -46233872 + AluJb SINE Alu 18 309 -3 1007 193 0 103 chr17 39205366 39205525 -46232955 + L1M4 LINE L1 4730 4904 -1242 2555 53 3 0 chr17 39205525 39205825 -46232655 - AluY SINE Alu -10 301 1 1851 130 60 17 chr17 39205831 39206130 -46232350 - AluSx SINE Alu 0 312 1 1007 193 0 103 chr17 39206130 39206274 -46232206 + L1M4 LINE L1 4909 5008 -1138 1814 146 35 3 chr17 39206525 39206812 -46231668 + AluSx SINE Alu 1 296 -16 2002 112 30 16 chr17 39206891 39207195 -46231285 + AluSx SINE Alu 1 308 -4 2059 80 84 0 chr17 39207195 39207481 -46230999 + AluSp SINE Alu 1 308 0 249 119 0 0 chr17 39207493 39207535 -46230945 + (TCTA)n Simple_repeat Simple_repeat 1 42 0 1204 188 5 13 chr17 39207535 39207759 -46230721 - AluJb SINE Alu -90 222 1 2441 75 0 0 chr17 39208361 39208656 -46229824 - AluY SINE Alu -16 295 1 1796 183 3 7 chr17 39208767 39209067 -46229413 + AluJb SINE Alu 1 299 -13 817 141 25 0 chr17 39209155 39209276 -46229204 + AluSq/x SINE Alu 1 124 -188 2411 97 0 0 chr17 39209281 39209579 -46228901 + AluSx SINE Alu 1 298 -14 2271 116 0 0 chr17 39209700 39210001 -46228479 + AluSx SINE Alu 1 301 -11 2419 73 0 3 chr17 39210002 39210334 -46228146 + AluY SINE Alu 1 311 0 2268 103 7 0 chr17 39210557 39210848 -46227632 - AluSg SINE Alu -17 293 1 873 223 16 0 chr17 39210901 39211089 -46227391 + AluJo SINE Alu 109 299 -13 241 239 15 15 chr17 39211089 39211156 -46227324 + (TA)n Simple_repeat Simple_repeat 2 68 0 2290 96 7 0 chr17 39211262 39211565 -46226915 - AluSp SINE Alu -8 305 1 1910 132 0 7 chr17 39211825 39212129 -46226351 - AluSc SINE Alu 0 302 1 2104 104 35 3 chr17 39212263 39212550 -46225930 + AluSq SINE Alu 1 296 -17 873 194 0 0 chr17 39212550 39212694 -46225786 - FRAM SINE Alu -32 144 1 392 86 86 14 chr17 39212853 39212923 -46225557 - AluJ/FRAM SINE Alu -4 298 224 2368 98 0 0 chr17 39213684 39213979 -46224501 + AluSg SINE Alu 1 295 -15 21 0 0 0 chr17 39214284 39214305 -46224175 + AT_rich Low_complexity Low_complexity 1 21 0 198 224 318 0 chr17 39214368 39214453 -46224027 - L2 LINE L2 -5 3308 3197 377 164 116 68 chr17 39214686 39214832 -46223648 - L1MC5 LINE L1 -39 7922 7770 712 167 114 0 chr17 39214842 39214974 -46223506 - FRAM SINE Alu -26 150 4 2089 116 7 3 chr17 39214987 39215280 -46223200 - AluSq SINE Alu -19 294 1 840 188 101 61 chr17 39215282 39215559 -46222921 - L1MC5 LINE L1 -444 7517 7230 1920 158 0 7 chr17 39215621 39215918 -46222562 + AluSx SINE Alu 1 295 -17 2127 117 3 13 chr17 39215921 39216228 -46222252 + AluSg SINE Alu 1 304 -6 798 278 92 40 chr17 39216321 39216830 -46221650 - L2 LINE L2 -12 3301 2765 1180 109 0 12 chr17 39216833 39216998 -46221482 - AluSg/x SINE Alu -9 303 141 342 136 10 5 chr17 39216998 39217065 -46221415 - Alu SINE Alu -250 50 6 785 177 0 0 chr17 39217074 39217198 -46221282 - FLAM_C SINE Alu -9 124 1 1792 147 41 20 chr17 39217223 39217515 -46220965 - AluSx SINE Alu -14 298 1 483 110 330 0 chr17 39217647 39217747 -46220733 + FLAM_C SINE Alu 1 133 0 244 290 97 16 chr17 39217836 39217960 -46220520 + MIR3 SINE MIR 2 135 -73 2536 53 0 0 chr17 39218945 39219246 -46219234 + AluY SINE Alu 1 301 -10 1905 89 37 22 chr17 39219255 39219526 -46218954 + AluSg SINE Alu 1 275 -35 2304 81 0 0 chr17 39219555 39219863 -46218617 + AluY SINE Alu 1 308 0 2315 101 7 0 chr17 39219866 39220174 -46218306 + AluSp SINE Alu 3 312 -1 638 260 116 29 chr17 39220801 39221078 -46217402 - L2 LINE L2 -2 3311 3011 1640 157 17 27 chr17 39221087 39221226 -46217254 + AluJb SINE Alu 1 140 -172 2332 98 0 35 chr17 39221226 39221543 -46216937 + AluY SINE Alu 1 306 -5 1640 157 17 27 chr17 39221543 39221697 -46216783 + AluJb SINE Alu 140 291 -21 2157 107 20 0 chr17 39221811 39222109 -46216371 - AluSc SINE Alu -5 304 1 270 0 0 0 chr17 39223209 39223239 -46215241 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 1675 58 53 0 chr17 39223243 39223451 -46215029 - AluSg SINE Alu -37 273 55 4766 136 92 116 chr17 39225104 39226204 -46212276 + pTR5 LTR ERV1 714 1965 -473 2307 101 0 3 chr17 39226204 39226512 -46211968 + AluY SINE Alu 2 308 -3 4766 136 92 116 chr17 39226512 39226975 -46211505 + pTR5 LTR ERV1 1965 2438 0 894 99 0 57 chr17 39227279 39227420 -46211060 - FLAM_C SINE Alu 0 133 1 2342 84 0 16 chr17 39227927 39228235 -46210245 - AluY SINE Alu -7 304 2 733 145 16 16 chr17 39228652 39228776 -46209704 - FLAM_C SINE Alu -9 124 1 2087 141 3 0 chr17 39228778 39229076 -46209404 - AluSx SINE Alu -13 299 1 21 0 0 0 chr17 39229078 39229099 -46209381 + AT_rich Low_complexity Low_complexity 1 21 0 390 279 48 26 chr17 39229136 39229303 -46209177 - MIR SINE MIR -63 145 24 2481 91 3 0 chr17 39229652 39229960 -46208520 + AluSc SINE Alu 1 309 0 606 219 73 0 chr17 39230137 39230260 -46208220 + AluJb SINE Alu 4 135 -177 1410 182 45 17 chr17 39230260 39230551 -46207929 + AluJo SINE Alu 1 299 -13 2105 95 0 15 chr17 39230557 39230831 -46207649 + AluSq SINE Alu 1 270 -43 2287 112 3 0 chr17 39231001 39231304 -46207176 + AluSx SINE Alu 1 304 -8 364 279 88 28 chr17 39231384 39231579 -46206901 + MIR3 SINE MIR 2 212 -50 2293 81 0 0 chr17 39232613 39232908 -46205572 - AluY SINE Alu -4 307 13 2012 85 16 46 chr17 39233321 39233505 -46204975 - AluSp SINE Alu -17 296 123 2448 51 0 0 chr17 39233505 39233800 -46204680 - AluY SINE Alu -15 296 2 2012 85 16 46 chr17 39233800 39233920 -46204560 - AluSp SINE Alu -190 123 1 25 0 0 0 chr17 39234022 39234047 -46204433 + AT_rich Low_complexity Low_complexity 1 25 0 689 138 18 0 chr17 39234397 39234506 -46203974 - AluSq/x SINE Alu -200 112 2 624 80 8 104 chr17 39234615 39234740 -46203740 - L1MA9 LINE L1 -33 6279 6167 1998 130 0 0 chr17 39234750 39235049 -46203431 - AluSx SINE Alu -12 300 2 838 178 0 0 chr17 39235050 39235179 -46203301 - AluJo/FLAM SINE Alu -173 129 1 2220 98 0 0 chr17 39235209 39235504 -46202976 - AluSc SINE Alu -13 296 2 725 247 0 7 chr17 39235504 39235650 -46202830 - AluJb SINE Alu -32 280 136 1724 174 20 0 chr17 39235652 39235946 -46202534 - AluSx SINE Alu -12 300 1 21 36 0 0 chr17 39235961 39235989 -46202491 + AT_rich Low_complexity Low_complexity 1 28 0 644 144 13 157 chr17 39236027 39236180 -46202300 - AluJb SINE Alu -23 289 159 252 202 169 45 chr17 39236309 39236398 -46202082 + MIR3 SINE MIR 94 193 -15 1170 81 17 12 chr17 39236398 39236571 -46201909 + AluSp SINE Alu 124 297 -16 1779 147 125 20 chr17 39236596 39237003 -46201477 - LTR7 LTR ERV1 0 450 1 1111 77 13 26 chr17 39237343 39237363 -46201117 - AluSq SINE Alu -159 154 135 1815 105 49 56 chr17 39237363 39237668 -46200812 - AluY SINE Alu -8 303 1 1111 77 13 26 chr17 39237668 39237803 -46200677 - AluSq SINE Alu -178 135 1 197 301 71 96 chr17 39238018 39238057 -46200423 + L2 LINE L2 2037 2075 -1239 2098 113 0 3 chr17 39238057 39238357 -46200123 - AluSx SINE Alu -12 300 2 197 301 71 96 chr17 39238357 39238381 -46200099 + L2 LINE L2 2075 2098 -1216 1615 167 35 0 chr17 39238381 39238668 -46199812 - AluJb SINE Alu -15 297 1 197 301 71 96 chr17 39238668 39238842 -46199638 + L2 LINE L2 2098 2269 -1045 548 250 0 0 chr17 39239085 39239197 -46199283 - MER81 DNA DNA -1 113 2 921 193 0 6 chr17 39239571 39239737 -46198743 + AluSx SINE Alu 7 171 -141 207 0 0 0 chr17 39239755 39239778 -46198702 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 1559 189 0 20 chr17 39239876 39240178 -46198302 + AluJo SINE Alu 1 296 -16 593 225 104 23 chr17 39240212 39240385 -46198095 - MIR SINE MIR -28 234 48 2057 122 0 13 chr17 39240707 39240841 -46197639 + AluSg SINE Alu 1 135 -175 2227 86 0 29 chr17 39240841 39241154 -46197326 + AluY SINE Alu 1 304 -7 2057 122 0 13 chr17 39241154 39241331 -46197149 + AluSg SINE Alu 135 308 -2 369 143 0 29 chr17 39241414 39241484 -46196996 - L1MC5 LINE L1 -523 7438 7371 3485 84 19 13 chr17 39241484 39241958 -46196522 + LTR15 LTR ERV1 1 477 -16 390 204 131 73 chr17 39241974 39242111 -46196369 - L1MC5 LINE L1 -587 7374 7230 1921 132 3 7 chr17 39242173 39242469 -46196011 + AluSx SINE Alu 1 295 -17 2080 99 0 0 chr17 39242472 39242756 -46195724 + AluSg SINE Alu 1 284 -26 355 138 0 0 chr17 39242769 39242827 -46195653 + Alu SINE Alu 244 301 -1 936 277 96 41 chr17 39242915 39243434 -46195046 - L2 LINE L2 0 3313 2765 1122 124 0 0 chr17 39243437 39243598 -46194882 - AluSg/x SINE Alu -11 301 141 385 118 4 4 chr17 39243598 39243666 -46194814 - Alu SINE Alu -253 50 1 732 205 0 0 chr17 39243675 39243797 -46194683 - FLAM_C SINE Alu -9 124 3 1403 177 42 38 chr17 39243803 39244091 -46194389 - AluSx SINE Alu -23 289 1 1958 158 0 0 chr17 39244201 39244512 -46193968 - AluSx SINE Alu -1 311 1 445 150 170 0 chr17 39244516 39244616 -46193864 - MIR SINE MIR -64 198 82 202 318 0 30 chr17 39244812 39244878 -46193602 - MIR SINE MIR -171 91 28 269 195 0 130 chr17 39244917 39244994 -46193486 + MIR SINE MIR 48 114 -148 1289 93 6 6 chr17 39244996 39245179 -46193301 - AluSc SINE Alu 0 309 127 2298 75 0 28 chr17 39245180 39245500 -46192980 - AluY SINE Alu 0 311 1 266 256 122 11 chr17 39245502 39245592 -46192888 + MIR SINE MIR 104 203 -59 182 307 182 11 chr17 39245793 39245881 -46192599 + MER5A DNA MER1_type 68 170 -19 2171 123 0 0 chr17 39246054 39246363 -46192117 - AluSx SINE Alu -3 309 1 415 271 8 8 chr17 39247469 39247598 -46190882 + MLT1H LTR MaLR 95 223 -326 756 144 16 0 chr17 39248441 39248566 -46189914 + FLAM_C SINE Alu 2 128 -5 7173 56 9 2 chr17 39248597 39249870 -46188610 + L1PA5 LINE L1 4875 6154 0 1760 138 25 4 chr17 39250028 39250324 -46188156 + AluSx SINE Alu 1 302 0 2093 123 10 0 chr17 39250334 39250643 -46187837 + AluSq SINE Alu 1 312 -1 224 377 0 0 chr17 39250651 39250728 -46187752 + L2 LINE L2 353 429 -2885 285 197 0 16 chr17 39251428 39251489 -46186991 + LTR33A LTR ERVL 443 502 -21 501 190 0 0 chr17 39251513 39251592 -46186888 + MER21B LTR ERV1 12 90 -773 21 0 0 0 chr17 39251607 39251628 -46186852 + AT_rich Low_complexity Low_complexity 1 21 0 2236 136 0 27 chr17 39251663 39251791 -46186689 - L1PA14 LINE L1 0 6161 6031 2056 99 27 0 chr17 39251791 39252083 -46186397 - AluSg SINE Alu -10 300 1 2236 136 0 27 chr17 39252083 39252323 -46186157 - L1PA14 LINE L1 -130 6031 5803 1838 234 56 10 chr17 39252338 39252940 -46185540 + MER21B LTR ERV1 22 682 -181 183 324 139 52 chr17 39252953 39253240 -46185240 + L2 LINE L2 2924 3235 -37 994 138 0 12 chr17 39253750 39253910 -46184570 + FRAM SINE Alu 1 156 -20 28 29 0 0 chr17 39253928 39253963 -46184517 + AT_rich Low_complexity Low_complexity 1 35 0 1551 66 15 0 chr17 39253965 39254162 -46184318 + AluY SINE Alu 3 202 -109 1586 122 0 8 chr17 39254267 39254504 -46183976 - AluSx SINE Alu -77 235 1 218 266 38 51 chr17 39254571 39254650 -46183830 + L2 LINE L2 3175 3252 -20 345 317 74 45 chr17 39254758 39255001 -46183479 + MIR SINE MIR 13 262 0 1202 131 0 0 chr17 39255032 39255208 -46183272 - AluSp SINE Alu -11 302 127 180 0 0 0 chr17 39255208 39255228 -46183252 + (TG)n Simple_repeat Simple_repeat 2 21 0 306 197 56 14 chr17 39255232 39255303 -46183177 + L1MC4 LINE L1 1995 2068 -4358 * 382 223 9 23 chr17 39255271 39255379 -46183101 + L1MC4 LINE L1 1995 6983 -1339 207 0 0 0 chr17 39255379 39255402 -46183078 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 886 113 8 0 chr17 39255407 39255531 -46182949 - AluSp SINE Alu -188 125 1 26 30 0 0 chr17 39256193 39256226 -46182254 + AT_rich Low_complexity Low_complexity 1 33 0 2247 74 0 10 chr17 39256229 39256528 -46181952 + AluY SINE Alu 1 296 -15 749 125 0 0 chr17 39257032 39257136 -46181344 + AluSq/x SINE Alu 4 107 -206 810 143 0 15 chr17 39257600 39257733 -46180747 + AluSg/x SINE Alu 168 298 -12 2249 71 10 3 chr17 39257734 39258031 -46180449 + AluSp SINE Alu 3 301 -12 714 284 92 21 chr17 39258680 39258962 -46179518 - L2 LINE L2 -1 3312 3011 1462 155 66 4 chr17 39258971 39259088 -46179392 + AluJb SINE Alu 1 109 -203 195 69 0 0 chr17 39259088 39259117 -46179363 + (CA)n Simple_repeat Simple_repeat 2 30 0 1462 155 66 4 chr17 39259117 39259270 -46179210 + AluJb SINE Alu 109 288 -24 284 95 0 0 chr17 39259271 39259313 -46179167 + L1ME3 LINE L1 6121 6162 0 2013 68 18 35 chr17 39259319 39259877 -46178603 + SVA Other Other 499 1386 0 1529 74 0 15 chr17 39260060 39260263 -46178217 - AluY SINE Alu -13 298 99 1850 180 66 59 chr17 39260263 39260719 -46177761 - LTR2B LTR ERV1 0 490 32 40456 58 30 21 chr17 39260738 39265905 -46172575 - Harlequin LTR ERV1 0 6896 1678 384 42 0 0 chr17 39265905 39265953 -46172527 + L1PA3 LINE L1 6103 6150 -5 40456 58 30 21 chr17 39265953 39266064 -46172416 - Harlequin LTR ERV1 -5218 1678 1570 7328 76 20 98 chr17 39266047 39266153 -46172327 - Harlequin LTR ERV1 -5792 1104 991 * 189 0 0 0 chr17 39266153 39266174 -46172306 + (TG)n Simple_repeat Simple_repeat 2 22 0 7328 76 20 98 chr17 39266174 39267264 -46171216 - Harlequin LTR ERV1 -5905 991 1 1870 189 69 32 chr17 39267265 39267698 -46170782 - LTR2B LTR ERV1 -10 480 32 769 79 0 0 chr17 39267717 39267818 -46170662 - AluY SINE Alu -209 102 2 2117 96 3 7 chr17 39268374 39268677 -46169803 + AluSp SINE Alu 1 302 -11 2112 79 35 0 chr17 39269194 39269484 -46168996 - AluSg SINE Alu -9 301 2 709 146 0 62 chr17 39271831 39271961 -46166519 - FLAM_C SINE Alu -11 122 1 2382 68 0 3 chr17 39272837 39273144 -46165336 - AluY SINE Alu -5 306 1 763 137 16 16 chr17 39273177 39273301 -46165179 - FLAM_C SINE Alu -9 124 1 1948 137 13 0 chr17 39273303 39273603 -46164877 - AluSx SINE Alu -8 304 1 327 332 72 27 chr17 39273664 39273849 -46164631 - MIR3 SINE MIR -63 145 3 803 182 105 42 chr17 39274035 39274321 -46164159 + L1MC5 LINE L1 7624 7927 -34 2083 99 0 7 chr17 39274335 39274628 -46163852 + AluY SINE Alu 3 293 -18 28 0 0 0 chr17 39274631 39274659 -46163821 + AT_rich Low_complexity Low_complexity 1 28 0 2019 96 22 38 chr17 39274832 39275145 -46163335 + AluY SINE Alu 1 308 -3 281 275 25 12 chr17 39275330 39275410 -46163070 + L2 LINE L2 3190 3270 -43 360 250 156 0 chr17 39275642 39275738 -46162742 + L2 LINE L2 3198 3308 -5 268 197 0 0 chr17 39276757 39276823 -46161657 - L1MA9 LINE L1 -19 6293 6228 1944 133 76 3 chr17 39276823 39277139 -46161341 - MER7A DNA MER2_type 0 346 10 297 222 56 133 chr17 39277139 39277319 -46161161 - L1MA9 LINE L1 -93 6219 6054 26 0 0 0 chr17 39277375 39277401 -46161079 + AT_rich Low_complexity Low_complexity 1 26 0 30 0 0 0 chr17 39277498 39277528 -46160952 + AT_rich Low_complexity Low_complexity 1 30 0 1737 168 3 3 chr17 39277535 39277833 -46160647 - AluJb SINE Alu -14 298 1 1783 153 3 7 chr17 39278721 39279021 -46159459 + AluJb SINE Alu 1 299 -13 456 279 93 110 chr17 39279021 39279305 -46159175 - L1ME LINE L1 -371 5750 5462 441 0 0 0 chr17 39279305 39279354 -46159126 + (CA)n Simple_repeat Simple_repeat 2 50 0 456 279 93 110 chr17 39279354 39279549 -46158931 - L1ME LINE L1 -659 5462 5265 771 143 0 34 chr17 39279964 39280083 -46158397 - FLAM_C SINE Alu -27 116 2 1244 145 0 0 chr17 39280099 39280292 -46158188 - AluSg/x SINE Alu -2 310 118 5849 51 1 36 chr17 39280841 39282208 -46156272 - L1PA7 LINE L1 -1 6153 5413 3741 53 11 43 chr17 39281332 39281501 -46156979 - L1PA7 LINE L1 -492 5662 5489 2430 84 0 7 chr17 39281501 39281800 -46156680 - AluY SINE Alu -14 297 1 3741 53 11 43 chr17 39281800 39281823 -46156657 - L1PA7 LINE L1 -665 5489 5467 2291 112 0 3 chr17 39281823 39282128 -46156352 - AluSg SINE Alu -6 304 1 3741 53 11 43 chr17 39282128 39282201 -46156279 - L1PA7 LINE L1 -687 5467 5393 2542 84 0 0 chr17 39282201 39282510 -46155970 - AluY SINE Alu -2 309 1 954 68 0 15 chr17 39282208 39282332 -46156148 - AluY SINE Alu -9 302 179 3741 53 11 43 chr17 39282510 39283059 -46155421 - L1PA7 LINE L1 -761 5393 4875 258 51 0 51 chr17 39284387 39284426 -46154054 - Alu SINE Alu -252 48 12 182 267 0 0 chr17 39284564 39284609 -46153871 + MIR SINE MIR 108 152 -110 699 209 0 0 chr17 39284818 39284952 -46153528 - AluJb SINE Alu -45 267 134 186 43 0 0 chr17 39284953 39284976 -46153504 + (TTTTA)n Simple_repeat Simple_repeat 3 25 0 2665 34 0 0 chr17 39284986 39285278 -46153202 - AluY SINE Alu -19 292 1 1301 200 117 19 chr17 39285289 39285554 -46152926 - AluJo SINE Alu -21 291 1 2213 118 53 6 chr17 39285611 39285967 -46152513 + MER39B LTR ERV1 6 378 -275 483 188 0 0 chr17 39285967 39286052 -46152428 + AluJ/FLAM SINE Alu 2 86 -226 2562 60 0 3 chr17 39286196 39286498 -46151982 - AluY SINE Alu -10 301 1 757 206 94 0 chr17 39286543 39286703 -46151777 + FAM SINE Alu 1 175 0 1374 184 14 11 chr17 39286704 39286987 -46151493 + MER39B LTR ERV1 366 649 -4 820 180 0 0 chr17 39287013 39287152 -46151328 + FLAM_C SINE Alu 1 139 -4 22 0 0 0 chr17 39287295 39287317 -46151163 + AT_rich Low_complexity Low_complexity 1 22 0 660 251 69 5 chr17 39287318 39287521 -46150959 - L2 LINE L2 0 3313 3098 1159 124 0 28 chr17 39287646 39287823 -46150657 - AluSg/x SINE Alu -4 308 137 2050 134 7 7 chr17 39287823 39288130 -46150350 - AluSq SINE Alu -6 307 1 1320 131 0 185 chr17 39288136 39288503 -46149977 - AluJb SINE Alu -11 301 3 326 215 172 0 chr17 39288692 39288785 -46149695 + MIR SINE MIR 29 137 -125 229 284 81 0 chr17 39288978 39289052 -46149428 - MIR SINE MIR -90 172 93 546 237 23 8 chr17 39289989 39290120 -46148360 - FRAM SINE Alu -6 170 38 2052 113 6 52 chr17 39290242 39290569 -46147911 - AluSx SINE Alu 0 312 1 2437 92 0 13 chr17 39290934 39291249 -46147231 - AluSp SINE Alu -2 311 1 461 240 201 59 chr17 39291350 39291708 -46146772 + L2 LINE L2 560 968 -2346 184 279 190 25 chr17 39291712 39291791 -46146689 + L2 LINE L2 1128 1219 -2095 2548 87 28 8 chr17 39291851 39292208 -46146272 - THE1B LTR MaLR 0 364 1 7932 102 6 48 chr17 39292216 39292385 -46146095 - THE1B-int LTR MaLR -9 1571 1397 2381 103 0 7 chr17 39292385 39292687 -46145793 + AluSx SINE Alu 1 300 -12 7932 102 6 48 chr17 39292687 39292825 -46145655 - THE1B-int LTR MaLR -183 1397 1255 2389 101 0 10 chr17 39292825 39293132 -46145348 - AluSx SINE Alu -7 305 2 7932 102 6 48 chr17 39293132 39293917 -46144563 - THE1B-int LTR MaLR -325 1255 439 2380 109 0 0 chr17 39293917 39294221 -46144259 - AluSc SINE Alu -5 304 1 7932 102 6 48 chr17 39294221 39294286 -46144194 - THE1B-int LTR MaLR -1141 439 373 1924 144 17 0 chr17 39294286 39294577 -46143903 - AluSg SINE Alu -14 296 1 7932 102 6 48 chr17 39294577 39294602 -46143878 - THE1B-int LTR MaLR -1207 373 349 2307 100 3 13 chr17 39294602 39294912 -46143568 + AluSg SINE Alu 1 307 -3 1829 162 23 3 chr17 39294917 39295220 -46143260 + AluSq SINE Alu 3 311 -2 7932 102 6 48 chr17 39295220 39295282 -46143198 - THE1B-int LTR MaLR -1148 432 369 2245 114 10 0 chr17 39295290 39295597 -46142883 + AluSp SINE Alu 2 311 -2 1983 124 30 0 chr17 39295614 39295912 -46142568 + AluSp SINE Alu 6 312 -1 2175 105 0 10 chr17 39295958 39296271 -46142209 + AluSg SINE Alu 1 310 0 2108 95 3 20 chr17 39296282 39296588 -46141892 + AluSp SINE Alu 9 309 -4 468 252 16 8 chr17 39296597 39296724 -46141756 - MER33 DNA MER1_type -194 130 3 4881 163 19 44 chr17 39296882 39297914 -46140566 - LTR13 LTR ERVK 0 1007 1 318 178 85 119 chr17 39297917 39298035 -46140445 - MER96B DNA MER1_type? -303 114 1 257 291 28 104 chr17 39298362 39298719 -46139761 - L2 LINE L2 -1 3271 2942 848 82 8 16 chr17 39299276 39299398 -46139082 - AluSp SINE Alu -188 125 5 2422 71 3 3 chr17 39299402 39299697 -46138783 - AluY SINE Alu -12 299 5 2242 97 20 3 chr17 39299701 39299999 -46138481 - AluSx SINE Alu -8 304 2 1096 171 11 0 chr17 39300006 39300187 -46138293 - AluSg/x SINE Alu -13 299 117 1566 155 90 11 chr17 39300420 39300698 -46137782 - AluJb SINE Alu -12 300 1 278 313 42 14 chr17 39300750 39300911 -46137569 - MIR3 SINE MIR -62 146 5 1554 233 0 7 chr17 39301296 39301597 -46136883 + AluJo SINE Alu 1 299 -13 2378 82 3 7 chr17 39302045 39302348 -46136132 - AluY SINE Alu -9 302 1 2371 84 0 10 chr17 39302348 39302645 -46135835 - AluSg SINE Alu -12 298 4 2460 65 0 26 chr17 39302685 39302995 -46135485 - AluY SINE Alu -9 302 1 396 201 104 14 chr17 39304431 39304575 -46133905 + L1MD3 LINE L1 7838 7994 -1 1799 148 3 57 chr17 39305549 39305697 -46132783 + AluJb SINE Alu 2 126 -186 2486 83 3 0 chr17 39305697 39305999 -46132481 + AluSp SINE Alu 1 303 -10 1799 148 3 57 chr17 39305999 39306167 -46132313 + AluJb SINE Alu 126 301 -11 2447 98 0 0 chr17 39306169 39306476 -46132004 + AluSg1 SINE Alu 1 307 -2 2486 74 0 0 chr17 39307563 39307861 -46130619 + AluY SINE Alu 1 298 -13 2176 94 6 50 chr17 39308195 39308513 -46129967 + AluSp SINE Alu 1 304 -9 2285 104 3 0 chr17 39308697 39308994 -46129486 + AluSg SINE Alu 1 298 -12 2290 91 0 7 chr17 39309004 39309290 -46129190 + AluY SINE Alu 1 284 -27 233 233 70 23 chr17 39309326 39309412 -46129068 + L1ME4a LINE L1 5946 6035 -86 1452 213 45 3 chr17 39309412 39309698 -46128782 - AluJb SINE Alu -14 298 1 2205 89 14 7 chr17 39309706 39309998 -46128482 - AluY SINE Alu -17 294 1 288 70 0 0 chr17 39310569 39310612 -46127868 + (GGA)n Simple_repeat Simple_repeat 1 43 0 2003 166 0 0 chr17 39311191 39311492 -46126988 - AluJb SINE Alu -11 301 1 2315 93 0 7 chr17 39312221 39312521 -46125959 + AluSg SINE Alu 1 298 -12 240 317 102 24 chr17 39312604 39312771 -46125709 + MIR SINE MIR 12 191 -71 1878 111 12 0 chr17 39313236 39313488 -46124992 + AluSg SINE Alu 38 292 -18 2468 77 0 3 chr17 39314262 39314561 -46123919 - AluY SINE Alu -13 298 1 245 163 0 0 chr17 39314563 39314606 -46123874 + MIR SINE MIR 65 107 -155 1806 168 0 29 chr17 39314711 39314858 -46123622 + AluJo SINE Alu 1 151 -161 2340 84 3 3 chr17 39314858 39315155 -46123325 + AluSc SINE Alu 1 297 -12 1806 168 0 29 chr17 39315155 39315317 -46123163 + AluJo SINE Alu 151 301 -11 2437 92 0 0 chr17 39315396 39315688 -46122792 + AluSg SINE Alu 1 292 -18 306 331 65 13 chr17 39315724 39315878 -46122602 - L2 LINE L2 -206 3066 2905 1850 181 0 3 chr17 39315917 39316220 -46122260 + AluJb SINE Alu 1 302 -10 2505 85 7 0 chr17 39316220 39316525 -46121955 + AluSg SINE Alu 1 307 -3 365 294 233 45 chr17 39316527 39316698 -46121782 - L2 LINE L2 -495 2819 2681 2435 88 3 0 chr17 39316698 39316995 -46121485 + AluSg SINE Alu 1 298 -12 365 294 233 45 chr17 39316995 39317103 -46121377 - L2 LINE L2 -633 2681 2595 1953 148 0 7 chr17 39317103 39317386 -46121094 + AluJb SINE Alu 1 281 -31 365 294 233 45 chr17 39317386 39317546 -46120934 - L2 LINE L2 -719 2595 2466 1281 168 90 66 chr17 39317546 39317685 -46120795 + MER2 DNA MER2_type 2 136 -208 1536 199 14 20 chr17 39317685 39317982 -46120498 - AluJo SINE Alu -17 295 1 1281 168 90 66 chr17 39317982 39318175 -46120305 + MER2 DNA MER2_type 136 342 -2 365 294 233 45 chr17 39318175 39318484 -46119996 - L2 LINE L2 -848 2466 1928 237 143 14 100 chr17 39318933 39319003 -46119477 + MIR SINE MIR 96 159 -103 1960 169 0 3 chr17 39319006 39319319 -46119161 + AluJb SINE Alu 1 312 0 228 75 0 0 chr17 39319398 39319438 -46119042 - Alu SINE Alu -1 301 262 2547 58 0 3 chr17 39319539 39319833 -46118647 - AluY SINE Alu -18 293 1 25 65 0 0 chr17 39320291 39320337 -46118143 + AT_rich Low_complexity Low_complexity 1 46 0 228 67 0 0 chr17 39322727 39322757 -46115723 + (CAGCC)n Simple_repeat Simple_repeat 3 32 0 1053 117 0 14 chr17 39324523 39324668 -46113812 + FLAM_C SINE Alu 1 143 0 2261 127 0 3 chr17 39325131 39325439 -46113041 + AluSx SINE Alu 1 307 -5 2247 82 7 0 chr17 39325440 39325720 -46112760 + AluSg SINE Alu 22 303 -7 564 328 63 17 chr17 39325856 39326094 -46112386 - MIR SINE MIR -1 261 13 701 160 23 15 chr17 39328503 39328634 -46109846 - FLAM_C SINE Alu 0 133 2 2292 100 3 0 chr17 39328832 39329121 -46109359 + AluSq SINE Alu 1 290 -23 1595 187 20 13 chr17 39329905 39330205 -46108275 + AluSq SINE Alu 1 302 -11 2088 143 7 3 chr17 39330545 39330845 -46107635 - AluSx SINE Alu -10 302 2 1833 138 69 0 chr17 39332280 39332556 -46105924 + AluSg SINE Alu 1 295 -15 186 43 0 0 chr17 39332626 39332649 -46105831 + (TCTG)n Simple_repeat Simple_repeat 2 24 0 1772 159 0 4 chr17 39332649 39332920 -46105560 - AluSx SINE Alu -42 270 1 1662 155 6 73 chr17 39333035 39333214 -46105266 - AluJb SINE Alu -3 309 159 2356 108 3 0 chr17 39333214 39333520 -46104960 - AluSc SINE Alu -2 307 1 1662 155 6 73 chr17 39333520 39333657 -46104823 - AluJb SINE Alu -153 159 14 411 165 216 0 chr17 39333690 39333787 -46104693 - FLAM_A SINE Alu -1 141 24 201 39 0 0 chr17 39333913 39333939 -46104541 + (CA)n Simple_repeat Simple_repeat 2 27 0 201 74 0 0 chr17 39333939 39333966 -46104514 + (TC)n Simple_repeat Simple_repeat 2 28 0 278 353 0 0 chr17 39334751 39334890 -46103590 + (TGG)n Simple_repeat Simple_repeat 1 139 0 1020 181 0 12 chr17 39335324 39335485 -46102995 - AluJo SINE Alu -18 294 134 1595 172 0 15 chr17 39335485 39335753 -46102727 - AluJo SINE Alu -14 298 35 2480 71 3 0 chr17 39335836 39336132 -46102348 + AluSg SINE Alu 1 297 -13 1137 77 14 0 chr17 39336285 39336428 -46102052 - AluSg SINE Alu -148 162 18 1195 134 102 48 chr17 39336445 39336480 -46102000 - Charlie5 DNA MER1_type -45 2579 2547 1736 185 34 0 chr17 39336480 39336778 -46101702 + AluJo SINE Alu 1 308 -4 1195 134 102 48 chr17 39336778 39336803 -46101677 - Charlie5 DNA MER1_type -77 2547 2525 1774 166 10 10 chr17 39336803 39337104 -46101376 - AluJb SINE Alu -11 301 1 1195 134 102 48 chr17 39337104 39337355 -46101125 - Charlie5 DNA MER1_type -99 2525 2250 2348 98 0 0 chr17 39337374 39337690 -46100790 - AluSq SINE Alu 0 313 1 26 50 0 0 chr17 39337720 39337760 -46100720 + AT_rich Low_complexity Low_complexity 1 40 0 701 185 37 0 chr17 39337761 39337896 -46100584 + FLAM_C SINE Alu 2 141 -2 1941 138 10 7 chr17 39337897 39338195 -46100285 - AluSx SINE Alu -13 299 1 196 244 0 0 chr17 39338449 39338494 -46099986 - MIR SINE MIR -110 152 108 1915 131 0 59 chr17 39338633 39338739 -46099741 + AluJo SINE Alu 12 123 -189 2562 57 0 3 chr17 39338739 39339038 -46099442 - AluY SINE Alu -13 298 1 1915 131 0 59 chr17 39339038 39339236 -46099244 + AluJo SINE Alu 123 298 -14 208 321 98 36 chr17 39339420 39339532 -46098948 - MIR SINE MIR -63 145 27 1216 153 205 31 chr17 39339549 39339803 -46098677 - AluJo SINE Alu -12 300 3 448 177 5 177 chr17 39339806 39340015 -46098465 + MER104 DNA MER2_type 5 177 -3 2135 120 3 17 chr17 39340077 39340378 -46098102 - AluSx SINE Alu -15 297 1 225 304 87 9 chr17 39340380 39340495 -46097985 - MIR SINE MIR -65 197 74 2525 73 7 0 chr17 39340504 39340806 -46097674 - AluSp SINE Alu -9 304 1 2014 140 7 13 chr17 39340806 39341106 -46097374 - AluSx SINE Alu -14 298 1 2296 113 3 0 chr17 39341120 39341431 -46097049 - AluSx SINE Alu 0 312 1 495 0 0 0 chr17 39341471 39341526 -46096954 + (TG)n Simple_repeat Simple_repeat 2 56 0 1694 77 3 216 chr17 39341526 39341888 -46096592 - AluSq SINE Alu -28 285 1 570 144 0 0 chr17 39342027 39342117 -46096363 - AluJ/FLAM SINE Alu -210 102 13 231 36 0 0 chr17 39342135 39342163 -46096317 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 1154 103 0 0 chr17 39342163 39342309 -46096171 - AluSg/x SINE Alu -33 279 134 2182 96 34 7 chr17 39342309 39342601 -46095879 - AluSc SINE Alu -9 300 1 1139 111 0 69 chr17 39342632 39342821 -46095659 + AluSp SINE Alu 137 312 -1 22 0 0 0 chr17 39342821 39342843 -46095637 + AT_rich Low_complexity Low_complexity 1 22 0 294 339 87 10 chr17 39342994 39343144 -46095336 - MIR SINE MIR -56 206 47 908 74 8 8 chr17 39343460 39343581 -46094899 - AluSp SINE Alu -188 125 5 2486 67 3 3 chr17 39343585 39343884 -46094596 - AluY SINE Alu -8 303 5 2269 91 20 3 chr17 39343888 39344186 -46094294 - AluSx SINE Alu -8 304 2 1109 166 11 0 chr17 39344193 39344374 -46094106 - AluSg/x SINE Alu -13 299 117 827 171 6 6 chr17 39344877 39345035 -46093445 - AluJb SINE Alu -7 305 148 443 168 48 40 chr17 39345070 39345086 -46093394 - FRAM SINE Alu -136 40 26 249 57 0 0 chr17 39345086 39345121 -46093359 + (TTGG)n Simple_repeat Simple_repeat 2 36 0 443 168 48 40 chr17 39345121 39345229 -46093251 - FRAM SINE Alu -150 26 1 214 322 43 35 chr17 39345271 39345386 -46093094 - L2 LINE L2 -3034 280 165 3261 103 0 4 chr17 39345668 39346152 -46092328 + L1PA8 LINE L1 5668 6149 -23 1088 88 0 6 chr17 39346205 39346386 -46092094 + (GA)n Simple_repeat Simple_repeat 1 180 0 1676 0 0 0 chr17 39346705 39346892 -46091588 - U2 snRNA snRNA -1 187 1 223 316 25 0 chr17 39347901 39347980 -46090500 + L2 LINE L2 3232 3312 -1 304 186 85 119 chr17 39348307 39348425 -46090055 + MER96B DNA MER1_type? 1 114 -303 3283 181 9 32 chr17 39348428 39349104 -46089376 + LTR13 LTR ERVK 1 660 -347 926 177 10 21 chr17 39349254 39349446 -46089034 - LTR13 LTR ERVK -817 190 1 304 186 85 119 chr17 39349449 39349567 -46088913 - MER96B DNA MER1_type? -303 114 1 241 318 54 16 chr17 39349892 39350021 -46088459 - L2 LINE L2 -1 3312 3179 1676 0 0 0 chr17 39350965 39351152 -46087328 + U2 snRNA snRNA 1 187 -1 756 143 18 0 chr17 39351457 39351625 -46086855 + CT-rich Low_complexity Low_complexity 2 172 0 3261 103 0 4 chr17 39351648 39352132 -46086348 - L1PA8 LINE L1 -23 6149 5668 214 322 43 35 chr17 39352416 39352531 -46085949 + L2 LINE L2 165 280 -3034 443 168 48 40 chr17 39352573 39352681 -46085799 + FRAM SINE Alu 1 26 -150 249 57 0 0 chr17 39352681 39352716 -46085764 + (CCAA)n Simple_repeat Simple_repeat 2 36 0 443 168 48 40 chr17 39352716 39352732 -46085748 + FRAM SINE Alu 26 40 0 827 171 6 6 chr17 39352767 39352925 -46085555 + AluJb SINE Alu 148 305 -7 1155 165 0 0 chr17 39353431 39353619 -46084861 + AluSg/x SINE Alu 117 304 -8 2328 68 24 0 chr17 39353620 39353912 -46084568 + AluSx SINE Alu 1 299 -13 2098 92 3 20 chr17 39353922 39354226 -46084254 + AluSp SINE Alu 9 307 -6 494 254 16 0 chr17 39354235 39354361 -46084119 - MER33 DNA MER1_type -194 130 3 4842 163 20 44 chr17 39354519 39355550 -46082930 - LTR13 LTR ERVK 0 1007 1 287 170 94 132 chr17 39355559 39355665 -46082815 + MER96B DNA MER1_type? 310 411 -6 218 248 35 62 chr17 39356234 39356347 -46082133 - L2 LINE L2 -221 3051 2942 848 82 8 16 chr17 39356901 39357023 -46081457 - AluSp SINE Alu -188 125 5 2422 71 3 3 chr17 39357027 39357322 -46081158 - AluY SINE Alu -12 299 5 2253 94 20 3 chr17 39357326 39357624 -46080856 - AluSx SINE Alu -8 304 2 1096 171 11 0 chr17 39357631 39357812 -46080668 - AluSg/x SINE Alu -13 297 115 818 185 158 0 chr17 39358294 39358478 -46080002 - AluJb SINE Alu -13 299 87 2545 90 0 0 chr17 39358559 39358871 -46079609 + AluSp SINE Alu 1 312 -1 2349 94 7 0 chr17 39359898 39360196 -46078284 - AluSp SINE Alu -13 300 1 24 53 0 0 chr17 39360200 39360238 -46078242 + AT_rich Low_complexity Low_complexity 1 38 0 2002 141 3 7 chr17 39360238 39360537 -46077943 + AluSx SINE Alu 1 298 -14 664 200 37 0 chr17 39360538 39360673 -46077807 - FLAM_C SINE Alu -2 141 2 28 48 0 0 chr17 39360674 39360716 -46077764 + AT_rich Low_complexity Low_complexity 1 42 0 2291 193 7 13 chr17 39360773 39361228 -46077252 - LTR13 LTR ERVK -555 452 1 304 186 85 119 chr17 39361231 39361349 -46077131 - MER96B DNA MER1_type? -303 114 1 249 281 31 104 chr17 39361674 39362030 -46076450 - L2 LINE L2 -1 3271 2942 1676 0 0 0 chr17 39362761 39362948 -46075532 + U2 snRNA snRNA 1 187 -1 1052 88 6 0 chr17 39363265 39363436 -46075044 + (TC)n Simple_repeat Simple_repeat 1 172 0 3261 103 0 4 chr17 39363483 39363967 -46074513 - L1PA8 LINE L1 -23 6149 5668 214 322 43 35 chr17 39364250 39364365 -46074115 + L2 LINE L2 165 280 -3034 443 168 48 40 chr17 39364407 39364515 -46073965 + FRAM SINE Alu 1 26 -150 249 57 0 0 chr17 39364515 39364550 -46073930 + (CCAA)n Simple_repeat Simple_repeat 2 36 0 443 168 48 40 chr17 39364550 39364566 -46073914 + FRAM SINE Alu 26 40 0 827 171 6 6 chr17 39364601 39364759 -46073721 + AluJb SINE Alu 148 305 -7 1155 165 0 0 chr17 39365268 39365456 -46073024 + AluSg/x SINE Alu 117 304 -8 2338 68 24 0 chr17 39365457 39365750 -46072730 + AluSx SINE Alu 1 300 -12 2098 92 3 20 chr17 39365760 39366064 -46072416 + AluSp SINE Alu 9 307 -6 494 254 16 0 chr17 39366073 39366199 -46072281 - MER33 DNA MER1_type -194 130 3 3982 173 25 48 chr17 39366357 39367254 -46071226 - LTR13 LTR ERVK 0 1007 132 762 174 0 8 chr17 39368456 39368588 -46069892 + FLAM_A SINE Alu 1 131 -2 224 130 22 0 chr17 39368953 39368999 -46069481 + (TTA)n Simple_repeat Simple_repeat 1 47 0 23 68 0 0 chr17 39369100 39369144 -46069336 + AT_rich Low_complexity Low_complexity 1 44 0 248 298 60 0 chr17 39369456 39369540 -46068940 + L2 LINE L2 2980 3068 -245 210 37 0 0 chr17 39369580 39369607 -46068873 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 862 121 8 0 chr17 39370852 39370984 -46067496 - L1PA16 LINE L1 -9 6157 6025 24 0 0 0 chr17 39371100 39371124 -46067356 + AT_rich Low_complexity Low_complexity 1 24 0 27 0 0 0 chr17 39371583 39371610 -46066870 + AT_rich Low_complexity Low_complexity 1 27 0 251 236 47 95 chr17 39371699 39371847 -46066633 + MIR SINE MIR 66 206 -56 1096 197 139 3 chr17 39371864 39372173 -46066307 - L1ME1 LINE L1 -5 6161 5811 26 30 0 0 chr17 39372173 39372206 -46066274 + AT_rich Low_complexity Low_complexity 1 33 0 2889 17 0 0 chr17 39372253 39372597 -46065883 - L1PA2 LINE L1 -2 6153 5810 266 305 34 62 chr17 39373105 39373282 -46065198 - MIR SINE MIR -15 247 76 287 196 21 113 chr17 39373433 39373487 -46064993 - MER20 DNA MER1_type -47 172 129 1975 68 64 11 chr17 39373487 39373650 -46064830 - AluY SINE Alu -15 296 110 386 20 20 0 chr17 39373650 39373701 -46064779 + (TTTTA)n Simple_repeat Simple_repeat 2 53 0 1975 68 64 11 chr17 39373701 39373818 -46064662 - AluY SINE Alu -201 110 1 287 196 21 113 chr17 39373818 39373860 -46064620 - MER20 DNA MER1_type -90 129 85 29 28 0 0 chr17 39374264 39374300 -46064180 + AT_rich Low_complexity Low_complexity 1 36 0 2352 86 3 0 chr17 39375494 39375786 -46062694 - AluSp SINE Alu -18 295 3 3335 114 106 65 chr17 39376368 39377035 -46061445 - LTR13 LTR ERVK -312 695 1 12770 233 11 5 chr17 39377035 39381448 -46057032 - HERVK13 LTR ERVK 0 8116 3567 32 57 0 0 chr17 39582019 39582072 -45856408 + GC_rich Low_complexity Low_complexity 1 53 0 345 344 76 25 chr17 39582121 39582278 -45856202 - L1MCa LINE L1 -4036 2390 2226 23 33 0 0 chr17 39582956 39582986 -45855494 + GC_rich Low_complexity Low_complexity 1 30 0 351 0 0 0 chr17 39583998 39584037 -45854443 + (A)n Simple_repeat Simple_repeat 1 39 0 389 240 60 10 chr17 39586093 39586193 -45852287 + MIR3 SINE MIR 101 205 -3 2013 179 89 52 chr17 39586604 39587089 -45851391 - MLT1D LTR MaLR 0 505 3 794 278 60 13 chr17 39587107 39587341 -45851139 - MIR SINE MIR -2 260 16 358 295 35 68 chr17 39587895 39588106 -45850374 + MIR SINE MIR 56 258 -4 227 297 62 55 chr17 39588182 39588310 -45850170 + L2 LINE L2 3136 3264 -8 2000 85 11 7 chr17 39588312 39588621 -45849859 + AluSx SINE Alu 1 310 0 309 51 0 0 chr17 39588857 39588896 -45849584 + (CCG)n Simple_repeat Simple_repeat 1 39 0 916 61 15 23 chr17 39589659 39589791 -45848689 + AluSg SINE Alu 1 131 -179 1233 64 0 0 chr17 39589901 39590057 -45848423 + AluSp/q SINE Alu 158 313 0 310 276 60 43 chr17 39590062 39590178 -45848302 + MIR SINE MIR 32 149 -113 2168 95 0 7 chr17 39590847 39591142 -45847338 + AluSx SINE Alu 1 293 -19 318 291 94 17 chr17 39592003 39592120 -45846360 + MIR SINE MIR 19 144 -64 1657 140 16 63 chr17 39592405 39592586 -45845894 - AluSx SINE Alu -11 301 113 2217 102 7 0 chr17 39592586 39592891 -45845589 - AluSc SINE Alu -2 307 1 189 0 0 0 chr17 39592892 39592913 -45845567 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 2143 102 0 0 chr17 39592913 39593196 -45845284 - AluSx SINE Alu -29 283 1 1657 140 16 63 chr17 39593196 39593326 -45845154 - AluSx SINE Alu -197 115 2 824 263 33 4 chr17 39594062 39594294 -45844186 - MIR SINE MIR -11 251 10 335 62 0 0 chr17 39595674 39595722 -45842758 - L1PA8A LINE L1 -343 5788 5741 1241 162 10 0 chr17 39595723 39595950 -45842530 - AluJo SINE Alu 0 312 83 633 320 101 35 chr17 39595950 39596263 -45842217 + L2 LINE L2 2349 2692 -622 2280 93 0 13 chr17 39596263 39596573 -45841907 - AluSg SINE Alu -4 306 1 633 320 101 35 chr17 39596573 39596634 -45841846 + L2 LINE L2 2692 2748 -566 273 262 48 24 chr17 39596640 39596766 -45841714 + L1MB8 LINE L1 5950 6078 -100 455 325 97 50 chr17 39596775 39596885 -45841595 + L2 LINE L2 2827 2930 -383 1704 108 12 4 chr17 39596885 39597134 -45841346 - AluSq SINE Alu -10 303 53 455 325 97 50 chr17 39597134 39597488 -45840992 + L2 LINE L2 2930 3313 0 1958 110 7 20 chr17 39598211 39598496 -45839984 + AluSx SINE Alu 1 283 -29 264 30 0 0 chr17 39598496 39598529 -45839951 + (CAAT)n Simple_repeat Simple_repeat 2 34 0 1958 110 7 20 chr17 39598529 39598543 -45839937 + AluSx SINE Alu 283 296 -16 564 236 177 0 chr17 39598663 39598866 -45839614 + L2 LINE L2 2477 2715 -599 2008 143 0 19 chr17 39598906 39599221 -45839259 + AluSx SINE Alu 1 309 -3 1921 164 7 0 chr17 39599232 39599542 -45838938 + AluSx SINE Alu 1 312 0 1560 208 14 0 chr17 39599552 39599841 -45838639 + AluJb SINE Alu 1 293 -19 2250 91 7 0 chr17 39599847 39600155 -45838325 + AluSp SINE Alu 1 310 -3 402 143 23 160 chr17 39600178 39600251 -45838229 - L1MB8 LINE L1 -53 6125 6044 2228 110 0 0 chr17 39600251 39600551 -45837929 - AluSg SINE Alu -6 304 5 1911 137 65 0 chr17 39600561 39600854 -45837626 - AluSx SINE Alu 0 312 1 402 143 23 160 chr17 39600854 39600944 -45837536 - L1MB8 LINE L1 -144 6034 5975 971 271 176 21 chr17 39600946 39601284 -45837196 + L2 LINE L2 2689 2974 -339 1639 153 3 46 chr17 39601284 39601610 -45836870 - AluSx SINE Alu 0 312 1 971 271 176 21 chr17 39601610 39601823 -45836657 + L2 LINE L2 2974 3313 0 712 157 9 9 chr17 39602033 39602148 -45836332 + FLAM_A SINE Alu 12 126 -16 2300 110 0 0 chr17 39602348 39602656 -45835824 - AluSc SINE Alu 0 309 2 338 261 61 43 chr17 39602991 39603106 -45835374 + MIR SINE MIR 97 213 -49 23 33 0 0 chr17 39603106 39603136 -45835344 + AT_rich Low_complexity Low_complexity 1 30 0 2441 67 0 0 chr17 39603142 39603439 -45835041 + AluY SINE Alu 1 297 -14 234 62 0 0 chr17 39603474 39603506 -45834974 + (ATG)n Simple_repeat Simple_repeat 2 33 0 1954 141 3 0 chr17 39603508 39603799 -45834681 - AluSx SINE Alu -20 292 1 236 385 30 18 chr17 39603885 39604052 -45834428 + L2 LINE L2 2593 2761 -553 772 260 48 0 chr17 39604052 39604260 -45834220 + MIR SINE MIR 1 218 -44 364 312 52 76 chr17 39604405 39604598 -45833882 + L2 LINE L2 2825 3012 -260 2268 107 3 0 chr17 39604598 39604908 -45833572 + AluSx SINE Alu 2 312 0 364 312 52 76 chr17 39604908 39604964 -45833516 + L2 LINE L2 3012 3068 -204 1053 281 0 16 chr17 39604990 39605246 -45833234 + MIR SINE MIR 10 261 -1 246 323 73 48 chr17 39605284 39605408 -45833072 + L2 LINE L2 3124 3250 -22 590 299 37 11 chr17 39605434 39605621 -45832859 - MIR SINE MIR -21 241 50 267 222 133 22 chr17 39605616 39605706 -45832774 + MIR SINE MIR 106 205 -57 * 1698 103 9 0 chr17 39606307 39606540 -45831940 + L1PA10 LINE L1 5924 6158 -10 2061 125 0 3 chr17 39606651 39606977 -45831503 - AluSx SINE Alu 0 312 1 240 379 0 11 chr17 39607131 39607226 -45831254 - MIR SINE MIR -1 261 168 193 119 48 0 chr17 39607237 39607279 -45831201 + (TAA)n Simple_repeat Simple_repeat 1 44 0 212 259 99 25 chr17 39607348 39607429 -45831051 - MIR SINE MIR -101 107 21 234 0 0 0 chr17 39609076 39609102 -45829378 + (A)n Simple_repeat Simple_repeat 1 26 0 234 333 13 22 chr17 39609249 39609390 -45829090 + GA-rich Low_complexity Low_complexity 1 229 0 247 243 0 29 chr17 39609774 39609844 -45828636 + GA-rich Low_complexity Low_complexity 2 69 0 1984 155 3 3 chr17 39609924 39610234 -45828246 + AluJb SINE Alu 1 310 -2 378 298 53 8 chr17 39610260 39610391 -45828089 + MIR SINE MIR 116 252 -10 2381 94 3 0 chr17 39610446 39610755 -45827725 - AluSp SINE Alu -3 310 1 262 194 41 10 chr17 39611473 39611571 -45826909 + GA-rich Low_complexity Low_complexity 1 101 0 236 288 30 0 chr17 39612213 39612279 -45826201 + L2 LINE L2 3205 3272 0 248 220 0 0 chr17 39613641 39613700 -45824780 + (CAGA)n Simple_repeat Simple_repeat 2 60 0 270 0 0 0 chr17 39619343 39619373 -45819107 + (TTTTG)n Simple_repeat Simple_repeat 3 32 0 21 0 0 0 chr17 39620501 39620522 -45817958 + GC_rich Low_complexity Low_complexity 1 21 0 28 19 0 56 chr17 39620549 39620603 -45817877 + GC_rich Low_complexity Low_complexity 1 51 0 334 291 34 83 chr17 39620664 39620835 -45817645 - L1MCa LINE L1 -2862 3564 2226 21 36 0 0 chr17 39621359 39621387 -45817093 + GC_rich Low_complexity Low_complexity 1 28 0 25 31 0 0 chr17 39621836 39621868 -45816612 + GC_rich Low_complexity Low_complexity 1 32 0 222 192 0 0 chr17 39622341 39622393 -45816087 + CT-rich Low_complexity Low_complexity 3 54 0 22 0 0 0 chr17 39623051 39623073 -45815407 + GC_rich Low_complexity Low_complexity 1 22 0 212 221 0 15 chr17 39623744 39623812 -45814668 + GA-rich Low_complexity Low_complexity 1 67 0 211 133 0 22 chr17 39624086 39624131 -45814349 + (TAAA)n Simple_repeat Simple_repeat 3 46 0 333 186 0 0 chr17 39625151 39625221 -45813259 + (CA)n Simple_repeat Simple_repeat 2 71 0 218 303 169 0 chr17 39625412 39625501 -45812979 - L2 LINE L2 -2 3311 3208 373 278 125 7 chr17 39625674 39625818 -45812662 - MIR3 SINE MIR -24 184 24 2490 47 0 0 chr17 39626200 39626496 -45811984 + AluY SINE Alu 1 296 -15 1902 155 0 0 chr17 39626501 39626798 -45811682 + AluJb SINE Alu 1 297 -15 456 225 25 8 chr17 39626800 39626920 -45811560 + MIR SINE MIR 80 201 -61 213 238 0 0 chr17 39627066 39627108 -45811372 + (TGAA)n Simple_repeat Simple_repeat 1 42 0 188 81 0 27 chr17 39629264 39629301 -45809179 + L2 LINE L2 3028 3063 -209 263 68 0 23 chr17 39629407 39629451 -45809029 + FAM SINE Alu 131 173 -2 197 306 16 0 chr17 39629524 39629586 -45808894 + L2 LINE L2 3248 3310 -3 2386 63 0 3 chr17 39630086 39630386 -45808094 - AluSp SINE Alu -14 299 1 184 147 29 0 chr17 39630976 39631010 -45807470 + MIR SINE MIR 120 154 -108 2070 141 3 0 chr17 39631097 39631403 -45807077 - AluSx SINE Alu -5 307 1 262 264 109 23 chr17 39631529 39631655 -45806825 + MIR SINE MIR 23 151 -63 250 33 0 0 chr17 39632202 39632232 -45806248 + (TTTC)n Simple_repeat Simple_repeat 2 88 0 1997 100 14 0 chr17 39632232 39632511 -45805969 - AluSx SINE Alu -1 312 1 832 159 0 8 chr17 39632512 39632644 -45805836 - FLAM_A SINE Alu -2 131 1 490 200 50 0 chr17 39632713 39632813 -45805667 - MIR SINE MIR -60 148 44 664 223 101 42 chr17 39632882 39633120 -45805360 - MIR SINE MIR 0 262 11 205 339 45 9 chr17 39633380 39633492 -45804988 + L2 LINE L2 2944 3059 -213 217 348 116 14 chr17 39633535 39633673 -45804807 + MIR SINE MIR 32 183 -79 24 67 0 0 chr17 39633782 39633827 -45804653 + GC_rich Low_complexity Low_complexity 1 45 0 33 0 0 0 chr17 39633986 39634019 -45804461 + GC_rich Low_complexity Low_complexity 1 33 0 185 56 0 56 chr17 39634160 39634196 -45804284 + (CGGGG)n Simple_repeat Simple_repeat 1 34 0 625 285 32 0 chr17 39635555 39635713 -45802767 - MIR SINE MIR -80 182 20 548 346 51 0 chr17 39635734 39635951 -45802529 - MIR SINE MIR -7 255 28 2306 99 0 3 chr17 39636313 39636616 -45801864 + AluSq SINE Alu 1 302 -11 486 262 141 37 chr17 39636754 39636945 -45801535 - MIR SINE MIR 0 262 52 370 250 293 21 chr17 39638289 39638477 -45800003 + MIR SINE MIR 13 251 -11 2073 117 0 28 chr17 39638607 39638924 -45799556 + AluJb SINE Alu 1 308 -4 447 252 77 0 chr17 39638982 39639137 -45799343 + L1ME3 LINE L1 5988 6154 -8 235 262 16 0 chr17 39639184 39639245 -45799235 + (TGAA)n Simple_repeat Simple_repeat 1 62 0 372 265 157 24 chr17 39639690 39639856 -45798624 - MIR SINE MIR -54 208 21 336 259 11 63 chr17 39640636 39640825 -45797655 + CT-rich Low_complexity Low_complexity 2 180 0 219 246 18 0 chr17 39642969 39643026 -45795454 + GA-rich Low_complexity Low_complexity 2 59 0 525 286 45 30 chr17 39644876 39645075 -45793405 + MIR3 SINE MIR 7 208 0 268 302 66 19 chr17 39646513 39646619 -45791861 - L2 LINE L2 -3 3269 3159 1778 154 0 47 chr17 39646642 39646788 -45791692 + AluJo SINE Alu 1 152 -160 2345 84 3 0 chr17 39646788 39647085 -45791395 + AluSp SINE Alu 1 298 -15 1778 154 0 47 chr17 39647085 39647257 -45791223 + AluJo SINE Alu 152 304 -8 240 185 0 0 chr17 39649996 39650050 -45788430 + GA-rich Low_complexity Low_complexity 3 56 0 2147 135 0 0 chr17 39650915 39651226 -45787254 + AluSx SINE Alu 1 311 -1 212 268 56 28 chr17 39651413 39651484 -45786996 - MIR SINE MIR -92 116 44 396 367 226 14 chr17 39653855 39654405 -45784075 + L2 LINE L2 2154 2819 -495 691 232 179 0 chr17 39654643 39654850 -45783630 + MIR SINE MIR 6 249 -13 1270 211 124 0 chr17 39654863 39655129 -45783351 + AluJo SINE Alu 3 301 -1 384 332 61 70 chr17 39655787 39656130 -45782350 + L2 LINE L2 2928 3267 -5 340 243 84 19 chr17 39656241 39656348 -45782132 - MIR SINE MIR -62 146 33 251 200 0 0 chr17 39657078 39657123 -45781357 + AluYb8 SINE Alu 134 178 -130 942 103 37 0 chr17 39657334 39657470 -45781010 + FAM SINE Alu 32 172 -13 526 259 44 7 chr17 39657639 39657774 -45780706 - MIR SINE MIR -50 212 73 186 346 153 30 chr17 39658001 39658203 -45780277 - L2 LINE L2 -209 3063 2837 1376 222 168 13 chr17 39658532 39659236 -45779244 - L2 LINE L2 -19 3294 2482 580 263 115 0 chr17 39659798 39660021 -45778459 - MIR SINE MIR 0 262 16 309 286 53 70 chr17 39660382 39660553 -45777927 - MIR SINE MIR -18 244 77 1653 103 34 89 chr17 39660578 39660870 -45777610 + AluJo SINE Alu 24 299 -13 361 294 29 0 chr17 39661292 39661394 -45777086 - MIR SINE MIR -119 143 39 1871 129 0 7 chr17 39661466 39661744 -45776736 - AluSx SINE Alu -7 305 30 406 259 65 77 chr17 39661856 39661884 -45776596 - MIR SINE MIR -88 174 147 2206 123 3 0 chr17 39661884 39662192 -45776288 - AluSx SINE Alu -3 309 1 313 105 0 35 chr17 39662200 39662249 -45776231 - L1MB4 LINE L1 0 6180 6132 1822 171 3 0 chr17 39662249 39662553 -45775927 - AluJb SINE Alu -7 305 1 406 259 65 77 chr17 39662560 39662692 -45775788 - MIR SINE MIR -122 140 7 2329 74 3 0 chr17 39662921 39663220 -45775260 + AluSc SINE Alu 2 301 -8 1840 137 13 43 chr17 39663863 39664004 -45774476 + AluJo SINE Alu 1 145 -167 2432 60 0 13 chr17 39664004 39664318 -45774162 + AluY SINE Alu 1 310 -1 1840 137 13 43 chr17 39664318 39664475 -45774005 + AluJo SINE Alu 145 290 -22 281 324 90 0 chr17 39664515 39664626 -45773854 - MIR SINE MIR -72 136 16 283 292 11 34 chr17 39664915 39665093 -45773387 + GA-rich Low_complexity Low_complexity 1 174 0 1484 221 107 16 chr17 39665156 39665585 -45772895 + L1MC4a LINE L1 5481 5960 -1848 2313 106 3 0 chr17 39665585 39665896 -45772584 + AluSx SINE Alu 1 312 0 1484 221 107 16 chr17 39665896 39665950 -45772530 + L1MC4a LINE L1 5960 6008 -1800 503 145 0 0 chr17 39665964 39666040 -45772440 + AluJ/FLAM SINE Alu 15 90 -222 1367 217 94 8 chr17 39666067 39666449 -45772031 + MLT1C LTR MaLR 1 415 -52 1904 131 3 23 chr17 39666525 39666830 -45771650 + AluJo SINE Alu 1 299 -13 2239 73 3 20 chr17 39667567 39667867 -45770613 - AluY SINE Alu -16 295 1 294 241 8 0 chr17 39668048 39668118 -45770362 + MIR SINE MIR 91 148 -60 862 300 166 13 chr17 39668279 39668929 -45769551 - L2 LINE L2 0 3313 2553 279 340 34 48 chr17 39669890 39670037 -45768443 - MIR SINE MIR -116 146 2 351 96 0 0 chr17 39670146 39670198 -45768282 + (TTCA)n Simple_repeat Simple_repeat 1 52 0 215 209 0 0 chr17 39670199 39670242 -45768238 - L2 LINE L2 -14 3258 3216 982 196 0 0 chr17 39670253 39670421 -45768059 + FRAM SINE Alu 1 166 -10 1888 164 7 0 chr17 39671178 39671483 -45766997 - AluJo SINE Alu -5 307 1 187 339 0 0 chr17 39671816 39671872 -45766608 - MIR SINE MIR -125 83 28 2282 97 0 3 chr17 39673242 39673540 -45764940 + AluSx SINE Alu 1 297 -15 260 340 48 34 chr17 39676588 39676735 -45761745 + MIR SINE MIR 100 248 -14 242 306 74 16 chr17 39677668 39677789 -45760691 + MIR SINE MIR 18 145 -63 225 186 0 0 chr17 39677973 39678016 -45760464 + L3 LINE CR1 1420 1462 -115 22 0 0 0 chr17 39679465 39679487 -45758993 + AT_rich Low_complexity Low_complexity 1 22 0 216 200 18 0 chr17 39679978 39680033 -45758447 + (CCTG)n Simple_repeat Simple_repeat 4 59 0 358 279 184 7 chr17 39680069 39680216 -45758264 + MIR SINE MIR 56 228 -34 422 260 93 20 chr17 39680473 39680623 -45757857 - MIR3 SINE MIR -14 194 34 200 257 28 83 chr17 39684142 39684251 -45754229 + G-rich Low_complexity Low_complexity 6 108 0 2291 87 6 6 chr17 39685061 39685373 -45753107 - AluSp SINE Alu -1 312 1 216 287 86 0 chr17 39685384 39685486 -45752994 - MIR SINE MIR -67 141 20 392 244 0 39 chr17 39687290 39687418 -45751062 - L1MC4 LINE L1 -1339 6983 1995 255 358 70 26 chr17 39687423 39687652 -45750828 - L2 LINE L2 -612 2702 2464 312 27 0 0 chr17 39688763 39688800 -45749680 + (CA)n Simple_repeat Simple_repeat 1 37 0 447 265 103 49 chr17 39689610 39689814 -45748666 + MIR SINE MIR 34 248 -14 2424 77 3 3 chr17 39690384 39690697 -45747783 - AluSp SINE Alu 0 313 1 2068 149 3 0 chr17 39690725 39691033 -45747447 - AluSg SINE Alu -1 309 1 462 118 13 0 chr17 39691033 39691109 -45747371 + MER69 DNA AcHobo 2448 2524 -2 606 249 87 65 chr17 39691129 39691302 -45747178 - MIR SINE MIR -12 250 69 2427 67 0 0 chr17 39691302 39691600 -45746880 - AluY SINE Alu -13 298 1 606 249 87 65 chr17 39691600 39691655 -45746825 - MIR SINE MIR -193 69 17 536 71 10 31 chr17 39691890 39691988 -45746492 + MER53 DNA DNA 5 100 -89 475 102 71 0 chr17 39691908 39692006 -45746474 - MER53 DNA DNA -12 177 73 * 2091 118 0 3 chr17 39692219 39692516 -45745964 + AluSp SINE Alu 1 296 -17 189 74 0 0 chr17 39693035 39693062 -45745418 + (GGA)n Simple_repeat Simple_repeat 3 29 0 22 80 0 0 chr17 39693180 39693230 -45745250 + GC_rich Low_complexity Low_complexity 1 50 0 443 257 176 45 chr17 39694246 39694468 -45744012 - MIR SINE MIR -1 261 11 1198 154 30 5 chr17 39695148 39695349 -45743131 + AluJb SINE Alu 86 291 -21 347 283 246 0 chr17 39695768 39695906 -45742574 - MIR SINE MIR -13 249 78 219 333 53 0 chr17 39696715 39696790 -45741690 - MIR SINE MIR -151 111 33 225 94 0 0 chr17 39697151 39697183 -45741297 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 2135 93 7 0 chr17 39697335 39697625 -45740855 + AluSg SINE Alu 1 292 -18 364 330 168 10 chr17 39698005 39698214 -45740266 + MIR SINE MIR 2 243 -19 340 278 60 30 chr17 39700427 39700560 -45737920 + MIR SINE MIR 16 152 -56 2343 75 3 3 chr17 39700688 39700983 -45737497 + AluSp SINE Alu 1 295 -18 246 367 0 0 chr17 39700988 39701067 -45737413 - MIR3 SINE MIR -41 167 89 286 188 72 0 chr17 39701554 39701623 -45736857 - MER91A DNA MER1_type 0 196 123 338 338 88 14 chr17 39701651 39701799 -45736681 - MER91A DNA MER1_type -37 159 1 520 311 49 15 chr17 39701801 39702004 -45736476 - MIR SINE MIR -24 238 34 1068 238 70 0 chr17 39703613 39703857 -45734623 + MIR SINE MIR 2 262 0 1902 130 38 0 chr17 39703877 39704169 -45734311 - AluSq SINE Alu -8 305 3 2028 137 7 0 chr17 39704171 39704463 -45734017 - AluSx SINE Alu -18 294 1 610 295 119 1 chr17 39704582 39704811 -45733669 + MIR SINE MIR 10 262 0 1704 243 26 0 chr17 39705672 39706092 -45732388 + L1ME2 LINE L1 5697 6127 -37 2270 109 0 0 chr17 39706092 39706396 -45732084 - AluSc SINE Alu -5 304 1 596 103 0 0 chr17 39706415 39706493 -45731987 - AluS SINE Alu -234 78 1 1339 107 0 0 chr17 39706504 39706711 -45731769 - AluSg/x SINE Alu 0 312 114 653 157 0 0 chr17 39706711 39706813 -45731667 + AluJo/FRAM SINE Alu 194 295 -17 1857 124 8 53 chr17 39706813 39707168 -45731312 - Tigger2a DNA MER2_type -95 339 1 1842 164 6 6 chr17 39707209 39707520 -45730960 - AluSx SINE Alu -1 311 1 2142 87 10 7 chr17 39707593 39707891 -45730589 + AluSp SINE Alu 1 299 -14 1367 119 5 5 chr17 39708143 39708337 -45730143 + AluSp SINE Alu 1 194 -119 525 120 0 0 chr17 39708338 39708430 -45730050 + (TA)n Simple_repeat Simple_repeat 2 93 0 409 286 18 65 chr17 39708432 39708692 -45729788 - L1MC4a LINE L1 -1949 5859 5611 249 33 0 0 chr17 39708692 39708722 -45729758 + (TG)n Simple_repeat Simple_repeat 2 31 0 409 286 18 65 chr17 39708722 39708737 -45729743 - L1MC4a LINE L1 -2197 5611 5597 2104 108 0 10 chr17 39708739 39709035 -45729445 - AluSc SINE Alu -16 293 1 194 239 209 0 chr17 39709097 39709164 -45729316 + L2 LINE L2 3186 3266 -6 548 44 0 0 chr17 39709244 39709312 -45729168 - AluSp/q SINE Alu -14 299 232 809 98 0 9 chr17 39709313 39709425 -45729055 - AluSp SINE Alu -202 111 1 233 275 88 0 chr17 39709447 39709527 -45728953 + L2 LINE L2 3227 3313 0 1755 171 3 3 chr17 39709911 39710203 -45728277 + AluJb SINE Alu 1 292 -20 2251 79 26 3 chr17 39710368 39710672 -45727808 - AluSp SINE Alu -2 311 1 271 248 71 97 chr17 39711450 39711563 -45726917 - L2 LINE L2 -1 3312 3203 584 279 165 25 chr17 39711671 39711993 -45726487 - L2 LINE L2 -436 2878 2512 580 268 154 5 chr17 39712946 39713166 -45725314 - MIR SINE MIR -3 259 7 181 269 19 0 chr17 39713170 39713222 -45725258 - L2 LINE L2 -346 2967 2915 1442 163 57 0 chr17 39713494 39713739 -45724741 + AluJb SINE Alu 46 304 -8 2116 107 13 0 chr17 39713740 39714040 -45724440 + AluSp SINE Alu 2 305 -8 2131 103 10 3 chr17 39714275 39714575 -45723905 + AluSx SINE Alu 1 302 -10 1949 157 0 7 chr17 39714576 39714882 -45723598 + AluJb SINE Alu 1 304 -8 1034 143 70 105 chr17 39715149 39715407 -45723073 + MIR SINE MIR 14 262 0 299 246 106 91 chr17 39715429 39715566 -45722914 - L1ME LINE L1 -346 5775 5633 2387 80 0 0 chr17 39715566 39715868 -45722612 - AluSc SINE Alu -5 304 3 299 246 106 91 chr17 39715868 39715929 -45722551 - L1ME LINE L1 -488 5633 5574 266 272 130 0 chr17 39717716 39717808 -45720672 + MIR SINE MIR 118 221 -41 368 264 76 103 chr17 39718380 39718591 -45719889 - L1ME4a LINE L1 0 6823 6608 279 0 0 0 chr17 39718591 39718622 -45719858 + (CA)n Simple_repeat Simple_repeat 2 32 0 1926 137 7 0 chr17 39718628 39718912 -45719568 - AluSx SINE Alu -26 286 1 368 264 76 103 chr17 39718912 39719061 -45719419 - L1ME4a LINE L1 -220 6603 1765 1129 126 0 0 chr17 39719318 39719469 -45719011 + AluSx SINE Alu 3 153 -159 301 290 114 98 chr17 39719469 39719724 -45718756 - L1MC4a LINE L1 -1911 5897 5639 2301 101 3 0 chr17 39719779 39720087 -45718393 + AluSq SINE Alu 1 309 -4 280 238 12 38 chr17 39720449 39720529 -45717951 + MIR SINE MIR 111 188 -74 194 288 0 0 chr17 39720987 39721046 -45717434 - L2 LINE L2 -223 3049 2991 183 313 0 0 chr17 39721325 39721373 -45717107 - MIR SINE MIR -6 256 209 2250 98 0 0 chr17 39721450 39721747 -45716733 - AluSc SINE Alu -12 297 1 1512 153 55 25 chr17 39721773 39722048 -45716432 - AluJb SINE Alu -28 284 2 2207 99 3 29 chr17 39722059 39722372 -45716108 - AluSx SINE Alu -6 306 2 213 333 0 0 chr17 39722401 39722479 -45716001 - L2 LINE L2 -298 2974 2897 208 238 244 24 chr17 39722474 39722569 -45715911 + MER5B DNA MER1_type 12 136 -53 * 1306 160 142 59 chr17 39722574 39722684 -45715796 + MER47A DNA MER2_type 1 100 -2223 1722 137 4 0 chr17 39722684 39722975 -45715505 - AluSp SINE Alu 0 313 43 1306 160 142 59 chr17 39722975 39723020 -45715460 + MER47A DNA MER2_type 100 140 -2183 1789 171 10 0 chr17 39723020 39723325 -45715155 + AluJo SINE Alu 1 308 -4 1306 160 142 59 chr17 39723325 39723506 -45714974 + MER47A DNA MER2_type 140 366 0 1910 96 31 34 chr17 39723528 39723819 -45714661 - AluSg SINE Alu -18 292 3 1371 106 45 0 chr17 39724927 39725071 -45713409 - AluSg/x SINE Alu -22 288 131 2181 81 39 0 chr17 39725071 39725356 -45713124 - AluSg SINE Alu -14 296 1 1371 106 45 0 chr17 39725356 39725409 -45713071 - AluSg/x SINE Alu -179 131 82 1963 136 9 25 chr17 39726850 39727167 -45711313 + AluJo SINE Alu 1 312 0 340 393 25 5 chr17 39731567 39731768 -45706712 + MIR SINE MIR 9 213 -49 795 222 127 0 chr17 39733918 39734107 -45704373 + MIR SINE MIR 18 230 -32 354 326 35 7 chr17 39734310 39734454 -45704026 + MIR SINE MIR 36 183 -79 216 399 52 0 chr17 39735383 39735556 -45702924 - L3b LINE CR1 -141 1442 1261 2272 100 33 0 chr17 39736217 39736517 -45701963 - AluSx SINE Alu -2 310 1 377 280 180 45 chr17 39737452 39737652 -45700828 + MIR SINE MIR 7 233 -29 378 296 68 6 chr17 39737943 39738119 -45700361 + L2 LINE L2 2020 2206 -1108 1806 148 7 39 chr17 39738130 39738435 -45700045 - AluJb SINE Alu -17 295 1 712 266 93 13 chr17 39738516 39738668 -45699812 + MIR SINE MIR 2 140 -122 1335 168 133 38 chr17 39738668 39738782 -45699698 + LTR54B LTR ERV1 2 104 -394 2239 104 3 0 chr17 39738782 39739071 -45699409 - AluSp SINE Alu -17 296 7 1335 168 133 38 chr17 39739071 39739208 -45699272 + LTR54B LTR ERV1 104 227 -271 2633 63 0 19 chr17 39739208 39739525 -45698955 + AluY SINE Alu 1 311 0 1335 168 133 38 chr17 39739525 39739725 -45698755 + LTR54B LTR ERV1 227 497 -1 712 266 93 13 chr17 39739725 39739809 -45698671 + MIR SINE MIR 140 257 -5 327 258 115 53 chr17 39739839 39740048 -45698432 + L2 LINE L2 2523 2744 -570 2184 104 4 0 chr17 39740066 39740374 -45698106 + AluSg SINE Alu 1 309 0 244 146 146 0 chr17 39740771 39740819 -45697661 + L2 LINE L2 3237 3291 -22 2443 93 3 3 chr17 39741113 39741423 -45697057 + AluSx SINE Alu 2 311 -1 2221 107 0 46 chr17 39742465 39742791 -45695689 + AluY SINE Alu 1 311 0 2270 104 10 0 chr17 39743525 39743824 -45694656 - AluSp SINE Alu -10 303 2 1510 163 57 0 chr17 39743825 39744070 -45694410 - AluJb SINE Alu -8 304 46 567 264 154 5 chr17 39744398 39744618 -45693862 + MIR SINE MIR 7 259 -3 549 276 165 25 chr17 39745572 39745894 -45692586 + L2 LINE L2 2512 2878 -436 256 221 77 96 chr17 39746011 39746115 -45692365 + L2 LINE L2 3170 3271 -1 2413 84 3 3 chr17 39746893 39747191 -45691289 + AluSp SINE Alu 1 298 -15 684 251 79 20 chr17 39747271 39747474 -45691006 - MER58C DNA MER1_type 0 215 1 1439 168 4 22 chr17 39747638 39747870 -45690610 + AluJo SINE Alu 6 233 -79 263 122 0 0 chr17 39747871 39747912 -45690568 - MADE1 DNA Mariner -38 42 2 * 395 160 27 0 chr17 39747912 39747975 -45690505 + AluJo SINE Alu 233 297 -5 1477 194 48 31 chr17 39748079 39748373 -45690107 - AluJo SINE Alu -13 299 1 730 206 0 0 chr17 39748421 39748552 -45689928 + FLAM_A SINE Alu 1 131 -2 1103 144 5 0 chr17 39748674 39750167 -45688313 + ALR/Alpha Satellite centromeric 1 1500 -48 1140 156 7 1 chr17 39751382 39760827 -45677653 + ALR/Alpha Satellite centromeric 1 9509 -24 280 81 0 0 chr17 39760927 39760964 -45677516 - Alu SINE Alu -262 41 5 378 289 86 10 chr17 39761031 39761228 -45677252 + L1ME1 LINE L1 5879 6090 -76 279 286 143 17 chr17 39761373 39761492 -45676988 - L2 LINE L2 0 3272 3139 1932 151 3 24 chr17 39761559 39761857 -45676623 - AluJb SINE Alu -20 292 1 2012 151 3 3 chr17 39762550 39762861 -45675619 - AluJo SINE Alu -1 311 1 289 295 10 19 chr17 39763938 39764062 -45674418 - MIR SINE MIR -72 136 36 1779 130 45 55 chr17 39764443 39764751 -45673729 - AluJb SINE Alu -7 305 1 236 177 81 16 chr17 39764795 39764857 -45673623 - MIR SINE MIR -61 147 82 328 239 137 17 chr17 39766324 39766441 -45672039 - MIR SINE MIR -62 146 16 189 107 0 0 chr17 39766441 39766469 -45672011 + (T)n Simple_repeat Simple_repeat 1 28 0 1863 88 42 0 chr17 39766469 39766707 -45671773 - AluSq SINE Alu -65 248 1 257 279 72 45 chr17 39767913 39768024 -45670456 - MIR3 SINE MIR -6 202 89 2638 128 7 24 chr17 39768079 39768531 -45669949 - L1MB7 LINE L1 -20 6164 5721 180 196 39 20 chr17 39769503 39769554 -45668926 - MIR SINE MIR -10 252 201 2362 99 0 0 chr17 39769601 39769893 -45668587 + AluSc SINE Alu 1 292 -17 215 59 0 29 chr17 39770773 39770807 -45667673 + (TG)n Simple_repeat Simple_repeat 2 34 0 572 218 115 6 chr17 39770807 39770956 -45667524 - FRAM SINE Alu -143 169 1 22 0 0 0 chr17 39772025 39772047 -45666433 + AT_rich Low_complexity Low_complexity 1 22 0 186 147 88 0 chr17 39775106 39775140 -45663340 - MIR SINE MIR -26 236 200 2525 76 3 0 chr17 39775953 39776255 -45662225 - AluSq SINE Alu -10 303 1 207 0 0 0 chr17 39776261 39776284 -45662196 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1019 76 0 0 chr17 39776284 39776403 -45662077 - AluSq/x SINE Alu -191 121 3 225 0 0 0 chr17 39776717 39776742 -45661738 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 2282 120 0 0 chr17 39778600 39778900 -45659580 - AluSx SINE Alu -12 300 1 490 301 96 13 chr17 39779231 39779470 -45659010 - L2 LINE L2 0 3272 3014 422 254 121 6 chr17 39779682 39779847 -45658633 + MER5A DNA MER1_type 3 186 -3 543 306 48 48 chr17 39779988 39780223 -45658257 + L1ME1 LINE L1 5875 6112 -54 2246 109 3 3 chr17 39780223 39780525 -45657955 + AluSg SINE Alu 1 302 -8 543 306 48 48 chr17 39780525 39780580 -45657900 + L1ME1 LINE L1 6111 6165 -1 2229 119 0 16 chr17 39780595 39780906 -45657574 + AluSg SINE Alu 1 306 -4 1526 215 20 18 chr17 39780912 39781312 -45657168 + L1M4 LINE L1 4794 5194 -952 2248 93 0 66 chr17 39781320 39781653 -45656827 + AluSp SINE Alu 1 311 -2 1879 189 0 3 chr17 39781659 39781961 -45656519 + AluJb SINE Alu 1 301 -11 1424 169 4 35 chr17 39781964 39782219 -45656261 + AluSx SINE Alu 1 247 -65 2384 92 7 0 chr17 39782319 39782623 -45655857 - AluSp SINE Alu -7 306 1 195 129 0 0 chr17 39782823 39782854 -45655626 + (A)n Simple_repeat Simple_repeat 1 31 0 1208 191 47 0 chr17 39784882 39785097 -45653383 - AluJo SINE Alu -9 303 79 2604 71 3 0 chr17 39785191 39785501 -45652979 - AluSp SINE Alu -2 311 1 610 294 20 7 chr17 39785959 39786105 -45652375 + MIR3 SINE MIR 16 163 -45 22 0 0 0 chr17 39786521 39786543 -45651937 + AT_rich Low_complexity Low_complexity 1 22 0 392 194 19 0 chr17 39786688 39786796 -45651684 + CT-rich Low_complexity Low_complexity 2 111 0 185 214 95 48 chr17 39787958 39788042 -45650438 - MIR SINE MIR -67 141 54 1988 142 38 0 chr17 39788151 39788439 -45650041 + AluSx SINE Alu 1 299 -13 244 307 121 52 chr17 39788955 39789186 -45649294 + L2 LINE L2 2691 2937 -377 1944 164 0 26 chr17 39789218 39789529 -45648951 + AluJb SINE Alu 1 303 -9 226 204 61 0 chr17 39789904 39789953 -45648527 - MIR SINE MIR -17 245 194 308 305 91 1 chr17 39790143 39790281 -45648199 + MIR SINE MIR 25 172 -64 1323 121 0 0 chr17 39790284 39790457 -45648023 + AluSg/x SINE Alu 125 297 -15 195 320 40 13 chr17 39790481 39790556 -45647924 + MIR SINE MIR 186 262 0 1227 242 91 18 chr17 39792118 39792503 -45645977 - MER113 DNA MER1_type? 0 521 109 753 243 159 4 chr17 39792541 39792767 -45645713 - MIR SINE MIR 0 262 2 2014 110 43 4 chr17 39793205 39793486 -45644994 - AluJb SINE Alu -20 292 1 606 77 0 0 chr17 39796781 39796859 -45641621 - AluJ/FRAM SINE Alu -9 303 226 2456 86 0 0 chr17 39797745 39798049 -45640431 - AluSx SINE Alu -8 304 1 2304 76 3 3 chr17 39798649 39798962 -45639518 + AluSp SINE Alu 1 313 0 36 40 0 0 chr17 39799040 39799090 -45639390 + AT_rich Low_complexity Low_complexity 1 50 0 677 167 25 25 chr17 39799099 39799219 -45639261 - FLAM_A SINE Alu -13 120 1 1353 155 9 18 chr17 39799566 39799785 -45638695 - AluJo SINE Alu -95 217 1 2419 83 7 0 chr17 39800030 39800330 -45638150 + AluSp SINE Alu 1 302 -11 1371 95 0 0 chr17 39800330 39800499 -45637981 + AluSg/x SINE Alu 134 302 -10 2015 134 3 29 chr17 39801207 39801521 -45636959 - AluJb SINE Alu -6 306 1 192 274 16 16 chr17 39801624 39801686 -45636794 + MIR SINE MIR 141 202 -60 290 171 0 13 chr17 39805015 39805091 -45633389 + (TG)n Simple_repeat Simple_repeat 2 76 0 199 284 216 0 chr17 39805175 39805291 -45633189 + MIR3 SINE MIR 43 183 -25 204 329 0 0 chr17 39805614 39805693 -45632787 + G-rich Low_complexity Low_complexity 1 79 0 1861 88 32 4 chr17 39806956 39807206 -45631274 + AluSx SINE Alu 39 295 -17 2268 99 13 0 chr17 39807562 39807865 -45630615 + AluSp SINE Alu 1 307 -6 244 321 22 95 chr17 39807914 39808051 -45630429 - MER91A DNA MER1_type -40 156 30 259 278 10 62 chr17 39809642 39809739 -45628741 + MIR SINE MIR 58 149 -59 277 254 154 9 chr17 39810452 39810562 -45627918 + MIR SINE MIR 16 141 -67 1217 188 114 111 chr17 39810654 39810794 -45627686 - L1MC5 LINE L1 -60 7901 7763 1669 157 68 20 chr17 39810794 39811087 -45627393 - AluJo SINE Alu -5 307 1 1217 188 114 111 chr17 39811087 39811110 -45627370 - L1MC5 LINE L1 -198 7763 7742 586 94 0 0 chr17 39811110 39811195 -45627285 + L1PA16 LINE L1 6082 6166 0 1217 188 114 111 chr17 39811195 39811643 -45626837 - L1MC5 LINE L1 -219 7742 7287 1557 132 0 9 chr17 39811778 39812006 -45626474 + AluSq SINE Alu 1 226 -87 937 107 14 0 chr17 39862006 39862146 -45576334 + AluSp/q SINE Alu 161 302 -11 2431 54 0 0 chr17 39862477 39862774 -45575706 + AluY SINE Alu 1 297 -14 361 188 245 0 chr17 39862782 39862918 -45575562 + MIR3 SINE MIR 32 206 -2 2037 112 3 0 chr17 39863670 39863964 -45574516 - AluSq SINE Alu -16 297 3 504 148 11 23 chr17 39863964 39864052 -45574428 - AluJo/FRAM SINE Alu -17 295 209 1490 107 4 76 chr17 39864052 39864314 -45574166 - AluJo SINE Alu -69 243 1 747 166 21 201 chr17 39864394 39864677 -45573803 - MIR SINE MIR 0 262 31 246 154 29 154 chr17 39864740 39864787 -45573693 - L1MC5 LINE L1 -36 7925 7896 2238 106 0 0 chr17 39864787 39865088 -45573392 + AluSx SINE Alu 3 303 -9 246 154 29 154 chr17 39865088 39865144 -45573336 - L1MC5 LINE L1 -65 7896 7835 1887 120 0 31 chr17 39865589 39865909 -45572571 + AluSx SINE Alu 1 311 0 559 234 269 11 chr17 39865942 39866117 -45572363 - MIR SINE MIR 0 262 43 2853 91 41 2 chr17 39866442 39866859 -45571621 + L1MA4A LINE L1 5866 6298 -5 2207 164 27 38 chr17 39867092 39867567 -45570913 - L1ME2 LINE L1 -2 6162 5693 2763 85 42 7 chr17 39867568 39867978 -45570502 - L1MC3 LINE L1 0 7785 7362 580 173 7 17 chr17 39867979 39868125 -45570355 - L1ME2 LINE L1 -460 5702 5561 521 270 31 6 chr17 39868123 39868286 -45570194 - L1M4 LINE L1 -3025 3121 2955 * 659 216 163 7 chr17 39868463 39868616 -45569864 - MER5A DNA MER1_type -2 187 11 197 332 145 33 chr17 39868660 39868874 -45569606 - L2 LINE L2 -466 2848 2611 395 280 72 24 chr17 39868938 39869063 -45569417 - MER5A DNA MER1_type 0 189 59 348 24 0 0 chr17 39869125 39869166 -45569314 + (CA)n Simple_repeat Simple_repeat 2 42 0 2292 81 0 0 chr17 39869343 39869640 -45568840 + AluY SINE Alu 1 297 -14 532 351 56 36 chr17 39869772 39870162 -45568318 - L2 LINE L2 -493 2821 2424 218 289 195 21 chr17 39870199 39870389 -45568091 - L2 LINE L2 -1048 2266 2044 2459 49 3 0 chr17 39870762 39871067 -45567413 + AluY SINE Alu 1 306 -5 222 217 83 0 chr17 39871790 39871850 -45566630 - MIR SINE MIR 0 262 198 854 73 0 0 chr17 39871962 39872072 -45566408 - MER41C LTR ERV1 0 554 445 1432 169 103 15 chr17 39872707 39873038 -45565442 - L1MB7 LINE L1 0 6184 5825 733 126 0 34 chr17 39873040 39873159 -45565321 - FLAM_A SINE Alu 0 142 28 243 0 0 0 chr17 39873182 39873209 -45565271 + (A)n Simple_repeat Simple_repeat 1 27 0 906 107 29 14 chr17 39873215 39873355 -45565125 + AluJb SINE Alu 161 302 -10 638 209 131 5 chr17 39873358 39873549 -45564931 - L1MB7 LINE L1 -373 5793 5579 543 165 84 26 chr17 39873681 39873836 -45564644 - MLT1E LTR MaLR -369 198 38 1451 188 11 0 chr17 39873857 39874123 -45564357 - L1MB7 LINE L1 -597 5587 5319 268 289 0 0 chr17 39874208 39874284 -45564196 - L1MB7 LINE L1 -1014 5132 5057 580 244 99 45 chr17 39874284 39874485 -45563995 - MIR SINE MIR -31 231 20 207 167 0 0 chr17 39875288 39875330 -45563150 + CT-rich Low_complexity Low_complexity 3 44 0 319 301 151 30 chr17 39875436 39875768 -45562712 - L2 LINE L2 -910 2404 2033 202 71 0 0 chr17 39875871 39875899 -45562581 + (TTTC)n Simple_repeat Simple_repeat 1 28 0 696 153 7 14 chr17 39875899 39876043 -45562437 + CT-rich Low_complexity Low_complexity 1 143 0 1734 154 31 7 chr17 39876065 39876358 -45562122 - AluJb SINE Alu -12 300 1 2081 124 0 0 chr17 39876618 39876916 -45561564 - AluSx SINE Alu -14 298 1 446 346 105 12 chr17 39876921 39877253 -45561227 + L2 LINE L2 2910 3272 0 2295 94 0 0 chr17 39877332 39877631 -45560849 - AluSq SINE Alu -14 299 1 261 0 0 0 chr17 39878625 39878654 -45559826 + (TG)n Simple_repeat Simple_repeat 1 29 0 2064 93 10 0 chr17 39879336 39879625 -45558855 - AluSg SINE Alu -18 292 1 529 86 0 0 chr17 39879875 39879945 -45558535 - AluJ/FRAM SINE Alu -25 287 218 2215 99 0 3 chr17 39880056 39880368 -45558112 + AluSx SINE Alu 1 311 -1 777 112 8 16 chr17 39880588 39880713 -45557767 + AluSg/x SINE Alu 186 309 -1 1276 265 23 64 chr17 39881226 39881503 -45556977 + L2 LINE L2 2895 3149 -164 1755 98 39 0 chr17 39881503 39881758 -45556722 - AluSp SINE Alu -9 304 40 1276 265 23 64 chr17 39881758 39881917 -45556563 + L2 LINE L2 3149 3313 0 1486 162 42 32 chr17 39881967 39882115 -45556365 + MER58B DNA MER1_type 28 173 -2247 1788 150 3 16 chr17 39882115 39882422 -45556058 + AluSg SINE Alu 1 303 -7 1486 162 42 32 chr17 39882422 39882583 -45555897 + MER58B DNA MER1_type 173 341 0 721 119 28 84 chr17 39884053 39884087 -45554393 - L1M3 LINE L1 -360 5823 5789 2105 127 0 0 chr17 39884087 39884395 -45554085 + AluSx SINE Alu 1 308 -4 721 119 28 84 chr17 39884395 39884503 -45553977 - L1M3 LINE L1 -394 5789 5689 2098 99 0 0 chr17 39884560 39884871 -45553609 - AluSx SINE Alu 0 311 1 2248 116 0 0 chr17 39886432 39886734 -45551746 - AluSc SINE Alu -7 302 1 1953 140 3 47 chr17 39886865 39887186 -45551294 - AluSx SINE Alu -5 307 1 1736 246 48 40 chr17 39887442 39888566 -45549914 - L1ME3 LINE L1 0 6170 4957 2400 100 0 0 chr17 39888567 39888867 -45549613 - AluSx SINE Alu -12 300 1 990 192 28 0 chr17 39888869 39889051 -45549429 - AluJo SINE Alu -8 304 118 563 288 45 11 chr17 39889155 39889422 -45549058 + L1MEc LINE L1 1791 2066 -4330 455 283 64 0 chr17 39889416 39889589 -45548891 + L1MEc LINE L1 2568 2751 -3464 * 206 174 22 0 chr17 39891353 39891399 -45547081 + A-rich Low_complexity Low_complexity 1 47 0 1980 93 62 3 chr17 39891631 39891920 -45546560 - MER41A LTR ERV1 -248 306 1 217 333 89 15 chr17 39891959 39892094 -45546386 + L2 LINE L2 2943 3087 -185 1217 143 5 11 chr17 39892218 39892407 -45546073 + AluJb SINE Alu 114 301 -11 261 258 76 0 chr17 39892409 39892475 -45546005 + L2 LINE L2 3200 3270 -2 290 65 0 22 chr17 39892642 39892688 -45545792 + (TCTA)n Simple_repeat Simple_repeat 2 46 0 1598 193 0 44 chr17 39893256 39893572 -45544908 + AluJb SINE Alu 1 302 -10 2072 122 0 48 chr17 39893575 39893887 -45544593 + AluSx SINE Alu 1 297 -15 2412 103 0 0 chr17 39893889 39894201 -45544279 + AluSq SINE Alu 1 312 -1 180 306 126 27 chr17 39894352 39894463 -45544017 + L2 LINE L2 2940 3061 -252 543 222 99 6 chr17 39894521 39894585 -45543895 + MER5B DNA MER1_type 2 59 -119 2296 108 0 0 chr17 39894585 39894882 -45543598 + AluSx SINE Alu 1 297 -15 543 222 99 6 chr17 39894882 39894979 -45543501 + MER5B DNA MER1_type 59 178 0 1212 94 0 25 chr17 39895111 39895271 -45543209 - AluSg/x SINE Alu -19 293 138 462 319 111 60 chr17 39895275 39895613 -45542867 + L2 LINE L2 1832 2151 -1163 1727 147 41 3 chr17 39895613 39895906 -45542574 - AluJo SINE Alu -8 304 1 462 319 111 60 chr17 39895906 39896188 -45542292 + L2 LINE L2 2151 2484 -830 2449 97 0 0 chr17 39896332 39896640 -45541840 + AluSx SINE Alu 1 308 -4 1191 109 0 0 chr17 39896640 39896796 -45541684 + AluSx SINE Alu 1 156 -156 2030 107 0 4 chr17 39896844 39897137 -45541343 + AluSg SINE Alu 22 313 0 1297 105 0 0 chr17 39897137 39897309 -45541171 + AluSq SINE Alu 131 302 -11 219 350 88 21 chr17 39897492 39897686 -45540794 + L2 LINE L2 2858 3064 -208 595 203 59 0 chr17 39898167 39898285 -45540195 - MIR3 SINE MIR -12 196 72 927 137 0 0 chr17 39898753 39898877 -45539603 + FLAM_C SINE Alu 1 124 -19 406 245 16 49 chr17 39899590 39899853 -45538627 + (CTGGGG)n Simple_repeat Simple_repeat 1 254 0 191 89 0 71 chr17 39899865 39899921 -45538559 + (CGGGG)n Simple_repeat Simple_repeat 2 53 0 760 154 97 80 chr17 39900629 39900714 -45537766 - MER45A DNA AcHobo -1403 178 96 2129 96 24 10 chr17 39900714 39901007 -45537473 + AluSq SINE Alu 1 297 -16 760 154 97 80 chr17 39901007 39901096 -45537384 - MER45A DNA AcHobo -1485 96 1 2271 118 7 0 chr17 39901338 39901642 -45536838 - AluSx SINE Alu -6 306 1 472 265 68 31 chr17 39901844 39902006 -45536474 - MIR3 SINE MIR -39 169 2 867 142 0 40 chr17 39902071 39902219 -45536261 + FLAM_C SINE Alu 1 142 -1 2061 131 35 35 chr17 39902334 39902709 -45535771 - THE1C LTR MaLR 0 375 1 467 77 0 0 chr17 39902887 39902952 -45535528 + LTR47A LTR ERVL 325 389 -63 1542 119 5 0 chr17 39902985 39903195 -45535285 - AluSq SINE Alu 0 313 103 527 308 93 14 chr17 39904132 39904346 -45534134 - L3 LINE CR1 -56 1521 1291 230 389 9 0 chr17 39904366 39904474 -45534006 - L3 LINE CR1 -413 1164 1056 664 241 69 34 chr17 39905359 39905458 -45533022 + L1ME LINE L1 4984 5078 -1068 1775 194 3 10 chr17 39905458 39905762 -45532718 - AluJo SINE Alu -9 303 2 664 241 69 34 chr17 39905762 39905924 -45532556 + L1ME LINE L1 5078 5254 -892 1138 123 0 13 chr17 39905932 39906087 -45532393 + AluSx SINE Alu 1 153 -159 1224 199 20 76 chr17 39906099 39906157 -45532323 + L1ME LINE L1 5272 5332 -830 2242 112 23 0 chr17 39906157 39906462 -45532018 + AluSx SINE Alu 1 312 0 1224 199 20 76 chr17 39906462 39906796 -45531684 + L1ME LINE L1 5332 5642 -520 311 179 0 132 chr17 39906838 39906944 -45531536 - L1MC4 LINE L1 -1339 6703 6612 306 226 9 66 chr17 39906926 39907032 -45531448 - L1MC4 LINE L1 -1339 6703 6604 * 418 113 57 40 chr17 39907117 39907294 -45531186 + (TA)n Simple_repeat Simple_repeat 1 180 0 316 287 62 39 chr17 39907904 39908033 -45530447 + L1ME3A LINE L1 6037 6168 -2 2472 73 13 0 chr17 39909562 39909863 -45528617 + AluY SINE Alu 1 305 -6 2051 164 0 0 chr17 39909941 39910246 -45528234 + AluJo SINE Alu 1 305 -7 991 128 6 32 chr17 39910305 39910461 -45528019 + AluJb SINE Alu 152 303 -9 2481 70 3 0 chr17 39911131 39911429 -45527051 - AluSp SINE Alu -14 299 1 2292 91 7 29 chr17 39911773 39912082 -45526398 + AluSx SINE Alu 1 302 -10 180 0 0 0 chr17 39912083 39912103 -45526377 + (TGAA)n Simple_repeat Simple_repeat 1 20 0 1904 82 3 64 chr17 39912221 39912503 -45525977 - AluSp SINE Alu -48 265 1 1308 161 0 36 chr17 39912550 39912773 -45525707 - AluJb SINE Alu -30 282 68 7729 128 124 33 chr17 39912776 39913398 -45525082 - pTR5 LTR ERV1 0 2438 1874 3640 47 2 5 chr17 39913398 39913847 -45524633 + LTR7 LTR ERV1 1 448 -2 7729 128 124 33 chr17 39913847 39914773 -45523707 - pTR5 LTR ERV1 -564 1874 749 452 136 0 0 chr17 39914773 39914839 -45523641 - AluJb SINE Alu -235 77 12 354 255 28 57 chr17 39914888 39914994 -45523486 - MIR SINE MIR -88 120 18 361 269 43 43 chr17 39915313 39915454 -45523026 + L1ME LINE L1 5505 5645 -525 2251 117 0 10 chr17 39915525 39915825 -45522655 - AluSx SINE Alu -15 297 1 755 229 148 0 chr17 39915825 39916035 -45522445 + MER58B DNA MER1_type 77 317 -24 256 246 43 72 chr17 39916057 39916090 -45522390 + L1ME LINE L1 5663 5695 -475 1884 152 9 25 chr17 39916090 39916268 -45522212 - AluJb SINE Alu -1 311 139 2386 111 0 0 chr17 39916268 39916574 -45521906 - AluSx SINE Alu -6